Query 008383
Match_columns 567
No_of_seqs 276 out of 1476
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 00:54:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008383.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008383hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rl5_A Metallophosphoesterase 99.8 1.4E-18 4.9E-23 177.2 16.4 205 3-236 59-278 (296)
2 2yvt_A Hypothetical protein AQ 99.7 5.6E-16 1.9E-20 154.0 21.0 205 3-235 5-241 (260)
3 1uf3_A Hypothetical protein TT 99.7 1.7E-16 5.9E-21 153.9 16.7 196 1-234 1-208 (228)
4 1y23_A HIT, histidine triad pr 99.6 7.7E-16 2.6E-20 141.2 6.2 101 388-489 4-111 (145)
5 3n1s_A HIT-like protein HINT; 99.6 1.8E-15 6.1E-20 134.3 7.7 98 389-487 3-108 (119)
6 3lb5_A HIT-like protein involv 99.6 3.7E-15 1.3E-19 139.2 10.0 103 387-489 26-134 (161)
7 3o0m_A HIT family protein; ssg 99.6 2.5E-15 8.6E-20 138.6 8.4 102 388-489 4-112 (149)
8 3imi_A HIT family protein; str 99.6 2.5E-15 8.6E-20 138.2 7.9 103 386-489 6-115 (147)
9 2oik_A Histidine triad (HIT) p 99.6 1.4E-14 4.8E-19 134.2 12.2 98 388-489 9-107 (154)
10 3p0t_A Uncharacterized protein 99.6 6.4E-15 2.2E-19 134.0 9.4 100 389-489 5-106 (138)
11 4egu_A Histidine triad (HIT) p 99.6 4.8E-15 1.7E-19 131.3 7.4 100 388-487 3-109 (119)
12 3oj7_A Putative histidine tria 99.5 3.2E-15 1.1E-19 132.1 5.7 100 388-487 5-110 (117)
13 3ano_A AP-4-A phosphorylase; d 99.5 5.9E-15 2E-19 144.1 7.3 103 388-490 68-178 (218)
14 3l7x_A SMU.412C, putative HIT- 99.5 6.3E-15 2.1E-19 139.1 7.1 103 387-489 34-142 (173)
15 2eo4_A 150AA long hypothetical 99.5 4.9E-15 1.7E-19 136.5 6.2 98 391-489 1-105 (149)
16 3r6f_A HIT family protein; str 99.5 1.5E-15 5.1E-20 137.8 2.1 100 388-489 5-104 (135)
17 3o1c_A Histidine triad nucleot 99.5 8.3E-15 2.8E-19 131.2 5.5 99 387-486 13-118 (126)
18 1xqu_A HIT family hydrolase; p 99.5 1.1E-14 3.8E-19 133.8 5.1 100 388-487 34-140 (147)
19 3ksv_A Uncharacterized protein 99.5 2.6E-14 8.8E-19 131.8 7.1 101 388-489 10-117 (149)
20 3d03_A Phosphohydrolase; glyce 99.4 1.3E-11 4.4E-16 122.9 19.9 201 4-234 1-217 (274)
21 1fit_A FragIle histidine prote 99.3 2.3E-12 7.8E-17 118.3 8.5 90 400-489 10-105 (147)
22 3ib7_A ICC protein; metallopho 99.3 5.2E-11 1.8E-15 121.9 18.2 201 3-234 25-240 (330)
23 1ems_A Nitfhit, NIT-fragIle hi 99.2 9.5E-12 3.3E-16 134.0 8.4 100 388-489 296-401 (440)
24 3ohe_A Histidine triad (HIT) p 99.2 1.4E-11 4.9E-16 111.7 8.0 89 401-489 11-100 (137)
25 3i24_A HIT family hydrolase; s 99.2 4.1E-11 1.4E-15 110.2 10.1 89 401-489 11-100 (149)
26 3ck2_A Conserved uncharacteriz 99.1 8.8E-10 3E-14 103.5 13.4 132 1-235 4-135 (176)
27 1s3l_A Hypothetical protein MJ 99.0 4E-09 1.4E-13 100.7 16.3 65 3-78 25-89 (190)
28 1nnw_A Hypothetical protein; s 99.0 1.8E-09 6.2E-14 106.7 14.1 188 4-236 2-198 (252)
29 1z84_A Galactose-1-phosphate u 99.0 5.6E-10 1.9E-14 116.7 8.2 99 389-490 214-322 (351)
30 3nrd_A Histidine triad (HIT) p 99.0 2.8E-09 9.7E-14 96.3 10.8 87 402-489 14-102 (135)
31 1gup_A Galactose-1-phosphate u 98.9 4.8E-10 1.7E-14 117.1 6.0 97 389-485 194-301 (348)
32 2a22_A Vacuolar protein sortin 98.9 5.2E-09 1.8E-13 101.7 11.3 144 4-235 26-171 (215)
33 3qfm_A SAPH, putative uncharac 98.9 1.3E-08 4.5E-13 102.5 14.3 184 1-236 9-196 (270)
34 1z2w_A Vacuolar protein sortin 98.9 5.1E-09 1.7E-13 99.8 10.4 135 4-235 11-147 (192)
35 3rqz_A Metallophosphoesterase; 98.9 9.2E-10 3.1E-14 109.0 5.4 175 3-237 3-195 (246)
36 2nxf_A Putative dimetal phosph 98.9 2.4E-08 8.3E-13 100.9 14.7 209 3-233 5-286 (322)
37 3i4s_A Histidine triad protein 98.8 1.9E-08 6.6E-13 92.3 10.8 88 401-489 16-105 (149)
38 2xmo_A LMO2642 protein; phosph 98.8 2.4E-07 8.3E-12 99.1 19.6 191 3-212 39-287 (443)
39 1ute_A Protein (II purple acid 98.8 3.8E-08 1.3E-12 99.2 12.1 205 3-235 6-244 (313)
40 2q8u_A Exonuclease, putative; 98.7 2.5E-08 8.4E-13 103.2 9.3 219 1-250 16-269 (336)
41 3av0_A DNA double-strand break 98.7 4.3E-08 1.5E-12 103.6 11.2 203 2-249 19-251 (386)
42 1xm7_A Hypothetical protein AQ 98.6 1.2E-07 4E-12 90.3 10.9 139 3-211 1-152 (195)
43 2kkn_A Uncharacterized protein 98.6 1.2E-08 4E-13 96.5 3.7 62 4-77 23-86 (178)
44 3tho_B Exonuclease, putative; 98.6 8.9E-08 3E-12 101.0 10.3 215 4-251 1-252 (379)
45 1ii7_A MRE11 nuclease; RAD50, 98.5 7.9E-07 2.7E-11 91.8 13.3 73 4-77 1-88 (333)
46 3sp4_A Aprataxin-like protein; 98.4 3.8E-07 1.3E-11 87.3 7.4 86 405-490 23-129 (204)
47 1su1_A Hypothetical protein YF 98.3 1.1E-06 3.8E-11 84.8 8.2 69 4-77 26-101 (208)
48 1xzw_A Purple acid phosphatase 98.3 1E-05 3.5E-10 86.2 16.5 205 3-235 126-363 (426)
49 1hp1_A 5'-nucleotidase; metall 98.2 3.7E-05 1.3E-09 84.1 19.2 211 3-235 8-268 (516)
50 2qfp_A Purple acid phosphatase 98.2 1.8E-05 6E-10 84.3 15.2 187 3-217 119-326 (424)
51 3tgh_A Glideosome-associated p 98.0 7.6E-06 2.6E-10 85.1 8.2 212 3-235 3-255 (342)
52 3qfk_A Uncharacterized protein 98.0 8.3E-05 2.8E-09 81.6 16.4 205 3-235 19-269 (527)
53 1g5b_A Serine/threonine protei 97.9 6.6E-06 2.3E-10 79.7 5.2 67 3-76 12-78 (221)
54 2dfj_A Diadenosinetetraphospha 97.8 9.5E-06 3.2E-10 82.0 4.4 68 4-76 1-68 (280)
55 2qjc_A Diadenosine tetraphosph 97.8 1.4E-05 4.8E-10 79.9 5.1 66 4-76 19-84 (262)
56 3ive_A Nucleotidase; structura 97.6 0.0022 7.6E-08 69.9 19.6 206 3-235 6-257 (509)
57 4fbk_A DNA repair and telomere 97.6 0.00015 5.2E-09 77.9 9.9 75 2-77 75-196 (472)
58 4fbw_A DNA repair protein RAD3 97.6 0.00019 6.4E-09 76.4 10.3 75 3-78 13-134 (417)
59 3t1i_A Double-strand break rep 97.6 0.00024 8.2E-09 75.9 10.4 74 3-77 32-152 (431)
60 3h63_A Serine/threonine-protei 97.5 0.00012 4.3E-09 74.9 7.5 74 3-77 59-132 (315)
61 2ie4_C PP2A-alpha;, serine/thr 97.5 8.7E-05 3E-09 75.9 6.1 72 3-77 49-121 (309)
62 1wao_1 Serine/threonine protei 97.5 0.00012 4.2E-09 79.0 7.0 74 3-77 212-285 (477)
63 3icf_A PPT, serine/threonine-p 97.5 0.00014 4.9E-09 75.0 7.0 74 3-77 63-136 (335)
64 2z72_A Protein-tyrosine-phosph 97.5 8.5E-05 2.9E-09 77.1 5.3 73 3-76 70-152 (342)
65 1fjm_A Protein serine/threonin 97.4 0.0001 3.6E-09 76.0 5.7 73 3-77 56-128 (330)
66 1z84_A Galactose-1-phosphate u 97.4 0.001 3.6E-08 69.1 12.5 111 390-500 62-212 (351)
67 3e7a_A PP-1A, serine/threonine 97.4 0.00015 5E-09 73.8 5.6 73 3-77 55-127 (299)
68 1aui_A Calcineurin, serine/thr 97.2 0.00028 9.7E-09 76.3 6.2 73 3-77 82-154 (521)
69 3ll8_A Serine/threonine-protei 97.2 0.00034 1.2E-08 72.6 6.1 73 3-77 69-141 (357)
70 3c9f_A 5'-nucleotidase; 2',3'- 96.9 0.041 1.4E-06 60.6 20.1 204 3-249 15-270 (557)
71 2wdc_A SOXB, sulfur oxidation 96.8 0.038 1.3E-06 60.9 18.0 162 33-235 123-310 (562)
72 4h2g_A 5'-nucleotidase; dimer, 96.5 0.007 2.4E-07 66.6 9.8 114 3-126 25-174 (546)
73 3ztv_A NAD nucleotidase, NADN; 96.5 0.035 1.2E-06 61.4 15.3 110 4-126 13-159 (579)
74 2z1a_A 5'-nucleotidase; metal- 96.4 0.043 1.5E-06 60.3 15.4 111 3-126 29-172 (552)
75 1t71_A Phosphatase, conserved 96.2 0.0036 1.2E-07 63.0 4.9 72 1-78 2-76 (281)
76 3jyf_A 2',3'-cyclic nucleotide 95.4 0.12 3.9E-06 53.4 12.4 113 3-127 8-166 (339)
77 3gve_A YFKN protein; alpha-bet 95.1 0.086 2.9E-06 54.4 10.4 112 3-127 11-172 (341)
78 4h1s_A 5'-nucleotidase; hydrol 95.1 0.22 7.4E-06 54.3 14.2 113 3-127 3-153 (530)
79 1t70_A Phosphatase; crystal, X 93.4 0.13 4.5E-06 50.8 7.0 108 4-126 1-116 (255)
80 1m9o_A Tristetraproline; Cys3H 92.9 0.042 1.4E-06 43.8 2.1 56 315-370 14-75 (77)
81 2z06_A Putative uncharacterize 92.8 0.23 7.9E-06 48.9 7.6 108 4-126 1-113 (252)
82 3bl9_A Scavenger mRNA-decappin 92.2 0.45 1.6E-05 47.8 9.0 87 401-488 149-249 (301)
83 1vlr_A MRNA decapping enzyme; 91.2 0.5 1.7E-05 48.3 8.2 84 404-488 199-296 (350)
84 3d2q_A Muscleblind-like protei 86.4 0.37 1.3E-05 37.7 2.5 53 315-370 8-65 (70)
85 1gup_A Galactose-1-phosphate u 83.5 3.3 0.00011 42.5 8.9 62 425-487 106-173 (348)
86 2cqe_A KIAA1064 protein; CCCH 83.2 0.86 2.9E-05 38.2 3.5 47 315-370 15-61 (98)
87 3d2n_A Muscleblind-like protei 83.1 0.73 2.5E-05 37.4 3.0 53 315-370 11-66 (83)
88 2rpp_A Muscleblind-like protei 80.3 0.8 2.8E-05 37.7 2.3 53 315-370 19-74 (89)
89 2e5s_A Otthump00000018578; ZF- 78.4 0.56 1.9E-05 39.3 0.8 53 315-370 22-79 (98)
90 2d9n_A Cleavage and polyadenyl 77.7 1.4 4.6E-05 35.1 2.8 51 315-370 12-62 (77)
91 2rhk_C Cleavage and polyadenyl 69.0 2 6.7E-05 33.8 1.7 52 314-370 17-68 (72)
92 3e0j_A DNA polymerase subunit 63.4 10 0.00035 40.6 6.5 118 4-127 201-355 (476)
93 2d00_A V-type ATP synthase sub 63.2 31 0.0011 29.0 8.3 67 1-74 1-83 (109)
94 2lpm_A Two-component response 54.4 14 0.00048 31.7 4.7 68 1-74 4-89 (123)
95 3i42_A Response regulator rece 52.9 26 0.00087 28.6 6.1 18 1-18 1-18 (127)
96 2yeq_A Apased, PHOD, alkaline 51.1 12 0.00042 40.4 4.7 76 137-212 306-386 (527)
97 3heb_A Response regulator rece 51.1 32 0.0011 29.2 6.7 17 1-17 1-18 (152)
98 3flo_A DNA polymerase alpha su 49.2 33 0.0011 36.4 7.5 116 3-125 147-291 (460)
99 3kht_A Response regulator; PSI 48.1 37 0.0012 28.4 6.5 15 3-17 5-19 (144)
100 3jte_A Response regulator rece 45.7 44 0.0015 27.8 6.6 19 1-19 1-19 (143)
101 3h1g_A Chemotaxis protein CHEY 43.3 63 0.0022 26.4 7.2 15 1-15 3-17 (129)
102 3t6k_A Response regulator rece 40.7 56 0.0019 27.1 6.5 14 1-14 2-15 (136)
103 3to5_A CHEY homolog; alpha(5)b 39.9 40 0.0014 29.2 5.4 16 1-16 9-25 (134)
104 3grc_A Sensor protein, kinase; 38.2 75 0.0026 26.1 6.9 17 3-19 6-22 (140)
105 3c3m_A Response regulator rece 37.6 1.1E+02 0.0039 25.1 8.0 15 1-15 1-15 (138)
106 2zay_A Response regulator rece 36.6 92 0.0031 25.8 7.2 71 3-75 8-93 (147)
107 3aon_B V-type sodium ATPase su 35.5 62 0.0021 27.5 5.7 65 1-75 1-81 (115)
108 3lua_A Response regulator rece 34.2 87 0.003 25.8 6.7 20 1-20 1-21 (140)
109 3cg4_A Response regulator rece 30.4 1.2E+02 0.004 24.9 6.8 15 3-17 7-21 (142)
110 3gl9_A Response regulator; bet 28.4 1.8E+02 0.006 23.3 7.5 13 1-14 1-13 (122)
111 1k66_A Phytochrome response re 28.1 1.1E+02 0.0037 25.2 6.2 16 2-17 5-20 (149)
112 2f5g_A Transposase, putative; 28.1 2.5E+02 0.0085 23.5 8.6 68 424-500 15-82 (133)
113 3n53_A Response regulator rece 27.9 78 0.0027 26.1 5.2 14 1-14 1-14 (140)
114 2iuy_A Avigt4, glycosyltransfe 26.8 62 0.0021 31.5 5.0 40 1-41 1-56 (342)
115 3nhm_A Response regulator; pro 26.5 1.6E+02 0.0054 23.7 6.9 14 1-14 1-15 (133)
116 3rqi_A Response regulator prot 26.4 84 0.0029 27.7 5.4 15 1-15 5-19 (184)
117 3eod_A Protein HNR; response r 26.2 1.8E+02 0.0063 23.2 7.2 15 3-17 7-21 (130)
118 3gt7_A Sensor protein; structu 25.5 1.3E+02 0.0046 25.3 6.4 15 3-17 7-21 (154)
119 3cnb_A DNA-binding response re 24.9 1.3E+02 0.0046 24.4 6.2 17 3-19 8-24 (143)
120 1e2b_A Enzyme IIB-cellobiose; 24.4 1.2E+02 0.0041 25.0 5.6 43 1-44 1-43 (106)
121 2rdm_A Response regulator rece 24.2 1.9E+02 0.0065 23.1 7.0 15 1-15 3-17 (132)
122 3f6p_A Transcriptional regulat 22.9 2.5E+02 0.0085 22.2 7.4 13 1-14 1-13 (120)
123 2qvg_A Two component response 22.8 1.4E+02 0.0048 24.4 5.9 17 3-19 7-23 (143)
124 3kcn_A Adenylate cyclase homol 22.4 1.2E+02 0.0042 25.3 5.5 14 1-14 1-15 (151)
125 1t1v_A SH3BGRL3, SH3 domain-bi 21.9 2E+02 0.0069 22.4 6.3 67 1-75 1-71 (93)
126 2gkg_A Response regulator homo 21.2 1.2E+02 0.0039 24.1 4.9 20 1-20 3-22 (127)
127 3hdv_A Response regulator; PSI 20.9 2.6E+02 0.0089 22.4 7.2 17 3-19 7-23 (136)
128 2qxy_A Response regulator; reg 20.6 1.5E+02 0.0053 24.1 5.7 17 1-17 1-18 (142)
129 2d9m_A Zinc finger CCCH-type d 20.5 26 0.0009 27.1 0.5 29 314-343 21-49 (69)
130 2pof_A CDP-diacylglycerol pyro 20.1 1.9E+02 0.0065 27.6 6.5 86 422-513 48-145 (227)
No 1
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.78 E-value=1.4e-18 Score=177.17 Aligned_cols=205 Identities=14% Similarity=0.126 Sum_probs=132.2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhcccCCCC-ccEEEEccCCCCh--H
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGRSEIP-IPTYFIGDYGVGA--A 78 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~~~~p-~ptyfv~GN~~~~--~ 78 (567)
.|||++++|+|++...+ ++ .+.|+||++||++.... .....+.+++ .+++ .++|+|.||||.. .
T Consensus 59 ~mri~~iSD~H~~~~~l-----~i----~~~D~vi~aGDl~~~g~~~e~~~~~~~L---~~l~~~~v~~V~GNHD~~~d~ 126 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDGI-----QM----PYGDILLHTGDFTELGLPSEVKKFNDWL---GNLPYEYKIVIAGNHELTFDK 126 (296)
T ss_dssp EEEEEEEBCCTTCCTTC-----CC----CSCSEEEECSCCSSSCCHHHHHHHHHHH---HTSCCSEEEECCCTTCGGGCH
T ss_pred CeEEEEEeeCCCCcchh-----cc----CCCCEEEECCcccCCCCHHHHHHHHHHH---HhCCCCeEEEEcCCcccccch
Confidence 48999999999987632 11 25799999999986532 2223344444 4454 4599999999964 2
Q ss_pred HHHHHHhccccc--c---Ccc----cCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHH-HHHh
Q 008383 79 KVLLAASKNSAN--Q---GFK----MDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDA-LRAL 148 (567)
Q Consensus 79 ~~~~~l~~~~~~--~---~~~----~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~-L~~~ 148 (567)
.+++.+...... . ... .+...+..+++||.. ++++++|++|+|.+++ +..+.+.|.+++.+. +..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~i~Gl~i~Gsp~t---P~~~~~~f~~~~~~~~~~~~ 202 (296)
T 3rl5_A 127 EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD-SEVTVKGFRIYGAPWT---PWFNGWGFNLPRGQSLLDKW 202 (296)
T ss_dssp HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS-EEEEETTEEEEEECCB---CC--CCTTBCCTTHHHHHHH
T ss_pred hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC-CcEEECCEEEEEecCC---CCCCCcCCCcchHHHHHHHH
Confidence 344433100000 0 000 011234578899995 5668999999985553 333344554333333 3333
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHH-HHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELV-AEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~-~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
.....++||||||.+|+++.+.... . ..++|+..+.+++ ++.+|+||++||.|..|... ....|.|
T Consensus 203 ~~ip~~~dILvTH~PP~g~~D~~~~----~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~------~~g~t~v 269 (296)
T 3rl5_A 203 NLIPEGTDILMTHGPPLGFRDWVPK----E---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM------TDGYTTY 269 (296)
T ss_dssp TTSCTTCSEEEESSCBTTSSCEEGG----G---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE------ECSSCEE
T ss_pred hhCCCCCeEEEECCCcccccccccc----c---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE------EECCEEE
Confidence 3445789999999999999764310 0 1368999999999 69999999999988654321 2457999
Q ss_pred EEccCCCCc
Q 008383 228 LGLAPVGNK 236 (567)
Q Consensus 228 I~L~~~g~~ 236 (567)
||.|.++..
T Consensus 270 vNpGs~~~~ 278 (296)
T 3rl5_A 270 INASTCTVS 278 (296)
T ss_dssp EECBCSCTT
T ss_pred EECCcCCcC
Confidence 999999863
No 2
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.71 E-value=5.6e-16 Score=154.01 Aligned_cols=205 Identities=13% Similarity=0.093 Sum_probs=129.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhh-------------------------HHHHHHHh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL-------------------------LDEFMNYV 57 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~-------------------------~~~~~~~l 57 (567)
.|||++++|+|++...+.+.++.++.. +.|+||++||++...... .+.+.+++
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 82 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhc--CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 589999999999987665555655433 479999999998753220 02244444
Q ss_pred cccCCCCccEEEEccCCCChHHH--HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCC
Q 008383 58 EGRSEIPIPTYFIGDYGVGAAKV--LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFG 135 (567)
Q Consensus 58 ~g~~~~p~ptyfv~GN~~~~~~~--~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~ 135 (567)
....+.++|+|+|+||||..... .+.+.. . .+.+|+.+|.....++++|++|.++++....+.-+..
T Consensus 83 ~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~~---------~--~~~~~~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 151 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKIFLRAAYEA---------E--TAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 151 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHHHHHHHHHT---------T--TTCTTEEECSSEEEEETTTEEEEEECSEEESSCCBSS
T ss_pred HHHHhcCCcEEEEcCCCCchhhhhHHHHhhh---------c--cCCcceEEecCcceEEECCEEEEecCCCcCCCCcCHH
Confidence 44355678999999999975422 122221 1 1246778886432267899999999987532210001
Q ss_pred CCC----HHHHHHHHHhhcCCCCccEEEeCCCCccc-cccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 136 TYS----QDDVDALRALAEEPGIVDLFLTNEWPSGV-TNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 136 ~~t----~~dv~~L~~~~~~~~~vDILLTh~wP~gI-~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
... -...+.|..+.......+||+||.+|.+. .+.. +.. ....|+..+.++++..+|+++++||.|..
T Consensus 152 ~~~~~~~~~~~~~l~~l~~~~~~~~Il~~H~pp~~~~~d~~-----~~~--~~~~~~~~l~~~~~~~~~~~vl~GH~H~~ 224 (260)
T 2yvt_A 152 FVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRT-----PED--PKHHGSAVVNTIIKSLNPEVAIVGHVGKG 224 (260)
T ss_dssp SSCEEEHHHHHHHGGGGGGSCCCEEEEEESSCCSCSSTTCB-----TTB--SCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred HHhhcchhhHHHHHHHHHhcCCCCEEEEECCCccccccccC-----ccc--ccccCcHHHHHHHHHhCCCEEEECCccCC
Confidence 111 00002232222223457899999999875 2211 000 13679999999999999999999998832
Q ss_pred cccccccCCCCcceeEEEEccCCCC
Q 008383 211 YAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 211 yEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.. ....|++||.|.++.
T Consensus 225 ~~--------~~~~~~~in~Gs~~~ 241 (260)
T 2yvt_A 225 HE--------LVGNTIVVNPGEFEE 241 (260)
T ss_dssp EE--------EETTEEEEECCBGGG
T ss_pred cE--------EeCCEEEEeCCCCCC
Confidence 21 123588999999864
No 3
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.71 E-value=1.7e-16 Score=153.88 Aligned_cols=196 Identities=16% Similarity=0.155 Sum_probs=124.9
Q ss_pred CC--CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 1 MS--PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 1 M~--~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
|. +|||+++||+|++...+-+.++.+++. ++|+||++||++..... .+++.+++....+.+.|+|+|+||||...
T Consensus 1 ~~~~~mri~~iSD~H~~~~~~~~~~~~~~~~--~~D~vi~~GDl~~~~~~-~~~~~~~~~~l~~~~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 1 MRRTVRYILATSNPMGDLEALEKFVKLAPDT--GADAIALIGNLMPKAAK-SRDYAAFFRILSEAHLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCCCCCEEEEEECCTTCHHHHHHHHTHHHHH--TCSEEEEESCSSCTTCC-HHHHHHHHHHHGGGCSCEEEECCTTSCSH
T ss_pred CccceEEEEEEeeccCCHHHHHHHHHHHhhc--CCCEEEECCCCCCCCCC-HHHHHHHHHHHHhcCCcEEEECCCCCchh
Confidence 65 479999999999987655444444433 47999999999764311 22233333333456789999999999754
Q ss_pred HHHHHHhccccccCcccCCceecccEEEeCCCCeEEEc-CeEEEEEecccCCCCCCCCCCCHHHH--------HHHHH-h
Q 008383 79 KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLH-GLSVAYLSGRQSSEGQQFGTYSQDDV--------DALRA-L 148 (567)
Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~-GlrIa~lgG~~~~~~~~~~~~t~~dv--------~~L~~-~ 148 (567)
. +.+... .....+.+++++|.. ..+++. |++|.+++|....+. .++++++ +.+.. +
T Consensus 78 ~--~~~~~~-------~~~~~~~~~~~~l~~-~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l 143 (228)
T 1uf3_A 78 W--EYLREA-------ANVELVHPEMRNVHE-TFTFWRGPYLVAGVGGEIADEG----EPEEHEALRYPAWVAEYRLKAL 143 (228)
T ss_dssp H--HHHHHH-------HHHHHHCTTEEECBT-SEEEETTTEEEEEECSEEESSS----CCBSSSSCEEEHHHHHHHHGGG
T ss_pred H--HHHHhh-------hhhhccCcceEEccc-ceEeeCCCcEEecCCCCcCCCC----ccChhhcccchhhhHHHHHHHH
Confidence 2 222110 000112356677764 456777 999999998653221 1122111 11111 2
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFL 228 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI 228 (567)
.......+|++||.+|.+. . ....|+..+.++++..+|+++|+||.|.... ....|++|
T Consensus 144 ~~~~~~~~il~~H~p~~~~----~---------~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~--------~~~~~~~i 202 (228)
T 1uf3_A 144 WELKDYPKIFLFHTMPYHK----G---------LNEQGSHEVAHLIKTHNPLLVLVAGKGQKHE--------MLGASWVV 202 (228)
T ss_dssp GGSCSCCEEEEESSCBCBT----T---------TBTTSBHHHHHHHHHHCCSEEEECCSSCEEE--------EETTEEEE
T ss_pred HhCCCCCeEEEEccCcccC----C---------ccccCHHHHHHHHHHhCCCEEEEcccccCcc--------ccCCceEE
Confidence 2222458999999999875 1 0246889999999999999999999883321 13468999
Q ss_pred EccCCC
Q 008383 229 GLAPVG 234 (567)
Q Consensus 229 ~L~~~g 234 (567)
|.|+++
T Consensus 203 n~Gs~~ 208 (228)
T 1uf3_A 203 VPGDLS 208 (228)
T ss_dssp ECCBGG
T ss_pred EecccC
Confidence 999986
No 4
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=99.59 E-value=7.7e-16 Score=141.15 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=79.5
Q ss_pred CCCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 008383 388 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (567)
Q Consensus 388 ~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~ 462 (567)
+++|+||.+. ...+ ..||++++.+++++++.|..+||+||||++|++++.+|+++++.+|....+.+.+. |...
T Consensus 4 ~~~C~fC~i~~~e~~-~~iv~e~~~~~a~~~~~p~~pgh~LViPk~h~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~ 82 (145)
T 1y23_A 4 AENCIFCKIIAGDIP-SAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPI 82 (145)
T ss_dssp -CCCHHHHHHHTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHCCS
T ss_pred CCCCcCCccccCCCC-CCEEEECCCEEEEECCCCCCCCeEEEEEhhhhhhHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4689999854 3333 47899999999999999999999999999999999999999988887665555544 4445
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|+.+++.. ..++...|+|+|+||+...
T Consensus 83 ~~ni~~n~g~~~g~~v~HlH~HiiPr~~~ 111 (145)
T 1y23_A 83 GLNTLNNNGEKAGQSVFHYHMHIIPRYGK 111 (145)
T ss_dssp EEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred CEEEEEcCCcCCCCCcCEEEEEEEccccC
Confidence 66666665 2334468999999998754
No 5
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A*
Probab=99.58 E-value=1.8e-15 Score=134.27 Aligned_cols=98 Identities=18% Similarity=0.194 Sum_probs=77.1
Q ss_pred CCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-----c
Q 008383 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-----Q 462 (567)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-----~ 462 (567)
++|.||.+. .+.+ ..||++++.++++++..|.+|||+||||++|++++.+++++.+.++.++.+..++..++ .
T Consensus 3 ~~CiFC~I~~ge~~-~~iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 81 (119)
T 3n1s_A 3 EETIFSKIIRREIP-SDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAED 81 (119)
T ss_dssp CCCHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTCTTT
T ss_pred CCChhhhhhcCCCc-CCEEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 589999753 3344 56999999999999999999999999999999999999999777777666555555443 3
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecC
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
|+++++.. .+++...|+|+|+||+.
T Consensus 82 g~ni~~n~g~~agq~V~HlH~Hiipr~ 108 (119)
T 3n1s_A 82 GYRLIMNTNRHGGQEVYHIHMHLLGGR 108 (119)
T ss_dssp CEEEEEEEHHHHTCCSSSCCEEEEESS
T ss_pred CeEEEEeCCCCcCCCcCEEEEEEeCCc
Confidence 55555544 23455789999999974
No 6
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae}
Probab=99.58 E-value=3.7e-15 Score=139.20 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=82.4
Q ss_pred CCCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 008383 387 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (567)
Q Consensus 387 ~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~ 462 (567)
..++|+||.+........||++++++++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+. |...
T Consensus 26 ~~~~CiFC~i~~~e~p~~iV~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~ee~~~l~~~~~~v~~~l~~~~~~~ 105 (161)
T 3lb5_A 26 YDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQAD 105 (161)
T ss_dssp CCTTSHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSTTTSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCccEEEECCCEEEEECCCcCCCcEEEEEEeeccchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 357899998654333467999999999999999999999999999999999999999999888777666555 4455
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|++++++. ..++...|+|+|+||+...
T Consensus 106 g~ni~~n~g~~aGq~V~HlHiHiiPR~~~ 134 (161)
T 3lb5_A 106 GITVMQFNEAASQQTVYHLHFHIIPRMEG 134 (161)
T ss_dssp EEEEEEEESGGGTCCSCSCCEEEEEECTT
T ss_pred CEEEEEecCcccCCCCCEEEEEEEcccCC
Confidence 66666555 2334468999999998654
No 7
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=99.58 E-value=2.5e-15 Score=138.55 Aligned_cols=102 Identities=20% Similarity=0.279 Sum_probs=80.6
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhc--CC-
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQ--GK- 464 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~--g~- 464 (567)
+++|.||.+........||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+++. +.
T Consensus 4 m~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~ 83 (149)
T 3o0m_A 4 SMSCVFCAIVSGDAPAIRIYEDENFLGILDIRPFTRGHTLVIPKTHTVDLTDTPPETVAGMAAVGQRIARAARESGLHAD 83 (149)
T ss_dssp TTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSTTCEEEEESSCCCSTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCS
T ss_pred CCCCccCccccCCCCCCEEEECCCEEEEEcCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 568999975433223579999999999999999999999999999999999999999999999988888777654 22
Q ss_pred --ceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 465 --EAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 465 --~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
++++.. ..++...|+|+|+||+...
T Consensus 84 ~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 112 (149)
T 3o0m_A 84 GNNIAINDGKAAFQTVFHIHLHVVPRRNG 112 (149)
T ss_dssp EEEEECCCSGGGTCCSSSCCEEEEEECTT
T ss_pred ceEEEEecCCCCCCccceEEEEEECCccC
Confidence 222221 1233468999999998654
No 8
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=99.57 E-value=2.5e-15 Score=138.23 Aligned_cols=103 Identities=18% Similarity=0.197 Sum_probs=81.8
Q ss_pred CCCCCCccccCCC-CCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 008383 386 NRSKECWFCLSSP-SVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK---- 460 (567)
Q Consensus 386 ~~~~~C~FC~~~~-~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~---- 460 (567)
...++|.||.+.. ..+ ..||+++++++++++..|..|||+||||++|+.++.+++++++.+|....+.+.+.+.
T Consensus 6 ~~m~~CifC~i~~~e~~-~~iV~e~~~~~a~~d~~p~~pgh~lViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~ 84 (147)
T 3imi_A 6 HTADNCIFCKIIDGQIL-CSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFN 84 (147)
T ss_dssp CCGGGCHHHHHHTTSSC-CCEEEECSSEEEEECTTCSSTTCEEEEESSCCCSGGGCCHHHHHHHHHTHHHHHHHHHHHHC
T ss_pred cccCCCcCcccccCCCc-CCEEEECCCEEEEEcCCCCCCcEEEEEEeeccCChhhCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3467899997543 344 4699999999999999999999999999999999999999999998877666665543
Q ss_pred hcCCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 461 NQGKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 461 ~~g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
..|+.+++.. ..++...|+|+|+||+...
T Consensus 85 ~~~~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 115 (147)
T 3imi_A 85 PVGFNLLNNNGEKAGQTVFHFHLHLIPRYGE 115 (147)
T ss_dssp CSEEEEEEEESGGGTCCSSSCCEEEEEECST
T ss_pred CCCEEEEEeCCcccCCCcCEEEEEEeCCccC
Confidence 4556655554 2344478999999999763
No 9
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1
Probab=99.56 E-value=1.4e-14 Score=134.22 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=77.8
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 466 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~ 466 (567)
.++|+||... ...||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .+..-
T Consensus 9 ~~~C~FC~~~----~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~l~~~~~~~g 84 (154)
T 2oik_A 9 HKNCELCTTA----GGEILWQDALCRVVHVENQDYPGFCRVILNRHVKEMSDLRPAERDHLMLVVFAVEEAVREVMRPDK 84 (154)
T ss_dssp CTTCHHHHSC----CSEEEEECSSEEEEECCCTTCTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCccCCCC----CCeEEEECCcEEEEEcCCCCCCeEEEEEecCCcCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4579999754 357999999999999999999999999999999999999999999888777666666553 23332
Q ss_pred EEEEecCCCCCeeEEEEeecCcc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+...++...|+|+|+||+...
T Consensus 85 ~ni~~~gq~v~HlHiHiiPr~~~ 107 (154)
T 2oik_A 85 INLASLGNMTPHVHWHVIPRFKR 107 (154)
T ss_dssp EEEEECCSSSCSCEEEEEEECTT
T ss_pred EEhHHhCCCCCEEEEEEeCCCCC
Confidence 22332445578999999998764
No 10
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=99.56 E-value=6.4e-15 Score=133.99 Aligned_cols=100 Identities=13% Similarity=0.067 Sum_probs=81.1
Q ss_pred CCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCce
Q 008383 389 KECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEA 466 (567)
Q Consensus 389 ~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~ 466 (567)
.+|.||.+. .+.+ ..||+++++++++++..|.++||+||||++|+.++.+++++++.+|....+.+.+.+.+ .+..-
T Consensus 5 ~~CiFC~i~~~e~p-~~iV~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~ 83 (138)
T 3p0t_A 5 MASIFTKIINRELP-GRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTER 83 (138)
T ss_dssp HHHHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSE
T ss_pred CCChhhHHhcCCCC-cCEEEeCCCEEEEecCCCCCCcEEEEEEhHHhCchhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 469999743 3444 45899999999999999999999999999999999999999999999888777766543 45554
Q ss_pred EEEEecCCCCCeeEEEEeecCcc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+...++...|+|+|+||+...
T Consensus 84 ~n~~~~gq~v~HlH~HiiPr~~~ 106 (138)
T 3p0t_A 84 SGLIIAGLEVPHLHVHVFPTRSL 106 (138)
T ss_dssp EEEEECCSSCSSCCEEEEEESCG
T ss_pred CcEEECCcccCEEEEEEeccccC
Confidence 55553445578999999998653
No 11
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=99.55 E-value=4.8e-15 Score=131.32 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=75.3
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH-----hc
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-----NQ 462 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~-----~~ 462 (567)
..+|.||.+........||+++++++++++..|.++||+||||++|++++.+++++.+.++..+.+.+.++.+ ..
T Consensus 3 ~~~C~FC~i~~~e~~~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~~~~~~~~~~~~~~ 82 (119)
T 4egu_A 3 RMDCIFCKIANGEIPSTKVYEDDRVLAFNDLNPVAPYHILVVPKKHYDSLIDIPDKEMDIVSHIHVVINKIAKEKGFDQT 82 (119)
T ss_dssp CTTCHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGSCGGGTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCccCeecccCCCCCCEEEECCCEEEEECCCCCCCceEEEEechhhCCHhHCCHhHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3579999754332235799999999999999999999999999999999999998866666555544444333 44
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecC
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
|+.+++.. .+++...|+|+|+||+.
T Consensus 83 ~~ni~~n~g~~agq~v~HlH~Hiip~~ 109 (119)
T 4egu_A 83 GFRVINNCGSDGGQEVKHLHYHILAGK 109 (119)
T ss_dssp CEEEEEEETTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEeCCCCCCCCcCEEEEEEeCCc
Confidence 66666554 23344689999999974
No 12
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A*
Probab=99.54 E-value=3.2e-15 Score=132.12 Aligned_cols=100 Identities=19% Similarity=0.248 Sum_probs=73.9
Q ss_pred CCC-CccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---cC
Q 008383 388 SKE-CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---QG 463 (567)
Q Consensus 388 ~~~-C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~---~g 463 (567)
+++ |.||..........||+++++++++++..|..+||+||||++|+.++.++++++++++....+.++++.+. .|
T Consensus 5 m~~~CiFC~i~~~e~~~~iv~e~~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~g 84 (117)
T 3oj7_A 5 MADSCIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVSLIGKKECPEG 84 (117)
T ss_dssp ----CHHHHHHTTSSCCCEEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCTTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred cCCCCcccccccCCCCCCEEEECCcEEEEECCCCCCCceEEEEechHhCCHHHCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 344 99998643323467999999999999999999999999999999999999988777777776655555443 24
Q ss_pred CceEEEE--ecCCCCCeeEEEEeecC
Q 008383 464 KEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
+.+++.. .+++...|+|+|+||+-
T Consensus 85 ~ni~~n~g~~agq~v~H~H~Hiipr~ 110 (117)
T 3oj7_A 85 YRVVNNIGEDAGQTVKHIHFHILGGK 110 (117)
T ss_dssp EEEECCCSTTTTCCSSSCCEEEEESS
T ss_pred eEEEEcCCCCCCeeeeEEEEEEeCCC
Confidence 4443322 12333689999999973
No 13
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis}
Probab=99.54 E-value=5.9e-15 Score=144.05 Aligned_cols=103 Identities=21% Similarity=0.185 Sum_probs=81.8
Q ss_pred CCCCccccCCCC-CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----c
Q 008383 388 SKECWFCLSSPS-VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----Q 462 (567)
Q Consensus 388 ~~~C~FC~~~~~-~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~ 462 (567)
.++|+||.+... .....||++++.++++++..|.++||+||||++|+.++.+|+++++.+|..+.+.+.+.+++ .
T Consensus 68 ~~~CiFC~i~~~e~~~~~iV~edd~~~afld~~P~~pGH~LVIPkrHv~~l~dL~~ee~~~L~~l~~~v~~~l~~~~~~~ 147 (218)
T 3ano_A 68 SPAQPFTEIPQLSDEEGLVVARGKLVYAVLNLYPYNPGHLMVVPYRRVSELEDLTDLESAELMAFTQKAIRVIKNVSRPH 147 (218)
T ss_dssp --CCHHHHGGGSCHHHHTEEEECSSEEEEECSSCSSTTCEEEEESSCCCCGGGSCHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCcCcccccCCCCCceEEEECCcEEEEEccCCCCCcEEEEEechhhCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 457999986543 24567999999999999999999999999999999999999999999999887776666554 4
Q ss_pred CCceEEEE--ecCCCC-CeeEEEEeecCcch
Q 008383 463 GKEAVFFE--WLSKRG-THANLQAVPIPTSK 490 (567)
Q Consensus 463 g~~~v~~E--~~~~~~-~H~hi~~vPvp~~~ 490 (567)
|+.++++. ..++.. .|+|+|+||+...-
T Consensus 148 g~ni~~n~G~~aGq~V~~HlHiHIIPR~~gd 178 (218)
T 3ano_A 148 GFNVGLNLGTSAGGSLAEHLHVHVVPRWGGD 178 (218)
T ss_dssp EEEEEEEESGGGTCTTTTSCCEEEEEECTTG
T ss_pred CEEEEEecCcccCCcccCEEEEEEEcccCCC
Confidence 55555554 223345 89999999987653
No 14
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=99.53 E-value=6.3e-15 Score=139.13 Aligned_cols=103 Identities=21% Similarity=0.201 Sum_probs=80.3
Q ss_pred CCCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHH----HHhc
Q 008383 387 RSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMY----YKNQ 462 (567)
Q Consensus 387 ~~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~----~~~~ 462 (567)
..++|+||.+........||++++.+++++|..|..|||+||||++|+.++.+++++++.+|....+.+.+. |...
T Consensus 34 ~m~~CiFC~Ii~~e~p~~iV~e~e~~~afld~~P~~pgH~LVIPkrHv~~l~dL~~ee~~~L~~~~~~v~~~l~~~~~~~ 113 (173)
T 3l7x_A 34 SMNDCLFCKIVAGDIPSSKVYEDEDVLAFLDISQATKGHTLVIPKEHVRNALEMTQTQAANLFARIPKIARALQKATKAD 113 (173)
T ss_dssp CCTTCHHHHHHHTSSCCCEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHTHHHHHHHHHHHHTCS
T ss_pred CCCCCcccccccCCCCceEEEECCCEEEEEcCCCCCCcEEEEEeccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 367899998643322356999999999999999999999999999999999999999998888776555544 4445
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|+++++.. ..++...|+|+|+||+...
T Consensus 114 g~ni~~n~g~~aGq~V~HlHiHiIPR~~~ 142 (173)
T 3l7x_A 114 GLNIINNNEETAGQTVFHAHVHLVPRFAD 142 (173)
T ss_dssp EEEEEECCSGGGTCCSCSCCEEEEEECC-
T ss_pred CEEEEEecCcccCCCcCEEEEEEEecccC
Confidence 55655444 2334468999999998653
No 15
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii}
Probab=99.53 E-value=4.9e-15 Score=136.55 Aligned_cols=98 Identities=22% Similarity=0.289 Sum_probs=77.6
Q ss_pred CccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCc
Q 008383 391 CWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKE 465 (567)
Q Consensus 391 C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~ 465 (567)
|+||.+. ...+ ..||++++.++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .|+.
T Consensus 1 CiFC~i~~~e~~-~~iv~e~~~~~a~~d~~p~~pgh~lViPk~H~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~n 79 (149)
T 2eo4_A 1 CTFCSIINRELE-GYFVYEDEKFAAILDKYPVSLGHTLVIPKKHFENYLEADEDTLAELAKVVKLVSLGIKDAVKADGLR 79 (149)
T ss_dssp CHHHHHHTTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CcCcccccCCCC-ccEEEECCCEEEEECCCCCCCCeEEEEechhhCCHhHCCHHHHHHHHHHHHHHHHHHHHhcCCCCeE
Confidence 9999754 3343 47899999999999999999999999999999999999999999999887766666553 3444
Q ss_pred eEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 466 AVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 466 ~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
+++.. ..++...|+|+|+||+...
T Consensus 80 i~~n~g~~~gq~v~HlHiHviPr~~~ 105 (149)
T 2eo4_A 80 LLTNIGRSAGQVIFHLHVHIIPTWEG 105 (149)
T ss_dssp EECCCSGGGTCCSCSCCEEEEEECSS
T ss_pred EEEecCcCCCCCcCEEEEEEECCcCC
Confidence 44333 1233468999999998644
No 16
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=99.53 E-value=1.5e-15 Score=137.77 Aligned_cols=100 Identities=18% Similarity=0.260 Sum_probs=81.4
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceE
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 467 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~~v 467 (567)
.++|.||.+.. ....||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+...++.++
T Consensus 5 ~~~C~fC~i~~--~~~~iv~e~~~~~af~d~~p~~pgh~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~~~~~~~~ni~ 82 (135)
T 3r6f_A 5 MEGCIFCTLYR--KGANIIYETDRLFALIDRYPLSKGHFLVIPKAHHPYLHNYKPEELSGVLDTIRHLVQKFGFERYNIL 82 (135)
T ss_dssp -CCCHHHHHHH--HCCSCCEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCGGGGTTHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCcCccccc--CCceEEEECCCEEEEECCCCCCCCeEEEEEhhHhCCHhHCCHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 56899998643 2346899999999999999999999999999999999999999999999988888888776665544
Q ss_pred EEEecCCCCCeeEEEEeecCcc
Q 008383 468 FFEWLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 468 ~~E~~~~~~~H~hi~~vPvp~~ 489 (567)
+....++...|+|+|+||+...
T Consensus 83 ~n~g~gq~v~HlH~HiiPR~~~ 104 (135)
T 3r6f_A 83 QNNGNHQEVFHVHFHVIPFVSA 104 (135)
T ss_dssp CCSSSSCSSSSCCEEEEECCBT
T ss_pred EEcCCCCCccEEEEEEeccccC
Confidence 3321223368999999999764
No 17
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A
Probab=99.51 E-value=8.3e-15 Score=131.24 Aligned_cols=99 Identities=17% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCCCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----
Q 008383 387 RSKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN---- 461 (567)
Q Consensus 387 ~~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~---- 461 (567)
..++|.||... .+.+ ..||+++++++++++..|..+||+||||++|+.++.+++++.+.++..+.+.++++.+.
T Consensus 13 ~~~~CiFC~i~~~e~~-~~iv~e~e~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~l~~~~~~~~~~~~~~ 91 (126)
T 3o1c_A 13 PGGDTIFGKIIRKEIP-AKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLK 91 (126)
T ss_dssp TTCSSHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSSEEEEEEESSCCCCGGGCCGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCcchhhcCCCc-CCEEEECCCEEEEECCCCCCCceEEEEechHhchHhhCchhHHHHHHHHHHHHHHHHHHhCCC
Confidence 35689999753 3344 47999999999999999999999999999999999999988777777666555554443
Q ss_pred cCCceEEEE--ecCCCCCeeEEEEeec
Q 008383 462 QGKEAVFFE--WLSKRGTHANLQAVPI 486 (567)
Q Consensus 462 ~g~~~v~~E--~~~~~~~H~hi~~vPv 486 (567)
.|+++++.. .+++...|+|+|+||+
T Consensus 92 ~g~ni~~n~g~~agq~v~HlH~Hiipr 118 (126)
T 3o1c_A 92 KGYRMVVNEGSDGGQSVYHVHLHVLGG 118 (126)
T ss_dssp TCEEEECCCHHHHTCCSSSCCEEEEES
T ss_pred CCeEEEEecCCccCCccCEeEEEEeCC
Confidence 344444332 2234478999999997
No 18
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1
Probab=99.49 E-value=1.1e-14 Score=133.84 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=77.0
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQG---- 463 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g---- 463 (567)
.++|+||.+........||++++++++++|+.|..+||+||||++|++++.+++++.++++..+.+.++++.+..+
T Consensus 34 m~~CiFC~ii~~e~~~~iV~e~e~~~af~d~~P~~pgH~LViPkrHv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~~~~ 113 (147)
T 1xqu_A 34 LENCVFCKIIKRELPSTIYYEDERVIAIKDINPAAPVHVLIIPKEHIANVKEINESNAQILIDIHKAANKVAEDLGIAEK 113 (147)
T ss_dssp CTTCHHHHHHTTSSCBCEEEECSSEEEEECSSCSSSEEEEEEESSCCSSGGGCCTTTTTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cCCCcccccccCCCCcEEEEECCcEEEEEecCCCCccEEEEEeCcccCChhHCCHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 4689999854332245799999999999999999999999999999999999998887788777776666666543
Q ss_pred -CceEEEE--ecCCCCCeeEEEEeecC
Q 008383 464 -KEAVFFE--WLSKRGTHANLQAVPIP 487 (567)
Q Consensus 464 -~~~v~~E--~~~~~~~H~hi~~vPvp 487 (567)
+.+++.. ...+...|+|+|+||+.
T Consensus 114 gyni~~n~g~~aGq~v~HlHlHiiP~~ 140 (147)
T 1xqu_A 114 GYRLITNCGVAAGQTVFHLHYHLLGGV 140 (147)
T ss_dssp CEEEECCCSTTTTCCSCSCCEEEEESS
T ss_pred CEEEEEecCcccCCCccEEEEEEeCCC
Confidence 3333222 12233689999999974
No 19
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=99.49 E-value=2.6e-14 Score=131.78 Aligned_cols=101 Identities=17% Similarity=0.224 Sum_probs=81.1
Q ss_pred CCCCccccCC-CCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 388 SKECWFCLSS-PSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 388 ~~~C~FC~~~-~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
..+|.||.+- .+++ ..+|++++.+++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.. .
T Consensus 10 ~~~~iFc~Ii~geip-~~iV~ed~~~~af~d~~P~~pgH~LViPk~H~~~l~dL~~~e~~~l~~~~~~v~~~l~~~~~~~ 88 (149)
T 3ksv_A 10 AANCIFCKIIKGDIP-CAKVAETSKALAFMDINPLSRGHMLVIPKEHASCLHELGMEDAADVGVLLAKASRAVAGPDGSM 88 (149)
T ss_dssp CTTCHHHHHHHTSSC-CCEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHCTTSCC
T ss_pred cccCHHHHHHcCCCC-ccEEEECCCEEEEECCCCCCCCEEEEEeChhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4589999754 4455 46899999999999999999999999999999999999999999999988888877664 2
Q ss_pred CCceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 463 GKEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 463 g~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
|+++++.. ..++...|+|+|+||+...
T Consensus 89 g~ni~~n~g~~aGq~v~HlHiHiiPR~~~ 117 (149)
T 3ksv_A 89 QYNVLQNNGSLAHQEVPHVHFHIIPKTDE 117 (149)
T ss_dssp EEEEEECCSTTTTCCSSSCCEEEEEECCT
T ss_pred CEEEEEecCcccCCCCCEEEEEEEecccC
Confidence 33433332 1233468999999999765
No 20
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.40 E-value=1.3e-11 Score=122.89 Aligned_cols=201 Identities=11% Similarity=0.032 Sum_probs=122.2
Q ss_pred CEEEEEcCCCCCH------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHHHhcccCCCCccEEEE
Q 008383 4 PRILLCGDVLGRL------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMNYVEGRSEIPIPTYFI 70 (567)
Q Consensus 4 ~KILv~GDvhG~~------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~~l~g~~~~p~ptyfv 70 (567)
|||++++|+|++. ..+-+.++.+++...+.|+||++||++..... ....+.+++ ..+++|+|++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l---~~l~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRPEEYQVARQIL---GSLNYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCHHHHHHHHHHH---TTCSSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHH---HhcCCCEEEE
Confidence 7999999999984 44444455555443358999999999764322 122344444 5567899999
Q ss_pred ccCCCChHHHHHHHhccccccCcccCCceecccEEEeCC-CCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh-
Q 008383 71 GDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL- 148 (567)
Q Consensus 71 ~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~- 148 (567)
.||||....+...+... + . .+..|. +. .-++..+|++|.+|...... .....+++++++.|.+.
T Consensus 78 ~GNHD~~~~~~~~~~~~-~----~----~~~~~~---~~~~~~~~~~~~~~i~ld~~~~~--~~~~~~~~~~~~wl~~~l 143 (274)
T 3d03_A 78 PGNHDDKALFLEYLQPL-C----P----QLGSDA---NNMRCAVDDFATRLLFIDSSRAG--TSKGWLTDETISWLEAQL 143 (274)
T ss_dssp CCTTSCHHHHHHHHGGG-S----G----GGCSCG---GGCCEEECSSSSEEEECCCCCTT--CSSBCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhhh-h----c----CcccCC---CceEEEEEeCCEEEEEEeCCCCC--CCCCeeCHHHHHHHHHHH
Confidence 99999765443333210 0 0 000000 00 01223568999988765432 12345677777776653
Q ss_pred hcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 AEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
........|+++|.+|......... . ....+...+.+++++. ++.++|+||.|..+... . ...+-+
T Consensus 144 ~~~~~~~~iv~~H~p~~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~---~---~g~~~~ 210 (274)
T 3d03_A 144 FEGGDKPATIFMHHPPLPLGNAQMD-----P--IACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ---Y---RQALIS 210 (274)
T ss_dssp HHHTTSCEEEEESSCSSCCSCTTTG-----G--GSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE---E---TTEEEE
T ss_pred HhCCCCCEEEEECCCCcccCCcccC-----c--ccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe---E---CCEEEE
Confidence 2223457899999999865321100 0 0134678899999988 79999999988754331 1 224566
Q ss_pred EEccCCC
Q 008383 228 LGLAPVG 234 (567)
Q Consensus 228 I~L~~~g 234 (567)
++.|..+
T Consensus 211 ~~pg~~~ 217 (274)
T 3d03_A 211 TLPGTVH 217 (274)
T ss_dssp ECCCSSC
T ss_pred EcCCcce
Confidence 7777665
No 21
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A*
Probab=99.33 E-value=2.3e-12 Score=118.32 Aligned_cols=90 Identities=14% Similarity=0.220 Sum_probs=72.8
Q ss_pred CCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh----cCCceEEEE--ecC
Q 008383 400 VESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN----QGKEAVFFE--WLS 473 (567)
Q Consensus 400 ~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~----~g~~~v~~E--~~~ 473 (567)
++...||++++.++++++..|..+||+||||++|+.++.+|+++++.+|....+.+.+.+.. .|+.+++.. ..+
T Consensus 10 ip~~~iv~e~~~~~a~~d~~p~~pgh~LViPk~h~~~~~dL~~~e~~~l~~~~~~v~~~l~~~~~~~~~ni~~n~g~~ag 89 (147)
T 1fit_A 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAG 89 (147)
T ss_dssp ECGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSGGGT
T ss_pred cCCcEEEEECCCEEEEECCCCCCCcEEEEEEccccCChhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEecCCccC
Confidence 45677999999999999999999999999999999999999999999998877777666553 344444333 123
Q ss_pred CCCCeeEEEEeecCcc
Q 008383 474 KRGTHANLQAVPIPTS 489 (567)
Q Consensus 474 ~~~~H~hi~~vPvp~~ 489 (567)
+...|+|+|+||+...
T Consensus 90 q~v~HlH~HiiPr~~~ 105 (147)
T 1fit_A 90 QTVKHVHVHVLPRKAG 105 (147)
T ss_dssp CCSSSCCEEEEEECTT
T ss_pred CCccEEEEEEECCcCC
Confidence 4468999999998764
No 22
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.30 E-value=5.2e-11 Score=121.92 Aligned_cols=201 Identities=10% Similarity=0.006 Sum_probs=125.7
Q ss_pred CCEEEEEcCCCCC------------HHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh-hhHHHHHHHhccc-CCCCccEE
Q 008383 3 PPRILLCGDVLGR------------LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS-ELLDEFMNYVEGR-SEIPIPTY 68 (567)
Q Consensus 3 ~~KILv~GDvhG~------------~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~-~~~~~~~~~l~g~-~~~p~pty 68 (567)
+|||++++|+|.. ...+-+.++.+++.....|+||++||++.... .....+.+++... ...++|+|
T Consensus 25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~ 104 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELV 104 (330)
T ss_dssp SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEE
Confidence 6899999999962 44444445555542335899999999987532 2222344444221 12468999
Q ss_pred EEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHh
Q 008383 69 FIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRAL 148 (567)
Q Consensus 69 fv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~ 148 (567)
++.||||....+...+... .. ..+ ...-++.++|++|.+|.+.... .....+.+++++.|...
T Consensus 105 ~v~GNHD~~~~~~~~~~~~---------~~--~~~----~~~~~~~~~~~~~i~lds~~~~--~~~~~~~~~q~~wl~~~ 167 (330)
T 3ib7_A 105 WVMGNHDDRAELRKFLLDE---------AP--SMA----PLDRVCMIDGLRIIVLDTSVPG--HHHGEIRASQLGWLAEE 167 (330)
T ss_dssp ECCCTTSCHHHHHHHHHCC---------CC--CCS----CCCEEEEETTEEEEECCCCCTT--CCSBCCCHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHhccc---------cc--ccC----CcceEEEeCCEEEEEecCCCCC--CCCCccCHHHHHHHHHH
Confidence 9999999765544444311 00 000 0123456789999988776431 22345678888888764
Q ss_pred h-cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEE
Q 008383 149 A-EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRF 227 (567)
Q Consensus 149 ~-~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRF 227 (567)
. .......|+++|.+|......... . ....+...+.++++..+++++|+||.|..+... ...+.+
T Consensus 168 l~~~~~~~~iv~~Hh~p~~~~~~~~~-----~--~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~-------~~g~~~ 233 (330)
T 3ib7_A 168 LATPAPDGTILALHHPPIPSVLDMAV-----T--VELRDQAALGRVLRGTDVRAILAGHLHYSTNAT-------FVGIPV 233 (330)
T ss_dssp TTSCCTTCEEEECSSCSSCCSSGGGG-----G--GSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE-------ETTEEE
T ss_pred HHhcccCCeEEEEECCCCCCCccccc-----c--ccccCHHHHHHHHhccCceEEEECCCCCcccce-------ECCEEE
Confidence 3 223344799999999875321110 0 123567889999999999999999988764321 224677
Q ss_pred EEccCCC
Q 008383 228 LGLAPVG 234 (567)
Q Consensus 228 I~L~~~g 234 (567)
++.+..+
T Consensus 234 ~~~gs~~ 240 (330)
T 3ib7_A 234 SVASATC 240 (330)
T ss_dssp EECCCSS
T ss_pred EecCcce
Confidence 7777665
No 23
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=99.23 E-value=9.5e-12 Score=133.98 Aligned_cols=100 Identities=13% Similarity=0.152 Sum_probs=79.5
Q ss_pred CCCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cC---
Q 008383 388 SKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QG--- 463 (567)
Q Consensus 388 ~~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g--- 463 (567)
.+.|.||. ..++...||+++++++++++..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .+
T Consensus 296 ~~~c~fc~--~e~p~~~iv~e~~~~~a~~~~~p~~pgh~lviPk~h~~~~~~l~~~~~~~l~~~~~~v~~~l~~~~~~~~ 373 (440)
T 1ems_A 296 TGGLKFAR--FNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTS 373 (440)
T ss_dssp SSCCEETT--EECCGGGEEEECSSEEEEECSSCSSTTCEEEEESSCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCceeeec--cccCCceEEEECCCEEEEEcCCcCCCCeEEEEEccccCChhHCCHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 56899997 3345667999999999999999999999999999999999999999999999888777776653 23
Q ss_pred CceEEEE--ecCCCCCeeEEEEeecCcc
Q 008383 464 KEAVFFE--WLSKRGTHANLQAVPIPTS 489 (567)
Q Consensus 464 ~~~v~~E--~~~~~~~H~hi~~vPvp~~ 489 (567)
+.+++.. ...+...|+|+|+||+...
T Consensus 374 ~n~~~~~g~~~gq~v~HlH~Hiipr~~~ 401 (440)
T 1ems_A 374 TTICVQDGKDAGQTVPHVHIHILPRRAG 401 (440)
T ss_dssp EEEECCCSGGGTCCSSSCCEEEEEECSS
T ss_pred eEEEEecCCCCCCCccEEEEEEeCCCCC
Confidence 3333222 1233468999999998654
No 24
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=99.23 E-value=1.4e-11 Score=111.73 Aligned_cols=89 Identities=11% Similarity=-0.035 Sum_probs=73.0
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008383 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 479 (567)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 479 (567)
.+..+|+..+.|++.|.+.|..|||+||+|++|+.++.+++++++.++......+.+.+++ .+.+-+.+..+++...|+
T Consensus 11 ~d~~~v~~~~~~~v~l~~~p~~pGh~lV~~k~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 90 (137)
T 3ohe_A 11 ADTHKLGESRLCDVLLMNDNTWPWVILVPRVSGIREIYELPNEQQQRLLFESSALSEGMMELFGGDKMNVAALGNMVPQL 90 (137)
T ss_dssp HHEEEEEECSSEEEEEESCTTSCEEEEEESCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECCSSCCSC
T ss_pred cccEEEEECCcEEEEEcCCCCCCEEEEEecccccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeeccCcCCEE
Confidence 3467899999999999999999999999999999999999999988888777766666553 455545454355557999
Q ss_pred EEEEeecCcc
Q 008383 480 NLQAVPIPTS 489 (567)
Q Consensus 480 hi~~vPvp~~ 489 (567)
|+|+||+...
T Consensus 91 H~HviPR~~~ 100 (137)
T 3ohe_A 91 HLHHIVRYQG 100 (137)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCCCC
Confidence 9999998654
No 25
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=99.21 E-value=4.1e-11 Score=110.19 Aligned_cols=89 Identities=9% Similarity=0.049 Sum_probs=73.2
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008383 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 479 (567)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 479 (567)
+...+|+.++.||+.|.+.|.+|||+||+|++|+.++.+++++++.++......+.+.+++ .+.+-+.+..+++...|+
T Consensus 11 ~d~~~v~~~~~~~v~L~~~p~~pGh~LV~pk~Hv~~l~dL~~e~~~~l~~~~~~va~al~~~~~~~~~Ni~~aGq~V~Hl 90 (149)
T 3i24_A 11 QDCIVLGNLPLCKVLLIKEDIGPWLILVPRIEELKEIHHMTDEQQIQFIKESSAVAQLLEDNFSPDKINIGALGNLVPQL 90 (149)
T ss_dssp HHEEEEEECSSEEEEEECBSSTTEEEEEESCTTCSSGGGSCHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEECCSSCCSC
T ss_pred cCCEEEEECCCEEEEEcCCCCCCEEEEEeCccccCChhHCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEhhhhCCCCEE
Confidence 3467899999999999999999999999999999999999999988888777666666553 455555555445557899
Q ss_pred EEEEeecCcc
Q 008383 480 NLQAVPIPTS 489 (567)
Q Consensus 480 hi~~vPvp~~ 489 (567)
|+|+||+..+
T Consensus 91 H~HvIPR~~~ 100 (149)
T 3i24_A 91 HIHHIARFTT 100 (149)
T ss_dssp CEEEEEECTT
T ss_pred EEEEeCCccC
Confidence 9999998764
No 26
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.09 E-value=8.8e-10 Score=103.55 Aligned_cols=132 Identities=14% Similarity=-0.034 Sum_probs=90.7
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|.+|||+++||+||+...+.+.++.+.+ ..|+||++||+... .+..+ . .|+|+|.||||...
T Consensus 4 m~~m~i~~isD~H~~~~~~~~~~~~~~~---~~d~i~~~GD~~~~------~l~~l----~---~~~~~v~GNhD~~~-- 65 (176)
T 3ck2_A 4 MAKQTIIVMSDSHGDSLIVEEVRDRYVG---KVDAVFHNGDSELR------PDSPL----W---EGIRVVKGNMDFYA-- 65 (176)
T ss_dssp CCCEEEEEECCCTTCHHHHHHHHHHHTT---TSSEEEECSCCCSC------TTCGG----G---TTEEECCCTTCCST--
T ss_pred ccCcEEEEEecCCCCHHHHHHHHHHhhc---CCCEEEECCCCchH------HHHhh----h---CCeEEecCcccchh--
Confidence 7889999999999998876665665543 58999999997321 11111 1 28999999998421
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEe
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLT 160 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLT 160 (567)
.+.+. .++++ .+..|+++
T Consensus 66 ------------------~~p~~-------~~~~~-------------------------------------~~~~i~~~ 83 (176)
T 3ck2_A 66 ------------------GYPER-------LVTEL-------------------------------------GSTKIIQT 83 (176)
T ss_dssp ------------------TCCSE-------EEEEE-------------------------------------TTEEEEEE
T ss_pred ------------------cCCcE-------EEEEE-------------------------------------CCeEEEEE
Confidence 00110 01111 23578999
Q ss_pred CCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 161 NEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 161 h~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
|.+|.++. .+...+.+++...++.+.++||.|..+... ...+++||.|.++.
T Consensus 84 Hg~~~~~~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 84 HGHLFDIN----------------FNFQKLDYWAQEEEAAICLYGHLHVPSAWL-------EGKILFLNPGSISQ 135 (176)
T ss_dssp CSGGGTTT----------------TCSHHHHHHHHHTTCSEEECCSSCCEEEEE-------ETTEEEEEECCSSS
T ss_pred CCCccCCC----------------CCHHHHHHHHHhcCCCEEEECCcCCCCcEE-------ECCEEEEECCCCCc
Confidence 99886531 356678888888999999999988654421 23589999998874
No 27
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.05 E-value=4e-09 Score=100.73 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=48.8
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~ 78 (567)
+|||++++|+||+...+-+.++.++.. ..|+||++||++.+ +..+++ .+++.|+|+|.||||...
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~--~~D~ii~~GDl~~~------~~~~~l---~~l~~~~~~V~GNhD~~~ 89 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL------FVIKEF---ENLNANIIATYGNNDGER 89 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST------HHHHHG---GGCSSEEEEECCTTCCCH
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhc--CCCEEEECCCCCCH------HHHHHH---HhcCCCEEEEeCCCcchH
Confidence 389999999999988776666665532 47999999999863 233444 345689999999999653
No 28
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.04 E-value=1.8e-09 Score=106.70 Aligned_cols=188 Identities=11% Similarity=0.056 Sum_probs=102.4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHH---hhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVN---KSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~---~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|||+++||+||++..+.+.++.++ ......|+||++||++..... ..++.+++....+ +.++|+|.||||.. .
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~-~~~~~~~l~~l~~-~~~~~~v~GNhD~~--~ 77 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY-PKEVIEVIKDLTK-KENVKIIRGKYDQI--I 77 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC-HHHHHHHHHHHHH-HSCEEEECCHHHHH--H
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCC-HHHHHHHHHhhHh-hcCeeEEecchHHH--h
Confidence 799999999999887776666665 432147999999999764322 1233333321111 14799999999732 1
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcC----CCCcc
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEE----PGIVD 156 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~----~~~vD 156 (567)
..... . +.+ +.. ....++.++. ..+. . .+...++++.++.|..+... ..+.+
T Consensus 78 ~~~~~-----------~---~~~--~~~-~~~~~~~~~~---~~~~-~---~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 78 AMSDP-----------H---ATD--PGY-IDKLELPGHV---KKAL-K---FTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHSCT-----------T---CSS--SGG-GGGSSCCHHH---HHHH-H---HHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred hcccc-----------c---cCC--ccc-ccchhhhHHH---HHHH-H---HHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 11110 0 000 000 0000000000 0000 0 00011233444445443110 12458
Q ss_pred EEEeCCCCc-cccccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCCC
Q 008383 157 LFLTNEWPS-GVTNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVG 234 (567)
Q Consensus 157 ILLTh~wP~-gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g 234 (567)
|+++|..|. ...... ....+...+.+++... ++++.|+||.|..+... ...|.+||.|.++
T Consensus 134 i~~~H~~p~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------~~~~~~in~Gs~~ 196 (252)
T 1nnw_A 134 VFGVYGSPINPFDGEV----------LAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------TRYGRVVCPGSVG 196 (252)
T ss_dssp EEEESSCSSCTTTCCC----------CSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------ETTEEEEEECCSS
T ss_pred EEEEcCCCCCCccccc----------CCCCCHHHHHHHHhcCCCCCEEEECCccccceEe-------cCCeEEEECCCcc
Confidence 999999884 321110 0123457788888888 99999999988754431 2358999999998
Q ss_pred Cc
Q 008383 235 NK 236 (567)
Q Consensus 235 ~~ 236 (567)
.+
T Consensus 197 ~~ 198 (252)
T 1nnw_A 197 FP 198 (252)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 29
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=98.99 E-value=5.6e-10 Score=116.69 Aligned_cols=99 Identities=16% Similarity=0.221 Sum_probs=76.4
Q ss_pred CCCccccCCCCCCcceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHH-h---cCC
Q 008383 389 KECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYK-N---QGK 464 (567)
Q Consensus 389 ~~C~FC~~~~~~~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~-~---~g~ 464 (567)
.+|.||.... ..+||++++++++++|..|..|||+||||++|+.++.+++++++.+|....+.+.+.+. . .++
T Consensus 214 ~~ciFc~ii~---~E~iV~E~e~~~af~~~~p~~P~h~lViPk~Hv~~l~dl~~~e~~~La~~l~~v~~~l~~~~~~~~y 290 (351)
T 1z84_A 214 GKCCLCEAKS---KHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPY 290 (351)
T ss_dssp SSCTTTTHHH---HSEEEEECSSEEEEECTTCSSTTCEEEEESSCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHTTSCCE
T ss_pred CCCHHHHHHh---cCeEEecCCcEEEEeccCCCCCeEEEEEeccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 5799997532 12299999999999999999999999999999999999999999999988876654443 2 345
Q ss_pred ceEEEE-ecC-----CCCCeeEEEEeecCcch
Q 008383 465 EAVFFE-WLS-----KRGTHANLQAVPIPTSK 490 (567)
Q Consensus 465 ~~v~~E-~~~-----~~~~H~hi~~vPvp~~~ 490 (567)
.+++.. -.+ +...|+|+|++|+-+..
T Consensus 291 n~~~n~gp~~g~~~~q~v~HlHiHiiPR~~~~ 322 (351)
T 1z84_A 291 NYMIHTSPLKVTESQLPYTHWFLQIVPQLSGV 322 (351)
T ss_dssp EEEEECCCTTCCGGGGGGCCCEEEEEECCCCC
T ss_pred EEEEeCCCccCCCCCCccceEEEEEEccCCCc
Confidence 555443 112 13479999999976543
No 30
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=98.96 E-value=2.8e-09 Score=96.30 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=68.2
Q ss_pred cceEEEECCEEEEEecCCCCCCCeEEEEec-cccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCee
Q 008383 402 SHLIVSVGEYYYCALPKGPLVEDHVLVIPV-EHVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTHA 479 (567)
Q Consensus 402 ~hliis~g~~~yl~l~kgpl~~gH~LIiP~-~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H~ 479 (567)
...+|+.++.|++.|.+.|..|| .||||. +|+.++.+++++++.++......+.+.+++ .+.+-+.+...++...|+
T Consensus 14 ~~~~v~~~~~~~v~l~~~~~~p~-~lvVpkr~h~~~l~dl~~~~~~~l~~~~~~v~~~l~~~~~~~~~N~~~aGq~V~Hl 92 (135)
T 3nrd_A 14 DGIPIGTLGLCQMRLMNDRRWPW-LILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGALGNIVRQL 92 (135)
T ss_dssp HEEEEEECSSEEEEEESCTTSCE-EEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCSC
T ss_pred CCEEEEECCcEEEEEcCCCCCCE-EEEEcCccccCChHHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccCCCCEE
Confidence 45689999999999999999995 577787 899999999999888888777666665543 454445555345557899
Q ss_pred EEEEeecCcc
Q 008383 480 NLQAVPIPTS 489 (567)
Q Consensus 480 hi~~vPvp~~ 489 (567)
|+|+||+..+
T Consensus 93 H~HviPR~~~ 102 (135)
T 3nrd_A 93 HVHVIARREG 102 (135)
T ss_dssp CEEEEEECTT
T ss_pred EEEEecCCCC
Confidence 9999998654
No 31
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=98.95 E-value=4.8e-10 Score=117.10 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=74.2
Q ss_pred CCCccccCCC-CCC-cceEEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-c---
Q 008383 389 KECWFCLSSP-SVE-SHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKN-Q--- 462 (567)
Q Consensus 389 ~~C~FC~~~~-~~~-~hliis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~--- 462 (567)
++|.||.... ..+ ...||++++++++++|..|..+||+||||++|+.++.+++++++.+|....+.+.+.+.+ .
T Consensus 194 ~~Cifc~ii~~E~~~~~~iV~E~e~~~af~~~~p~~pgh~lViPK~Hv~~l~dL~~~e~~~La~~l~~v~~~l~~~~~~~ 273 (348)
T 1gup_A 194 KSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCS 273 (348)
T ss_dssp SSCHHHHHHHHHHHHCTTEEEECSSEEEECCTTCCSTTCEEEEESSCCSSGGGCCHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCchhHHHhhccccCceEEEeCCcEEEEEccCCCCceEEEEEeCcccCChHHCCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6899997532 121 347899999999999999999999999999999999999999999998776655555443 2
Q ss_pred -CCceEEEEe-cC---CCCCeeEEEEee
Q 008383 463 -GKEAVFFEW-LS---KRGTHANLQAVP 485 (567)
Q Consensus 463 -g~~~v~~E~-~~---~~~~H~hi~~vP 485 (567)
++.+++.-. .+ +...|+|+|+||
T Consensus 274 ~~Yn~g~~~~p~~g~~q~v~HlHiHiiP 301 (348)
T 1gup_A 274 FPYSMGWHGAPFNGEENQHWQLHAHFYP 301 (348)
T ss_dssp CCEEEEEECCCSSSSCCTTCCCEEEEEC
T ss_pred CCeEEEEEeCCCCCCCCcccEEEEEEec
Confidence 444444431 12 235799999999
No 32
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.91 E-value=5.2e-09 Score=101.72 Aligned_cols=144 Identities=13% Similarity=0.095 Sum_probs=87.7
Q ss_pred CEEEEEcCCCCCHHH--HHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH
Q 008383 4 PRILLCGDVLGRLNQ--LFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 4 ~KILv~GDvhG~~~~--l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~ 81 (567)
|||++++|+|++... +.+.+.++.++ ...|+||++||++. .+..+++ .+++.|+|+|.||||...
T Consensus 26 m~i~~iSD~H~~~~~~~l~~~l~~~~~~-~~~D~vi~~GDl~~------~~~l~~l---~~~~~~v~~V~GNHD~~~--- 92 (215)
T 2a22_A 26 DLVLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCS------QEYVEML---KNITKNVYIVSGDLDSAI--- 92 (215)
T ss_dssp EEEEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCC------HHHHHHH---HHHCSCEEECCCTTCCSC---
T ss_pred cEEEEEecCCCCCChHHHHHHHHHHHhc-CCCCEEEECCCCCC------HHHHHHH---HHcCCCEEEecCCCcCcc---
Confidence 799999999997532 33333333222 35899999999985 1233333 233468999999998431
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
. ...+. ++.. .+ . . ......+..|+++|
T Consensus 93 ---------------~-~~~~~--~~~~-----------------lp--~----~-----------~~~~~~~~~i~l~H 120 (215)
T 2a22_A 93 ---------------F-NPDPE--SNGV-----------------FP--E----Y-----------VVVQIGEFKIGLMH 120 (215)
T ss_dssp ---------------C-BCCGG--GTBC-----------------CC--S----E-----------EEEEETTEEEEEEC
T ss_pred ---------------c-ccChh--hHhh-----------------CC--c----e-----------EEEecCCeEEEEEc
Confidence 0 00000 0000 00 0 0 00001346799999
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
..|... ..+...+.++++...+.|.++||.|..+.. ....+++||.|.++.
T Consensus 121 g~~~~~----------------~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~-------~~~~~~~inpGS~~~ 171 (215)
T 2a22_A 121 GNQVLP----------------WDDPGSLEQWQRRLDCDILVTGHTHKLRVF-------EKNGKLFLNPGTATG 171 (215)
T ss_dssp STTSSS----------------TTCHHHHHHHHHHHTCSEEEECSSCCCEEE-------EETTEEEEECCCSSC
T ss_pred CCccCC----------------CCCHHHHHHHHhhcCCCEEEECCcCCCccE-------eeCCEEEEECCcccc
Confidence 777532 124567788888889999999998865432 123589999999864
No 33
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=98.90 E-value=1.3e-08 Score=102.49 Aligned_cols=184 Identities=11% Similarity=0.109 Sum_probs=108.1
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHH
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKV 80 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~ 80 (567)
|...||+++||+||++..|-+.++.+... +.|.|||+||++..... ..++.+++. +. .|+++|.||||. .+
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~~-~~~~~~~l~---~~-~~~~~v~GNhD~--~~ 79 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL--GVDEYWLLGDILMPGTG-RRRILDLLD---QL-PITARVLGNWED--SL 79 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT--TCCEEEECSCCSSSSSC-SHHHHHHHH---TS-CEEEECCCHHHH--HH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCC-HHHHHHHHH---cc-CCEEEEcCChHH--HH
Confidence 44679999999999998887777776654 47999999999865433 234555553 22 278999999973 23
Q ss_pred HHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhc----CCCCcc
Q 008383 81 LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAE----EPGIVD 156 (567)
Q Consensus 81 ~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~----~~~~vD 156 (567)
+..... .... .. .... .+ +-.. .-+...++++.++.|..+.. .-.+..
T Consensus 80 ~~~~~~----------~~~~-~~-----~~~~-~~--------~~~~---~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~ 131 (270)
T 3qfm_A 80 WHGVRK----------ELDS-TR-----PSQR-YL--------LRQC---QYVLEEISLEEIEVLHNQPLQIHRQFGDLT 131 (270)
T ss_dssp HHHHTT----------CSCT-TS-----HHHH-HH--------HHHH---HHHHTTSCHHHHHHHHSCCSEEEEEETTEE
T ss_pred HHhhcc----------ccCC-Cc-----HHHH-HH--------HHHH---HHHHHHcCHHHHHHHHhCCCceEEEECCcE
Confidence 332210 0000 00 0000 00 0000 00012445677777776521 114568
Q ss_pred EEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCCc
Q 008383 157 LFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNK 236 (567)
Q Consensus 157 ILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~ 236 (567)
|+++|..|.......- . .......+.+++......+.|+||.|.-+.+. ....+.+||.|++|.+
T Consensus 132 i~lvHg~p~~~~~~~~---~------~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------~~~~~~~iNpGSvg~p 196 (270)
T 3qfm_A 132 VGISHHLPDKNWGREL---I------HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------GTGGQLIVNPGSIGQP 196 (270)
T ss_dssp EEEESSBTTBSSSSTT---S------TTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------CTTSCEEEEECCSSSC
T ss_pred EEEEECCCCCCCCcee---c------CCCcHHHHHHHhcccCCCEEEECCcCchHhee------ccCCEEEEECCCccCC
Confidence 9999988875421100 0 11234457777777789999999998644321 1235789999999975
No 34
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.89 E-value=5.1e-09 Score=99.77 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=86.3
Q ss_pred CEEEEEcCCCCCHH--HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHH
Q 008383 4 PRILLCGDVLGRLN--QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVL 81 (567)
Q Consensus 4 ~KILv~GDvhG~~~--~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~ 81 (567)
|||++++|+|++.. .+.+++.++.++ ...|+||++||++. . +..+++ .+.+.|+|+|.||||...
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~--~----~~~~~l---~~~~~~~~~v~GNhD~~~--- 77 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT--K----ESYDYL---KTLAGDVHIVRGDFDENL--- 77 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS--H----HHHHHH---HHHCSEEEECCCTTCCCT---
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC--H----HHHHHH---HhcCCCEEEEcCCcCccc---
Confidence 89999999998642 233344443322 25899999999985 1 223333 223468999999998421
Q ss_pred HHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 82 LAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 82 ~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
.+... .++++ .+..|+++|
T Consensus 78 -----------------~lp~~-------~~~~~-------------------------------------~~~~i~l~H 96 (192)
T 1z2w_A 78 -----------------NYPEQ-------KVVTV-------------------------------------GQFKIGLIH 96 (192)
T ss_dssp -----------------TSCSE-------EEEEE-------------------------------------TTEEEEEEC
T ss_pred -----------------cCCcc-------eEEEE-------------------------------------CCEEEEEEC
Confidence 00000 01111 235688888
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
..|.... .+...+.++++...+.|.++||.|..+.. ....+++||.|+++.
T Consensus 97 g~~~~~~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~~~~-------~~~~~~~inpGS~~~ 147 (192)
T 1z2w_A 97 GHQVIPW----------------GDMASLALLQRQFDVDILISGHTHKFEAF-------EHENKFYINPGSATG 147 (192)
T ss_dssp SCCCCBT----------------TCHHHHHHHHHHHSSSEEECCSSCCCEEE-------EETTEEEEECCCTTC
T ss_pred CCcCCCC----------------CCHHHHHHHHHhcCCCEEEECCcCcCccE-------eECCEEEEECCcccc
Confidence 7775421 23556778888889999999998865432 123589999999864
No 35
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.89 E-value=9.2e-10 Score=109.04 Aligned_cols=175 Identities=13% Similarity=0.034 Sum_probs=103.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCChHHHHH
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLL 82 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~ 82 (567)
.|||+++||+||++..+.+.++.+. +.|.+|++||++..... ..++.+++.. .+ .+|+|.||||.. +..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~----~~d~ii~~GDl~~~g~~-~~~~~~~l~~---~~-~~~~v~GNhD~~--~~~ 71 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG----RVDDIWSLGDIVGYGPR-PRECVELVRV---LA-PNISVIGNHDWA--CIG 71 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC----SCSEEEECSCCSSSSSC-HHHHHHHHHH---HC-SSEECCCHHHHH--HTC
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc----CCCEEEECCCcCCCCCC-HHHHHHHHHh---cC-CCEEEeCchHHH--Hhc
Confidence 5899999999999988766665554 57999999999875433 2233444322 11 269999999732 111
Q ss_pred HHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCC-CCCCCCCCHHHHHHHHHhhcCCCCccEEEeC
Q 008383 83 AASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSE-GQQFGTYSQDDVDALRALAEEPGIVDLFLTN 161 (567)
Q Consensus 83 ~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~-~~~~~~~t~~dv~~L~~~~~~~~~vDILLTh 161 (567)
.. .. .. .. +..... ..+...++++.++.|..+......-+|+++|
T Consensus 72 ~~-----------~~----~~-----------~~--------~~~~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~i~~~H 117 (246)
T 3rqz_A 72 RL-----------SL----DE-----------FN--------PVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVH 117 (246)
T ss_dssp CC-----------CC----C-------------C--------GGGGCHHHHHHHHCCHHHHHHHHHCCSEEEETTEEEES
T ss_pred cC-----------Cc----cc-----------cC--------HHHHHHHHHHHHHcCHHHHHHHHhCCcEEEECCEEEEE
Confidence 00 00 00 00 000000 0001234566666777653211123899999
Q ss_pred CCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccc-----------------cccCCCCcce
Q 008383 162 EWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYARE-----------------PYSNVDAVHV 224 (567)
Q Consensus 162 ~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~-----------------Py~~~~~~~~ 224 (567)
..|...... .......+.++++...+++.|+||.|.-|.+. +|.- ...
T Consensus 118 g~p~~~~~~------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l---~~g 182 (246)
T 3rqz_A 118 GSPRHPIWE------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDV---SSG 182 (246)
T ss_dssp SCSSSTTTC------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEEC---SSS
T ss_pred CCcCCcccc------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeec---CCC
Confidence 988764210 11234677888889999999999998654332 0100 113
Q ss_pred eEEEEccCCCCcc
Q 008383 225 TRFLGLAPVGNKE 237 (567)
Q Consensus 225 TRFI~L~~~g~~~ 237 (567)
+++||.|++|.+.
T Consensus 183 ~~ivNpGSVG~Pr 195 (246)
T 3rqz_A 183 RYIINPGAVGQPR 195 (246)
T ss_dssp CEEEEECCSSCCC
T ss_pred eEEEECCccCCCC
Confidence 8999999998753
No 36
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=98.86 E-value=2.4e-08 Score=100.89 Aligned_cols=209 Identities=11% Similarity=-0.004 Sum_probs=113.4
Q ss_pred CCEEEEEcCCCCCH-------------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcc
Q 008383 3 PPRILLCGDVLGRL-------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEG 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~-------------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g 59 (567)
.|||++++|+|... ..+-+.++.+++ .+.|+||++||++..... ..+++..++.-
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 58999999999865 334444555554 357999999999875321 02233333322
Q ss_pred cCCCCccEEEEccCCCCh----HHHHHHHhccccccCcccCCceecccEEEeCC-CCeEEE-cCeEEEEEecccCC----
Q 008383 60 RSEIPIPTYFIGDYGVGA----AKVLLAASKNSANQGFKMDGFKVTDNLFWLKG-SGNFTL-HGLSVAYLSGRQSS---- 129 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~----~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~-~gv~~~-~GlrIa~lgG~~~~---- 129 (567)
..++++|+|+++||||.. ..+...+..... ......+..+.. .+. .-.+.. +|++|..|.+....
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~y~~~~~~~~~~i~ld~~~~~~~~~ 157 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQ-RTGTDTGSDLIG----DDIYAYEFSPAPNFRFVLLDAYDLSVIGR 157 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG----GTCCCEEEEEETTEEEEECCTTSBCSSSS
T ss_pred HHhcCCcEEEecCCCCcccCCHHHHhhhhCCccc-ccccccccccCC----CCceEEEEecCCCEEEEEEcCceeccccc
Confidence 245688999999999852 111111110000 000000000110 111 112244 68888888765310
Q ss_pred ------------------CC----C--------------CCCCCCHHHHHHHHHh-hcCC--CCccEEEeCCCCcccccc
Q 008383 130 ------------------EG----Q--------------QFGTYSQDDVDALRAL-AEEP--GIVDLFLTNEWPSGVTNK 170 (567)
Q Consensus 130 ------------------~~----~--------------~~~~~t~~dv~~L~~~-~~~~--~~vDILLTh~wP~gI~~~ 170 (567)
+. . ....+.++.++.|.+. .... ...-|+++|.+|......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~ 237 (322)
T 2nxf_A 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAAD 237 (322)
T ss_dssp CTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSC
T ss_pred CCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhcCCcEEEEEccCCCCCCCC
Confidence 00 0 0123457777766642 1111 234599999999765321
Q ss_pred ccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCC
Q 008383 171 AAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPV 233 (567)
Q Consensus 171 ~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~ 233 (567)
. . ....+...+.+++... +.+++|+||.|....... ...+++|+.+..
T Consensus 238 ~------~---~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------~~g~~~i~~~~~ 286 (322)
T 2nxf_A 238 P------I---CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------SSGAQHITLEGV 286 (322)
T ss_dssp G------G---GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------TTSCEEEECCCG
T ss_pred c------c---ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------cCCceEEEecch
Confidence 0 0 1123677888888887 678899999886543221 224778877665
No 37
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=98.81 E-value=1.9e-08 Score=92.30 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=68.8
Q ss_pred CcceEEEECCEEEEEecCCCCCCCeEEEEecc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCceEEEEecCCCCCe
Q 008383 401 ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVE-HVPNTISTSPECEKELGRFQNSLMMYYKN-QGKEAVFFEWLSKRGTH 478 (567)
Q Consensus 401 ~~hliis~g~~~yl~l~kgpl~~gH~LIiP~~-H~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~~~~~~~H 478 (567)
....++.....+++.+...+ +.+|+||||++ |+.++.+++++++.+|....+.+.+.++. .+.+-+.+..+++...|
T Consensus 16 ~d~~~~~e~p~~~v~l~~~~-~~~H~LVIPk~~H~~~l~dL~~e~~~~l~~~~~~va~~l~~~~~~~g~N~~~aGq~V~H 94 (149)
T 3i4s_A 16 EDTIDIGDLPLSKVLVIKDA-NYPWLLLVPRRPDAVEIIDLDEVQQAQLMTEISRVSRALKEITKCDKLNIAALGNLVPQ 94 (149)
T ss_dssp HHEEEEEECSSEEEEEESCT-TSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECCSSCCS
T ss_pred hCCEEEEEcCceEEEECCCC-CCCEEEEEecccccCChhHCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecCCcCCE
Confidence 34668899999999998544 57799999999 99999999999999988887777766553 34444444535555799
Q ss_pred eEEEEeecCcc
Q 008383 479 ANLQAVPIPTS 489 (567)
Q Consensus 479 ~hi~~vPvp~~ 489 (567)
+|+|+||+..+
T Consensus 95 lH~HvIPR~~~ 105 (149)
T 3i4s_A 95 LHVHIIARRTG 105 (149)
T ss_dssp CCEEEEEECTT
T ss_pred EEEEEECCcCC
Confidence 99999998764
No 38
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=98.77 E-value=2.4e-07 Score=99.12 Aligned_cols=191 Identities=9% Similarity=0.042 Sum_probs=106.5
Q ss_pred CCEEEEEcCCCCCH-------------------------HHHHHH-HHHHHhhcCCCcEEEEecCCCCCChh-hHHHHHH
Q 008383 3 PPRILLCGDVLGRL-------------------------NQLFKR-VQSVNKSAGPFDAVLCVGQFFPDSSE-LLDEFMN 55 (567)
Q Consensus 3 ~~KILv~GDvhG~~-------------------------~~l~~k-v~~l~~k~GpfD~vi~~GDff~~~~~-~~~~~~~ 55 (567)
.+||++++|+|... ...+++ ++.+++ . +.|+||++||++..... ....+.+
T Consensus 39 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~d~vi~~GDl~~~~~~~~~~~~~~ 116 (443)
T 2xmo_A 39 NLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES-K-KTDVLIISGDLTNNGEKTSHEELAK 116 (443)
T ss_dssp CEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHH-H-TCSEEEEESCCBSSCCHHHHHHHHH
T ss_pred CeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHH-c-CCCEEEECCCCCCCCCHHHHHHHHH
Confidence 47999999999741 222333 333332 3 36999999999754321 1223334
Q ss_pred HhcccCCCCccEEEEccCCCChHHH-------------------HHHHhccccccCcccCCceecccEEEeCCCCeE---
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGAAKV-------------------LLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF--- 113 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~~~~-------------------~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~--- 113 (567)
++......++|+|+++||||..... +...-. ..+ ....+.--....-+
T Consensus 117 ~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~y~~~ 186 (443)
T 2xmo_A 117 KLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYS--------DFG--YEDAISSDEFSLSYLAA 186 (443)
T ss_dssp HHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTC--------CCC--CTTCSEECSSSSCEEEC
T ss_pred HHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhh--------hcC--hhhhhccCCCCceEEEe
Confidence 4432233478999999999863210 000000 000 00000000001112
Q ss_pred EEcCeEEEEEecccCC------CCCCCCCCCHHHHHHHHHhh---cCCCCccEEEeCCCCccccccccccccccccCCCC
Q 008383 114 TLHGLSVAYLSGRQSS------EGQQFGTYSQDDVDALRALA---EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSS 184 (567)
Q Consensus 114 ~~~GlrIa~lgG~~~~------~~~~~~~~t~~dv~~L~~~~---~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~ 184 (567)
..+|++|.+|...... +......+++++++.|.... ......-|+++|.+|....+.... . ...
T Consensus 187 ~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~~-----~--~~~ 259 (443)
T 2xmo_A 187 PSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQK-----G--YTI 259 (443)
T ss_dssp SBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTTCEEEEECSSBSSCSSCC--C-----C--SBC
T ss_pred cCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcCCeEEEEECCCCccccccccc-----c--ccc
Confidence 2468999998766422 11223456788877776532 112334599999999876321110 0 113
Q ss_pred CCcHHHHHHHHHhCCCEEEEccCCCccc
Q 008383 185 NTDSTVSELVAEIKPRYHIAGSKGVFYA 212 (567)
Q Consensus 185 ~Gs~~i~~l~~~lkPRYhf~Gh~~~fyE 212 (567)
.+...+.++++..+++++|+||.|....
T Consensus 260 ~~~~~l~~ll~~~~v~lvl~GH~H~~~~ 287 (443)
T 2xmo_A 260 NYNQQVIDALTEGAMDFSLSGHIHTQNI 287 (443)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSSCSCEE
T ss_pred ccHHHHHHHHHHcCCeEEEECCcccCch
Confidence 4678899999999999999999886543
No 39
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=98.76 E-value=3.8e-08 Score=99.19 Aligned_cols=205 Identities=11% Similarity=0.018 Sum_probs=110.8
Q ss_pred CCEEEEEcCCCCCH---------HHHHHHHHHHHhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhccc---CCC-Ccc
Q 008383 3 PPRILLCGDVLGRL---------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGR---SEI-PIP 66 (567)
Q Consensus 3 ~~KILv~GDvhG~~---------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~---~~~~~~~~~~l~g~---~~~-p~p 66 (567)
.+||+++||+|... ..+.+.+..+.++. +.|+||++||++... .....++.+.+... ..+ ++|
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~-~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~p 84 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTL-GADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 84 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHH-CCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhc-CCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcCCC
Confidence 58999999999863 34555555543333 479999999985321 11111333333211 124 789
Q ss_pred EEEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEE------cCeEEEEEecccCCC----------
Q 008383 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL------HGLSVAYLSGRQSSE---------- 130 (567)
Q Consensus 67 tyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~------~GlrIa~lgG~~~~~---------- 130 (567)
+|+++||||........+.-.. ....+..++.+|. +.+ ++++|.+|.......
T Consensus 85 ~~~v~GNHD~~~~~~~~~~~~~------~~~~~~~~~~~y~-----~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 153 (313)
T 1ute_A 85 WHVLAGNHDHLGNVSAQIAYSK------ISKRWNFPSPYYR-----LRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 153 (313)
T ss_dssp EEECCCHHHHHSCHHHHHHGGG------TSTTEECCSSSEE-----EEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred EEEECCCCccCCCccccccccc------cCCCccCcccceE-----EEEecCCCCceEEEEEEEChHHhCcCcccccccc
Confidence 9999999985322222111000 0011111221111 122 367777776543100
Q ss_pred -CCCCCCCCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCC
Q 008383 131 -GQQFGTYSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKG 208 (567)
Q Consensus 131 -~~~~~~~t~~dv~~L~~-~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~ 208 (567)
......+.+++++.|.+ +.......-|+++|.+|......... ..-...+.+++++.+..+.|+||.|
T Consensus 154 ~~~~~~~~~~~q~~wL~~~L~~~~~~~~iv~~H~p~~~~~~~~~~----------~~~~~~l~~~l~~~~v~~~l~GH~H 223 (313)
T 1ute_A 154 ERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPT----------HCLVKQLLPLLTTHKVTAYLCGHDH 223 (313)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHHCCCSEEEEECSSCSSCCSSSCCC----------HHHHHHTHHHHHHTTCSEEEECSSS
T ss_pred CCccccchHHHHHHHHHHHHHhCCCCeEEEEECCCCccCCCCCCc----------HHHHHHHHHHHHHcCCcEEEECChh
Confidence 00011223555666665 33333467899999999865321110 0012456777888899999999988
Q ss_pred CccccccccCCCCcceeEEEEccCCCC
Q 008383 209 VFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 209 ~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.+.-.. ....+.+|+.|..+.
T Consensus 224 ~~~~~~------~~~g~~~i~~gs~~~ 244 (313)
T 1ute_A 224 NLQYLQ------DENGLGFVLSGAGNF 244 (313)
T ss_dssp SEEEEE------CTTCCEEEEECBSSC
T ss_pred hhhhcc------CCCCceEEEECCCcC
Confidence 542211 122578888887764
No 40
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=98.71 E-value=2.5e-08 Score=103.23 Aligned_cols=219 Identities=11% Similarity=0.107 Sum_probs=104.5
Q ss_pred CCCCEEEEEcCCC-C----CH----------HHHHHHHHHHHhhcCCCcEEEEecC-CCCCCh---hhHHHHHHHhcccC
Q 008383 1 MSPPRILLCGDVL-G----RL----------NQLFKRVQSVNKSAGPFDAVLCVGQ-FFPDSS---ELLDEFMNYVEGRS 61 (567)
Q Consensus 1 M~~~KILv~GDvh-G----~~----------~~l~~kv~~l~~k~GpfD~vi~~GD-ff~~~~---~~~~~~~~~l~g~~ 61 (567)
|..||||.++|+| | +. ...++++-....+. ..|+||++|| +|.... .....+.+++....
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~-~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHH-TCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHh-CCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 3469999999999 7 31 23444443332233 4799999999 876422 22223444443322
Q ss_pred CCCccEEEEccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeE---EE--cCeEEEEEecccCCCCCC--C
Q 008383 62 EIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF---TL--HGLSVAYLSGRQSSEGQQ--F 134 (567)
Q Consensus 62 ~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~---~~--~GlrIa~lgG~~~~~~~~--~ 134 (567)
.. +|+|+|+||||... +..... . -....+|+++++..... .+ +++.|.++.......... .
T Consensus 95 ~~-~pv~~i~GNHD~~~--~~~~~~--~-------l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 95 RT-APVVVLPGNHDWKG--LKLFGN--F-------VTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HH-SCEEECCC--------CHHHHH--H-------HHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCS
T ss_pred hc-CCEEEECCCCCccc--cccHHH--H-------HHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 22 79999999998653 221110 0 00012568888765432 12 356677664332110000 0
Q ss_pred CCCCHHHHHHHH-Hhhc---CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCc
Q 008383 135 GTYSQDDVDALR-ALAE---EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210 (567)
Q Consensus 135 ~~~t~~dv~~L~-~~~~---~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~f 210 (567)
..| ++.++.+. .+.. ......||++|.++.+.... +.. .......+...+......|.++||.|..
T Consensus 163 ~~~-~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~-~~~--------~~~~~~~v~~~l~~~~~d~v~~GH~H~~ 232 (336)
T 2q8u_A 163 GDF-RFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY-AGI--------EQGREIIINRALIPSVVDYAALGHIHSF 232 (336)
T ss_dssp SHH-HHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------------CCCEECGGGSCTTSSEEEEESCSSC
T ss_pred HHH-HHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC-CCc--------cchhhcccCHHHccccCCEEEEccccCc
Confidence 011 22233322 2221 24567899999999876321 000 0000001111122246789999998876
Q ss_pred cccccccCCCCcceeEEEEccCCCC----c-ccceeEEEeccCCC
Q 008383 211 YAREPYSNVDAVHVTRFLGLAPVGN----K-EKQKFIHALSPTPA 250 (567)
Q Consensus 211 yEr~Py~~~~~~~~TRFI~L~~~g~----~-~K~Kw~yAf~i~p~ 250 (567)
.... ..+++++.|.... . ...|.+.-+++.+.
T Consensus 233 ~~~~--------~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~~~ 269 (336)
T 2q8u_A 233 REIQ--------KQPLTIYPGSLIRIDFGEEADEKGAVFVELKRG 269 (336)
T ss_dssp EEEE--------ETTEEEECCCSSCCSGGGTTCCCEEEEEEEETT
T ss_pred eEeC--------CCccEEECCCCcCCCccccCCCCEEEEEEEeCC
Confidence 4321 1146677665421 1 11355555666543
No 41
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.71 E-value=4.3e-08 Score=103.57 Aligned_cols=203 Identities=13% Similarity=0.031 Sum_probs=106.0
Q ss_pred CCCEEEEEcCCCCCHH------------HHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHHHHHHHhcccCCCCcc
Q 008383 2 SPPRILLCGDVLGRLN------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLDEFMNYVEGRSEIPIP 66 (567)
Q Consensus 2 ~~~KILv~GDvhG~~~------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~~~~~~l~g~~~~p~p 66 (567)
..||||+++|+|.... ..++++-....+. ..|+||++||+|.... .....+.+++......++|
T Consensus 19 ~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~-~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEI-KPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHc-CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 4699999999997621 2233322222223 4799999999986532 1222344444333334789
Q ss_pred EEEEccCCCChHHHHHHHhccccccCcccCCc-eecccEEEeCCCCeEEE--cCeEEEEEecccCCCCCCCCCCCHHHH-
Q 008383 67 TYFIGDYGVGAAKVLLAASKNSANQGFKMDGF-KVTDNLFWLKGSGNFTL--HGLSVAYLSGRQSSEGQQFGTYSQDDV- 142 (567)
Q Consensus 67 tyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~-~i~~Nl~~Lg~~gv~~~--~GlrIa~lgG~~~~~~~~~~~~t~~dv- 142 (567)
+|+|.||||.....-. . ... .+..++.+|+...++.. .++.|.+++.... ....++
T Consensus 98 v~~v~GNHD~~~~~~~-~-----------~~~~~l~~~v~~l~~~~v~~~~~~~v~i~gl~~~~~--------~~~~~~~ 157 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGE-E-----------SPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKK--------SKREEML 157 (386)
T ss_dssp EEECCCGGGSCSSTTS-C-----------CGGGGGTTTCEECSEEEEEEETTEEEEEEEECCCCS--------TTHHHHH
T ss_pred EEEEcCCCCCCccccc-c-----------CHHHHHHHHeEEcCCCcEEEeCCCCEEEEeCCCCCH--------HHHHHHH
Confidence 9999999985421000 0 000 01222455554333222 4566766654321 112222
Q ss_pred HHHHHhhc--CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC
Q 008383 143 DALRALAE--EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD 220 (567)
Q Consensus 143 ~~L~~~~~--~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~ 220 (567)
+.|..+.. ......||++|.++.++... . .... +..+ -+..|+++||.|.. ...++
T Consensus 158 ~~l~~l~~~~~~~~~~Ill~H~~~~~~~~~-~----------~~~~---~~~l---~~~d~v~~GH~H~~-~~~~~---- 215 (386)
T 3av0_A 158 DKLKNFESEAKNYKKKILMLHQGINPYIPL-D----------YELE---HFDL---PKFSYYALGHIHKR-ILERF---- 215 (386)
T ss_dssp HHHHHHHHHHHTCSSEEEEECCCCTTTSSS-S----------CSSC---GGGS---CCCSEEEECSCCSC-EEEEC----
T ss_pred HHHHHhhhhcccCCCEEEEECcCccccCCC-C----------cccC---HHHh---hhCCeEEccCCCCC-ccccC----
Confidence 22332211 13568899999998765220 0 0000 1111 13789999998876 23221
Q ss_pred CcceeEEEEccCCCC-c--c------cceeEEEeccCC
Q 008383 221 AVHVTRFLGLAPVGN-K--E------KQKFIHALSPTP 249 (567)
Q Consensus 221 ~~~~TRFI~L~~~g~-~--~------K~Kw~yAf~i~p 249 (567)
..+.+++.|.... . + ..|-++-+.+..
T Consensus 216 --~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~ 251 (386)
T 3av0_A 216 --NDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSG 251 (386)
T ss_dssp --SSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCS
T ss_pred --CCceEEECCcccccCcchhccccCCCCEEEEEEEec
Confidence 2467888877632 1 1 135566666654
No 42
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.64 E-value=1.2e-07 Score=90.34 Aligned_cols=139 Identities=9% Similarity=0.043 Sum_probs=81.1
Q ss_pred CCEEEEEcCCCCCHHH------------HHHHH-HHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEE
Q 008383 3 PPRILLCGDVLGRLNQ------------LFKRV-QSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYF 69 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~------------l~~kv-~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyf 69 (567)
.|||++++|+|..... +.+++ +.+++...+.|+||++||++..... ..++.+++ ..++.|+|+
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~~-~~~~~~~l---~~l~~~~~~ 76 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND-KNEYLRIW---KALPGRKIL 76 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC-TTSHHHHH---HHSSSEEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCchh-HHHHHHHH---HHCCCCEEE
Confidence 4899999999954321 22232 2333322468999999999754211 22344454 234568999
Q ss_pred EccCCCChHHHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHHHHhh
Q 008383 70 IGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDALRALA 149 (567)
Q Consensus 70 v~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L~~~~ 149 (567)
|.||||.... .+. ..+ . .+..+.. |..
T Consensus 77 v~GNhD~~~~---~~~-----------~~~-----------~--~l~~~~~------------------------l~~-- 103 (195)
T 1xm7_A 77 VMGNHDKDKE---SLK-----------EYF-----------D--EIYDFYK------------------------IIE-- 103 (195)
T ss_dssp ECCTTCCCHH---HHT-----------TTC-----------S--EEESSEE------------------------EEE--
T ss_pred EeCCCCCchh---hhh-----------hhh-----------h--chhHHHH------------------------HHh--
Confidence 9999986421 111 000 0 0000000 000
Q ss_pred cCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 150 EEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 150 ~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
..+..|+++|.+|....... ...+...+.+++....+.+.++||.|..+
T Consensus 104 --~~~~~i~~~H~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~vi~GHtH~~~ 152 (195)
T 1xm7_A 104 --HKGKRILLSHYPAKDPITER-----------YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (195)
T ss_dssp --ETTEEEEEESSCSSCSSCCS-----------CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred --cCCcEEEEEccCCcCCCccc-----------ccchHHHHHHHHHHcCCcEEEECCcCCCC
Confidence 02468999999987653210 01346788888888899999999988654
No 43
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.64 E-value=1.2e-08 Score=96.48 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=43.2
Q ss_pred CEEEEEcCCCC--CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 4 PRILLCGDVLG--RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 4 ~KILv~GDvhG--~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
|||++++|+|| +...+.+.++.+. .+.|+||++||++.. ++.+++. +.+.|+|+|.||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~---~~~D~ii~~GD~~~~------~~~~~l~---~~~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL---KEYDGVIGLGDYVDL------DTVILLE---KFSKEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG---GGCSEEEESSCBSCH------HHHHHHH---HHTSSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh---cCCCEEEECCCCCCH------HHHHHHH---hcCCCEEEEECCCCcH
Confidence 79999999997 5554444444443 247999999999862 2333432 2236899999999853
No 44
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.62 E-value=8.9e-08 Score=101.02 Aligned_cols=215 Identities=11% Similarity=0.083 Sum_probs=110.2
Q ss_pred CEEEEEcCCCCCHH---------------HHHHHHHHHHhhcCCCcEEEEecCCC-CC---ChhhHHHHHHHhcccCCCC
Q 008383 4 PRILLCGDVLGRLN---------------QLFKRVQSVNKSAGPFDAVLCVGQFF-PD---SSELLDEFMNYVEGRSEIP 64 (567)
Q Consensus 4 ~KILv~GDvhG~~~---------------~l~~kv~~l~~k~GpfD~vi~~GDff-~~---~~~~~~~~~~~l~g~~~~p 64 (567)
||||+++|+|.... ..++++..+..+. ..|+||++||+| .. .......+.+++......
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~-~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~- 78 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR-EVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRT- 78 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHH-TCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHH-
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhc-CCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhC-
Confidence 79999999997543 3445544443333 379999999999 42 222223344444333344
Q ss_pred ccEEEEccCCCChHH-HHHHHhccccccCcccCCceecccEEEeCCCCeEEE---cC--eEEEEEecccCCCCCCCCCCC
Q 008383 65 IPTYFIGDYGVGAAK-VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL---HG--LSVAYLSGRQSSEGQQFGTYS 138 (567)
Q Consensus 65 ~ptyfv~GN~~~~~~-~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~---~G--lrIa~lgG~~~~~~~~~~~~t 138 (567)
+|+|+|.||||.... ++..+. ..+.+|+.++.....+.+ .| +.|.++...... .....+.
T Consensus 79 ~~v~~i~GNHD~~~~~~~~~~~------------~~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~--~~~~~~~ 144 (379)
T 3tho_B 79 APVVVLPGNQDWKGLKLFGNFV------------TSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDES--EALRKNE 144 (379)
T ss_dssp SCEEECCCTTSCTTHHHHHHHH------------HTTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC------CHH
T ss_pred CCEEEEcCCCccccCccccccc------------cccCCcceeecccceEEEEcCCCCEEEEEECCCCCHH--HHhhhhc
Confidence 899999999995431 222221 123467766654444443 35 566666543221 1111122
Q ss_pred HHHHHHHHH-------hhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcc
Q 008383 139 QDDVDALRA-------LAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFY 211 (567)
Q Consensus 139 ~~dv~~L~~-------~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fy 211 (567)
.+..+.+.. .......+.|+++|..+.|....+... .... ..+...+......|+++||.|...
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se--------~~~~-~~v~~~~~~~~~dyvalGH~H~~q 215 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE--------QGRE-IIINRALIPSVVDYAALGHIHSFR 215 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------------CS-CCBCGGGSCTTSSEEEEESCSSCE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCc--------cccc-cccCHHHcCcCCCEEEcccccCCe
Confidence 222222211 111246789999999988753211100 0000 111111112467999999988762
Q ss_pred ccccccCCCCcceeEEEEccCCCC----ccc-ceeEEEeccCCCC
Q 008383 212 AREPYSNVDAVHVTRFLGLAPVGN----KEK-QKFIHALSPTPAA 251 (567)
Q Consensus 212 Er~Py~~~~~~~~TRFI~L~~~g~----~~K-~Kw~yAf~i~p~~ 251 (567)
.. ....+++..|.... ... .|.++-+.+.+..
T Consensus 216 ~~--------~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~~~ 252 (379)
T 3tho_B 216 EI--------QKQPLTIYPGSLIRIDFGEEADEKGAVFVELKRGE 252 (379)
T ss_dssp EE--------EETTEEEECCCSSCCSGGGSSSCCEEEEEECCSSS
T ss_pred Ee--------CCCCcEEecCCCCCCCcccccCCCEEEEEEEcCCC
Confidence 21 11135666665521 112 3666777776543
No 45
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.50 E-value=7.9e-07 Score=91.84 Aligned_cols=73 Identities=18% Similarity=0.234 Sum_probs=47.8
Q ss_pred CEEEEEcCCCCCHH------------HHHHHHHHHHhhcCCCcEEEEecCCCCCC---hhhHHHHHHHhcccCCCCccEE
Q 008383 4 PRILLCGDVLGRLN------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDS---SELLDEFMNYVEGRSEIPIPTY 68 (567)
Q Consensus 4 ~KILv~GDvhG~~~------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~---~~~~~~~~~~l~g~~~~p~pty 68 (567)
|||++++|+|.... ..++++-.+..+. ..|+||++||+|... ......+.+++......++|+|
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~ 79 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE-NVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVF 79 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT-TCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhc-CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEE
Confidence 79999999998642 2333333322233 479999999998642 1223344444443345578999
Q ss_pred EEccCCCCh
Q 008383 69 FIGDYGVGA 77 (567)
Q Consensus 69 fv~GN~~~~ 77 (567)
+|.||||..
T Consensus 80 ~v~GNHD~~ 88 (333)
T 1ii7_A 80 AIEGNHDRT 88 (333)
T ss_dssp EECCTTTCC
T ss_pred EeCCcCCCc
Confidence 999999964
No 46
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=98.40 E-value=3.8e-07 Score=87.32 Aligned_cols=86 Identities=6% Similarity=0.052 Sum_probs=63.2
Q ss_pred EEEECCEEEEEecCCCCCCCeEEEEeccccCCCCCCC------HHHHHHHHHHHH-H-HHHHHHh-----------cCC-
Q 008383 405 IVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTS------PECEKELGRFQN-S-LMMYYKN-----------QGK- 464 (567)
Q Consensus 405 iis~g~~~yl~l~kgpl~~gH~LIiP~~H~~s~~~~~------~~~~~E~~~~~~-~-L~~~~~~-----------~g~- 464 (567)
||++++.++++++..|.++||+||||++|+.++.... .++..+|..+.. . |.+++.. .|+
T Consensus 23 ~v~edd~~~af~D~~P~a~~H~LVIPk~h~~~~~~p~~al~d~~~Ll~~m~~la~~~~l~~~~~~~~~~~~~~~~~~~~~ 102 (204)
T 3sp4_A 23 VIYYDDDVVLVRDMFPKSKMHLLLMTRDPHLTHVHPLEIMMKHRSLVEKLVSYVQGDLSGLIFDEARNCLSQQLTNEALC 102 (204)
T ss_dssp EEEECSSEEEEECSSCSSSSEEEEEECCTTTTTSCHHHHHHHCHHHHHHHHHHHHTTTHHHHHHHHHHHSCTTCCHHHHH
T ss_pred EEEEcCCEEEEeCCCCCCCccEEEEeccccCcccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCCcCCee
Confidence 8999999999999999999999999999999988642 356777777766 4 5555531 121
Q ss_pred ceEEEE-ecCCCCCeeEEEEeecCcch
Q 008383 465 EAVFFE-WLSKRGTHANLQAVPIPTSK 490 (567)
Q Consensus 465 ~~v~~E-~~~~~~~H~hi~~vPvp~~~ 490 (567)
..+-+. .+.....|+|+|||-.+..-
T Consensus 103 ~~i~~GfHa~PSm~HLHLHVIS~Df~s 129 (204)
T 3sp4_A 103 NYIKVGFHAGPSMNNLHLHIMTLDHVS 129 (204)
T ss_dssp TTEEEEEESSCSSSSCCEEEEESCCCC
T ss_pred eeEeccCCCCCcccceeEEEeccCCCC
Confidence 123333 23344679999999876653
No 47
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.31 E-value=1.1e-06 Score=84.81 Aligned_cols=69 Identities=9% Similarity=0.151 Sum_probs=50.0
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||++++|+||++..+-+.++.+++. +.|+||++||++..... ...++.+++ .+++.|+|+|.||||.
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l---~~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERL---NEVAHKVIAVRGNCDS 100 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHH---HTTGGGEEECCCTTCC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhc--CCCEEEECCCccccCcccccccccCHHHHHHHH---HhcCCceEEEECCCch
Confidence 79999999999988776666666543 36999999999753221 124455555 3445799999999986
Q ss_pred h
Q 008383 77 A 77 (567)
Q Consensus 77 ~ 77 (567)
.
T Consensus 101 ~ 101 (208)
T 1su1_A 101 E 101 (208)
T ss_dssp H
T ss_pred H
Confidence 4
No 48
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=98.30 E-value=1e-05 Score=86.25 Aligned_cols=205 Identities=12% Similarity=0.034 Sum_probs=112.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~------~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.+||+++||.|.... ..+.++.+.+.....|+||++||+.-.+. ...+++.++++.. ...+|+|++.||||.
T Consensus 126 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l-~~~~P~~~v~GNHD~ 203 (426)
T 1xzw_A 126 PYVFGLIGDIGQTHD-SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS-VAYQPWIWTAGNHEI 203 (426)
T ss_dssp CEEEEEECSCTTBHH-HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH-HTTSCEECCCCGGGC
T ss_pred CeEEEEEEeCCCCCc-hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHH-HhcCCEEEecccccc
Confidence 479999999998743 23345555544335899999999974321 1122344444332 237899999999985
Q ss_pred hHH-----------HHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHH
Q 008383 77 AAK-----------VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDAL 145 (567)
Q Consensus 77 ~~~-----------~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L 145 (567)
... +...... +..+.....+.+ -.+..++++|.+|...... . ...++.+.|
T Consensus 204 ~~~~~~~~~~~~~~~~~~f~~-------p~~~~~~~~~~~-----ys~~~g~~~~i~Ldt~~~~-----~-~~~~Q~~WL 265 (426)
T 1xzw_A 204 DYAPDIGEYQPFVPFTNRYPT-------PHEASGSGDPLW-----YAIKRASAHIIVLSSYSGF-----V-KYSPQYKWF 265 (426)
T ss_dssp CCBGGGTBCSTTHHHHHHSCC-------CCGGGTCSSTTS-----EEEEETTEEEEECCTTSCC-----S-TTSHHHHHH
T ss_pred ccCCccccccCChhheEEEeC-------CcccCCCCCCCe-----EEEEECCEEEEEeeCcccC-----C-CCHHHHHHH
Confidence 321 1111000 000000001111 1234678888888643210 1 123445555
Q ss_pred HH-hhcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCccccccccCCC-
Q 008383 146 RA-LAEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVD- 220 (567)
Q Consensus 146 ~~-~~~~---~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~~~~- 220 (567)
++ ++.. ..+--|+++|.++......... ....-...+.+++.+.+....|+||.|.+.-..|..+..
T Consensus 266 ~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~--------~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~ 337 (426)
T 1xzw_A 266 TSELEKVNRSETPWLIVLVHAPLYNSYEAHYM--------EGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAY 337 (426)
T ss_dssp HHHHHHCCTTTCCEEEEECSSCSSCCBSTTTT--------TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCC
T ss_pred HHHHHhhhhcCCCEEEEEeccCceeCCCcccC--------CCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccc
Confidence 54 2221 2345699999998754211000 000013466778888999999999998765555644321
Q ss_pred -----------CcceeEEEEccCCCC
Q 008383 221 -----------AVHVTRFLGLAPVGN 235 (567)
Q Consensus 221 -----------~~~~TRFI~L~~~g~ 235 (567)
....|.+|..|.-|+
T Consensus 338 ~~~~g~~~~~~~~~g~~yi~~G~gG~ 363 (426)
T 1xzw_A 338 NIVNAKCTPVSDESAPVYITIGDGGN 363 (426)
T ss_dssp CSTTCCCCCEECTTSCEEEEECCSCC
T ss_pred cccCCccccccCCCccEEEEeCCCcc
Confidence 134577887777665
No 49
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.23 E-value=3.7e-05 Score=84.14 Aligned_cols=211 Identities=11% Similarity=0.006 Sum_probs=109.1
Q ss_pred CCEEEEEcCCCCCHH----------HHHHHHHHHHhh---cCCCcEEEEecCCCCCChh----hHHHHHHHhcccCCCCc
Q 008383 3 PPRILLCGDVLGRLN----------QLFKRVQSVNKS---AGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------~l~~kv~~l~~k---~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g~~~~p~ 65 (567)
.++||.++|+||++. .+...++++.+. .+|-+++|.+||++..... ..+.+.+.+ ..++
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~l---n~lg- 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGM---NLVG- 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHH---HHHT-
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHH---hccC-
Confidence 478999999999743 333444444332 2456899999999754221 011122222 2233
Q ss_pred cEEEEccCCCChH---HHHHHHhccccccCcccCCceecccEEEe-------CCCCeEEEcCeEEEEEecccCCCCC--C
Q 008383 66 PTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWL-------KGSGNFTLHGLSVAYLSGRQSSEGQ--Q 133 (567)
Q Consensus 66 ptyfv~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~L-------g~~gv~~~~GlrIa~lgG~~~~~~~--~ 133 (567)
+.+++.||||... .+...+.. .+-..++.|++.- ...-+++.+|++|+.+|-....... .
T Consensus 84 ~d~~~~GNHEfd~g~~~l~~~~~~--------~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 155 (516)
T 1hp1_A 84 YDAMAIGNHEFDNPLTVLRQQEKW--------AKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGN 155 (516)
T ss_dssp CCEEECCGGGGSSCHHHHHHHHHH--------CSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSS
T ss_pred CCEEeeccccccCCHHHHHHHHhh--------CCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccC
Confidence 3488999998632 12222221 1123567787642 1224557899999999865432110 0
Q ss_pred C-----CCCC--HHHHHH-HHHhhc-CCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEE
Q 008383 134 F-----GTYS--QDDVDA-LRALAE-EPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIA 204 (567)
Q Consensus 134 ~-----~~~t--~~dv~~-L~~~~~-~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~ 204 (567)
+ ..|. .+.++. +..+.. ....+=|+|+|........... ...+...+++.+...++...++
T Consensus 156 p~~~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~~~----------~~~~~~~la~~~~~~~iDlilg 225 (516)
T 1hp1_A 156 PEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGS----------NAPGDVEMARALPAGSLAMIVG 225 (516)
T ss_dssp CCSCTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCCTT----------SCCCHHHHHHHSCTTSSSEEEC
T ss_pred cCccCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcccc----------cCchHHHHHHhCCCCceeEEEC
Confidence 0 1222 122332 222221 1223447889977654321100 1133444433333334789999
Q ss_pred ccCCCcccc-------ccccCC-----CCcceeEEEEccCCCC
Q 008383 205 GSKGVFYAR-------EPYSNV-----DAVHVTRFLGLAPVGN 235 (567)
Q Consensus 205 Gh~~~fyEr-------~Py~~~-----~~~~~TRFI~L~~~g~ 235 (567)
||.|..+.. .+|... .....|-++..|.+|.
T Consensus 226 GHtH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ag~~g~ 268 (516)
T 1hp1_A 226 GHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGK 268 (516)
T ss_dssp CSSCCBCCEEETTEECSSCCTTSCCCCEEETTEEEECBCSTTS
T ss_pred CCCCcccccCCccccccccCCCccccccCCCCcEEEecChhhh
Confidence 998876542 111110 0123578888888775
No 50
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=98.19 E-value=1.8e-05 Score=84.34 Aligned_cols=187 Identities=13% Similarity=0.068 Sum_probs=101.9
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~------~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.+||+++||.|..... .+.++.+.+.....|+||++||+.-.+. ...+++.++++.. ...+|+|++.||||.
T Consensus 119 ~~~f~~igD~~~~~~~-~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~-~~~~P~~~v~GNHD~ 196 (424)
T 2qfp_A 119 PYTFGLIGDLGQSFDS-NTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS-VAYQPWIWTAGNHEI 196 (424)
T ss_dssp CEEEEEECSCTTBHHH-HHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH-HTTSCEEECCCHHHH
T ss_pred CeEEEEEEeCCCCCCh-HHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH-HhcCCeEeecCCccc
Confidence 5799999999987643 3345556554335799999999975421 1123344444332 235899999999983
Q ss_pred hH-----------HHHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecccCCCCCCCCCCCHHHHHHH
Q 008383 77 AA-----------KVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDAL 145 (567)
Q Consensus 77 ~~-----------~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~~~~~~~~~~~~t~~dv~~L 145 (567)
.. .+...+.. +..+.....+++ -.+++++++|.+|..... ...++ ++.+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~f~~-------P~~~~~~~~~~~-----ys~~~g~~~~i~Ldt~~~-----~~~~~-~Q~~WL 258 (424)
T 2qfp_A 197 EFAPEINETEPFKPFSYRYHV-------PYEASQSTSPFW-----YSIKRASAHIIVLSSYSA-----YGRGT-PQYTWL 258 (424)
T ss_dssp CCBGGGTBCSTTHHHHHHCCC-------CGGGGTCSSTTS-----EEEEETTEEEEECCTTSC-----CSTTS-HHHHHH
T ss_pred ccCCcccccccchhhhhhccC-------CccccCCCCCcE-----EEEEECCEEEEEecCCcc-----CCCcH-HHHHHH
Confidence 21 00010000 000000001111 134567888888854321 11223 345555
Q ss_pred HH-hhcC---CCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCEEEEccCCCcccccccc
Q 008383 146 RA-LAEE---PGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYS 217 (567)
Q Consensus 146 ~~-~~~~---~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRYhf~Gh~~~fyEr~Py~ 217 (567)
++ ++.. ..+.-|+++|.++........ . ....-...+..++.+.+..+.|+||.|.|--..|..
T Consensus 259 ~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~----~----~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~ 326 (424)
T 2qfp_A 259 KKELRKVKRSETPWLIVLMHSPLYNSYNHHF----M----EGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVS 326 (424)
T ss_dssp HHHHHHCCTTTCCEEEEECSSCSSCCBSTTT----T----TTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEE
T ss_pred HHHHhhhcccCCCEEEEEeCcCceecCcccc----c----ccHHHHHHHHHHHHHhCCcEEEECChhhhheecccc
Confidence 54 2221 234579999998875421100 0 000012456678888999999999998754444543
No 51
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=98.04 E-value=7.6e-06 Score=85.06 Aligned_cols=212 Identities=10% Similarity=0.009 Sum_probs=110.2
Q ss_pred CCEEEEEcCCCCCH---HHHHHHHHHHHhhcCCCcEEEEecCCCCCCh------hhHHHHHHHhccc-CCCCccEEEEcc
Q 008383 3 PPRILLCGDVLGRL---NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS------ELLDEFMNYVEGR-SEIPIPTYFIGD 72 (567)
Q Consensus 3 ~~KILv~GDvhG~~---~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~------~~~~~~~~~l~g~-~~~p~ptyfv~G 72 (567)
+++++++||.+..- ..+.+.+.++.++. ++|+||.+||++-.+. .-.+.+...+... ....+|+|.+.|
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~-~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNE-RVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHT-TCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhc-CCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 57999999999742 22334444444444 5899999999864321 1112333344332 356899999999
Q ss_pred CCCChHHHHHHHhccc--------------cccCcccCCceecccEEEeCCCCeEEE--------cC-----eEEEEEec
Q 008383 73 YGVGAAKVLLAASKNS--------------ANQGFKMDGFKVTDNLFWLKGSGNFTL--------HG-----LSVAYLSG 125 (567)
Q Consensus 73 N~~~~~~~~~~l~~~~--------------~~~~~~~~~~~i~~Nl~~Lg~~gv~~~--------~G-----lrIa~lgG 125 (567)
|||-.......+.-.. ... -.....|..|+.+|--.. .+++ .| ++|.+|--
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~-~~~~~rw~~P~~yY~~~~-~f~~~~~~~~~~~g~~~~~v~fi~LDT 159 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDAD-ATNYPKWIMPNYWYHYFT-HFTVSSGPSIVKTGHKDLAAAFIFIDT 159 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------C-CCSSCEEECSSSSEEEEE-EEEEC---------CEEEEEEEEECCT
T ss_pred CCccCCCchHhhhhhhccccccccccccccccc-ccCCCCccCCcceEEEEE-EeeccccccccccCCCCceEEEEEEeC
Confidence 9974322222111000 000 012345666766542100 0111 23 45555533
Q ss_pred ccCCCCCCC----CCCCHHHHHHHHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHhCCCE
Q 008383 126 RQSSEGQQF----GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEIKPRY 201 (567)
Q Consensus 126 ~~~~~~~~~----~~~t~~dv~~L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~lkPRY 201 (567)
......... ..+.++..+.|+...+ ....=|++.|.++.......+. ..-...+..|+.+.+...
T Consensus 160 ~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~-~~~~~IV~~HhP~~~~~~~~~~----------~~l~~~l~~ll~~~~Vdl 228 (342)
T 3tgh_A 160 WVLSSNFPYKKIHEKAWNDLKSQLSVAKK-IADFIIVVGDQPIYSSGYSRGS----------SYLAYYLLPLLKDAEVDL 228 (342)
T ss_dssp TTTSTTCSCHHHHHHHHHHHHHHHHHHHH-HCSEEEEECSSCSSCSSTTCCC----------HHHHHHTHHHHHHTTCCE
T ss_pred cccccCCcccccchHHHHHHHHHHHHhhc-cCCcEEEEECCCCCCCCCCCCc----------HHHHHHHHHHHHHcCCCE
Confidence 211111000 0111233444443221 2346689999999765322110 011356778899999999
Q ss_pred EEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 202 HIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 202 hf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.|+||.|.+.-.. ...+.+|..|..+.
T Consensus 229 vlsGH~H~~~~~~-------~~g~~~iv~Ga~g~ 255 (342)
T 3tgh_A 229 YISGHDNNMEVIE-------DNDMAHITCGSGSM 255 (342)
T ss_dssp EEECSSSSEEEEE-------ETTEEEEEECCSSC
T ss_pred EEECCCcceeEEe-------eCCcEEEEeCcccc
Confidence 9999988653322 11388888887654
No 52
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.01 E-value=8.3e-05 Score=81.62 Aligned_cols=205 Identities=8% Similarity=0.022 Sum_probs=110.5
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhH---------HHHHHHh
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELL---------DEFMNYV 57 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~---------~~~~~~l 57 (567)
+++||.++|+||++. .+...++++.+++ |-.++|.+||++....... ..+.+.+
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~l 97 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQY-DQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFY 97 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTS-SEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcC-CCEEEEECCCcCCCcHHHHHHhhcccCcchHHHHH
Confidence 478999999999863 5555566665543 4457788999986542110 2222333
Q ss_pred cccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEeC------CCCeEEEcCeEEEEEecccC
Q 008383 58 EGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK------GSGNFTLHGLSVAYLSGRQS 128 (567)
Q Consensus 58 ~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg------~~gv~~~~GlrIa~lgG~~~ 128 (567)
..++.. +++.||||.. ..+.+.+.. .+-..++.|++..+ ..-+++.+|++|+.+|-...
T Consensus 98 ---n~lg~D-~~t~GNHefd~G~~~l~~~~~~--------~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 98 ---NRMAFD-FGTLGNHEFNYGLPYLKDTLRR--------LNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp ---HHTCCC-EECCCGGGGTTCHHHHHHHHHH--------CSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred ---HhcCCc-EEeccccccccCHHHHHHHHHh--------CCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 334443 6778999843 223333321 12235778887531 23455689999999987643
Q ss_pred CCCC-C------CCCCC--HHHHHH-HHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh-
Q 008383 129 SEGQ-Q------FGTYS--QDDVDA-LRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI- 197 (567)
Q Consensus 129 ~~~~-~------~~~~t--~~dv~~-L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l- 197 (567)
.... . -..|. .+.++. +..+. ..-.+-|+|+| |+......... +. ....|.....+|++++
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H-~G~~~d~~~~~---~~---~~~~~e~~~~~la~~~~ 237 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYH-GGFEKDLESGT---PT---EVLTGENEGYAMLEAFS 237 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEE-CCCSBCTTTCC---BS---SCCSSSCCHHHHHHHHG
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeC-cCcccccccCc---cc---cccccchHHHHHHHhcC
Confidence 2110 0 01222 122222 22221 11234478888 44322110000 00 0112333455667666
Q ss_pred -CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 198 -KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 198 -kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
.....++||.|..+.. ....|..+..|..|.
T Consensus 238 ~giDlIlgGHtH~~~~~-------~v~~~~ivqag~~g~ 269 (527)
T 3qfk_A 238 KDIDIFITGHQHRQIAE-------RFKQTAVIQPGTRGT 269 (527)
T ss_dssp GGCSEEECCSSCCEEEE-------EETTEEEEEECSTTS
T ss_pred CCCcEEEECCCCcccce-------EECCEEEeccChhhC
Confidence 6789999999876541 234588888888775
No 53
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.93 E-value=6.6e-06 Score=79.69 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=48.5
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
.|||+|+||+||++..|.+.++.+... ...|.+|++||+....... .+..+++. . .++++|.||||.
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~~i~~GD~~~~g~~~-~~~~~~l~---~--~~~~~v~GNhd~ 78 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGAEN-VECLELIT---F--PWFRAVRGNHEQ 78 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSSCH-HHHHGGGG---S--TTEEECCCHHHH
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCC-CCCCEEEEeCCccCCCCCh-HHHHHHHh---c--CCEEEEccCcHH
Confidence 589999999999998877666665432 2479999999997644332 23444442 2 489999999973
No 54
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.83 E-value=9.5e-06 Score=82.01 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=47.9
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
|||+|+||+||++..|.+.++.+... .+.|.+|++||+..-..... +..+++ ...+.++++|.||||.
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~-~~~d~~v~lGD~vdrG~~s~-~~l~~l---~~l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFT-PGKDTLWLTGDLVARGPGSL-DVLRYV---KSLGDSVRLVLGNHDL 68 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCC-TTTCEEEECSCCSSSSSCHH-HHHHHH---HHTGGGEEECCCHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCC-CCCCEEEEeCCcCCCCCccH-HHHHHH---HhCCCceEEEECCCcH
Confidence 68999999999999887766665432 23699999999976443322 333443 2335589999999973
No 55
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.81 E-value=1.4e-05 Score=79.86 Aligned_cols=66 Identities=17% Similarity=0.293 Sum_probs=46.8
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCC
Q 008383 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVG 76 (567)
Q Consensus 4 ~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~ 76 (567)
+||+++||+||+++.|.+.++.+... ++.|.+|++||+........ ++.+++. . .++|+|.||||.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~ii~~GD~vd~g~~~~-~~l~~l~---~--~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFK-QGSDTLVAVGDLVNKGPDSF-GVVRLLK---R--LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCC-TTTSEEEECSCCSSSSSCHH-HHHHHHH---H--HTCEECCCHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhcc-CCCCEEEEecCCCCCCCCHH-HHHHHHH---H--CCCEEEeCcChH
Confidence 49999999999998777666655432 24699999999976443322 3334432 1 479999999974
No 56
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.63 E-value=0.0022 Score=69.93 Aligned_cols=206 Identities=13% Similarity=0.057 Sum_probs=104.4
Q ss_pred CCEEEEEcCCCCCH------------------HHHHHHHHHHHhhcCCCcEEEE-ecCCCCCChh----hHHHHHHHhcc
Q 008383 3 PPRILLCGDVLGRL------------------NQLFKRVQSVNKSAGPFDAVLC-VGQFFPDSSE----LLDEFMNYVEG 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~------------------~~l~~kv~~l~~k~GpfD~vi~-~GDff~~~~~----~~~~~~~~l~g 59 (567)
.++||.++|+||++ ..+...++++.+++ .|.|++ +||++....- ....+.+.+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~--~~~llldaGD~~~g~~~~~~~~g~~~~~~l-- 81 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKN--KATWFFDAGDYFTGPYISSLTKGKAIIDIM-- 81 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHC--SSEEEEECSCCSSSSHHHHTTTTHHHHHHH--
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcC--CCeEEEECCCCCCCchhhhhcCChHHHHHH--
Confidence 47899999999874 34455555555544 366666 9998764311 011223333
Q ss_pred cCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEeC--------CCCeEEEcCeEEEEEecccC
Q 008383 60 RSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK--------GSGNFTLHGLSVAYLSGRQS 128 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg--------~~gv~~~~GlrIa~lgG~~~ 128 (567)
..++. -+++.||||.. ..+.+.+.. .+-..++.|++.-. ..-|++.+|+||+.+|-...
T Consensus 82 -n~lg~-D~~tlGNHEfd~G~~~l~~~l~~--------~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~ 151 (509)
T 3ive_A 82 -NTMPF-DAVTIGNHEFDHGWDNTLLQLSQ--------AKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGV 151 (509)
T ss_dssp -TTSCC-SEECCCGGGGTTCHHHHHHHHTT--------CSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECH
T ss_pred -HhcCC-cEEeecccccccCHHHHHHHHhh--------CCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccC
Confidence 34443 36778999943 233443431 12235778887532 22355689999999987421
Q ss_pred ------CCCC--CCCCCC--HHHHHH-HHHhhcCCCCccEEEeCCCCccccccccccccccccCCCCCCcHHHHHHHHHh
Q 008383 129 ------SEGQ--QFGTYS--QDDVDA-LRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDSSNTDSTVSELVAEI 197 (567)
Q Consensus 129 ------~~~~--~~~~~t--~~dv~~-L~~~~~~~~~vDILLTh~wP~gI~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l 197 (567)
.... .-..|. .+.++. +..+. ..-.+=|+|+|.--.+-.. .. ... ....|...-.++++++
T Consensus 152 ~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~-~~---~~~---~~~~~~~~d~~la~~~ 223 (509)
T 3ive_A 152 FAFNDTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQS-SM---GGT---DVRRALDKDIQTASQV 223 (509)
T ss_dssp HHHHHHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCC-CC---------CCCCCCHHHHHHHHHC
T ss_pred cccccccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccc-cc---ccc---ccccccchHHHHHhcC
Confidence 0000 011232 122222 22232 1223335778864111100 00 000 1123444445666665
Q ss_pred C-CCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 198 K-PRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 198 k-PRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
. .-..++||.|..+.. |. ....|-.+..+.+|.
T Consensus 224 ~giDlIlgGHtH~~~~~-~~----~~~~~~ivqag~~g~ 257 (509)
T 3ive_A 224 KGLDILITGHAHVGTPE-PI----KVGNTLILSTDSGGI 257 (509)
T ss_dssp SSCCEEEEESSCCCCSS-CE----EETTEEEECCCSTTS
T ss_pred CCCcEEEeCCcCccCCC-Ce----eeCCEEEEecChhhc
Confidence 3 678999998865331 11 122466676666654
No 57
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=97.62 E-value=0.00015 Score=77.94 Aligned_cols=75 Identities=19% Similarity=0.266 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHH-------
Q 008383 2 SPPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNY------- 56 (567)
Q Consensus 2 ~~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~------- 56 (567)
..||||+++|+|-.. ...++++-.+..+. ..|+||++||+|..... ..+.|.+|
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 368999999999741 12333333333333 47999999999875321 12233343
Q ss_pred ----hcc------------------cCCCCccEEEEccCCCCh
Q 008383 57 ----VEG------------------RSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 57 ----l~g------------------~~~~p~ptyfv~GN~~~~ 77 (567)
|+. ...+.+|+|+|.||||.+
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 211 114589999999999875
No 58
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=97.60 E-value=0.00019 Score=76.36 Aligned_cols=75 Identities=19% Similarity=0.259 Sum_probs=46.8
Q ss_pred CCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh-------hHHHHHHH--------
Q 008383 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE-------LLDEFMNY-------- 56 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~-------~~~~~~~~-------- 56 (567)
.||||.++|+|-.. ...++++-.+..+. ..|+||++||+|..... ..+.+.+|
T Consensus 13 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~-~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~~ 91 (417)
T 4fbw_A 13 TIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER-DVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCE 91 (417)
T ss_dssp CEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCCC
T ss_pred CeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCccc
Confidence 68999999999752 23344433333333 47999999999875321 12233333
Q ss_pred ---hc------------------ccCCCCccEEEEccCCCChH
Q 008383 57 ---VE------------------GRSEIPIPTYFIGDYGVGAA 78 (567)
Q Consensus 57 ---l~------------------g~~~~p~ptyfv~GN~~~~~ 78 (567)
|+ ....+.+|+|+|.||||.+.
T Consensus 92 ~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~ 134 (417)
T 4fbw_A 92 LELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPS 134 (417)
T ss_dssp CEECC------------CCGGGCTTBCBSSCEEECCCGGGC--
T ss_pred ceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcc
Confidence 21 01245899999999998753
No 59
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=97.56 E-value=0.00024 Score=75.86 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=46.1
Q ss_pred CCEEEEEcCCCCCH-----------HHHHHHHHHHHhhcCCCcEEEEecCCCCCCh---hhHH----HHHHHhcc-----
Q 008383 3 PPRILLCGDVLGRL-----------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSS---ELLD----EFMNYVEG----- 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~---~~~~----~~~~~l~g----- 59 (567)
.||||+++|+|-.. ...++++-.+..+. ..|+||++||+|.... .... .|.+|-.|
T Consensus 32 ~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~-~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~~~ 110 (431)
T 3t1i_A 32 TFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQEN-EVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRPVQ 110 (431)
T ss_dssp EEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHT-TCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSCCC
T ss_pred CEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhc-CCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCccc
Confidence 48999999999532 12333433333333 4799999999987532 2222 23332111
Q ss_pred ------------------------cCCCCccEEEEccCCCCh
Q 008383 60 ------------------------RSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 60 ------------------------~~~~p~ptyfv~GN~~~~ 77 (567)
...+.+|+|+|.||||.+
T Consensus 111 ~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 111 FEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred ceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 124689999999999976
No 60
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=97.53 E-value=0.00012 Score=74.86 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.+||.|+||+||++..|.+.++...... .-+.+|++||+..-++...+.+.-++.-....|-.++++-||||..
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~~-~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLPS-ETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCB-TTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCCC-CCCEEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccc
Confidence 4789999999999998887665443221 2356999999987655433333322221233466799999999964
No 61
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.51 E-value=8.7e-05 Score=75.94 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=49.6
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcc-cCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEG-RSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g-~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..|.+.++.+.. .+.|.+|++||+..-++...+. ..++.. ....|-.++++-||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~--~~~~~~vflGD~VDRG~~s~ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGK--SPDTNYLFMGDYVDRGYYSVET-VTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCC--TTTSCEEECSCCSSSSTTHHHH-HHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCC--CCCCEEEEeCCccCCCCChHHH-HHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 46899999999999988766654432 2457889999998655443333 333321 223466799999999974
No 62
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.47 E-value=0.00012 Score=78.99 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=50.5
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.|||+||||+||++..|.+.++.+... ++-|.+|++||+..-++...+.+.-++.-....|-.++++-||||..
T Consensus 212 ~~~~~vigDiHG~~~~l~~~l~~~~~~-~~~~~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 212 TEKITVCGDTHGQFYDLLNIFELNGLP-SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SCEEEEECBCTTCHHHHHHHHHHHCCC-BTTBCEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CcceEEEeCCCCCHHHHHHHHHHcCCC-CCcCeEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHH
Confidence 379999999999999887666654321 23467999999976554433333333221234577899999999964
No 63
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.00014 Score=74.96 Aligned_cols=74 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.|||.||||+||++..|.+.++.+.... +-+.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 63 ~~ri~viGDIHG~~~~L~~ll~~~g~~~-~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 63 DVKISVCGDTHGQFYDVLNLFRKFGKVG-PKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCB-TTEEEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHcCCCC-CCcEEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhh
Confidence 4789999999999998887666543211 2356999999987655434333333222234566799999999964
No 64
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.46 E-value=8.5e-05 Score=77.09 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhc------CCCcEEEEecCCCCCChhhHHHHHHHhcccC----CCCccEEEEcc
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSA------GPFDAVLCVGQFFPDSSELLDEFMNYVEGRS----EIPIPTYFIGD 72 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~------GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~----~~p~ptyfv~G 72 (567)
.|||+|+||+||++..|.+.++.+..-. ...|.+|++||+..-+.... +...++.... ..|..++++.|
T Consensus 70 ~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~-evl~~l~~l~~~~~~~~~~v~~v~G 148 (342)
T 2z72_A 70 IKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN-EVLWFMYQLDQQARDAGGMVHLLMG 148 (342)
T ss_dssp CCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH-HHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH-HHHHHHHHHHHHHhhCCCeEEEEec
Confidence 4799999999999988776555433110 13699999999976443322 2333332212 45678999999
Q ss_pred CCCC
Q 008383 73 YGVG 76 (567)
Q Consensus 73 N~~~ 76 (567)
|||.
T Consensus 149 NHE~ 152 (342)
T 2z72_A 149 NHEQ 152 (342)
T ss_dssp HHHH
T ss_pred CCcH
Confidence 9984
No 65
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=97.45 E-value=0.0001 Score=75.97 Aligned_cols=73 Identities=15% Similarity=0.283 Sum_probs=50.2
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.||||+||++..|.+.++.+.. .+-|.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 56 ~~~i~viGDIHG~~~~L~~ll~~~g~--~~~~~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 56 EAPLKICGDIHGQYYDLLRLFEYGGF--PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCS--TTSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cCceEEecCCCCCHHHHHHHHHHhCC--CCcceEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 46899999999999988776665432 24688999999976544433333222211123466799999999965
No 66
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A*
Probab=97.40 E-value=0.001 Score=69.13 Aligned_cols=111 Identities=12% Similarity=0.097 Sum_probs=72.3
Q ss_pred CCccccCCCCCCcceEEE-----ECCEEEEEecCCCCCC------------C-----------eEEEEeccccCCCCCCC
Q 008383 390 ECWFCLSSPSVESHLIVS-----VGEYYYCALPKGPLVE------------D-----------HVLVIPVEHVPNTISTS 441 (567)
Q Consensus 390 ~C~FC~~~~~~~~hliis-----~g~~~yl~l~kgpl~~------------g-----------H~LIiP~~H~~s~~~~~ 441 (567)
.|.||-.+......-|.. -+-.++++..+.|..+ | ++||.+-.|..++.+|+
T Consensus 62 ~CpfCpg~~~~t~~e~~~~~~~~~~~~~~v~~N~fP~l~~~~~~~~~~~~~~l~~~~~~~G~~~Vii~sp~H~~~l~~ls 141 (351)
T 1z84_A 62 SCPFCIGREQECAPELFRVPDHDPNWKLRVIENLYPALSRNLETQSTQPETGTSRTIVGFGFHDVVIESPVHSIQLSDID 141 (351)
T ss_dssp CCTTSTTCGGGSSCEEEEESTTCSSCSEEEEECSSCSSBGGGTTTC--------CEEECBCEEEEEECCSSSSCCGGGSC
T ss_pred CCcCCCCCcccCCcccccccccCCCceEEEEcCCCccccCCCCCcccccccchhhccccCcceEEEEeCCCCCCCcHHCC
Confidence 799998765432122333 2467899999999773 5 88999999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHHhcCC-ceEEEEec----CCCCCeeEEEEeecCcc---h---hhHHHHHHHH
Q 008383 442 PECEKELGRFQ-NSLMMYYKNQGK-EAVFFEWL----SKRGTHANLQAVPIPTS---K---AAAVQDIFNL 500 (567)
Q Consensus 442 ~~~~~E~~~~~-~~L~~~~~~~g~-~~v~~E~~----~~~~~H~hi~~vPvp~~---~---~~~~~~~F~~ 500 (567)
.+.+.++..+- +.+..+.+..+. -+.+||+. +-...|.|.|++-.|.- . ...++.||++
T Consensus 142 ~~e~~~vi~~~~~~~~~L~~~~~~~yv~iF~N~G~~aGaSl~HpH~QI~a~~~~p~~~~~e~~~~~~y~~~ 212 (351)
T 1z84_A 142 PVGIGDILIAYKKRINQIAQHDSINYIQVFKNQGASAGASMSHSHSQMMALPVVPPTVSSRLDGTKDYFEE 212 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEEEEESGGGTCCCSSCEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCEEEEEEEcCcccCCCCcCccceeEecCcCChHHHHHHHHHHHHHhh
Confidence 99888888764 444444333343 45667732 22246888888864432 1 2345566655
No 67
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=97.37 E-value=0.00015 Score=73.81 Aligned_cols=73 Identities=15% Similarity=0.292 Sum_probs=50.3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..|.+.++..... +.|.+|++||+..-++...+.+.-++.-....|-.++++-||||..
T Consensus 55 ~~~i~viGDIHG~~~~L~~ll~~~g~~--~~~~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 55 EAPLKICGDIHGQYYDLLRLFEYGGFP--PESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp CSSEEEECBCTTCHHHHHHHHHHHCST--TSSCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCCEEEEecCCCCHHHHHHHHHHhCCC--CCccEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 467999999999999887766544322 4688999999987654433333322221234566799999999964
No 68
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=97.24 E-value=0.00028 Score=76.29 Aligned_cols=73 Identities=14% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.||||+||++..|.+.++ +.. ..+-|.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 82 ~~pI~VIGDIHGq~~dL~~LL~-~~g-~p~~d~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 82 DAPVTVCGDIHGQFFDLMKLFE-VGG-SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp CSSEEEECCCTTCHHHHHHHHH-HHC-CTTTCCEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCCHHHHHHHHH-hcC-CCCcceEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 4689999999999998886655 222 225699999999976544433333222211123456699999999964
No 69
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=97.20 E-value=0.00034 Score=72.63 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
.++|.|+||+||++..|.+.++... ..+-|.+|++||+..-+....+.+.-++.-....|-.++++-||||..
T Consensus 69 ~~pi~ViGDIHG~~~dL~~ll~~~g--~~~~~~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 69 DAPVTVCGDIHGQFFDLMKLFEVGG--SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHC--CTTTCCEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred cccceeeccCCCCHHHHHHHHHhcC--CCCCcEEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 3579999999999998876554322 224688999999987654433333322221234566799999999964
No 70
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=96.95 E-value=0.041 Score=60.59 Aligned_cols=204 Identities=9% Similarity=-0.054 Sum_probs=106.2
Q ss_pred CCEEEEEcCCCCCH----------------HHHHHHHHHHHhhcCCCc-EEEEecCCCCCChhh------HHHHHHHhcc
Q 008383 3 PPRILLCGDVLGRL----------------NQLFKRVQSVNKSAGPFD-AVLCVGQFFPDSSEL------LDEFMNYVEG 59 (567)
Q Consensus 3 ~~KILv~GDvhG~~----------------~~l~~kv~~l~~k~GpfD-~vi~~GDff~~~~~~------~~~~~~~l~g 59 (567)
.++||.++|+||++ ..+...++++.++.++ | ++|-.||++....-. .....+.+
T Consensus 15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~-~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l-- 91 (557)
T 3c9f_A 15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQ-DLLLIDSGDRHDGNGLSDITSPNGLKSTPIF-- 91 (557)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTC-EEEEEECSCCCSSCHHHHSSSSTTTTTHHHH--
T ss_pred EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCC-CEEEEecCCCCCCccchhhcccCCHHHHHHH--
Confidence 47899999999975 3344444443323444 6 579999997642100 00112222
Q ss_pred cCCCCccEEEEccCCCChHH------HHHHHhccccccCcccCCceecccEEEeC----------CCCeEEE--cCeEEE
Q 008383 60 RSEIPIPTYFIGDYGVGAAK------VLLAASKNSANQGFKMDGFKVTDNLFWLK----------GSGNFTL--HGLSVA 121 (567)
Q Consensus 60 ~~~~p~ptyfv~GN~~~~~~------~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg----------~~gv~~~--~GlrIa 121 (567)
..+++. +++.||||.... +...+.. .+...++.|+.+.. ..-+++. +|+||+
T Consensus 92 -n~lg~D-a~tlGNHEfD~G~~~l~~~~~~l~~--------a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIg 161 (557)
T 3c9f_A 92 -IKQDYD-LLTIGNHELYLWENSKQEYETVVNH--------FQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVM 161 (557)
T ss_dssp -TTSCCS-EECCCGGGSSSHHHHHHHHHHHHHH--------TTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEE
T ss_pred -HhcCCC-EEeecchhcccchHHHHHHHHHHHh--------CCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEE
Confidence 445544 567799997522 2222221 12335777887632 2345577 899999
Q ss_pred EEecccCCCCC-CCCCCC-HHH-HH--HHHHhhcCCCCcc--EEEeCCCCcc-ccccccccccccccCCCCCCcHHHHHH
Q 008383 122 YLSGRQSSEGQ-QFGTYS-QDD-VD--ALRALAEEPGIVD--LFLTNEWPSG-VTNKAAASDMLVGISDSSNTDSTVSEL 193 (567)
Q Consensus 122 ~lgG~~~~~~~-~~~~~t-~~d-v~--~L~~~~~~~~~vD--ILLTh~wP~g-I~~~~~~~~~~~~~~~~~~Gs~~i~~l 193 (567)
.+|=....... ....|. ..+ ++ .+..+. ..++| |+|+|. +.. -. + .. ......+
T Consensus 162 iiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~--~~~~D~IIvL~H~-G~~~~~---d-----------~~-~~~~~~l 223 (557)
T 3c9f_A 162 AFGFLFDFKRFNSGTRVTPMAETIHEPWFQEAL--KHEVDLIIIVGHT-PISHNW---G-----------EF-YQVHQYL 223 (557)
T ss_dssp EEECCCCCCCCCTTEEECCHHHHTTSHHHHHHT--TSCCSEEEEECSS-CCCTTT---C-----------HH-HHHHHHH
T ss_pred EEEeecCCCCCCCCcEECCHHHHHHHHHHHHHH--hcCCCEEEEeccc-CccccC---c-----------cc-cHHHHHH
Confidence 99865431111 011232 222 12 233322 23566 566774 331 10 0 01 2334455
Q ss_pred HHHhCCC---EEEEccCCCccccccccCCCCcceeEEEEccCCCCcccceeEEEeccCC
Q 008383 194 VAEIKPR---YHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTP 249 (567)
Q Consensus 194 ~~~lkPR---Yhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~~~K~Kw~yAf~i~p 249 (567)
++.+ |- ..|.||.|.... .+|.+ .|-.+..|.++. ++--++|+-
T Consensus 224 A~~~-~giDilIlgGHtH~~~~-~~~~~-----~t~ivqaG~~g~-----~lG~l~l~~ 270 (557)
T 3c9f_A 224 RQFF-PDTIIQYFGGHSHIRDF-TVFDS-----LSTGLQSGRYCE-----TVGWTSVNL 270 (557)
T ss_dssp HHHC-TTSEEEEEECSSCCEEE-EEEET-----TEEEEEECSTTS-----EEEEEEECC
T ss_pred HHhC-CCCCEEEECCCCCCCCc-ceecC-----CeEeeeccchhc-----EEEEEEEEE
Confidence 5554 43 478999887633 23322 466677777764 666566554
No 71
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=96.76 E-value=0.038 Score=60.92 Aligned_cols=162 Identities=10% Similarity=0.032 Sum_probs=81.8
Q ss_pred Cc-EEEEecCCCCCChhh----HHHHHHHhcccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccE
Q 008383 33 FD-AVLCVGQFFPDSSEL----LDEFMNYVEGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNL 104 (567)
Q Consensus 33 fD-~vi~~GDff~~~~~~----~~~~~~~l~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl 104 (567)
.| ++|.+||++...... .....+.+ ..++.+. ++ ||||.. ..+...+.. .+-..++.|+
T Consensus 123 pd~Lll~~GD~~~gs~~~~~~~g~~~~~~l---n~lg~d~-~~-GNHEfd~G~~~l~~~l~~--------~~~p~L~aNv 189 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGLSLLTRGEAVVRWQ---NLVGVDH-MV-SHWEWTLGRERVEELLGL--------FRGEFLSYNI 189 (562)
T ss_dssp CCEEEEECSCCSSSSHHHHHHTTHHHHHHH---HHHTCCE-EC-CSGGGGGCHHHHHHHHHH--------CCSEECCSSC
T ss_pred CCEEEEeCCCCCCcchhhhhhCCHHHHHHH---HhhCCcE-Ee-cchhcccCHHHHHHHHHh--------CCCCEEEEEE
Confidence 37 899999998653210 11222333 3445665 47 999953 222232321 1223466676
Q ss_pred EEeC-------CCCeEEEcCeEEEEEecccCC-----CCC--CCCCCC--HHHHHHH-HHhhcCCCCccEEEeCCCCccc
Q 008383 105 FWLK-------GSGNFTLHGLSVAYLSGRQSS-----EGQ--QFGTYS--QDDVDAL-RALAEEPGIVDLFLTNEWPSGV 167 (567)
Q Consensus 105 ~~Lg-------~~gv~~~~GlrIa~lgG~~~~-----~~~--~~~~~t--~~dv~~L-~~~~~~~~~vDILLTh~wP~gI 167 (567)
..-. ..-+++.+|++|+.+|-.... +.. ....|. .+.++.+ ..+......+=|+|+|.... .
T Consensus 190 ~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~d~iIvLsH~g~~-~ 268 (562)
T 2wdc_A 190 VDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQ-L 268 (562)
T ss_dssp EETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHHTTCSEEEEEECSCHH-H
T ss_pred EecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHHCCCCEEEEEeCCCCc-c
Confidence 6431 223556899999999865321 000 011232 3334332 22322122344788885421 1
Q ss_pred cccccccccccccCCCCCCcHHHHHHHHHh-CCCEEEEccCCCccccccccCCCCcceeEEEEccCCCC
Q 008383 168 TNKAAASDMLVGISDSSNTDSTVSELVAEI-KPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGN 235 (567)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~Gs~~i~~l~~~l-kPRYhf~Gh~~~fyEr~Py~~~~~~~~TRFI~L~~~g~ 235 (567)
. .++++++ ..-..|+||.|..+.. .. ....|-.+.-|.+|.
T Consensus 269 d----------------------~~la~~~~giDlIlgGHtH~~~~~---~~--~~~~t~vvqag~~g~ 310 (562)
T 2wdc_A 269 D----------------------AALAERIRGIDLILSGHTHDLTPR---PW--RVGKTWIVAGSAAGK 310 (562)
T ss_dssp H----------------------HHHHTTSSSCCEEEECSSCCCCSS---CE--EETTEEEEECCSTTC
T ss_pred h----------------------HHHHhcCCCCcEEEeCCCCCCCcc---CE--EECCEEEEecCcccc
Confidence 0 1233332 4568999998876532 11 113477788887775
No 72
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=96.50 E-value=0.007 Score=66.57 Aligned_cols=114 Identities=14% Similarity=0.062 Sum_probs=67.9
Q ss_pred CCEEEEEcCCCCCH--------------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----HHHHHHHhc
Q 008383 3 PPRILLCGDVLGRL--------------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----LDEFMNYVE 58 (567)
Q Consensus 3 ~~KILv~GDvhG~~--------------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~~~~~~~l~ 58 (567)
.++||.++|+||++ ..+...++++.+++ |-+++|.+||++...... ...+.+.+
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~-~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l- 102 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFM- 102 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH-
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhC-CCEEEEECCccCCCchhhhhhCChHHHHHH-
Confidence 36899999999864 45666666666554 458999999987653210 01122222
Q ss_pred ccCCCCccEEEEccCCCChHHHHHHHh-ccccccCcccCCceecccEEEeC-----------CCCeEEEcCeEEEEEecc
Q 008383 59 GRSEIPIPTYFIGDYGVGAAKVLLAAS-KNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~~~~~~l~-~~~~~~~~~~~~~~i~~Nl~~Lg-----------~~gv~~~~GlrIa~lgG~ 126 (567)
..++.. +++.||||.... .+.+. ..-. ..+-..++.|+...+ ..-|++.+|+||+.+|=.
T Consensus 103 --n~lg~d-~~~~GNHEfd~g-~~~l~~~~~~----~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~ 174 (546)
T 4h2g_A 103 --NALRYD-AMALGNHEFDNG-VEGLIEPLLK----EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYT 174 (546)
T ss_dssp --HHHTCS-EEECCGGGGTTH-HHHHHTTTTT----TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEE
T ss_pred --HhcCCc-EEeccCcccccC-HHHHHHHHHh----hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEec
Confidence 233333 688899985422 12121 1000 012346788887643 234556899999999855
No 73
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=96.48 E-value=0.035 Score=61.39 Aligned_cols=110 Identities=16% Similarity=0.045 Sum_probs=64.8
Q ss_pred CEEEEEcCCCCCHH---------------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008383 4 PRILLCGDVLGRLN---------------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (567)
Q Consensus 4 ~KILv~GDvhG~~~---------------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~ 58 (567)
++||.++|+||++. .+...++++.+++ +-.++|..||++..... ......+.+
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l- 90 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKY-KNPLVLHAGDAITGTLYFTLFGGSADAAVM- 90 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSCSSHHHHTTTTHHHHHHH-
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCceeeeecCCHHHHHHH-
Confidence 78999999999853 3445555555544 44699999999764310 001122222
Q ss_pred ccCCCCccEEEEccCCCChHH---HHHHHhccccccCcccCCceecccEEEeCC---------CCeEEEcCeEEEEEecc
Q 008383 59 GRSEIPIPTYFIGDYGVGAAK---VLLAASKNSANQGFKMDGFKVTDNLFWLKG---------SGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~~---~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~---------~gv~~~~GlrIa~lgG~ 126 (567)
..++. -+++.||||.... +...+.. .+-..++.|++.... .-|++.+|++|+.+|-.
T Consensus 91 --n~lg~-D~~tlGNHEfd~G~~~l~~~~~~--------~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t 159 (579)
T 3ztv_A 91 --NAGNF-HYFTLGNHEFDAGNEGLLKLLEP--------LKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLD 159 (579)
T ss_dssp --HHHTC-SEEECCSGGGTTHHHHHHHHHTT--------CCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEE
T ss_pred --HhcCc-CeeeccccccccCHHHHHHHHHh--------cCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEE
Confidence 22333 3578899985422 2222221 123467888875321 23456799999999874
No 74
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=96.40 E-value=0.043 Score=60.31 Aligned_cols=111 Identities=10% Similarity=-0.082 Sum_probs=65.6
Q ss_pred CCEEEEEcCCCCCH-----------------HHHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhcccC
Q 008383 3 PPRILLCGDVLGRL-----------------NQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVEGRS 61 (567)
Q Consensus 3 ~~KILv~GDvhG~~-----------------~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~g~~ 61 (567)
.++||.++|+||++ ..+...++++.+.+ |-.++|..||++..... ....+.+.+ .
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~-~~~l~l~~GD~~~gs~~~~~~~~~~~~~~l---n 104 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARA-KNPLFLDAGDVFQGTLYFNQYRGLADRYFM---H 104 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHS-SSEEEEECSCCSSSSHHHHHHTTHHHHHHH---H
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCcHHHHHhCCcHHHHHH---H
Confidence 37899999999864 35556666666554 42488999999765321 011222332 3
Q ss_pred CCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEeC---------CCCeEEEcCeEEEEEecc
Q 008383 62 EIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWLK---------GSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 62 ~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg---------~~gv~~~~GlrIa~lgG~ 126 (567)
.++. .+++.||||.. ..+.+.+.. .+-..++.|+..-+ ..-+++.+|++|+.+|=.
T Consensus 105 ~lg~-d~~~lGNHEfd~g~~~l~~~l~~--------~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~ 172 (552)
T 2z1a_A 105 RLRY-RAMALGNHEFDLGPGPLADFLKG--------ARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLT 172 (552)
T ss_dssp HTTC-CEEECCGGGGTTCHHHHHHHHTT--------CCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEE
T ss_pred hcCC-CccccccccccCCHHHHHHHHhh--------CCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEec
Confidence 3333 47889999864 223333331 12235667776422 122556789999998754
No 75
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=96.21 E-value=0.0036 Score=62.98 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=43.5
Q ss_pred CCCCEEEEEcCCCCCH--HHHHHHHHHHHhhcCCCcEEEEecCCCCCC-hhhHHHHHHHhcccCCCCccEEEEccCCCCh
Q 008383 1 MSPPRILLCGDVLGRL--NQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-SELLDEFMNYVEGRSEIPIPTYFIGDYGVGA 77 (567)
Q Consensus 1 M~~~KILv~GDvhG~~--~~l~~kv~~l~~k~GpfD~vi~~GDff~~~-~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~ 77 (567)
|.+||||++||+||+. ..+...+.++.++.. .|++|+-||.+..+ .-.......+ ..+++- ..+.|||+-.
T Consensus 2 ~~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~-~d~vi~Ngen~~gG~g~~~~~~~~l----n~~G~D-a~TlGNHefD 75 (281)
T 1t71_A 2 MNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQ-ADLVIVNAENTTHGKGLSLKHYEFL----KEAGVN-YITMGNHTWF 75 (281)
T ss_dssp CCCCEEEEECEEBHHHHHHHHHTTHHHHHHHHT-CSEEEEECTBTTTTSSCCHHHHHHH----HHHTCC-EEECCTTTTC
T ss_pred cceEEEEEECCcCChHHHHHHHHHHHHHHHhcC-CCEEEEcCCCCCCCCCcCHHHHHHH----HhcCCC-EEEEccCccc
Confidence 6689999999999973 445556666665543 59999999864321 1111222222 223343 3455799865
Q ss_pred H
Q 008383 78 A 78 (567)
Q Consensus 78 ~ 78 (567)
.
T Consensus 76 ~ 76 (281)
T 1t71_A 76 Q 76 (281)
T ss_dssp C
T ss_pred C
Confidence 3
No 76
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=95.41 E-value=0.12 Score=53.36 Aligned_cols=113 Identities=10% Similarity=-0.034 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHH-----------
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMN----------- 55 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~----------- 55 (567)
+++||.++|+||++. ++-..++++.+++ +-.++|-.||++....- ..+..
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~n~llld~GD~~qGs~~--~~~~~~~~~~~g~~~p 84 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEV-KNSVLVDNGDVIQGSPL--GDYMAAKGLKEGDVHP 84 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTC-SCEEEEECSCCSSSSHH--HHHHHHHCCCTTCCCH
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhC-CCEEEEECCCCCCCchh--HHhhhhcccccccchH
Confidence 468999999999863 3444455544443 44688999999764321 11110
Q ss_pred HhcccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEEe-------CCCCeEEE-----c----
Q 008383 56 YVEGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFWL-------KGSGNFTL-----H---- 116 (567)
Q Consensus 56 ~l~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~L-------g~~gv~~~-----~---- 116 (567)
.+.-...++.- +++.||||.. ..+...+.. .+-..++.|++.- ....|++. +
T Consensus 85 ~~~~mn~lg~D-~~t~GNHEfd~G~~~l~~~~~~--------a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~ 155 (339)
T 3jyf_A 85 VYKAMNTLNYA-VGNLGNHEFNYGLDFLHKALAG--------AKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIH 155 (339)
T ss_dssp HHHHHTTSCCS-EEECCGGGGTTCHHHHHHHHHT--------CSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEE
T ss_pred HHHHHHhcCCC-EEecchhhhhccHHHHHHHHHh--------cCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcC
Confidence 11111344443 5677999953 223333321 1234688888762 12234444 4
Q ss_pred CeEEEEEeccc
Q 008383 117 GLSVAYLSGRQ 127 (567)
Q Consensus 117 GlrIa~lgG~~ 127 (567)
|+|||.+|=.-
T Consensus 156 gvkIgviG~~~ 166 (339)
T 3jyf_A 156 TLRIGYIGFVP 166 (339)
T ss_dssp EEEEEEEEECC
T ss_pred CeEEEEEeccc
Confidence 69999998663
No 77
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=95.13 E-value=0.086 Score=54.36 Aligned_cols=112 Identities=10% Similarity=-0.063 Sum_probs=63.2
Q ss_pred CCEEEEEcCCCCCHH----------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChhh----H------------
Q 008383 3 PPRILLCGDVLGRLN----------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSEL----L------------ 50 (567)
Q Consensus 3 ~~KILv~GDvhG~~~----------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~----~------------ 50 (567)
+++||.++|+||++. ++-..++++.+++ +-.++|-.||++....-. .
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~-~~~llld~GD~~qGs~~~~~~~~~~~~~g~~~g~~ 89 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQN-PNTLLVDNGDLIQGNPLGEYAVKYQKDDIISGTKT 89 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSHHHHHHHHHHHHHHHHTSSC
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcC-CCEEEEecCccCCCcHHHHHhhhcccccccccccc
Confidence 368999999999863 3444455554443 446788999998643210 0
Q ss_pred HHHHHHhcccCCCCccEEEEccCCCCh---HHHHHHHhccccccCcccCCceecccEEE------eCCCCeEEE-----c
Q 008383 51 DEFMNYVEGRSEIPIPTYFIGDYGVGA---AKVLLAASKNSANQGFKMDGFKVTDNLFW------LKGSGNFTL-----H 116 (567)
Q Consensus 51 ~~~~~~l~g~~~~p~ptyfv~GN~~~~---~~~~~~l~~~~~~~~~~~~~~~i~~Nl~~------Lg~~gv~~~-----~ 116 (567)
....+.+ ..++.- +++.||||.. ..+...+.. ..-..++.|++. +....|++. +
T Consensus 90 ~~~~~~l---n~lg~D-a~tlGNHEfd~G~~~L~~~~~~--------~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~ 157 (341)
T 3gve_A 90 HPIISVM---NALKYD-AGTLGNHEFNYGLDFLDGTIKG--------ADFPIVNANVKTTSGENRYTPYVINEKTLIDEN 157 (341)
T ss_dssp CHHHHHH---HHTTCC-BEECCGGGGTTCHHHHHHHHHT--------CSSCEECSSEECTTSCBSSCCEEEEEEEEECTT
T ss_pred cHHHHHH---HhhCCC-eeeccchhhccCHHHHHHHHHh--------cCCCEEEEeeECCCCCCccCCeEEEEEeeeccC
Confidence 0011222 233433 4677999954 223333331 123467888864 222234444 3
Q ss_pred ----CeEEEEEeccc
Q 008383 117 ----GLSVAYLSGRQ 127 (567)
Q Consensus 117 ----GlrIa~lgG~~ 127 (567)
|+|||.+|-..
T Consensus 158 G~~~gvkIgviG~t~ 172 (341)
T 3gve_A 158 GNEQKVKVGYIGFVP 172 (341)
T ss_dssp SCEEEEEEEEEEECC
T ss_pred CCcCCeEEEEEEecc
Confidence 69999998663
No 78
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=95.11 E-value=0.22 Score=54.28 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=66.5
Q ss_pred CCEEEEEcCCCCCHH--------------------HHHHHHHHHHhhcCCCcEEEEecCCCCCChh----hHHHHHHHhc
Q 008383 3 PPRILLCGDVLGRLN--------------------QLFKRVQSVNKSAGPFDAVLCVGQFFPDSSE----LLDEFMNYVE 58 (567)
Q Consensus 3 ~~KILv~GDvhG~~~--------------------~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~----~~~~~~~~l~ 58 (567)
++.||.+.|+||+|. ++...++++.+++ |--++|-.||++....- .-....+++
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~-~n~llldaGD~~qGs~~~~~~~g~~~i~~m- 80 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAE-PNVLLLDAGDQYQGTIWFTVYKGAEVAHFM- 80 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHC-SSEEEEECSCCSCSSHHHHHHTTHHHHHHH-
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhC-cCeEEEEeCCcccchHHHHHhCChHHHHHH-
Confidence 468999999998753 4555555555544 44677889999875321 000111222
Q ss_pred ccCCCCccEEEEccCCCChH---HHHHHHhccccccCcccCCceecccEEEeC-----------CCCeEEEcCeEEEEEe
Q 008383 59 GRSEIPIPTYFIGDYGVGAA---KVLLAASKNSANQGFKMDGFKVTDNLFWLK-----------GSGNFTLHGLSVAYLS 124 (567)
Q Consensus 59 g~~~~p~ptyfv~GN~~~~~---~~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg-----------~~gv~~~~GlrIa~lg 124 (567)
..+++ -+.+.||||... .+++.+... ..-..|+.|++.-+ ..-|++.+|+|||.+|
T Consensus 81 --N~lgy-Da~~lGNHEFd~G~~~l~~~~~~~-------a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviG 150 (530)
T 4h1s_A 81 --NALRY-DAMALGNHEFDNGVEGLIEPLLKE-------AKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVG 150 (530)
T ss_dssp --HHTTC-CEEECCGGGGTTTTHHHHTTTTTT-------CSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEE
T ss_pred --hccCC-CEEEEchhhhccCHHHHHHHHHhh-------CCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeecc
Confidence 22222 367889998642 222322111 22457999997643 2345578999999998
Q ss_pred ccc
Q 008383 125 GRQ 127 (567)
Q Consensus 125 G~~ 127 (567)
-..
T Consensus 151 ltt 153 (530)
T 4h1s_A 151 YTS 153 (530)
T ss_dssp EEC
T ss_pred ccc
Confidence 663
No 79
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=93.36 E-value=0.13 Score=50.77 Aligned_cols=108 Identities=15% Similarity=0.043 Sum_probs=57.0
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecCCCCCC-hhhHHHHHHHhcccCCCCccEEEEccCCCChHH-
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS-SELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK- 79 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~-~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~- 79 (567)
||||++||+=|+ ...+...+.++.++. |++|+-|+-...+ .-.......+ ..+++-. ++.|||+-...
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~---d~vi~nge~~~~G~g~~~~~~~~l----~~~G~Da-~TlGNHefD~~~ 72 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF---DFVIVNMENSAGGFGMHRDAARGA----LEAGAGC-LTLGNHAWHHKD 72 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC---SEEEEECTBTTTTSSCCHHHHHHH----HHHTCSE-EECCTTTTSSTT
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC---CEEEECCCCccCCcCCCHHHHHHH----HhCCCCE-EEeccccccCch
Confidence 799999999886 445555566665543 9998888753211 1111222222 2333443 45589986533
Q ss_pred HHHHHhccccccCcccCCceecccEE---EeCC-CCeEEEcCeEEEEEecc
Q 008383 80 VLLAASKNSANQGFKMDGFKVTDNLF---WLKG-SGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 80 ~~~~l~~~~~~~~~~~~~~~i~~Nl~---~Lg~-~gv~~~~GlrIa~lgG~ 126 (567)
+++.+.... .-.-.+-|+- .-++ ..|++.+|+||+.+|-.
T Consensus 73 l~~~l~~~~-------~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~ 116 (255)
T 1t70_A 73 IYPMLSEDT-------YPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLL 116 (255)
T ss_dssp HHHHHHTTC-------SCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEE
T ss_pred HHHHHhhCC-------CcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEee
Confidence 333333110 0011123321 1122 34557789999988743
No 80
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=92.92 E-value=0.042 Score=43.79 Aligned_cols=56 Identities=30% Similarity=0.746 Sum_probs=21.6
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhh------hccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQ------CLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|..|...|.|+.|+.|+|.|+...-.. +-..+|..|.+.|.|..|.+|.+.|...
T Consensus 14 ~C~~f~~~G~C~~G~~C~f~H~~~e~~~~~~~~~~k~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 14 LCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp CCSGGGGTSCCTTTTTCSSCSSSCCGGGTC--------------------------------
T ss_pred hCHHhhhCCCcCCCCCccCCCCChhhccccccccccCCcccchhhCcCCCCcCcCCCCCCCC
Confidence 6776767789999999999999753322 2356898899999999999999887654
No 81
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=92.75 E-value=0.23 Score=48.92 Aligned_cols=108 Identities=15% Similarity=0.122 Sum_probs=57.3
Q ss_pred CEEEEEcCCCCC--HHHHHHHHHHHHhhcCCCcEEEEecC-CCC-CChhhHHHHHHHhcccCCCCccEEEEccCCCChHH
Q 008383 4 PRILLCGDVLGR--LNQLFKRVQSVNKSAGPFDAVLCVGQ-FFP-DSSELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAK 79 (567)
Q Consensus 4 ~KILv~GDvhG~--~~~l~~kv~~l~~k~GpfD~vi~~GD-ff~-~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~ 79 (567)
||||++||+-|+ ...+.+.+.++.+++ |++|+=|. .+. .... ......+ .++++-+ ++.|||+-...
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~---d~vi~ngen~~~G~g~~-~~~~~~l----~~~G~D~-~T~GNHefD~~ 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY---DLVIANGENAARGKGLD-RRSYRLL----REAGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC---SEEEEECTTTTTTSSCC-HHHHHHH----HHHTCCE-EECCTTTTSCT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC---CEEEEeCCCccCCCCcC-HHHHHHH----HhCCCCE-EEeccEeeECc
Confidence 799999999886 556666777776654 88777665 432 2111 1223333 3344554 47799986543
Q ss_pred -HHHHHhccccccCcccCCceecccEEEeCCCCeEEEcCeEEEEEecc
Q 008383 80 -VLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 80 -~~~~l~~~~~~~~~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~ 126 (567)
++..+..... .......++ .....+.|++.+|.+|+.++-.
T Consensus 72 ~l~~~l~~~~~-----vrpaN~~~~-~pg~~~~i~~~~G~kIgVi~l~ 113 (252)
T 2z06_A 72 EVYALLESEPV-----VRPLNYPPG-TPGKGFWRLEVGGESLLFVQVM 113 (252)
T ss_dssp THHHHHHHSSE-----ECCTTSCSS-CSSCSEEEEEETTEEEEEEEEE
T ss_pred hHHHHhccCCc-----eEeecCCCC-CCCCCeEEEEECCEEEEEEEcc
Confidence 3333321000 000000011 0112245667899999988743
No 82
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=92.19 E-value=0.45 Score=47.82 Aligned_cols=87 Identities=15% Similarity=0.107 Sum_probs=56.7
Q ss_pred CcceEEEECCE---EEEEec--C---CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---c-e
Q 008383 401 ESHLIVSVGEY---YYCALP--K---GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-A 466 (567)
Q Consensus 401 ~~hliis~g~~---~yl~l~--k---gpl~~gH~LIiP~~H-~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~---~-~ 466 (567)
+...|++.+++ =|+++| | .|+..=|+|+||.+| +.|+.+|..+-..=+.+++....+...+ +|. . .
T Consensus 149 E~e~ilyeD~d~~~gFvllpDlkWd~~~~~~lhlLaI~~~~~I~SlrdL~~~HlpLL~~M~~~~~~~i~~~y~~~~~~~r 228 (301)
T 3bl9_A 149 EADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAILQRYRMKGDHLR 228 (301)
T ss_dssp SGGGCCEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEE
T ss_pred ccccEEEecCCCCcCEEEeccCccCCCcccccEEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeE
Confidence 34456666555 266666 2 489999999999998 9999999877655555555555555443 232 2 3
Q ss_pred EEEEecCCCCCeeEEEEeecCc
Q 008383 467 VFFEWLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 467 v~~E~~~~~~~H~hi~~vPvp~ 488 (567)
++|-+. -...|+|+|+|-+..
T Consensus 229 lgfHy~-PS~yHLHlHvis~~~ 249 (301)
T 3bl9_A 229 VYLHYL-PSYYHLHVHFTALGF 249 (301)
T ss_dssp EEEESS-CSSSSCEEEEEETTS
T ss_pred EEecCC-CCcceEEEEEEecCC
Confidence 344421 234799999998753
No 83
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B*
Probab=91.20 E-value=0.5 Score=48.27 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=54.8
Q ss_pred eEEEECCE---EEEEec--C---CCCCCCeEEEEeccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCC---c-eEEE
Q 008383 404 LIVSVGEY---YYCALP--K---GPLVEDHVLVIPVEH-VPNTISTSPECEKELGRFQNSLMMYYKN-QGK---E-AVFF 469 (567)
Q Consensus 404 liis~g~~---~yl~l~--k---gpl~~gH~LIiP~~H-~~s~~~~~~~~~~E~~~~~~~L~~~~~~-~g~---~-~v~~ 469 (567)
.|++.+++ =||++| | .|+..=|+|+||.+| +.|+.+|..+-..=|.+++....++... +|. . .++|
T Consensus 199 ~vlyeD~d~~~gFvllpDlKWd~~~~~~lhlLaI~~~~dI~SlRdL~~~HlpLL~~M~~~~~~ii~~~yg~~~~~lRlgf 278 (350)
T 1vlr_A 199 RIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQVTGDRLRVYL 278 (350)
T ss_dssp CCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred cEEEecCCCCCCeEEeccCccCCCccccceEEEEecccCCCChHHCCHhHHHHHHHHHHHHHHHHHHhcCCChHHeEEEe
Confidence 45555544 266666 2 489999999999998 9999999877655555555555555443 232 2 3444
Q ss_pred EecCCCCCeeEEEEeecCc
Q 008383 470 EWLSKRGTHANLQAVPIPT 488 (567)
Q Consensus 470 E~~~~~~~H~hi~~vPvp~ 488 (567)
=+. -...|+|+|+|-+..
T Consensus 279 Hy~-PS~yHLHlHvis~~~ 296 (350)
T 1vlr_A 279 HYL-PSYYHLHVHFTALGF 296 (350)
T ss_dssp ESS-CSSSSCEEEEEETTS
T ss_pred cCC-CCcceEEEEEEeccC
Confidence 422 234799999998753
No 84
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=86.40 E-value=0.37 Score=37.74 Aligned_cols=53 Identities=36% Similarity=0.921 Sum_probs=39.8
Q ss_pred cceeeeccCCCCCCC-cccccCCchh----hhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDA----REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|..| ..|.|.+|+ .|+|.|.... .......+|.+|+. |.+.+| +|.+.|..+
T Consensus 8 vC~~f-~~G~C~rg~~~C~f~H~~~~~~~~~~~~~~~vC~~flk-G~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 8 VCREY-QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSRE-KCKYFHPPA 65 (70)
T ss_dssp BCHHH-HTTCCSSCTTTCSSBCCCTTSCCBTTTTEEEBCHHHHT-TCCCCT-TCCSBCCCH
T ss_pred hCHHH-hcCCCCCCCCCCCCccCcccccccccCCcceeccccCc-CCCCCC-CcCeeCCHH
Confidence 67777 669999999 5999998642 23344567988875 899988 888887643
No 85
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A*
Probab=83.52 E-value=3.3 Score=42.47 Aligned_cols=62 Identities=13% Similarity=-0.052 Sum_probs=39.0
Q ss_pred eEEEEec-cccCCCCCCCHHHHHHHHHH-HHHHHHHHHhcCCceEEEEec---CC-CCCeeEEEEeecC
Q 008383 425 HVLVIPV-EHVPNTISTSPECEKELGRF-QNSLMMYYKNQGKEAVFFEWL---SK-RGTHANLQAVPIP 487 (567)
Q Consensus 425 H~LIiP~-~H~~s~~~~~~~~~~E~~~~-~~~L~~~~~~~g~~~v~~E~~---~~-~~~H~hi~~vPvp 487 (567)
|-+||=- .|..++.+++.+.+.++..+ ++.+.++. ..-.-|.+||+- ++ ...|-|.|++-.|
T Consensus 106 ~~VIi~sp~H~~~l~~l~~~~~~~vi~~~~~r~~~l~-~~~~yV~iF~N~G~~~G~Sl~HpH~Qi~a~~ 173 (348)
T 1gup_A 106 SRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELG-KTYPWVQVFENKGAAMGCSNPHPGGQIWANS 173 (348)
T ss_dssp EEEEESCSCTTCCGGGSCHHHHHHHHHHHHHHHHHHH-HHCSEEEEEEEESGGGTCSCCSSEEEEEEES
T ss_pred EEEEEcCCcccCChhhCCHHHHHHHHHHHHHHHHHHh-hcCCEEEEecccCCcCCcCCCCCceeEEecc
Confidence 4555544 99999999998877776654 45555555 322345677732 22 2478888887543
No 86
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=83.24 E-value=0.86 Score=38.16 Aligned_cols=47 Identities=28% Similarity=0.730 Sum_probs=39.6
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.-| ..|.|..|+.|+|.|+ ..+|..|.+.|.|..|.+|.+.|...
T Consensus 15 lC~~f-~~G~C~~G~~C~f~H~--------~~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 15 LCKFY-ITGFCARAENCPYMHG--------DFPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp BCTTT-TTTCCSCSTTCSSBSS--------SSBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred cCccc-ccCcCCCCCCCCCCCC--------CCcCcCcccCCcCCCCCCCcccCCCC
Confidence 56555 3688999999999999 46788888899999999999998754
No 87
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=83.08 E-value=0.73 Score=37.40 Aligned_cols=53 Identities=32% Similarity=0.795 Sum_probs=40.3
Q ss_pred cceeeeccCCCCCCC-cccccCCchhh--hhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDAR--EQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.+|.. |.|.+++ .|+|.|....- ....--+|.+|+ +|.|.++ .|++-|...
T Consensus 11 VCr~Flr-G~C~r~d~~C~f~H~~~~~~~~~~~~~vC~dfl-kG~C~r~-~C~y~H~~~ 66 (83)
T 3d2n_A 11 VCREFQR-GTCSRPDTECKFAHPSKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPP 66 (83)
T ss_dssp BCTTGGG-TCCCSCTTTCSSBCCCTTCCEETTEEECCHHHH-TTCCCCS-SCSSCCCCH
T ss_pred hcHHHhc-CCCCCCCCCCCCcCCCccccccCCceeehhHhh-hccccCC-CcceeCChH
Confidence 7888887 9999997 99999997431 223346788984 6889888 888887654
No 88
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=80.32 E-value=0.8 Score=37.67 Aligned_cols=53 Identities=32% Similarity=0.803 Sum_probs=40.6
Q ss_pred cceeeeccCCCCCCC-cccccCCchh--hhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDA--REQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.+|.+ |.|.+++ .|+|.|.... -++..-.+|.+|+ +|+|.++ .|++-|...
T Consensus 19 VCrdFlr-G~C~r~d~~CrfsH~~~~~~v~~~~~~vC~dfl-kG~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 19 VCRQFQR-GTCSRSDEECKFAHPPKSCQVENGRVIACFDSL-KGRCSRE-NCKYLHPPT 74 (89)
T ss_dssp BCHHHHH-TCCCCCTTTSSSBCCCSSSCCBTTBEEBCHHHH-HTCCCCT-TCCSBCCCH
T ss_pred hchHHhc-CCCCCCCCCCCCcCCCccccccCCceeeehhhh-hCcCCCC-CcceecCHH
Confidence 7888888 9999998 9999998653 1233456799986 7888887 787776644
No 89
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.35 E-value=0.56 Score=39.30 Aligned_cols=53 Identities=40% Similarity=0.945 Sum_probs=42.0
Q ss_pred cceeeeccCCCCCCC-cccccCCchhh----hhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGE-KCNFRHDTDAR----EQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|..|.+ |.|.+|+ .|+|.|..... .+....+|.+|+ +|.|.+| +|++.|...
T Consensus 22 VCr~Flr-G~C~rgd~~C~FsH~~~~~~~~~~~~~~~vC~~fl-kG~C~r~-~C~y~H~~~ 79 (98)
T 2e5s_A 22 VCREFQR-GNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYI-KGRCMRE-KCKYFHPPA 79 (98)
T ss_dssp BCSHHHH-TCCSSHHHHCSSBCCSSCCSCCTTTCEEEBCHHHH-HTCCCCT-TCCSBCCCH
T ss_pred hhHHHhc-CcCCCCCCCCCCcCCchhccccccCCccccchhhc-cCCCCCC-CcCccCChH
Confidence 7888887 9999999 79999997532 344556898887 4999999 899888754
No 90
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.74 E-value=1.4 Score=35.10 Aligned_cols=51 Identities=27% Similarity=0.722 Sum_probs=40.4
Q ss_pred cceeeeccCCCCCCCcccccCCchhhhhhccccchhhhccccCCCCCCcccccccC
Q 008383 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
+|.-|.+ |.|..|+.|+|.|+..... ..+|..|+..|.+. |.+|.+.|...
T Consensus 12 ~C~~fl~-G~C~~G~~C~fsH~~~~~~---~~~C~~f~~~G~C~-~~~C~f~H~~~ 62 (77)
T 2d9n_A 12 VCKHWLR-GLCKKGDQCEFLHEYDMTK---MPECYFYSKFGECS-NKECPFLHIDP 62 (77)
T ss_dssp BCHHHHT-TCCSCTTSSSSBCSCCTTT---SCBCHHHHHTCCCC-CSSCSSBCCCT
T ss_pred eCHhHcc-CcCCCCCCCCCccccccCc---CCCCcccCCCCccC-CCCeeccCCCc
Confidence 6776666 8999999999999975432 23688887779998 88999998765
No 91
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=69.02 E-value=2 Score=33.77 Aligned_cols=52 Identities=27% Similarity=0.712 Sum_probs=37.9
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhhhccccchhhhccccCCCCCCcccccccC
Q 008383 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQ 370 (567)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 370 (567)
.+|.-|.+ |.|..|+.|+|.|+..... ..+|..|+..|.+.. .+|.+.|...
T Consensus 17 ~vCk~fl~-G~C~~G~~C~fsH~~~~~~---~~~C~~f~~~G~C~~-~~C~y~H~~p 68 (72)
T 2rhk_C 17 VVCKHWLR-GLCKKGDQCEFLHEYDMTK---MSECYFYSKFGECSN-KECPFLHIDP 68 (72)
T ss_dssp SBCHHHHT-TCCCCGGGSSSBCSCCTTS---CCBCHHHHHHSCCSB-TTCCSBCCCC
T ss_pred eeCHHHhc-CCCCCCCCCCCcccccccc---CCcccccCCCCCCCC-CCeeccCCCc
Confidence 37876666 9999999999999975432 336877776677776 6777776543
No 92
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=63.45 E-value=10 Score=40.58 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=65.4
Q ss_pred CEEEEEcCCCC--C-H--HHHHHHHHHHHh----------hcCCCcEEEEecCCCCCCh---------------------
Q 008383 4 PRILLCGDVLG--R-L--NQLFKRVQSVNK----------SAGPFDAVLCVGQFFPDSS--------------------- 47 (567)
Q Consensus 4 ~KILv~GDvhG--~-~--~~l~~kv~~l~~----------k~GpfD~vi~~GDff~~~~--------------------- 47 (567)
.+|++++|+|= + + ..-++++..+.. ....+.-||++||......
T Consensus 201 ~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~~ 280 (476)
T 3e0j_A 201 RFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASV 280 (476)
T ss_dssp CEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHHH
T ss_pred CEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhhH
Confidence 58999999883 2 1 222333322221 1225899999999865411
Q ss_pred hhHHHHHHHhcccCCCCccEEEEccCCCChHHHHHHHhccccccC-cccCCceecccEEEeCCCCeEEEcCeEEEEEecc
Q 008383 48 ELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQG-FKMDGFKVTDNLFWLKGSGNFTLHGLSVAYLSGR 126 (567)
Q Consensus 48 ~~~~~~~~~l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~-~~~~~~~i~~Nl~~Lg~~gv~~~~GlrIa~lgG~ 126 (567)
...+++..||.. ....+|+.++|||||-.... +++...... |.. ... -.|+..+..--.++++|++|.+.+|.
T Consensus 281 ~~~~~ld~~L~~-l~~~i~V~lmPG~~DP~~~~---lPQqplh~~lfp~-s~~-~~~~~~vtNP~~~~i~G~~~LgtsGq 354 (476)
T 3e0j_A 281 EAVKMLDEILLQ-LSASVPVDVMPGEFDPTNYT---LPQQPLHPCMFPL-ATA-YSTLQLVTNPYQATIDGVRFLGTSGQ 354 (476)
T ss_dssp HHHHHHHHHHHH-HHTTSCEEEECCTTSSSCSS---SSCCCCCTTSCHH-HHT-STTEEECCSSEEEEETTEEEEECSSH
T ss_pred HHHHHHHHHHHh-cccCceEEecCCCCCccccc---CCCCCcCHHHhhh-hhh-cCccEEeCCCeEEEECCEEEEEECCC
Confidence 123455666643 23468999999999833111 110000000 000 000 13666666655668999999999997
Q ss_pred c
Q 008383 127 Q 127 (567)
Q Consensus 127 ~ 127 (567)
.
T Consensus 355 n 355 (476)
T 3e0j_A 355 N 355 (476)
T ss_dssp H
T ss_pred C
Confidence 3
No 93
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=63.20 E-value=31 Score=29.04 Aligned_cols=67 Identities=13% Similarity=0.180 Sum_probs=43.7
Q ss_pred CCCCEEEEEcCC---------------CCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCc
Q 008383 1 MSPPRILLCGDV---------------LGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 1 M~~~KILv~GDv---------------hG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ 65 (567)
|..|||.|+||. --+-+++.+.++++-+.. .+.+|++.=++... ..+.+..|. .....
T Consensus 1 m~~mkiaVIgD~dtv~GFrLaGi~~~~v~~~ee~~~~~~~l~~~~-digIIlIte~~a~~---i~~~i~~~~---~~~~~ 73 (109)
T 2d00_A 1 MVPVRMAVIADPETAQGFRLAGLEGYGASSAEEAQSLLETLVERG-GYALVAVDEALLPD---PERAVERLM---RGRDL 73 (109)
T ss_dssp CCCCCEEEEECHHHHHHHHHTTSEEEECSSHHHHHHHHHHHHHHC-CCSEEEEETTTCSC---HHHHHHHHT---TCCCC
T ss_pred CCccEEEEEeCHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHhhCC-CeEEEEEeHHHHHh---hHHHHHHHH---hCCCC
Confidence 899999999992 123455666666665543 58899999888763 233556663 24456
Q ss_pred c-EEEEccCC
Q 008383 66 P-TYFIGDYG 74 (567)
Q Consensus 66 p-tyfv~GN~ 74 (567)
| ++.||+.+
T Consensus 74 P~Il~IPs~~ 83 (109)
T 2d00_A 74 PVLLPIAGLK 83 (109)
T ss_dssp CEEEEESCGG
T ss_pred eEEEEECCCc
Confidence 7 46667765
No 94
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=54.44 E-value=14 Score=31.72 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=37.0
Q ss_pred CC--CCEEEEEcCCCCCHHHHHHHHHHH---------------Hh-hcCCCcEEEEecCCCCCChhhHHHHHHHhcccCC
Q 008383 1 MS--PPRILLCGDVLGRLNQLFKRVQSV---------------NK-SAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62 (567)
Q Consensus 1 M~--~~KILv~GDvhG~~~~l~~kv~~l---------------~~-k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~ 62 (567)
|+ ++|||++=|-.-....+-..++.. .. +..+||++|+ |+.-++-...+ +.+.+ .+
T Consensus 4 m~~r~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~~G~e-l~~~l---r~ 77 (123)
T 2lpm_A 4 MTERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGEPSYP-VADIL---AE 77 (123)
T ss_dssp CCCCCCCEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSCCSHH-HHHHH---HH
T ss_pred CCCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCCCHHH-HHHHH---Hc
Confidence 66 689999999776544443333221 00 1236888777 76444322222 22232 12
Q ss_pred CCccEEEEccCC
Q 008383 63 IPIPTYFIGDYG 74 (567)
Q Consensus 63 ~p~ptyfv~GN~ 74 (567)
..+|++|+.|+.
T Consensus 78 ~~ipvI~lTa~~ 89 (123)
T 2lpm_A 78 RNVPFIFATGYG 89 (123)
T ss_dssp TCCSSCCBCTTC
T ss_pred CCCCEEEEecCc
Confidence 347788887754
No 95
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=52.90 E-value=26 Score=28.63 Aligned_cols=18 Identities=22% Similarity=0.230 Sum_probs=12.4
Q ss_pred CCCCEEEEEcCCCCCHHH
Q 008383 1 MSPPRILLCGDVLGRLNQ 18 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~ 18 (567)
|+++|||++.|-......
T Consensus 1 M~~~~ilivdd~~~~~~~ 18 (127)
T 3i42_A 1 MSLQQALIVEDYQAAAET 18 (127)
T ss_dssp -CCEEEEEECSCHHHHHH
T ss_pred CCcceEEEEcCCHHHHHH
Confidence 888899999996554333
No 96
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=51.13 E-value=12 Score=40.40 Aligned_cols=76 Identities=9% Similarity=0.054 Sum_probs=39.7
Q ss_pred CCHHHHHHHHH-hhcCCCCccEEEeCCCCccccccccccc--cccccCCCCCCcHHHHHHHHHhCCC--EEEEccCCCcc
Q 008383 137 YSQDDVDALRA-LAEEPGIVDLFLTNEWPSGVTNKAAASD--MLVGISDSSNTDSTVSELVAEIKPR--YHIAGSKGVFY 211 (567)
Q Consensus 137 ~t~~dv~~L~~-~~~~~~~vDILLTh~wP~gI~~~~~~~~--~~~~~~~~~~Gs~~i~~l~~~lkPR--Yhf~Gh~~~fy 211 (567)
+-+++.+-|+. |......--|+++|.+-..+........ ..+........-..+-.++.+.+.+ .+|+||.|.++
T Consensus 306 lG~~Q~~WL~~~L~~s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~ 385 (527)
T 2yeq_A 306 LGKEQEQWLFNNLGSSTAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASW 385 (527)
T ss_dssp SCHHHHHHHHHHHHHCCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEE
T ss_pred cCHHHHHHHHHHHhcCCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHh
Confidence 44666666665 3333345568888877655421100000 0000000011233566677777775 99999998775
Q ss_pred c
Q 008383 212 A 212 (567)
Q Consensus 212 E 212 (567)
-
T Consensus 386 ~ 386 (527)
T 2yeq_A 386 A 386 (527)
T ss_dssp E
T ss_pred H
Confidence 4
No 97
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=51.12 E-value=32 Score=29.18 Aligned_cols=17 Identities=35% Similarity=0.466 Sum_probs=10.2
Q ss_pred CC-CCEEEEEcCCCCCHH
Q 008383 1 MS-PPRILLCGDVLGRLN 17 (567)
Q Consensus 1 M~-~~KILv~GDvhG~~~ 17 (567)
|. ++|||++.|-.....
T Consensus 1 M~~~~~ILivddd~~~~~ 18 (152)
T 3heb_A 1 MSLSVTIVMIEDDLGHAR 18 (152)
T ss_dssp ----CEEEEECCCHHHHH
T ss_pred CCCCceEEEEeCCHHHHH
Confidence 65 689999998654333
No 98
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=49.22 E-value=33 Score=36.41 Aligned_cols=116 Identities=13% Similarity=0.165 Sum_probs=64.0
Q ss_pred CCEEEEEcCCCC-----CHHHHHHHHHHHHhhcCCCcEEEEecCCCCCC------------------hh-hHHHHHHH--
Q 008383 3 PPRILLCGDVLG-----RLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDS------------------SE-LLDEFMNY-- 56 (567)
Q Consensus 3 ~~KILv~GDvhG-----~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~------------------~~-~~~~~~~~-- 56 (567)
.++|+|+....- +++.|.+.++.++++ .+.|+||.+|.|.... .. ..+-|...
T Consensus 147 ~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~-~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 147 SLKVIVTCGPYFANDNFSLELLQEFIDSINNE-VKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp CEEEEEEESCCSCSSCCCCHHHHHHHHHCCCC-CCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CcEEEEEeCCccCCCccChHHHHHHHHHHHhc-cCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 467776665443 345555555555432 2579999999996431 01 11223333
Q ss_pred --hcccCCCCccEEEEccCCCChHHHHHHHhccccccCcccCCceecc-cEEEeCCCCeEEEcCeEEEEEec
Q 008383 57 --VEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTD-NLFWLKGSGNFTLHGLSVAYLSG 125 (567)
Q Consensus 57 --l~g~~~~p~ptyfv~GN~~~~~~~~~~l~~~~~~~~~~~~~~~i~~-Nl~~Lg~~gv~~~~GlrIa~lgG 125 (567)
+.. ..-.+-+++|||++|.... -..+++.. |......+.. |++++..=..+.++|+.|+..+.
T Consensus 226 ~il~~-l~~~t~VVlVPS~rD~~~~-~~v~PQPp----f~~k~l~l~k~nv~~~sNPc~~~in~v~igvss~ 291 (460)
T 3flo_A 226 PILKT-ISPHIQTVLIPSTKDAISN-HAAYPQAS----LIRKALQLPKRNFKCMANPSSFQINEIYFGCSNV 291 (460)
T ss_dssp HHHTT-SCTTSEEEEECCTTBTTCS-CCSBSBCC----CCTTTTTCCTTTEEECCBSEEEEETTEEEEECCS
T ss_pred HHHHh-ccCCCEEEEeCCcccccCC-CCCcCCCC----CChhhhcCCcccEEEeCCCEEEEECCEEEEEEcH
Confidence 321 1223568999999985310 00112111 1111112344 99999988888999999975544
No 99
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=48.12 E-value=37 Score=28.42 Aligned_cols=15 Identities=20% Similarity=0.337 Sum_probs=10.6
Q ss_pred CCEEEEEcCCCCCHH
Q 008383 3 PPRILLCGDVLGRLN 17 (567)
Q Consensus 3 ~~KILv~GDvhG~~~ 17 (567)
++|||++.|-.....
T Consensus 5 ~~~ILivdd~~~~~~ 19 (144)
T 3kht_A 5 SKRVLVVEDNPDDIA 19 (144)
T ss_dssp CEEEEEECCCHHHHH
T ss_pred CCEEEEEeCCHHHHH
Confidence 679999998554333
No 100
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=45.71 E-value=44 Score=27.79 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=12.2
Q ss_pred CCCCEEEEEcCCCCCHHHH
Q 008383 1 MSPPRILLCGDVLGRLNQL 19 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l 19 (567)
|.++|||++.|-......+
T Consensus 1 M~~~~ilivdd~~~~~~~l 19 (143)
T 3jte_A 1 MSLAKILVIDDESTILQNI 19 (143)
T ss_dssp --CCEEEEECSCHHHHHHH
T ss_pred CCCCEEEEEcCCHHHHHHH
Confidence 8888999999865544333
No 101
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=43.34 E-value=63 Score=26.38 Aligned_cols=15 Identities=13% Similarity=0.255 Sum_probs=9.1
Q ss_pred CCCCEEEEEcCCCCC
Q 008383 1 MSPPRILLCGDVLGR 15 (567)
Q Consensus 1 M~~~KILv~GDvhG~ 15 (567)
|.++|||++.|-...
T Consensus 3 ~~~~~iLivdd~~~~ 17 (129)
T 3h1g_A 3 LGSMKLLVVDDSSTM 17 (129)
T ss_dssp ---CCEEEECSCHHH
T ss_pred CCCcEEEEEeCCHHH
Confidence 456889999885543
No 102
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=40.72 E-value=56 Score=27.09 Aligned_cols=14 Identities=29% Similarity=0.408 Sum_probs=10.3
Q ss_pred CCCCEEEEEcCCCC
Q 008383 1 MSPPRILLCGDVLG 14 (567)
Q Consensus 1 M~~~KILv~GDvhG 14 (567)
|.+.+||++.|-..
T Consensus 2 m~~~~iLivdd~~~ 15 (136)
T 3t6k_A 2 MKPHTLLIVDDDDT 15 (136)
T ss_dssp -CCCEEEEECSCHH
T ss_pred CCCCEEEEEeCCHH
Confidence 67789999988554
No 103
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=39.91 E-value=40 Score=29.16 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=11.2
Q ss_pred CC-CCEEEEEcCCCCCH
Q 008383 1 MS-PPRILLCGDVLGRL 16 (567)
Q Consensus 1 M~-~~KILv~GDvhG~~ 16 (567)
|. .+||||+=|-....
T Consensus 9 m~k~~rILiVDD~~~~r 25 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMR 25 (134)
T ss_dssp CCTTCCEEEECSCHHHH
T ss_pred hCCCCEEEEEeCCHHHH
Confidence 44 57999998865543
No 104
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=38.19 E-value=75 Score=26.14 Aligned_cols=17 Identities=41% Similarity=0.620 Sum_probs=11.8
Q ss_pred CCEEEEEcCCCCCHHHH
Q 008383 3 PPRILLCGDVLGRLNQL 19 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l 19 (567)
++|||++.|-......+
T Consensus 6 ~~~iLivdd~~~~~~~l 22 (140)
T 3grc_A 6 RPRILICEDDPDIARLL 22 (140)
T ss_dssp CSEEEEECSCHHHHHHH
T ss_pred CCCEEEEcCCHHHHHHH
Confidence 57999999866544433
No 105
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=37.62 E-value=1.1e+02 Score=25.05 Aligned_cols=15 Identities=33% Similarity=0.142 Sum_probs=10.7
Q ss_pred CCCCEEEEEcCCCCC
Q 008383 1 MSPPRILLCGDVLGR 15 (567)
Q Consensus 1 M~~~KILv~GDvhG~ 15 (567)
|+.++||++.|-...
T Consensus 1 m~~~~ILivdd~~~~ 15 (138)
T 3c3m_A 1 MSLYTILVVDDSPMI 15 (138)
T ss_dssp -CCCEEEEECSCHHH
T ss_pred CCcceEEEEeCCHHH
Confidence 777799999985543
No 106
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=36.58 E-value=92 Score=25.83 Aligned_cols=71 Identities=14% Similarity=0.063 Sum_probs=35.8
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHH--------------Hh-hcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccE
Q 008383 3 PPRILLCGDVLGRLNQLFKRVQSV--------------NK-SAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPT 67 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l~~kv~~l--------------~~-k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~pt 67 (567)
.+|||++.|-......+-..+... .. +..++|+||+=-++...+ ..+-+..+........+|+
T Consensus 8 ~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~--g~~~~~~l~~~~~~~~~pi 85 (147)
T 2zay_A 8 WWRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKIS--GMDLFNSLKKNPQTASIPV 85 (147)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSC--HHHHHHHHHTSTTTTTSCE
T ss_pred CceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCC--HHHHHHHHHcCcccCCCCE
Confidence 578999999776555544433321 00 112578777754443321 1222223321112345777
Q ss_pred EEEccCCC
Q 008383 68 YFIGDYGV 75 (567)
Q Consensus 68 yfv~GN~~ 75 (567)
+++.+..+
T Consensus 86 i~ls~~~~ 93 (147)
T 2zay_A 86 IALSGRAT 93 (147)
T ss_dssp EEEESSCC
T ss_pred EEEeCCCC
Confidence 77777543
No 107
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=35.53 E-value=62 Score=27.49 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=40.3
Q ss_pred CCCCEEEEEcCC---------------CCCHHHHHHHHHHHHhhcCCCcEEEEecCCCCCChhhHHHHHHHhcccCCCCc
Q 008383 1 MSPPRILLCGDV---------------LGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPI 65 (567)
Q Consensus 1 M~~~KILv~GDv---------------hG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ 65 (567)
|+ |||.|+||. --+-+++.+.++++-+. .+.+|++.=++...- .+.+.+| .+...
T Consensus 1 m~-mKiaVIGD~Dtv~GFrLaGie~~~v~~~ee~~~~~~~l~~~--digIIlIte~ia~~i---~~~i~~~----~~~~~ 70 (115)
T 3aon_B 1 MT-YKIGVVGDKDSVSPFRLFGFDVQHGTTKTEIRKTIDEMAKN--EYGVIYITEQCANLV---PETIERY----KGQLT 70 (115)
T ss_dssp CE-EEEEEESCHHHHGGGGGGTCEEECCCSHHHHHHHHHHHHHT--TEEEEEEEHHHHTTC---HHHHHHH----HTSSS
T ss_pred Cc-eEEEEEECHHHHHHHHHcCCeEEEeCCHHHHHHHHHHHHhc--CceEEEEeHHHHHHh---HHHHHHH----hCCCC
Confidence 55 799999992 22446666667776654 578888887765432 2355565 23335
Q ss_pred c-EEEEccCCC
Q 008383 66 P-TYFIGDYGV 75 (567)
Q Consensus 66 p-tyfv~GN~~ 75 (567)
| ++.||+.+.
T Consensus 71 P~IveIPs~~g 81 (115)
T 3aon_B 71 PAIILIPSHQG 81 (115)
T ss_dssp CEEEEECBTTB
T ss_pred CEEEEECCCCC
Confidence 6 456776553
No 108
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=34.24 E-value=87 Score=25.78 Aligned_cols=20 Identities=20% Similarity=0.012 Sum_probs=12.2
Q ss_pred CC-CCEEEEEcCCCCCHHHHH
Q 008383 1 MS-PPRILLCGDVLGRLNQLF 20 (567)
Q Consensus 1 M~-~~KILv~GDvhG~~~~l~ 20 (567)
|+ ++|||++.|-......+-
T Consensus 1 M~~~~~ilivdd~~~~~~~l~ 21 (140)
T 3lua_A 1 MSLDGTVLLIDYFEYEREKTK 21 (140)
T ss_dssp --CCCEEEEECSCHHHHHHHH
T ss_pred CCCCCeEEEEeCCHHHHHHHH
Confidence 66 679999998655444333
No 109
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=30.39 E-value=1.2e+02 Score=24.90 Aligned_cols=15 Identities=7% Similarity=-0.031 Sum_probs=10.8
Q ss_pred CCEEEEEcCCCCCHH
Q 008383 3 PPRILLCGDVLGRLN 17 (567)
Q Consensus 3 ~~KILv~GDvhG~~~ 17 (567)
+++||++.|-.....
T Consensus 7 ~~~iLivdd~~~~~~ 21 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRI 21 (142)
T ss_dssp CCEEEEECSCHHHHH
T ss_pred CCeEEEEcCCHHHHH
Confidence 689999998654333
No 110
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=28.38 E-value=1.8e+02 Score=23.31 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=8.7
Q ss_pred CCCCEEEEEcCCCC
Q 008383 1 MSPPRILLCGDVLG 14 (567)
Q Consensus 1 M~~~KILv~GDvhG 14 (567)
|. .|||++.|-.-
T Consensus 1 m~-~~ILivdd~~~ 13 (122)
T 3gl9_A 1 MS-KKVLLVDDSAV 13 (122)
T ss_dssp -C-CEEEEECSCHH
T ss_pred CC-ceEEEEeCCHH
Confidence 54 48999988544
No 111
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=28.15 E-value=1.1e+02 Score=25.16 Aligned_cols=16 Identities=13% Similarity=0.198 Sum_probs=10.9
Q ss_pred CCCEEEEEcCCCCCHH
Q 008383 2 SPPRILLCGDVLGRLN 17 (567)
Q Consensus 2 ~~~KILv~GDvhG~~~ 17 (567)
..+|||++.|-.....
T Consensus 5 ~~~~iLivdd~~~~~~ 20 (149)
T 1k66_A 5 ATQPLLVVEDSDEDFS 20 (149)
T ss_dssp TTSCEEEECCCHHHHH
T ss_pred CCccEEEEECCHHHHH
Confidence 4678999988654433
No 112
>2f5g_A Transposase, putative; dimer, stem-loop binding, gene regulation; 1.70A {Sulfolobus solfataricus} SCOP: d.58.57.1 PDB: 2f4f_A 2ec2_A
Probab=28.07 E-value=2.5e+02 Score=23.51 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=40.7
Q ss_pred CeEEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCeeEEEEeecCcchhhHHHHHHHH
Q 008383 424 DHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIFNL 500 (567)
Q Consensus 424 gH~LIiP~~H~~s~~~~~~~~~~E~~~~~~~L~~~~~~~g~~~v~~E~~~~~~~H~hi~~vPvp~~~~~~~~~~F~~ 500 (567)
=|+.+++..-.+-+. ++.. ..+.+.|....+..+..++-|+.+ ..|+|+=+-+-|......+-..||.
T Consensus 15 yhi~~~~~~R~~v~~---~~~~---~~l~~~l~~~~~~~~~~i~a~~im---pdHvHllv~~~~~~~ls~~~~~lK~ 82 (133)
T 2f5g_A 15 YHFVWIPKHRRNTLV---NEIA---EYTKEVLKSIAEELGCEIIALEVM---PDHIHLFVNCPPRYAPSYLANYFKG 82 (133)
T ss_dssp EEEEECBSSCTTCSC---HHHH---HHHHHHHHHHHHHHTCEEEEEEEE---TTEEEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEEecCcchhhhc---hhHH---HHHHHHHHHHHHhCCeEEeeeeec---CCcEEEEEEecCCccHHHHHHHHhh
Confidence 377777777776544 2333 345556666666677777666622 4588887766565444444445554
No 113
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=27.95 E-value=78 Score=26.10 Aligned_cols=14 Identities=29% Similarity=0.152 Sum_probs=9.6
Q ss_pred CCCCEEEEEcCCCC
Q 008383 1 MSPPRILLCGDVLG 14 (567)
Q Consensus 1 M~~~KILv~GDvhG 14 (567)
|+++|||++.|-.-
T Consensus 1 M~~~~iLivdd~~~ 14 (140)
T 3n53_A 1 MSLKKILIIDQQDF 14 (140)
T ss_dssp --CCEEEEECSCHH
T ss_pred CCCCEEEEEeCCHH
Confidence 88889999988544
No 114
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=26.80 E-value=62 Score=31.54 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=22.2
Q ss_pred CCCCEEEEEcCC---------------C-CCHHHHHHHHHHHHhhcCCCcEEEEecC
Q 008383 1 MSPPRILLCGDV---------------L-GRLNQLFKRVQSVNKSAGPFDAVLCVGQ 41 (567)
Q Consensus 1 M~~~KILv~GDv---------------h-G~~~~l~~kv~~l~~k~GpfD~vi~~GD 41 (567)
|.+||||+++.. . |-.......+.+...+.| +++.+++.+
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G-~~v~v~~~~ 56 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELG-HEVFLLGAP 56 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTT-CEEEEESCT
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcC-CeEEEEecC
Confidence 888999999987 1 434433333333333445 677776644
No 115
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=26.46 E-value=1.6e+02 Score=23.70 Aligned_cols=14 Identities=29% Similarity=0.589 Sum_probs=8.7
Q ss_pred CC-CCEEEEEcCCCC
Q 008383 1 MS-PPRILLCGDVLG 14 (567)
Q Consensus 1 M~-~~KILv~GDvhG 14 (567)
|. ++|||++.|-..
T Consensus 1 M~~~~~ilivdd~~~ 15 (133)
T 3nhm_A 1 MSLKPKVLIVENSWT 15 (133)
T ss_dssp ----CEEEEECSCHH
T ss_pred CCCCCEEEEEcCCHH
Confidence 54 689999988544
No 116
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.44 E-value=84 Score=27.71 Aligned_cols=15 Identities=27% Similarity=0.102 Sum_probs=10.1
Q ss_pred CCCCEEEEEcCCCCC
Q 008383 1 MSPPRILLCGDVLGR 15 (567)
Q Consensus 1 M~~~KILv~GDvhG~ 15 (567)
|.++|||++.|-.-.
T Consensus 5 m~~~~iLivdd~~~~ 19 (184)
T 3rqi_A 5 MSDKNFLVIDDNEVF 19 (184)
T ss_dssp --CCEEEEECSCHHH
T ss_pred CCCCeEEEEcCCHHH
Confidence 667899999985543
No 117
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=26.21 E-value=1.8e+02 Score=23.21 Aligned_cols=15 Identities=20% Similarity=0.062 Sum_probs=10.6
Q ss_pred CCEEEEEcCCCCCHH
Q 008383 3 PPRILLCGDVLGRLN 17 (567)
Q Consensus 3 ~~KILv~GDvhG~~~ 17 (567)
.+|||++.|-.....
T Consensus 7 ~~~ilivdd~~~~~~ 21 (130)
T 3eod_A 7 GKQILIVEDEQVFRS 21 (130)
T ss_dssp TCEEEEECSCHHHHH
T ss_pred CCeEEEEeCCHHHHH
Confidence 579999988655433
No 118
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=25.49 E-value=1.3e+02 Score=25.26 Aligned_cols=15 Identities=20% Similarity=0.237 Sum_probs=10.6
Q ss_pred CCEEEEEcCCCCCHH
Q 008383 3 PPRILLCGDVLGRLN 17 (567)
Q Consensus 3 ~~KILv~GDvhG~~~ 17 (567)
++|||++.|-.....
T Consensus 7 ~~~ILivdd~~~~~~ 21 (154)
T 3gt7_A 7 AGEILIVEDSPTQAE 21 (154)
T ss_dssp CCEEEEECSCHHHHH
T ss_pred CCcEEEEeCCHHHHH
Confidence 578999998554333
No 119
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=24.87 E-value=1.3e+02 Score=24.42 Aligned_cols=17 Identities=24% Similarity=0.079 Sum_probs=10.9
Q ss_pred CCEEEEEcCCCCCHHHH
Q 008383 3 PPRILLCGDVLGRLNQL 19 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l 19 (567)
.++||++.|-......+
T Consensus 8 ~~~iLivdd~~~~~~~l 24 (143)
T 3cnb_A 8 DFSILIIEDDKEFADML 24 (143)
T ss_dssp -CEEEEECSCHHHHHHH
T ss_pred CceEEEEECCHHHHHHH
Confidence 57899998865544433
No 120
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=24.44 E-value=1.2e+02 Score=25.04 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHhhcCCCcEEEEecCCCC
Q 008383 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFP 44 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~~kv~~l~~k~GpfD~vi~~GDff~ 44 (567)
|..+|||++-..--.-.-+.++++++.++.| .|+-+-+.++-.
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~g-i~~~i~a~~~~~ 43 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYE-VPVIIEAFPETL 43 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSC-CSEEEEEECSSS
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCC-CCeEEEEecHHH
Confidence 6766787665444455578889999888886 777777777644
No 121
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=24.15 E-value=1.9e+02 Score=23.06 Aligned_cols=15 Identities=27% Similarity=0.197 Sum_probs=10.9
Q ss_pred CCCCEEEEEcCCCCC
Q 008383 1 MSPPRILLCGDVLGR 15 (567)
Q Consensus 1 M~~~KILv~GDvhG~ 15 (567)
|.++|||++.|-...
T Consensus 3 m~~~~ilivdd~~~~ 17 (132)
T 2rdm_A 3 LEAVTILLADDEAIL 17 (132)
T ss_dssp CSSCEEEEECSSHHH
T ss_pred CCCceEEEEcCcHHH
Confidence 446899999986543
No 122
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=22.95 E-value=2.5e+02 Score=22.20 Aligned_cols=13 Identities=31% Similarity=0.409 Sum_probs=9.0
Q ss_pred CCCCEEEEEcCCCC
Q 008383 1 MSPPRILLCGDVLG 14 (567)
Q Consensus 1 M~~~KILv~GDvhG 14 (567)
|. .|||++.|-..
T Consensus 1 m~-~~ilivdd~~~ 13 (120)
T 3f6p_A 1 MD-KKILVVDDEKP 13 (120)
T ss_dssp CC-CEEEEECSCHH
T ss_pred CC-CeEEEEECCHH
Confidence 54 48999988544
No 123
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=22.78 E-value=1.4e+02 Score=24.41 Aligned_cols=17 Identities=18% Similarity=0.079 Sum_probs=11.4
Q ss_pred CCEEEEEcCCCCCHHHH
Q 008383 3 PPRILLCGDVLGRLNQL 19 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l 19 (567)
++|||++.|-......+
T Consensus 7 ~~~ILivdd~~~~~~~l 23 (143)
T 2qvg_A 7 KVDILYLEDDEVDIQSV 23 (143)
T ss_dssp CCSEEEECCCHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHH
Confidence 46899999866544433
No 124
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.44 E-value=1.2e+02 Score=25.28 Aligned_cols=14 Identities=50% Similarity=0.574 Sum_probs=9.3
Q ss_pred CC-CCEEEEEcCCCC
Q 008383 1 MS-PPRILLCGDVLG 14 (567)
Q Consensus 1 M~-~~KILv~GDvhG 14 (567)
|. .+|||++.|-..
T Consensus 1 M~~~~~ILivdd~~~ 15 (151)
T 3kcn_A 1 MSLNERILLVDDDYS 15 (151)
T ss_dssp --CCCEEEEECSCHH
T ss_pred CCCCCeEEEEeCCHH
Confidence 55 579999988543
No 125
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=21.91 E-value=2e+02 Score=22.36 Aligned_cols=67 Identities=15% Similarity=0.174 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCCCCCHHHHH---HHHHHHHhhcC-CCcEEEEecCCCCCChhhHHHHHHHhcccCCCCccEEEEccCCC
Q 008383 1 MSPPRILLCGDVLGRLNQLF---KRVQSVNKSAG-PFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIPIPTYFIGDYGV 75 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~---~kv~~l~~k~G-pfD~vi~~GDff~~~~~~~~~~~~~l~g~~~~p~ptyfv~GN~~ 75 (567)
|. ||.+.+-..+.+-+.+ .++.++..+.| +|+.+=+..| ....+++.+.. |.....+|++|++|.+-
T Consensus 1 M~--~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~-----~~~~~~l~~~~-g~~~~~vP~ifi~g~~i 71 (93)
T 1t1v_A 1 MS--GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD-----NALRDEMRTLA-GNPKATPPQIVNGNHYC 71 (93)
T ss_dssp CC--CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC-----HHHHHHHHHHT-TCTTCCSCEEEETTEEE
T ss_pred CC--CEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC-----HHHHHHHHHHh-CCCCCCCCEEEECCEEE
Confidence 55 4555554444444322 23444444444 5555433222 22233444443 42245789999998654
No 126
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=21.17 E-value=1.2e+02 Score=24.10 Aligned_cols=20 Identities=15% Similarity=0.049 Sum_probs=11.2
Q ss_pred CCCCEEEEEcCCCCCHHHHH
Q 008383 1 MSPPRILLCGDVLGRLNQLF 20 (567)
Q Consensus 1 M~~~KILv~GDvhG~~~~l~ 20 (567)
|-++|||++.|-......+-
T Consensus 3 mm~~~ilivdd~~~~~~~l~ 22 (127)
T 2gkg_A 3 HMSKKILIVESDTALSATLR 22 (127)
T ss_dssp ---CEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHH
Confidence 33468999998655443333
No 127
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=20.90 E-value=2.6e+02 Score=22.44 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=11.4
Q ss_pred CCEEEEEcCCCCCHHHH
Q 008383 3 PPRILLCGDVLGRLNQL 19 (567)
Q Consensus 3 ~~KILv~GDvhG~~~~l 19 (567)
++|||++.|-......+
T Consensus 7 ~~~ilivdd~~~~~~~l 23 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREAL 23 (136)
T ss_dssp CCEEEEECSCHHHHHHH
T ss_pred CCeEEEECCCHHHHHHH
Confidence 57899999865543333
No 128
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.59 E-value=1.5e+02 Score=24.14 Aligned_cols=17 Identities=18% Similarity=0.307 Sum_probs=10.6
Q ss_pred CC-CCEEEEEcCCCCCHH
Q 008383 1 MS-PPRILLCGDVLGRLN 17 (567)
Q Consensus 1 M~-~~KILv~GDvhG~~~ 17 (567)
|+ ++|||++.|-.....
T Consensus 1 M~~~~~iLivdd~~~~~~ 18 (142)
T 2qxy_A 1 MSLTPTVMVVDESRITFL 18 (142)
T ss_dssp --CCCEEEEECSCHHHHH
T ss_pred CCCCCeEEEEeCCHHHHH
Confidence 66 579999988654333
No 129
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.46 E-value=26 Score=27.15 Aligned_cols=29 Identities=28% Similarity=0.887 Sum_probs=23.2
Q ss_pred CcceeeeccCCCCCCCcccccCCchhhhhh
Q 008383 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQC 343 (567)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (567)
..|..| ..|.|+-|+.|.|.|-...-.+.
T Consensus 21 ~LC~~~-~~G~C~~G~~C~FAHG~~ELr~~ 49 (69)
T 2d9m_A 21 SICDRY-MNGTCPEGNSCKFAHGNAELHEW 49 (69)
T ss_dssp SBCHHH-HHSCCSSCSSCSSBSSHHHHHHH
T ss_pred ccCccc-CcCCCCCCCccCCcCCHHHHhhH
Confidence 378888 78999999999999997654443
No 130
>2pof_A CDP-diacylglycerol pyrophosphatase; NYSGXRC, PFAM02611, PSI-2, phospholipid biosynthesis structural genomics, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.13.1.4
Probab=20.15 E-value=1.9e+02 Score=27.55 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=55.3
Q ss_pred CCCeEEEEeccccCCCCCC------CHHHHHHHHHHHHHHHHHHHh-cCCceEEEEe--cCCCC---CeeEEEEeecCcc
Q 008383 422 VEDHVLVIPVEHVPNTIST------SPECEKELGRFQNSLMMYYKN-QGKEAVFFEW--LSKRG---THANLQAVPIPTS 489 (567)
Q Consensus 422 ~~gH~LIiP~~H~~s~~~~------~~~~~~E~~~~~~~L~~~~~~-~g~~~v~~E~--~~~~~---~H~hi~~vPvp~~ 489 (567)
-+-|.|+||...+.-+.+- .+..|.+-+.-+..+.+.+.+ ..-..+..++ ...|+ -|.||=|+=
T Consensus 48 Gp~qyLLmPt~rItGIEsP~Ll~~~~pnYf~~AW~aR~~v~~~~g~pipd~~lsLaINS~~gRSQnQLHIHIsClr---- 123 (227)
T 2pof_A 48 GPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIR---- 123 (227)
T ss_dssp SSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHTSCCCGGGEEEEEBCGGGCSCCSCCEEEEEBC----
T ss_pred CCceEEEeccccccCccChhhcCCCCCcHHHHHHHHhHHHHHhhCCCCCccceEEEecCCCCccccceeeehhhCC----
Confidence 4558999999999988862 456788888877777776654 2223344551 12232 355555542
Q ss_pred hhhHHHHHHHHHHHHcCCcceecc
Q 008383 490 KAAAVQDIFNLAAEKLGFKFLATK 513 (567)
Q Consensus 490 ~~~~~~~~F~~~~~~~~~~~~~~~ 513 (567)
..+...+...+...+..|..++
T Consensus 124 --p~V~~~L~~~~~~i~~~W~~lp 145 (227)
T 2pof_A 124 --PDVREQLDNNLANISSRWLPLP 145 (227)
T ss_dssp --HHHHHHHHTTGGGCCSSCEECT
T ss_pred --HHHHHHHHHhccccCCCceECC
Confidence 4566777777777788898554
Done!