BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008374
(568 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 179/341 (52%), Gaps = 26/341 (7%)
Query: 214 EPHHNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNT 273
+P +LG+L+ F +EL+ A++NF LG GGFG VYKG + D T
Sbjct: 17 DPEVHLGQLK------RFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-------ADGT 63
Query: 274 QIAVKKFSRDSIKS-KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLE 332
+AVK+ + + + F E+ +I G+C + LLVY +M NGS+
Sbjct: 64 LVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
Query: 333 KYLYGTSE-QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARL 391
L E Q L+W R +I G A + YL + D K++HRD+KA+NILLD +F A +
Sbjct: 124 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 183
Query: 392 GDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
GDFGLA+ ++ + H V GT+G++APE TGK++ ++DVFG+G ++LE++ G
Sbjct: 184 GDFGLAKLMDYK----DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 452 RSPGNMIP-HQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHP 510
+ ++ L+DWV L +E ++ VD L N +E ++L+ + L C+
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 511 IASERPKTEDILQIISGTSTVPYVPQ------FKPAFTWPS 545
ERPK ++++++ G + F+ F +P+
Sbjct: 300 SPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPT 340
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 170/317 (53%), Gaps = 20/317 (6%)
Query: 214 EPHHNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNT 273
+P +LG+L+ F +EL+ A++NF LG GGFG VYKG + D
Sbjct: 9 DPEVHLGQLK------RFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-------ADGX 55
Query: 274 QIAVKKFSRDSIKS-KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLE 332
+AVK+ + + + F E+ +I G+C + LLVY +M NGS+
Sbjct: 56 LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 333 KYLYGTSE-QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARL 391
L E Q L+W R +I G A + YL + D K++HRD+KA+NILLD +F A +
Sbjct: 116 SCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175
Query: 392 GDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
GDFGLA+ ++ + H V G +G++APE TGK++ ++DVFG+G ++LE++ G
Sbjct: 176 GDFGLAKLMDYKDX----HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 452 RSPGNMIP-HQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHP 510
+ ++ L+DWV L +E ++ VD L N +E ++L+ + L C+
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 511 IASERPKTEDILQIISG 527
ERPK ++++++ G
Sbjct: 292 SPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 154/290 (53%), Gaps = 17/290 (5%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAE 294
+L++ATNNF +G G FG VYKG++ D ++A+K+ + +S + +F E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-------DGAKVALKRRTPESSQGIEEFETE 85
Query: 295 LAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS-EQVTLNWNHRYKIL 353
+ + G+C E+ +++L+Y +M NG+L+++LYG+ ++++W R +I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
G A ++YL + + ++HRD+K+ NILLD +F ++ DFG+++ + H
Sbjct: 146 IGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT---HLXX 199
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP-GNMIPHQQHAYTLVDWVW 472
V GT+GY+ PE F G+ T +SDV+ FG V+ EV+C RS +P + L +W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM--VNLAEWAV 257
Query: 473 MLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDIL 522
H G ++ VD L + ++ + C + +RP D+L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 154/290 (53%), Gaps = 17/290 (5%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAE 294
+L++ATNNF +G G FG VYKG++ D ++A+K+ + +S + +F E
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-------DGAKVALKRRTPESSQGIEEFETE 85
Query: 295 LAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS-EQVTLNWNHRYKIL 353
+ + G+C E+ +++L+Y +M NG+L+++LYG+ ++++W R +I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
G A ++YL + + ++HRD+K+ NILLD +F ++ DFG+++ + H
Sbjct: 146 IGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT---HLXX 199
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP-GNMIPHQQHAYTLVDWVW 472
V GT+GY+ PE F G+ T +SDV+ FG V+ EV+C RS +P + L +W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM--VNLAEWAV 257
Query: 473 MLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDIL 522
H G ++ VD L + ++ + C + +RP D+L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 157/306 (51%), Gaps = 30/306 (9%)
Query: 231 FKYKELKKATNNFHE------SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR-- 282
F + ELK TNNF E ++GEGGFG+VYKG +V+NT +AVKK +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG--------YVNNTTVAVKKLAAMV 66
Query: 283 --DSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE 340
+ + K F E+ ++ G+ + L LVY +MPNGSL L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 341 QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI 400
L+W+ R KI G A+ + +L + +HRD+K++NILLD F A++ DFGLARA
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 401 ENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPH 460
E + +V GT Y+APE G+ TP+SD++ FG V+LE++ G + H
Sbjct: 184 EKFAQTVMXSRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EH 237
Query: 461 QQHAYTLVDWVWMLHREGHIQDAVDQRLN-INSVVDEAKRLLLLGLACSHPIASERPKTE 519
++ L + E I+D +D+++N +S EA + + C H ++RP +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEA--MYSVASQCLHEKKNKRPDIK 295
Query: 520 DILQII 525
+ Q++
Sbjct: 296 KVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 157/306 (51%), Gaps = 30/306 (9%)
Query: 231 FKYKELKKATNNFHE------SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR-- 282
F + ELK TNNF E ++GEGGFG+VYKG +V+NT +AVKK +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG--------YVNNTTVAVKKLAAMV 66
Query: 283 --DSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE 340
+ + K F E+ ++ G+ + L LVY +MPNGSL L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 126
Query: 341 QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI 400
L+W+ R KI G A+ + +L + +HRD+K++NILLD F A++ DFGLARA
Sbjct: 127 TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 183
Query: 401 ENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPH 460
E + +V GT Y+APE G+ TP+SD++ FG V+LE++ G + H
Sbjct: 184 EKFAQTVMXXRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EH 237
Query: 461 QQHAYTLVDWVWMLHREGHIQDAVDQRLN-INSVVDEAKRLLLLGLACSHPIASERPKTE 519
++ L + E I+D +D+++N +S EA + + C H ++RP +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEA--MYSVASQCLHEKKNKRPDIK 295
Query: 520 DILQII 525
+ Q++
Sbjct: 296 KVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 156/306 (50%), Gaps = 30/306 (9%)
Query: 231 FKYKELKKATNNFHE------SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR-- 282
F + ELK TNNF E ++GEGGFG+VYKG +V+NT +AVKK +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG--------YVNNTTVAVKKLAAMV 60
Query: 283 --DSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE 340
+ + K F E+ ++ G+ + L LVY +MPNGSL L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 341 QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI 400
L+W+ R KI G A+ + +L + +HRD+K++NILLD F A++ DFGLARA
Sbjct: 121 TPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 177
Query: 401 ENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPH 460
E +V GT Y+APE G+ TP+SD++ FG V+LE++ G + H
Sbjct: 178 EKFAQXVMXXRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EH 231
Query: 461 QQHAYTLVDWVWMLHREGHIQDAVDQRLN-INSVVDEAKRLLLLGLACSHPIASERPKTE 519
++ L + E I+D +D+++N +S EA + + C H ++RP +
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEA--MYSVASQCLHEKKNKRPDIK 289
Query: 520 DILQII 525
+ Q++
Sbjct: 290 KVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 30/306 (9%)
Query: 231 FKYKELKKATNNFHE------SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR-- 282
F + ELK TNNF E + GEGGFG+VYKG +V+NT +AVKK +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG--------YVNNTTVAVKKLAAMV 57
Query: 283 --DSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE 340
+ + K F E+ + G+ + L LVY + PNGSL L
Sbjct: 58 DITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 341 QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI 400
L+W+ R KI G A+ + +L + +HRD+K++NILLD F A++ DFGLARA
Sbjct: 118 TPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARAS 174
Query: 401 ENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPH 460
E +V GT Y APE G+ TP+SD++ FG V+LE++ G + H
Sbjct: 175 EKFAQXVXXSRIV---GTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD--EH 228
Query: 461 QQHAYTLVDWVWMLHREGHIQDAVDQRLN-INSVVDEAKRLLLLGLACSHPIASERPKTE 519
++ L + E I+D +D++ N +S EA + C H ++RP +
Sbjct: 229 REPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAX--YSVASQCLHEKKNKRPDIK 286
Query: 520 DILQII 525
+ Q++
Sbjct: 287 KVQQLL 292
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGLAR +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLARVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGFVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 6 HFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 65
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 66 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 122
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 123 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 177
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 178 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 235
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 236 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 278
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 279 QLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 138/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLGRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
++M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 34/307 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG VYKG++ + +A+K + K + DFL E I+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKK--EVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + ++++ ++M NG+L+K+L + ++ +L G+A+ + YL N
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL--QLVGMLRGIAAGMKYLAN-- 165
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRDL A NIL++++ ++ DFGL+R +E++ A + G + + APE
Sbjct: 166 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE--ATYTTSGGKIPIRWTAPEAI 222
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQ 486
K T SDV+ FG V+ EV+ G P W L + A++
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP----------------YWELSNH-EVMKAIND 265
Query: 487 RLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQI----ISGTSTVPYVPQFKP--A 540
+ + +D + L + C + RPK DI+ I I ++ + F P +
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVS 325
Query: 541 FTWPSTS 547
PSTS
Sbjct: 326 IRLPSTS 332
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 138/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
+ M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEXMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGAVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 138/324 (42%), Gaps = 41/324 (12%)
Query: 216 HHNLGKLRLPGMPREFKYKELKKATNNFHESMR------------LGEGGFGIVYKGIIH 263
H G L+LPG+ + T HE + +G G FG V G +
Sbjct: 8 HFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK 67
Query: 264 HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLV 322
+ + +A+K + K + DFL E +I+ G + +++V
Sbjct: 68 LPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 323 YDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL 382
+ M NGSL+ +L Q T+ +L G+AS + YL D VHRDL A NIL
Sbjct: 125 TEXMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS---DMGYVHRDLAARNIL 179
Query: 383 LDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFG 442
++++ ++ DFGL+R +E++ A + G + + +PE K T SDV+ +G
Sbjct: 180 INSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 443 AVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLL 501
V+ EV+ G P W + + I+ AVD+ + +D L
Sbjct: 238 IVLWEVMSYGERP----------------YWEMSNQDVIK-AVDEGYRLPPPMDCPAALY 280
Query: 502 LLGLACSHPIASERPKTEDILQII 525
L L C + RPK E I+ I+
Sbjct: 281 QLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 26 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 78 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 132
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 188
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 29 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 81 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 135
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 136 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 191
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 192 NYGTFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 28 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 79
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 80 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 135 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 190
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 191 NYGTFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 22 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 73
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 74 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 128
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 129 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 185 NYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 20 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 21 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 73 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 128 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 183
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 184 NYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 20 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE----GAKFPIKWTAPEAI 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 30 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 81
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 82 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 136
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 137 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI 192
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 193 NYGTFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 26 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 78 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 132
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 133 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI 188
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 189 NYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 25 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 76
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 77 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 131
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 132 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI 187
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 188 NYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 27/278 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K + K + DFL E +I+
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + +++V ++M NGSL+ +L Q T+ +L G+AS + YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS--- 152
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFGL+R +E++ A + G + + +PE
Sbjct: 153 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAI 210
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQR 487
K T SDV+ +G V+ EV + + + Y W + + I+ AVD+
Sbjct: 211 AYRKFTSASDVWSYGIVLWEV---------MSYGERPY------WEMSNQDVIK-AVDEG 254
Query: 488 LNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ +D L L L C + RPK E I+ I+
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 27/278 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K + K + DFL E +I+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + +++V ++M NGSL+ +L Q T+ +L G+AS + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS--- 135
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFGL+R +E++ A + G + + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAI 193
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQR 487
K T SDV+ +G V+ EV + + + Y W + + I+ AVD+
Sbjct: 194 AYRKFTSASDVWSYGIVLWEV---------MSYGERPY------WEMSNQDVIK-AVDEG 237
Query: 488 LNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ +D L L L C + RPK E I+ I+
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 34/243 (13%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSRDS-IK 286
R K ELK+ LG G FG VYKGI + + + +A+K + + K
Sbjct: 33 RILKETELKRVKV-------LGSGAFGTVYKGIWVPEGETVKIP---VAIKILNETTGPK 82
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQV 342
+ +F+ E I+ G C + LV MP+G L +Y++ Q+
Sbjct: 83 ANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQL 141
Query: 343 TLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN 402
LNW +A + YL+ ++++VHRDL A N+L+ + + ++ DFGLAR +E
Sbjct: 142 LLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 192
Query: 403 ERNSYAEHGLVGVPGTM--GYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIP 459
+ Y G G M ++A EC H K T +SDV+ +G + E++ G P + IP
Sbjct: 193 DEKEYNADG-----GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 247
Query: 460 HQQ 462
++
Sbjct: 248 TRE 250
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 34/243 (13%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSRDS-IK 286
R K ELK+ LG G FG VYKGI + + + +A+K + + K
Sbjct: 10 RILKETELKRVK-------VLGSGAFGTVYKGIWVPEGETVKI---PVAIKILNETTGPK 59
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQV 342
+ +F+ E I+ G C + LV MP+G L +Y++ Q+
Sbjct: 60 ANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQL 118
Query: 343 TLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN 402
LNW +A + YL+ ++++VHRDL A N+L+ + + ++ DFGLAR +E
Sbjct: 119 LLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 169
Query: 403 ERNSYAEHGLVGVPGTM--GYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIP 459
+ Y G G M ++A EC H K T +SDV+ +G + E++ G P + IP
Sbjct: 170 DEKEYNADG-----GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
Query: 460 HQQ 462
++
Sbjct: 225 TRE 227
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 20 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK--GDFLAELAIIXXXXXXX 305
++G G FG V++ H +D +AVK ++ +FL E+AI+
Sbjct: 44 KIGAGSFGTVHRAEWHGSD--------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G + L +V +++ GSL + L+ + + L+ R + VA + YL N
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ +VHRDLK+ N+L+D + ++ DFGL+R + + + GT ++APE
Sbjct: 156 R-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAA--GTPEWMAPE 209
Query: 426 CFHTGKATPESDVFGFGAVVLEVVCGRSP-GNMIPHQ 461
+ +SDV+ FG ++ E+ + P GN+ P Q
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 15 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 66
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 67 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 121
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI 177
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK--GDFLAELAIIXXXXXXX 305
++G G FG V++ H +D +AVK ++ +FL E+AI+
Sbjct: 44 KIGAGSFGTVHRAEWHGSD--------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G + L +V +++ GSL + L+ + + L+ R + VA + YL N
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ +VHR+LK+ N+L+D + ++ DFGL+R + S GT ++APE
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-----GTPEWMAPE 209
Query: 426 CFHTGKATPESDVFGFGAVVLEVVCGRSP-GNMIPHQ 461
+ +SDV+ FG ++ E+ + P GN+ P Q
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ 246
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 27/278 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K + K + DFL E +I+
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + +++V + M NGSL+ +L Q T+ +L G+AS + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI--QLVGMLRGIASGMKYLS--- 135
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFGL+R +E++ A + G + + +PE
Sbjct: 136 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTSPEAI 193
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQR 487
K T SDV+ +G V+ EV + + + Y W + + I+ AVD+
Sbjct: 194 AYRKFTSASDVWSYGIVLWEV---------MSYGERPY------WEMSNQDVIK-AVDEG 237
Query: 488 LNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ +D L L L C + RPK E I+ I+
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 29/279 (10%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + V +A+K + K + DFL E +I+
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDV---AVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G +++V +FM NG+L+ +L Q T+ +L G+A+ + YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVI--QLVGMLRGIAAGMRYLA--- 162
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFGL+R IE+ + A + G + + APE
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED--DPEAVYTTTGGKIPVRWTAPEAI 220
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQ 486
K T SDV+ +G V+ EV+ G P W + + I+ A+++
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERP----------------YWDMSNQDVIK-AIEE 263
Query: 487 RLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ + +D L L L C +ERPK E I+ I+
Sbjct: 264 GYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 16 RLGAGQFGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 67
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 68 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 122
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HR+L+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTARE----GAKFPIKWTAPEAI 178
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 27/279 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K S + K + DFL+E +I+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREI---FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + ++++ +FM NGSL+ +L Q T+ +L G+A+ + YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI--QLVGMLRGIAAGMKYLA--- 152
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFGL+R +E++ + +G + + APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQ 486
K T SDV+ +G V+ EV+ G P W + + I +A++Q
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERP----------------YWDMTNQDVI-NAIEQ 255
Query: 487 RLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ +D L L L C + RPK I+ +
Sbjct: 256 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 294
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 143
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 144 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 199
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 162
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 163 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKL 218
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 161
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 162 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKL 217
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS 287
P F+ + LK+ + LGEG FG V + ++ + Q+AVK +S +
Sbjct: 15 PTHFEKRFLKRIRD-------LGEGHFGKVE--LCRYDPEGDNTGEQVAVKSLKPESGGN 65
Query: 288 K-GDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTL 344
D E+ I+ G C E G + L+ +F+P+GSL++YL ++ L
Sbjct: 66 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL 125
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+Y + + + YL + ++ VHRDL A N+L++++ ++GDFGL +AIE ++
Sbjct: 126 KQQLKYAV--QICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
P + + APEC K SDV+ FG + E++
Sbjct: 181 EXXTVKDDRDSP--VFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 143
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 144 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 199
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 142
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 143 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 198
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 138
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 139 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 194
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 140
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 141 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 196
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 135
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 136 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 191
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G G V+ G Y+ +T++AVK + S+ S FLAE ++
Sbjct: 20 RLGAGQAGEVWMG-------YYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLV 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ ++M NGSL +L T + L N + +A + +++
Sbjct: 72 RLYAVVTQE-PIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIE--- 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++ +HRDL+A+NIL+ + ++ DFGLAR IE+ + E G + + APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE----GAKFPIKWTAPEAI 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ G T +SDV+ FG ++ E+V GR P
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS 287
P F+ + LK+ + LGEG FG V + ++ + Q+AVK +S +
Sbjct: 3 PTHFEKRFLKRIRD-------LGEGHFGKV--ELCRYDPEGDNTGEQVAVKSLKPESGGN 53
Query: 288 K-GDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTL 344
D E+ I+ G C E G + L+ +F+P+GSL++YL ++ L
Sbjct: 54 HIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL 113
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+Y + + + YL + ++ VHRDL A N+L++++ ++GDFGL +AIE ++
Sbjct: 114 KQQLKYAV--QICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
P + + APEC K SDV+ FG + E++
Sbjct: 169 EXXTVKDDRDSP--VFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 141
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ Y+ H G
Sbjct: 142 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKL 197
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 29/279 (10%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K + K + DFL E +I+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKREL---PVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + +++V ++M NGSL+ +L Q T+ +L G+++ + YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVI--QLVGMLRGISAGMKYLS--- 141
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFGL+R +E++ A + G + + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTAPEAI 199
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQ 486
K T SDV+ +G V+ EVV G P W + + I+ AV++
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERP----------------YWEMTNQDVIK-AVEE 242
Query: 487 RLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ S +D L L L C + RPK ++I+ ++
Sbjct: 243 GYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 142
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ YL + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 143 KGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKL 198
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 9/202 (4%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K S + K + DFL+E +I+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREI---FVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + ++++ +FM NGSL+ +L Q T+ +L G+A+ + YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVI--QLVGMLRGIAAGMKYLA--- 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHR L A NIL++++ ++ DFGL+R +E++ + +G + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 428 HTGKATPESDVFGFGAVVLEVV 449
K T SDV+ +G V+ EV+
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVM 208
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 40/310 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIEN-ERNSYAEHGLVG 414
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + +G +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWM 473
V ++APE T +SDV+ FG ++ E+ G SP IP V+ ++
Sbjct: 223 V----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFK 270
Query: 474 LHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
L +EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 271 LLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
Query: 530 TVPYVPQFKP 539
Y+ +P
Sbjct: 322 NEEYLDLSQP 331
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LGEG FG V+ + N D +AVK ++ ++ DF E ++
Sbjct: 23 LGEGAFGKVFLAECY-NLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLY-----------GTSEQVT--LNWNHRYKILTG 355
G C + L++V+++M +G L K+L G Q L + I +
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+AS + YL + Q VHRDL N L+ A+ ++GDFG++R + + + Y G +
Sbjct: 142 IASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST-DYYRVGGHTML 197
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
P + ++ PE K T ESDV+ FG ++ E+ G+ P
Sbjct: 198 P--IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI-ENERNSYAEHGLVGVPGTM 419
YL +K VHRDL A N ++ DF ++GDFG+ R I E + GL+ V
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV---- 196
Query: 420 GYVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 40/310 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIEN-ERNSYAEHGLVG 414
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + +G +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWM 473
V ++APE T +SDV+ FG ++ E+ G SP IP V+ ++
Sbjct: 223 V----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFK 270
Query: 474 LHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
L +EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 271 LLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
Query: 530 TVPYVPQFKP 539
Y+ +P
Sbjct: 322 NEEYLDLSQP 331
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI-ENERNSYAEHGLVGVPGTM 419
YL +K VHRDL A N ++ DF ++GDFG+ R I E + GL+ V
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV---- 193
Query: 420 GYVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI-ENERNSYAEHGLVGVPGTM 419
YL +K VHRDL A N ++ DF ++GDFG+ R I E + GL+ V
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV---- 196
Query: 420 GYVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMG 420
YL +K VHRDL A N ++ DF ++GDFG+ R I E + Y + G +P +
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLP--VR 197
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 25 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 189
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 144
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLAR-AIENERNSYAEHGLVGVP 416
+ +L + +K VHRDL A N +LD F ++ DFGLAR ++ E +S H G
Sbjct: 145 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV--HNKTGAK 199
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 25 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 189
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMG 420
YL +K VHRDL A N ++ DF ++GDFG+ R I E + Y + G +P +
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLP--VR 196
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 24 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 76
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 133
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 134 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 188
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 62
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI-ENERN 405
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 123 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 406 SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
GL+ V +++PE G T SDV+ FG V+ E+
Sbjct: 180 RKGGKGLLPV----RWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 141
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ +L + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 142 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHNKTGAKL 197
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 20 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 129
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 148
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ +L + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 149 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHNKTGAKL 204
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 205 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 25 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 189
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 77
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 138 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 193
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 194 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 22 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 131
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 132 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 186
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 143
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ +L + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 144 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHNKTGAKL 199
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 46/303 (15%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN-ERNSYAEHG 411
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + +G
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 412 LVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDW 470
+ V ++APE T +SDV+ FG ++ E+ G SP +P V+
Sbjct: 213 RLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEE 260
Query: 471 VWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIIS 526
++ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 261 LFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
Query: 527 GTS 529
TS
Sbjct: 312 LTS 314
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 64
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 125 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 180
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 181 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 20 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 129
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 143
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ +L + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 144 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHNKTGAKL 199
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 22 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 131
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 132 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 186
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 71
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 132 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 187
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 188 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 70
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 131 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 186
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 187 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 70
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 131 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 186
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 187 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 71
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI-ENERN 405
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 132 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 406 SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
GL+ V +++PE G T SDV+ FG V+ E+
Sbjct: 189 RKGGKGLLPV----RWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMG 420
YL +K VHRDL A N ++ DF ++GDFG+ R I E Y + G +P +
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYYRKGGKGLLP--VR 197
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 68
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 129 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 184
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 185 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 144
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ +L + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 145 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHNKTGAKL 200
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 201 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 33 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 85
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 142
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 143 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 197
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 198 AYNKFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 116/248 (46%), Gaps = 26/248 (10%)
Query: 239 ATNNFHESMRLGEGGFGIVYKG-IIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAI 297
A N ++G+GGFG+V+KG ++ + + + + + I+ +F E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ G H + +V +F+P G L L + + W+ + +++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIA 132
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILL-----DADFNARLGDFGLARAIENERNSYAEHGL 412
+ Y+QN+ + +VHRDL++ NI L +A A++ DFGL++ + H +
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ--------SVHSV 183
Query: 413 VGVPGTMGYVAPECFHTGKA--TPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
G+ G ++APE + T ++D + F ++ ++ G P +++Y + +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG-----PFDEYSYGKIKF 238
Query: 471 VWMLHREG 478
+ M+ EG
Sbjct: 239 INMIREEG 246
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LGEG FG V+ H N D +AVK S ++ DF E ++
Sbjct: 26 LGEGAFGKVFLAECH-NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKY---------LYGTSEQVT---LNWNHRYKILTGV 356
G C E LL+V+++M +G L ++ L E V L + + V
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP 416
A+ + YL + VHRDL N L+ ++GDFG++R I + + Y G +P
Sbjct: 145 AAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-DYYRVGGRTMLP 200
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ ++ PE K T ESDV+ FG V+ E+ G+ P
Sbjct: 201 --IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IKSKGDFLAELAIIXXXX 302
H + +G G FG VY G + ND + AVK +R + I FL E I+
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKI---HCAVKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 303 XXXXXXXXGWC-HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTG----VA 357
G C +G L+V +M +G L ++ + T+ K L G VA
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV------KDLIGFGLQVA 202
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ +L + +K VHRDL A N +LD F ++ DFGLAR + ++ + H G
Sbjct: 203 KGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-SVHNKTGAKL 258
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ ++A E T K T +SDV+ FG ++ E++ +P
Sbjct: 259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LGEG FG V+ H N D +AVK S ++ DF E ++
Sbjct: 20 LGEGAFGKVFLAECH-NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKY---------LYGTSEQVT---LNWNHRYKILTGV 356
G C E LL+V+++M +G L ++ L E V L + + V
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP 416
A+ + YL + VHRDL N L+ ++GDFG++R I + + Y G +P
Sbjct: 139 AAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-DYYRVGGRTMLP 194
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ ++ PE K T ESDV+ FG V+ E+ G+ P
Sbjct: 195 --IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 77
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL + N
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 138 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 193
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 194 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + R+ DFGLAR I N + Y + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYKKTTNGRL 221
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 222 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 271
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 272 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 135/307 (43%), Gaps = 44/307 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYL-----------YGTSE--QVTLNWNHRYKI 352
G C + G L ++ ++ G+L +YL Y S + L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 211
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 212 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 261
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 262 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
Query: 528 TSTVPYV 534
TS Y+
Sbjct: 313 TSNQEYL 319
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 25 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 189
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 99
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 160 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 215
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 216 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 20/219 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LGEG FG V+ H N D +AVK S ++ DF E ++
Sbjct: 49 LGEGAFGKVFLAECH-NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKY---------LYGTSEQVT---LNWNHRYKILTGV 356
G C E LL+V+++M +G L ++ L E V L + + V
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP 416
A+ + YL + VHRDL N L+ ++GDFG++R I + + Y G +P
Sbjct: 168 AAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-DYYRVGGRTMLP 223
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ ++ PE K T ESDV+ FG V+ E+ G+ P
Sbjct: 224 --IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 20 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 129
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 20 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 129
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 20 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 129
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMG 420
YL +K VHR+L A N ++ DF ++GDFG+ R I E + Y + G +P +
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLP--VR 197
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 20 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 129
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 130 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 184
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 185 AYNKFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKS 287
REF KE+ + E +G G FG V +G + + + +A+K + +
Sbjct: 7 REFA-KEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGK---KESCVAIKTLKGGYTERQ 60
Query: 288 KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWN 347
+ +FL+E +I+ G ++++ +FM NG+L+ +L Q T+
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI-- 118
Query: 348 HRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY 407
+L G+AS + YL + VHRDL A NIL++++ ++ DFGL+R +E +
Sbjct: 119 QLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
E +G + + APE K T SD + +G V+ EV+
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 67
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL + N
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N ++ DF ++GDFG+ R I E +
Sbjct: 128 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 183
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 184 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG+VY+G + + T++AVK + S++ + +FL E +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAE-TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------WNHRYKILTGVASAV 360
G + L+V + M +G L+ YL + N ++ +A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMG 420
YL +K VHR+L A N ++ DF ++GDFG+ R I E + Y + G +P +
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLP--VR 198
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEV 448
++APE G T SD++ FG V+ E+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 145 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 200
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 201 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 250
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 251 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 301
Query: 528 TS 529
TS
Sbjct: 302 TS 303
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 244 HESMRLGE----GGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAI 297
HE + LGE G FG V+ G + DNT +AVK R+++ K FL E I
Sbjct: 113 HEDLVLGEQIGRGNFGEVFSG------RLRADNTLVAVKS-CRETLPPDLKAKFLQEARI 165
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ G C +K + +V + + G +L +E L +++ A
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAA 223
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ + YL+++ +HRDL A N L+ ++ DFG++R E + A GL VP
Sbjct: 224 AGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVXAASGGLRQVP- 278
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQ 462
+ + APE + G+ + ESDV+ FG ++ E G SP + +QQ
Sbjct: 279 -VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 15/222 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLA 293
E + A S LG+G FG+VY+G+ + + T++A+K + S++ + +FL
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLN 64
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN-------W 346
E +++ G + L++ + M G L+ YL ++ N
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ ++ +A + YL K VHRDL A N + DF ++GDFG+ R I E +
Sbjct: 125 SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDY 180
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y + G +P + +++PE G T SDV+ FG V+ E+
Sbjct: 181 YRKGGKGLLP--VRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKS 287
REF KE+ + + + +GE FG V G + + + +A+K + K
Sbjct: 20 REFA-KEIDASCIKIEKVIGVGE--FGEVCSGRLKVPGKREI---CVAIKTLKAGYTDKQ 73
Query: 288 KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWN 347
+ DFL+E +I+ G + ++++ ++M NGSL+ +L + T+
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 131
Query: 348 HRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY 407
+L G+ S + YL D VHRDL A NIL++++ ++ DFG++R +E+ +
Sbjct: 132 QLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED--DPE 186
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTL 467
A + G + + APE K T SDV+ +G V+ EV + + + Y
Sbjct: 187 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV---------MSYGERPY-- 235
Query: 468 VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
W + + I+ A+++ + +D L L L C S+RPK I+ ++
Sbjct: 236 ----WDMSNQDVIK-AIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 211
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 212 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 261
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 262 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
Query: 528 TS 529
TS
Sbjct: 313 TS 314
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V+ G Y ++ ++A+K R+ S+ DF+ E ++
Sbjct: 15 IGSGQFGLVHLG-------YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C E+ + LV++FM +G L YL +++ + V + YL+ +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---E 121
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
V+HRDL A N L+ + ++ DFG+ R + +++ + + G + + +PE F
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKWASPEVFS 177
Query: 429 TGKATPESDVFGFGAVVLEV 448
+ + +SDV+ FG ++ EV
Sbjct: 178 FSRYSSKSDVWSFGVLMWEV 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 149 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 204
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 205 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 254
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 255 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 305
Query: 528 TS 529
TS
Sbjct: 306 TS 307
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 156 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 211
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 212 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 261
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 262 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
Query: 528 TS 529
TS
Sbjct: 313 TS 314
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 221
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 222 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 271
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 272 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYL-----------YGTSE--QVTLNWNHRYKI 352
G C + G L ++ ++ G+L +YL Y S + L+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 141 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 196
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 197 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 246
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 247 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297
Query: 528 TS 529
TS
Sbjct: 298 TS 299
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 197 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 252
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 253 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 302
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 303 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
Query: 528 TS 529
TS
Sbjct: 354 TS 355
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 267
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 268 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 317
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 318 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V I + T++AVK D+ K D ++E+ ++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE---QVTLNWNHR----------YKI 352
G C + G L ++ ++ G+L +YL + + N +H
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + YL + +K +HRDL A N+L+ D ++ DFGLAR I + + Y +
Sbjct: 148 AYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI-HHIDYYKKTTN 203
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWV 471
+P + ++APE T +SDV+ FG ++ E+ G SP +P V+ +
Sbjct: 204 GRLP--VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--------VEEL 253
Query: 472 WMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISG 527
+ L +EGH D N L ++ C H + S+RP ED+ +I++
Sbjct: 254 FKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 304
Query: 528 TS 529
TS
Sbjct: 305 TS 306
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 22/226 (9%)
Query: 244 HESMRLGE----GGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAI 297
HE + LGE G FG V+ G + DNT +AVK R+++ K FL E I
Sbjct: 113 HEDLVLGEQIGRGNFGEVFSG------RLRADNTLVAVKS-CRETLPPDLKAKFLQEARI 165
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ G C +K + +V + + G +L +E L +++ A
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAA 223
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
+ + YL+++ +HRDL A N L+ ++ DFG++R E + A GL VP
Sbjct: 224 AGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVP- 278
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQ 462
+ + APE + G+ + ESDV+ FG ++ E G SP + +QQ
Sbjct: 279 -VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V+ G Y ++ ++A+K R+ S+ DF+ E ++
Sbjct: 18 IGSGQFGLVHLG-------YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C E+ + LV++FM +G L YL +++ + V + YL+ +
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---E 124
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
V+HRDL A N L+ + ++ DFG+ R + +++ + + G + + +PE F
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKWASPEVFS 180
Query: 429 TGKATPESDVFGFGAVVLEV 448
+ + +SDV+ FG ++ EV
Sbjct: 181 FSRYSSKSDVWSFGVLMWEV 200
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 33/321 (10%)
Query: 213 AEPHHNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDN 272
AEPH PG +E++ + H +G G G V G + Q V
Sbjct: 27 AEPH----TYEEPGRAGRSFTREIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDV-- 78
Query: 273 TQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL 331
+A+K + + + DFL+E +I+ G ++V ++M NGSL
Sbjct: 79 -PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 332 EKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARL 391
+ +L Q T+ +L GV + + YL D VHRDL A N+L+D++ ++
Sbjct: 138 DTFLRTHDGQFTIM--QLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKV 192
Query: 392 GDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
DFGL+R +E++ + A + G + + APE + SDV+ FG V+ EV+
Sbjct: 193 SDFGLSRVLEDDPD--AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL-- 248
Query: 452 RSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPI 511
AY + M +R+ + +V++ + + + L L L C H
Sbjct: 249 ------------AYGERPYWNMTNRD--VISSVEEGYRLPAPMGCPHALHQLMLDCWHKD 294
Query: 512 ASERPKTEDILQIISGTSTVP 532
++RP+ I+ ++ P
Sbjct: 295 RAQRPRFSQIVSVLDALIRSP 315
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V+ G Y ++ ++A+K R+ S+ DF+ E ++
Sbjct: 13 IGSGQFGLVHLG-------YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C E+ + LV++FM +G L YL +++ + V + YL+ +
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---E 119
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
V+HRDL A N L+ + ++ DFG+ R + +++ + + G + + +PE F
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKWASPEVFS 175
Query: 429 TGKATPESDVFGFGAVVLEV 448
+ + +SDV+ FG ++ EV
Sbjct: 176 FSRYSSKSDVWSFGVLMWEV 195
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 221
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 222 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 271
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 272 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 224 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 276
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 333
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HR+L A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 334 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 388
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 389 AYNKFSIKSDVWAFGVLLWEIATYGMSP 416
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G FG V+ + + T++AVK S+ + FLAE ++
Sbjct: 22 KLGAGQFGEVWMATYNKH-------TKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLV 73
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLY---GTSEQVTLNWNHRYKILTGVASAVYYLQ 364
K + ++ +FM GSL +L G+ + + + +I G+A + Q
Sbjct: 74 KLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA---FIEQ 129
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
Y +HRDL+A+NIL+ A ++ DFGLAR IE+ + E G + + AP
Sbjct: 130 RNY----IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE----GAKFPIKWTAP 181
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
E + G T +SDV+ FG +++E+V GR P
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V+ G Y ++ ++A+K R+ S+ DF+ E ++
Sbjct: 15 IGSGQFGLVHLG-------YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C E+ + LV++FM +G L YL +++ + V + YL+ +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---E 121
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
V+HRDL A N L+ + ++ DFG+ R + +++ + + G + + +PE F
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKWASPEVFS 177
Query: 429 TGKATPESDVFGFGAVVLEV 448
+ + +SDV+ FG ++ EV
Sbjct: 178 FSRYSSKSDVWSFGVLMWEV 197
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 17/230 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 266 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 318
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 375
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HR+L A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 376 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 430
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHR 476
K + +SDV+ FG ++ E+ G SP I Q Y L++ + + R
Sbjct: 431 AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLEKDYRMER 479
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 40/300 (13%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIEN-ERNSYAEHGLVG 414
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + +G +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWM 473
V ++APE T +SDV+ FG ++ E+ G SP IP V+ ++
Sbjct: 223 V----KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFK 270
Query: 474 LHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
L +EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 271 LLKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 18 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + +++ H P + + APE
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTFTAHAGAKFP--IKWTAPESL 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 115/248 (46%), Gaps = 26/248 (10%)
Query: 239 ATNNFHESMRLGEGGFGIVYKG-IIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAI 297
A N ++G+GGFG+V+KG ++ + + + + + I+ +F E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ G H + +V +F+P G L L + + W+ + +++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIA 132
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILL-----DADFNARLGDFGLARAIENERNSYAEHGL 412
+ Y+QN+ + +VHRDL++ NI L +A A++ DFG ++ + H +
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ--------SVHSV 183
Query: 413 VGVPGTMGYVAPECFHTGKA--TPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
G+ G ++APE + T ++D + F ++ ++ G P +++Y + +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG-----PFDEYSYGKIKF 238
Query: 471 VWMLHREG 478
+ M+ EG
Sbjct: 239 INMIREEG 246
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 116/248 (46%), Gaps = 26/248 (10%)
Query: 239 ATNNFHESMRLGEGGFGIVYKG-IIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAI 297
A N ++G+GGFG+V+KG ++ + + + + + I+ +F E+ I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ G H + +V +F+P G L L + + W+ + +++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIA 132
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILL-----DADFNARLGDFGLARAIENERNSYAEHGL 412
+ Y+QN+ + +VHRDL++ NI L +A A++ DF L++ + H +
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ--------SVHSV 183
Query: 413 VGVPGTMGYVAPECFHTGKA--TPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
G+ G ++APE + T ++D + F ++ ++ G P + +++Y + +
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD-----EYSYGKIKF 238
Query: 471 VWMLHREG 478
+ M+ EG
Sbjct: 239 INMIREEG 246
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 20/170 (11%)
Query: 3 RDPRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDG--NKANHFVAIEFDTVK 60
+ P PA + GLAF +AP D+ P + G LG+ F DG NK+N VA+EFDT
Sbjct: 78 QAPNPA--TTADGLAFFLAPVDTQPLD--LGGMLGI---FKDGYFNKSNQIVAVEFDTFS 130
Query: 61 QG-FDPDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDRE 119
G +DP HLG+N+NS+ S K VP +N T +G V++ Y+ +K + +
Sbjct: 131 NGDWDPKGRHLGINVNSIESIKTVP----WNWT--NGEVANVFISYEASTKSLTASLVY- 183
Query: 120 GETMPQKPLLKETINLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTLD 167
++ ++ +++K L FGFSA+TG ++Q N V SW+ +
Sbjct: 184 -PSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFE 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G FG VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 18 KLGGGQFGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++ H P + + APE
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTXTAHAGAKFP--IKWTAPESL 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 208
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 209 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 258
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 259 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 308
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V+ G Y ++ ++A+K S+ S+ DF+ E ++
Sbjct: 35 IGSGQFGLVHLG-------YWLNKDKVAIKTIKEGSM-SEDDFIEEAEVMMKLSHPKLVQ 86
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C E+ + LV++FM +G L YL +++ + V + YL+ +
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---E 141
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
V+HRDL A N L+ + ++ DFG+ R + +++ + + G + + +PE F
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKWASPEVFS 197
Query: 429 TGKATPESDVFGFGAVVLEV 448
+ + +SDV+ FG ++ EV
Sbjct: 198 FSRYSSKSDVWSFGVLMWEV 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 138/321 (42%), Gaps = 33/321 (10%)
Query: 213 AEPHHNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDN 272
AEPH PG +E++ + H +G G G V G + Q V
Sbjct: 27 AEPH----TYEEPGRAGRSFTREIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDV-- 78
Query: 273 TQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL 331
+A+K + + + DFL+E +I+ G ++V ++M NGSL
Sbjct: 79 -PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 332 EKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARL 391
+ +L Q T+ +L GV + + YL D VHRDL A N+L+D++ ++
Sbjct: 138 DTFLRTHDGQFTIM--QLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKV 192
Query: 392 GDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
DFGL+R +E++ ++ +P + + APE + SDV+ FG V+ EV+
Sbjct: 193 SDFGLSRVLEDDPDAAXTTTGGKIP--IRWTAPEAIAFRTFSSASDVWSFGVVMWEVL-- 248
Query: 452 RSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPI 511
AY + M +R+ + +V++ + + + L L L C H
Sbjct: 249 ------------AYGERPYWNMTNRD--VISSVEEGYRLPAPMGCPHALHQLMLDCWHKD 294
Query: 512 ASERPKTEDILQIISGTSTVP 532
++RP+ I+ ++ P
Sbjct: 295 RAQRPRFSQIVSVLDALIRSP 315
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKS 287
REF KE+ + + + +GE FG V G + + + +A+K + K
Sbjct: 5 REFA-KEIDASCIKIEKVIGVGE--FGEVCSGRLKVPGKREI---CVAIKTLKAGYTDKQ 58
Query: 288 KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWN 347
+ DFL+E +I+ G + ++++ ++M NGSL+ +L + T+
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 116
Query: 348 HRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY 407
+L G+ S + YL D VHRDL A NIL++++ ++ DFG++R +E++
Sbjct: 117 QLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE-- 171
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTL 467
A + G + + APE K T SDV+ +G V+ EV + + + Y
Sbjct: 172 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV---------MSYGERPY-- 220
Query: 468 VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
W + + I+ A+++ + +D L L L C S+RPK I+ ++
Sbjct: 221 ----WDMSNQDVIK-AIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 25 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++ H P + + APE
Sbjct: 135 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTXTAHAGAKFP--IKWTAPESL 189
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 190 AYNKFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 227 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 279
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 336
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HR+L A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 337 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 391
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 392 AYNKFSIKSDVWAFGVLLWEIATYGMSP 419
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 210
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 211 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 260
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 261 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 310
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 213
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 214 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 263
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 264 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 313
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 21 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 73
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 130
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++ H P + + APE
Sbjct: 131 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTXTAHAGAKFP--IKWTAPESL 185
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK-GDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ + D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ ++ G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 221
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 222 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 271
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 272 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 20 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +F+P GSL +YL E++ K+L + ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERID-----HIKLLQYTSQICKGMEY 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 188
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G FG V+ + + T++AVK S+ + FLAE ++
Sbjct: 195 KLGAGQFGEVWMATYNKH-------TKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLV 246
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLY---GTSEQVTLNWNHRYKILTGVASAVYYLQ 364
K + ++ +FM GSL +L G+ + + + +I G+A + Q
Sbjct: 247 KLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA---FIEQ 302
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
Y +HRDL+A+NIL+ A ++ DFGLAR IE+ N Y P + + AP
Sbjct: 303 RNY----IHRDLRAANILVSASLVCKIADFGLARVIED--NEYTAREGAKFP--IKWTAP 354
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
E + G T +SDV+ FG +++E+V GR P
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 27/278 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V G + + + +A+K + K + DFL+E +I+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREI---CVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + ++++ ++M NGSL+ +L + T+ +L G+ S + YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI--QLVGMLRGIGSGMKYLS--- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D VHRDL A NIL++++ ++ DFG++R +E++ A + G + + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--AAYTTRGGKIPIRWTAPEAI 185
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQR 487
K T SDV+ +G V+ EV + + + Y W + + I+ A+++
Sbjct: 186 AYRKFTSASDVWSYGIVMWEV---------MSYGERPY------WDMSNQDVIK-AIEEG 229
Query: 488 LNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ +D L L L C S+RPK I+ ++
Sbjct: 230 YRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXXXX-XX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ + G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 221
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 222 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 271
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 272 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 38/299 (12%)
Query: 249 LGEGGFG-IVYKGIIHHNDQYHVDNTQIAVKKFSRDSI-KSKGDFLAELAIIXXX-XXXX 305
LGEG FG +V + + + +AVK D+ K D ++E+ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY-----GTSEQVTLNWNHRYKI-LTGVASA 359
G C + G L ++ + G+L +YL G +N ++ + S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 VYYLQN--EY--DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
Y L EY QK +HRDL A N+L+ + ++ DFGLAR I N + Y + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTNGRL 221
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEV-VCGRSPGNMIPHQQHAYTLVDWVWML 474
P + ++APE T +SDV+ FG ++ E+ G SP IP V+ ++ L
Sbjct: 222 P--VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------VEELFKL 271
Query: 475 HREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK----TEDILQIISGTS 529
+EGH D N L ++ C H + S+RP ED+ +I++ T+
Sbjct: 272 LKEGHRMDKPANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 21 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 73
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 130
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + + + G + + APE
Sbjct: 131 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT----APAGAKFPIKWTAPESL 185
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 186 AYNKFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LGEG FG V+ + N D +AVK S ++ DF E ++
Sbjct: 21 LGEGAFGKVFLAECY-NLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVT----------LNWNHRYKILTGVAS 358
G C E L++V+++M +G L K+L L + I +A+
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT 418
+ YL + Q VHRDL N L+ + ++GDFG++R + + + Y G +P
Sbjct: 140 GMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST-DYYRVGGHTMLP-- 193
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ ++ PE K T ESDV+ G V+ E+ G+ P
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 22 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 74
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q +N + T ++SA+ YL+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-- 131
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + + + G + + APE
Sbjct: 132 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT----APAGAKFPIKWTAPESL 186
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 187 AYNKFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
+G G FG V +G + + + +A+K + + + +FL+E +I+
Sbjct: 22 IGAGEFGEVCRGRLKAPGK---KESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G ++++ +FM NG+L+ +L Q T+ +L G+AS + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLA--- 133
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ VHRDL A NIL++++ ++ DFGL+R +E + +G + + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 428 HTGKATPESDVFGFGAVVLEVV 449
K T SD + +G V+ EV+
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVM 215
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY+G+ + + +AVK D+++ + +FL E A++
Sbjct: 18 KLGGGQYGEVYEGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + ++ +FM G+L YL + Q Y + T ++SA+ YL+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEK-- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++ H P + + APE
Sbjct: 128 -KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG--DTXTAHAGAKFP--IKWTAPESL 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
K + +SDV+ FG ++ E+ G SP
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G VY G+ + + +AVK D+++ + +FL E A++
Sbjct: 39 KLGGGQYGEVYVGV------WKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 91
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G C + +V ++MP G+L YL + + Y + T ++SA+ YL+
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY-MATQISSAMEYLEK-- 148
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL A N L+ + ++ DFGL+R + ++Y H P + + APE
Sbjct: 149 -KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG--DTYTAHAGAKFP--IKWTAPESL 203
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ +SDV+ FG ++ E+ G SP
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 20 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL +E++ K+L + ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERID-----HIKLLQYTSQICKGMEY 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 188
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V+ G Y ++ ++A+K R+ S+ DF+ E ++
Sbjct: 16 IGSGQFGLVHLG-------YWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C E+ + LV +FM +G L YL +++ + V + YL+ +
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---E 122
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
V+HRDL A N L+ + ++ DFG+ R + +++ + + G + + +PE F
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS----TGTKFPVKWASPEVFS 178
Query: 429 TGKATPESDVFGFGAVVLEV 448
+ + +SDV+ FG ++ EV
Sbjct: 179 FSRYSSKSDVWSFGVLMWEV 198
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 36/295 (12%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 190 VKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKL 241
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER- 298
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 299 --MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPEA 352
Query: 427 FHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVD 485
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V+
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQVE 395
Query: 486 QRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
+ + + + L L C ERP T + LQ PQ++P
Sbjct: 396 RGYRMPCPPECPESLHDLMCQCWRKEPEERP-TFEYLQAFLEDYFTSTEPQYQPG 449
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 228 PREFKYKEL-KKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQI--AVKKFSRDS 284
P E K K+L K N + LG G FG V +G+ Y + QI A+K + +
Sbjct: 322 PEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGV------YRMRKKQIDVAIKVLKQGT 375
Query: 285 IKSKGD-FLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVT 343
K+ + + E I+ G C + L+LV + G L K+L G E++
Sbjct: 376 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIP 434
Query: 344 LNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENE 403
++ + ++L V+ + YL+ ++ VHR+L A N+LL A++ DFGL++A+ +
Sbjct: 435 VS--NVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489
Query: 404 RNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
+ Y P + + APEC + K + SDV+ +G + E +
Sbjct: 490 DSYYTARSAGKWP--LKWYAPECINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 21/228 (9%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG P F + LKK + LGEG FG V + ++ +AVK D+
Sbjct: 22 PGDPTVFHKRYLKKIRD-------LGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKADA 72
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKG--KLLLVYDFMPNGSLEKYLYGTSEQ 341
+ + + E+ I+ G C + G L LV +++P GSL YL S
Sbjct: 73 GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG 132
Query: 342 VTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIE 401
+ +I G+A YL + Q +HRDL A N+LLD D ++GDFGLA+A+
Sbjct: 133 LAQLLLFAQQICEGMA----YL---HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 402 NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
Y P + + APEC K SDV+ FG + E++
Sbjct: 186 EGHEXYRVREDGDSP--VFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG--FDPDDNHLGL 72
G+ F IAP D+ P S G G T +D A HFV +EFDT DP +H+G+
Sbjct: 84 GIIFFIAPEDTQIPAGSIG---GGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGI 140
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKET 132
++NSV S K VP G V V YD +K + V + + + + +
Sbjct: 141 DVNSVDSVKTVPWNS------VSGAVVKVTVIYDSSTKTLSVAVTNDNGDITT---IAQV 191
Query: 133 INLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQTKKEK 177
++LK L FGFSAS Q++ +RSW+ +I T +
Sbjct: 192 VDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITTTRRS 236
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 16 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 73
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 128
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 184
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 17 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 129
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 185
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G Y+ ++T++AVK ++ + FL E ++
Sbjct: 20 RLGAGQFGEVWMG-------YYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLV 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ + ++ ++M GSL +L + E + +A + Y++
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER-- 128
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL+A+N+L+ ++ DFGLAR IE+ + E G + + APE
Sbjct: 129 -KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE----GAKFPIKWTAPEAI 183
Query: 428 HTGKATPESDVFGFGAVVLEVVC-------GRSPGNMIPHQQHAYTL 467
+ G T +SDV+ FG ++ E+V GR+ +++ Y +
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 15 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 72
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 127
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 183
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYEL 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 190 VKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKL 241
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER- 298
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 299 --MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPEA 352
Query: 427 FHTGKATPESDVFGFGAVVLEVVC-GRSP 454
G+ T +SDV+ FG ++ E+ GR P
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 21 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 78
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 133
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 189
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYEL 214
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G FG V G N ++AVK D+ FLAE +++
Sbjct: 201 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATAQA--FLAEASVMTQLRHSNLVQ 250
Query: 309 XXG-WCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G EKG L +V ++M GSL YL V L + K V A+ YL+
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-- 307
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRDL A N+L+ D A++ DFGL + E +S + G + V T APE
Sbjct: 308 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT----APEAL 358
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIP 459
K + +SDV+ FG ++ E+ GR P IP
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 129/295 (43%), Gaps = 36/295 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 16 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 67
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 68 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 125
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 126 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 178
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 221
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKP 539
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 222 ERGYRMPCPPECPESLHDLMCQCWRKEPEERP-TFEYLQAFLEDYFTSTEPQYQP 275
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 17 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 129
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 185
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 17 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 129
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ + V PG + + A
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK----VKEPGESPIFWYA 185
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 28/223 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIK-SKGDFLAELAI 297
+++ F + +LG G + VYKG+ Y +A+K+ DS + + + E+++
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVY------VALKEVKLDSEEGTPSTAIREISL 56
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG-----TSEQVTLNW--NHRY 350
+ H + KL LV++FM N L+KY+ T + LN ++
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEH 410
++L G+A ++ K++HRDLK N+L++ +LGDFGLARA N+++
Sbjct: 116 QLLQGLAFC-------HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 411 GLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGR 452
+ T+ Y AP+ + S D++ G ++ E++ G+
Sbjct: 169 VV-----TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 20 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 188
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 35 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 147
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 203
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 18 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 75
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 130
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HR+L NIL++ + ++GDFGL + + ++ Y V PG + + A
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK----VKEPGESPIFWYA 186
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYEL 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 22 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 79
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 134
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 190
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V AVK S+ S+ +F E +
Sbjct: 16 LGSGQFGVVKLG--KWKGQYDV-----AVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVK 67
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + +V +++ NG L YL S L + ++ V + +L++
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES--- 122
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
+ +HRDL A N L+D D ++ DFG+ R + +++ + VG + + APE FH
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTKFPVKWSAPEVFH 178
Query: 429 TGKATPESDVFGFGAVVLEVV-CGRSPGNM 457
K + +SDV+ FG ++ EV G+ P ++
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 24 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 81
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 136
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 192
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYEL 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 48 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 105
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 160
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 216
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYEL 241
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 273 VKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKL 324
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 325 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER- 381
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 382 --MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPEA 435
Query: 427 FHTGKATPESDVFGFGAVVLEVVC-GRSP 454
G+ T +SDV+ FG ++ E+ GR P
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 23 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 80
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 135
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 191
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G FG V G N ++AVK D+ FLAE +++
Sbjct: 14 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATAQA--FLAEASVMTQLRHSNLVQ 63
Query: 309 XXG-WCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G EKG L +V ++M GSL YL V L + K V A+ YL+
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-- 120
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRDL A N+L+ D A++ DFGL + E +S + G + V T APE
Sbjct: 121 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT----APEAL 171
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIP 459
K + +SDV+ FG ++ E+ GR P IP
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G FG V G N ++AVK D+ FLAE +++
Sbjct: 29 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATAQA--FLAEASVMTQLRHSNLVQ 78
Query: 309 XXG-WCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G EKG L +V ++M GSL YL V L + K V A+ YL+
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-- 135
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRDL A N+L+ D A++ DFGL + E +S + G + V T APE
Sbjct: 136 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWT----APEAL 186
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIP 459
K + +SDV+ FG ++ E+ GR P IP
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVKK + + DF E+ I+
Sbjct: 35 QLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 92
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G C+ G+ L L+ +++P GSL YL E++ K+L + ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQICKGMEY 147
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ +HRDL NIL++ + ++GDFGL + + ++ E V PG + + A
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----EXXKVKEPGESPIFWYA 203
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE K + SDV+ FG V+ E+
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYEL 228
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 20 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 71
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER 129
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 130 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 182
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 225
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQCWRKEPEERP-TFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQI--AVKKFSRDSIKSKGD-FLAE 294
K N + LG G FG V +G+ Y + QI A+K + + K+ + + E
Sbjct: 7 KRDNLLIADIELGCGNFGSVRQGV------YRMRKKQIDVAIKVLKQGTEKADTEEMMRE 60
Query: 295 LAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILT 354
I+ G C + L+LV + G L K+L G E++ ++ + ++L
Sbjct: 61 AQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLH 117
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
V+ + YL+ ++ VHRDL A N+LL A++ DFGL++A+ + + Y
Sbjct: 118 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
P + + APEC + K + SDV+ +G + E + G+ P
Sbjct: 175 WP--LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 30/252 (11%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIX 299
NN +GEG FG V++ Y T +AVK + S + DF E A++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYE-PFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 300 XXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNH----------- 348
G C + L++++M G L ++L S + +H
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 349 ----------RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLAR 398
+ I VA+ + YL ++K VHRDL N L+ + ++ DFGL+R
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNM 457
I + + Y G +P + ++ PE + T ESDV+ +G V+ E+ G P
Sbjct: 223 NIYSA-DYYKADGNDAIP--IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 458 IPHQQHAYTLVD 469
+ H++ Y + D
Sbjct: 280 MAHEEVIYYVRD 291
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG--FDPDDNHLGL 72
G+ F IAP D+ P S G G T +D A HFV +EFDT DP +H+G+
Sbjct: 84 GIIFFIAPEDTQIPAGSIG---GGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGI 140
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKET 132
++NSV S K VP G V V YD +K + V + + + + +
Sbjct: 141 DVNSVDSVKTVPWNS------VSGAVVKVTVIYDSSTKTLSVAVTNDNGDITT---IAQV 191
Query: 133 INLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQT 173
++LK L FGFSAS Q++ +RSW+ +I T
Sbjct: 192 VDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTSTLITT 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 190 VKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKL 241
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 242 VQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER- 298
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 299 --MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPEA 352
Query: 427 FHTGKATPESDVFGFGAVVLEVVC-GRSP 454
G+ T +SDV+ FG ++ E+ GR P
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 13 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 64
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 65 LVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER 122
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ + + G + + APE
Sbjct: 123 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ----GAKFPIKWTAPE 175
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
G+ T +SDV+ FG ++ E+ GR P
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 14 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 65
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 66 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 123
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 124 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 176
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 219
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 220 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 12 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 63
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 64 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 121
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 122 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 174
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 217
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 218 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 272
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 31 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + + I A + YL
Sbjct: 82 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYL-- 136
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGL A E R S H + G++ ++APE
Sbjct: 137 -HAKSIIHRDLKSNNIFLHEDNTVKIGDFGL--ATEKSRWS-GSHQFEQLSGSILWMAPE 192
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQD 482
+ P +SDV+ FG V+ E++ G+ P + I ++ + M+ R D
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI------IEMVGRGSLSPD 246
Query: 483 AVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
R N KR+ L C ERP IL I
Sbjct: 247 LSKVRSNC------PKRMKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
RLG G FG V+ G + NT++A+K ++ S FL E I+
Sbjct: 16 RLGNGQFGEVWMGTWN-------GNTKVAIKTLKPGTM-SPESFLEEAQIMKKLKHDKLV 67
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
E+ + +V ++M GSL +L E L + + VA+ + Y++
Sbjct: 68 QLYAVVSEE-PIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIER-- 123
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+HRDL+++NIL+ ++ DFGLAR IE+ + + G + + APE
Sbjct: 124 -MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ----GAKFPIKWTAPEAA 178
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
G+ T +SDV+ FG ++ E+V GR P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 23/227 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G FG V+ G Y+ ++T++AVK ++ + FL E ++
Sbjct: 19 KLGAGQFGEVWMG-------YYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLV 70
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
++ + ++ +FM GSL +L + E + +A + Y++
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER-- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ +HRDL+A+N+L+ ++ DFGLAR IE+ + E G + + APE
Sbjct: 128 -KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE----GAKFPIKWTAPEAI 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-------GRSPGNMIPHQQHAYTL 467
+ G T +S+V+ FG ++ E+V GR+ +++ Y +
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM 229
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ + + G + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ----GAKFPIKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G FG V G N ++AVK D+ FLAE +++
Sbjct: 20 IGKGEFGDVMLGDYRGN--------KVAVKCIKNDATAQA--FLAEASVMTQLRHSNLVQ 69
Query: 309 XXG-WCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G EKG L +V ++M GSL YL V L + K V A+ YL+
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEG-- 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRDL A N+L+ D A++ DFGL + E +S + G + V + APE
Sbjct: 127 -NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVK----WTAPEAL 177
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSPGNMIP 459
+ +SDV+ FG ++ E+ GR P IP
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVPYPRIP 210
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
++GEG FG K I+ + + D Q +K+ SR S K + + E+A++
Sbjct: 31 KIGEGSFG---KAILVKSTE---DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E G L +V D+ G L K + + V + +IL L++
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQED---QILDWFVQICLALKH 140
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+D+K++HRD+K+ NI L D +LGDFG+AR + NS E + GT Y++PE
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL----NSTVELARACI-GTPYYLSPE 195
Query: 426 CFHTGKATPESDVFGFGAVVLEVV 449
+SD++ G V+ E+
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELC 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 75
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 76 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 186 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 120/283 (42%), Gaps = 35/283 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 19 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 69
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + + I A + YL
Sbjct: 70 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYL-- 124
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 125 -HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 180
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQD 482
+ P +SDV+ FG V+ E++ G+ P + I ++ + M+ R D
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI------IEMVGRGSLSPD 234
Query: 483 AVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
R N KR+ L C ERP IL I
Sbjct: 235 LSKVRSNC------PKRMKRLMAECLKKKRDERPSFPRILAEI 271
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 81
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 82 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 134
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 135 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL----- 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 192 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 247
Query: 468 --------VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRL 500
+D V+M+ R+ + DA D R ++ E ++
Sbjct: 248 LPQPPICTID-VYMIMRKCWMIDA-DSRPKFRELIIEFSKM 286
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 127/296 (42%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLAAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 53
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 113 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 164
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 55
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 115 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 165
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 ---TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 54
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 114 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEV 165
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 53
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 113 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 164
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 53
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 113 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 164
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 54
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 114 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 164
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 71
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 72 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 182 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 72
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 73 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 125
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 183 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 59
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 119 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 169
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 170 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 55
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 115 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 165
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 54
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 114 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 164
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M G L +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 62
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 122 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 172
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 173 ---TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 73
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 74 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 184 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 71
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 72 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 182 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 55
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 115 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 166
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 167 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 74
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 75 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 185 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 72
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 73 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 125
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 126 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 183 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 74
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 75 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL----- 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 185 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 240
Query: 468 --------VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRL 500
+D V+M+ R+ + DA D R ++ E ++
Sbjct: 241 LPQPPICTID-VYMIMRKCWMIDA-DSRPKFRELIIEFSKM 279
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 116 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 167
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 168 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 55
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 115 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 166
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 167 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 40/281 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 71
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 72 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL----- 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 182 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 237
Query: 468 --------VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRL 500
+D V+M+ R+ + DA D R ++ E ++
Sbjct: 238 LPQPPICTID-VYMIMRKCWMIDA-DSRPKFRELIIEFSKM 276
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 55
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 115 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 165
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 23 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 74
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M G L +L G + L + +AS + Y++
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N Y P + + APE
Sbjct: 133 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEYTARQGAKFP--IKWTAPE 185
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 228
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 229 ERGYRMPCPPECPESLHDLMCQCWRKDPEERP-TFEYLQAFLEDYFTSTEPQYQPG 283
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 62
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 122 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 172
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 173 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 55
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 115 LQGLAFC-------HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 166
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 167 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 36/296 (12%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 20 EVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEK 71
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
E+ + +V ++M GSL +L G + + L + +AS + Y++
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER 129
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VHRDL+A+NIL+ + ++ DFGLAR IE+ N + P + + APE
Sbjct: 130 ---MNYVHRDLRAANILVGENLVCKVADFGLARLIED--NEWTARQGAKFP--IKWTAPE 182
Query: 426 CFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAV 484
G+ T +SDV+ FG ++ E+ GR P + M++RE + D V
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVP---------------YPGMVNRE--VLDQV 225
Query: 485 DQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIISGTSTVPYVPQFKPA 540
++ + + + L L C ERP T + LQ PQ++P
Sbjct: 226 ERGYRMPCPPECPESLHDLMCQCWRKEPEERP-TFEYLQAFLEDYFTSTEPQYQPG 280
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 116 LQGLAFC-------HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 167
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 168 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 13/214 (6%)
Query: 244 HESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXX 302
H +G+G FG+VY G + DQ + Q A+K SR ++ FL E ++
Sbjct: 24 HSDRVIGKGHFGVVYHG--EYIDQAQ-NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 303 XXXXXXXXG-WCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
G +G ++ +M +G L +++ T+ + + VA +
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGME 138
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI-ENERNSYAEHGLVGVPGTMG 420
YL +QK VHRDL A N +LD F ++ DFGLAR I + E S +H +P +
Sbjct: 139 YLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--VK 193
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ A E T + T +SDV+ FG ++ E++ +P
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 54
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 114 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVV- 164
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 54
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 114 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVV- 164
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 57
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 117 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 168
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 169 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 73
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 74 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 184 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 74
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 75 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 185 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 71
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 72 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 124
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 182 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 96
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 97 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 149
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 150 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 207 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 257
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 54
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 114 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 165
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 74
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 75 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 127
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 128 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 185 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI---PVAIKELREATSPKANKEILDEAYVM 65
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 66 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 118
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 176 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 54
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 114 LQGLAFC-------HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 165
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 116 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 167
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 168 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 68
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 69 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 121
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 122 QIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 179 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 54
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 55 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 114 LQGLAFC-------HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 165
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 56
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 116 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEVV- 166
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 167 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 23/234 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIX 299
F + LG G FG VYKG+ I ++ + + +++ + S K+ + L E ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT--SPKANKEILDEAYVMA 106
Query: 300 XXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILTG 355
G C + L+ MP G L Y+ Q LNW
Sbjct: 107 SVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQ 159
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLVG 414
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 160 IAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 217 I----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 266
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 47/296 (15%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK-GDFLAELAIIXXXXXXXXX 307
LGEG FG V K H + T +AVK ++ S+ D L+E ++
Sbjct: 31 LGEGEFGKVVKATAFHL-KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---------------------EQVTLNW 346
G C + G LLL+ ++ GSL +L + ++ L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
++ + YL + K+VHRDL A NIL+ ++ DFGL+R + E +S
Sbjct: 150 GDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-DS 205
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAY 465
Y + +P + ++A E T +SDV+ FG ++ E+V G +P IP ++
Sbjct: 206 YVKRSQGRIP--VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260
Query: 466 TLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDI 521
++ L + GH + D + +E RL+ L C +RP DI
Sbjct: 261 -----LFNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 53
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+K++ T + L ++ +++
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 113 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 164
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 77
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 78 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 130
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 131 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 188 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 78
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 79 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 189 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 31 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ +L +V + SL +L+ + + + I A + YL
Sbjct: 82 ILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMK--KLIDIARQTARGMDYL-- 136
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGL A E R S H + G++ ++APE
Sbjct: 137 -HAKSIIHRDLKSNNIFLHEDNTVKIGDFGL--ATEKSRWS-GSHQFEQLSGSILWMAPE 192
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQD 482
+ P +SDV+ FG V+ E++ G+ P + I ++ + M+ R D
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI------IEMVGRGSLSPD 246
Query: 483 AVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
R N KR+ L C ERP IL I
Sbjct: 247 LSKVRSNC------PKRMKRLMAECLKKKRDERPSFPRILAEI 283
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
++LG+G FG V+ G + T++A+K ++ + FL E ++
Sbjct: 191 VKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKL 242
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
E+ + +V ++M GSL +L G + L + +AS + Y++
Sbjct: 243 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER- 299
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
VHRDL+A+NIL+ + ++ DFGL R IE+ N Y P + + APE
Sbjct: 300 --MNYVHRDLRAANILVGENLVCKVADFGLGRLIED--NEYTARQGAKFP--IKWTAPEA 353
Query: 427 FHTGKATPESDVFGFGAVVLEVVC-GRSP 454
G+ T +SDV+ FG ++ E+ GR P
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 35 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 85
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 86 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 140
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGL A E R S H + G++ ++APE
Sbjct: 141 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGL--ATEKSRWS-GSHQFEQLSGSILWMAPE 196
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 55
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G++ + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 115 GLSFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 165
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IK 286
P F + LKK + LGEG FG V + ++ +AVK D +
Sbjct: 8 PTVFHKRYLKKIRD-------LGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKADCGPQ 58
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ G C ++G+ L LV +++P GSL YL S +
Sbjct: 59 HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ 118
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+I G+A YL + Q +HR+L A N+LLD D ++GDFGLA+A+
Sbjct: 119 LLLFAQQICEGMA----YLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
Y P + + APEC K SDV+ FG + E++
Sbjct: 172 EYYRVREDGDSP--VFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 15 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 66 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 120
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGL A E R S H + G++ ++APE
Sbjct: 121 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGL--ATEKSRWS-GSHQFEQLSGSILWMAPE 176
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 32/242 (13%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSRD-SIK 286
R K EL+K LG G FG VYKGI I + + +A+K + S K
Sbjct: 12 RILKETELRKVKV-------LGSGAFGTVYKGIWIPDGENVKI---PVAIKVLRENTSPK 61
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQV 342
+ + L E ++ G C + LV MP G L ++ Q
Sbjct: 62 ANKEILDEAYVMAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQD 120
Query: 343 TLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN 402
LNW + +A + YL+ D ++VHRDL A N+L+ + + ++ DFGLAR ++
Sbjct: 121 LLNWCMQ------IAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
Query: 403 ERNSY-AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPH 460
+ Y A+ G V + ++A E + T +SDV+ +G V E++ G P + IP
Sbjct: 172 DETEYHADGGKVPI----KWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA 227
Query: 461 QQ 462
++
Sbjct: 228 RE 229
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G FG V+ + + T++AVK S+ + FLAE ++
Sbjct: 189 KLGAGQFGEVWMATYNKH-------TKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLV 240
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLY---GTSEQVTLNWNHRYKILTGVASAVYYLQ 364
K + ++ +FM GSL +L G+ + + + +I G+A + Q
Sbjct: 241 KLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA---FIEQ 296
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
Y +HRDL+A+NIL+ A ++ DFGLAR VG + + AP
Sbjct: 297 RNY----IHRDLRAANILVSASLVCKIADFGLAR--------------VGAKFPIKWTAP 338
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
E + G T +SDV+ FG +++E+V GR P
Sbjct: 339 EAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 43 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 94 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 148
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGL A E R S H + G++ ++APE
Sbjct: 149 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGL--ATEKSRWS-GSHQFEQLSGSILWMAPE 204
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LGEG FG VY+G+ ++ + +AVK +D ++ +K F++E I+
Sbjct: 16 LGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G E+ +++ + P G L YL + + Y + + A+ YL++
Sbjct: 73 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES-- 127
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRD+ NIL+ + +LGDFGL+R IE+E Y + + +P + +++PE
Sbjct: 128 -INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE--DYYKASVTRLP--IKWMSPESI 182
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ + T SDV+ F + E++ G+ P
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LGEG FG VY+G+ ++ + +AVK +D ++ +K F++E I+
Sbjct: 32 LGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G E+ +++ + P G L YL + + Y + + A+ YL++
Sbjct: 89 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES-- 143
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRD+ NIL+ + +LGDFGL+R IE+E Y + + +P + +++PE
Sbjct: 144 -INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE--DYYKASVTRLP--IKWMSPESI 198
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ + T SDV+ F + E++ G+ P
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 21/225 (9%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IK 286
P F + LKK + LGEG FG V + ++ +AVK D +
Sbjct: 8 PTVFHKRYLKKIRD-------LGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKADCGPQ 58
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ G C ++G+ L LV +++P GSL YL S +
Sbjct: 59 HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ 118
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+I G+A YL + Q +HR+L A N+LLD D ++GDFGLA+A+
Sbjct: 119 LLLFAQQICEGMA----YL---HAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH 171
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
Y P + + APEC K SDV+ FG + E++
Sbjct: 172 EYYRVREDGDSP--VFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P F+ + LK + LG+G FG V + ++ +AVK+
Sbjct: 2 PQDPTIFEERHLKYISQ-------LGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSG 52
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQV 342
+ DF E+ I+ G + G+ L LV +++P+G L +L +
Sbjct: 53 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRA 110
Query: 343 TLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN 402
L+ + + + + YL + ++ VHRDL A NIL++++ + ++ DFGLA+ +
Sbjct: 111 RLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 167
Query: 403 ERNSYAEHGLVGVPGT--MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+++ Y +V PG + + APE + +SDV+ FG V+ E+
Sbjct: 168 DKDYY----VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVK+ + DF E+ I+
Sbjct: 17 QLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 74
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G + G+ L LV +++P+G L +L + L+ + + + + YL +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ VHRDL A NIL++++ + ++ DFGLA+ + +++ Y +V PG + + A
Sbjct: 133 ---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIFWYA 185
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE + +SDV+ FG V+ E+
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 242 NFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKK---FSRDSIKSKGDFLAELAII 298
NF ++G G F VY+ +D +A+KK F K++ D + E+ ++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACL------LDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR-YKILTGVA 357
E +L +V + G L + + +Q L +K +
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
SA L++ + ++V+HRD+K +N+ + A +LGD GL R ++ + A H LVG P
Sbjct: 147 SA---LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTP- 200
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
Y++PE H +SD++ G ++ E+ +SP
Sbjct: 201 --YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+ K D+ +++G + E+++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDT-ETEGVPSTAIREISL 55
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 115 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 165
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 166 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+ K D+ +++G + E+++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDT-ETEGVPSTAIREISL 54
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++F+ + L+K++ T + L ++ +++L
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 114 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 164
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 75
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 76 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 128
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFG A+ + E Y AE G V
Sbjct: 129 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 186 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXXX 307
LGEG FG VY+G+ ++ + +AVK +D ++ +K F++E I+
Sbjct: 20 LGEGFFGEVYEGVYTNHKG---EKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G E+ +++ + P G L YL + + Y + + A+ YL++
Sbjct: 77 KLIGIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES-- 131
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
VHRD+ NIL+ + +LGDFGL+R IE+E Y + + +P + +++PE
Sbjct: 132 -INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE--DYYKASVTRLP--IKWMSPESI 186
Query: 428 HTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ + T SDV+ F + E++ G+ P
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 53
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+ ++ T + L ++ +++
Sbjct: 54 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL 112
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 113 LQGLAFC-------HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 164
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 73
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 74 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFG A+ + E Y AE G V
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL----- 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 184 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 468 --------VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRL 500
+D V+M+ R+ + DA D R ++ E ++
Sbjct: 240 LPQPPICTID-VYMIMRKCWMIDA-DSRPKFRELIIEFSKM 278
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+ ++ T + L ++ +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 116 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 167
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 168 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + L G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 78
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 79 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 189 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+ ++ T + L ++ +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 116 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 167
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 168 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + L G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 71
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 72 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 182 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 32 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 83
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 138
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + VG + + PE
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS----VGSKFPVRWSPPEVLM 194
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 238
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVK+ + DF E+ I+
Sbjct: 30 QLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G + G+ L LV +++P+G L +L + L+ + + + + YL +
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ VHRDL A NIL++++ + ++ DFGLA+ + +++ Y +V PG + + A
Sbjct: 146 ---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIFWYA 198
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE + +SDV+ FG V+ E+
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
+ LV+D M G L YL +E+V L+ I+ + AV +L + +VHRDLK
Sbjct: 175 MFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLLEAVSFL---HANNIVHRDLKP 228
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF-------HTGK 431
NILLD + RL DFG + +E L + GT GY+APE H G
Sbjct: 229 ENILLDDNMQIRLSDFGFSCHLE------PGEKLRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 432 ATPESDVFGFGAVVLEVVCGRSPG---------NMIPHQQHAYTLVDWVWMLHREGHIQD 482
E D++ G ++ ++ G P MI Q+ ++ +W R ++D
Sbjct: 283 GK-EVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWD---DRSSTVKD 338
Query: 483 AVDQRLNIN 491
+ + L ++
Sbjct: 339 LISRLLQVD 347
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 55
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++F+ + L+ ++ T + L ++ +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 115 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 166
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 167 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 73
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 74 ASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFG A+ + E Y AE G V
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 184 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 73
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 74 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFG A+ + E Y AE G V
Sbjct: 127 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL----- 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 184 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 239
Query: 468 --------VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRL 500
+D V+M+ R+ + DA D R ++ E ++
Sbjct: 240 LPQPPICTID-VYMIMRKCWMIDA-DSRPKFRELIIEFSKM 278
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 71
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 72 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 124
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFG A+ + E Y AE G V
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 182 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 17 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 67
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 68 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 122
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 123 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 178
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + L G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 78
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 79 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFGLA+ + E Y AE G V
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 189 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFDPDD---NHLG 71
G+ F +AP + P +S G +LG+T++ N N FVA+EFD+ +DP +H+G
Sbjct: 81 GVVFFLAPWGTEIPPNSQGGYLGITDS---SNSQNQFVAVEFDSHPNVWDPKSLRSSHIG 137
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKE 131
+++NS++S K V N+N G+ + YD +K++ V M + Q + +
Sbjct: 138 IDVNSIMSLKAV----NWNRV--SGSLEKATIIYDSDTKILTVVMTHQNG---QITTISQ 188
Query: 132 TINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTL 166
I+LK L + GFSA+T P + + + SW+
Sbjct: 189 EIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSF 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 42 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 92
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 93 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 147
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 148 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 203
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 5 PRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFD 64
PRP GL F IAP ++ E G + G+ N + FVA+EFDT + +D
Sbjct: 81 PRPH---PADGLVFFIAPPNTQTGEG--GGYFGIYNPLS----PYPFVAVEFDTFRNTWD 131
Query: 65 PDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMP 124
P H+G+++NSV+S K VP TL +G V ++YD +K++ V + ++
Sbjct: 132 PQIPHIGIDVNSVISTKTVPF------TLDNGGIANVVIKYDASTKILHVVL--VFPSLG 183
Query: 125 QKPLLKETINLKDYLKPESYFGFSASTGYP 154
+ + ++LK L GFSA+TG P
Sbjct: 184 TIYTIADIVDLKQVLPESVNVGFSAATGDP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 20 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 71 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 125
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 126 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 181
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 15 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 66 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 120
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 121 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 176
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 16 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 67
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 122
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + VG + + PE
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLM 178
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 222
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 223 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 259
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 25/235 (10%)
Query: 241 NNFHESMRLGEGGFGIVYKGI-IHHNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAII 298
F + LG G FG VYKG+ I ++ + +A+K+ S K+ + L E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIP---VAIKELREATSPKANKEILDEAYVM 78
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY----GTSEQVTLNWNHRYKILT 354
G C + L+ MP G L Y+ Q LNW
Sbjct: 79 ASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 131
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY-AEHGLV 413
+A + YL+ D+++VHRDL A N+L+ + ++ DFG A+ + E Y AE G V
Sbjct: 132 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTL 467
+ ++A E T +SDV+ +G V E++ G P + IP + + L
Sbjct: 189 PI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 20 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 70
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 71 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 125
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 126 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 181
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 5 PRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFD 64
PRP GL F IAP ++ E G + G+ N + FVA+EFDT + +D
Sbjct: 82 PRPH---PADGLVFFIAPPNTQTGEG--GGYFGIYNPLS----PYPFVAVEFDTFRNTWD 132
Query: 65 PDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMP 124
P H+G+++NSV+S K VP TL +G V ++YD +K++ V + ++
Sbjct: 133 PQIPHIGIDVNSVISTKTVPF------TLDNGGIANVVIKYDASTKILHVVL--VFPSLG 184
Query: 125 QKPLLKETINLKDYLKPESYFGFSASTGYP 154
+ + ++LK L GFSA+TG P
Sbjct: 185 TIYTIADIVDLKQVLPESVNVGFSAATGDP 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 17 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 68
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 123
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + VG + + PE
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLM 179
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 223
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 224 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
Query: 5 PRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFD 64
PRP GL F IAP ++ E G + G+ N + FVA+EFDT + +D
Sbjct: 81 PRPH---PADGLVFFIAPPNTQTGEG--GGYFGIYNPLS----PYPFVAVEFDTFRNTWD 131
Query: 65 PDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMP 124
P H+G+++NSV+S K VP TL +G V ++YD +K++ V + ++
Sbjct: 132 PQIPHIGIDVNSVISTKTVPF------TLDNGGIANVVIKYDASTKILHVVL--VFPSLG 183
Query: 125 QKPLLKETINLKDYLKPESYFGFSASTGYP 154
+ + ++LK L GFSA+TG P
Sbjct: 184 TIYTIADIVDLKQVLPESVNVGFSAATGDP 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 32 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 83
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 138
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + VG + + PE
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLM 194
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 238
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PRE+ NF +++GEG GIV H + Q+AVKK
Sbjct: 40 PGDPREY--------LANF---IKIGEGSTGIVCIATEKHTGK------QVAVKKMDLRK 82
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 83 QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR----M 138
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ YL N Q V+HRD+K+ +ILL +D +L DFG + E
Sbjct: 139 NEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV 195
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE E D++ G +V+E++ G P
Sbjct: 196 PK--RKXLVGTP---YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 430
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 431 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 486
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 487 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 541
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 43 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K +L +V + SL +L+ + + I A + YL
Sbjct: 94 ILLFMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 148
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 149 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 204
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V K D +A+K+ +S + F+ EL +
Sbjct: 17 VGRGAFGVVCKAKWRAKD--------VAIKQIESES--ERKAFIVELRQLSRVNHPNIVK 66
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C + LV ++ GSL L+G H + V YL +
Sbjct: 67 LYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 369 QKVVHRDLKASNILLDADFNA-RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ ++HRDLK N+LL A ++ DFG A I+ + G+ ++APE F
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--------MTNNKGSAAWMAPEVF 176
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSPGNMI 458
+ + DVF +G ++ EV+ R P + I
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 431
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 432 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 487
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 488 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 542
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 12 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 63
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 118
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + VG + + PE
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLM 174
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 218
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 219 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 23 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 74
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 129
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + VG + + PE
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS----VGSKFPVRWSPPEVLM 185
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 229
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 230 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 266
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G FG+V K D +A+K+ +S + F+ EL +
Sbjct: 16 VGRGAFGVVCKAKWRAKD--------VAIKQIESES--ERKAFIVELRQLSRVNHPNIVK 65
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C + LV ++ GSL L+G H + V YL +
Sbjct: 66 LYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 369 QKVVHRDLKASNILLDADFNA-RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+ ++HRDLK N+LL A ++ DFG A I+ + G+ ++APE F
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--------MTNNKGSAAWMAPEVF 175
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSPGNMI 458
+ + DVF +G ++ EV+ R P + I
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNK-ANHFVAIEFDTV----KQGFDPDDNH 69
G+AF IAP D+ P S G LGL N T N+ AN +A+EFDT +DP+ H
Sbjct: 96 GIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQH 155
Query: 70 LGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMP--QKP 127
+G+++NS+ S K V + +G + V V Y+ ++ I V T P Q+
Sbjct: 156 IGIDVNSIRSSKVVRWERR------EGKTLNVLVTYNPSTRTIDVVA-----TYPDGQRY 204
Query: 128 LLKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQTKKEKD 178
L ++L L GFSA++G Q + + SW+ ++ T +++D
Sbjct: 205 QLSHVVDLTTILPEWVRVGFSAASG-EQFQTHNLESWSFTSTLLYTAQKED 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 72
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 73 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP--VKWYAP 183
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 123/296 (41%), Gaps = 47/296 (15%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK-GDFLAELAIIXXXXXXXXX 307
LGEG FG V K H + T +AVK ++ S+ D L+E ++
Sbjct: 31 LGEGEFGKVVKATAFHL-KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---------------------EQVTLNW 346
G C + G LLL+ ++ GSL +L + ++ L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
++ + YL + K+VHRDL A NIL+ ++ DFGL+R + E +S
Sbjct: 150 GDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-DS 205
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAY 465
+ +P + ++A E T +SDV+ FG ++ E+V G +P IP ++
Sbjct: 206 XVKRSQGRIP--VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260
Query: 466 TLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDI 521
++ L + GH + D + +E RL+ L C +RP DI
Sbjct: 261 -----LFNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 88
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 89 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 199
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 88
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 89 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 199
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 111/227 (48%), Gaps = 29/227 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
+ NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREI 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKI 352
+++ H + KL LV++ + + L+K++ T + L ++ +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
L G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +
Sbjct: 116 LQGLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX-HEV 167
Query: 413 VGVPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
V T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 168 V----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 24/253 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVK--KFSRDSIKSKGDFLAELAIIXXXXXXXX 306
LGEG FG V +G + D + ++AVK K S + +FL+E A +
Sbjct: 42 LGEGEFGSVMEGNLKQEDG---TSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 307 XXXXGWCHEKG-----KLLLVYDFMPNGSLEKYLYGTSEQVT---LNWNHRYKILTGVAS 358
G C E K +++ FM G L YL + + + K + +A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT 418
+ YL N + +HRDL A N +L D + DFGL++ I + + Y + + +P
Sbjct: 159 GMEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG-DYYRQGRIAKMP-- 212
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAYTLVDWVWMLHRE 477
+ ++A E T +SDV+ FG + E+ G +P P Q+ + + D++ HR
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP---YPGVQN-HEMYDYLLHGHRL 268
Query: 478 GHIQDAVDQRLNI 490
+D +D+ I
Sbjct: 269 KQPEDCLDELYEI 281
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 86
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 87 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 142
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 143 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 197
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 72
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 73 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 183
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 78
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 79 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 189
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 68
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 69 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 124
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 179
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 245 ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX 304
E LG G FG V KG +I + + ++K + LAE ++
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNP 66
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C E +LV + G L KYL + + + +++ V+ + YL+
Sbjct: 67 YIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLE 122
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ VHRDL A N+LL A++ DFGL++A+ + N Y P + + AP
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP--VKWYAP 177
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
EC + K + +SDV+ FG ++ E G+ P
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX-XXX 307
+GEG FG V K I D +D +K+++ S DF EL ++
Sbjct: 33 IGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNII 89
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYL-------------YGTSEQVTLNWNHRYKILT 354
G C +G L L ++ P+G+L +L S TL+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
VA + YL ++ +HRDL A NIL+ ++ A++ DFGL+R E V
Sbjct: 150 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE-----------VY 195
Query: 415 VPGTMG-----YVAPECFHTGKATPESDVFGFGAVVLEVV-------CGRSPGNMIPHQQ 462
V TMG ++A E + T SDV+ +G ++ E+V CG + +
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 463 HAYTL 467
Y L
Sbjct: 256 QGYRL 260
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX-XXX 307
+GEG FG V K I D +D +K+++ S DF EL ++
Sbjct: 23 IGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNII 79
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYL-------------YGTSEQVTLNWNHRYKILT 354
G C +G L L ++ P+G+L +L S TL+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
VA + YL ++ +HRDL A NIL+ ++ A++ DFGL+R E V
Sbjct: 140 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE-----------VY 185
Query: 415 VPGTMG-----YVAPECFHTGKATPESDVFGFGAVVLEVV-------CGRSPGNMIPHQQ 462
V TMG ++A E + T SDV+ +G ++ E+V CG + +
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 245
Query: 463 HAYTL 467
Y L
Sbjct: 246 QGYRL 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 96/240 (40%), Gaps = 35/240 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS----RDSIKSKGDFLAELAIIXXXXXX 304
+G G +G VYKG +D +AVK FS ++ I K + L
Sbjct: 21 IGRGRYGAVYKG--------SLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
+ + LLV ++ PNGSL KYL T +W ++ V + YL
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLH 128
Query: 365 NE------YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENE---RNSYAEHGLVGV 415
E Y + HRDL + N+L+ D + DFGL+ + R ++ +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 416 PGTMGYVAPECFHTG-------KATPESDVFGFGAVVLEVVCGRS---PGNMIPHQQHAY 465
GT+ Y+APE A + D++ G + E+ + PG +P Q A+
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF 248
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG+G FG V + ++ +AVK+ + DF E+ I+
Sbjct: 14 QLGKGNFGSV--ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 71
Query: 308 XXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G + G+ L LV +++P+G L +L + L+ + + + + YL +
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGT--MGYVA 423
++ VHRDL A NIL++++ + ++ DFGLA+ + +++ +V PG + + A
Sbjct: 130 ---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXX----VVREPGQSPIFWYA 182
Query: 424 PECFHTGKATPESDVFGFGAVVLEV 448
PE + +SDV+ FG V+ E+
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 246 SMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXX 305
S R+G G FG VYKG ++H D + + K + + F E+A++
Sbjct: 41 STRIGSGSFGTVYKG------KWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVN 93
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ K L +V + SL K+L+ ++ I A + YL
Sbjct: 94 ILLFMGYM-TKDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYL-- 148
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP-GTMGYVAP 424
+ + ++HRD+K++NI L ++GDFGLA ++ ++ V P G++ ++AP
Sbjct: 149 -HAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAP 203
Query: 425 ECFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
E P +SDV+ +G V+ E++ G P + I ++ +V
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 33/277 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG G FG+V G QY V A+K S+ S+ +F+ E ++
Sbjct: 17 LGTGQFGVVKYG--KWRGQYDV-----AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQ 68
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G C ++ + ++ ++M NG L YL + ++ V A+ YL++
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES--- 123
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ +HRDL A N L++ ++ DFGL+R + ++ + + G + + PE
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR----GSKFPVRWSPPEVLM 179
Query: 429 TGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRL 488
K + +SD++ FG ++ E+ S G M P+++ + + Q L
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIY---SLGKM-PYERFT------------NSETAEHIAQGL 223
Query: 489 NINSVVDEAKRLLLLGLACSHPIASERPKTEDILQII 525
+ ++++ + +C H A ERP + +L I
Sbjct: 224 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXX 305
R+G G FG VYKG ++H D +AVK + + + F E+ ++
Sbjct: 15 RIGSGSFGTVYKG------KWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G+ +L +V + SL +L+ + + I A + YL
Sbjct: 66 ILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMI--KLIDIARQTAQGMDYL-- 120
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+ + ++HRDLK++NI L D ++GDFGLA S H + G++ ++APE
Sbjct: 121 -HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS---HQFEQLSGSILWMAPE 176
Query: 426 CFHTGKATP---ESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
P +SDV+ FG V+ E++ G+ P + I ++ +V
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS----IKSKGDFLAELA 296
+ + ++GEG +G+VYK + Q + +A+K+ D+ I S + E++
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA---KDSQGRI----VALKRIRLDAEDEGIPSTA--IREIS 71
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILT 354
++ H + L LV++FM L+K L T Q + + Y++L
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
GVA + +++HRDLK N+L+++D +L DFGLARA SY H +V
Sbjct: 131 GVAHC-------HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT-HEVV- 181
Query: 415 VPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGR 452
T+ Y AP+ K S D++ G + E++ G+
Sbjct: 182 ---TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 29/219 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS----IKSKGDFLAELA 296
+ + ++GEG +G+VYK + Q + +A+K+ D+ I S + E++
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA---KDSQGRI----VALKRIRLDAEDEGIPSTA--IREIS 71
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILT 354
++ H + L LV++FM L+K L T Q + + Y++L
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
GVA + +++HRDLK N+L+++D +L DFGLARA SY H +V
Sbjct: 131 GVAHC-------HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT-HEVV- 181
Query: 415 VPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGR 452
T+ Y AP+ K S D++ G + E++ G+
Sbjct: 182 ---TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG+G FG K + H + V + +K+ R +++ FL E+ ++
Sbjct: 18 LGKGCFGQAIK--VTHRETGEV----MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G ++ +L + +++ G+L + Q W+ R +AS + YL +
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP--WSQRVSFAKDIASGMAYL---HS 126
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENER------------NSYAEHGLVGVP 416
++HRDL + N L+ + N + DFGLAR + +E+ + + +VG P
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNP 186
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
++APE + + DVF FG V+ E++
Sbjct: 187 ---YWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+GKL L+ DF+ G L L S++V L +A A+ +L + +++RD
Sbjct: 98 EGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRD 151
Query: 376 LKASNILLDADFNARLGDFGLAR-AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATP 434
LK NILLD + + +L DFGL++ +I++E+ +Y+ GT+ Y+APE + T
Sbjct: 152 LKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS------FCGTVEYMAPEVVNRRGHTQ 205
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
+D + FG ++ E++ G P
Sbjct: 206 SADWWSFGVLMFEMLTGTLP 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS---KGDFLAELAIIXXXXXXX 305
LG G FG V G ++ + ++AVK +R I+S G E+ +
Sbjct: 24 LGVGTFGKVKVG------KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ +V +++ G L Y+ L+ ++ + S V Y
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHR 134
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VVHRDLK N+LLDA NA++ DFGL+ + + L G+ Y APE
Sbjct: 135 ---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE------FLRXSCGSPNYAAPE 185
Query: 426 CFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
+G+ A PE D++ G ++ ++CG P
Sbjct: 186 VI-SGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK-GDFLAELAIIXXXXXXXXX 307
LGEG FG V K H + T +AVK ++ S+ D L+E ++
Sbjct: 31 LGEGEFGKVVKATAFHL-KGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---------------------EQVTLNW 346
G C + G LLL+ ++ GSL +L + ++ L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
++ + YL + +VHRDL A NIL+ ++ DFGL+R + E +S
Sbjct: 150 GDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDV-YEEDS 205
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSPGNMIPHQQHAY 465
+ +P + ++A E T +SDV+ FG ++ E+V G +P IP ++
Sbjct: 206 XVKRSQGRIP--VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--- 260
Query: 466 TLVDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDI 521
++ L + GH + D + +E RL+ L C +RP DI
Sbjct: 261 -----LFNLLKTGHRMERPD------NCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+GKL L+ DF+ G L L S++V L +A A+ +L + +++RD
Sbjct: 98 EGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHL---HSLGIIYRD 151
Query: 376 LKASNILLDADFNARLGDFGLAR-AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATP 434
LK NILLD + + +L DFGL++ +I++E+ +Y+ GT+ Y+APE + T
Sbjct: 152 LKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS------FCGTVEYMAPEVVNRRGHTQ 205
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
+D + FG ++ E++ G P
Sbjct: 206 SADWWSFGVLMFEMLTGTLP 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKLNHQN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 209
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+GKL L+ DF+ G L L S++V L +A A+ +L + +++RD
Sbjct: 99 EGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHL---HSLGIIYRD 152
Query: 376 LKASNILLDADFNARLGDFGLAR-AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATP 434
LK NILLD + + +L DFGL++ +I++E+ +Y+ GT+ Y+APE + T
Sbjct: 153 LKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS------FCGTVEYMAPEVVNRRGHTQ 206
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
+D + FG ++ E++ G P
Sbjct: 207 SADWWSFGVLMFEMLTGTLP 226
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 209
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 75
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES--- 129
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI----KWMAPESIN 185
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 18/140 (12%)
Query: 321 LVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
LV +++ +L +Y+ S +N+ ++ IL G+ A +D ++VHRD+K
Sbjct: 88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ--ILDGIKHA-------HDMRIVHRDIK 138
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE-S 436
NIL+D++ ++ DFG+A+A+ + H L GT+ Y +PE G+AT E +
Sbjct: 139 PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL----GTVQYFSPEQAK-GEATDECT 193
Query: 437 DVFGFGAVVLEVVCGRSPGN 456
D++ G V+ E++ G P N
Sbjct: 194 DIYSIGIVLYEMLVGEPPFN 213
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 111
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 172 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 225
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 101
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 162 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 215
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
NF + ++GEG +G+VYK + + +A+KK D+ +++G + E+++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDT-ETEGVPSTAIREISL 54
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILT 354
+ H + KL LV++ + + L+ ++ T + L ++ +++L
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
G+A + +V+HRDLK N+L++ + +L DFGLARA +Y H +V
Sbjct: 114 GLAFC-------HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT-HEVV- 164
Query: 415 VPGTMGYVAPECFHTGK-ATPESDVFGFGAVVLEVVCGRS--PGN 456
T+ Y APE K + D++ G + E+V R+ PG+
Sbjct: 165 ---TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 121
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 182 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 235
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 208
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 208
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 29/260 (11%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IK 286
P F + LKK + LGEG FG V + ++ +AVK +
Sbjct: 3 PTVFHKRYLKKIRD-------LGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKEGCGPQ 53
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ G C ++G+ + LV +++P GSL YL +
Sbjct: 54 LRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ 113
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+I G+A YL + Q +HR L A N+LLD D ++GDFGLA+A+
Sbjct: 114 LLLFAQQICEGMA----YL---HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV--C--GRSP----GN 456
Y P + + APEC K SDV+ FG + E++ C +SP
Sbjct: 167 EYYRVREDGDSP--VFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTE 224
Query: 457 MIPHQQHAYTLVDWVWMLHR 476
+I H Q T++ +L R
Sbjct: 225 LIGHTQGQMTVLRLTELLER 244
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKLNHQN 109
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 223
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KG 289
K ELK ++F + LG G G+V+K H + + +K IK +
Sbjct: 18 KVGELK--DDDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRN 68
Query: 290 DFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNW 346
+ EL ++ G + G++ + + M GSL++ L EQ+
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL--- 125
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERN 405
K+ V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ N
Sbjct: 126 ---GKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 180
Query: 406 SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
S+ GT Y++PE + +SD++ G ++E+ GR P +
Sbjct: 181 SFV--------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
Query: 466 TLVDWV 471
L+D++
Sbjct: 233 ELLDYI 238
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L L+ ++ G + YL +++ + SAV Y + +++VHRDLKA
Sbjct: 89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYC---HQKRIVHRDLKA 142
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHG-LVGVPGTMGYVAPECFHTGKAT-PES 436
N+LLDAD N ++ DFG + N + G L G Y APE F K PE
Sbjct: 143 ENLLLDADMNIKIADFGFS-------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEV 195
Query: 437 DVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 196 DVWSLGVILYTLVSGSLP 213
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 86
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 147 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 200
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 29/260 (11%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS-IK 286
P F + LKK + LGEG FG V + ++ +AVK +
Sbjct: 2 PTVFHKRYLKKIRD-------LGEGHFGKV--SLYCYDPTNDGTGEMVAVKALKEGCGPQ 52
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK--LLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ G C ++G+ + LV +++P GSL YL +
Sbjct: 53 LRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ 112
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+I G+A YL + Q +HR L A N+LLD D ++GDFGLA+A+
Sbjct: 113 LLLFAQQICEGMA----YL---HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV--C--GRSP----GN 456
Y P + + APEC K SDV+ FG + E++ C +SP
Sbjct: 166 EYYRVREDGDSP--VFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTE 223
Query: 457 MIPHQQHAYTLVDWVWMLHR 476
+I H Q T++ +L R
Sbjct: 224 LIGHTQGQMTVLRLTELLER 243
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 109
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 223
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L L+ ++ G + YL +++ + SAV Y + +++VHRDLKA
Sbjct: 86 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYC---HQKRIVHRDLKA 139
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHG-LVGVPGTMGYVAPECFHTGKAT-PES 436
N+LLDAD N ++ DFG + N + G L G+ Y APE F K PE
Sbjct: 140 ENLLLDADMNIKIADFGFS-------NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEV 192
Query: 437 DVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 193 DVWSLGVILYTLVSGSLP 210
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXX-XXX 307
+GEG FG V K I D +D +K+++ S DF EL ++
Sbjct: 30 IGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNII 86
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYL-------------YGTSEQVTLNWNHRYKILT 354
G C +G L L ++ P+G+L +L S TL+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG 414
VA + YL ++ +HR+L A NIL+ ++ A++ DFGL+R E V
Sbjct: 147 DVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSRGQE-----------VY 192
Query: 415 VPGTMG-----YVAPECFHTGKATPESDVFGFGAVVLEVV-------CGRSPGNMIPHQQ 462
V TMG ++A E + T SDV+ +G ++ E+V CG + +
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 252
Query: 463 HAYTL 467
Y L
Sbjct: 253 QGYRL 257
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y +Y +VHRDLKA
Sbjct: 89 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY---IVHRDLKA 142
Query: 379 SNILLDADFNARLGDFGLAR--AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLD D N ++ DFG + + N+ +++ G+ Y APE F K PE
Sbjct: 143 ENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--------GSPPYAAPELFQGKKYDGPE 194
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 195 VDVWSLGVILYTLVSGSLP 213
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXX 306
RLG GGFG V + I H D Q+A+K+ ++ S K++ + E+ I+
Sbjct: 22 RLGTGGFGYVLRWI--HQD----TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 307 XXXXGWCHEKGKL------LLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
KL LL ++ G L KYL L +L+ ++SA+
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 361 YYLQNEYDQKVVHRDLKASNILLD---ADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
YL ++ +++HRDLK NI+L ++ D G A+ ++ G
Sbjct: 136 RYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG------ELCTEFVG 186
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
T+ Y+APE K T D + FG + E + G P
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXXX 306
RLG GGFG V + I H D Q+A+K+ ++ S K++ + E+ I+
Sbjct: 21 RLGTGGFGYVLRWI--HQD----TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 307 XXXXGWCHEKGKL------LLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
KL LL ++ G L KYL L +L+ ++SA+
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 361 YYLQNEYDQKVVHRDLKASNILLD---ADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
YL ++ +++HRDLK NI+L ++ D G A+ ++ G
Sbjct: 135 RYL---HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG------ELCTEFVG 185
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
T+ Y+APE K T D + FG + E + G P
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LV+D M G L YL +E+VTL+ KI+ + + L + +VHRDLK
Sbjct: 99 FFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKP 152
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF-------HTGK 431
NILLD D N +L DFG + ++ L V GT Y+APE H G
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEK------LRSVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
E D++ G ++ ++ G P
Sbjct: 207 GK-EVDMWSTGVIMYTLLAGSPP 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KG 289
K ELK ++F + LG G G+V+K H + + +K IK +
Sbjct: 61 KVGELKD--DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRN 111
Query: 290 DFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNW 346
+ EL ++ G + G++ + + M GSL++ L EQ+
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL--- 168
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERN 405
K+ V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ N
Sbjct: 169 ---GKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 223
Query: 406 SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
S+ GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 224 SFV--------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 75
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES--- 129
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ A +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 185
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 135
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I Y + G +P
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-GYYRKGGCAMLP-- 249
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIHH--NDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 112
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I Y + G +P
Sbjct: 173 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-GYYRKGGCAMLP-- 226
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSRD-SIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVYSEQDELDFLMEALIISKFNHQN 109
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+AR I + Y + G +P
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-SYYRKGGCAMLP-- 223
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 227 MPREFKYKELKKATNNFHESMRLGEGGFGIVYKGI-IHHNDQYHVD-NTQIAVKKFSRDS 284
+ R FK EL+K LG G FG V+KG+ I + + ++ K R S
Sbjct: 6 LARIFKETELRKLKV-------LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS 58
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL----EKYLYGTSE 340
++ D + I G C L LV ++P GSL ++
Sbjct: 59 FQAVTD---HMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP 114
Query: 341 QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI 400
Q+ LNW +A +YYL+ + +VHR+L A N+LL + ++ DFG+A +
Sbjct: 115 QLLLNWG------VQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
Query: 401 --ENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
++++ Y+E + ++A E H GK T +SDV+ +G V E++
Sbjct: 166 PPDDKQLLYSE-----AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
+H ++GEG +G+VYK ++ + + + ++ + + I S + E++I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTT--IREISILKELK 58
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL---YGTSEQVTLNWNHRYKILTGVASA 359
H K +L+LV++ + + L+K L G E VT + ++L G+A
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYC 116
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+D++V+HRDLK N+L++ + ++ DFGLARA Y H +V T+
Sbjct: 117 -------HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT-HEIV----TL 164
Query: 420 GYVAPECFH-TGKATPESDVFGFGAVVLEVVCG 451
Y AP+ + K + D++ G + E+V G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 33/231 (14%)
Query: 227 MPREFKYKELKKATNNFHESMRLGEGGFGIVYKGI-IHHNDQYHVD-NTQIAVKKFSRDS 284
+ R FK EL+K LG G FG V+KG+ I + + ++ K R S
Sbjct: 24 LARIFKETELRKLKV-------LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS 76
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL----EKYLYGTSE 340
++ D + I G C L LV ++P GSL ++
Sbjct: 77 FQAVTD---HMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGP 132
Query: 341 QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI 400
Q+ LNW +A +YYL+ + +VHR+L A N+LL + ++ DFG+A +
Sbjct: 133 QLLLNWG------VQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
Query: 401 --ENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
++++ Y+E + ++A E H GK T +SDV+ +G V E++
Sbjct: 184 PPDDKQLLYSE-----AKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 106 KLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 157
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A+
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSASKS 214
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS---KGDFLAELAIIXXXXXXX 305
LG G FG V G ++ + ++AVK +R I+S G E+ +
Sbjct: 19 LGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYL 363
+V +++ G L Y+ +G E++ ++ + SAV Y
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-----RLFQQILSAVDYC 127
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAI---ENERNSYAEHGLVGVPGTMG 420
VVHRDLK N+LLDA NA++ DFGL+ + E R+S G+
Sbjct: 128 HR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---------CGSPN 175
Query: 421 YVAPECFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
Y APE +G+ A PE D++ G ++ ++CG P
Sbjct: 176 YAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAI 297
+ ++F E LG+G FG V K + +D+ A+KK R + + L+E+ +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI-RHTEEKLSTILSEVML 55
Query: 298 IXXXX-XXXXXXXXGWCH------------EKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ W +K L + ++ NG+L ++ SE +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH--SENLNQ 113
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+ +++ + A+ Y+ + Q ++HRDLK NI +D N ++GDFGLA+ +
Sbjct: 114 QRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 405 NSY---------AEHGLVGVPGTMGYVAPECFH-TGKATPESDVFGFGAVVLEVVCGRSP 454
+ + L GT YVA E TG + D++ G + E++ S
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 455 G 455
G
Sbjct: 231 G 231
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LV+D M G L YL +E+VTL+ KI+ + + L + +VHRDLK
Sbjct: 86 FFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKP 139
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF-------HTGK 431
NILLD D N +L DFG + ++ L V GT Y+APE H G
Sbjct: 140 ENILLDDDMNIKLTDFGFSCQLD------PGEKLREVCGTPSYLAPEIIECSMNDNHPGY 193
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
E D++ G ++ ++ G P
Sbjct: 194 GK-EVDMWSTGVIMYTLLAGSPP 215
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
+H ++GEG +G+VYK ++ + + + ++ + + I S + E++I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTT--IREISILKELK 58
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL---YGTSEQVTLNWNHRYKILTGVASA 359
H K +L+LV++ + + L+K L G E VT + ++L G+A
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYC 116
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+D++V+HRDLK N+L++ + ++ DFGLARA Y H +V T+
Sbjct: 117 -------HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT-HEVV----TL 164
Query: 420 GYVAPECFH-TGKATPESDVFGFGAVVLEVVCG 451
Y AP+ + K + D++ G + E+V G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS---KGDFLAELAIIXXXXXXX 305
LG G FG V G ++ + ++AVK +R I+S G E+ +
Sbjct: 19 LGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYL 363
+V +++ G L Y+ +G E++ ++ + SAV Y
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-----RLFQQILSAVDYC 127
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
VVHRDLK N+LLDA NA++ DFGL+ + + L G+ Y A
Sbjct: 128 HR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF------LRTSCGSPNYAA 178
Query: 424 PECFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
PE +G+ A PE D++ G ++ ++CG P
Sbjct: 179 PEVI-SGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAII 298
++F + LG G G+V+K H + + +K IK + + EL ++
Sbjct: 6 DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTG 355
G + G++ + + M GSL++ L EQ+ K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL------GKVSIA 112
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAEHGLVG 414
V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ NS+
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------ 164
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 165 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
+H ++GEG +G+VYK ++ + + + ++ + + I S + E++I+
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTT--IREISILKELK 58
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL---YGTSEQVTLNWNHRYKILTGVASA 359
H K +L+LV++ + + L+K L G E VT + ++L G+A
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYC 116
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+D++V+HRDLK N+L++ + ++ DFGLARA Y H +V T+
Sbjct: 117 -------HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT-HEVV----TL 164
Query: 420 GYVAPECFH-TGKATPESDVFGFGAVVLEVVCG 451
Y AP+ + K + D++ G + E+V G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KG 289
K ELK ++F + LG G G+V+K H + + +K IK +
Sbjct: 26 KVGELK--DDDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRN 76
Query: 290 DFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNW 346
+ EL ++ G + G++ + + M GSL++ L EQ+
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL--- 133
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERN 405
K+ V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ N
Sbjct: 134 ---GKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188
Query: 406 SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
S+ GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 189 SFV--------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LV+D M G L YL +E+VTL+ KI+ + + L + +VHRDLK
Sbjct: 99 FFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKP 152
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF-------HTGK 431
NILLD D N +L DFG + ++ L V GT Y+APE H G
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEK------LREVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
E D++ G ++ ++ G P
Sbjct: 207 GK-EVDMWSTGVIMYTLLAGSPP 228
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 155
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV---GTAQYVSPELLTEKSACKS 212
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 75
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 129
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 185
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 75
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 129
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 185
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 72
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 73 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 126
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 182
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+A A L + ++HRD+K +NIL+ A ++ DFG+ARAI + NS + V
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ--TAAV 179
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE SDV+ G V+ EV+ G P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 319 LLLVYDFMPNGSLEKYLY-GTSEQVTLNWNHRYKILTGVASAVYYLQNEYD--QKVVHRD 375
L +V ++ G L + GT E+ L+ +++T + A+ D V+HRD
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK +N+ LD N +LGDFGLAR I N S+A+ VG P Y++PE + +
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAK-AFVGTP---YYMSPEQMNRMSYNEK 196
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ E +C P
Sbjct: 197 SDIWSLGCLLYE-LCALMP 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y ++ +VHRDLKA
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKA 141
Query: 379 SNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLDAD N ++ DFG + N+ +++ G+ Y APE F K PE
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--------GSPPYAAPELFQGKKYDGPE 193
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y ++ +VHRDLKA
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKA 141
Query: 379 SNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLDAD N ++ DFG + N+ +++ G+ Y APE F K PE
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--------GSPPYAAPELFQGKKYDGPE 193
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 31/229 (13%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG--DFLAELAIIXXXXXXXX 306
+G GGFG VY+ + D + + D S+ + E +
Sbjct: 15 IGIGGFGKVYRAF------WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG--TSEQVTLNWNHRYKILTGVASAVYYLQ 364
G C ++ L LV +F G L + L G + +NW +A + YL
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA------VQIARGMNYLH 122
Query: 365 NEYDQKVVHRDLKASNILL-----DADFN---ARLGDFGLARAIENERNSYAEHGLVGVP 416
+E ++HRDLK+SNIL+ + D + ++ DFGLAR E R + +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTK-----MSAA 175
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
G ++APE + SDV+ +G ++ E++ G P I AY
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 107 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 158
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSACKS 215
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 216 SDLWALGCIIYQLVAGLPP 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 227 MPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIK 286
+ ++ K ELK ++F LG G G+V K H + I +K IK
Sbjct: 4 LTQKAKVGELKD--DDFERISELGAGNGGVVTK-------VQHRPSGLIMARKLIHLEIK 54
Query: 287 S--KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + EL ++ G + G++ + + M GSL++ L E +
Sbjct: 55 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRI 111
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENE 403
K+ V + YL+ ++ +++HRD+K SNIL+++ +L DFG++ + I++
Sbjct: 112 PEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 169
Query: 404 RNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
NS+ GT Y+APE + +SD++ G ++E+ GR P
Sbjct: 170 ANSFV--------GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 84 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 135
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 136 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 192
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 193 SDLWALGCIIYQLVAGLPP 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 103
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 104 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 157
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 213
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 214 FRRFTSASDVWMFGVCMWEIL 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 83 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 134
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 135 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 191
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 192 SDLWALGCIIYQLVAGLPP 210
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PR + +NF +++GEG GIV + + + +AVKK
Sbjct: 146 PGDPRSY--------LDNF---IKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRK 188
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 189 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----M 244
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ L + Q V+HRD+K+ +ILL D +L DFG + E
Sbjct: 245 NEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE- 300
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE PE D++ G +V+E+V G P
Sbjct: 301 -VPRRKXLVGTP---YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y ++ +VHRDLKA
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKA 141
Query: 379 SNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLDAD N ++ DFG + N+ +++ G+ Y APE F K PE
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--------GSPPYAAPELFQGKKYDGPE 193
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 80
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 81 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 134
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESIN 190
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 191 FRRFTSASDVWMFGVCMWEIL 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 19/210 (9%)
Query: 249 LGEGGFGIVYKGIIH--HNDQYHVDNTQIAVKKFSR-DSIKSKGDFLAELAIIXXXXXXX 305
LG G FG VY+G + ND + Q+AVK S + + DFL E II
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPL---QVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGT----SEQVTLNWNHRYKILTGVASAVY 361
G + ++ + M G L+ +L T S+ +L + +A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGT 418
YL+ + +HRD+ A N LL A++GDFG+A+ I + Y + G +P
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA-SYYRKGGCAMLP-- 209
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+ ++ PE F G T ++D + FG ++ E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 78
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 79 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 132
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESIN 188
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 77
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 78 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES--- 131
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 187
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 82 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 133
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 190
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 191 SDLWALGCIIYQLVAGLPP 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PR + +NF +++GEG GIV + + + +AVKK
Sbjct: 26 PGDPRSY--------LDNF---IKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRK 68
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 69 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----M 124
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ L + Q V+HRD+K+ +ILL D +L DFG + E
Sbjct: 125 NEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 181
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE PE D++ G +V+E+V G P
Sbjct: 182 PR--RKXLVGTP---YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 103 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 154
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSACKS 211
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 212 SDLWALGCIIYQLVAGLPP 230
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 455
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 456 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES--- 509
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ A +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 565
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 81 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 132
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 133 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 189
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 190 SDLWALGCIIYQLVAGLPP 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+A A L + ++HRD+K +NI++ A ++ DFG+ARAI + NS + V
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAV 179
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE SDV+ G V+ EV+ G P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
+++GEG GIV H+ + Q+AVK + + E+ I+
Sbjct: 51 VKIGEGSTGIVCLAREKHSGR------QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
+L ++ +F+ G+L + QV LN + V A+ YL
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYL--- 157
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
+ Q V+HRD+K+ +ILL D +L DFG I ++ LVG P ++APE
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI--SKDVPKRKXLVGTP---YWMAPEV 212
Query: 427 FHTGKATPESDVFGFGAVVLEVVCGRSP 454
E D++ G +V+E+V G P
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+A A L + ++HRD+K +NI++ A ++ DFG+ARAI + NS + V
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAV 179
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE SDV+ G V+ EV+ G P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PR + +NF +++GEG GIV + + + +AVKK
Sbjct: 24 PGDPRSY--------LDNF---IKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRK 66
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 67 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----M 122
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ L + Q V+HRD+K+ +ILL D +L DFG + E
Sbjct: 123 NEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 179
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE PE D++ G +V+E+V G P
Sbjct: 180 PR--RKXLVGTP---YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 155
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 212
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 155
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 212
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAII 298
++F + LG G G+V+K H + + +K IK + + EL ++
Sbjct: 6 DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTG 355
G + G++ + + M GSL++ L EQ+ K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL------GKVSIA 112
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAEHGLVG 414
V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ NS+
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------ 164
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 165 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+A A L + ++HRD+K +NI++ A ++ DFG+ARAI + NS + V
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAV 179
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE SDV+ G V+ EV+ G P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+A A L + ++HRD+K +NI++ A ++ DFG+ARAI + NS + V
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAV 179
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE SDV+ G V+ EV+ G P
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 35 LGRGAFGQVIEA-----DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT---------LNWNHRYKI 352
G C + G L+++ +F G+L YL + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y G
Sbjct: 150 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD-YVRKGD 205
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
+P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 206 ARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 15 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 72 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 128
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + Y VP + AP
Sbjct: 129 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAP 183
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 155
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 212
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 213 SDLWALGCIIYQLVAGLPP 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 157
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 214
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PR + +NF +++GEG GIV + + + +AVKK
Sbjct: 15 PGDPRSY--------LDNF---IKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRK 57
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 58 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----M 113
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ L + Q V+HRD+K+ +ILL D +L DFG + E
Sbjct: 114 NEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE PE D++ G +V+E+V G P
Sbjct: 171 PR--RKXLVGTP---YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+A A L + ++HRD+K +NI++ A ++ DFG+ARAI + NS + V
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ--TAAV 196
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE SDV+ G V+ EV+ G P
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 88 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 139
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 140 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 196
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 197 SDLWALGCIIYQLVAGLPP 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 22/246 (8%)
Query: 214 EPHHNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVY-KGIIHHNDQYHVDN 272
+P + G L+ + K K ++F LG+G FG V+ + D H+
Sbjct: 1 QPSKDEGVLKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYA 60
Query: 273 TQIAVKKFS---RDSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNG 329
++ +KK + RD +++K E I+ +GKL L+ DF+ G
Sbjct: 61 MKV-LKKATLKVRDRVRTK----MERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGG 115
Query: 330 SLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA 389
L L S++V L +A + +L + +++RDLK NILLD + +
Sbjct: 116 DLFTRL---SKEVMFTEEDVKFYLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHI 169
Query: 390 RLGDFGLAR-AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+L DFGL++ AI++E+ +Y+ GT+ Y+APE + + +D + +G ++ E+
Sbjct: 170 KLTDFGLSKEAIDHEKKAYS------FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 449 VCGRSP 454
+ G P
Sbjct: 224 LTGSLP 229
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFDPDDNHLGLNI 74
GLAF +AP D+ P ++ +LGL F + + VA+EFDT + +DP + H+G+N+
Sbjct: 89 GLAFFLAPIDTKP--QTHAGYLGL---FNENESGDQVVAVEFDTFRNSWDPPNPHIGINV 143
Query: 75 NSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKETIN 134
NS+ S K L++ V + YD + L+ + + +L + ++
Sbjct: 144 NSIRSIKTTSWD------LANNKVAKVLITYDASTSLLVASLVYPSQRTSN--ILSDVVD 195
Query: 135 LKDYLKPESYFGFSASTG 152
LK L GFSA+TG
Sbjct: 196 LKTSLPEWVRIGFSAATG 213
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAII 298
++F + LG G G+V+K H + + +K IK + + EL ++
Sbjct: 6 DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTG 355
G + G++ + + M GSL++ L EQ+ K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL------GKVSIA 112
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAEHGLVG 414
V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ NS+
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------ 164
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 165 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 19 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 76 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 132
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + Y VP + AP
Sbjct: 133 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAP 187
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAEL---A 296
+F LG GGFG+V++ +D Y + ++ ++ +R+ + + LA+L
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR---YKIL 353
I+ + +Y M E + + T+ R I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERN-------- 405
+A AV +L + + ++HRDLK SNI D ++GDFGL A++ +
Sbjct: 125 LQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 406 -SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
+YA H G GT Y++PE H + + D+F G ++ E++
Sbjct: 182 PAYARH--TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 107 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 158
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 215
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 216 SDLWALGCIIYQLVAGLPP 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 157
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 214
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAII 298
++F + LG G G+V+K H + + +K IK + + EL ++
Sbjct: 6 DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTG 355
G + G++ + + M GSL++ L EQ+ K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL------GKVSIA 112
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAEHGLVG 414
V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ NS+
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------ 164
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 165 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 157
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 214
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAII 298
++F + LG G G+V+K H + + +K IK + + EL ++
Sbjct: 6 DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTG 355
G + G++ + + M GSL++ L EQ+ K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL------GKVSIA 112
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAEHGLVG 414
V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I++ NS+
Sbjct: 113 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------ 164
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 165 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+GEG FG V++GI + + K + DS++ K FL E +
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK--FLQEALTMRQFDHPHIVK 455
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G E + ++ + G L +L + +L+ +++A+ YL++
Sbjct: 456 LIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES--- 509
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
++ VHRD+ A N+L+ ++ +LGDFGL+R +E+ A G + + ++APE +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI----KWMAPESIN 565
Query: 429 TGKATPESDVFGFGAVVLEVV 449
+ T SDV+ FG + E++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 111 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 162
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 163 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 219
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 220 SDLWALGCIIYQLVAGLPP 238
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG VYK + A K S + D++ E+ I+
Sbjct: 18 ELGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIV 71
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
G + GKL ++ +F P G+++ + +T +I + L +
Sbjct: 72 KLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT-----EPQIQVVCRQMLEALNFLH 126
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
++++HRDLKA N+L+ + + RL DFG++ +N + +G P ++APE
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTP---YWMAPEVV 181
Query: 428 --HTGKATP---ESDVFGFGAVVLEVVCGRSP 454
T K TP ++D++ G ++E+ P
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PR + +NF +++GEG GIV + + + +AVKK
Sbjct: 19 PGDPRSY--------LDNF---IKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRK 61
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 62 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----M 117
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ L + Q V+HRD+K+ +ILL D +L DFG + E
Sbjct: 118 NEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 174
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE PE D++ G +V+E+V G P
Sbjct: 175 PR--RKXLVGTP---YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 157
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 214
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 109 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 160
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 161 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 217
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 218 SDLWALGCIIYQLVAGLPP 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y ++ +VHRDLKA
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKA 141
Query: 379 SNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLDAD N ++ DFG + N+ + + G+ Y APE F K PE
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDEFC--------GSPPYAAPELFQGKKYDGPE 193
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 319 LLLVYDFMPNGSLEKYLY-GTSEQVTLNWNHRYKILTGVASAVYYLQNEYD--QKVVHRD 375
L +V ++ G L + GT E+ L+ +++T + A+ D V+HRD
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK +N+ LD N +LGDFGLAR I N S+A+ VG P Y++PE + +
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLAR-ILNHDTSFAK-TFVGTP---YYMSPEQMNRMSYNEK 196
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ E +C P
Sbjct: 197 SDIWSLGCLLYE-LCALMP 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y ++ +VHRDLKA
Sbjct: 88 LYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKA 141
Query: 379 SNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLDAD N ++ DFG + N+ +++ G Y APE F K PE
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDAFC--------GAPPYAAPELFQGKKYDGPE 193
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG+G FG VYK + A K S + D++ E+ I+
Sbjct: 27 LGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
G + GKL ++ +F P G+++ + +T +I + L +
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT-----EPQIQVVCRQMLEALNFLHS 135
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF- 427
++++HRDLKA N+L+ + + RL DFG+ + +N + +G P ++APE
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGV--SAKNLKTLQKRDSFIGTP---YWMAPEVVM 190
Query: 428 -HTGKATP---ESDVFGFGAVVLEVVCGRSP 454
T K TP ++D++ G ++E+ P
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 15 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 72 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 128
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + Y VP + AP
Sbjct: 129 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAP 183
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 103 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 154
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSACKS 211
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 212 SDLWALGCIIYQLVAGLPP 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
KL + NG L KY+ G+ ++ + + SA+ YL + ++HRD
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRF-----YTAEIVSALEYLHG---KGIIHRD 157
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK NILL+ D + ++ DFG A+ + E + V GT YV+PE A
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV---GTAQYVSPELLTEKSAXKS 214
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ ++V G P
Sbjct: 215 SDLWALGCIIYQLVAGLPP 233
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 25 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 82 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 138
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + Y VP + AP
Sbjct: 139 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAP 193
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQI-AVKKFSRDSIKSK-GDFLA----- 293
N+F +G GGFG VY D ++ A+K + IK K G+ LA
Sbjct: 188 NDFSVHRIIGRGGFGEVYGC-------RKADTGKMYAMKCLDKKRIKMKQGETLALNERI 240
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYK 351
L+++ H KL + D M G L +L +G + + +
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY---- 296
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG 411
A + L++ +++ VV+RDLK +NILLD + R+ D GLA ++ H
Sbjct: 297 ----AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHA 348
Query: 412 LVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
V GT GY+APE G A S D F G ++ +++ G SP
Sbjct: 349 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQI-AVKKFSRDSIKSK-GDFLA----- 293
N+F +G GGFG VY D ++ A+K + IK K G+ LA
Sbjct: 189 NDFSVHRIIGRGGFGEVYGC-------RKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYK 351
L+++ H KL + D M G L +L +G + + +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY---- 297
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG 411
A + L++ +++ VV+RDLK +NILLD + R+ D GLA ++ H
Sbjct: 298 ----AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHA 349
Query: 412 LVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
V GT GY+APE G A S D F G ++ +++ G SP
Sbjct: 350 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQI-AVKKFSRDSIKSK-GDFLA----- 293
N+F +G GGFG VY D ++ A+K + IK K G+ LA
Sbjct: 189 NDFSVHRIIGRGGFGEVYGC-------RKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYK 351
L+++ H KL + D M G L +L +G + + +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY---- 297
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG 411
A + L++ +++ VV+RDLK +NILLD + R+ D GLA ++ H
Sbjct: 298 ----AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHA 349
Query: 412 LVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
V GT GY+APE G A S D F G ++ +++ G SP
Sbjct: 350 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQI-AVKKFSRDSIKSK-GDFLA----- 293
N+F +G GGFG VY D ++ A+K + IK K G+ LA
Sbjct: 189 NDFSVHRIIGRGGFGEVYGC-------RKADTGKMYAMKCLDKKRIKMKQGETLALNERI 241
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYK 351
L+++ H KL + D M G L +L +G + + +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY---- 297
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG 411
A + L++ +++ VV+RDLK +NILLD + R+ D GLA ++ H
Sbjct: 298 ----AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHA 349
Query: 412 LVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
V GT GY+APE G A S D F G ++ +++ G SP
Sbjct: 350 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 19 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 75
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 76 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 132
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + Y VP + AP
Sbjct: 133 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP--FAWCAP 187
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 26/211 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQI-AVKKFSRDSIKSKGDFLAELAIIXXXXXXXX 306
+LGEG +G VYK I H + QI A+K+ +S + + E++I+
Sbjct: 36 KLGEGSYGSVYKAI-------HKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHV 86
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
G + L +V ++ GS+ + ++ TL + IL + YL
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYL--- 141
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN---ERNSYAEHGLVGVPGTMGYVA 423
+ + +HRD+KA NILL+ + +A+L DFG+A + + +RN V GT ++A
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--------VIGTPFWMA 193
Query: 424 PECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
PE +D++ G +E+ G+ P
Sbjct: 194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 29/230 (12%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
PG PR + +NF +++GEG GIV + + + +AVKK
Sbjct: 69 PGDPRSY--------LDNF---IKIGEGSTGIVCIATVRSSGKL------VAVKKMDLRK 111
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ + E+ I+ +L +V +F+ G+L + T +
Sbjct: 112 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----M 167
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
N + V A+ L + Q V+HRD+K+ +ILL D +L DFG + E
Sbjct: 168 NEEQIAAVCLAVLQALSVL---HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE- 223
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
LVG P ++APE PE D++ G +V+E+V G P
Sbjct: 224 -VPRRKXLVGTP---YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 13 GHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG--FDPDDNHL 70
GLAF +AP S PP++ G +LGL ++ N + VA+EFDT + DP D H+
Sbjct: 88 ADGLAFFLAPVSS-PPKAGAG-FLGLFDSAV-FNSSYQTVAVEFDTYENTVFLDPPDTHI 144
Query: 71 GLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLK 130
G+++NS+ S K V L++G + V + YD +KL+ + +L
Sbjct: 145 GIDVNSIKSIKTVKWD------LANGEAAKVLITYDSSAKLLVAALVYPSSKTSF--ILS 196
Query: 131 ETINLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
+ ++LK L GFSA+TG +I+ + V SW+
Sbjct: 197 DVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSF 234
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 13 GHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG--FDPDDNHL 70
GLAF +AP S PP++ G +LGL ++ N + VA+EFDT + DP D H+
Sbjct: 88 ADGLAFFLAPVSS-PPKAGAG-FLGLFDSAV-FNSSYQTVAVEFDTYENTVFLDPPDTHI 144
Query: 71 GLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLK 130
G+++NS+ S K V L++G + V + YD +KL+ + +L
Sbjct: 145 GIDVNSIKSIKTVKWD------LANGEAAKVLITYDSSAKLLVAALVYPSSKTSF--ILS 196
Query: 131 ETINLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
+ ++LK L GFSA+TG +I+ + V SW+
Sbjct: 197 DVVDLKSVLPEWVSIGFSAATGASSGYIETHDVFSWSF 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 319 LLLVYDFMPNGSLEKYLY-GTSEQVTLNWNHRYKILTGVASAVYYLQNEYD--QKVVHRD 375
L +V ++ G L + GT E+ L+ +++T + A+ D V+HRD
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK +N+ LD N +LGDFGLAR + ++ + E VG P Y++PE + +
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTP---YYMSPEQMNRMSYNEK 196
Query: 436 SDVFGFGAVVLEVVCGRSP 454
SD++ G ++ E +C P
Sbjct: 197 SDIWSLGCLLYE-LCALMP 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIE--NERNSYAEHGLV 413
+ SAV Y ++ +VHRDLKA N+LLDAD N ++ DFG + N+ +++
Sbjct: 115 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----- 166
Query: 414 GVPGTMGYVAPECFHTGKAT-PESDVFGFGAVVLEVVCGRSP 454
G+ Y APE F K PE DV+ G ++ +V G P
Sbjct: 167 ---GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P + +E ++K +F LG+G FG V+ +Q+ A+K +D
Sbjct: 2 PELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQF------FAIKALKKDV 55
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCH------EKGKLLLVYDFMPNGSLEKYLYGT 338
+ D E ++ H K L V +++ G L Y +
Sbjct: 56 VLMDDD--VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQS 112
Query: 339 SEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLAR 398
+ L+ Y A + LQ + + +V+RDLK NILLD D + ++ DFG+ +
Sbjct: 113 CHKFDLSRATFY-----AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
EN + G P Y+APE K D + FG ++ E++ G+SP
Sbjct: 168 --ENMLGDAKTNEFCGTP---DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 35 LGRGAFGQVIEA-----DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT---------LNWNHRYKI 352
G C + G L+++ +F G+L YL + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y G
Sbjct: 150 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGD 205
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
+P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 206 ARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 21/222 (9%)
Query: 237 KKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF---LA 293
+ +NF LG+G FG V + + AVK +D I D +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLY------AVKVLKKDVILQDDDVECTMT 72
Query: 294 ELAIIXXXXXXXXXXXXGWCHEK-GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKI 352
E I+ C + +L V +F+ G L ++ + +
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFY 129
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+ SA+ +L +D+ +++RDLK N+LLD + + +L DFG+ + E N
Sbjct: 130 AAEIISALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATF 184
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
G P Y+APE P D + G ++ E++CG +P
Sbjct: 185 CGTP---DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L LV ++ G + YL +++ + SAV Y ++ +VHRDLKA
Sbjct: 88 LYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKA 141
Query: 379 SNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKAT-PE 435
N+LLDAD N ++ DFG + N+ +++ G Y APE F K PE
Sbjct: 142 ENLLLDADXNIKIADFGFSNEFTFGNKLDAFC--------GAPPYAAPELFQGKKYDGPE 193
Query: 436 SDVFGFGAVVLEVVCGRSP 454
DV+ G ++ +V G P
Sbjct: 194 VDVWSLGVILYTLVSGSLP 212
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 25/240 (10%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF--LAELAI 297
+ + + ++G+G FG V+K ++ ++A+KK ++ K L E+ I
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKI 69
Query: 298 IXXXXXXXXXXXXGWCHEK--------GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR 349
+ C K G + LV+DF + L L + TL+ R
Sbjct: 70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 128
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
++ + + +YY+ K++HRD+KA+N+L+ D +L DFGLARA +NS
Sbjct: 129 --VMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 183
Query: 410 HGLVGVPGTMGYVAPECFHTGKAT-PESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
V T+ Y PE + P D++G G ++ E + RSP +QH L+
Sbjct: 184 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPIMQGNTEQHQLALI 241
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF--LAELAI 297
+ + + ++G+G FG V+K ++ ++A+KK ++ K L E+ I
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKI 70
Query: 298 IXXXXXXXXXXXXGWCHEK--------GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR 349
+ C K G + LV+DF + L L + TL+ R
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 129
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
++ + + +YY+ + K++HRD+KA+N+L+ D +L DFGLARA +NS
Sbjct: 130 --VMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 410 HGLVGVPGTMGYVAPECFHTGKAT-PESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
V T+ Y PE + P D++G G ++ E + RSP +QH L+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPIMQGNTEQHQLALI 242
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 25/240 (10%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF--LAELAI 297
+ + + ++G+G FG V+K ++ ++A+KK ++ K L E+ I
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKI 70
Query: 298 IXXXXXXXXXXXXGWCHEK--------GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR 349
+ C K G + LV+DF + L L + TL+ R
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 129
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
++ + + +YY+ + K++HRD+KA+N+L+ D +L DFGLARA +NS
Sbjct: 130 --VMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 410 HGLVGVPGTMGYVAPECFHTGKAT-PESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
V T+ Y PE + P D++G G ++ E + RSP +QH L+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPIMQGNTEQHQLALI 242
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD---FLAELAIIXXXXXXX 305
LG+G FG +I D+ + + AVK S+ +K K D L E+ ++
Sbjct: 40 LGKGSFG----EVILCKDK--ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ +KG LV + G L + ++ +I+ V S + Y+
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYM-- 148
Query: 366 EYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ K+VHRDLK N+LL++ D N R+ DFGL+ E A + GT Y+
Sbjct: 149 -HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKKMKDKIGTAYYI 201
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGN 456
APE H G + DV+ G ++ ++ G P N
Sbjct: 202 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P + +E ++K +F LG+G FG V+ +Q+ A+K +D
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQF------FAIKALKKDV 54
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCH------EKGKLLLVYDFMPNGSLEKYLYGT 338
+ D E ++ H K L V +++ G L Y +
Sbjct: 55 VLMDDD--VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL-MYHIQS 111
Query: 339 SEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLAR 398
+ L+ Y A + LQ + + +V+RDLK NILLD D + ++ DFG+ +
Sbjct: 112 CHKFDLSRATFY-----AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
EN + G P Y+APE K D + FG ++ E++ G+SP
Sbjct: 167 --ENMLGDAKTNXFCGTP---DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAI 297
+ ++F E LG+G FG V K + +D+ A+KK R + + L+E+ +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI-RHTEEKLSTILSEVML 55
Query: 298 IXXXX-XXXXXXXXGWCH------------EKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ W +K L + ++ N +L ++ SE +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH--SENLNQ 113
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+ +++ + A+ Y+ + Q ++HRDLK NI +D N ++GDFGLA+ +
Sbjct: 114 QRDEYWRLFRQILEALSYI---HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 405 NSY---------AEHGLVGVPGTMGYVAPECFH-TGKATPESDVFGFGAVVLEVVCGRSP 454
+ + L GT YVA E TG + D++ G + E++ S
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST 230
Query: 455 G 455
G
Sbjct: 231 G 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 36 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYL---------YGTSEQVT---LNWNHR 349
G C + G L+++ +F G+L YL Y T E + L H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
VA + +L + +K +HRDL A NILL ++ DFGLAR I + +
Sbjct: 151 ICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX-VR 206
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 207 KGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 35 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YV 205
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 206 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAII 298
++F + LG G G+V+K H + + +K IK + + EL ++
Sbjct: 9 DDFEKISELGAGNGGVVFK-------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 61
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTG 355
G + G++ + + M GSL++ L EQ+ K+
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL------GKVSIA 115
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAEHGLVG 414
V + YL+ ++ K++HRD+K SNIL+++ +L DFG++ + I+ N +
Sbjct: 116 VIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------ 167
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y++PE + +SD++ G ++E+ GR P
Sbjct: 168 --GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 30/243 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD-FLAELAIIXXX-XXXXX 306
LG G FG V + + V + Q+AVK + S+ + ++EL ++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGV-SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVT-----------LNWNHRYKILT- 354
G C G + L++++ G L YL E+ + L +LT
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 355 --------GVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
VA + +L+ + VHRDL A N+L+ ++ DFGLAR I ++ N
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN- 227
Query: 407 YAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQHAY 465
Y G +P + ++APE G T +SDV+ +G ++ E+ G +P IP + Y
Sbjct: 228 YVVRGNARLP--VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY 285
Query: 466 TLV 468
L+
Sbjct: 286 KLI 288
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 230 EFKYKELKKAT-NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK 288
++K+ E + T N F + LG+GGFG V + + + K + K K
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA-----CKKLEKKRIKKRK 226
Query: 289 GDFLA--ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNW 346
G+ +A E I+ K L LV M G L+ ++Y
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---------- 276
Query: 347 NHRYKILTGVASAVYY-------LQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARA 399
H + A AV+Y L++ + +++V+RDLK NILLD + R+ D GLA
Sbjct: 277 -HMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH 335
Query: 400 IENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ + + G GT+GY+APE + T D + G ++ E++ G+SP
Sbjct: 336 VPEGQT------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 37 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y
Sbjct: 152 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YV 207
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 208 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 230 EFKYKELKKAT-NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK 288
++K+ E + T N F + LG+GGFG V + + + K + K K
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA-----CKKLEKKRIKKRK 226
Query: 289 GDFLA--ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNW 346
G+ +A E I+ K L LV M G L+ ++Y
Sbjct: 227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY---------- 276
Query: 347 NHRYKILTGVASAVYY-------LQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARA 399
H + A AV+Y L++ + +++V+RDLK NILLD + R+ D GLA
Sbjct: 277 -HMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH 335
Query: 400 IENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ + + G GT+GY+APE + T D + G ++ E++ G+SP
Sbjct: 336 VPEGQT------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD---FLAELAIIXXXXXXX 305
LG+G FG +I D+ + + AVK S+ +K K D L E+ ++
Sbjct: 34 LGKGSFG----EVILCKDK--ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ +KG LV + G L + ++ +I+ V S + Y+
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYM-- 142
Query: 366 EYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ K+VHRDLK N+LL++ D N R+ DFGL+ E A + GT Y+
Sbjct: 143 -HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKKMKDKIGTAYYI 195
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGN 456
APE H G + DV+ G ++ ++ G P N
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 26 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YV 196
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 197 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 72 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 126
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y
Sbjct: 187 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YV 242
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 243 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 242 NFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA----ELAI 297
N+ LGEG FG V YH Q K + +K D E++
Sbjct: 5 NYQIVKTLGEGSFGKVKLA-------YHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 57
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ K ++++V ++ N L Y+ ++ ++ + +
Sbjct: 58 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV---QRDKMSEQEARRFFQQII 113
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
SAV Y K+VHRDLK N+LLD N ++ DFGL+ + + + L G
Sbjct: 114 SAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD------GNFLKTSCG 164
Query: 418 TMGYVAPECFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
+ Y APE +GK A PE DV+ G ++ ++C R P
Sbjct: 165 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 26 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YV 196
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 197 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAIIXXXXXXX 305
LG+G F VY+ H ++A+K + ++ G E+ I
Sbjct: 19 LGKGSFAGVYRAESIHT------GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRY--KILTGVASAVYYL 363
+ + + LV + NG + +YL + + N + +I+TG+ YL
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM----LYL 128
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ ++HRDL SN+LL + N ++ DFGLA ++ + + L G P Y++
Sbjct: 129 ---HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTP---NYIS 180
Query: 424 PECFHTGKATPESDVFGFGAVVLEVVCGRSP--GNMIPHQQHAYTLVDWVWMLHREGHIQ 481
PE ESDV+ G + ++ GR P + + + + L D+ +
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAK 240
Query: 482 DAVDQ--------RLNINSVVD 495
D + Q RL+++SV+D
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLD 262
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 344 LNWNHRYKILTGVASAVYYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
L + R K LT A YYL Q + +V+HRDLK N+ L+ D ++GDFGL
Sbjct: 105 LELHKRRKALTE-PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 397 ARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
A +E ER + GT Y+APE + E DV+ G ++ ++ G+ P
Sbjct: 164 ATKVEYDGERKK-------TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 242 NFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA----ELAI 297
N+ LGEG FG V YH Q K + +K D E++
Sbjct: 15 NYQIVKTLGEGSFGKVKLA-------YHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 67
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ K ++++V ++ N L Y+ ++ ++ + +
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV---QRDKMSEQEARRFFQQII 123
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
SAV Y K+VHRDLK N+LLD N ++ DFGL+ + + + L G
Sbjct: 124 SAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD------GNFLKTSCG 174
Query: 418 TMGYVAPECFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
+ Y APE +GK A PE DV+ G ++ ++C R P
Sbjct: 175 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG VYK Q + A K S + D++ E+ I+
Sbjct: 44 ELGDGAFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ + L ++ +F G+++ + +T + + A+ YL +
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYL---H 152
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D K++HRDLKA NIL D + +L DFG++ +N R +G P M C
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMC- 209
Query: 428 HTGKATP---ESDVFGFGAVVLEV 448
T K P ++DV+ G ++E+
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 242 NFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA----ELAI 297
N+ LGEG FG V YH Q K + +K D E++
Sbjct: 14 NYQIVKTLGEGSFGKVKLA-------YHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 66
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ K ++++V ++ N L Y+ ++ ++ + +
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV---QRDKMSEQEARRFFQQII 122
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
SAV Y K+VHRDLK N+LLD N ++ DFGL+ + + + L G
Sbjct: 123 SAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD------GNFLKTSCG 173
Query: 418 TMGYVAPECFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
+ Y APE +GK A PE DV+ G ++ ++C R P
Sbjct: 174 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 344 LNWNHRYKILTGVASAVYYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
L + R K LT A YYL Q + +V+HRDLK N+ L+ D ++GDFGL
Sbjct: 127 LELHKRRKALTE-PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 185
Query: 397 ARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
A +E ER + GT Y+APE + E DV+ G ++ ++ G+ P
Sbjct: 186 ATKVEYDGERKKV-------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 344 LNWNHRYKILTGVASAVYYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
L + R K LT A YYL Q + +V+HRDLK N+ L+ D ++GDFGL
Sbjct: 105 LELHKRRKALTE-PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 397 ARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
A +E ER + GT Y+APE + E DV+ G ++ ++ G+ P
Sbjct: 164 ATKVEYDGERKK-------TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 27/219 (12%)
Query: 242 NFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA----ELAI 297
N+ LGEG FG V YH Q K + +K D E++
Sbjct: 9 NYQIVKTLGEGSFGKVKLA-------YHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 61
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ K ++++V ++ N L Y+ ++ ++ + +
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV---QRDKMSEQEARRFFQQII 117
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
SAV Y K+VHRDLK N+LLD N ++ DFGL+ + + + L G
Sbjct: 118 SAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD------GNFLKTSCG 168
Query: 418 TMGYVAPECFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
+ Y APE +GK A PE DV+ G ++ ++C R P
Sbjct: 169 SPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 344 LNWNHRYKILTGVASAVYYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
L + R K LT A YYL Q + +V+HRDLK N+ L+ D ++GDFGL
Sbjct: 129 LELHKRRKALTE-PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187
Query: 397 ARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
A +E ER + GT Y+APE + E DV+ G ++ ++ G+ P
Sbjct: 188 ATKVEYDGERKKV-------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 344 LNWNHRYKILTGVASAVYYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
L + R K LT A YYL Q + +V+HRDLK N+ L+ D ++GDFGL
Sbjct: 103 LELHKRRKALTE-PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 397 ARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
A +E ER + GT Y+APE + E DV+ G ++ ++ G+ P
Sbjct: 162 ATKVEYDGERKKV-------LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 30/225 (13%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 37 LGRGAFGQVIEA-----DAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-----------LNWNHRY 350
G C + G L+++ +F G+L YL + L H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEH 410
VA + +L + +K +HRDL A NILL ++ DFGLAR I + +
Sbjct: 152 XYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX-VRK 207
Query: 411 GLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 208 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 344 LNWNHRYKILTGVASAVYYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
L + R K LT A YYL Q + +V+HRDLK N+ L+ D ++GDFGL
Sbjct: 109 LELHKRRKALTE-PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 167
Query: 397 ARAIE--NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
A +E ER + GT Y+APE + E DV+ G ++ ++ G+ P
Sbjct: 168 ATKVEYDGERKK-------TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 15 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 72 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 128
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + VP + AP
Sbjct: 129 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP--FAWCAP 183
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 217 HNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIA 276
H+ +++PGM E F + R+G+G FG V+KGI + Q +A
Sbjct: 4 HSPVAVQVPGMQNNIADPE-----ELFTKLERIGKGSFGEVFKGIDNRTQQV------VA 52
Query: 277 VKKFSRDSIKSKGDFLA-ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGS-LEKY 334
+K + + + + + E+ ++ G + KL ++ +++ GS L+
Sbjct: 53 IKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL 112
Query: 335 LYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDF 394
G ++ ++I T + + L + +K +HRD+KA+N+LL + +L DF
Sbjct: 113 RAGPFDE--------FQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADF 164
Query: 395 GLARAIEN---ERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
G+A + + +RN++ GT ++APE ++D++ G +E+ G
Sbjct: 165 GVAGQLTDTQIKRNTFV--------GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
Query: 452 RSPGN 456
P +
Sbjct: 217 EPPNS 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE--------YDQ 369
+L L+ F GSL YL G + WN + ++ + YL + +
Sbjct: 87 ELWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKP 142
Query: 370 KVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHT 429
+ HRD K+ N+LL +D A L DFGLA E + HG V GT Y+APE
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPEVLEG 199
Query: 430 G-----KATPESDVFGFGAVVLEVV 449
A D++ G V+ E+V
Sbjct: 200 AINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD---FLAELAIIXXXXXXX 305
LG+G FG V I D+ + + AVK S+ +K K D L E+ ++
Sbjct: 57 LGKGSFGEV----ILCKDK--ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ +KG LV + G L + ++ +I+ V S + Y+
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYM-- 165
Query: 366 EYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ K+VHRDLK N+LL++ D N R+ DFGL+ E A + GT Y+
Sbjct: 166 -HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKKMKDKIGTAYYI 218
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGN 456
APE H G + DV+ G ++ ++ G P N
Sbjct: 219 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K L LV M G + ++Y E R T A V L++ + + +++RD
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHLHQRNIIYRD 314
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD D N R+ D GL A+E + G G P G++APE +
Sbjct: 315 LKPENVLLDDDGNVRISDLGL--AVELKAGQTKTKGYAGTP---GFMAPELLLGEEYDFS 369
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D F G + E++ R P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL +E + VV+RDLK
Sbjct: 225 RLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 279
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E ++ G P Y+APE D
Sbjct: 280 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTP---EYLAPEVLEDNDYGRAVD 334
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 335 WWGLGVVMYEMMCGRLP 351
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K L LV M G + ++Y E R T A V L++ + + +++RD
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHLHQRNIIYRD 314
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD D N R+ D GL A+E + G G P G++APE +
Sbjct: 315 LKPENVLLDDDGNVRISDLGL--AVELKAGQTKTKGYAGTP---GFMAPELLLGEEYDFS 369
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D F G + E++ R P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL +E + VV+RDLK
Sbjct: 222 RLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 276
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E ++ G P Y+APE D
Sbjct: 277 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTP---EYLAPEVLEDNDYGRAVD 331
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 332 WWGLGVVMYEMMCGRLP 348
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K L LV M G + ++Y E R T A V L++ + + +++RD
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHLHQRNIIYRD 314
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD D N R+ D GL A+E + G G P G++APE +
Sbjct: 315 LKPENVLLDDDGNVRISDLGL--AVELKAGQTKTKGYAGTP---GFMAPELLLGEEYDFS 369
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D F G + E++ R P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG VYK Q + A K S + D++ E+ I+
Sbjct: 44 ELGDGAFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ + L ++ +F G+++ + +T + + A+ YL +
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYL---H 152
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D K++HRDLKA NIL D + +L DFG++ +N R +G P M C
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMC- 209
Query: 428 HTGKATP---ESDVFGFGAVVLEV 448
T K P ++DV+ G ++E+
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 20/223 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAIIXXXXXX 304
+LG+G FG+V +G D +AVK D + ++ DF+ E+ +
Sbjct: 25 KLGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQ 364
G + +V + P GSL L L RY + VA + YL+
Sbjct: 82 NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLE 138
Query: 365 NEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+ ++ +HRDL A N+LL ++GDFGL RA+ + VP + AP
Sbjct: 139 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP--FAWCAP 193
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVC-GRSP-----GNMIPHQ 461
E T + SD + FG + E+ G+ P G+ I H+
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD---FLAELAIIXXXXXXX 305
LG+G FG V I D+ + + AVK S+ +K K D L E+ ++
Sbjct: 58 LGKGSFGEV----ILCKDK--ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ +KG LV + G L + ++ +I+ V S + Y+
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYM-- 166
Query: 366 EYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ K+VHRDLK N+LL++ D N R+ DFGL+ E A + GT Y+
Sbjct: 167 -HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKKMKDKIGTAYYI 219
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGN 456
APE H G + DV+ G ++ ++ G P N
Sbjct: 220 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA-ELAIIXXXXXXXX 306
R+G+G FG VYKGI +H + +A+K + + + + + E+ ++
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEV------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGS-LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
G + KL ++ +++ GS L+ G E+ + IL + + YL +
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHS 134
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN---ERNSYAEHGLVGVPGTMGYV 422
E + +HRD+KA+N+LL + +L DFG+A + + +RN + GT ++
Sbjct: 135 E---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV--------GTPFWM 183
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGN 456
APE ++D++ G +E+ G P +
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPPNS 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 25/240 (10%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF--LAELAI 297
+ + + ++G+G FG V+K ++ ++A+KK ++ K L E+ I
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKI 70
Query: 298 IXXXXXXXXXXXXGWCHEKGK--------LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR 349
+ C K + LV+DF + L L + TL+ R
Sbjct: 71 LQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 129
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
++ + + +YY+ + K++HRD+KA+N+L+ D +L DFGLARA +NS
Sbjct: 130 --VMQMLLNGLYYI---HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 410 HGLVGVPGTMGYVAPECFHTGKAT-PESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
V T+ Y PE + P D++G G ++ E + RSP +QH L+
Sbjct: 185 RYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPIMQGNTEQHQLALI 242
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K L LV M G + ++Y E R T A V L++ + + +++RD
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYT--AQIVSGLEHLHQRNIIYRD 314
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD D N R+ D GL A+E + G G P G++APE +
Sbjct: 315 LKPENVLLDDDGNVRISDLGL--AVELKAGQTKTKGYAGTP---GFMAPELLLGEEYDFS 369
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D F G + E++ R P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 27/223 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIK-SKGDFLAELAIIXXXXXXXX 306
+LGEG + VYKG + + + +A+K+ + + + + E++++
Sbjct: 9 KLGEGTYATVYKG------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR---YKILTGVASAVYYL 363
H + L LV++++ + L++YL + ++ N + +++L G+A
Sbjct: 63 VTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFLFQLLRGLAYC---- 116
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ QKV+HRDLK N+L++ +L DFGLARA +Y + T+ Y
Sbjct: 117 ---HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-----TLWYRP 168
Query: 424 PE-CFHTGKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQQH 463
P+ + + + D++G G + E+ GR PG+ + Q H
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 12 SGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKA-NHFVAIEFDT--VKQGFDPDDN 68
+ GLAF +AP DS YG +LGL T + + N VA+EFDT K DP
Sbjct: 87 TADGLAFFLAPVDS--SVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYP 144
Query: 69 HLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPL 128
H+G+++NS+VS +++ S T++ + YD +SK++ V + E + +
Sbjct: 145 HIGIDVNSIVSVATTRWENDDAYGSSIATAH---ITYDARSKILTVLLSYE---HGRDYI 198
Query: 129 LKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSW 164
L ++L L + GFSA GY ++ + SW
Sbjct: 199 LSHVVDLAKVLPQKVRIGFSAGVGYD--EVTYILSW 232
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL +E + VV+RDLK
Sbjct: 84 RLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 138
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E ++ G P Y+APE D
Sbjct: 139 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 193
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 194 WWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL +E + VV+RDLK
Sbjct: 82 RLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 136
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E ++ G P Y+APE D
Sbjct: 137 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 191
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 192 WWGLGVVMYEMMCGRLP 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 35 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + +
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX-V 205
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 206 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG+G FG VYK Q + A K S + D++ E+ I+
Sbjct: 44 ELGDGAFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 97
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ + L ++ +F G+++ + +T + + A+ YL +
Sbjct: 98 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT--ESQIQVVCKQTLDALNYL---H 152
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
D K++HRDLKA NIL D + +L DFG++ +N R +G P M C
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMC- 209
Query: 428 HTGKATP---ESDVFGFGAVVLEV 448
T K P ++DV+ G ++E+
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL +E + VV+RDLK
Sbjct: 83 RLCFVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHSE--KNVVYRDLK 137
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E ++ G P Y+APE D
Sbjct: 138 LENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 192
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 193 WWGLGVVMYEMMCGRLP 209
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIX 299
NN LG G FG V + + ++AVK S K ++EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDA-VLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 300 XX-XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQV-----------TLNWN 347
G C G +L++ ++ G L +L S + TL+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 348 HRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSY 407
+ VA + +L + + +HRD+ A N+LL A++GDFGLAR I N+ N Y
Sbjct: 165 DLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-Y 220
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
G +P + ++APE T +SDV+ +G ++ E+
Sbjct: 221 IVKGNARLP--VKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 23/219 (10%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG--DFLAELAIIXXXXXXXX 306
LG+G FG V + + D V ++AVK D I S +FL E A +
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFV---KVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87
Query: 307 XXXXG---WCHEKGKL---LLVYDFMPNGSLEKYLYGT---SEQVTLNWNHRYKILTGVA 357
G KG+L +++ FM +G L +L + L + + +A
Sbjct: 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVG-VP 416
+ YL + + +HRDL A N +L D + DFGL+R I + Y G +P
Sbjct: 148 CGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS--GDYYRQGCASKLP 202
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
+ ++A E T SDV+ FG + E++ G++P
Sbjct: 203 --VKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVP 416
V YL N +V+HRDLK N+ L+ D + ++GDFGLA IE ER +
Sbjct: 138 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK-------DLC 187
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y+APE + E D++ G ++ ++ G+ P
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKAN-HFVAIEFDTV-KQGFDPDDNHLGL 72
GLAF + P S P + G +LGL DG+ +N H VA+EFDT+ + +DP + H+G+
Sbjct: 87 GLAFALVPVGSQPKDK--GGFLGLF----DGSNSNFHTVAVEFDTLYNKDWDPTERHIGI 140
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKET 132
++NS+ S K +G + V + YD + L+ + + ++ +T
Sbjct: 141 DVNSIRSIKTTRWD------FVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDT 192
Query: 133 INLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
++LK L GFSA+TG +++ N V SW+
Sbjct: 193 VDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 26 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + +
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX-V 196
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 197 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
++G+G G VY + Q ++A+++ + K + E+ ++
Sbjct: 27 KIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+L +V +++ GSL ++ VT +I + L+ +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+V+HRD+K+ NILL D + +L DFG I E++ +E +VG P ++APE
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSE--MVGTP---YWMAPEVV 188
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSP 454
P+ D++ G + +E++ G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 26 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + +
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX-V 196
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 197 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKAN-HFVAIEFDTV-KQGFDPDDNHLGL 72
GLAF + P S P + G +LGL DG+ +N H VA+EFDT+ + +DP + H+G+
Sbjct: 87 GLAFALVPVGSQPKDK--GGFLGLF----DGSNSNFHTVAVEFDTLYNKDWDPTERHIGI 140
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKET 132
++NS+ S K +G + V + YD + L+ + + ++ +T
Sbjct: 141 DVNSIRSIKTTRWD------FVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDT 192
Query: 133 INLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
++LK L GFSA+TG +++ N V SW+
Sbjct: 193 VDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSF 228
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVP 416
V YL N +V+HRDLK N+ L+ D + ++GDFGLA IE ER +
Sbjct: 154 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK-------DLC 203
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y+APE + E D++ G ++ ++ G+ P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVP 416
V YL N +V+HRDLK N+ L+ D + ++GDFGLA IE ER L G P
Sbjct: 154 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK----TLCGTP 206
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
Y+APE + E D++ G ++ ++ G+ P
Sbjct: 207 ---NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIX 299
NN LG G FG V + + ++AVK S K ++EL I+
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDA-VLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 300 XX-XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQ-------VTLNWNHRYK 351
G C G +L++ ++ G L +L +E L
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG 411
+ VA + +L + + +HRD+ A N+LL A++GDFGLAR I N+ N Y G
Sbjct: 157 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-YIVKG 212
Query: 412 LVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+P + ++APE T +SDV+ +G ++ E+
Sbjct: 213 NARLP--VKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIE--NERNSYAEHGLVGVP 416
V YL N +V+HRDLK N+ L+ D + ++GDFGLA IE ER +
Sbjct: 154 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX-------LC 203
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y+APE + E D++ G ++ ++ G+ P
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 28/222 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY N ++ +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKNSKF-----ILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + +KV+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ GT+ Y+ PE + D++ G + E + G+ P
Sbjct: 165 -ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQ----IAVKKFSRDSIKSK-GDFLAELAI-IXXXX 302
LG G FG V + D + +D T +AVK + S+ ++EL I I
Sbjct: 35 LGRGAFGQVIEA-----DAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 303 XXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVT-------------LNWNH 348
G C + G L+++ +F G+L YL + L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
VA + +L + +K +HRDL A NILL ++ DFGLAR I + +
Sbjct: 150 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX-V 205
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
G +P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 206 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIX 299
NN LG G FG V + + ++AVK S K ++EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDA-VLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 300 XX-XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQ-------VTLNWNHRYK 351
G C G +L++ ++ G L +L +E L
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG 411
+ VA + +L + + +HRD+ A N+LL A++GDFGLAR I N+ N Y G
Sbjct: 165 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-YIVKG 220
Query: 412 LVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
+P + ++APE T +SDV+ +G ++ E+
Sbjct: 221 NARLP--VKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 3 RDPRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV--- 59
+ P P DI+ GLAF +AP DS P S ++LGL N ++ + +N VA+EFDT
Sbjct: 78 KAPNP--DITSDGLAFYLAPPDSQIPSGSVSKYLGLFNN-SNSDSSNQIVAVEFDTYFAH 134
Query: 60 -KQGFDPDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDR 118
+DP+ H+G+++N + S K V ++ G ++ LI +
Sbjct: 135 SYDPWDPNYRHIGIDVNGIESIKTVQWD-----WINGGVAFATITYLAPNKTLIASLVYP 189
Query: 119 EGETMPQKPLLKETINLKDYLKPESYFGFSASTGYP-HIQLNCVRSWTL 166
+T + +++LK+ L GFSA+TGYP ++ + V SW+
Sbjct: 190 SNQTTFS---VAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSF 235
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 22/211 (10%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKK--FSRDSIKSKGDFLAELAIIXXXXXXXX 306
+G+G FG V I+ ND + + K+ R+ ++ + EL I+
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVR---NVFKELQIMQGLEHPFL 77
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
++ + +V D + G L Y + V + + A+ YLQN
Sbjct: 78 VNLWYSFQDEEDMFMVVDLLLGGDLR---YHLQQNVHFKEETVKLFICELVMALDYLQN- 133
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
Q+++HRD+K NILLD + + DF +A + E + + GT Y+APE
Sbjct: 134 --QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ------ITTMAGTKPYMAPEM 185
Query: 427 FHTGKATPES---DVFGFGAVVLEVVCGRSP 454
F + K S D + G E++ GR P
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI---KSKGDFLAELAI 297
++FH +G+G FG V ++ + AVK + +I K + ++E +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLA------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV 91
Query: 298 IXXXXXXXXXXXXGWCHEKG-KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGV 356
+ + + KL V D++ G L + + E+ L R+ +
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARF-YAAEI 148
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP 416
ASA+ YL + +V+RDLK NILLD+ + L DFGL + EN ++ G P
Sbjct: 149 ASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTP 203
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
Y+APE H D + GAV+ E++ G P
Sbjct: 204 ---EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKA--NHFVAIEFDTV-KQGFDPDDNHLG 71
GLAF + P S P + G +LGL F N A N VA+EFDT G+DP + H+G
Sbjct: 109 GLAFALVPVGSQPKDK--GGFLGL---FDSKNYASSNQTVAVEFDTFYNGGWDPTERHIG 163
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKE 131
+++NS+ S K ++G + V + YD + L+ + + ++ E
Sbjct: 164 IDVNSIKSIKTTSWD------FANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSE 215
Query: 132 TINLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTLDIDVIQTKKEKDWK 180
++L L GFSA+TG +++ N V SW+ + K++++ K
Sbjct: 216 RVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLSWSFASKLSINKEDEENK 266
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAI 297
+ ++F E LG+G FG V K + +D+ A+KK R + + L+E+ +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI-RHTEEKLSTILSEVXL 55
Query: 298 IXXXX-XXXXXXXXGWCH------------EKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
+ W +K L + ++ N +L ++ SE +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH--SENLNQ 113
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER 404
+ +++ + A+ Y+ + Q ++HR+LK NI +D N ++GDFGLA+ +
Sbjct: 114 QRDEYWRLFRQILEALSYI---HSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 405 NSY---------AEHGLVGVPGTMGYVAPECFH-TGKATPESDVFGFGAVVLEVVCGRSP 454
+ + L GT YVA E TG + D + G + E + S
Sbjct: 171 DILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST 230
Query: 455 G 455
G
Sbjct: 231 G 231
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G + K L S EQ T +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ 118
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 119 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 169
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 170 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIX 299
NN LG G FG V + + ++AVK S K ++EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDA-VLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 300 XX-XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVAS 358
G C G +L++ ++ G L +L S L + + I AS
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR--VLETDPAFAIANSTAS 162
Query: 359 A--VYYLQNEYDQ--------KVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
+ + ++ Q +HRD+ A N+LL A++GDFGLAR I N+ N Y
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-YI 221
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
G +P + ++APE T +SDV+ +G ++ E+
Sbjct: 222 VKGNARLP--VKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD---FLAELAIIXXXXXXX 305
LG+G FG V I D+ + + AVK S+ +K K D L E+ ++
Sbjct: 34 LGKGSFGEV----ILCKDK--ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ +KG LV + G L + ++ +I+ V S + Y
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITY--- 141
Query: 366 EYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ K+VHRDLK N+LL++ D N R+ DFGL+ E + + GT Y+
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK------IGTAYYI 195
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGN 456
APE H G + DV+ G ++ ++ G P N
Sbjct: 196 APEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 54/299 (18%)
Query: 242 NFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXX 301
+F E +G GGFG V+K ++ +D +K+ ++ K++ + A +
Sbjct: 12 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVN 65
Query: 302 XXXXXXXXXGWCHE-----------KGKLLLV-YDFMPNGSLEKYLYGTSEQVTLNWNHR 349
G+ ++ K K L + +F G+LE+++ + L+
Sbjct: 66 IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLA 124
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
++ + V Y+ + +K+++RDLK SNI L ++GDFGL +++N+
Sbjct: 125 LELFEQITKGVDYI---HSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS 181
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV--VCGRSPGNMIPHQQHAYTL 467
GT+ Y++PE + E D++ G ++ E+ VC A+
Sbjct: 182 ------KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC-----------DTAFET 224
Query: 468 VDWVWMLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQIIS 526
+ L R+G I D + D+ ++ LL L P +RP T +IL+ ++
Sbjct: 225 SKFFTDL-RDGIISD----------IFDKKEKTLLQKLLSKKP--EDRPNTSEILRTLT 270
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERN------ 405
I +A AV +L + + ++HRDLK SNI D ++GDFGL A++ +
Sbjct: 169 IFIQIAEAVEFL---HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 406 ---SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
+YA H G GT Y++PE H + + D+F G ++ E++
Sbjct: 226 PMPAYATH--XGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA-ELAIIXXX 301
F + ++G+G FG V+KGI + + +A+K + + + + + E+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 302 XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
G + KL ++ +++ GS L E L+ IL + +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLD 118
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN---ERNSYAEHGLVGVPGT 418
YL +E K +HRD+KA+N+LL +L DFG+A + + +RN++ GT
Sbjct: 119 YLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--------GT 167
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
++APE ++D++ G +E+ G P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 121/302 (40%), Gaps = 48/302 (15%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G + K L S EQ T +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------ 118
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 119 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX------ 169
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVW 472
+ GT+ Y+ PE + D++ G + E + G+ P +Q+ Y + V
Sbjct: 170 -XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRV- 226
Query: 473 MLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQI--ISGTST 530
V E R L+ L +P S+RP ++L+ I+ S+
Sbjct: 227 --------------EFTFPDFVTEGARDLISRLLKHNP--SQRPMLREVLEHPWITANSS 270
Query: 531 VP 532
P
Sbjct: 271 KP 272
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA-ELAIIXXX 301
F + ++G+G FG V+KGI + + +A+K + + + + + E+ ++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQC 82
Query: 302 XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
G + KL ++ +++ GS L E L+ IL + +
Sbjct: 83 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLD 138
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN---ERNSYAEHGLVGVPGT 418
YL +E K +HRD+KA+N+LL +L DFG+A + + +RN++ GT
Sbjct: 139 YLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV--------GT 187
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
++APE ++D++ G +E+ G P
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA-ELAIIXXX 301
F + ++G+G FG V+KGI + + +A+K + + + + + E+ ++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 302 XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
G + KL ++ +++ GS L E L+ IL + +
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLD 133
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN---ERNSYAEHGLVGVPGT 418
YL +E K +HRD+KA+N+LL +L DFG+A + + +RN + GT
Sbjct: 134 YLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--------GT 182
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
++APE ++D++ G +E+ G P
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 13 GHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKA-NHFVAIEFDT-VKQGF-DPDDNH 69
GLAF +AP DS ++ G++LGL N T + N VA+EFDT F +P H
Sbjct: 87 ADGLAFFLAPPDSDVKDA--GEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRH 144
Query: 70 LGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDR-EGETMPQKPL 128
+G+N+NS+VS +D+ + G T + YDG ++++ V + +G +
Sbjct: 145 IGINVNSIVSVATKRWEDS---DIFSGKIATARISYDGSAEILTVVLSYPDGSDY----I 197
Query: 129 LKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSW 164
L +++++ L G SASTG + SW
Sbjct: 198 LSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSW 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L + +F G+LE+++ + L+ ++ + V Y+ + +K++HRDLK
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITKGVDYI---HSKKLIHRDLKP 164
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDV 438
SNI L ++GDFGL +++N+ GT+ Y++PE + E D+
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKR------TRSKGTLRYMSPEQISSQDYGKEVDL 218
Query: 439 FGFGAVVLEV--VCGRSPGNMIPHQQHAYTLVDWVWMLHREGHIQDAVDQRLNINSVVDE 496
+ G ++ E+ VC A+ + L R+G I D + D+
Sbjct: 219 YALGLILAELLHVC-----------DTAFETSKFFTDL-RDGIISD----------IFDK 256
Query: 497 AKRLLLLGLACSHPIASERPKTEDILQIIS 526
++ LL L P +RP T +IL+ ++
Sbjct: 257 KEKTLLQKLLSKKP--EDRPNTSEILRTLT 284
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 13 GHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKA-NHFVAIEFDT-VKQGF-DPDDNH 69
GLAF +AP DS ++ G++LGL N T + N VA+EFDT F +P H
Sbjct: 87 ADGLAFFLAPPDSDVKDA--GEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRH 144
Query: 70 LGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDR-EGETMPQKPL 128
+G+N+NS+VS +D+ + G T + YDG ++++ V + +G +
Sbjct: 145 IGINVNSIVSVATKRWEDS---DIFSGKIATARISYDGSAEILTVVLSYPDGSDY----I 197
Query: 129 LKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSW 164
L +++++ L G SASTG + SW
Sbjct: 198 LSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSW 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 48/308 (15%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 115 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT------ 165
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVW 472
+ GT+ Y+ PE + D++ G + E + G+ P +Q+ Y + V
Sbjct: 166 -TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRV- 222
Query: 473 MLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQ--IISGTST 530
V E R L+ L +P S+RP ++L+ I+ S+
Sbjct: 223 --------------EFTFPDFVTEGARDLISRLLKHNP--SQRPMLREVLEHPWITANSS 266
Query: 531 VPYVPQFK 538
P Q K
Sbjct: 267 KPSNSQNK 274
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 237 KKATNNFHESMRLGEGGFGIVYKGIIHHNDQYH---VDNTQIAVKKFSRDSIKSKGDFLA 293
K + +F LG G FG V+ HN +Y+ V +I V+ ++ D
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR---LKQVEHTNDERL 58
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKIL 353
L+I+ G + ++ ++ D++ G L L Q N ++
Sbjct: 59 MLSIVTHPFIIRMW---GTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKF-YA 112
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
V A+ YL + + +++RDLK NILLD + + ++ DFG A+ + + + L
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
G P Y+APE T D + FG ++ E++ G +P
Sbjct: 165 GTP---DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + + +A+K + ++ G E+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREV 85
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 139
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 140 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 190
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 191 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 239
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 58
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 59 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 112
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 113 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 163
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 164 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 117 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA------ 167
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 168 -ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA---ELAIIXXXXXXX 305
LGEG FG V K H+ Q ++A+K SR +K + E++ +
Sbjct: 17 LGEGSFGKV-KLATHYKTQ-----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+++V ++ G L Y+ E+ + + + + A+ Y
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIV---EKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
K+VHRDLK N+LLD + N ++ DFGL+ + + + L G+ Y APE
Sbjct: 127 ---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD------GNFLKTSCGSPNYAAPE 177
Query: 426 CFHTGK--ATPESDVFGFGAVVLEVVCGRSP 454
+ GK A PE DV+ G V+ ++ GR P
Sbjct: 178 VIN-GKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + + + +A+K + ++ G E+
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY--LAREKQRKFI----LALKVLFKAQLEKAGVEHQLRREV 56
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 57 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 110
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 111 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 161
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 162 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 117 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 167
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 168 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLA-ELAIIXXX 301
F + ++G+G FG V+KGI + + +A+K + + + + + E+ ++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKV------VAIKIIDLEEAEDEIEDIQQEITVLSQC 62
Query: 302 XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
G + KL ++ +++ GS L E L+ IL + +
Sbjct: 63 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLD 118
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIEN---ERNSYAEHGLVGVPGT 418
YL +E K +HRD+KA+N+LL +L DFG+A + + +RN + GT
Sbjct: 119 YLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV--------GT 167
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
++APE ++D++ G +E+ G P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 119 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 169
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 170 -DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 117 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 167
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 168 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 115 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 165
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 166 -DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 48/302 (15%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 119 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 169
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVW 472
+ GT+ Y+ PE + D++ G + E + G+ P +Q+ Y + V
Sbjct: 170 -TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRV- 226
Query: 473 MLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQI--ISGTST 530
V E R L+ L +P S+RP ++L+ I+ S+
Sbjct: 227 --------------EFTFPDFVTEGARDLISRLLKHNP--SQRPXLREVLEHPWITANSS 270
Query: 531 VP 532
P
Sbjct: 271 KP 272
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 33/223 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAIIXXXXXXX 305
LG+G FG VY + +A+K + ++ G E+ I
Sbjct: 20 LGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTGVASAVYY 362
G+ H+ ++ L+ ++ P G++ + L S EQ T + +T +A+A+ Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALSY 127
Query: 363 LQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ ++V+HRD+K N+LL ++ ++ DFG + + R + + GT+ Y+
Sbjct: 128 C---HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT-------TLCGTLDYL 177
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
PE + D++ G + E + G M P + H Y
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-----MPPFEAHTY 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
K+ +V ++ P G L Y+ Q L+ + + SAV Y+ + Q HRDLK
Sbjct: 82 KIFMVLEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLK 135
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKAT--PE 435
N+L D +L DFGL + ++ + L G++ Y APE GK+ E
Sbjct: 136 PENLLFDEYHKLKLIDFGLCAKPKGNKD----YHLQTCCGSLAYAAPELIQ-GKSYLGSE 190
Query: 436 SDVFGFGAVVLEVVCGRSP 454
+DV+ G ++ ++CG P
Sbjct: 191 ADVWSMGILLYVLMCGFLP 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + + +A+K + ++ G E+
Sbjct: 23 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREV 76
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 77 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 130
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 131 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 181
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 182 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 118
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 119 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 169
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 170 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 218
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 63
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 64 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 117
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 118 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 168
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 169 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 48/302 (15%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + + +A+K + ++ G E+
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY--LAREKQSKFI----LALKVLFKAQLEKAGVEHQLRREV 85
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 139
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 140 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD------ 190
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVW 472
+ GT+ Y+ PE + D++ G + E + G+ P +Q+ Y + V
Sbjct: 191 -DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRV- 247
Query: 473 MLHREGHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQI--ISGTST 530
V E R L+ L +P S+RP ++L+ I+ S+
Sbjct: 248 --------------EFTFPDFVTEGARDLISRLLKHNP--SQRPMLREVLEHPWITANSS 291
Query: 531 VP 532
P
Sbjct: 292 KP 293
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R +
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL + + VV+RD+K
Sbjct: 84 RLCFVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 137
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E + G P Y+APE D
Sbjct: 138 LENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 192
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 193 WWGLGVVMYEMMCGRLP 209
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL + + VV+RD+K
Sbjct: 79 RLCFVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 132
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E + G P Y+APE D
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 187
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 188 WWGLGVVMYEMMCGRLP 204
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
++G+G G VY + Q ++A+++ + K + E+ ++
Sbjct: 27 KIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+L +V +++ GSL ++ VT +I + L+ +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+V+HRD+K+ NILL D + +L DFG I E++ + +VG P ++APE
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--TMVGTP---YWMAPEVV 188
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSP 454
P+ D++ G + +E++ G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
++G+G G VY + Q ++A+++ + K + E+ ++
Sbjct: 27 KIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 80
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+L +V +++ GSL ++ VT +I + L+ +
Sbjct: 81 NYLDSYLVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+V+HRD+K+ NILL D + +L DFG I E++ + +VG P ++APE
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTP---YWMAPEVV 188
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSP 454
P+ D++ G + +E++ G P
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 40/239 (16%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF------SRDSIKSKGDFLAELAIIXXX 301
+LG+G +GIV+K I + +AVKK S D+ ++ + + L +
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEV------VAVKKIFDAFQNSTDAQRTFREIMI-LTELSGH 68
Query: 302 XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
+ LV+D+M E L+ L H+ ++ + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENER----------NSYAEHG 411
YL + ++HRD+K SNILL+A+ + ++ DFGL+R+ N R N E+
Sbjct: 124 YL---HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 412 ------LVGVPGTMGYVAPEC-FHTGKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQ 461
L T Y APE + K T D++ G ++ E++CG+ PG+ +Q
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL + + VV+RD+K
Sbjct: 79 RLCFVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 132
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E + G P Y+APE D
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTP---EYLAPEVLEDNDYGRAVD 187
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 188 WWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 237 KKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF---LA 293
K N+F LG+G FG V +Y+ A+K ++ I +K + +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYY------AMKILRKEVIIAKDEVAHTVT 54
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKIL 353
E ++ +L V ++ G L + + + E+V R+
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF-YG 111
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
+ SA+ YL + + VV+RD+K N++LD D + ++ DFGL + E +
Sbjct: 112 AEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFC 166
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
G P Y+APE D +G G V+ E++CGR P
Sbjct: 167 GTP---EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
++G+G G VY + Q ++A+++ + K + E+ ++
Sbjct: 28 KIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+L +V +++ GSL ++ VT +I + L+ +
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+V+HRD+K+ NILL D + +L DFG I E++ + +VG P ++APE
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX--MVGTP---YWMAPEVV 189
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSP 454
P+ D++ G + +E++ G P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL + + VV+RD+K
Sbjct: 79 RLCFVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 132
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E + G P Y+APE D
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 187
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 188 WWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL + + VV+RD+K
Sbjct: 82 RLCFVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 135
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E + G P Y+APE D
Sbjct: 136 LENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTP---EYLAPEVLEDNDYGRAVD 190
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 191 WWGLGVVMYEMMCGRLP 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
+L V ++ G L + + + E+V R+ + SA+ YL + + VV+RD+K
Sbjct: 79 RLCFVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHS---RDVVYRDIK 132
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
N++LD D + ++ DFGL + E + G P Y+APE D
Sbjct: 133 LENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTP---EYLAPEVLEDNDYGRAVD 187
Query: 438 VFGFGAVVLEVVCGRSP 454
+G G V+ E++CGR P
Sbjct: 188 WWGLGVVMYEMMCGRLP 204
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAIIXXXXXXX 305
LG+G FG VY + +A+K + ++ G E+ I
Sbjct: 20 LGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKILTGVASAVYY 362
G+ H+ ++ L+ ++ P G++ + L S EQ T + +T +A+A+ Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------ITELANALSY 127
Query: 363 LQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ ++V+HRD+K N+LL ++ ++ DFG + + R + GT+ Y+
Sbjct: 128 C---HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD-------TLCGTLDYL 177
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
PE + D++ G + E + G M P + H Y
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-----MPPFEAHTY 215
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 117 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD------ 167
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 168 -DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 60 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 113
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 114 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX------ 164
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 165 -XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 213
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 116 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX------ 166
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 167 -XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + +A+K + ++ G E+
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 114
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 115 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD------ 165
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 166 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ DFG + + R
Sbjct: 117 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRX------ 167
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 168 -XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSIKSKGDFLAELAIIX 299
NN LG G FG V + + ++AVK S K ++EL I+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAV-LKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 300 XX-XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL-----------YGTSEQVTLNWN 347
G C G +L++ ++ G L +L Y S +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 348 HR--YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERN 405
R + VA + +L + + +HRD+ A N+LL A++GDFGLAR I N+ N
Sbjct: 165 SRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
Query: 406 SYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEV 448
Y G +P + ++APE T +SDV+ +G ++ E+
Sbjct: 222 -YIVKGNARLP--VKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 30/244 (12%)
Query: 228 PREFKYKE-LKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF-SRDSI 285
P + Y E + NN LG G FG V + + ++AVK S
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDA-VLKVAVKMLKSTAHA 75
Query: 286 KSKGDFLAELAIIXXXXX-XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVT- 343
K ++EL I+ G C G +L++ ++ G L +L +E +
Sbjct: 76 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 344 -------------------LNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLD 384
L + VA + +L + + +HRD+ A N+LL
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT 192
Query: 385 ADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAV 444
A++GDFGLAR I N+ N Y G +P + ++APE T +SDV+ +G +
Sbjct: 193 NGHVAKIGDFGLARDIMNDSN-YIVKGNARLP--VKWMAPESIFDCVYTVQSDVWSYGIL 249
Query: 445 VLEV 448
+ E+
Sbjct: 250 LWEI 253
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 22/236 (9%)
Query: 237 KKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLA 293
K ++F LG+G FG VY N +A+K + ++ +G
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQN------KFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKIL 353
E+ I + H++ ++ L+ +F P G L K L + + +
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFM 120
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
+A A++Y +++KV+HRD+K N+L+ ++ DFG + + R
Sbjct: 121 EELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------- 170
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVD 469
+ GT+ Y+ PE + D++ G + E + G P + H + +V+
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE-------YDQKV 371
L L+ F GSL +L ++WN I +A + YL + + +
Sbjct: 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 372 VHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG- 430
HRD+K+ N+LL + A + DFGLA E +++ HG V GT Y+APE
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV---GTRRYMAPEVLEGAI 209
Query: 431 ----KATPESDVFGFGAVVLEVV--CGRSPG----NMIPHQQ 462
A D++ G V+ E+ C + G M+P ++
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 22/236 (9%)
Query: 237 KKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLA 293
K ++F LG+G FG VY N +A+K + ++ +G
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQN------KFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKIL 353
E+ I + H++ ++ L+ +F P G L K L + + +
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFM 121
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
+A A++Y +++KV+HRD+K N+L+ ++ DFG + + R
Sbjct: 122 EELADALHYC---HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR------- 171
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVD 469
+ GT+ Y+ PE + D++ G + E + G P + H + +V+
Sbjct: 172 XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 227
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 92/224 (41%), Gaps = 22/224 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAIIXXXXXXX 305
LG+G FG VY N +A+K + ++ +G E+ I
Sbjct: 22 LGKGKFGNVYLAREKQN------KFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQN 365
+ H++ ++ L+ +F P G L K L + + + +A A++Y
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYC-- 130
Query: 366 EYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+++KV+HRD+K N+L+ ++ DFG + + R + GT+ Y+ PE
Sbjct: 131 -HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-------XMCGTLDYLPPE 182
Query: 426 CFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVD 469
+ D++ G + E + G P + H + +V+
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 116
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ +FG + + R +
Sbjct: 117 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT------ 167
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 168 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 15/217 (6%)
Query: 235 ELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQ-YHVDNTQIAVKKFSRDSIKSKGDFLA 293
++K + + LGEG F VYK + +Q + ++ + ++D I L
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTA--LR 61
Query: 294 ELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKIL 353
E+ ++ K + LV+DFM LE + S +T + Y ++
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 354 TGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
T + YL + ++HRDLK +N+LLD + +L DFGLA++ + +Y H +V
Sbjct: 121 T--LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX-HQVV 174
Query: 414 GVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
T Y APE + D++ G ++ E++
Sbjct: 175 ----TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 32/252 (12%)
Query: 229 REFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS- 287
++ K KE+ + F E LGE FG VYKG H + TQ K +D +
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKG--HLFGPAPGEQTQAVAIKTLKDKAEGP 71
Query: 288 -KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE------ 340
+ +F E + G + L +++ + +G L ++L S
Sbjct: 72 LREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 341 -------QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGD 393
+ L ++ +A+ + YL + + VVH+DL N+L+ N ++ D
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISD 188
Query: 394 FGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV---- 449
GL R + + Y G +P + ++APE GK + +SD++ +G V+ EV
Sbjct: 189 LGLFREV-YAADYYKLLGNSLLP--IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 450 ---CGRSPGNMI 458
CG S +++
Sbjct: 246 QPYCGYSNQDVV 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAEL 295
A +F LG+G FG VY + Q +A+K + ++ G E+
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---LAREKQ---SKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 296 AIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTS---EQVTLNWNHRYKI 352
I G+ H+ ++ L+ ++ P G++ + L S EQ T +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------ 115
Query: 353 LTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
+T +A+A+ Y + ++V+HRD+K N+LL + ++ +FG + + R +
Sbjct: 116 ITELANALSYC---HSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT------ 166
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
+ GT+ Y+ PE + D++ G + E + G+ P +Q+
Sbjct: 167 -TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE 215
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAI-----ENERNSYAEHGLVGVPGTMGYVAPE 425
V+HRDLK SN+L++++ + ++ DFGLAR I +N + + G+V T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 426 CFHT-GKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQ 461
T K + DV+ G ++ E+ R PG HQ
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 34/174 (19%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDG--NKANHFVAIEFDTVKQGFDPDDNHLGL 72
GLAF +AP D+ P + G +LGL F D + + VA+EFDT +DP+ H+G+
Sbjct: 86 GLAFFLAPPDTQP--QARGGFLGL---FADRAHDASYQTVAVEFDTYSNAWDPNYTHIGI 140
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPL---L 129
+ N + S+K P Y G + + Y +K + + P +
Sbjct: 141 DTNGIESKKTTPFDMVY------GEKANIVITYQASTKALAASL-----VFPVSQTSYAV 189
Query: 130 KETINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQTKKEKDWKWLV 183
++L+D L GFSA+TG L+ V++T W + V
Sbjct: 190 SARVDLRDILPEYVRVGFSATTG-------------LNAGVVETHDIVSWSFAV 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF---LAELAI 297
+F+ M LG+G FG V D+ + AVK +D + D + E +
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELY------AVKILKKDVVIQDDDVECTMVEKRV 73
Query: 298 IXXXXXXXXXXXXGWCHEK-GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGV 356
+ C + +L V +++ G L +Y + H +
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEI 130
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP 416
A +++LQ+ + +++RDLK N++LD++ + ++ DFG+ + EN + G P
Sbjct: 131 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTP 185
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
Y+APE D + FG ++ E++ G++P
Sbjct: 186 ---DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 34/302 (11%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+LG G +G V ++ + HV+ ++K S S S L E+A++
Sbjct: 44 KLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLDHPNIM 99
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ +K LV + G L + ++ N I+ V S V YL +
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEII---HRMKFNEVDAAVIIKQVLSGVTYL---H 153
Query: 368 DQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAP 424
+VHRDLK N+LL++ D ++ DFGL+ EN++ + GT Y+AP
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK------MKERLGTAYYIAP 207
Query: 425 ECFHTGKATPESDVFGFGAVVLEVVCGRSP-GNMIPH------QQHAYTLVDWVWMLHRE 477
E K + DV+ G ++ ++ G P G ++ YT W E
Sbjct: 208 EVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE 266
Query: 478 GHIQDAVDQRLNINSVVDEAKRLLLLGLACSHP-IASERPKTEDILQIISGTSTVPYVPQ 536
G +D + Q L +S +R + A HP I K E +++ S + + + +
Sbjct: 267 G-AKDLIKQMLQFDS-----QRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRK 320
Query: 537 FK 538
F+
Sbjct: 321 FQ 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + + +HRDL A NILL ++ DFGLAR I+N+ N Y G +
Sbjct: 177 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARL 232
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQHAYTLV 468
P + ++APE T ESDV+ +G + E+ G SP +P Y ++
Sbjct: 233 P--VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + + +HRDL A NILL ++ DFGLAR I+N+ N Y G +
Sbjct: 170 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARL 225
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQHAYTLV 468
P + ++APE T ESDV+ +G + E+ G SP +P Y ++
Sbjct: 226 P--VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIX 299
T+ + +G G + + + I + N + AVK KSK D E+ I+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCI------HKATNMEFAVKIID----KSKRDPTEEIEILL 70
Query: 300 XXXXXXXXXXXGWCHEKGKLL-LVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVAS 358
++ GK + +V + M G L L Q + +L +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL---LDKILRQKFFSEREASAVLFTITK 127
Query: 359 AVYYLQNEYDQKVVHRDLKASNIL-LDADFN---ARLGDFGLARAIENERNSYAEHGLVG 414
V YL + Q VVHRDLK SNIL +D N R+ DFG A+ + AE+GL+
Sbjct: 128 TVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR------AENGLLM 178
Query: 415 VPG-TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
P T +VAPE D++ G ++ ++ G +P
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + + +HRDL A NILL ++ DFGLAR I+N+ N Y G +
Sbjct: 172 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARL 227
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQHAYTLV 468
P + ++APE T ESDV+ +G + E+ G SP +P Y ++
Sbjct: 228 P--VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
++G+G G VY + Q ++A+++ + K + E+ ++
Sbjct: 28 KIGQGASGTVYTAMDVATGQ------EVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+L +V +++ GSL ++ VT +I + L+ +
Sbjct: 82 NYLDSYLVGDELWVVMEYLAGGSL-------TDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
+V+HR++K+ NILL D + +L DFG I E++ + +VG P ++APE
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--TMVGTP---YWMAPEVV 189
Query: 428 HTGKATPESDVFGFGAVVLEVVCGRSP 454
P+ D++ G + +E++ G P
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + + +HRDL A NILL ++ DFGLAR I+N+ N Y G +
Sbjct: 177 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN-YVVKGNARL 232
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQHAYTLV 468
P + ++APE T ESDV+ +G + E+ G SP +P Y ++
Sbjct: 233 P--VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+ +L V +++ G L ++ Q L H ++ A+ YL +++ +++RD
Sbjct: 78 ESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL---HERGIIYRD 131
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD++ + +L D+G+ + E R G P Y+APE
Sbjct: 132 LKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTP---NYIAPEILRGEDYGFS 186
Query: 436 SDVFGFGAVVLEVVCGRSPGNMI 458
D + G ++ E++ GRSP +++
Sbjct: 187 VDWWALGVLMFEMMAGRSPFDIV 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+ +L V +++ G L ++ Q L H ++ A+ YL +++ +++RD
Sbjct: 82 ESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL---HERGIIYRD 135
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD++ + +L D+G+ + E R G P Y+APE
Sbjct: 136 LKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTP---NYIAPEILRGEDYGFS 190
Query: 436 SDVFGFGAVVLEVVCGRSPGNMI 458
D + G ++ E++ GRSP +++
Sbjct: 191 VDWWALGVLMFEMMAGRSPFDIV 213
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + + +HRDL A NILL ++ DFGLAR I+N+ N Y G +
Sbjct: 154 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKGNARL 209
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSPGNMIPHQQHAYTLV 468
P + ++APE T ESDV+ +G + E+ G SP +P Y ++
Sbjct: 210 P--VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+ +L V +++ G L ++ Q L H ++ A+ YL +++ +++RD
Sbjct: 93 ESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL---HERGIIYRD 146
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD++ + +L D+G+ + E R G P Y+APE
Sbjct: 147 LKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTP---NYIAPEILRGEDYGFS 201
Query: 436 SDVFGFGAVVLEVVCGRSPGNMI 458
D + G ++ E++ GRSP +++
Sbjct: 202 VDWWALGVLMFEMMAGRSPFDIV 224
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF---LAELAI 297
+F+ M LG+G FG V D+ + AVK +D + D + E +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELY------AVKILKKDVVIQDDDVECTMVEKRV 394
Query: 298 IXXXXXXXXXXXXGWCHEK-GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGV 356
+ C + +L V +++ G L +Y + H +
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEI 451
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP 416
A +++LQ+ + +++RDLK N++LD++ + ++ DFG+ + EN + G P
Sbjct: 452 AIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTP 506
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
Y+APE D + FG ++ E++ G++P
Sbjct: 507 ---DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 96/244 (39%), Gaps = 49/244 (20%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXXX 306
+GEG +G+V K + D + +A+KKF S D K + E+ ++
Sbjct: 33 VGEGSYGMVMK--CRNKDTGRI----VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 307 XXXXGWCHEKGKLLLVYDFMPN---GSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYL 363
C +K + LV++F+ + LE + G QV + ++I+ G+
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVV--QKYLFQIINGIGFC---- 140
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ ++HRD+K NIL+ +L DFG AR + Y + T Y A
Sbjct: 141 ---HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE-----VATRWYRA 192
Query: 424 PECF----HTGKATPESDVFGFGAVVLEVVCGR-----------------SPGNMIPHQQ 462
PE GKA DV+ G +V E+ G GN+IP Q
Sbjct: 193 PELLVGDVKYGKAV---DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 463 HAYT 466
+
Sbjct: 250 ELFN 253
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
+ +L V +++ G L ++ Q L H ++ A+ YL +++ +++RD
Sbjct: 125 ESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALNYL---HERGIIYRD 178
Query: 376 LKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
LK N+LLD++ + +L D+G+ + E R G P Y+APE
Sbjct: 179 LKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTP---NYIAPEILRGEDYGFS 233
Query: 436 SDVFGFGAVVLEVVCGRSPGNMI 458
D + G ++ E++ GRSP +++
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIV 256
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 249 LGE-GGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
+GE G FG VYK Q + A K S + D++ E+ I+
Sbjct: 17 IGELGDFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ + L ++ +F G+++ + +T + + A+ YL +
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES--QIQVVCKQTLDALNYL---H 125
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLA----RAIENERNSYAEHGLVGVPGTMGYVA 423
D K++HRDLKA NIL D + +L DFG++ R R+S+ GT ++A
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI--------GTPYWMA 177
Query: 424 PECF--HTGKATP---ESDVFGFGAVVLEV 448
PE T K P ++DV+ G ++E+
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 32/249 (12%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KG 289
K KE+ + F E LGE FG VYKG H + TQ K +D + +
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKG--HLFGPAPGEQTQAVAIKTLKDKAEGPLRE 57
Query: 290 DFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE--------- 340
+F E + G + L +++ + +G L ++L S
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 341 ----QVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
+ L ++ +A+ + YL + + VVH+DL N+L+ N ++ D GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 397 ARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV------- 449
R + + Y G +P + ++APE GK + +SD++ +G V+ EV
Sbjct: 175 FREV-YAADYYKLLGNSLLP--IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY 231
Query: 450 CGRSPGNMI 458
CG S +++
Sbjct: 232 CGYSNQDVV 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQ--YHVDNTQIAVKKFSRD-------- 283
KE K N++ L +G F K I+ D Y + + ++ + RD
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFN---KIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 284 -SIKSK-GDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL---EKYLYGT 338
SIKSK DF EL II G ++ ++Y++M N S+ ++Y +
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 339 SEQVT--LNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
+ T + I+ V ++ Y+ NE + + HRD+K SNIL+D + +L DFG
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFG- 197
Query: 397 ARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
E + + G GT ++ PE F
Sbjct: 198 ------ESEYMVDKKIKGSRGTYEFMPPEFF 222
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGF--DPDDNHLGL 72
GLAF +AP S P S G +LGL ++ G+ VA+EFDT + DP H+G
Sbjct: 89 GLAFFLAPVASAP--DSGGGFLGLFDSAV-GDTTYQTVAVEFDTYENTVFTDPPYTHIGF 145
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKET 132
++NS+ S K V +L++G + V + Y+ KL+ + +L +
Sbjct: 146 DVNSISSIKTV------KWSLANGEAAKVLITYNSAVKLLVASLVYPSSK--TSFILADI 197
Query: 133 INLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
++L L GFSA+TG +I+ + V SW+
Sbjct: 198 VDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSF 233
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 40/269 (14%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
++ L LV D+ G L L +++ + Y + V + + + VH
Sbjct: 160 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY-----IGEMVLAIDSIHQLHYVH 214
Query: 374 RDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHT---- 429
RD+K N+LLD + + RL DFG + N+ + VG P Y++PE
Sbjct: 215 RDIKPDNVLLDVNGHIRLADFGSCLKM-NDDGTVQSSVAVGTP---DYISPEILQAMEDG 270
Query: 430 -GKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVD-WVWMLHREGHIQDAVDQR 487
GK PE D + G + E++ G +P +A +LV+ + +++ E Q
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPF-------YAESLVETYGKIMNHEERFQFPS--- 320
Query: 488 LNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQ--IISGTS-------TVPYVPQFK 538
++ V +EAK L+ L CS + ED + G + PY+P
Sbjct: 321 -HVTDVSEEAKD-LIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVS 378
Query: 539 PAFTWPSTSPPISMFDSILSSITLSSPGS 567
PS + + D +L + + PGS
Sbjct: 379 S----PSDTSNFDVDDDVLRNTEILPPGS 403
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 110/269 (40%), Gaps = 40/269 (14%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
++ L LV D+ G L L +++ + Y + V + + + VH
Sbjct: 144 QDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY-----IGEMVLAIDSIHQLHYVH 198
Query: 374 RDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHT---- 429
RD+K N+LLD + + RL DFG + N+ + VG P Y++PE
Sbjct: 199 RDIKPDNVLLDVNGHIRLADFGSCLKM-NDDGTVQSSVAVGTP---DYISPEILQAMEDG 254
Query: 430 -GKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVD-WVWMLHREGHIQDAVDQR 487
GK PE D + G + E++ G +P +A +LV+ + +++ E Q
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPF-------YAESLVETYGKIMNHEERFQFPS--- 304
Query: 488 LNINSVVDEAKRLLLLGLACSHPIASERPKTEDILQ--IISGTS-------TVPYVPQFK 538
++ V +EAK L+ L CS + ED + G + PY+P
Sbjct: 305 -HVTDVSEEAKD-LIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVS 362
Query: 539 PAFTWPSTSPPISMFDSILSSITLSSPGS 567
PS + + D +L + + PGS
Sbjct: 363 S----PSDTSNFDVDDDVLRNTEILPPGS 387
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKA 432
HRD+K NIL+ AD A L DFG+A A +E+ + L GT+ Y APE F A
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ----LGNTVGTLYYXAPERFSESHA 212
Query: 433 TPESDVFGFGAVVLEVVCGRSP 454
T +D++ V+ E + G P
Sbjct: 213 TYRADIYALTCVLYECLTGSPP 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIX 299
T+ + +G G + + + I + N + AVK KSK D E+ I+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCI------HKATNXEFAVKIID----KSKRDPTEEIEILL 70
Query: 300 XXXXXXXXXXXGWCHEKGKLLLVYDFMPNGS--LEKYLYGTSEQVTLNWNHRYKILTGVA 357
++ GK + V + G L+K L Q + +L +
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTIT 126
Query: 358 SAVYYLQNEYDQKVVHRDLKASNIL-LDADFN---ARLGDFGLARAIENERNSYAEHGLV 413
V YL + Q VVHRDLK SNIL +D N R+ DFG A+ + AE+GL+
Sbjct: 127 KTVEYL---HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR------AENGLL 177
Query: 414 GVPG-TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
P T +VAPE D++ G ++ + G +P
Sbjct: 178 XTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 241 NNFH--ESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAII 298
NNF+ S LG G F +V + I Q + +KK R + + L E+A++
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK---FLKKRRRGQ-DCRAEILHEIAVL 82
Query: 299 XXXXXXXXXXXXGWCHEK-GKLLLVYDFMPNGSL-EKYLYGTSEQVTLNWNHRYKILTGV 356
+E +++L+ ++ G + L +E V+ N +++ +
Sbjct: 83 ELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVS--ENDVIRLIKQI 140
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADF---NARLGDFGLARAIENERNSYAEHGLV 413
VYYL + +VH DLK NILL + + + ++ DFG++R I + L
Sbjct: 141 LEGVYYL---HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE------LR 191
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ GT Y+APE + T +D++ G + ++ SP
Sbjct: 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 275 IAVKKFSRDSIKSK-GDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL-- 331
+A+K ++++++ K G E+A++ G L L+ + G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 332 ---EKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL---LDA 385
EK Y + L + V AV YL +D +VHRDLK N+L LD
Sbjct: 106 RIVEKGFYTERDASRLIFQ--------VLDAVKYL---HDLGIVHRDLKPENLLYYSLDE 154
Query: 386 DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVV 445
D + DFGL++ +E+ + L GT GYVAPE + D + G +
Sbjct: 155 DSKIMISDFGLSK-MEDPGSV-----LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 446 LEVVCGRSP 454
++CG P
Sbjct: 209 YILLCGYPP 217
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 14/155 (9%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVK-QGFDPDDNHLGLN 73
G+AF + P S P + G +LG+ ++ N A VA+EFDT+ G+DP H+G++
Sbjct: 86 GIAFALVPVGSEPRRN--GGYLGVFDSDVYNNSA-QTVAVEFDTLSNSGWDPSMKHIGID 142
Query: 74 INSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKETI 133
+NS+ S V L++G + + + Y+ + L+ + +L E +
Sbjct: 143 VNSIKSIATVSWD------LANGENAEILITYNAATSLLVASLVHPSRRTSY--ILSERV 194
Query: 134 NLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
++ + L GFSA+TG +I+ + V SW+
Sbjct: 195 DITNELPEYVSVGFSATTGLSEGYIETHDVLSWSF 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 275 IAVKKFSRDSIKSK-GDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL-- 331
+A+K ++++++ K G E+A++ G L L+ + G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 332 ---EKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL---LDA 385
EK Y + L + V AV YL +D +VHRDLK N+L LD
Sbjct: 106 RIVEKGFYTERDASRLIFQ--------VLDAVKYL---HDLGIVHRDLKPENLLYYSLDE 154
Query: 386 DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVV 445
D + DFGL++ +E+ + L GT GYVAPE + D + G +
Sbjct: 155 DSKIMISDFGLSK-MEDPGSV-----LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 446 LEVVCGRSP 454
++CG P
Sbjct: 209 YILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 275 IAVKKFSRDSIKSK-GDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL-- 331
+A+K ++++++ K G E+A++ G L L+ + G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 332 ---EKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL---LDA 385
EK Y + L + V AV YL +D +VHRDLK N+L LD
Sbjct: 106 RIVEKGFYTERDASRLIFQ--------VLDAVKYL---HDLGIVHRDLKPENLLYYSLDE 154
Query: 386 DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVV 445
D + DFGL++ +E+ + L GT GYVAPE + D + G +
Sbjct: 155 DSKIMISDFGLSK-MEDPGSV-----LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208
Query: 446 LEVVCGRSP 454
++CG P
Sbjct: 209 YILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 36/242 (14%)
Query: 224 LPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQ--IAVKKFS 281
+PG ++K+ + + + LG G F V I D+ TQ +A+K +
Sbjct: 1 MPGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEV----ILAEDK----RTQKLVAIKCIA 52
Query: 282 RDSIKSK-GDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL-----EKYL 335
+ +++ K G E+A++ G L L+ + G L EK
Sbjct: 53 KKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF 112
Query: 336 YGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL---LDADFNARLG 392
Y + L + V AV YL +D +VHRDLK N+L LD D +
Sbjct: 113 YTERDASRLIFQ--------VLDAVKYL---HDLGIVHRDLKPENLLYYSLDEDSKIMIS 161
Query: 393 DFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGR 452
DFGL++ +E+ + L GT GYVAPE + D + G + ++CG
Sbjct: 162 DFGLSK-MEDPGSV-----LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 453 SP 454
P
Sbjct: 216 PP 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAI-----ENERNSYAEHGLVGVPGTMGYVAPE 425
V+HRDLK SN+L++++ + ++ DFGLAR I +N + + G+ T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 426 CFHT-GKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQ 461
T K + DV+ G ++ E+ R PG HQ
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 42/282 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG+G +GIVY G N +IA+K+ + E+A+
Sbjct: 30 LGKGTYGIVYAGRDLSN------QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGT-----SEQVTLNWNHRYKILTGVASAVYYL 363
G E G + + + +P GSL L + T+ + + +IL G+ YL
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLK----YL 138
Query: 364 QNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+D ++VHRD+K N+L++ ++ DFG ++ + N E GT+ Y+
Sbjct: 139 ---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-INPCTET----FTGTLQYM 190
Query: 423 APECFHTGKA--TPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHI 480
APE G +D++ G ++E+ G+ P + Q A V ++ +H E
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV-GMFKVHPE--- 246
Query: 481 QDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDIL 522
S+ EAK + L C P +R D+L
Sbjct: 247 --------IPESMSAEAKAFI---LKCFEPDPDKRACANDLL 277
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAI-----ENERNSYAEHGLVGVPGTMGYVAPE 425
V+HRDLK SN+L++++ + ++ DFGLAR I +N + + G+ T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 426 CFHT-GKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQ 461
T K + DV+ G ++ E+ R PG HQ
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ 231
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ + +K VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-AEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPL--- 128
+++NS+ S K L +G V + ++ + ++ V + ++ ++
Sbjct: 139 IDVNSIKSVNTKSWK------LQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYT 192
Query: 129 LKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTL 166
L + ++LKD + GFSA+TG + + V SW+
Sbjct: 193 LSDVVSLKDVVPEWVRIGFSATTGAEY-AAHEVLSWSF 229
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGF--DPDDNHLGL 72
GLAF +AP S P S G +LGL ++ G+ VA+EFDT + DP H+G
Sbjct: 89 GLAFFLAPVASAP--DSGGGFLGLFDSAVSGSTYQT-VAVEFDTYENTVFTDPPYTHIGF 145
Query: 73 NINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKET 132
++NS+ S K V +L++G + V + Y+ KL+ + + +L +
Sbjct: 146 DVNSISSIKTV------KWSLANGEAAKVLITYNSAVKLLVASLVY--PSSKTSFILADI 197
Query: 133 INLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
++L L GFSA+TG I+ + V SW+
Sbjct: 198 VDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSF 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 315 EKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHR 374
E+G L++D + G L + + + +H + + AV + + VVHR
Sbjct: 92 EEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHC---HQMGVVHR 145
Query: 375 DLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGK 431
DLK N+LL + +L DFGLA +E E+ ++ G GT GY++PE
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW-----FGFAGTPGYLSPEVLRKDP 200
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++ G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 42/282 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LG+G +GIVY G N +IA+K+ + E+A+
Sbjct: 16 LGKGTYGIVYAGRDLSN------QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGT-----SEQVTLNWNHRYKILTGVASAVYYL 363
G E G + + + +P GSL L + T+ + + +IL G+ YL
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLK----YL 124
Query: 364 QNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+D ++VHRD+K N+L++ ++ DFG ++ + N E GT+ Y+
Sbjct: 125 ---HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-INPCTET----FTGTLQYM 176
Query: 423 APECFHTGKA--TPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWMLHREGHI 480
APE G +D++ G ++E+ G+ P + Q A V ++ +H E
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPE--- 232
Query: 481 QDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPKTEDIL 522
S+ EAK + L C P +R D+L
Sbjct: 233 --------IPESMSAEAKAFI---LKCFEPDPDKRACANDLL 263
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 21/233 (9%)
Query: 226 GMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDS 284
G EF K ++N+ LG+G F +V + +H I KK S RD
Sbjct: 14 GRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRR-CVHKTTGLEFAAKIINTKKLSARDF 72
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTL 344
K E I E+ LV+D + G L + +
Sbjct: 73 QK----LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 128
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA---RLGDFGLARAIE 401
+ +H + + ++ Y + +VHR+LK N+LL + +L DFGLA +
Sbjct: 129 DASH---CIQQILESIAYC---HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 402 NERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ S A HG G P GY++PE + D++ G ++ ++ G P
Sbjct: 183 D---SEAWHGFAGTP---GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGL 412
+ AV YL ++ +VHRDLK N+L D ++ DFGL++ +E++ +
Sbjct: 157 ILEAVAYL---HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL------M 207
Query: 413 VGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
V GT GY APE PE D++ G + ++CG P
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 23/173 (13%)
Query: 5 PRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFD 64
P PA GL F + P +S P+ G LG+ F N F A+EFDT + +D
Sbjct: 84 PEPA-----DGLTFFMVPPNS--PQGEDGGNLGV---FKPPEGDNAF-AVEFDTFQNTWD 132
Query: 65 PDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMP 124
P H+G+++NS+VS K + + L +G V ++YD +K++ V + ++
Sbjct: 133 PQVPHIGIDVNSIVSSKTLHFQ------LENGGVANVVIKYDSPTKILNVVLAF--HSVG 184
Query: 125 QKPLLKETINLKDYLKPESY--FGFSASTGYPH--IQLNCVRSWTLDIDVIQT 173
L ++LK + G SA+TGY ++ + + SW+ + +T
Sbjct: 185 TVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFTSSLQET 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 98/245 (40%), Gaps = 49/245 (20%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQI-AVKKF--SRDSIKSKGDFLAELAIIXXXXXX 304
++GEG +G+V+K + D QI A+KKF S D K L E+ ++
Sbjct: 10 KIGEGSYGVVFKC-------RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 305 XXXXXXGWCHEKGKLLLVYDFMPNG---SLEKYLYGTSEQV--TLNWNHRYKILTGVASA 359
K +L LV+++ + L++Y G E + ++ W A
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQA 114
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTM 419
V + + +HRD+K NIL+ +L DFG AR + + Y + T
Sbjct: 115 VNFC---HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-----ATR 166
Query: 420 GYVAPECF-HTGKATPESDVFGFGAVVLEVVCG-----------------RSPGNMIPHQ 461
Y +PE + P DV+ G V E++ G ++ G++IP
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRH 226
Query: 462 QHAYT 466
Q ++
Sbjct: 227 QQVFS 231
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKG---DFLAELAI 297
++F LG+G FG VY + + H +A+K + I+ +G E+ I
Sbjct: 23 DDFEIGRPLGKGKFGNVY---LAREKKSHFI---VALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 298 IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
+ +++ ++ L+ ++ P G L K L + T + I+ +A
Sbjct: 77 QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELA 133
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPG 417
A+ Y + +KV+HRD+K N+LL ++ DFG + + R + G
Sbjct: 134 DALMYC---HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK-------TMCG 183
Query: 418 TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQ 462
T+ Y+ PE + D++ G + E++ G P H +
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPA 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 22/220 (10%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDSIKSKGDFLAELAII 298
T+++ LG+G F +V + + Q + I KK S RD K + E I
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKI-INTKKLSARDHQKLE----REARIC 84
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR-YKILTGVA 357
E+G LV+D + G L + + + +H ++IL V
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESV- 143
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVG 414
+ + +VHRDLK N+LL + +L DFGLA ++ E+ ++ G
Sbjct: 144 ------NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW-----FG 192
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT GY++PE D++ G ++ ++ G P
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 13/206 (6%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD-FLAELAIIXXXXXXXXX 307
+GEG +G+V H V T++A+KK S ++ L E+ I+
Sbjct: 51 IGEGAYGMVSSAYDH------VRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
+ ++ +E LY + L+ +H L + + Y+ +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYI---H 161
Query: 368 DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECF 427
V+HRDLK SN+L++ + ++ DFGLAR + E + L T Y APE
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG--FLTEXVATRWYRAPEIM 219
Query: 428 HTGKATPES-DVFGFGAVVLEVVCGR 452
K +S D++ G ++ E++ R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 33/219 (15%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSI--KSKGDFLAELAIIXXXXXX-X 305
+G G +G V N H + QI K R ++ K + L +L ++
Sbjct: 30 IGRGAYGSV-------NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNG--SLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYL 363
G +G + + M KY+Y + V + KI A+ +L
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEILGKITLATVKALNHL 141
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFG----LARAIENERNSYAEHGLVGVPGTM 419
+ + K++HRD+K SNILLD N +L DFG L +I R++ G
Sbjct: 142 KE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA----------GCR 189
Query: 420 GYVAPECFHTGKATP----ESDVFGFGAVVLEVVCGRSP 454
Y+APE + SDV+ G + E+ GR P
Sbjct: 190 PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLK 377
KL L+ D++ G L +L E+ T H +I G V L++ + +++RD+K
Sbjct: 133 KLHLILDYINGGELFTHL-SQRERFT---EHEVQIYVG--EIVLALEHLHKLGIIYRDIK 186
Query: 378 ASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESD 437
NILLD++ + L DFGL++ + A GT+ Y+AP+ G + +
Sbjct: 187 LENILLDSNGHVVLTDFGLSKEFVADETERA----YDFCGTIEYMAPDIVRGGDSGHDKA 242
Query: 438 V--FGFGAVVLEVVCGRSP 454
V + G ++ E++ G SP
Sbjct: 243 VDWWSLGVLMYELLTGASP 261
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYS--DW 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 89/227 (39%), Gaps = 34/227 (14%)
Query: 241 NNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXX 300
+F RLG G +G V+K + + + ++ + +D + LAE+
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK----LAEVGSHEK 112
Query: 301 XXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYL--YGTSEQVTLNWNHRYKILTGVAS 358
E+G +L + + SL+++ +G S W + L +A
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA- 171
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV--- 415
+ + Q +VH D+K +NI L +LGDFGL E G G
Sbjct: 172 ------HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL----------LVELGTAGAGEV 215
Query: 416 -PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNM-IPH 460
G Y+APE T +DVF G +LEV C NM +PH
Sbjct: 216 QEGDPRYMAPELLQGSYGT-AADVFSLGLTILEVAC-----NMELPH 256
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 115/284 (40%), Gaps = 35/284 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G F +V + I Q + V KF+ S D E +I
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKI-VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 309 XXGWCHEKGKLLLVYDFMPNGSL---------EKYLYGTSEQVTLNWNHRYKILTGVASA 359
G L +V++FM L ++Y SE V ++ + + A
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY--SEAVASHY------MRQILEA 142
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNA---RLGDFGLARAIENERNSYAEHGLV--G 414
+ Y +D ++HRD+K N+LL + N+ +LGDFG+A + E GLV G
Sbjct: 143 LRYC---HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-------GESGLVAGG 192
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWML 474
GT ++APE DV+G G ++ ++ G P + + M
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 475 HRE-GHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK 517
R+ HI ++ + ++D A+R+ + A +HP ER +
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYE-ALNHPWLKERDR 295
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y G +
Sbjct: 207 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 262
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 263 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y G +
Sbjct: 209 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 264
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 265 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y G +
Sbjct: 202 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 257
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 258 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 315 EKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHR 374
E+G L++D + G L + + + +H + + AV + + VVHR
Sbjct: 81 EEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHC---HQMGVVHR 134
Query: 375 DLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGK 431
+LK N+LL + +L DFGLA +E E+ ++ G GT GY++PE
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW-----FGFAGTPGYLSPEVLRKDP 189
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++ G P
Sbjct: 190 YGKPVDLWACGVILYILLVGYPP 212
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + +K +HRDL A NILL ++ DFGLAR I + + Y G +
Sbjct: 200 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-YVRKGDARL 255
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVV-CGRSP 454
P + ++APE T +SDV+ FG ++ E+ G SP
Sbjct: 256 P--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 76
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 130
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 131 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 181
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 24/230 (10%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD- 290
K ++L+ ++ +G G FG V ++ H V A+K S+ + + D
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKV----YAMKLLSKFEMIKRSDS 113
Query: 291 --FLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNH 348
F E I+ + L +V ++MP G L + ++ V W
Sbjct: 114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWAR 171
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
Y A V L + +HRD+K N+LLD + +L DFG + E
Sbjct: 172 FY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 409 EHGLVGVPGTMGYVAPECFHT----GKATPESDVFGFGAVVLEVVCGRSP 454
+ + GT Y++PE + G E D + G + E++ G +P
Sbjct: 227 DTAV----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 76
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 130
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 131 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 181
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 24/230 (10%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD- 290
K ++L+ ++ +G G FG V ++ H V A+K S+ + + D
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKV----YAMKLLSKFEMIKRSDS 118
Query: 291 --FLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNH 348
F E I+ + L +V ++MP G L + ++ V W
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWAR 176
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
Y A V L + +HRD+K N+LLD + +L DFG + E
Sbjct: 177 FY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 409 EHGLVGVPGTMGYVAPECFHT----GKATPESDVFGFGAVVLEVVCGRSP 454
+ + GT Y++PE + G E D + G + E++ G +P
Sbjct: 232 DTAV----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 90/230 (39%), Gaps = 24/230 (10%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD- 290
K ++L+ ++ +G G FG V ++ H V A+K S+ + + D
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKV----YAMKLLSKFEMIKRSDS 118
Query: 291 --FLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNH 348
F E I+ + L +V ++MP G L + ++ V W
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWAR 176
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
Y A V L + +HRD+K N+LLD + +L DFG + E
Sbjct: 177 FY-----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 409 EHGLVGVPGTMGYVAPECFHT----GKATPESDVFGFGAVVLEVVCGRSP 454
+ + GT Y++PE + G E D + G + E++ G +P
Sbjct: 232 DTAV----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L L+ D+ NGSL YL T TL+ K+ S + +L E +
Sbjct: 109 QLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP-----GTMGYVAPECF 427
HRDLK+ NIL+ + + D GLA ++ N V +P GT Y+ PE
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE------VDIPPNTRVGTKRYMPPEVL 218
Query: 428 HTG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ FG ++ EV G ++ Q Y
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 272 NTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK-LLLVYDFMPNGS 330
N + AVK KSK D E+ I+ ++ GK + LV + M G
Sbjct: 52 NMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGE 107
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL-LDADFNA 389
L L Q + +L + V YL + Q VVHRDLK SNIL +D N
Sbjct: 108 L---LDKILRQKFFSEREASFVLHTIGKTVEYL---HSQGVVHRDLKPSNILYVDESGNP 161
Query: 390 ---RLGDFGLARAIENERNSYAEHGLVGVPG-TMGYVAPECFHTGKATPESDVFGFGAVV 445
R+ DFG A+ + AE+GL+ P T +VAPE D++ G ++
Sbjct: 162 ECLRICDFGFAKQLR------AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 446 LEVVCGRSP 454
++ G +P
Sbjct: 216 YTMLAGYTP 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 81/189 (42%), Gaps = 22/189 (11%)
Query: 272 NTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK-LLLVYDFMPNGS 330
N + AVK KSK D E+ I+ ++ GK + LV + M G
Sbjct: 52 NMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGE 107
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNIL-LDADFNA 389
L L Q + +L + V YL + Q VVHRDLK SNIL +D N
Sbjct: 108 L---LDKILRQKFFSEREASFVLHTIGKTVEYL---HSQGVVHRDLKPSNILYVDESGNP 161
Query: 390 ---RLGDFGLARAIENERNSYAEHGLVGVPG-TMGYVAPECFHTGKATPESDVFGFGAVV 445
R+ DFG A+ + AE+GL+ P T +VAPE D++ G ++
Sbjct: 162 ECLRICDFGFAKQLR------AENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 446 LEVVCGRSP 454
++ G +P
Sbjct: 216 YTMLAGYTP 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNIL-LDADFNARL--GDFGLARAIENERNSYA 408
++ V SAV YL ++ +VHRDLK N+L L + N+++ DFGL++ +N S A
Sbjct: 111 VIQQVLSAVKYL---HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA 167
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT GYVAPE + D + G + ++CG P
Sbjct: 168 -------CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 22/149 (14%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----D 368
H +L L+ + GSL YL T TL+ +I+ +AS + +L E
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE--- 425
+ HRDLK+ NIL+ + + D GLA + ++ + + G GT Y+APE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 426 ------CFHTGKATPESDVFGFGAVVLEV 448
CF + K D++ FG V+ EV
Sbjct: 191 ETIQVDCFDSYKRV---DIWAFGLVLWEV 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 220
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 371 VVHRDLKASNILLD-----ADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
+VHRDLK NIL+ A + DFGL + + R+S++ GVPGT G++APE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS--GVPGTEGWIAPE 196
Query: 426 CF-HTGKATP--ESDVFGFGAVVLEVVC-GRSP-GNMIPHQQHAYTLVDWVWMLHREGHI 480
K P D+F G V V+ G P G + Q + + LH E H
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH- 255
Query: 481 QDAVDQRL 488
+D + + L
Sbjct: 256 EDVIAREL 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 22/149 (14%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----D 368
H +L L+ + GSL YL T TL+ +I+ +AS + +L E
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE--- 425
+ HRDLK+ NIL+ + + D GLA + ++ + + G GT Y+APE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 426 ------CFHTGKATPESDVFGFGAVVLEV 448
CF + K D++ FG V+ EV
Sbjct: 191 ETIQVDCFDSYKRV---DIWAFGLVLWEV 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+ HRD+K N+LLD N ++ DFGLA R + E L + GT+ YVAPE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVF---RYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 431 KATPES-DVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDW 470
+ E DV+ G V+ ++ G P + Y+ DW
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--DW 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 24/212 (11%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAIIXXXXXXX 305
++GEG +G V+K N + H +A+K+ D L E+ ++
Sbjct: 9 KIGEGTYGTVFKA---KNRETH---EIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQV--TLNWNHRYKILTGVASAVYYL 363
H KL LV++F + L+KY + + + + +++L G+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---- 117
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ + V+HRDLK N+L++ + +L DFGLARA Y+ + T+ Y
Sbjct: 118 ---HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-----TLWYRP 169
Query: 424 PECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
P+ K S D++ G + E+ P
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLA-RAIENERNSYAE 409
K+ + A+YYL+ ++ V+HRD+K SNILLD +L DFG++ R ++++ +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 410 HGLVGVPGTMGYVAPECFHTGKATP-----ESDVFGFGAVVLEVVCGRSP 454
G Y+APE T +DV+ G ++E+ G+ P
Sbjct: 185 ------AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 22/149 (14%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----D 368
H +L L+ + GSL YL T TL+ +I+ +AS + +L E
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK 160
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE--- 425
+ HRDLK+ NIL+ + + D GLA + ++ + + G GT Y+APE
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 426 ------CFHTGKATPESDVFGFGAVVLEV 448
CF + K D++ FG V+ EV
Sbjct: 220 ETIQVDCFDSYKRV---DIWAFGLVLWEV 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K ++L+ + + G L +L +E+ +L + + L + V+YL + +++ H D
Sbjct: 80 KTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYL---HSKRIAHFD 133
Query: 376 LKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGK 431
LK NI LLD + +L DFG+A IE A + + GT +VAPE +
Sbjct: 134 LKPENIMLLDKNVPNPRIKLIDFGIAHKIE------AGNEFKNIFGTPEFVAPEIVNYEP 187
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
E+D++ G + ++ G SP
Sbjct: 188 LGLEADMWSIGVITYILLSGASP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K ++L+ + + G L +L +E+ +L + + L + V+YL + +++ H D
Sbjct: 87 KTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYL---HSKRIAHFD 140
Query: 376 LKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGK 431
LK NI LLD + +L DFG+A IE A + + GT +VAPE +
Sbjct: 141 LKPENIMLLDKNVPNPRIKLIDFGIAHKIE------AGNEFKNIFGTPEFVAPEIVNYEP 194
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
E+D++ G + ++ G SP
Sbjct: 195 LGLEADMWSIGVITYILLSGASP 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 249 LGEGGFGIVYKGIIHHND-QYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXX 307
LG G F +V K QY + K SR + S+ D E++I+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGV-SREDIEREVSILKEIQHPNVI 77
Query: 308 XXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY 367
K ++L+ + + G L +L +E+ +L + L + + VYYL +
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYL---H 131
Query: 368 DQKVVHRDLKASNILLDADFNA-----RLGDFGLARAIE--NERNSYAEHGLVGVPGTMG 420
++ H DLK NI+L D N ++ DFGLA I+ NE + GT
Sbjct: 132 SLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHKIDFGNE--------FKNIFGTPE 182
Query: 421 YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDSIKSKGDFLAELA 296
K ++N+ LG+G F +V + +H I KK S RD K + E
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRR-CVHKTTGLEFAAKIINTKKLSARDFQKLE----REAR 57
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGV 356
I E+ LV+D + G L + + + +H + +
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQI 114
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLV 413
++ Y + +VHR+LK N+LL + +L DFGLA + +S A HG
Sbjct: 115 LESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFA 168
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
G P GY++PE + D++ G ++ ++ G P
Sbjct: 169 GTP---GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 239 ATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELA 296
+ + + +LGEG +G VYK I V N +A+K+ + + G + E++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAI------DTVTNETVAIKRIRLEHEEEGVPGTAIREVS 85
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSE-QVTLNWNHRYKILTG 355
++ H +L L++++ N L+KY+ + + + + Y+++ G
Sbjct: 86 LLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-----RLGDFGLARA 399
V + ++ +HRDLK N+LL + ++GDFGLARA
Sbjct: 145 VNFC-------HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 316 KGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRD 375
K ++L+ + + G L +L +E+ +L + + L + V+YL + +++ H D
Sbjct: 101 KTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGVHYL---HSKRIAHFD 154
Query: 376 LKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGK 431
LK NI LLD + +L DFG+A IE A + + GT +VAPE +
Sbjct: 155 LKPENIMLLDKNVPNPRIKLIDFGIAHKIE------AGNEFKNIFGTPEFVAPEIVNYEP 208
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
E+D++ G + ++ G SP
Sbjct: 209 LGLEADMWSIGVITYILLSGASP 231
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 27/222 (12%)
Query: 248 RLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS--KGDFLAELAIIXXXXXXX 305
++GEG +G V+K N + H +A+K+ D L E+ ++
Sbjct: 9 KIGEGTYGTVFKA---KNRETH---EIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 306 XXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQV--TLNWNHRYKILTGVASAVYYL 363
H KL LV++F + L+KY + + + + +++L G+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC---- 117
Query: 364 QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ + V+HRDLK N+L++ + +L +FGLARA Y+ + T+ Y
Sbjct: 118 ---HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-----TLWYRP 169
Query: 424 PECFHTGKATPES-DVFGFGAVVLEVV-CGRS--PGNMIPHQ 461
P+ K S D++ G + E+ GR PGN + Q
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDSIKSKGDFLAELA 296
K ++N+ LG+G F +V + +H I KK S RD K + E
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRR-CVHKTTGLEFAAKIINTKKLSARDFQKLE----REAR 57
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGV 356
I E+ LV+D + G L + + + +H + +
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQI 114
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLV 413
++ Y + +VHR+LK N+LL + +L DFGLA + +S A HG
Sbjct: 115 LESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFA 168
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
G P GY++PE + D++ G ++ ++ G P
Sbjct: 169 GTP---GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 24/230 (10%)
Query: 232 KYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD- 290
K + L+ ++ +G G FG V ++ H V A+K S+ + + D
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQ--LVRHKASQKV----YAMKLLSKFEMIKRSDS 119
Query: 291 --FLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNH 348
F E I+ + L +V ++MP G L + ++ V W
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAK 177
Query: 349 RYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYA 408
Y A V L + ++HRD+K N+LLD + +L DFG ++ +
Sbjct: 178 FY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 409 EHGLVGVPGTMGYVAPECFHT----GKATPESDVFGFGAVVLEVVCGRSP 454
+ + GT Y++PE + G E D + G + E++ G +P
Sbjct: 233 DTAV----GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 343 TLNWNHRYKILTGVA----SAVYYLQNEYDQKVVHRDLKASNILLDAD--FNARLGDFGL 396
+L++ R K+++ + SA++YL N Q + HRD+K N L + F +L DFGL
Sbjct: 160 SLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGL 216
Query: 397 ARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKAT--PESDVFGFGAVVLEVVCGRSP 454
++ + N+ +G+ GT +VAPE +T + P+ D + G ++ ++ G P
Sbjct: 217 SKEFY-KLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 21/221 (9%)
Query: 238 KATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDSIKSKGDFLAELA 296
K ++N+ LG+G F +V + +H I KK S RD K + E
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRR-CVHKTTGLEFAAKIINTKKLSARDFQKLE----REAR 56
Query: 297 IIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGV 356
I E+ LV+D + G L + + + +H + +
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQI 113
Query: 357 ASAVYYLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLV 413
++ Y + +VHR+LK N+LL + +L DFGLA + +S A HG
Sbjct: 114 LESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFA 167
Query: 414 GVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
G P GY++PE + D++ G ++ ++ G P
Sbjct: 168 GTP---GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Query: 315 EKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHR 374
E+G LV+D + G L + + + +H + + AV + + VVHR
Sbjct: 74 EEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHC---HQMGVVHR 127
Query: 375 DLKASNILLDADFNA---RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGK 431
DLK N+LL + +L DFGLA ++ ++ ++ G GT GY++PE
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW-----FGFAGTPGYLSPEVLRKEA 182
Query: 432 ATPESDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++ G P
Sbjct: 183 YGKPVDIWACGVILYILLVGYPP 205
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
+ L LV D+ G L L +++ Y +A V + + + VH
Sbjct: 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFY-----LAEMVIAIDSVHQLHYVH 198
Query: 374 RDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHT---- 429
RD+K NIL+D + + RL DFG + E + VG P Y++PE
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKL-MEDGTVQSSVAVGTP---DYISPEILQAMEGG 254
Query: 430 -GKATPESDVFGFGAVVLEVVCGRSP 454
G+ PE D + G + E++ G +P
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD--FLAELAI 297
++ M LG G +G+V K HV + QI K R ++ S+ L +L I
Sbjct: 50 ADDLEPIMELGRGAYGVVEK-------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI 102
Query: 298 -IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQ-VTLNWNHRYKILTG 355
+ G +G + + + M + SL+K+ ++ T+ + KI
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+ A+ +L ++ V+HRD+K SN+L++A ++ DFG++ + +S A+ G
Sbjct: 162 IVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGC 216
Query: 416 PGTMG--YVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
M + PE G + +SD++ G ++E+ R P
Sbjct: 217 KPYMAPERINPELNQKGYSV-KSDIWSLGITMIELAILRFP 256
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 61/231 (26%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RD------------SIKSKGDFLAEL 295
+G+G +G V++G+ H +AVK FS RD ++ + D + L
Sbjct: 16 VGKGRYGEVWRGLWH--------GESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNI--L 65
Query: 296 AIIXXXXXXXXXXXXGWC----HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYK 351
I W HE G L YDF+ +LE +L +
Sbjct: 66 GFIASDMTSRNSSTQLWLITHYHEHGSL---YDFLQRQTLEPHLA-------------LR 109
Query: 352 ILTGVASAVYYLQNEY-----DQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
+ A + +L E + HRD K+ N+L+ ++ + D GLA + ++ +
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSD 168
Query: 407 YAEHGLVGVPGTMGYVAPE---------CFHTGKATPESDVFGFGAVVLEV 448
Y + G GT Y+APE CF + K T D++ FG V+ E+
Sbjct: 169 YLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 319 LLLVYDFMPNGSL-----EKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
L LV + G L EK Y + TL + V AVYYL +VH
Sbjct: 95 LYLVMQLVSGGELFDRIVEKGFYTEKDASTL--------IRQVLDAVYYLHR---MGIVH 143
Query: 374 RDLKASNILL---DADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
RDLK N+L D + + DFGL++ +E + + + GT GYVAPE
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDV-----MSTACGTPGYVAPEVLAQK 197
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
+ D + G + ++CG P
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
VA + +L + +K +HRDL A NILL + ++ DFGLAR I + Y G +
Sbjct: 208 VARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD-YVRKGDTRL 263
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVC-GRSP 454
P + ++APE + +SDV+ +G ++ E+ G SP
Sbjct: 264 P--LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 33/235 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKF--SRDSIKSKGDFLAELAIIXXXXXXXX 306
+G G +G+V + + Q+A+KK + D + + L EL I+
Sbjct: 62 IGNGAYGVVSSA------RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 115
Query: 307 XXXXGWCH------EKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR--YKILTGVAS 358
E + +V D M L + ++ +S+ +TL Y++L G
Sbjct: 116 IAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIH-SSQPLTLEHVRYFLYQLLRG--- 170
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG--LVGVP 416
L+ + +V+HRDLK SN+L++ + ++GDFG+AR + S AEH +
Sbjct: 171 ----LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL---CTSPAEHQYFMTEYV 223
Query: 417 GTMGYVAPECFHT-GKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQQHAYTLV 468
T Y APE + + T D++ G + E++ R PG HQ +V
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV 278
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 164
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 165 IXDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 450 CGR 452
R
Sbjct: 223 SNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 164
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 165 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 450 CGR 452
R
Sbjct: 223 SNR 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 138 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 189
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 190 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 164
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 165 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 450 CGR 452
R
Sbjct: 223 SNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 168
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 169 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 450 CGR 452
R
Sbjct: 227 SNR 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD--FLAELAI 297
++ M LG G +G+V K HV + QI K R ++ S+ L +L I
Sbjct: 6 ADDLEPIMELGRGAYGVVEK-------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI 58
Query: 298 -IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQ-VTLNWNHRYKILTG 355
+ G +G + + + M + SL+K+ ++ T+ + KI
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+ A+ +L ++ V+HRD+K SN+L++A ++ DFG++ + ++ +
Sbjct: 118 IVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID------ 169
Query: 416 PGTMGYVAPECFHTGKATPE---------SDVFGFGAVVLEVVCGRSP 454
G Y+APE + PE SD++ G ++E+ R P
Sbjct: 170 AGCKPYMAPE-----RINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLK 168
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 169 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 450 CGR 452
R
Sbjct: 227 SNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 164
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 165 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 450 CGR 452
R
Sbjct: 223 SNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 166
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 167 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 450 CGR 452
R
Sbjct: 225 SNR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 137 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV- 188
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 189 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 113 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 169
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 170 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 450 CGR 452
R
Sbjct: 228 SNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 114 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 170
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 171 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 450 CGR 452
R
Sbjct: 229 SNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 105 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 161
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 162 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 450 CGR 452
R
Sbjct: 220 SNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 169 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 450 CGR 452
R
Sbjct: 227 SNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 128 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 184
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 185 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 450 CGR 452
R
Sbjct: 243 SNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 106 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 162
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 163 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 450 CGR 452
R
Sbjct: 221 SNR 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 33/235 (14%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR--DSIKSKGDFLAELAIIXXXXXXXX 306
+G G +G+V + + Q+A+KK D + + L EL I+
Sbjct: 63 IGNGAYGVVSSA------RRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 116
Query: 307 XXXXGWCH------EKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHR--YKILTGVAS 358
E + +V D M L + ++ +S+ +TL Y++L G
Sbjct: 117 IAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIH-SSQPLTLEHVRYFLYQLLRG--- 171
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHG--LVGVP 416
L+ + +V+HRDLK SN+L++ + ++GDFG+AR + S AEH +
Sbjct: 172 ----LKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL---CTSPAEHQYFMTEYV 224
Query: 417 GTMGYVAPECFHT-GKATPESDVFGFGAVVLEVVCGRS--PGNMIPHQQHAYTLV 468
T Y APE + + T D++ G + E++ R PG HQ +V
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV 279
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 137 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV- 188
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 189 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 231
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 106 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 162
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 163 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 450 CGR 452
R
Sbjct: 221 SNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 169 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 450 CGR 452
R
Sbjct: 227 SNR 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 138 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 189
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 190 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 137 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 188
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 189 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 178
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
+ G T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 179 --MAGFVATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 144 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 195
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 196 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 238
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 143 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYV- 194
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 195 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 139 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 190
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 191 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 233
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 116 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 172
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 173 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
Query: 450 CGR 452
R
Sbjct: 231 SNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 108 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 164
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 165 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 450 CGR 452
R
Sbjct: 223 SNR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 138 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 189
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 190 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 166
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 167 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 450 CGR 452
R
Sbjct: 225 SNR 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 178
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
+ G T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 179 --MAGFVATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 128 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 179
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 180 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 144 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 195
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 196 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 134 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 185
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 186 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 144 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 195
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 196 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 129 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 180
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 181 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 112 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 169 ICDFGLARVADPDHDHTG--FLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 450 CGR 452
R
Sbjct: 227 SNR 229
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 178
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
+ G T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 179 --MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 113 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 169
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 170 ICDFGLARVADPDHDHTG--FLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 450 CGR 452
R
Sbjct: 228 SNR 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 137 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 188
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 189 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 134 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 185
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 186 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 131 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 182
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 183 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 155 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 206
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 207 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 249
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 129 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 180
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 181 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 152 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 203
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 204 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 246
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 142 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 193
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 194 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 236
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 134 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 185
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 186 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 128 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 179
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 180 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 152 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 203
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 204 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 151 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 202
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 203 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 245
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 128 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 179
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 180 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E
Sbjct: 128 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 174
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
+ G T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 175 --MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 143 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 194
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 195 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 237
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 130 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 181
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRS--PGN 456
T Y APE ++ D++ G ++ E++ GR+ PG
Sbjct: 182 -------ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 138 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV- 189
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 190 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 151 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 202
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 203 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 245
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 11 ISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHF--VAIEFDTVKQGFDPDD- 67
+ GL F + P S P Q G F + + N + +A+EFDT +DP
Sbjct: 86 LPADGLVFFMGPTKSKP-----AQGYGYLGVFNNSKQDNSYQTLAVEFDTFSNPWDPPQV 140
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K P + L +G V ++YD SK++ V +
Sbjct: 141 PHIGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYT- 193
Query: 128 LLKETINLKDYLKPESYFGFSASTG 152
+ E +++K L G S +TG
Sbjct: 194 -IAEIVDVKQVLPDWVDVGLSGATG 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 134 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYV- 185
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 186 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 228
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 13 GHGLAFVIAPND-SFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV----KQGFDPDD 67
G+AF IAP D + P S G AN +A+EFDT +DP+
Sbjct: 85 ADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFYAQDSNTWDPNY 144
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K V DG S V V ++ ++ + V T +
Sbjct: 145 PHIGIDVNSIRSVKTVKWDRR------DGQSLNVLVTFNPSTRNLDVVATYSDGTRYE-- 196
Query: 128 LLKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQTKKEK 177
+ ++++ L GFSA++G + Q + + SW+ ++ T ++K
Sbjct: 197 -VSYEVDVRSVLPEWVRVGFSAASGEQY-QTHTLESWSFTSTLLYTAQKK 244
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 112 METDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLK 168
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 169 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 450 CGR 452
R
Sbjct: 227 SNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + V+HRDLK SN+LL+ + ++ DFGLAR + + +
Sbjct: 151 YQILRG-------LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG- 202
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGR 452
L T Y APE K +S D++ G ++ E++ R
Sbjct: 203 -FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 15/170 (8%)
Query: 13 GHGLAFVIAPND-SFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV----KQGFDPDD 67
G+AF IAP D + P S G AN +A+EFDT +DP+
Sbjct: 85 ADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFYAQDSNTWDPNY 144
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K V DG S V V ++ ++ + V T +
Sbjct: 145 PHIGIDVNSIRSVKTVKWDRR------DGQSLNVLVTFNPSTRNLDVVATYSDGTRYE-- 196
Query: 128 LLKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQTKKEK 177
+ ++++ L GFSA++G + Q + + SW+ ++ T ++K
Sbjct: 197 -VSYEVDVRSVLPEWVRVGFSAASGEQY-QTHTLESWSFTSTLLYTAQKK 244
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNAR 390
+E LY + L+ +H L + + Y+ + V+HRDLK SN+LL+ + +
Sbjct: 110 METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLK 166
Query: 391 LGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVV 449
+ DFGLAR + + + L T Y APE K +S D++ G ++ E++
Sbjct: 167 ICDFGLARVADPDHDHTG--FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 450 CGR 452
R
Sbjct: 225 SNR 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E
Sbjct: 161 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 207
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
+ G T Y APE H D++ G ++ E++ GR+ PG
Sbjct: 208 --MTGYVATRWYRAPEIMLNWMHYNMTV---DIWSVGCIMAELLTGRTLFPGT 255
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E Y
Sbjct: 155 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV- 206
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 207 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 249
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR ++E
Sbjct: 152 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------ 198
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
+ G T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 199 --MXGXVATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 246
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDAD---FNARLGDFGLARAIENERNSYA 408
I+ + S + YL + +VHRD+K NILL+ N ++ DFGL+
Sbjct: 151 IMKQILSGICYL---HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS------K 201
Query: 409 EHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
++ L GT Y+APE K + DV+ G ++ ++CG P
Sbjct: 202 DYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 228 PREFKYKE-LKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIK 286
P +++Y+E + AT+ +RLG G FG V H + Q AVKK + +
Sbjct: 83 PVDYEYREEVHWATHQ----LRLGRGSFGEV------HRMEDKQTGFQCAVKKVRLEVFR 132
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNW 346
++ EL G E + + + + GSL + + EQ L
Sbjct: 133 AE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE 184
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDAD-FNARLGDFGLARAIENERN 405
+ L + YL + ++++H D+KA N+LL +D +A L DFG A ++ +
Sbjct: 185 DRALYYLGQALEGLEYL---HSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP--D 239
Query: 406 SYAEHGLVG--VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ L G +PGT ++APE + DV+ ++L ++ G P
Sbjct: 240 GLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR +E Y
Sbjct: 139 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV- 190
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 191 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR +E Y
Sbjct: 139 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV- 190
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 191 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGLAR +E Y
Sbjct: 139 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV- 190
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 191 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 228 PREFKYKE-LKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIK 286
P +++Y+E + AT+ +RLG G FG V H + Q AVKK + +
Sbjct: 64 PVDYEYREEVHWATHQ----LRLGRGSFGEV------HRMEDKQTGFQCAVKKVRLEVFR 113
Query: 287 SKGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNW 346
++ EL G E + + + + GSL + + EQ L
Sbjct: 114 AE-----ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV---KEQGCLPE 165
Query: 347 NHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDAD-FNARLGDFGLARAIENERN 405
+ L + YL + ++++H D+KA N+LL +D +A L DFG A ++ +
Sbjct: 166 DRALYYLGQALEGLEYL---HSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP--D 220
Query: 406 SYAEHGLVG--VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ L G +PGT ++APE + DV+ ++L ++ G P
Sbjct: 221 GLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
H K LL++ + M G L + +Q +I+ + +A+ +L + + H
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTAIQFL---HSHNIAH 132
Query: 374 RDLKASNILL---DADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
RD+K N+L + D +L DFG A+ ++ L T YVAPE
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAKET-------TQNALQTPCYTPYYVAPEVLGPE 185
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
K D++ G ++ ++CG P
Sbjct: 186 KYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
H K LL++ + M G L + +Q +I+ + +A+ +L + + H
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQERGDQA-FTEREAAEIMRDIGTAIQFL---HSHNIAH 151
Query: 374 RDLKASNILL---DADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
RD+K N+L + D +L DFG A+ ++ L T YVAPE
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAKET-------TQNALQTPCYTPYYVAPEVLGPE 204
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
K D++ G ++ ++CG P
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 5 PRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHF--VAIEFDTVKQG 62
P PA GL F + P S P + G +LG+ F + + N + + +EFDT
Sbjct: 85 PLPA-----DGLVFFMGPTKSKPAQG--GGYLGI---FNNSKQDNSYQTLGVEFDTFSNQ 134
Query: 63 FDPDD-NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGE 121
+DP H+G+++NS+ S K P + L +G V ++YD SK++ +
Sbjct: 135 WDPPQVPHIGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDASSKILHAVLVYPSS 188
Query: 122 TMPQKPLLKETINLKDYLKPESYFGFSASTGYPH--IQLNCVRSWTLDIDVIQT 173
+ E +++K L G S +TG + + V SW+ + +T
Sbjct: 189 GAIYT--IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQASLPET 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ D+GLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 11 ISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFDPDD-NH 69
+ GL F + P S P + YG +LG+ N N + + +EFDT +DP H
Sbjct: 86 LPADGLVFFMGPTKSKPAQG-YG-YLGIFNQSKQDN-SYQTLGVEFDTFSNPWDPPQVPH 142
Query: 70 LGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLL 129
+G+++NS+ S K P + L +G V ++YD SKL+ + +
Sbjct: 143 IGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDASSKLLHAVLVYPSSGAIYT--I 194
Query: 130 KETINLKDYLKPESYFGFSASTG 152
E +++K L G S +TG
Sbjct: 195 AEIVDVKQVLPEWVDVGLSGATG 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 96/259 (37%), Gaps = 30/259 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK--------GDFLAELAIIXX 300
LG G FG V+ + N ++ VK ++ + G E+AI+
Sbjct: 32 LGSGAFGFVWTAVDKEK------NKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 301 XXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
+G LV + +GS L+ I + SAV
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMG 420
YL+ + ++HRD+K NI++ DF +L DFG A +E + Y GT+
Sbjct: 144 GYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT------FCGTIE 194
Query: 421 YVAPECFHTGKAT-PESDVFGFGAVVLEVVCGRSP----GNMIPHQQHAYTLVDWVWMLH 475
Y APE PE +++ G + +V +P + H LV M
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSL 254
Query: 476 REGHIQDAVDQRLNINSVV 494
G +Q ++R + +V
Sbjct: 255 VSGLLQPVPERRTTLEKLV 273
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 16 LAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG--FDPDDNHLGLN 73
L F IA D+ P S G+ LGL + + N V++EFDT DP+ H+G++
Sbjct: 88 LTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVSVEFDTYPNTDIGDPNYRHIGID 147
Query: 74 INSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLKETI 133
+NS+ R K ++ +G + T + Y+ SK + V + ++ +
Sbjct: 148 VNSI--RSKAASKWDWQ----NGKTATAHISYNSASKRLSVVSSYPNSS---PVVVSFDV 198
Query: 134 NLKDYLKPESYFGFSASTGYPHIQLNCVRSWTL 166
L + GFSA+TG + Q N + +W+
Sbjct: 199 ELNNVXPXWVRVGFSATTG-QYTQTNNILAWSF 230
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC---- 426
++HRDLK SN+ ++ D R+ DFGLAR + E Y T Y APE
Sbjct: 144 IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV--------ATRWYRAPEIMLNW 195
Query: 427 FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
H + D++ G ++ E++ G++ PG+
Sbjct: 196 MHYNQTV---DIWSVGCIMAELLQGKALFPGS 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DFGL R ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 316 KGKLLLVYDFMPNGS---LEKYLYGTSEQVT--LNWNHRYKILTGVASAVYYLQNEYDQK 370
K +L LV + GS + K++ E + L+ + IL V + YL +
Sbjct: 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL---HKNG 141
Query: 371 VVHRDLKASNILLDADFNARLGDFG----LARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
+HRD+KA NILL D + ++ DFG LA + RN VG P ++APE
Sbjct: 142 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK-VRKTFVGTP---CWMAPEV 197
Query: 427 FHTGKATP-ESDVFGFGAVVLEVVCGRSPGNMIP 459
+ ++D++ FG +E+ G +P + P
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 243 FHESMRLGEGGFGIVYKGIIHHNDQY-HVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXX 301
F+ES LG+G F ++KG+ Y + T++ +K + F +++
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 302 XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
G C + +LV +F+ GSL+ YL + + W + ++ +A A++
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMH 127
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGY 421
+L+ + ++H ++ A NILL + + + G+ + + + S + + +
Sbjct: 128 FLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIK-LSDPGISITVLPKDILQERIPW 183
Query: 422 VAPECFHTGK-ATPESDVFGFGAVVLEVVCG 451
V PEC K +D + FG + E+ G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC---- 426
++HRDLK SN+ ++ D R+ DFGLAR + E Y T Y APE
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV--------ATRWYRAPEIMLNW 203
Query: 427 FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
H + D++ G ++ E++ G++ PG+
Sbjct: 204 MHYNQTV---DIWSVGCIMAELLQGKALFPGS 232
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 11 ISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHF--VAIEFDTVKQGFDPDD- 67
+ GL F + P S P + YG +LG+ F + + N + + +EFDT +DP
Sbjct: 86 LPADGLVFFMGPTKSKPAQG-YG-YLGI---FNNSKQDNSYQTLGVEFDTFSNQWDPPQV 140
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K P + L +G V ++YD SKL+ +
Sbjct: 141 PHIGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDASSKLLHAVLVYPSSGAIYT- 193
Query: 128 LLKETINLKDYLKPESYFGFSASTG 152
+ E +++K L G S +TG
Sbjct: 194 -IAEIVDVKQVLPEWVDVGLSGATG 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 33/225 (14%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIX 299
++ + +LG G +G V ++ + + +KK S + + G L E+A++
Sbjct: 20 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 300 XXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL--EKYLYGTSEQVTLNWNHRYKILTGVA 357
+ +K LV + G L E L +V I+ V
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMKQVL 131
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIE-----NERNSYAE 409
S YL + +VHRDLK N+LL++ D ++ DFGL+ E ER
Sbjct: 132 SGTTYL---HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----- 183
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y+APE K + DV+ G ++ ++CG P
Sbjct: 184 ------LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 316 KGKLLLVYDFMPNGS---LEKYLYGTSEQVT--LNWNHRYKILTGVASAVYYLQNEYDQK 370
K +L LV + GS + K++ E + L+ + IL V + YL
Sbjct: 80 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ-- 137
Query: 371 VVHRDLKASNILLDADFNARLGDFG----LARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
+HRD+KA NILL D + ++ DFG LA + RN VG P ++APE
Sbjct: 138 -IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK-VRKTFVGTP---CWMAPEV 192
Query: 427 FHTGKATP-ESDVFGFGAVVLEVVCGRSPGNMIP 459
+ ++D++ FG +E+ G +P + P
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 317 GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDL 376
GKL L+ +++ G L ++ E + + + L ++ A+ +L + + +++RDL
Sbjct: 94 GKLYLILEYLSGGEL--FMQLEREGIFMEDTACF-YLAEISMALGHL---HQKGIIYRDL 147
Query: 377 KASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES 436
K NI+L+ + +L DFGL + E+ + H GT+ Y+APE
Sbjct: 148 KPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFC---GTIEYMAPEILMRSGHNRAV 202
Query: 437 DVFGFGAVVLEVVCGRSP 454
D + GA++ +++ G P
Sbjct: 203 DWWSLGALMYDMLTGAPP 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC---- 426
++HRDLK SN+ ++ D R+ DFGLAR + E Y T Y APE
Sbjct: 152 IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV--------ATRWYRAPEIMLNW 203
Query: 427 FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
H + D++ G ++ E++ G++ PG+
Sbjct: 204 MHYNQTV---DIWSVGCIMAELLQGKALFPGS 232
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 317 GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDL 376
GKL L+ +++ G L ++ E + + + L ++ A+ +L + + +++RDL
Sbjct: 94 GKLYLILEYLSGGEL--FMQLEREGIFMEDTACF-YLAEISMALGHL---HQKGIIYRDL 147
Query: 377 KASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPES 436
K NI+L+ + +L DFGL + E+ + H GT+ Y+APE
Sbjct: 148 KPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFC---GTIEYMAPEILMRSGHNRAV 202
Query: 437 DVFGFGAVVLEVVCGRSP 454
D + GA++ +++ G P
Sbjct: 203 DWWSLGALMYDMLTGAPP 220
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 11 ISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHF--VAIEFDTVKQGFDPDD- 67
+ GL F + P S P Q G F + + N + +A+EFDT +DP
Sbjct: 86 LPADGLVFFMGPTKSKP-----AQGYGYLGVFNNSKQDNSYQTLAVEFDTFSNPWDPPQV 140
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K P + L +G V ++YD SK++ +
Sbjct: 141 PHIGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDASSKILLAVLVYPSSGAIYT- 193
Query: 128 LLKETINLKDYLKPESYFGFSASTGYPH--IQLNCVRSWTLDIDVIQT 173
+ E +++K L G S +TG + + V SW+ + +T
Sbjct: 194 -IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFHASLPET 240
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 11 ISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHF--VAIEFDTVKQGFDPDD- 67
+ GL F + P S P + YG +LG+ F + + N + + +EFDT +DP
Sbjct: 86 LPADGLVFFMGPTKSKPAQG-YG-YLGI---FNNSKQDNSYQTLGVEFDTFSNPWDPPQV 140
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K P + L +G V ++YD SK++ +
Sbjct: 141 PHIGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDASSKILHAVLVYPSSGAIYT- 193
Query: 128 LLKETINLKDYLKPESYFGFSASTGYPH--IQLNCVRSWTLDIDVIQTK 174
+ E +++K L G S +TG + + V SW+ + +T
Sbjct: 194 -IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSWSFQASLPETN 241
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK--GDFLAELAIIXXXXXXXX 306
LG+G FG V K + + + AVK ++ S K+K L E+ ++
Sbjct: 30 LGKGSFGEVLKC------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
+ +V + G L + ++ + + +I+ V S + Y+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYM--- 137
Query: 367 YDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ +VHRDLK NILL++ D + ++ DFGL+ ++N+ + + GT Y+A
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI----GTAYYIA 191
Query: 424 PECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
PE G + DV+ G ++ ++ G P
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 12 SGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG-FDPDDNHL 70
S G+AF + P S P +S +LG+ ++ N A VA+EFDT +DP H+
Sbjct: 83 SADGIAFALVPVGSEPKSNS--GFLGVFDSDVYDNSA-QTVAVEFDTFSNTDWDPTSRHI 139
Query: 71 GLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLK 130
G+++NS+ S + L++G + + + Y+ + L+ + ++
Sbjct: 140 GIDVNSIKSIRTASWG------LANGQNAEILITYNAATSLLVASLVHPSRRTSY--IVS 191
Query: 131 ETINLKDYLKPESYFGFSASTGYP--HIQLNCVRSWTL 166
E +++ + L GFSA+TG + + + V SW+
Sbjct: 192 ERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSF 229
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDSIKSKGDFLAELAII 298
T+ + LG+G F +V + + Q + I KK S RD K + E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARDHQKLE----REARIC 57
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVAS 358
E+G LV+D + G L + + + +H +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH------CIQQ 111
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARAIENERNSYAEHGLVGV 415
+ + + + +VHRDLK N+LL + +L DFGLA ++ ++ ++ G
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW-----FGF 166
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT GY++PE D++ G ++ ++ G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK--GDFLAELAIIXXXXXXXX 306
LG+G FG V K + + + AVK ++ S K+K L E+ ++
Sbjct: 30 LGKGSFGEVLKC------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
+ +V + G L + ++ + + +I+ V S + Y+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYM--- 137
Query: 367 YDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ +VHRDLK NILL++ D + ++ DFGL+ ++N+ + + GT Y+A
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI----GTAYYIA 191
Query: 424 PECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
PE G + DV+ G ++ ++ G P
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSK--GDFLAELAIIXXXXXXXX 306
LG+G FG V K + + + AVK ++ S K+K L E+ ++
Sbjct: 30 LGKGSFGEVLKC------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
+ +V + G L + ++ + + +I+ V S + Y+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEII---KRKRFSEHDAARIIKQVFSGITYM--- 137
Query: 367 YDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVA 423
+ +VHRDLK NILL++ D + ++ DFGL+ ++N+ + + GT Y+A
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI----GTAYYIA 191
Query: 424 PECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
PE G + DV+ G ++ ++ G P
Sbjct: 192 PEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 101/250 (40%), Gaps = 47/250 (18%)
Query: 214 EPHHNLGKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNT 273
+P +NL +++L +F+ M LG+G FG V ++ +
Sbjct: 8 QPSNNLDRVKL----------------TDFNFLMVLGKGSFGKVMLADRKGTEELY---- 47
Query: 274 QIAVKKFSRDSIKSKGDF---LAELAIIXXXXXXXXXXXXGWCHEK-GKLLLVYDFMPNG 329
A+K +D + D + E ++ C + +L V +++ G
Sbjct: 48 --AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGG 105
Query: 330 SLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA 389
L +Y + ++ +++L + + +++RDLK N++LD++ +
Sbjct: 106 DL---MYHIQQVGKFKEPQAVFYAAEISIGLFFL---HKRGIIYRDLKLDNVMLDSEGHI 159
Query: 390 RLGDFGLARAIENERNSYAEHGLVGVP-----GTMGYVAPECFHTGKATPESDVFGFGAV 444
++ DFG+ + EH + GV GT Y+APE D + +G +
Sbjct: 160 KIADFGMCK----------EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 445 VLEVVCGRSP 454
+ E++ G+ P
Sbjct: 210 LYEMLAGQPP 219
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 11 ISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHF--VAIEFDTVKQGFDPDD- 67
+ GL F + P S P + YG +LG+ F + + N + + +EFDT +DP
Sbjct: 86 LPADGLVFFMGPTKSKPAQG-YG-YLGI---FNNSKQDNSYQTLGVEFDTFSNPWDPPQV 140
Query: 68 NHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKP 127
H+G+++NS+ S K P + L +G V ++YD SK++ +
Sbjct: 141 PHIGIDVNSIRSIKTQPFQ------LDNGQVANVVIKYDASSKILHAVLVYPSSGAIYT- 193
Query: 128 LLKETINLKDYLKPESYFGFSASTG 152
+ E +++K L G S +TG
Sbjct: 194 -IAEIVDVKQVLPEWVDVGLSGATG 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 20/219 (9%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS-RDSIKSKGDFLAELAII 298
T+ + LG+G F +V + + Q + I KK S RD K + E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARDHQKLE----REARIC 57
Query: 299 XXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVAS 358
E+G LV+D + G L + + + +H +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH------CIQQ 111
Query: 359 AVYYLQNEYDQKVVHRDLKASNILLDADFNA---RLGDFGLARAIENERNSYAEHGLVGV 415
+ + + + +VHRDLK N+LL + +L DFGLA ++ ++ ++ G
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW-----FGF 166
Query: 416 PGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT GY++PE D++ G ++ ++ G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 61/148 (41%), Gaps = 16/148 (10%)
Query: 314 HEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVH 373
++ L LV ++ G L L E++ Y +A V + + + VH
Sbjct: 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY-----LAEIVMAIDSVHRLGYVH 185
Query: 374 RDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHT---- 429
RD+K NILLD + RL DFG + R LV V GT Y++PE
Sbjct: 186 RDIKPDNILLDRCGHIRLADFGSCLKL---RADGTVRSLVAV-GTPDYLSPEILQAVGGG 241
Query: 430 ---GKATPESDVFGFGAVVLEVVCGRSP 454
G PE D + G E+ G++P
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ FGLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 34/220 (15%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSR----------DSIKSKGDFLAELAII 298
LG+GGFG V+ G D Q+A+K R DS+ + +
Sbjct: 39 LGKGGFGTVFAG------HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 299 XXXXXXXXXXXXGWCH-EKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVA 357
W ++G +L++ +P L Y+ +E+ L V
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI---TEKGPLGEGPSRCFFGQVV 149
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADFN-ARLGDFGLARAIENERNSYAEHGLVGVP 416
+A+ Q+ + + VVHRD+K NIL+D A+L DFG + +E + +
Sbjct: 150 AAI---QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD------- 199
Query: 417 GTMGYVAPECF--HTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y PE H A P + V+ G ++ ++VCG P
Sbjct: 200 GTRVYSPPEWISRHQYHALPAT-VWSLGILLYDMVCGDIP 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 33/225 (14%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIX 299
++ + +LG G +G V ++ + + +KK S + + G L E+A++
Sbjct: 3 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 300 XXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSL--EKYLYGTSEQVTLNWNHRYKILTGVA 357
+ +K LV + G L E L +V I+ V
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMKQVL 114
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDA---DFNARLGDFGLARAIE-----NERNSYAE 409
S YL + +VHRDLK N+LL++ D ++ DFGL+ E ER
Sbjct: 115 SGTTYL---HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER----- 166
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
GT Y+APE K + DV+ G ++ ++CG P
Sbjct: 167 ------LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ DF LAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYK------GIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
LG G F IV K G+ + ++ + + SR+ I+ E++I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER------EVSILRQVL 73
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYY 362
+ ++L+ + + G L +L +++ +L+ + + V Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 363 LQNEYDQKVVHRDLKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGT 418
L + +K+ H DLK NI LLD + + +L DFGLA IE+ + GT
Sbjct: 131 L---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE------FKNIFGT 181
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVVAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMKV-- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P SLE++ +Y S+ + + +H
Sbjct: 80 ----------VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLVGI-------KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG---GVLFPGTDH 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 20/212 (9%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIK--SKGDFLAELAIIXXXXXXXX 306
LG G F IV K + + K+ SR S + S+ + E++I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYA--AKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 307 XXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNE 366
+ ++L+ + + G L +L +++ +L+ + + V YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYL--- 131
Query: 367 YDQKVVHRDLKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGTMGYV 422
+ +K+ H DLK NI LLD + + +L DFGLA IE+ + GT +V
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE------FKNIFGTPEFV 185
Query: 423 APECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
APE + E+D++ G + ++ G SP
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYK------GIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
LG G F IV K G+ + ++ + + SR+ I+ E++I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER------EVSILRQVL 73
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYY 362
+ ++L+ + + G L +L +++ +L+ + + V Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 363 LQNEYDQKVVHRDLKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGT 418
L + +K+ H DLK NI LLD + + +L DFGLA IE+ + GT
Sbjct: 131 L---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE------FKNIFGT 181
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 61/228 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVPG--TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGR 452
A + P T Y APE D++ G ++ E+VC +
Sbjct: 176 -AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 44/274 (16%)
Query: 247 MRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFS---RDSIKSKGDFLAELA---IIXX 300
+ +G G F VYKG+ V ++ +K + R K + + L L I+
Sbjct: 32 IEIGRGSFKTVYKGL-DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 301 XXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYG---TSEQVTLNWNHRYKILTGVA 357
C ++LV + +G+L+ YL +V +W +IL G+
Sbjct: 91 YDSWESTVKGKKC-----IVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR--QILKGLQ 143
Query: 358 SAVYYLQNEYDQKVVHRDLKASNILLDADF-NARLGDFGLARAIENERNSYAEHGLVGVP 416
+L ++HRDLK NI + + ++GD GLA +R S+A+ V
Sbjct: 144 ----FLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAK----AVI 191
Query: 417 GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV-------- 468
GT + APE + K DV+ FG LE P + + Y V
Sbjct: 192 GTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPAS 250
Query: 469 -DWVWMLHR----EGHIQDAVDQRLNINSVVDEA 497
D V + EG I+ D+R +I +++ A
Sbjct: 251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ D GLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMKV-- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P SLE++ +Y S+ + + +H
Sbjct: 80 ----------VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLVGI-------KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG---GVLFPGTDH 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 22/215 (10%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G G +G VYKG HV Q+A K + + + E+ ++
Sbjct: 32 VGNGTYGQVYKG-------RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84
Query: 309 XXGWCHEK-------GKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVY 361
K +L LV +F GS+ + T TL I + +
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLS 143
Query: 362 YLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGY 421
+L + KV+HRD+K N+LL + +L DFG++ + +R + +G P M
Sbjct: 144 HL---HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAP 198
Query: 422 VAPECFHTGKATPE--SDVFGFGAVVLEVVCGRSP 454
C AT + SD++ G +E+ G P
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMKV-- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P SLE++ +Y S+ + + +H
Sbjct: 80 ----------VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLVGI-------KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDT----VKQGFDPDDNHL 70
GLAF +AP +S P S GL ++ +D +N +A+EFDT +DPD H+
Sbjct: 87 GLAFFLAPANSQIPSGSSAGMFGLFSS-SDSKSSNQIIAVEFDTYFGKAYNPWDPDFKHI 145
Query: 71 GLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREGETMPQKPLLK 130
G+++NS+ S K V D N ++D V + Y +K + V + + ++
Sbjct: 146 GIDVNSIKSIKTVKW-DWRNGEVAD-----VVITYRAPTKSLTVCLSYPSDGTSN--IIT 197
Query: 131 ETINLKDYLKPESYFGFSASTG-YPHIQLNCVRSW 164
+++LK L GFS G + + V SW
Sbjct: 198 ASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSW 232
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ D GLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYK------GIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
LG G F IV K G+ + ++ + + SR+ I+ E++I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER------EVSILRQVL 73
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYY 362
+ ++L+ + + G L +L +++ +L+ + + V Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 363 LQNEYDQKVVHRDLKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGT 418
L + +K+ H DLK NI LLD + + +L DFGLA IE+ + GT
Sbjct: 131 L---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE------FKNIFGT 181
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
+ +VVHRDLK NIL+ + +L DFGLAR + L V T+ Y APE
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS------FQMALTSVVVTLWYRAPEV 190
Query: 427 -FHTGKATPESDVFGFGAVVLEV 448
+ ATP D++ G + E+
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEM 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 61/228 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 26 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 72
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 73 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 123
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 124 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 169
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGR 452
A + P T Y APE D++ G ++ E+VC +
Sbjct: 170 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 61/228 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 37 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 83
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 84 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 134
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 135 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 180
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGR 452
A + P T Y APE D++ G ++ E+VC +
Sbjct: 181 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYK------GIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXX 302
LG G F IV K G+ + ++ + + SR+ I+ E++I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER------EVSILRQVL 73
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYY 362
+ ++L+ + + G L +L +++ +L+ + + V Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 363 LQNEYDQKVVHRDLKASNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGT 418
L + +K+ H DLK NI LLD + + +L DFGLA IE+ + GT
Sbjct: 131 L---HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE------FKNIFGT 181
Query: 419 MGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+VAPE + E+D++ G + ++ G SP
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC-FHT 429
++HRDLK N+ ++ D ++ DFGLAR ++E + G T Y APE +
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------MXGXVVTRWYRAPEVILNW 200
Query: 430 GKATPESDVFGFGAVVLEVVCGRS 453
+ T D++ G ++ E++ G++
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 134 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 189
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPG-TMGYVAPECFHTGKATP 434
N+L + NA +L DFG A+ H + P T YVAPE K
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKET-------TSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 243 SCDMWSLGVIMYILLCGYPP 262
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 56/235 (23%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 34 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 80
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSE----------QVTLNWNHRY 350
+ K + L+ F P SLE++ +Y E Q+ L+
Sbjct: 81 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 131
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEH 410
+L + + +L + ++HRDLK SNI++ +D ++ DFGLAR A
Sbjct: 132 YLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGT 180
Query: 411 GLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
+ VP T Y APE D++ G ++ E++ G G + P H
Sbjct: 181 SFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 232
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
+ +VVHRDLK NIL+ + +L DFGLAR + L V T+ Y APE
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS------FQMALTSVVVTLWYRAPEV 190
Query: 427 -FHTGKATPESDVFGFGAVVLEV 448
+ ATP D++ G + E+
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEM 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P SLE++ +Y S+ + + +H
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMKV-- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P SLE++ +Y S+ + + +H
Sbjct: 80 ----------VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 140 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 195
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPG-TMGYVAPECFHTGKATP 434
N+L + NA +L DFG A+ H + P T YVAPE K
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAKET-------TSHNSLTTPCYTPYYVAPEVLGPEKYDK 248
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 249 SCDMWSLGVIMYILLCGYPP 268
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 145
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 200 CDMWSLGVIMYILLCGYPP 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 367 YDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPEC 426
+ +VVHRDLK NIL+ + +L DFGLAR + L V T+ Y APE
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS------FQMALTSVVVTLWYRAPEV 190
Query: 427 -FHTGKATPESDVFGFGAVVLEV 448
+ ATP D++ G + E+
Sbjct: 191 LLQSSYATP-VDLWSVGCIFAEM 212
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 95 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 150
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 204
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 205 CDMWSLGVIMYILLCGYPP 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P SLE++ +Y S+ + + +H
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 94 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 149
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 203
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 204 CDMWSLGVIMYILLCGYPP 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y+IL G L+ + ++HRDLK SN+ ++ D ++ D GLAR ++E Y
Sbjct: 132 YQILRG-------LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYV- 183
Query: 410 HGLVGVPGTMGYVAPEC----FHTGKATPESDVFGFGAVVLEVVCGRS--PGN 456
T Y APE H + D++ G ++ E++ GR+ PG
Sbjct: 184 -------ATRWYRAPEIMLNWMHYNQTV---DIWSVGCIMAELLTGRTLFPGT 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 53/224 (23%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSE----------QVTLNWNHRY 350
+ K + L+ F P SLE++ +Y E Q+ L+
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEH 410
+L + + +L + ++HRDLK SNI++ +D ++ DFGLAR A
Sbjct: 130 YLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGT 178
Query: 411 GLVGVPG--TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGR 452
+ P T Y APE D++ G ++ E+VC +
Sbjct: 179 SFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 96 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 151
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 205
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 206 CDMWSLGVIMYILLCGYPP 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 143
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 197
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 198 CDMWSLGVIMYILLCGYPP 216
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 90 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 145
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPG-TMGYVAPECFHTGKATP 434
N+L + NA +L DFG A+ H + P T YVAPE K
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKET-------TSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 89 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 144
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 145 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 198
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 199 CDMWSLGVIMYILLCGYPP 217
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 113/284 (39%), Gaps = 35/284 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G F +V + I Q + V KF+ S D E +I
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKI-VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 309 XXGWCHEKGKLLLVYDFMPNGSL---------EKYLYGTSEQVTLNWNHRYKILTGVASA 359
G L +V++FM L ++Y SE V ++ + + A
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY--SEAVASHY------MRQILEA 142
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNA---RLGDFGLARAIENERNSYAEHGLV--G 414
+ Y +D ++HRD+K +LL + N+ +LG FG+A + E GLV G
Sbjct: 143 LRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-------GESGLVAGG 192
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWML 474
GT ++APE DV+G G ++ ++ G P + + M
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 252
Query: 475 HRE-GHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK 517
R+ HI ++ + ++D A+R+ + A +HP ER +
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYE-ALNHPWLKERDR 295
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
++L+ + + G L +L +++ +L+ + + V YL + +K+ H DLK
Sbjct: 90 VVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYL---HTKKIAHFDLKP 143
Query: 379 SNI-LLDADF---NARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATP 434
NI LLD + + +L DFGLA IE+ + GT +VAPE +
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE------FKNIFGTPEFVAPEIVNYEPLGL 197
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
E+D++ G + ++ G SP
Sbjct: 198 EADMWSIGVITYILLSGASP 217
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 143
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 198 CDMWSLGVIMYILLCGYPP 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 369 QKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFH 428
QK++HRD+K SN+L+ D + ++ DFG++ + ++ L GT ++APE
Sbjct: 156 QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG-----SDALLSNTVGTPAFMAPESLS 210
Query: 429 ------TGKATPESDVFGFGAVVLEVVCGRSP 454
+GKA DV+ G + V G+ P
Sbjct: 211 ETRKIFSGKAL---DVWAMGVTLYCFVFGQCP 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I+ + A+ YL + + HRD+K
Sbjct: 104 LLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL---HSINIAHRDVKP 159
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPE 435
N+L + NA +L DFG A+ + + + L T YVAPE K
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAK------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKS 213
Query: 436 SDVFGFGAVVLEVVCGRSP 454
D++ G ++ ++CG P
Sbjct: 214 CDMWSLGVIMYILLCGYPP 232
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 113/284 (39%), Gaps = 35/284 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
+G+G F +V + I Q + V KF+ S D E +I
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKI-VDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 309 XXGWCHEKGKLLLVYDFMPNGSL---------EKYLYGTSEQVTLNWNHRYKILTGVASA 359
G L +V++FM L ++Y SE V ++ + + A
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVY--SEAVASHY------MRQILEA 144
Query: 360 VYYLQNEYDQKVVHRDLKASNILLDADFNA---RLGDFGLARAIENERNSYAEHGLV--G 414
+ Y +D ++HRD+K +LL + N+ +LG FG+A + E GLV G
Sbjct: 145 LRYC---HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-------GESGLVAGG 194
Query: 415 VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLVDWVWML 474
GT ++APE DV+G G ++ ++ G P + + M
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMN 254
Query: 475 HRE-GHIQDAVDQRLNINSVVDEAKRLLLLGLACSHPIASERPK 517
R+ HI ++ + ++D A+R+ + A +HP ER +
Sbjct: 255 PRQWSHISESAKDLVRRMLMLDPAERITVYE-ALNHPWLKERDR 297
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVPG--TMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
++HRDLK +N LL+ D + ++ DFGLAR I +E+++
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
VVHRDLK N+ ++ D ++ DFGLAR +A+ + G T Y APE +
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRWYRAPEVILSW 198
Query: 431 KATPES-DVFGFGAVVLEVVCGRS 453
++ D++ G ++ E++ G++
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ D +K + VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQV 114
+++NS+ S K L +G V + ++G + ++ V
Sbjct: 139 IDVNSIKSINTKSWK------LQNGKEANVVIAFNGATNVLTV 175
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VHRDLK NIL+ + +L DFGLAR SY + L V T+ Y APE
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIY-----SY-QMALTPVVVTLWYRAPEVLLQS 194
Query: 431 KATPESDVFGFGAVVLE------VVCGRSPGNMI 458
D++ G + E + CG S + +
Sbjct: 195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 228
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VHRDLK NIL+ + +L DFGLAR SY + L V T+ Y APE
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY-----SY-QMALAPVVVTLWYRAPEVLLQS 186
Query: 431 KATPESDVFGFGAVVLE------VVCGRSPGNMI 458
D++ G + E + CG S + +
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
VVHRDLK N+ ++ D ++ DFGLAR +A+ + G T Y APE +
Sbjct: 165 VVHRDLKPGNLAVNEDCELKILDFGLAR--------HADAEMTGYVVTRWYRAPEVILSW 216
Query: 431 KATPES-DVFGFGAVVLEVVCGRS 453
++ D++ G ++ E++ G++
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VHRDLK NIL+ + +L DFGLAR SY + L V T+ Y APE
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY-----SY-QMALFPVVVTLWYRAPEVLLQS 186
Query: 431 KATPESDVFGFGAVVLE------VVCGRSPGNMI 458
D++ G + E + CG S + +
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 79 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 230
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 97/239 (40%), Gaps = 64/239 (26%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y I+ N +A+KK SR + +K + EL ++
Sbjct: 33 IGSGAQGIVCAAYDAILERN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P SLE++ +Y E + + +H
Sbjct: 80 ---------CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 131 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 176
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQH 463
A + P T Y APE D++ G ++ E++ G G + P H
Sbjct: 177 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG---GVLFPGTDH 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 30/232 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 54
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFM-PNGSLEKYLYGTSEQVTL 344
E+ ++ W +L+ + M P L ++ +E+ L
Sbjct: 55 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI---TERGAL 111
Query: 345 NWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENE 403
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 112 QEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD- 167
Query: 404 RNSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 168 -TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L LV D+ +GSL YL + T+ K+ AS + +L E +
Sbjct: 114 QLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP----GTMGYVAPECFH 428
HRDLK+ NIL+ + + D GLA R+ A + P GT Y+APE
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 224
Query: 429 TG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ G V E+ S G + Q Y
Sbjct: 225 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L LV D+ +GSL YL + T+ K+ AS + +L E +
Sbjct: 75 QLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP----GTMGYVAPECFH 428
HRDLK+ NIL+ + + D GLA R+ A + P GT Y+APE
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 185
Query: 429 TG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ G V E+ S G + Q Y
Sbjct: 186 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L LV D+ +GSL YL + T+ K+ AS + +L E +
Sbjct: 101 QLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 156
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP----GTMGYVAPECFH 428
HRDLK+ NIL+ + + D GLA R+ A + P GT Y+APE
Sbjct: 157 HRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 211
Query: 429 TG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ G V E+ S G + Q Y
Sbjct: 212 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 254
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L LV D+ +GSL YL + T+ K+ AS + +L E +
Sbjct: 76 QLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 131
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP----GTMGYVAPECFH 428
HRDLK+ NIL+ + + D GLA R+ A + P GT Y+APE
Sbjct: 132 HRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 186
Query: 429 TG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ G V E+ S G + Q Y
Sbjct: 187 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 229
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L LV D+ +GSL YL + T+ K+ AS + +L E +
Sbjct: 81 QLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 136
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP----GTMGYVAPECFH 428
HRDLK+ NIL+ + + D GLA R+ A + P GT Y+APE
Sbjct: 137 HRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 191
Query: 429 TG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ G V E+ S G + Q Y
Sbjct: 192 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 234
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 318 KLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEY-----DQKVV 372
+L LV D+ +GSL YL + T+ K+ AS + +L E +
Sbjct: 78 QLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 133
Query: 373 HRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVP----GTMGYVAPECFH 428
HRDLK+ NIL+ + + D GLA R+ A + P GT Y+APE
Sbjct: 134 HRDLKSKNILVKKNGTCCIADLGLA-----VRHDSATDTIDIAPNHRVGTKRYMAPEVLD 188
Query: 429 TG------KATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAY 465
++ +D++ G V E+ S G + Q Y
Sbjct: 189 DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXX------- 301
LG GG G+V+ + + D+ ++A+KK +S L E+ II
Sbjct: 19 LGCGGNGLVFSAVDNDCDK------RVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 302 -------XXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILT 354
G E + +V ++M E L EQ L H +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARLFMY 127
Query: 355 GVASAVYYLQNEYDQKVVHRDLKASNILLDA-DFNARLGDFGLARAIE--NERNSYAEHG 411
+ + Y+ + V+HRDLK +N+ ++ D ++GDFGLAR ++ + G
Sbjct: 128 QLLRGLKYI---HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 412 LVGVPGTMGYVAPECFHT-GKATPESDVFGFGAVVLEVVCGRS 453
LV T Y +P + T D++ G + E++ G++
Sbjct: 185 LV----TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ D +K + VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQV 114
+++NS+ K++ K + L +G V + ++G + ++ V
Sbjct: 139 IDVNSI---KSINTK---SWALQNGKEANVVIAFNGATNVLTV 175
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG T+ Y+ PE
Sbjct: 148 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---TVNYMPPEAIKDM 203
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLA R +
Sbjct: 133 YQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTACTN 179
Query: 410 HGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
+ T Y APE D++ G ++ E+V G
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGL 412
++HRDLK +N LL+ D + ++ DFGLAR I ++++ + + L
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 331 LEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILL-DADFNA 389
LE+ + + L+ + +++ + +A+ Y + Q VVH+DLK NIL D ++
Sbjct: 108 LERIVSAQARGKALSEGYVAELMKQMMNALAYF---HSQHVVHKDLKPENILFQDTSPHS 164
Query: 390 --RLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLE 447
++ DFGLA +++ +S GT Y+APE F T + D++ G V+
Sbjct: 165 PIKIIDFGLAELFKSDEHS------TNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYF 217
Query: 448 VVCGRSP 454
++ G P
Sbjct: 218 LLTGCLP 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 29/159 (18%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDA-------------DFNARLGDFGLAR 398
+L +AS V +L + K++HRDLK NIL+ + + DFGL +
Sbjct: 120 LLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTG-------KATPESDVFGFGAVVLEVVC- 450
+++ ++S+ + L GT G+ APE + T D+F G V ++
Sbjct: 177 KLDSGQSSFRTN-LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 451 GRSP-GNMIPHQQHAYTLV---DWVWMLHREGHIQDAVD 485
G+ P G+ + + + D + LH I +A D
Sbjct: 236 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD 274
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VHRDLK NIL+ + +L DFGLAR SY + L V T+ Y APE
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIY-----SY-QMALDPVVVTLWYRAPEVLLQS 186
Query: 431 KATPESDVFGFGAVVLE------VVCGRSPGNMI 458
D++ G + E + CG S + +
Sbjct: 187 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG T+ Y+ PE
Sbjct: 132 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---TVNYMPPEAIKDM 187
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 229
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR A
Sbjct: 131 YQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AS 175
Query: 410 HGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCG 451
+ P T Y APE D++ G ++ E+V G
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 15/140 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
LL+V + + G L + +Q +I + A+ YL + + HRD+K
Sbjct: 134 LLIVXECLDGGELFSRIQDRGDQA-FTEREASEIXKSIGEAIQYL---HSINIAHRDVKP 189
Query: 379 SNILLDADF-NA--RLGDFGLARAIENERNSYAEHGLVGVPG-TMGYVAPECFHTGKATP 434
N+L + NA +L DFG A+ H + P T YVAPE K
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKET-------TSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 435 ESDVFGFGAVVLEVVCGRSP 454
D + G + ++CG P
Sbjct: 243 SCDXWSLGVIXYILLCGYPP 262
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG T+ Y+ PE
Sbjct: 129 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---TVNYMPPEAIKDM 184
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDA-------------DFNARLGDFGLAR 398
+L +AS V +L + K++HRDLK NIL+ + + DFGL +
Sbjct: 138 LLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTG---KATPESDVFGFGAVVLEVVC-GRSP 454
+++ + + L GT G+ APE + T D+F G V ++ G+ P
Sbjct: 195 KLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 455 -GNMIPHQQHAYTLV---DWVWMLHREGHIQDAVD 485
G+ + + + D + LH I +A D
Sbjct: 254 FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD 288
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG T+ Y+ PE
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---TVNYMPPEAIKDM 231
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG T+ Y+ PE
Sbjct: 128 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---TVNYMPPEAIKDM 183
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 225
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 25/155 (16%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDA-------------DFNARLGDFGLAR 398
+L +AS V +L + K++HRDLK NIL+ + + DFGL +
Sbjct: 138 LLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTG---KATPESDVFGFGAVVLEVVC-GRSP 454
+++ + + L GT G+ APE + T D+F G V ++ G+ P
Sbjct: 195 KLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 455 -GNMIPHQQHAYTLV---DWVWMLHREGHIQDAVD 485
G+ + + + D + LH I +A D
Sbjct: 254 FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD 288
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 26 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 69
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 70 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 124
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 182 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 454 -PGN 456
PG+
Sbjct: 235 FPGD 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 22 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 65
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 66 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 120
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 121 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 177
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 178 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
Query: 454 -PGN 456
PG+
Sbjct: 231 FPGD 234
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 57
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 58 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 170 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 454 -PGN 456
PG+
Sbjct: 223 FPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 33 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 76
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 77 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 131
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 132 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 188
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 189 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
Query: 454 -PGN 456
PG+
Sbjct: 242 FPGD 245
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 57
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 58 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHY 112
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 170 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 454 -PGN 456
PG+
Sbjct: 223 FPGD 226
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 26 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 69
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 70 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 124
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 125 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 181
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 182 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 454 -PGN 456
PG+
Sbjct: 235 FPGD 238
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 181
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ D +K + VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQV 114
+++NS+ S K L +G V + ++ + ++ V
Sbjct: 139 IDVNSIKSINTKSWK------LQNGKEANVVIAFNAATNVLTV 175
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG T+ Y+ PE
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---TVNYMPPEAIKDM 231
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 15 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 58
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 59 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 113
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 114 SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 170
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 171 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
Query: 454 -PGN 456
PG+
Sbjct: 224 FPGD 227
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 19 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 62
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 63 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 117
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 118 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 174
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 175 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 227
Query: 454 -PGN 456
PG+
Sbjct: 228 FPGD 231
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 57
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 58 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 170 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 454 -PGN 456
PG+
Sbjct: 223 FPGD 226
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 27 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 70
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 71 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 125
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 126 SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 182
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 183 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235
Query: 454 -PGN 456
PG+
Sbjct: 236 FPGD 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 48 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 91
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 92 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 146
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 204 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 454 -PGN 456
PG+
Sbjct: 257 FPGD 260
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 57
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 58 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 112
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 113 SRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 169
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 170 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 454 -PGN 456
PG+
Sbjct: 223 FPGD 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 27/223 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFLAELAIIXXXXXXXXXX 308
LGEG F I K + + N AVK S+ + + L +
Sbjct: 19 LGEGSFSICRKCV------HKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 309 XXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYD 368
H++ LV + + G L + + ++ + I+ + SAV ++ +D
Sbjct: 73 EVF--HDQLHTFLVMELLNGGELFERI---KKKKHFSETEASYIMRKLVSAVSHM---HD 124
Query: 369 QKVVHRDLKASNILL---DADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPE 425
VVHRDLK N+L + + ++ DFG AR + L T+ Y APE
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-----LKTPCFTLHYAAPE 179
Query: 426 CFHTGKATPESDVFGFGAVVLEVVCGRSPGNMIPHQQHAYTLV 468
+ D++ G ++ ++ G+ +P Q H +L
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQ-----VPFQSHDRSLT 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILL---DADFNARLGDFGLARAIENERNSY 407
+I+ V SAV Y + V HRDLK N L D +L DFGLA + +
Sbjct: 127 RIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ VG P YV+P+ G PE D + G ++ ++CG P
Sbjct: 184 TK---VGTP---YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 25/230 (10%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS 287
P +++Y+E + RLG G FG V H + Q AVKK + +
Sbjct: 62 PVDYEYRE---EVHWMTHQPRLGRGSFGEV------HRMKDKQTGFQCAVKKVRLEVFR- 111
Query: 288 KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWN 347
+ EL G E + + + + GSL + + +
Sbjct: 112 ----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK------QMGCL 161
Query: 348 HRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFN-ARLGDFGLARAIENERNS 406
+ L + A+ L+ + ++++H D+KA N+LL +D + A L DFG A ++ +
Sbjct: 162 PEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP--DG 219
Query: 407 YAEHGLVG--VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ L G +PGT ++APE + D++ ++L ++ G P
Sbjct: 220 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 351 KILTGVASAVYYLQNEYDQKVVHRDLKASNILL---DADFNARLGDFGLARAIENERNSY 407
+I+ V SAV Y + V HRDLK N L D +L DFGLA + +
Sbjct: 110 RIMKDVLSAVAYC---HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ VG P YV+P+ G PE D + G ++ ++CG P
Sbjct: 167 TK---VGTP---YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 42 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 85
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 86 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 140
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 141 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 197
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 198 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 250
Query: 454 -PGN 456
PG+
Sbjct: 251 FPGD 254
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 18 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 61
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 62 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 116
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 117 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 173
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 174 AKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
Query: 454 -PGN 456
PG+
Sbjct: 227 FPGD 230
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 52 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 95
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 96 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 150
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 151 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 207
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 208 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260
Query: 454 -PGN 456
PG+
Sbjct: 261 FPGD 264
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 48 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 91
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 92 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 146
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 147 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 204 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 454 -PGN 456
PG+
Sbjct: 257 FPGD 260
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|A Chain A, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|C Chain C, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|A Chain A, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|A Chain A, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|C Chain C, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 181
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ D +K + VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-KDYDKTSQTVAVEFDTFYNTAWDPSNGDRHIG 138
Query: 72 LNINSVVS 79
+++NS+ S
Sbjct: 139 IDVNSIKS 146
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 50 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 93
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 94 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 148
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 149 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 205
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 206 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258
Query: 454 -PGN 456
PG+
Sbjct: 259 FPGD 262
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK +D
Sbjct: 93 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKVLQDK 136
Query: 285 -IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYG 337
K++ EL I+ + + G+ L LV D++P +
Sbjct: 137 RFKNR-----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHY 191
Query: 338 TSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGL 396
+ + TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG
Sbjct: 192 SRAKQTLPVIYVKLYMYQLFRSLAYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGS 248
Query: 397 ARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS- 453
A+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 249 AKQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 301
Query: 454 -PGN 456
PG+
Sbjct: 302 FPGD 305
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 89/218 (40%), Gaps = 47/218 (21%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLMKX-- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQVTLNWNHRYKILTGVASAV 360
+ K + L+ F P +LE++ +Y E + N ++
Sbjct: 80 ----------VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 361 YYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
Y L ++ + ++HRDLK SNI++ +D ++ DFGLAR A +
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--------AGTSFM 181
Query: 414 GVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
P T Y APE D++ G ++ E+V
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 47/218 (21%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 77
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQVTLNWNHRYKILTGVASAV 360
+ K + L+ F P +LE++ +Y E + N ++
Sbjct: 78 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 361 YYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
Y L ++ + ++HRDLK SNI++ +D ++ DFGLAR A +
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--------AGTSFM 181
Query: 414 GVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
P T Y APE D++ G ++ E+V
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 54
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 55 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 112
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 113 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 167
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 168 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 78
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 79 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 131 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 176
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 177 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L +V ++MP G + +L + H + YL + +++RDLK
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGR---FSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKP 169
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDV 438
N+L+D ++ DFG A+ ++ L G P Y+APE + D
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTP---EYLAPEIILSKGYNKAVDW 221
Query: 439 FGFGAVVLEVVCGRSP 454
+ G ++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 76
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 77 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 128
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 129 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 174
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 175 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 77
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 78 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 55
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 56 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 113
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 114 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 168
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 169 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Query: 319 LLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKA 378
L +V ++MP G + +L + H + YL + +++RDLK
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGR---FSEPHARFYAAQIVLTFEYL---HSLDLIYRDLKP 169
Query: 379 SNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTGKATPESDV 438
N+L+D ++ DFG A+ ++ L G P Y+APE + D
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTP---EYLAPEIILSKGYNKAVDW 221
Query: 439 FGFGAVVLEVVCGRSP 454
+ G ++ E+ G P
Sbjct: 222 WALGVLIYEMAAGYPP 237
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 47/218 (21%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 70
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQVTLNWNHRYKILTGVASAV 360
+ K + L+ F P +LE++ +Y E + N ++
Sbjct: 71 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 122
Query: 361 YYL-------QNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLV 413
Y L ++ + ++HRDLK SNI++ +D ++ DFGLAR A +
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--------AGTSFM 174
Query: 414 GVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
P T Y APE D++ G ++ E+V
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 77
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 78 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ A L G P Y+APE +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTLCGTP---EYLAPEIILSK 234
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 80 ---------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 130
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 131 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 176
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 177 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 71
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 72 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 124 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 169
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 170 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 55
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 56 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 113
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 114 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 168
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 169 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 70
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 71 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 122
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 123 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 168
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 169 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLM---- 71
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 72 --------KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 123
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 124 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 169
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 170 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 116
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 117 ---------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 168 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 213
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 214 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex
pdb|1OFS|C Chain C, Pea Lectin-sucrose Complex
Length = 187
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ + +K VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-AEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQV 114
+++NS+ S K L +G V + ++ + ++ V
Sbjct: 139 IDVNSIKSVNTKSWK------LQNGEEANVVIAFNAATNVLTV 175
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 127
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 128 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 182
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 183 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 69
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 127
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 128 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 182
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 183 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 77
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 78 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 135
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 136 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 190
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 191 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 128
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 129 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 183
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 184 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLMK--- 116
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LY--------GTSEQVTLNWNHR--- 349
+ K + L+ F P +LE++ +Y + + + +H
Sbjct: 117 ---------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 167
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 168 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------- 213
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 214 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 128
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 129 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 183
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 184 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 61/225 (27%)
Query: 249 LGEGGFGIV---YKGIIHHNDQYHVDNTQIAVKKFSR---DSIKSKGDFLAELAIIXXXX 302
+G G GIV Y ++ N +A+KK SR + +K + EL ++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---------VAIKKLSRPFQNQTHAKRAY-RELVLMKX-- 79
Query: 303 XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKY--LYGTSEQ--------VTLNWNHR--- 349
+ K + L+ F P +LE++ +Y E + + +H
Sbjct: 80 ----------VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS 129
Query: 350 ---YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNS 406
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR
Sbjct: 130 YLLYQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART------- 175
Query: 407 YAEHGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
A + P T Y APE D++ G ++ E+V
Sbjct: 176 -AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 89
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 147
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 148 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 202
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 203 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 70
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 128
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 129 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 183
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 184 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 141
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 142 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 196
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 197 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 140
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 141 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 195
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 196 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|C Chain C, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1BQP|A Chain A, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|C Chain C, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1HKD|A Chain A, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|C Chain C, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 181
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ + +K VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-AEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQV 114
+++NS+ S K L +G V + ++ + ++ V
Sbjct: 139 IDVNSIKSVNTKSWK------LQNGEEANVVIAFNAATNVLTV 175
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y++L G+ ++ + ++HRDLK SNI++ +D ++ DFGLAR A
Sbjct: 133 YQMLCGI-------KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART--------AG 177
Query: 410 HGLVGVP--GTMGYVAPECFHTGKATPESDVFGFGAVVLEVV 449
+ P T Y APE D++ G ++ E+V
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ A GT Y+APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA--------GTPEYLAPEIILSK 213
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 55
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 56 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 113
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 114 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 168
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 169 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|C Chain C, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 180
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 15 GLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTV-KQGFDPD--DNHLG 71
G F IAP D+ P G +LG+ N+ + +K VA+EFDT +DP D H+G
Sbjct: 82 GFTFFIAPVDTKPQTG--GGYLGVFNS-AEYDKTTETVAVEFDTFYNAAWDPSNRDRHIG 138
Query: 72 LNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQV 114
+++NS+ S K L +G V + ++ + ++ V
Sbjct: 139 IDVNSIKSVNTKSWK------LQNGEEANVVIAFNAATNVLTV 175
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + + VG T+ Y+ PE
Sbjct: 148 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVG---TVNYMPPEAIKDM 203
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 141
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 142 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 196
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 197 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 140
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 141 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 195
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 196 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 25/230 (10%)
Query: 228 PREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKS 287
P +++Y+E + R+G G FG V H + Q AVKK + +
Sbjct: 48 PVDYEYRE---EVHWMTHQPRVGRGSFGEV------HRMKDKQTGFQCAVKKVRLEVFR- 97
Query: 288 KGDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWN 347
+ EL G E + + + + GSL + + +
Sbjct: 98 ----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK------QMGCL 147
Query: 348 HRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFN-ARLGDFGLARAIENERNS 406
+ L + A+ L+ + ++++H D+KA N+LL +D + A L DFG A ++ +
Sbjct: 148 PEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP--DG 205
Query: 407 YAEHGLVG--VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
+ L G +PGT ++APE + D++ ++L ++ G P
Sbjct: 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 155
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 156 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 210
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 211 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 99/249 (39%), Gaps = 53/249 (21%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKV---- 53
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYGT 338
++ K EL I+ + + G+ L LV D++P T
Sbjct: 54 LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP---------AT 104
Query: 339 SEQVTLNWNHRYKILTGVASAVYYLQ------NEYDQKVVHRDLKASNILLDADFNA-RL 391
+V +++ + L + +Y Q + + HRD+K N+LLD D +L
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
Query: 392 GDFGLARA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVV 449
DFG A+ + E N V + Y APE F T DV+ G V+ E++
Sbjct: 165 CDFGSAKQLVRGEPN-------VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 450 CGRS--PGN 456
G+ PG+
Sbjct: 218 LGQPIFPGD 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 141
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 142 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 196
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 197 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 140
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 141 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 195
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 196 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 359 AVYYLQNEYD-------QKVVHRDLKASNILLDADFN-ARLGDFGLARAIENERNSYAEH 410
A+YYL + ++++H D+KA N+LL +D + A L DFG A ++ + +
Sbjct: 168 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP--DGLGKS 225
Query: 411 GLVG--VPGTMGYVAPECFHTGKATPESDVFGFGAVVLEVVCGRSP 454
L G +PGT ++APE + D++ ++L ++ G P
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 82
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 140
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 141 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 195
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 196 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 83
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 141
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 142 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 196
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 197 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ + GT Y+APE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--------TWXLCGTPEYLAPEIILSK 214
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 102
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 103 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 160
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 161 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 215
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 216 TVYTDFD-----GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ L G P Y+APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTP---EYLAPEIILSK 213
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKV---- 53
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYGT 338
++ K EL I+ + + G+ L LV D++P + +
Sbjct: 54 LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 339 SEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLA 397
+ TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG A
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 398 RA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS-- 453
+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 171 KQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 454 PGN 456
PG+
Sbjct: 224 PGD 226
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFL------AELAIIXXXX 302
LG GGFG VY GI DN +A+K +D I G+ E+ ++
Sbjct: 12 LGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 303 X--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
W +L+ + P + + + T E+ L V AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAV 123
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADF-NARLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+ N V+HRD+K NIL+D + +L DFG +++ Y + GT
Sbjct: 124 RHCHN---XGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFD-----GTR 173
Query: 420 GYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y PE + S V+ G ++ ++VCG P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 225 PGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDS 284
P P+E Y + K +G G FG+VY+ + + + +A+KK
Sbjct: 14 PDRPQEVSYTDTKV----------IGNGSFGVVYQAKLCDSGEL------VAIKKV---- 53
Query: 285 IKSKGDFLAELAIIXXXXXXXXXXXXGWCHEKGK------LLLVYDFMPNGSLEKYLYGT 338
++ K EL I+ + + G+ L LV D++P + +
Sbjct: 54 LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113
Query: 339 SEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLA 397
+ TL + + + ++ Y+ + + HRD+K N+LLD D +L DFG A
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 170
Query: 398 RA-IENERNSYAEHGLVGVPGTMGYVAPE-CFHTGKATPESDVFGFGAVVLEVVCGRS-- 453
+ + E N V + Y APE F T DV+ G V+ E++ G+
Sbjct: 171 KQLVRGEPN-------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
Query: 454 PGN 456
PG+
Sbjct: 224 PGD 226
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 16/175 (9%)
Query: 4 DPRPAWDISGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQG- 62
+P+ A D GL F +AP DS P G + GL N T + + VA+EFDT+
Sbjct: 81 NPKAATD----GLTFFLAPPDS--PLRRAGGYFGLFND-TKCDSSYQTVAVEFDTIGSPV 133
Query: 63 --FDPDDNHLGLNINSVVSRKNVPLKDNYNITLSDGTSYTVWVQYDGKSKLIQVFMDREG 120
+DP H+G+++N V S + +N V + Y+ SK + +
Sbjct: 134 NFWDPGFPHIGIDVNCVKSIN----AERWNKRYGLNNVANVEIIYEASSKTLTASLTYPS 189
Query: 121 ETMPQKPLLKETINLKDYLKPESYFGFSASTGYPHIQLNCVRSWTLDIDVIQTKK 175
+ + ++LK+ L GFS ST + V +W I T
Sbjct: 190 DQTSIS--VTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTSTFINTNS 242
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 29/159 (18%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDA-------------DFNARLGDFGLAR 398
+L +AS V +L + K++HRDLK NIL+ + + DFGL +
Sbjct: 120 LLRQIASGVAHL---HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 399 AIENERNSYAEHGLVGVPGTMGYVAPECFHTG-------KATPESDVFGFGAVVLEVVC- 450
+++ + + L GT G+ APE + T D+F G V ++
Sbjct: 177 KLDSGQXXF-RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 451 GRSP-GNMIPHQQHAYTLV---DWVWMLHREGHIQDAVD 485
G+ P G+ + + + D + LH I +A D
Sbjct: 236 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD 274
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ + GT Y+APE +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC--------GTPEYLAPEIILSK 199
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 28/231 (12%)
Query: 234 KELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDF-- 291
KE + + + LG GGFG VY GI DN +A+K +D I G+
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPN 97
Query: 292 ----LAELAIIXXXXX--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLN 345
E+ ++ W +L+ + P + + + T E+ L
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQ 155
Query: 346 WNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENER 404
V AV + N V+HRD+K NIL+D + +L DFG +++
Sbjct: 156 EELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-- 210
Query: 405 NSYAEHGLVGVPGTMGYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y + GT Y PE + S V+ G ++ ++VCG P
Sbjct: 211 TVYTD-----FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+++D ++ DFGLA+ ++ L G P Y+APE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT-----WXLCGTP---EYLAPEIILSK 213
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 93/241 (38%), Gaps = 30/241 (12%)
Query: 220 GKLRLPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKK 279
G L+ P + F + +K ++ E +G G FG VY N + +A+KK
Sbjct: 36 GSLKDPDVAELFFKDDPEKLFSDLRE---IGHGSFGAVYFARDVRNSEV------VAIKK 86
Query: 280 FSRDSIKSK---GDFLAELAIIXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLY 336
S +S D + E+ + G + LV ++ GS L
Sbjct: 87 MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLL- 144
Query: 337 GTSEQVTLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGL 396
+ L + G + YL + ++HRD+KA NILL +LGDFG
Sbjct: 145 -EVHKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 397 ARAIENERNSYAEHGLVGVPGTMGYVAPE---CFHTGKATPESDVFGFGAVVLEVVCGRS 453
A +I N + GT ++APE G+ + DV+ G +E+ +
Sbjct: 201 A-SIMAPANXFV--------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
Query: 454 P 454
P
Sbjct: 252 P 252
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+VH DLK +N L+ D +L DFG+A ++ + S + VG + Y+ PE
Sbjct: 176 IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG---AVNYMPPEAIKDM 231
Query: 431 KATPES-----------DVFGFGAVVLEVVCGRSPGNMIPHQ 461
++ E+ DV+ G ++ + G++P I +Q
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 224 LPGMPREFKYKELKKATNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRD 283
LPG K++++ K T+ LGEG + V + N + + AVK +
Sbjct: 6 LPG-----KFEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGK------EYAVKIIEKQ 49
Query: 284 SIKSKGDFLAELAIIXXXX-XXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQV 342
+ S+ E+ + + + + LV++ + GS+ L +Q
Sbjct: 50 AGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI---LAHIQKQK 106
Query: 343 TLNWNHRYKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFN---ARLGDFGLARA 399
N +++ VA+A+ +L + + + HRDLK NIL ++ ++ DF L
Sbjct: 107 HFNEREASRVVRDVAAALDFL---HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSG 163
Query: 400 IE--NERNSYAEHGLVGVPGTMGYVAPECFH--TGKAT---PESDVFGFGAVVLEVVCGR 452
++ N L G+ Y+APE T +AT D++ G V+ ++ G
Sbjct: 164 MKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGY 223
Query: 453 SP 454
P
Sbjct: 224 PP 225
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ + + GT Y+APE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT--------LCGTPEYLAPEIILSK 214
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 350 YKILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAE 409
Y +L GV + ++HRDLK +N L++ D + ++ DFGLAR ++ Y E
Sbjct: 163 YNLLVGVKYV-------HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD-----YPE 210
Query: 410 HGLVGVP 416
+G +P
Sbjct: 211 NGNSQLP 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+++D ++ DFGLA+ ++ L G P Y+APE +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT-----WXLCGTP---EYLAPEIILSK 213
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFL------AELAIIXXXX 302
LG GGFG VY GI DN +A+K +D I G+ E+ ++
Sbjct: 12 LGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 303 X--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
W +L+ + P + + + T E+ L V AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAV 123
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADF-NARLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+ N V+HRD+K NIL+D + +L DFG +++ Y + GT
Sbjct: 124 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFD-----GTR 173
Query: 420 GYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y PE + S V+ G ++ ++VCG P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFL------AELAIIXXXX 302
LG GGFG VY GI DN +A+K +D I G+ E+ ++
Sbjct: 15 LGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 303 X--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
W +L+ + P + + + T E+ L V AV
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAV 126
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+ N V+HRD+K NIL+D + +L DFG +++ Y + GT
Sbjct: 127 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFD-----GTR 176
Query: 420 GYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y PE + S V+ G ++ ++VCG P
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 30/168 (17%)
Query: 12 SGHGLAFVIAPNDSFPPESSYGQWLGLTNAFTDGNKANHFVAIEFDTVKQGFDPDDNHLG 71
S +GLAF + P S P G++LGL N T+ ++ H VA+ FDTV N +
Sbjct: 81 SAYGLAFALVPVGSRPKLK--GRYLGLFNT-TNYDRDAHTVAVVFDTVS-------NRIE 130
Query: 72 LNINSVVSRKNVPL-KDNYNITLSDGTSYTVWVQYDGKSKLIQVFM-----DREGETMPQ 125
+++NS+ P+ ++ N ++G V + YD ++V + + +
Sbjct: 131 IDVNSI-----RPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLLYPSSEEKCHVSAT 185
Query: 126 KPLLKETINLKDYLKPESYFGFSASTGYPH--IQLNCVRSWTLDIDVI 171
PL KE ++D++ GFSA++G + + V SW+ + I
Sbjct: 186 VPLEKE---VEDWVS----VGFSATSGSKKETTETHNVLSWSFSSNFI 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 240 TNNFHESMRLGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGD--FLAELAI 297
++ LG G +G+V K HV + QI K R ++ S+ L +L I
Sbjct: 33 ADDLEPIXELGRGAYGVVEK-------XRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDI 85
Query: 298 -IXXXXXXXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQ-VTLNWNHRYKILTG 355
G +G + + + + + SL+K+ ++ T+ + KI
Sbjct: 86 SXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVS 144
Query: 356 VASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGV 415
+ A+ +L ++ V+HRD+K SN+L++A + DFG++ + ++ +
Sbjct: 145 IVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID------ 196
Query: 416 PGTMGYVAPECFHTGKATPE---------SDVFGFGAVVLEVVCGRSPGNM--IPHQQ 462
G Y APE + PE SD++ G +E+ R P + P QQ
Sbjct: 197 AGCKPYXAPE-----RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ 249
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 28/216 (12%)
Query: 249 LGEGGFGIVYKGIIHHNDQYHVDNTQIAVKKFSRDSIKSKGDFL------AELAIIXXXX 302
LG GGFG VY GI DN +A+K +D I G+ E+ ++
Sbjct: 12 LGSGGFGSVYSGI------RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 303 X--XXXXXXXGWCHEKGKLLLVYDFMPNGSLEKYLYGTSEQVTLNWNHRYKILTGVASAV 360
W +L+ + P + + + T E+ L V AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILE-RPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAV 123
Query: 361 YYLQNEYDQKVVHRDLKASNILLDADFNA-RLGDFGLARAIENERNSYAEHGLVGVPGTM 419
+ N V+HRD+K NIL+D + +L DFG +++ Y + GT
Sbjct: 124 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFD-----GTR 173
Query: 420 GYVAPECFHTGKATPES-DVFGFGAVVLEVVCGRSP 454
Y PE + S V+ G ++ ++VCG P
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 352 ILTGVASAVYYLQNEYDQKVVHRDLKASNILLDADFNARLGDFGLARA----IENERNSY 407
+L G+ L+ + + HRDLK +NILL + L D G +E R +
Sbjct: 139 LLLGICRG---LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 408 AEHGLVGVPGTMGYVAPECFHTGKAT---PESDVFGFGAVVLEVVCGRSPGNMI 458
T+ Y APE F +DV+ G V+ ++ G P +M+
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ + GT Y+APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--------TWXLXGTPEYLAPEIILSK 213
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 371 VVHRDLKASNILLDADFNARLGDFGLARAIENERNSYAEHGLVGVPGTMGYVAPECFHTG 430
+++RDLK N+L+D ++ DFG A+ ++ L G P Y+APE +
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLCGTP---EYLAPEIILSK 200
Query: 431 KATPESDVFGFGAVVLEVVCGRSP 454
D + G ++ E+ G P
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPP 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,882,010
Number of Sequences: 62578
Number of extensions: 757450
Number of successful extensions: 3642
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 1677
Number of HSP's gapped (non-prelim): 1222
length of query: 568
length of database: 14,973,337
effective HSP length: 104
effective length of query: 464
effective length of database: 8,465,225
effective search space: 3927864400
effective search space used: 3927864400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)