Query 008384
Match_columns 567
No_of_seqs 449 out of 2482
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 00:56:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008384.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008384hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4feh_A Oxidoreductase DPRE1; a 100.0 4.4E-42 1.5E-46 373.8 34.3 427 44-536 32-476 (481)
2 2vfr_A Xylitol oxidase, aldito 100.0 3.5E-41 1.2E-45 362.3 31.8 401 41-537 6-418 (422)
3 3js8_A Cholesterol oxidase; ch 100.0 2.4E-36 8E-41 329.4 30.5 436 44-536 18-536 (540)
4 2i0k_A Oxidoreductase; MIX alp 100.0 7E-35 2.4E-39 323.2 34.7 455 31-536 12-557 (561)
5 2exr_A Cytokinin dehydrogenase 100.0 8.1E-33 2.8E-37 304.5 32.2 435 45-530 51-513 (524)
6 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.1E-31 3.7E-36 291.4 35.8 213 31-257 16-234 (459)
7 1w1o_A Cytokinin dehydrogenase 100.0 1.2E-30 4.1E-35 288.2 39.8 202 45-257 58-270 (534)
8 3pm9_A Putative oxidoreductase 100.0 1.8E-31 6.3E-36 290.0 32.7 386 59-530 57-470 (476)
9 4bby_A Alkyldihydroxyacetoneph 100.0 4.4E-32 1.5E-36 306.2 28.5 204 49-257 198-409 (658)
10 3tsh_A Pollen allergen PHL P 4 100.0 1.2E-30 4E-35 286.2 32.4 219 31-256 24-252 (500)
11 3rja_A Carbohydrate oxidase; p 100.0 7.4E-30 2.5E-34 277.5 34.1 217 30-257 13-237 (473)
12 2uuu_A Alkyldihydroxyacetoneph 100.0 2.7E-29 9.1E-34 279.1 29.6 194 59-257 143-339 (584)
13 3fw9_A Reticuline oxidase; BI- 100.0 3E-29 1E-33 273.6 17.4 218 29-256 15-244 (495)
14 3vte_A Tetrahydrocannabinolic 100.0 6.6E-29 2.3E-33 271.7 18.3 218 30-257 24-253 (518)
15 1zr6_A Glucooligosaccharide ox 100.0 6.9E-28 2.3E-32 264.1 20.0 214 31-257 20-240 (503)
16 2y3s_A TAML; oxidoreductase; H 99.9 4.8E-27 1.6E-31 258.6 19.9 217 29-257 34-280 (530)
17 3pop_A GILR oxidase; FAD bindi 99.9 1.8E-27 6E-32 260.1 16.0 186 31-228 12-208 (501)
18 2wdx_A Putative hexose oxidase 99.9 5.4E-27 1.8E-31 258.0 19.4 217 30-257 33-278 (523)
19 2ipi_A Aclacinomycin oxidoredu 99.9 1.1E-26 3.6E-31 255.6 20.1 216 31-257 32-276 (521)
20 1wvf_A 4-cresol dehydrogenase 99.9 3.3E-25 1.1E-29 243.9 31.6 191 59-257 62-268 (520)
21 1e8g_A Vanillyl-alcohol oxidas 99.9 2.6E-25 9E-30 246.6 29.4 186 59-252 76-292 (560)
22 1f0x_A DLDH, D-lactate dehydro 99.9 8.5E-24 2.9E-28 233.6 11.9 192 59-257 51-297 (571)
23 2yvs_A Glycolate oxidase subun 99.8 1.3E-19 4.6E-24 177.0 13.4 116 118-238 1-121 (219)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.8 2.3E-19 8E-24 185.1 12.7 147 59-233 60-217 (322)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.8 3.6E-19 1.2E-23 184.4 12.9 147 59-231 54-209 (326)
26 3i99_A UDP-N-acetylenolpyruvoy 99.7 4.8E-18 1.6E-22 177.2 12.1 149 59-233 36-199 (357)
27 1uxy_A MURB, uridine diphospho 99.7 2.9E-17 9.9E-22 170.6 16.0 153 59-233 20-183 (340)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.7 1.6E-16 5.5E-21 159.6 9.7 154 59-256 27-187 (268)
29 1ffv_C CUTM, flavoprotein of c 97.8 1.3E-05 4.5E-10 81.0 5.9 111 104-231 47-177 (287)
30 2w3s_A Xanthine dehydrogenase; 96.9 0.00038 1.3E-08 74.8 3.0 112 104-230 218-345 (462)
31 1n62_C Carbon monoxide dehydro 96.4 0.0012 4.3E-08 66.5 2.9 109 104-230 47-176 (288)
32 1t3q_C Quinoline 2-oxidoreduct 94.9 0.0094 3.2E-07 60.0 2.3 108 104-229 46-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 94.9 0.026 8.9E-07 57.2 5.5 116 104-229 51-189 (305)
34 3hrd_C Nicotinate dehydrogenas 90.8 0.09 3.1E-06 53.0 2.3 147 63-228 9-176 (296)
35 3unc_A Xanthine dehydrogenase/ 82.1 1.5 5.1E-05 52.9 6.4 75 63-143 239-313 (1332)
36 1rm6_B 4-hydroxybenzoyl-COA re 69.2 0.68 2.3E-05 47.1 -1.2 59 104-165 46-117 (324)
37 1f0x_A DLDH, D-lactate dehydro 67.9 6.3 0.00022 43.1 6.1 99 392-530 455-554 (571)
38 3zyv_A AOH1; oxidoreductase, m 57.0 15 0.00051 44.4 7.1 39 105-143 282-320 (1335)
39 3fw9_A Reticuline oxidase; BI- 46.4 68 0.0023 34.2 9.5 55 477-531 408-486 (495)
40 1und_A Advillin, P92; actin bi 39.8 11 0.00039 25.3 1.4 20 501-520 1-22 (37)
41 1zr6_A Glucooligosaccharide ox 37.3 26 0.0009 37.4 4.5 54 478-531 410-471 (503)
42 3pop_A GILR oxidase; FAD bindi 31.4 26 0.0009 37.5 3.3 24 508-531 468-494 (501)
43 2y3s_A TAML; oxidoreductase; H 30.8 22 0.00075 38.4 2.6 25 508-532 494-521 (530)
44 2wdx_A Putative hexose oxidase 30.2 22 0.00076 38.2 2.5 25 508-532 490-517 (523)
45 2ipi_A Aclacinomycin oxidoredu 27.3 26 0.00089 37.7 2.4 25 508-532 486-513 (521)
46 1qzp_A Dematin; villin headpie 24.3 34 0.0012 26.2 1.9 20 501-520 32-53 (68)
47 3vte_A Tetrahydrocannabinolic 20.4 4.1E+02 0.014 28.2 10.2 55 477-531 431-505 (518)
No 1
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=4.4e-42 Score=373.75 Aligned_cols=427 Identities=17% Similarity=0.190 Sum_probs=282.4
Q ss_pred hcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEE
Q 008384 44 YLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDI 120 (567)
Q Consensus 44 ~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~i 120 (567)
++.| |..+ ...|. .|.+.++|+++++++++.+......++|+||++. +.+. .++|++|||++||+|+++
T Consensus 32 ~~~~-W~~~-~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~--~~~~----~~~gvvIdl~~l~~i~~~ 103 (481)
T 4feh_A 32 RLTG-WGRT-APSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYG--DNAQ----NGGGLVIDMTPLNTIHSI 103 (481)
T ss_dssp EECC-TTCC-SCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSS--STTC----CTTSEEEECTTCCCEEEE
T ss_pred eeec-ccCC-CCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCC--CCCC----CcCeEEEECccCCCceEE
Confidence 4677 6433 34444 7999999999999999873001345566666541 1111 258999999999999999
Q ss_pred eCCCcEEEEcCCCcHHHHHHHHccCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEEEEcC
Q 008384 121 DKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK 200 (567)
Q Consensus 121 d~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~~s~ 200 (567)
|+++++|+||||+++.+|.++|.++|+++|+.|+++.+||||++++++.|..+++||.++|+|+++++|++||+++++++
T Consensus 104 d~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~ 183 (481)
T 4feh_A 104 DADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTP 183 (481)
T ss_dssp ETTTTEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECS
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCC
Confidence 99999999999999999999999999999998999999999999765555556899999999999999999999999997
Q ss_pred CCCChhhhhhccccCCCceEEEEEEEEEEeccc-eeEEEEecCCCCHHHHHHHHHHHhCCCCCCCcCCCCccceEEEEEe
Q 008384 201 DNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKE-YMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIY 279 (567)
Q Consensus 201 ~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 279 (567)
+.+++||||+++||.|++||||+++|++.|.++ +...... .+.+++++++.+.+... .....+..|+
T Consensus 184 ~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~-~~~~l~~~~~~~~~~~~-----------~~~~~~~~w~ 251 (481)
T 4feh_A 184 TGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGD-VTASLDETIALHSDGSE-----------ARYTYSSAWF 251 (481)
T ss_dssp SSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEE-ECSSHHHHHHHHSSSGG-----------GGCSEEEEEE
T ss_pred CCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEE-eCCCHHHHHHHHHHHHh-----------cCCcEEEEEE
Confidence 447899999999999999999999999999886 3333333 35789998888754310 1245666666
Q ss_pred c-------CCceEEEEeecCChHHhhhc--cccccccc--ccccchhhHHHhhhhhcCcccccccccccccccCcceeec
Q 008384 280 T-------STEAVFMTGRYASKEEAKKK--GNVINSVG--WWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWE 348 (567)
Q Consensus 280 ~-------~~~~v~~~g~~~~~~~~~~~--~~~~~~~~--~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~~fw~ 348 (567)
. .++++++.+++.+....... ..++.... ...-|.. .....+.... ... +...+++.... .
T Consensus 252 d~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~--~p~~~l~~~~-~~~--~~~~~~~~~~~---~ 323 (481)
T 4feh_A 252 DAISAPPKLGRAAVSRGRLATVEQLPAKLRSEPLKFDAPQLLTLPDV--FPNGLANKYT-FGP--IGELWYRKSGT---Y 323 (481)
T ss_dssp CCSSCTTSTTCEEEEEEEECCGGGSCGGGGGSTTCCC----------------------------------CCSCC---E
T ss_pred eccCCCCCCCeEEEEeCCcCcccccccccccCccccccccccCCCcc--CcHHHHhHHH-HHH--HHHHHHhhCcc---c
Confidence 3 26788888887653322100 00000000 0000000 0000000000 000 00000000000 0
Q ss_pred cccccccCchhhhhhhhccCCChhhhhhHhhhchhhhcccCCceEEE-EEeeccccHHHHHHHHHHHhhcC-CceeeeeE
Q 008384 349 GKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQ-DMLVPLYKVGDALEWQHREVEVY-PLWLCPHR 426 (567)
Q Consensus 349 ~~~~~p~~~~~~~R~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~viq-Dv~VP~~~l~e~l~~l~~~~~~~-P~wlcp~~ 426 (567)
...+ +. .+.++ .|.+. -....++++....+| +++||.+ .+++|+.+.+++... .--++|+.
T Consensus 324 ~~~~-----~~-~~~~~---~p~d~-------v~~~nr~yg~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~~~~~~~v~ 386 (481)
T 4feh_A 324 RGKV-----QN-LTQFY---HPLDM-------FGEWNRAYGPAGFLQYQFVIPTE-AVDEFKKIIGVIQASGHYSFLNVF 386 (481)
T ss_dssp EEEE-----EE-HHHHH---C--------------CHHHHTTTSEEEEEEEEETT-CHHHHHHHHHHHHHTTCCCSCCEE
T ss_pred cccc-----cc-ceeee---chhhh-------ccccccccCCCCcEEEEEEeccc-HHHHHHHHHHHHHhcCCCceEEEE
Confidence 0000 00 01111 01100 001111222222555 9999999 999999998877653 34467888
Q ss_pred EecCCCCccCCCCCCCCCCcCCCCCCCCceeEEEEeecCCCCCCCCCccchhHHHHHHHHHHHHcCCcccccccccCCHH
Q 008384 427 LYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEK 506 (567)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~~~~~~~~~~~~~~~~r~lE~~v~~~gG~k~Lya~~y~t~~ 506 (567)
.|... +|+.|. |+.. +..+|.+-+|-.+ +..+++++||++++++||+.|+.+++.++.+
T Consensus 387 ~R~~~------~d~~~L-S~~~-----~~~tlal~~~~~~---------~~~~~~~~le~i~~~~gGRphw~K~~~~~~~ 445 (481)
T 4feh_A 387 KLFGP------RNQAPL-SFPI-----PGWNICVDFPIKD---------GLGKFVSELDRRVLEFGGRLYTAKDSRTTAE 445 (481)
T ss_dssp EEECC------CCSCTT-CCCC-----SEEEEEEEEECCT---------THHHHHHHHHHHHHHTTCEECGGGCSSCCHH
T ss_pred EEEeC------CCCccC-CCCC-----CceEEEEEccCCc---------cHHHHHHHHHHHHHHcCCEecchhccCCCHH
Confidence 88763 345554 4311 1334444445312 1268999999999999999999999999999
Q ss_pred HHHhhCCh-hHHHHHHHhCCCCCCCccchhh
Q 008384 507 NFWRMFDA-DLYEKCRKKYKAVGTFMSVYYK 536 (567)
Q Consensus 507 ef~~~y~~-~~y~~lr~kydp~~~f~~~y~k 536 (567)
+|+++||+ +.|.+||+++||++.|.|-|-+
T Consensus 446 ~~~~~YP~~~~F~~lr~~~DP~g~F~n~~~r 476 (481)
T 4feh_A 446 TFHAMYPRVDEWISVRRKVDPLRVFASDMAR 476 (481)
T ss_dssp HHHHHCTTHHHHHHHHHHHCTTCCBCCHHHH
T ss_pred HHHHhCcCHHHHHHHHHhhCCccccCCHHHH
Confidence 99999998 8999999999999999999876
No 2
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=3.5e-41 Score=362.31 Aligned_cols=401 Identities=15% Similarity=0.160 Sum_probs=274.8
Q ss_pred hhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCcccc--CCeEEEEcCCCC
Q 008384 41 FLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKR--ARHFEVDLSAFR 115 (567)
Q Consensus 41 ~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~--~~givIdls~l~ 115 (567)
+.+.++| |+..+.+.|. .|.+.++|+++++.+ . ...++|+||++. +.+. .+|++|||++||
T Consensus 6 ~~~~~~~-w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~--~v~~~G~G~s~~-------~~~~~~~~g~vi~l~~l~ 71 (422)
T 2vfr_A 6 SDITVTN-WAGNITYTAKELLRPHSLDALRALVADS----A--RVRVLGSGHSFN-------EIAEPGDGGVLLSLAGLP 71 (422)
T ss_dssp CCCCCBC-SSSSCBCSCSSCBCCSSHHHHHHHHHHC----S--SEEECSSCCCCS-------STTCCCTTCEEECSTTSC
T ss_pred CCceeec-CCCCccCCCCEEEeCCCHHHHHHHHHhC----C--CEEEEECCCCCC-------CCccCCCCcEEEEhhhCC
Confidence 3345678 8777767776 455555555555544 2 344556665432 2222 589999999999
Q ss_pred CceEEeCCCcEEEEcCCCcHHHHHHHHccCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeE
Q 008384 116 NILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQV 195 (567)
Q Consensus 116 ~il~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~v 195 (567)
+|+++|+++++|+||||+++.+|+++|.++|+.+|..++++.+||||++++|+.| .+.+||.++|+|+++++|++||++
T Consensus 72 ~i~~~d~~~~~v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G-~~~~~G~~~d~v~~~~vv~~~G~~ 150 (422)
T 2vfr_A 72 SVVDVDTAARTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHG-SGVGNGSLASVVREVELVTADGST 150 (422)
T ss_dssp CCEEEETTTTEEEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCC-CCTTCCCGGGGEEEEEEECTTSCE
T ss_pred CcEEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCC-CCcccCcHHHheEEEEEEeCCCCE
Confidence 9999999999999999999999999999999999877789999999999765555 568999999999999999999999
Q ss_pred EEEcCCCCChhhhhhccccCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHH-HHHHHHhCCCCCCCcCCCCccceE
Q 008384 196 VRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIA-QAYADSFAPRDGDQDNQAKVPDFV 274 (567)
Q Consensus 196 v~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v 274 (567)
++++++ +++ ||+++||+|++||||+++|++.|.++.....+. +.++++++ +.+.++.. .+..+
T Consensus 151 ~~~~~~-~~~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~ 214 (422)
T 2vfr_A 151 VVIARG-DER--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT--ELPLAGLDPATFETVMA-----------AAYSV 214 (422)
T ss_dssp EEEETT-STT--GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE--EECSTTCCHHHHHHHHT-----------SSSEE
T ss_pred EEeCCC-CCC--cceEEecCCCCEEEEEEEEEEEecCceEEEEEe--cCCHHHHHHHHHHHHHh-----------cCCcE
Confidence 999986 665 899999999999999999999999986554442 34567777 77766631 24678
Q ss_pred EEEEecCC-c--eEEEEeecCChHHhhhcccccccccccccchhhHHHhhhhhcCcccccccccccccccCcceeecccc
Q 008384 275 EGMIYTST-E--AVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKL 351 (567)
Q Consensus 275 d~~~~~~~-~--~v~~~g~~~~~~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~~fw~~~~ 351 (567)
+.++ ... . +++..+...+.+.. . . .| .+ .+ ......+|..... ..++
T Consensus 215 e~~~-~~~~~~~~~~~~~~~~~~~~~----~-----~----~~----~~-~~--~~~~~~~p~~~~~-----~~~~---- 264 (422)
T 2vfr_A 215 SLFT-DWRAPGFRQVWLKRRTDRPLD----G-----F----PY----AA-PA--AEKMHPVPGMPAV-----NCTE---- 264 (422)
T ss_dssp EEEE-CSSSSSEEEEEEEEETTSCCC----C-----C----TT----SE-EC--SSCCCSSTTSCGG-----GBCC----
T ss_pred EEEe-cCCCceeEEEEecCcCCCCCC----C-----c----hH----HH-HH--HhhcccCcccChh-----hhcc----
Confidence 8877 543 3 33444433211100 0 0 11 00 00 0000001110000 0111
Q ss_pred ccccC-chhhhhhhhccCCChhhhhhHhhhchhhhcccCCceEEEEEeeccccHHHHHHHHHHHhhc-CCceeeeeEEec
Q 008384 352 ILPFG-DQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHREVEV-YPLWLCPHRLYK 429 (567)
Q Consensus 352 ~~p~~-~~~~~R~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~viqDv~VP~~~l~e~l~~l~~~~~~-~P~wlcp~~~~~ 429 (567)
+.+ ...+.+.+.. ...+.+ -....++.+|++||+++++++|+.+++++++ ++.+ ||+.+|+
T Consensus 265 --~~~~~~~~~~~~~~-------------~~~~~~-p~~~~~~~~e~avP~e~~~~~l~~l~~~~~~~~~~~-~~v~~r~ 327 (422)
T 2vfr_A 265 --QFGVPGPWHERLPH-------------FRAEFT-PSSGAELQSEYLMPREHALAALHAMDAIRETLAPVL-QTCEIRT 327 (422)
T ss_dssp --CTTCCEEGGGTSSS-------------BCTTCC-CSCCSCEEEEEEEEGGGHHHHHHHHHHTHHHHGGGE-EEEEEEE
T ss_pred --cCCccccHHHhccc-------------cccccc-CCcccEEEEEEEEEHHHHHHHHHHHHHHHHhCCCce-eeEEEEe
Confidence 110 0111111110 000000 0003467779999999999999999999886 7765 8999887
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCCceeEEEEeecCCCCCCCCCccchhHHHHHHHHHHHHcCCcccccccccCCHHHHH
Q 008384 430 LPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEKNFW 509 (567)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~~~~~~~~~~~~~~~~r~lE~~v~~~gG~k~Lya~~y~t~~ef~ 509 (567)
.. .++++. |+..+ .+.+ ++.+|..++ .....++++++|++|.++||+.+++++.+++.++|+
T Consensus 328 ~~------~~~~~L-s~~~~---r~~~--~l~~~~~~~------~~~~~~~~~~~~~lv~~~gG~~~wgk~~~~~~~~~~ 389 (422)
T 2vfr_A 328 VA------ADAQWL-SPAYG---RDTV--AAHFTWVED------TAAVLPVVRRLEEALVPFAARPHWGKVFTVPAGELR 389 (422)
T ss_dssp EC------CBCSTT-CTTBT---SCEE--EEEEEECSC------HHHHHHHHHHHHHHHGGGTCEECTTSCCCCCHHHHH
T ss_pred ec------CCcccc-CCCCC---CCeE--EEEEecCCC------chhHHHHHHHHHHHHHHcCCcccccccCCCCHHHHH
Confidence 62 334443 43111 1233 777775221 111248999999999999999999999999999999
Q ss_pred hhCCh-hHHHHHHHhCCCCCCCccchhhh
Q 008384 510 RMFDA-DLYEKCRKKYKAVGTFMSVYYKS 537 (567)
Q Consensus 510 ~~y~~-~~y~~lr~kydp~~~f~~~y~k~ 537 (567)
++|++ +.|.++|++|||++.|.|.|.|-
T Consensus 390 ~~Yp~~~~f~~vk~~~DP~g~f~n~~~~r 418 (422)
T 2vfr_A 390 ALYPRLADFGALAGALDPAGKFTNAFVRG 418 (422)
T ss_dssp TTCTTHHHHHHHHHHHCTTCTTCCHHHHH
T ss_pred HHCcCHHHHHHHHHHhCCCCccCCHHHHH
Confidence 99997 79999999999999999999873
No 3
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=2.4e-36 Score=329.40 Aligned_cols=436 Identities=13% Similarity=0.099 Sum_probs=276.2
Q ss_pred hcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcC-CCCCceE
Q 008384 44 YLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLS-AFRNILD 119 (567)
Q Consensus 44 ~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls-~l~~il~ 119 (567)
.++| |+....+.|. .|.+.++|+++++++++++. ...++|+||++..+....+. ...+|++|||+ +||+| +
T Consensus 18 ~~~n-Ws~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~--pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~ 92 (540)
T 3js8_A 18 SFKN-WAGDIKVDDVWTCAPRSADEVVKVANWAKDNGY--KVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-S 92 (540)
T ss_dssp EEEC-TTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTC--EEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-E
T ss_pred eeec-cccccCCCccEEEEcCCHHHHHHHHHHHHHcCC--eEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-E
Confidence 3678 8777666665 89999999999999999875 45667888876422221111 24589999996 69999 9
Q ss_pred EeCC--CcEEEEcCCCcHHHHHHHHccCCceeeecCCCCccchhhhhcccCCCCC----------CcccCcccceEEEEE
Q 008384 120 IDKD--RMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGS----------SHIYGLFSDTVVAYE 187 (567)
Q Consensus 120 id~~--~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~----------s~~~G~~~d~V~~~e 187 (567)
+|++ +++|+||||+++.+|+++|.++|+.++..|+++.+||||++++|+.|.. +.+||.++|+|++++
T Consensus 93 vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~le 172 (540)
T 3js8_A 93 IDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLT 172 (540)
T ss_dssp EECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEE
T ss_pred ECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEE
Confidence 9985 5899999999999999999999999998888888999999975544443 579999999999999
Q ss_pred EEEecCe-----EEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHH-------HHHH
Q 008384 188 IVLADGQ-----VVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQ-------AYAD 255 (567)
Q Consensus 188 vV~adG~-----vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~-------~~~~ 255 (567)
||++||+ ++++++ +++||+ ++++|.|+ ||||+++||++|.+......+.. .+++++++ .+.+
T Consensus 173 vV~adG~~~~~~i~~~s~--~~~DL~-a~r~G~G~-gIVTevtlrl~P~~~l~~~~~~~--~~~~e~l~~~~~~~~~~~~ 246 (540)
T 3js8_A 173 AVVYDKASGAYALRKFAR--NDPQIA-PLLAHVGR-SLIVEATLQAAPNQRLRCQSWFN--IPYGEMFAAAGSGGRTFAS 246 (540)
T ss_dssp EEEEETTTTEEEEEEEET--TSGGGH-HHHTCTTS-SCEEEEEEEEEECCEEEEEEECC--SCHHHHTCCSSCCSSCHHH
T ss_pred EEcCCCCCceeeEEEeCC--CChhHH-HHHhcCCC-eEEEEEEEEEEECCceEEEEEec--CCHHHHHhhcccccccHHH
Confidence 9999998 888885 589984 55666687 69999999999999866555432 35777664 3444
Q ss_pred HhCCCCCCCcCCCCccceEEEEEecCCceEEEEeec-CChHHhhhcccccccccccccchhhHHHhhhhhcCcccccccc
Q 008384 256 SFAPRDGDQDNQAKVPDFVEGMIYTSTEAVFMTGRY-ASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPT 334 (567)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~vd~~~~~~~~~v~~~g~~-~~~~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~ 334 (567)
++. ..++++++||+..+.+.+.-.. +...+... + .....+.-+|....... ..
T Consensus 247 ~~~-----------~~~~~e~~WfP~t~~~~~k~~~~~~~~p~~~---~--~~~~p~~~~~~d~l~~~-----~~----- 300 (540)
T 3js8_A 247 YLD-----------SAGRVEAIWFPFTSNPWLKVWTVTPNKPLFS---R--QTDKPFNYPFSDNLPDE-----VT----- 300 (540)
T ss_dssp HHH-----------HTSEEEEEECTTCSSCEEEEEEECSSCCTTC---E--ECSSSCCCHHHHSCCHH-----HH-----
T ss_pred HHh-----------ccCeEEEEEECCCCceEEEEccCCCCCCCcc---c--cccCCcccccccccchH-----HH-----
Confidence 431 2589999999876554332222 21111100 0 00000011111000000 00
Q ss_pred cccccccCcceeeccccccccCchhhhhhhhccC---CChhh--hh--hHhhhchhhhcccCCceEEEEEee--ccccHH
Q 008384 335 REYYHRHTRSLYWEGKLILPFGDQFWFRFLFGWM---MPPKV--SL--LKATQGEAIRNYYHQNHVIQDMLV--PLYKVG 405 (567)
Q Consensus 335 ~dy~~r~~r~~fw~~~~~~p~~~~~~~R~l~~~~---~~~~~--~~--~~~~~~~~i~~~~~~~~viqDv~V--P~~~l~ 405 (567)
+.+-+-.-..++. +.|.-++..++....-+ ....+ |. ++.+..+.- -++...+++| |.++++
T Consensus 301 -~~~~~~~~~~~p~---~~p~~~~~~~~~~~~~~~~~~~~d~~g~s~~~~~~~~~~~-----~r~~~~eyav~~p~~~~~ 371 (540)
T 3js8_A 301 -DLANKILSLGDGK---LTPAFGKAQFAAASAGLVATASWDLWGWSKNLLLYVKPTT-----LRVTANGYAVLTRRENVQ 371 (540)
T ss_dssp -HHHHHHHTSCCGG---GHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCCTTS-----CCCEEBCEEEEECGGGHH
T ss_pred -HHHHHHhhcCCcc---cchhHHhHHHHhhhccccccccccccccccceEEEecCcc-----ceeEeeEEeecCcHHHHH
Confidence 0000000000000 00100000000000000 00000 01 111111111 1234569999 999999
Q ss_pred HHHHHHHHHhh----------cCCceeeeeEEecCCC-CccC-----CCCCCCCCCcCCCCCCC----CceeEEEEeecC
Q 008384 406 DALEWQHREVE----------VYPLWLCPHRLYKLPY-KTMV-----YPEPGFEHHRRQGDTSY----AQMYTDVGVYYA 465 (567)
Q Consensus 406 e~l~~l~~~~~----------~~P~wlcp~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~----~~~~~n~g~~~~ 465 (567)
++|+++.++++ .+|+ .+|+++|.++. ..|+ .+.| .||+..+..+. ..+|||+-.|.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~v-~~pvEvR~~~~D~~~~~~~~~~~~p--~LS~~~~r~~~p~~d~~~~i~~~~~~- 447 (540)
T 3js8_A 372 RVLNEFVTFYQARVQAYQQQGRYPM-NGPVEIRVTGLDDPSEAALSGGVAP--ALSAIRPRPDHPEWNVAVWLDILTLP- 447 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCC-CSCEEEEEECCCCGGGSSSTTCCCC--TTCTTCCCTTCTTCCEEEEEEEEECT-
T ss_pred HHHHHHHHHHHhhhhhhhhccCccc-ccceEEEEecCCchhhccccccCCc--ccCccCCCCCCCCcceEEEEEeeecC-
Confidence 99999998765 3566 58999998742 2221 1111 13432221111 27899998885
Q ss_pred CCCCCCCCccchhHHHHHHHHHHHH-cCC-----ccc-----cccc--ccCCHHHHHhh----C-------Ch-hHHHHH
Q 008384 466 PGPILRGEVFDGAEAVRKMEQWLIE-NGG-----FQP-----QYAV--SELSEKNFWRM----F-------DA-DLYEKC 520 (567)
Q Consensus 466 ~~~~~~~~~~~~~~~~r~lE~~v~~-~gG-----~k~-----Lya~--~y~t~~ef~~~----y-------~~-~~y~~l 520 (567)
+. .. ..++.|++|+++++ +|| ++. -|.. ++.+.++|.++ | ++ +.|.++
T Consensus 448 -~~-----p~-~~~~~~~~E~~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~ 520 (540)
T 3js8_A 448 -GT-----PY-ANQFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDAAKAA 520 (540)
T ss_dssp -TC-----TT-HHHHHHHHHHHHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHHHHHH
T ss_pred -CC-----cc-HHHHHHHHHHHHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHHHHHH
Confidence 21 11 12699999999999 999 654 4444 88899999999 9 76 799999
Q ss_pred HHhCCCCCCCccchhh
Q 008384 521 RKKYKAVGTFMSVYYK 536 (567)
Q Consensus 521 r~kydp~~~f~~~y~k 536 (567)
|++|||++.|.|-|-+
T Consensus 521 ~~~~DP~~~F~n~~l~ 536 (540)
T 3js8_A 521 LAAYDPYRLFSSPLLD 536 (540)
T ss_dssp HHHHCTTCCSCCHHHH
T ss_pred HHhcCCCcccCCHHHH
Confidence 9999999999998754
No 4
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=7e-35 Score=323.23 Aligned_cols=455 Identities=12% Similarity=0.056 Sum_probs=282.9
Q ss_pred EecC-CCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCe
Q 008384 31 VVLP-ISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARH 106 (567)
Q Consensus 31 ~~lp-~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g 106 (567)
+++| ++..|... ++| |+....+.|. .|.+.++|+++++++++.+. ...++|+||++..+.... +....+|
T Consensus 12 ~~~p~~~~~y~~~--~~~-w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~--~v~~~G~G~s~~~~~l~~-~~~~~~g 85 (561)
T 2i0k_A 12 PNFPNDIALFQQA--YQN-WSKEIMLDATWVCSPKTPQDVVRLANWAHEHDY--KIRPRGAMAGWTPLTVEK-GANVEKV 85 (561)
T ss_dssp TTCCTTSCCEEEE--EEC-TTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTC--EEEEECCCCCCCTTSSCT-TCCCTTE
T ss_pred eecCCCCHhHHHH--Hhh-hhhccCCCCCEEEecCCHHHHHHHHHHHHHCCC--cEEEECCCCCcccccccC-CCcCCCe
Confidence 4557 89999874 577 7665555554 89999999999999998774 456678888764211111 1112378
Q ss_pred EEEEc-CCCCCceEEeC--CCcEEEEcCCCcHHHHHHHHccCCceeeecCCCCccchhhhhcccCCCCC----------C
Q 008384 107 FEVDL-SAFRNILDIDK--DRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGS----------S 173 (567)
Q Consensus 107 ivIdl-s~l~~il~id~--~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~----------s 173 (567)
++||| ++||+| ++|+ ++++|+||||+++.+|+++|.++|+.+|+.|+.+.+||||+++.++.|.. +
T Consensus 86 vvIdl~~~l~~i-~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~ 164 (561)
T 2i0k_A 86 ILADTMTHLNGI-TVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPG 164 (561)
T ss_dssp EEEECTTTSCCE-EEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTT
T ss_pred EEEechhhCCce-EecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccccc
Confidence 99999 899998 9998 78999999999999999999999999999999999999999965444433 7
Q ss_pred cccCcccceEEEEEEEEecCe---EEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHH
Q 008384 174 HIYGLFSDTVVAYEIVLADGQ---VVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIA 250 (567)
Q Consensus 174 ~~~G~~~d~V~~~evV~adG~---vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~ 250 (567)
++||.++|+|++++||++||+ ++++++ +++||+|+++| .|. ||||+++|++.|.++.....+.. -++++++
T Consensus 165 ~~~G~~~d~V~~~evV~~dG~~~~~~~~~~--~~~dl~~a~~g-~G~-giIt~~tl~l~p~~~~~~~~~~~--~~~~~~l 238 (561)
T 2i0k_A 165 HTYGSLSNLVTELTAVVWNGTTYALETYQR--NDPRITPLLTN-LGR-CFLTSVTMQAGPNFRQRCQSYTD--IPWRELF 238 (561)
T ss_dssp CCSSCGGGGEEEEEEEEECSSSEEEEEEET--TSGGGHHHHSC-TTS-SCEEEEEEECEECCEEEEEEECC--SCHHHHT
T ss_pred cccccHhheEEEEEEEeCCCCEEEeeeccC--CCccHHHHHhc-CCC-EEEEEEEEEEEECCceEEEEEEc--cCHHHHH
Confidence 789999999999999999999 888886 47899998874 456 99999999999999866655542 2466666
Q ss_pred HH-------HHHHhCCCCCCCcCCCCccceEEEEEecCCceEEE-EeecCChH-Hhh-------hcc----ccccc--cc
Q 008384 251 QA-------YADSFAPRDGDQDNQAKVPDFVEGMIYTSTEAVFM-TGRYASKE-EAK-------KKG----NVINS--VG 308 (567)
Q Consensus 251 ~~-------~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~v~~-~g~~~~~~-~~~-------~~~----~~~~~--~~ 308 (567)
+. +.+.. ...++++.++++..+.+++ +-...+.. +.. ... .+... ..
T Consensus 239 ~~~~~~~~~~~~~~-----------~~~~~~e~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 307 (561)
T 2i0k_A 239 APKGADGRTFEKFV-----------AESGGAEAIWYPFTEKPWMKVWTVSPTKPDSSNEVGSLGSAGSLVGKPPQAREVS 307 (561)
T ss_dssp CCTTCSSSCHHHHH-----------HHHSEEEEEECTTCSCCEEEEEEEC--------------------CCCTTSEECS
T ss_pred HHHhcccccHHHHH-----------hcCCceEEEEccCCCeEEEEEEeCCCCCccccccccccccccccccCCccccccc
Confidence 54 32221 1146888888876543332 21111110 000 000 00000 00
Q ss_pred ccccchhhHHHhhhhhcCcccccccccccccccCcceeeccccccccCchhhhhhhhc---cCCChh--hhhhHhhhchh
Q 008384 309 WWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLILPFGDQFWFRFLFG---WMMPPK--VSLLKATQGEA 383 (567)
Q Consensus 309 ~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~~fw~~~~~~p~~~~~~~R~l~~---~~~~~~--~~~~~~~~~~~ 383 (567)
.+....+....... +.+.+.+..+ ... .++|.-+...++.... .+.+.. -+.++.+....
T Consensus 308 ~p~~~~~~~~~~~~-----------~~~~l~~~~~-~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 372 (561)
T 2i0k_A 308 GPYNYIFSDNLPEP-----------ITDMIGAINA-GNP---GIAPLFGPAMYEITKLGLAATNANDIWGWSKDVQFYIK 372 (561)
T ss_dssp SSCCCHHHHSCCHH-----------HHHHHHHHHT-TCG---GGHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCC
T ss_pred ccccchhhhhhhHH-----------HHHHHHHHhc-cCc---ccchHHHHHHHHhhccccccccCcceEeechHhheeec
Confidence 00000000000000 0000000000 000 0000000000000000 000000 01222211100
Q ss_pred hhcccCCceEEEEEee--ccccHHHHHHHHHHHhh----------cCCceeeeeEEecCC-CCccCCCCCCCC---CC--
Q 008384 384 IRNYYHQNHVIQDMLV--PLYKVGDALEWQHREVE----------VYPLWLCPHRLYKLP-YKTMVYPEPGFE---HH-- 445 (567)
Q Consensus 384 i~~~~~~~~viqDv~V--P~~~l~e~l~~l~~~~~----------~~P~wlcp~~~~~~~-~~~~~~~~~~~~---~~-- 445 (567)
- ....+...+++| |.++..++|+.+.++++ .+|. ..|+.+|..+ ...+|.+-++.. +|
T Consensus 373 ~---~~~~f~~~e~av~~P~~~~~~~l~~l~~~i~~~~~~~~~~~~~~~-~~pve~R~~~~d~~~L~~~~~~~~~~lS~~ 448 (561)
T 2i0k_A 373 A---TTLRLTEGGGAVVTSRANIATVINDFTEWFHERIEFYRAKGEFPL-NGPVEIRCCGLDQAADVKVPSVGPPTISAT 448 (561)
T ss_dssp T---TSCCCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHHHTTCCCC-CSCEEEEEEECCCGGGCCSCCSCSCSSCTT
T ss_pred C---CCceEEEEEEEEcCcHHHHHHHHHHHHHHHHhchhhhhhcCCcee-eccEEEEEecCchhhhccccccCCcccccc
Confidence 0 012255679999 99999999999998874 2444 4799999874 233442200000 12
Q ss_pred -cCCCCCCCC-ceeEEEEeecCCCCCCCCCccchhHHHHHHHHHHHH-cCC-----cccccccccCCHH------HHH--
Q 008384 446 -RRQGDTSYA-QMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIE-NGG-----FQPQYAVSELSEK------NFW-- 509 (567)
Q Consensus 446 -~~~~~~~~~-~~~~n~g~~~~~~~~~~~~~~~~~~~~r~lE~~v~~-~gG-----~k~Lya~~y~t~~------ef~-- 509 (567)
|.+|..+-+ .++|||-.|- +.+ .. .++.+++|+++.+ +|| +.++-++..++.+ +|.
T Consensus 449 ~p~~g~~~~~~t~~id~~~y~-~~~------~~-~~~~~~~e~i~~~~~gG~~~~~RphWaK~~~~~~~~~~~~~~~~~~ 520 (561)
T 2i0k_A 449 RPRPDHPDWDVAIWLNVLGVP-GTP------GM-FEFYREMEQWMRSHYNNDDATFRPEWSKGWAFGPDPYTDNDIVTNK 520 (561)
T ss_dssp CCCTTCTTCCEEEEEEEEECT-TCT------TH-HHHHHHHHHHHHHHSBSSSEEEECCTTSCCSCSSSTTCCHHHHHTH
T ss_pred cCCCCCCCCCeEEEEEEEecC-CCC------cH-HHHHHHHHHHHHHhcCCCcCCCCCcccccCCccccccccHHHHHHH
Confidence 333321124 7899998874 221 11 2689999999999 999 9999999977776 999
Q ss_pred --hhC-------Ch-hHHHHHHHhCCCCCCCccchhh
Q 008384 510 --RMF-------DA-DLYEKCRKKYKAVGTFMSVYYK 536 (567)
Q Consensus 510 --~~y-------~~-~~y~~lr~kydp~~~f~~~y~k 536 (567)
+.| |+ +.|.++|+++||++.|.|-|-+
T Consensus 521 y~~~Yg~~~~~~p~~~~f~~~r~~~DP~g~F~n~~~~ 557 (561)
T 2i0k_A 521 MRATYIEGVPTTENWDTARARYNQIDPHRVFTNGFMD 557 (561)
T ss_dssp HHHHTTTTSCTTSSHHHHHHHHHHHCTTCCSCCHHHH
T ss_pred HHhhhccccCCCCCHHHHHHHHHhcCCCCccCCHHHH
Confidence 666 76 7999999999999999998744
No 5
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=8.1e-33 Score=304.49 Aligned_cols=435 Identities=14% Similarity=0.149 Sum_probs=262.6
Q ss_pred cccccccccccccC---CCCCHHHHHHHHHHHHh-cCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEE
Q 008384 45 LGDVKSDMKSYKKR---QKEHDENVKKVVKRLKE-RNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDI 120 (567)
Q Consensus 45 ~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~i 120 (567)
.++ |...+...|. .|.+.++|+++++++++ ++. ...++|+||++. |.+. ..+|++|||++||+| ++
T Consensus 51 ~~d-~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~--~v~~~GgGts~~--g~~~----~~~gvvidl~~m~~i-~i 120 (524)
T 2exr_A 51 GRD-FGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKL--TVAARGNGHSIN--GQAM----AEGGLVVDMSTTAEN-HF 120 (524)
T ss_dssp TCC-TTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSC--CEEEESSSCCSS--STTC----CTTSEEEEGGGGTTS-CE
T ss_pred hcc-ccccccCCCCEEEecCCHHHHHHHHHHHHhhcCc--eEEEECCCcCCC--Cccc----CCCEEEEECcCCCCc-EE
Confidence 345 5443434554 89999999999999995 664 345566666543 2222 127999999999999 88
Q ss_pred eC-----CC--cEEEEcCCCcHHHHHHH-HccCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEEEEEEec
Q 008384 121 DK-----DR--MIAKVEPLVNMGQISRA-TCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLAD 192 (567)
Q Consensus 121 d~-----~~--~~v~VeaGv~~~~L~~~-l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~ad 192 (567)
|. ++ .+|+||||+++.++.+. +.++|+.++..++++.+||||+++++|.|+.+.+||.++|+|++++||++|
T Consensus 121 ~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~d 200 (524)
T 2exr_A 121 EVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGN 200 (524)
T ss_dssp EEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETT
T ss_pred eecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecC
Confidence 87 55 79999999999998555 559999965545678899999998888898999999999999999999999
Q ss_pred CeEEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHhCCCCCCCcCCCCccc
Q 008384 193 GQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPD 272 (567)
Q Consensus 193 G~vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (567)
|++++++.. +++||||+++||+|+|||||+++|++.|.|+....... .|.+++++.++...+..... . ...+
T Consensus 201 G~v~~~~~~-~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~-~f~~~~~~~~~~~~l~~~~~-----~-~~~e 272 (524)
T 2exr_A 201 GDVVTCSEI-ENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRV-VYTEFDEFTQDAEWLVSQKN-----E-SSFD 272 (524)
T ss_dssp SCEEEEESS-SSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEE-EESCHHHHHHHHHHHHTSCT-----T-SSCS
T ss_pred CeEEEECCC-CChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEE-EeCCHHHHHHHHHHHHHcCC-----c-chhH
Confidence 999999986 89999999999999999999999999999985443222 35678888888877753211 1 1236
Q ss_pred eEEEEEecCCceEE--EEeecCChHHhhhcccccccccc-cccchhhHHH-----hhhhhcCcccccccccccccccCcc
Q 008384 273 FVEGMIYTSTEAVF--MTGRYASKEEAKKKGNVINSVGW-WFKPWFYQHA-----ATALKRGEFTEYIPTREYYHRHTRS 344 (567)
Q Consensus 273 ~vd~~~~~~~~~v~--~~g~~~~~~~~~~~~~~~~~~~~-~~~p~fy~~~-----~~~~~~~~~~e~~p~~dy~~r~~r~ 344 (567)
++|...+.....++ ....+...... .....+.. ....++.... +...........-.+.+.+-.+. +
T Consensus 273 ~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~llve~~~~~~~g~~~~~v~~~~~~~~~~l~~~~-~ 347 (524)
T 2exr_A 273 YVEGFVFVNGADPVNGWPTVPLHPDHE----FDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGRLRFNE-G 347 (524)
T ss_dssp EEEEEEEESSCCTTTSGGGSCSSTTSC----CCGGGSCTTCCSEEEEEEEEEEECTTSCHHHHHHHHHHHHTTCCCCT-T
T ss_pred hhchhhhhcchhhhhhhhhcccccccc----cchhcCCcccccEEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHhCC-C
Confidence 67765433211100 00000000000 00000000 0000000000 00000000000000000110000 0
Q ss_pred eeeccccccccCchhhhhhhhccCCChhhhhhHhhhchhhhcccCCceEEEEEeeccccHHHHHHHHHHHh----hcCCc
Q 008384 345 LYWEGKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHREV----EVYPL 420 (567)
Q Consensus 345 ~fw~~~~~~p~~~~~~~R~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~viqDv~VP~~~l~e~l~~l~~~~----~~~P~ 420 (567)
....... ...... ... ....|..|.....++. .. . .|++||+++++++++.+.+.. ..||+
T Consensus 348 ~~~~~~~-------~~~~~~-~~~-~~~~W~~R~~~~~a~~----~~-~-~Dv~VP~s~l~~~~~~v~~~~~gdgn~h~~ 412 (524)
T 2exr_A 348 LRFEVDL-------PYVDFL-LRV-KRSEEIAKENGTWETP----HP-W-LNLFVSKRDIGDFNRTVFKELVKNGVNGPM 412 (524)
T ss_dssp CEEEEEE-------EHHHHH-TTT-HHHHHHHHHTTCSSSC----CC-C-EEEEEEHHHHHHHHHHCCCCCTTTCCSSCE
T ss_pred eEeeccc-------chhhhh-hhh-hhHHHHhhhhcccccC----CC-e-eEEEECHHHHHHHHHHHHHHHhCCCCcceE
Confidence 0000000 000000 000 0111444444433332 11 2 399999999999999886542 34899
Q ss_pred eeeeeEEecCCCCccCCCCCCCCCCcCCCCCCCCceeEEEEeecCCCCCCCC-Cccc-hhHHHHHHHHHHHHcCCccccc
Q 008384 421 WLCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRG-EVFD-GAEAVRKMEQWLIENGGFQPQY 498 (567)
Q Consensus 421 wlcp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~~~~~~~-~~~~-~~~~~r~lE~~v~~~gG~k~Ly 498 (567)
++||+.... +. .....-...| .++|+.++++.. +..... .... -.+.+++|.+..+..|+.+.-|
T Consensus 413 i~~~~~~~~-----~~---~r~~~~~~~g----~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~y 479 (524)
T 2exr_A 413 LVYPLLRSR-----WD---DRTSVVIPEE----GEIFYIVALLRF-VPPCAKVSSVEKMVAQNQEIVHWCVKNGIDYKLY 479 (524)
T ss_dssp EEEEEEGGG-----SC---TTSSCCCCSS----CSEEEEEEECCC-CCTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEES
T ss_pred EEEeCCchH-----HH---hHHHhhCCCC----ccEEEEEEEecc-CCCcccchHHHHHHHHHHHHHHHHHHcCCccEEe
Confidence 999975321 11 0011000112 257878888652 111000 0111 1357889999999999998888
Q ss_pred ccccCCHHHHHhhCCh--hHHHHHHHhCCCCCCC
Q 008384 499 AVSELSEKNFWRMFDA--DLYEKCRKKYKAVGTF 530 (567)
Q Consensus 499 a~~y~t~~ef~~~y~~--~~y~~lr~kydp~~~f 530 (567)
-.+|.++++|.+.|+. ..+.++|++|||++.|
T Consensus 480 l~~~~~~~~w~~~~G~~~~~m~~iK~~~DP~~iL 513 (524)
T 2exr_A 480 LPHYKSQEEWIRHFGNRWSRFVDRKAMFDPMAIL 513 (524)
T ss_dssp SCCCCSHHHHHHHHGGGHHHHHHHHHHHCTTCCB
T ss_pred ecCCCCHHHHHHHhhhHHHHHHHHHhhcCchhhc
Confidence 8888899999887764 5899999999999755
No 6
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.1e-31 Score=291.39 Aligned_cols=213 Identities=18% Similarity=0.201 Sum_probs=177.5
Q ss_pred EecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeE
Q 008384 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (567)
Q Consensus 31 ~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (567)
+++|.+..|+... ++ |+......|. .|.+.++|+++++++++++. ...++|+||++. |.+. ..+|+
T Consensus 16 v~~p~~~~y~~~~--~~-~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~v~ggGh~~~--~~~~----~~~gv 84 (459)
T 2bvf_A 16 VIYPDDSGFDAIA--NI-WDGRHLQRPSLIARCLSAGDVAKSVRYACDNGL--EISVRSGGHNPN--GYAT----NDGGI 84 (459)
T ss_dssp EECTTSTTHHHHH--CC-SCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTC--CEEEESSCCCTT--CTTC----CSSSE
T ss_pred EECCCCccHHHHH--HH-hhhhccCCCCEEEecCCHHHHHHHHHHHHHcCC--cEEEEcCCcCCC--Cccc----cCCeE
Confidence 6789999999753 34 6554445555 79999999999999999885 455677777653 2221 34799
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEEE
Q 008384 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYE 187 (567)
Q Consensus 108 vIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~e 187 (567)
+|||++||+| ++|+++.+|+||||+++.+|+++|.++|+.+|+ +.++.++|||++++||+|+++++||.++|+|+++|
T Consensus 85 vi~l~~l~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSI-HIDTAGSRARIGGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCE-EECCCCCEEEECCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 9999999999 999999999999999999999999999999985 77899999999999999999999999999999999
Q ss_pred EEEecCeEEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEecc-ceeEEEEecCCCCHH--HHHHHHHHHh
Q 008384 188 IVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIK-EYMKLTYKPVASNLR--EIAQAYADSF 257 (567)
Q Consensus 188 vV~adG~vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~~ 257 (567)
||++||++++++++ +|+||||+++||+|+|||||+++||++|.| ......+.....+.+ ++++++.++.
T Consensus 163 vV~~~G~i~~~~~~-~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (459)
T 2bvf_A 163 LVTATGDVIYCSDD-ERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDAL 234 (459)
T ss_dssp EECTTSCEEEEESS-SSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred EEcCCCeEEEeCCC-CChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHH
Confidence 99999999999986 899999999999999999999999999995 433323222234466 7788887764
No 7
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.2e-30 Score=288.24 Aligned_cols=202 Identities=15% Similarity=0.169 Sum_probs=164.7
Q ss_pred cccccccccccccC---CCCCHHHHHHHHHHHHh--c-CCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCc-
Q 008384 45 LGDVKSDMKSYKKR---QKEHDENVKKVVKRLKE--R-NPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNI- 117 (567)
Q Consensus 45 ~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~--~-~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~i- 117 (567)
.++ |.......|. .|.++++|+++++++++ + +. ...++|+||++. |.+. ..+|++|||++||+|
T Consensus 58 ~~d-~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~--~v~~~G~G~~~~--g~~~----~~~gvvi~l~~m~~i~ 128 (534)
T 1w1o_A 58 STD-FGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPY--TIAFRGRGHSLM--GQAF----APGGVVVNMASLGDAA 128 (534)
T ss_dssp SCC-TTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCC--CEEEESSCCCSS--STTC----CTTSEEEEGGGGGCSS
T ss_pred hcc-ccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCc--eEEEECCCCCCC--CCcC----CCCeEEEECccccccc
Confidence 344 5433334454 89999999999999997 3 43 344566666653 2222 137999999999998
Q ss_pred ----eEEeCCCcEEEEcCCCcHHHHHHHHccCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecC
Q 008384 118 ----LDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADG 193 (567)
Q Consensus 118 ----l~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG 193 (567)
+++|+++.+|+||||+++.+|++++.++|+.++..++...+||||+++++|.|+.+.+||.++|+|++++||++||
T Consensus 129 ~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG 208 (534)
T 1w1o_A 129 APPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHG 208 (534)
T ss_dssp SSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTS
T ss_pred cCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCc
Confidence 8999988999999999999999999999998776666788999999988899999999999999999999999999
Q ss_pred eEEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHh
Q 008384 194 QVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSF 257 (567)
Q Consensus 194 ~vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
++++++++ +|+||||+++||+|+|||||+++||++|.++....... .+.+++++.++...+.
T Consensus 209 ~v~~~~~~-~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 270 (534)
T 1w1o_A 209 EMVTCSKQ-LNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRF-VYTDFAAFSADQERLT 270 (534)
T ss_dssp CEEEEESS-SSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEE-EESCHHHHHHHHHHHH
T ss_pred cEEEECCC-CChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEE-EeCCHHHHHHHHHHHH
Confidence 99999986 89999999999999999999999999999985432222 2457777777665553
No 8
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-31 Score=290.02 Aligned_cols=386 Identities=16% Similarity=0.148 Sum_probs=248.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQI 138 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L 138 (567)
.|.+.++|+++++++++++. ...++|+++++. |.+. +..+|++|||++||+|+++|+++.+++||||+++.+|
T Consensus 57 ~P~s~eeV~~~v~~a~~~~~--pv~~~GgGt~~~--g~~~---~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l 129 (476)
T 3pm9_A 57 RPGSTEEVVAICKLANEARV--ALVPQGGNTGLV--GGQT---PHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRV 129 (476)
T ss_dssp CCCSHHHHHHHHHHHHHHTC--CEEEESSSCCSS--STTC---CCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred ecCCHHHHHHHHHHHHHcCC--eEEEEeCCCCCC--CCcc---CCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHH
Confidence 89999999999999999885 334455555432 2111 1246999999999999999999999999999999999
Q ss_pred HHHHccCCceeeecCC-CCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEEEEcC----CCCChhhhhhccc
Q 008384 139 SRATCPMNLSLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK----DNEYKDLFYAIPW 213 (567)
Q Consensus 139 ~~~l~~~Gl~~~~~p~-~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~~s~----~~~~~dLf~a~~g 213 (567)
+++|.++|+.+|..|+ ...+||||+++.++.|..+.+||.++|+|++++||++||++++++. ++.++||+|+++|
T Consensus 130 ~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~G 209 (476)
T 3pm9_A 130 QEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIG 209 (476)
T ss_dssp HHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTT
T ss_pred HHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhcc
Confidence 9999999999887664 6689999999766666668999999999999999999999999753 3457899999999
Q ss_pred cCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHhCCCCCCCcCCCCccceEEEEEecCC-----------
Q 008384 214 SQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIYTST----------- 282 (567)
Q Consensus 214 s~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~----------- 282 (567)
|+|+|||||+++||+.|.++.....+. .+.+++++++++.++... ....+..+|.++...-
T Consensus 210 s~GtlGIIt~~tl~l~p~p~~~~~~~~-~~~~~~~a~~~~~~~~~~-------~g~~p~a~El~d~~~~~~~~~~~~~~~ 281 (476)
T 3pm9_A 210 AEGTLGIITAATLKLFPKPRAVETAFV-GLQSPDDALKLLGIAQGE-------AAGNLTSFELIAETPLDFSVRHANNRD 281 (476)
T ss_dssp STTSSCEEEEEEEECEECCSEEEEEEE-EESCHHHHHHHHHHHHHH-------HGGGEEEEEEEEHHHHHHHHHHTTCCC
T ss_pred CCCCcEEEEEEEEEEeecCceeEEEEE-EcCCHHHHHHHHHHHHHh-------cCCCceEEEecCHHHHHHHHhccCCCC
Confidence 999999999999999999986544333 367899988888776310 0012344454432110
Q ss_pred ------ceEEEEeecCChHHhhhcccccccccccccchhhHHHhhhhhcCcccccccccccccccCcceeeccccccccC
Q 008384 283 ------EAVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLILPFG 356 (567)
Q Consensus 283 ------~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~~fw~~~~~~p~~ 356 (567)
..+++.....+.++... .+....+.....+...+ ..+ ..+
T Consensus 282 ~~~~~~~~~llve~~g~~~~~~~--------------~~~~~~~~~~~~g~~~~--------------~~~------a~~ 327 (476)
T 3pm9_A 282 PLEARYPWYVLIELSSPRDDARA--------------ALESILERGFEDGIVVD--------------AAI------ANS 327 (476)
T ss_dssp CSSSCCSEEEEEEEEESSSCHHH--------------HHHHHHHHHHHTTCCCE--------------EEE------CCS
T ss_pred CCCccCCeEEEEEEccCcHHHHH--------------HHHHHHHHHHhcCCCcc--------------eEE------eCC
Confidence 11111111000000000 00000000000000000 000 001
Q ss_pred chhhhhhhhccCCChhhhhhHhhhchhhhcccCCceEEEEEeeccccHHHHHHHHHHHhhcC-CceeeeeEEecCCCCcc
Q 008384 357 DQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHREVEVY-PLWLCPHRLYKLPYKTM 435 (567)
Q Consensus 357 ~~~~~R~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~viqDv~VP~~~l~e~l~~l~~~~~~~-P~wlcp~~~~~~~~~~~ 435 (567)
... ..++|.+|.....+.++... .+++|++||+++++++++.++++++++ |-.-+.+ ..
T Consensus 328 ~~~----------~~~lW~~R~~~~~~~~~~g~--~~~~Dv~vP~~~l~~~~~~~~~~~~~~~~~~~~~~--~g------ 387 (476)
T 3pm9_A 328 VQQ----------QQAFWKLREEISPAQKPEGG--SIKHDISVPVAAVPQFIEQANAAVVALIPGARPVP--FG------ 387 (476)
T ss_dssp HHH----------HHHHHHHHHTHHHHTGGGCC--EECCEEECCGGGHHHHHHHHHHHHHHHSTTCEEEE--EE------
T ss_pred HHH----------HHHHHHHHHHHHHHHhhcCC--ceeEEEEeeHHHHHHHHHHHHHHHHHhcCCCeEEE--EE------
Confidence 000 13456666665555554332 588999999999999999999999876 4322222 11
Q ss_pred CCCCCCCCCCcCCCCCCCCceeEEEEeecCCCCCCCCC-ccchhHHHHHHHHHHHHcCCcccccccccCCH-HHHHhhCC
Q 008384 436 VYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGE-VFDGAEAVRKMEQWLIENGGFQPQYAVSELSE-KNFWRMFD 513 (567)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~~~~~~~~-~~~~~~~~r~lE~~v~~~gG~k~Lya~~y~t~-~ef~~~y~ 513 (567)
|-..| .+.+++-.-. .. +..+ .....++.+++-+.+.++||.=.-=--.-..+ +-+...++
T Consensus 388 ---------H~gdG-----nlH~~i~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l~~~~~ 450 (476)
T 3pm9_A 388 ---------HLGDG-----NIHYNVSQPV--GA-DKAEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELAEVKD 450 (476)
T ss_dssp ---------EGGGT-----EEEEEEECCT--TC-CHHHHHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHHHHHSC
T ss_pred ---------EeCCC-----ceEEEEecCC--cC-ChHHHHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHHHHhcC
Confidence 11122 4555654321 11 0000 01124677888889999999743222222333 34477777
Q ss_pred h---hHHHHHHHhCCCCCCC
Q 008384 514 A---DLYEKCRKKYKAVGTF 530 (567)
Q Consensus 514 ~---~~y~~lr~kydp~~~f 530 (567)
. +...++|+.+||++.|
T Consensus 451 ~~~~~~m~~iK~~~DP~~il 470 (476)
T 3pm9_A 451 KTAIELMRSIKALLDPHGIM 470 (476)
T ss_dssp HHHHHHHHHHHHHHCTTSCB
T ss_pred HHHHHHHHHHHHHhCcccCC
Confidence 4 5888999999999754
No 9
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=4.4e-32 Score=306.23 Aligned_cols=204 Identities=21% Similarity=0.194 Sum_probs=169.3
Q ss_pred cccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCcc-ccCCeEEEEcCCCCCceEEeCCC
Q 008384 49 KSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDY-KRARHFEVDLSAFRNILDIDKDR 124 (567)
Q Consensus 49 ~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~givIdls~l~~il~id~~~ 124 (567)
|...+...|. .|.+.++|++|+++|++++. .++.+|+++++. |+..... ...++|+|||++||+|++||+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~i--pVvprGgGTsl~--GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~ 273 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNL--CIIPIGGGTSVS--YGLMCPADETRTIISLDTSQMNRILWVDENN 273 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTC--EEEEESSCCCSS--STTCCCTTCCSCEEEEECTTCCCEEEEETTT
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCC--eEEEECCCcCCC--CCCCCCCCCCCcEEEEECccCCCcEEEcCCC
Confidence 3333334454 89999999999999999885 455567776543 1111111 12468999999999999999999
Q ss_pred cEEEEcCCCcHHHHHHHHccCCceeeecCC-CCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEEEEcC---
Q 008384 125 MIAKVEPLVNMGQISRATCPMNLSLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK--- 200 (567)
Q Consensus 125 ~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~-~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~~s~--- 200 (567)
++++|||||++.+|+++|.++|+++|..|+ ...+||||+++.++.|..+.+||.+.|+|+++|||++||++++.++
T Consensus 274 ~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k 353 (658)
T 4bby_A 274 LTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPR 353 (658)
T ss_dssp TEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSS
T ss_pred CEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccc
Confidence 999999999999999999999999998884 6889999999888888889999999999999999999999988643
Q ss_pred CCCChhhhhhccccCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHh
Q 008384 201 DNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSF 257 (567)
Q Consensus 201 ~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
.+.++||+++++||+|||||||+++|||+|.|+....... .|.+++++++++.++.
T Consensus 354 ~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~-~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 354 MSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSV-AFPNFEQGVACLREIA 409 (658)
T ss_dssp CCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEE-EESSHHHHHHHHHHHH
T ss_pred cCCCcCHHHHhccCCCcCcceeeeeeeeccCCcccccccc-ccCCchhhhhhHHHHH
Confidence 3467999999999999999999999999999996654443 4678999998888775
No 10
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.98 E-value=1.2e-30 Score=286.21 Aligned_cols=219 Identities=18% Similarity=0.220 Sum_probs=177.0
Q ss_pred EecCCCcchhhh--hhcccc-cccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccC
Q 008384 31 VVLPISVTIYFL--IYLGDV-KSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA 104 (567)
Q Consensus 31 ~~lp~s~~~~~~--~~~~n~-~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 104 (567)
++.|.|+.|... .+.+|. |+......|. .|.++++|+++++++++++. ...++++||++. |.+.+....+
T Consensus 24 v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~--~~~~r~gGh~~~--g~s~~~~~~~ 99 (500)
T 3tsh_A 24 LYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSV--RIRVRSGGHDYE--GLSYRSLQPE 99 (500)
T ss_dssp EEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTC--EEEEESSCCCTT--CTTTCCSSSC
T ss_pred EECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCC--cEEEEcCCcCCC--CCcCCCCCcC
Confidence 567999999864 344553 6665555665 89999999999999999885 456678888775 3333323356
Q ss_pred CeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccCCceeee-cCCCCccchhhhhcccCCCCCCcccCcccceE
Q 008384 105 RHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAV-VAELDDLTVGGLINGYGIEGSSHIYGLFSDTV 183 (567)
Q Consensus 105 ~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~-~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V 183 (567)
+|++|||++||+| ++|+++++++||||+++++|+++|.++|+.+++ .+.|++++|||.+++||+|..+++||+.+|+|
T Consensus 100 ~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v 178 (500)
T 3tsh_A 100 TFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENV 178 (500)
T ss_dssp CEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGE
T ss_pred CeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhhe
Confidence 8999999999998 999999999999999999999999999965543 45799999999999999999999999999999
Q ss_pred EEEEEEEecCeEEEEcCCCCChhhhhhcccc-CCCceEEEEEEEEEEeccceeEE-EE-ecCCCCHHHHHHHHHHH
Q 008384 184 VAYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIPIKEYMKL-TY-KPVASNLREIAQAYADS 256 (567)
Q Consensus 184 ~~~evV~adG~vv~~s~~~~~~dLf~a~~gs-~G~lGiIt~~tl~l~p~~~~~~~-~~-~~~~~~~~~~~~~~~~~ 256 (567)
+++|||++||++++.+. +++||||+++|+ +|+|||||+++||++|.++.+.. .+ ........+++..++.+
T Consensus 179 ~~~~vV~a~G~i~~~~~--~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (500)
T 3tsh_A 179 IDVKLVDANGKLHDKKS--MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVV 252 (500)
T ss_dssp EEEEEECTTSCEECHHH--HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHH
T ss_pred eeEEEECCCceEEECCC--CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHh
Confidence 99999999999986543 689999999965 67999999999999999884421 11 12234566777777766
No 11
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=99.97 E-value=7.4e-30 Score=277.46 Aligned_cols=217 Identities=19% Similarity=0.243 Sum_probs=177.0
Q ss_pred EEecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCe
Q 008384 30 FVVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARH 106 (567)
Q Consensus 30 ~~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g 106 (567)
.+++|.++.|+......| ......|. .|.++++|+++++++++++. ...++|+||++...+.+. .+++
T Consensus 13 ~v~~p~~~~y~~~~~~~n---~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~--~v~v~ggGh~~~g~~~~~----~~~~ 83 (473)
T 3rja_A 13 PIDIPGTADYERDVEPFN---IRLPYIPTAIAQTQTTAHIQSAVQCAKKLNL--KVSAKSGGHSYASFGFGG----ENGH 83 (473)
T ss_dssp CBCCTTSHHHHHHTCCSB---TTSCCCCSEEEECCSHHHHHHHHHHHHHTTC--CEEEESSCCCTTCGGGTS----SSSC
T ss_pred cEECCCCCchHHHHHHhh---cccCCCCCEEEEeCCHHHHHHHHHHHHHcCC--eEEEEcCCCCCCCCcccC----CCCe
Confidence 377899999998754434 33334554 89999999999999999875 445567777654222111 2478
Q ss_pred EEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccCC-ceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEE
Q 008384 107 FEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMN-LSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVA 185 (567)
Q Consensus 107 ivIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~G-l~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~ 185 (567)
++|||++||+|.++|+++++|+||||+++.+|+++|.++| +.+| .+.++.+||||++++||+|..+++||+++|+|++
T Consensus 84 vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p-~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~ 162 (473)
T 3rja_A 84 LMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAIS-HGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVG 162 (473)
T ss_dssp EEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEE
T ss_pred EEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEec-cCCCCCcEeeeeccCCCCCcccccccchHhheee
Confidence 9999999999956999999999999999999999999999 8777 4789999999999999999999999999999999
Q ss_pred EEEEEecCeEEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEeccceeE-EEEecCCC---CHHHHHHHHHHHh
Q 008384 186 YEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMK-LTYKPVAS---NLREIAQAYADSF 257 (567)
Q Consensus 186 ~evV~adG~vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~-~~~~~~~~---~~~~~~~~~~~~~ 257 (567)
++||++||++++++++ +++||||+++||+|+|||||+++||++|.|+.+. ......+. +..+++++++++.
T Consensus 163 ~~vV~a~G~v~~~~~~-~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (473)
T 3rja_A 163 VTVVLADGRIVEASAT-ENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYA 237 (473)
T ss_dssp EEEECTTSCEEEEETT-BSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeEEEeCCC-CCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHh
Confidence 9999999999999986 8999999999999999999999999999987432 22222233 2556777777774
No 12
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=2.7e-29 Score=279.07 Aligned_cols=194 Identities=16% Similarity=0.179 Sum_probs=159.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQI 138 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L 138 (567)
.|.+.++|+++++++++++. ...++|+|+++. |........+++++|||++||+|+++|+++.+|+||||+++.+|
T Consensus 143 ~P~s~eeV~~iv~~a~~~~~--pv~~~GgGts~~--gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l 218 (584)
T 2uuu_A 143 LPHSHEEVERLVQLAHKYNV--VIIPMGGGSNIV--GAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPEL 218 (584)
T ss_dssp CCCSHHHHHHHHHHHHHHTC--EEEEESSCCCSS--CTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred eCCCHHHHHHHHHHHHHcCC--eEEEEeCCCCCC--CCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHH
Confidence 89999999999999999875 345566666543 22211111146899999999999999999999999999999999
Q ss_pred HHHHccCCceeeecCC-CCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEEE--EcCCCCChhhhhhccccC
Q 008384 139 SRATCPMNLSLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVR--ATKDNEYKDLFYAIPWSQ 215 (567)
Q Consensus 139 ~~~l~~~Gl~~~~~p~-~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~--~s~~~~~~dLf~a~~gs~ 215 (567)
+++|.++|+.+|..|+ ...+||||++++++.|..+.+||.++|+|++++||++||++++ ..+++.++||+|+++||+
T Consensus 219 ~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~Gse 298 (584)
T 2uuu_A 219 EKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSE 298 (584)
T ss_dssp HHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCT
T ss_pred HHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCC
Confidence 9999999999988885 6789999999888888888999999999999999999999886 223347899999999999
Q ss_pred CCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHh
Q 008384 216 GTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSF 257 (567)
Q Consensus 216 G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
|+|||||+++||+.|.|+....... .|.+++++++++.++.
T Consensus 299 GtlGIIT~~tlrl~p~p~~~~~~~~-~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 299 GTLGIITEAVMKVHAVPQAVEYYGF-LFPTFAHAVSALQQIR 339 (584)
T ss_dssp TSSCEEEEEEEECEECCSEEEEEEE-EESSHHHHHHHHHHHH
T ss_pred CCcEEEEEEEEEEEecccceEEEEE-EcCCHHHHHHHHHHHH
Confidence 9999999999999999985443332 3578999998888774
No 13
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.96 E-value=3e-29 Score=273.56 Aligned_cols=218 Identities=17% Similarity=0.243 Sum_probs=174.7
Q ss_pred EEEecCCCcchhhh--hhccc-ccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccc
Q 008384 29 VFVVLPISVTIYFL--IYLGD-VKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYK 102 (567)
Q Consensus 29 ~~~~lp~s~~~~~~--~~~~n-~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 102 (567)
-.+++|.++.|+.. .+++| .|.......|. .|.+.++|+++++++++++. ...++|+||++. |.+.. .
T Consensus 15 ~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~--~v~vrGgGh~~~--g~~~~--~ 88 (495)
T 3fw9_A 15 TVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSW--TIRLRSGGHSYE--GLSYT--S 88 (495)
T ss_dssp EECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSC--EEEEESSCCCTT--CTTSC--C
T ss_pred CeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCC--eEEEECCCcCCC--Ccccc--C
Confidence 34678999999986 35555 36555555665 89999999999999999875 455677777653 22211 1
Q ss_pred cCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccC--CceeeecCCCCccchhhhhcccCCCCCCcccCccc
Q 008384 103 RARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM--NLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFS 180 (567)
Q Consensus 103 ~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~--Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~ 180 (567)
..+|++|||++||+| ++|+++++|+||||+++.+|.++|.++ |+.+|. +.++++||||.+++||+|+.+++||+++
T Consensus 89 ~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~~~G~~~ 166 (495)
T 3fw9_A 89 DTPFILIDLMNLNRV-SIDLESETAWVESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSRKYGLAA 166 (495)
T ss_dssp SSCEEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGG
T ss_pred CCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCcccccCCCchh
Confidence 136899999999999 999999999999999999999999999 788874 7889999999999999999999999999
Q ss_pred ceEEEEEEEEecCeEEEEcCCCCChhhhhhccc-cCCCceEEEEEEEEEEeccceeEE-EEecCC--CCHHHHHHHHHHH
Q 008384 181 DTVVAYEIVLADGQVVRATKDNEYKDLFYAIPW-SQGTLGLLVSAEIKLIPIKEYMKL-TYKPVA--SNLREIAQAYADS 256 (567)
Q Consensus 181 d~V~~~evV~adG~vv~~s~~~~~~dLf~a~~g-s~G~lGiIt~~tl~l~p~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 256 (567)
|+|++++||++||++++ +.. +++||||+++| |+|+|||||+++||++|.|+.+.. .+...+ .+..+++..++++
T Consensus 167 D~v~~~~vV~adG~i~~-~~~-~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~ 244 (495)
T 3fw9_A 167 DNVVDAILIDANGAILD-RQA-MGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFV 244 (495)
T ss_dssp GGEEEEEEECTTCCEEC-HHH-HCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHH
T ss_pred heEEEEEEEcCCCCEEE-cCC-CChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHH
Confidence 99999999999999997 333 78999999999 789999999999999999874332 111111 2345666667665
No 14
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.96 E-value=6.6e-29 Score=271.68 Aligned_cols=218 Identities=19% Similarity=0.234 Sum_probs=173.3
Q ss_pred EEecCCCcchhhhh--hcccc-cccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCcccc
Q 008384 30 FVVLPISVTIYFLI--YLGDV-KSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKR 103 (567)
Q Consensus 30 ~~~lp~s~~~~~~~--~~~n~-~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 103 (567)
.+++|+++.|+... +++|. |+......|. .|.++++|+++++++++++. ...++|+||++. |.+.. ..
T Consensus 24 ~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~--~v~vrggGh~~~--g~~~~--~~ 97 (518)
T 3vte_A 24 LVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGL--QIRTRSGGHDAE--GMSYI--SQ 97 (518)
T ss_dssp CEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTC--EEEEESSCCCTT--CTTTC--CS
T ss_pred eEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCC--cEEEECCCcCCC--CCccC--CC
Confidence 36789999999763 34442 6554445565 89999999999999999885 455667777653 22210 12
Q ss_pred CCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccC--CceeeecCCCCccchhhhhcccCCCCCCcccCcccc
Q 008384 104 ARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM--NLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSD 181 (567)
Q Consensus 104 ~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~--Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d 181 (567)
.+|++|||++||+| ++|+++++|+||||+++.+|+++|.++ |+.++ .+.++++||||++++||+|..+++||+++|
T Consensus 98 ~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~-~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D 175 (518)
T 3vte_A 98 VPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLGEVYYWINEKNENLSFP-GGYCPTVGVGGHFSGGGYGALMRNYGLAAD 175 (518)
T ss_dssp SSEEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHHHCTTEECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGG
T ss_pred CCeEEEECCCCcee-EEeCCCCEEEEeCCccHHHHHHHHHHhCCCceec-CCCCCCeeeeeeeCCCCCccccCCCCchhh
Confidence 37999999999998 999999999999999999999999987 46665 467899999999999999999999999999
Q ss_pred eEEEEEEEEecCeEEEEcCCCCChhhhhhcccc-CCCceEEEEEEEEEEeccceeE-EEEecCC--CCHHHHHHHHHHHh
Q 008384 182 TVVAYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIPIKEYMK-LTYKPVA--SNLREIAQAYADSF 257 (567)
Q Consensus 182 ~V~~~evV~adG~vv~~s~~~~~~dLf~a~~gs-~G~lGiIt~~tl~l~p~~~~~~-~~~~~~~--~~~~~~~~~~~~~~ 257 (567)
+|++++||++||++++.. . +++|||||++|| +|+|||||+++||++|.++.+. ..+...+ .+..+++..|+++.
T Consensus 176 ~V~~~evV~adG~iv~~~-~-~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 253 (518)
T 3vte_A 176 NIIDAHLVNVDGKVLDRK-S-MGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIA 253 (518)
T ss_dssp GEEEEEEECTTCCEECHH-H-HCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHG
T ss_pred eEEEEEEEccCCeEEEee-c-cccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999999999999653 2 689999999998 8999999999999999987432 2222212 23456677777763
No 15
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.95 E-value=6.9e-28 Score=264.12 Aligned_cols=214 Identities=17% Similarity=0.143 Sum_probs=170.8
Q ss_pred EecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeE
Q 008384 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (567)
Q Consensus 31 ~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (567)
++.|.+..|+... .. |+......|. .|.++++|+++++++++.+. ...++|+||++. |.+.+ ..++|+
T Consensus 20 ~~~~~~~~y~~~~--~~-~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~v~ggGh~~~--~~~~~--~~~~gv 90 (503)
T 1zr6_A 20 FHEEDSEGWDMDG--TA-FNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGV--QISAKGGGHSYG--SYGFG--GEDGHL 90 (503)
T ss_dssp ECCTTSHHHHHHT--SC-SBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTC--CEEEESSCCCTT--CTTTT--SSSSCE
T ss_pred ecCCCccchHHHh--hh-hhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCC--eEEEECCCcCCC--CCccc--CCCCcE
Confidence 5789999998752 22 5433334454 89999999999999999885 445567777654 21111 024689
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccC-CceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEE
Q 008384 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM-NLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAY 186 (567)
Q Consensus 108 vIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~-Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~ 186 (567)
+|||++||+| ++| ++++|+||||+++.+|+++|.++ |+.+| .|.++.++|||.+++||+|+.+++||.++|+|+++
T Consensus 91 vIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~-~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 167 (503)
T 1zr6_A 91 MLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALS-HGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGA 167 (503)
T ss_dssp EEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECC-CCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEE
T ss_pred EEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeC-CCCCCcCchhhhhcCCCCCcccccccChhheEEEE
Confidence 9999999999 999 88899999999999999999655 58887 47889999999999999999999999999999999
Q ss_pred EEEEecCeEEEEcCCCCChhhhhhccccCCCceEEEEEEEEEEecccee-EEEEecCCC--CHHHHHHHHHHHh
Q 008384 187 EIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYM-KLTYKPVAS--NLREIAQAYADSF 257 (567)
Q Consensus 187 evV~adG~vv~~s~~~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 257 (567)
+||++||++++++++ +++||||++|||+|+|||||+++||++|.++.. ...+...++ ++.++++++.++.
T Consensus 168 ~vV~a~G~i~~~~~~-~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (503)
T 1zr6_A 168 TVVLADASIVHVSET-ENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWA 240 (503)
T ss_dssp EEECTTSCEEEEBTT-BSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCEEEeCCC-CCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 999999999999986 899999999999999999999999999998733 222221122 3456666776664
No 16
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.95 E-value=4.8e-27 Score=258.65 Aligned_cols=217 Identities=18% Similarity=0.182 Sum_probs=167.3
Q ss_pred EEEecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCC
Q 008384 29 VFVVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRAR 105 (567)
Q Consensus 29 ~~~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 105 (567)
+.+++|+|..|+...+ + |.......|. .|.++++|+++++++++.+. ...++|+||++. |.+.+ .++
T Consensus 34 ~~v~~p~~~~Y~~~~~--~-~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~v~v~ggGh~~~--g~~~~---~~~ 103 (530)
T 2y3s_A 34 IDSVAPGDIRYEDLRR--G-ENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGK--RVAVRSGGHCYE--DFVAN---SDV 103 (530)
T ss_dssp CCEECTTSTTHHHHTC--C-SCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTC--CEEEESSCCCSS--STTTC---TTC
T ss_pred ceEECCCCccHHHHHh--H-hhhhccCCCCEEEecCCHHHHHHHHHHHHHcCC--cEEEECCCCCCC--CCccc---CCC
Confidence 3468899999998643 3 4332234454 89999999999999999874 445567777653 21111 247
Q ss_pred eEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHcc-CCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEE
Q 008384 106 HFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCP-MNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVV 184 (567)
Q Consensus 106 givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~-~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~ 184 (567)
|++|||++||+| ++|+++++|+||||+++.+|+++|.+ +|+.++. |.++++||||++++||+|+.+++||+++|+|+
T Consensus 104 gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 181 (530)
T 2y3s_A 104 RVVMDMSRLSAV-GFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLH 181 (530)
T ss_dssp CEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCE-EEcCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccccccchhhhee
Confidence 999999999999 99999999999999999999999985 9998875 78999999999999999999999999999999
Q ss_pred EEEEEEec--CeEE--EEcCCCCC--hhhhhhcccc-CCCceEEEEEEEEE------------Eeccc--eeEEEEecCC
Q 008384 185 AYEIVLAD--GQVV--RATKDNEY--KDLFYAIPWS-QGTLGLLVSAEIKL------------IPIKE--YMKLTYKPVA 243 (567)
Q Consensus 185 ~~evV~ad--G~vv--~~s~~~~~--~dLf~a~~gs-~G~lGiIt~~tl~l------------~p~~~--~~~~~~~~~~ 243 (567)
++|||++| |+++ +++++.++ +|||||+||+ +|+|||||+++||+ +|.++ .....+....
T Consensus 182 ~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 261 (530)
T 2y3s_A 182 AVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPW 261 (530)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEES
T ss_pred eEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecc
Confidence 99999954 9984 44652134 4599999987 69999999999999 88764 2222222112
Q ss_pred C-----CHHHHHHHHHHHh
Q 008384 244 S-----NLREIAQAYADSF 257 (567)
Q Consensus 244 ~-----~~~~~~~~~~~~~ 257 (567)
+ .+.++++.+.++.
T Consensus 262 ~~~~~~~~~~~l~~~~~~~ 280 (530)
T 2y3s_A 262 EGLDEAAFARLVRNHGRWF 280 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHh
Confidence 2 2356677776663
No 17
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.95 E-value=1.8e-27 Score=260.12 Aligned_cols=186 Identities=17% Similarity=0.189 Sum_probs=155.8
Q ss_pred EecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeE
Q 008384 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (567)
Q Consensus 31 ~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (567)
+++|.++.|+..... |.......|. .|.++++|+++++++++++. ...++|+||++. |.+.+ .++|+
T Consensus 12 ~~~p~~~~y~~~~~~---~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~--~v~vrggGh~~~--g~~~~---~~~gv 81 (501)
T 3pop_A 12 TVGREDPRYIELSHS---DNHRFVVEPEEFFLPATPDDVVASLQKAVTEGR--GVACRSGGHCGQ--DFVGT---PRRDL 81 (501)
T ss_dssp EEETTSTTHHHHTCC---SCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTC--CEEEESSCCCSS--STTTS---SCCSE
T ss_pred eECCCCcchHHHHHH---HhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCC--eEEEEeCCccCC--Ccccc---CCCEE
Confidence 678999999987543 4333334555 89999999999999999885 455667777653 21111 24689
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHc-cCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEE
Q 008384 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC-PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAY 186 (567)
Q Consensus 108 vIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~-~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~ 186 (567)
+|||++||+| ++|+++++|+||||+++.+|+++|. ++|+.+| .+.+++++|||++++||+|..+++||+++|+|+++
T Consensus 82 vIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~-~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~ 159 (501)
T 3pop_A 82 VLDLHNLHAI-GPAADGAGVRVGSGATVDQVQKALFRRWNAALP-LGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAV 159 (501)
T ss_dssp EEECTTCCCE-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCC-CCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEecccCCe-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeC-CCCCCCceEeeccccCCCcccccccccHHHhEEEE
Confidence 9999999998 9999999999999999999999996 5799887 57899999999999999999999999999999999
Q ss_pred EEEE--ecCe--EEEEcC--CCCChhhhhhcccc-CCCceEEEEEEEEE
Q 008384 187 EIVL--ADGQ--VVRATK--DNEYKDLFYAIPWS-QGTLGLLVSAEIKL 228 (567)
Q Consensus 187 evV~--adG~--vv~~s~--~~~~~dLf~a~~gs-~G~lGiIt~~tl~l 228 (567)
|||+ +||+ ++++++ +.+|+|||||++|| +|+|||||+++||+
T Consensus 160 evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 160 EVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp EEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred EEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 9999 8899 677632 23789999999998 79999999999998
No 18
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.95 E-value=5.4e-27 Score=257.96 Aligned_cols=217 Identities=17% Similarity=0.191 Sum_probs=166.9
Q ss_pred EEecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCe
Q 008384 30 FVVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARH 106 (567)
Q Consensus 30 ~~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g 106 (567)
.+++|.|+.|+... .++ |.......|. .|.+.++|+++++++++++. ...++|+||++. |...+ .++|
T Consensus 33 ~v~~p~d~~Y~~~~-~~~-~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~v~ggGh~~~--g~~~~---~~~g 103 (523)
T 2wdx_A 33 VKVTPDDPRYLNLK-LRG-ANSRFNGEPDYIHLVGSTQQVADAVEETVRTGK--RVAVRSGGHCFE--DFVDN---PDVK 103 (523)
T ss_dssp EEECTTSTTHHHHH-TCS-SCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTC--CEEEESSCCCSS--SSSSS---TTCC
T ss_pred eEECCCCcchHHHH-hhh-hhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCC--cEEEEcCCCCCC--CCccC---CCCe
Confidence 46789999999865 122 3222233444 88999999999999999885 445567777654 22211 2478
Q ss_pred EEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHc-cCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEE
Q 008384 107 FEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC-PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVA 185 (567)
Q Consensus 107 ivIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~-~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~ 185 (567)
++|||++||+| ++|+++++|+||||+++.+|+++|. ++|+.++. +.++++||||++++||+|+.+++||+++|+|++
T Consensus 104 vvIdl~~m~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~ 181 (523)
T 2wdx_A 104 VIIDMSLLTEI-AYDPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYA 181 (523)
T ss_dssp EEEECTTCCCE-EEETTTTEEEECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEE
T ss_pred EEEEcccCCCE-EEcCCCCEEEEcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccccccChhheEEE
Confidence 99999999999 9999999999999999999999998 59999875 889999999999999999999999999999999
Q ss_pred EEEEEec--CeEEE--EcCCCCC--hhhhhhcccc-CCCceEEEEEEEEE-----------Eeccc--eeEEEEecCCC-
Q 008384 186 YEIVLAD--GQVVR--ATKDNEY--KDLFYAIPWS-QGTLGLLVSAEIKL-----------IPIKE--YMKLTYKPVAS- 244 (567)
Q Consensus 186 ~evV~ad--G~vv~--~s~~~~~--~dLf~a~~gs-~G~lGiIt~~tl~l-----------~p~~~--~~~~~~~~~~~- 244 (567)
+|||++| |++++ +++..++ +||||++||+ +|+|||||+++||+ +|.++ .....+....+
T Consensus 182 ~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 261 (523)
T 2wdx_A 182 VEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWAG 261 (523)
T ss_dssp EEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGGG
T ss_pred EEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEecccc
Confidence 9999965 99754 3542234 4599999975 69999999999999 88875 22222222111
Q ss_pred ----CHHHHHHHHHHHh
Q 008384 245 ----NLREIAQAYADSF 257 (567)
Q Consensus 245 ----~~~~~~~~~~~~~ 257 (567)
.+.++++++.++.
T Consensus 262 ~~~~~~~~~l~~~~~~~ 278 (523)
T 2wdx_A 262 MTEAAFSRLLRNHGEWY 278 (523)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 1245677776663
No 19
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.94 E-value=1.1e-26 Score=255.61 Aligned_cols=216 Identities=18% Similarity=0.187 Sum_probs=166.1
Q ss_pred EecCCCcchhhhhhcccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeE
Q 008384 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (567)
Q Consensus 31 ~~lp~s~~~~~~~~~~n~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (567)
+++|+|+.|+... .++ |.......|. .|.++++|+++++++++.+. ...++|+||++. |.+.+ .++|+
T Consensus 32 v~~p~d~~Y~~~~-~~~-~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~vrggGh~~~--g~~~~---~~~gv 102 (521)
T 2ipi_A 32 KVDRVDRRYQDLV-TRG-FNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQ--RIAVRSGGHCFE--GFVDD---PAVRA 102 (521)
T ss_dssp EEESSSTTHHHHH-TCC-SCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTC--CEEEESSCCCTT--CGGGC---TTCCE
T ss_pred EECCCCcchHHHH-hcc-ccccccCCCCEEEEcCCHHHHHHHHHHHHHcCC--eEEEECCCcCCC--CCccc---CCCeE
Confidence 6779999999764 123 3333333454 89999999999999999885 445567777653 21111 24789
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHc-cCCceeeecCCCCccchhhhhcccCCCCCCcccCcccceEEEE
Q 008384 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC-PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAY 186 (567)
Q Consensus 108 vIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~-~~Gl~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~ 186 (567)
+|||++||+| ++|+++++|+||||+++.+|+++|. ++|+.+|. +.++.+||||++++||+|+.+++||+++|+|+++
T Consensus 103 vIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 180 (521)
T 2ipi_A 103 VIDMSQMRQV-FYDSGKRAFAVEPGATLGETYRALYLDWGVTIPA-GVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAV 180 (521)
T ss_dssp EEECTTCCCE-EEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCC-CSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEecccCCCe-EEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCC-CCCCCcccCCcccCCCCCccccccccHhhcEEEE
Confidence 9999999999 9999999999999999999999997 79999874 7789999999999999999999999999999999
Q ss_pred EEEEec--CeEE--EEcCCCCC--hhhhhhcccc-CCCceEEEEEEEEE-----------Eeccc--eeEEEEecCCCC-
Q 008384 187 EIVLAD--GQVV--RATKDNEY--KDLFYAIPWS-QGTLGLLVSAEIKL-----------IPIKE--YMKLTYKPVASN- 245 (567)
Q Consensus 187 evV~ad--G~vv--~~s~~~~~--~dLf~a~~gs-~G~lGiIt~~tl~l-----------~p~~~--~~~~~~~~~~~~- 245 (567)
|||++| |+++ ++++..++ +||||++||+ +|+|||||+++||+ .|.++ .....+....++
T Consensus 181 evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 260 (521)
T 2ipi_A 181 EVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSAL 260 (521)
T ss_dssp EEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTC
T ss_pred EEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEeccccc
Confidence 999987 9874 44542234 4699999985 69999999999999 88865 222222211222
Q ss_pred ----HHHHHHHHHHHh
Q 008384 246 ----LREIAQAYADSF 257 (567)
Q Consensus 246 ----~~~~~~~~~~~~ 257 (567)
+.++++++.++.
T Consensus 261 ~~~~~~~~l~~~~~~~ 276 (521)
T 2ipi_A 261 TEEAFTRIIDNHGAWH 276 (521)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 246677776663
No 20
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.94 E-value=3.3e-25 Score=243.95 Aligned_cols=191 Identities=21% Similarity=0.205 Sum_probs=149.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQI 138 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L 138 (567)
.|.+.++|+++++++++++. ...++|+||++.. |.+.. ...+|++|||++||+|+++|+++.+|+||||+++.+|
T Consensus 62 ~P~s~~ev~~~v~~a~~~~~--pv~~~g~G~~~~~-g~~~~--~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l 136 (520)
T 1wvf_A 62 TATTVEQVQGVVKICNEHKI--PIWTISTGRNFGY-GSAAP--VQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQM 136 (520)
T ss_dssp ECCSHHHHHHHHHHHHHHTC--CEEEESSCCCTTT-TTTSC--SSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHH
T ss_pred ecCCHHHHHHHHHHHHHCCC--cEEEEcCCCCCCC-CCCCC--CCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHH
Confidence 89999999999999999885 3344566665421 22111 0247999999999999999999999999999999999
Q ss_pred HHHHccCCceeeec--CCCCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEEEEcC-CCCChhhhhhccccC
Q 008384 139 SRATCPMNLSLAVV--AELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK-DNEYKDLFYAIPWSQ 215 (567)
Q Consensus 139 ~~~l~~~Gl~~~~~--p~~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~~s~-~~~~~dLf~a~~gs~ 215 (567)
+++|.++|+.+|+. |+...+||||+++++|.+.. +||.++|+|++++||++||++++++. ..+++|+|++.+|+.
T Consensus 137 ~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~ 214 (520)
T 1wvf_A 137 YDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGY 214 (520)
T ss_dssp HHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCS
T ss_pred HHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCC
Confidence 99999999998765 65568999999876665543 89999999999999999999999864 125778877777775
Q ss_pred C----------CceEEEEEEEEEEeccceeEEEEecCCCCHHH---HHHHHHHHh
Q 008384 216 G----------TLGLLVSAEIKLIPIKEYMKLTYKPVASNLRE---IAQAYADSF 257 (567)
Q Consensus 216 G----------~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 257 (567)
| +|||||+++||+.|.|+....... .|.++++ +++++.++.
T Consensus 215 Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~-~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 215 GPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEV-IFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp SCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEE-EECCGGGHHHHHHHHHHHH
T ss_pred CcchhhhccCCceEEEEEEEEEEEecCCeEEEEEE-EeCCHHHHHHHHHHHHHHH
Confidence 4 999999999999999985442222 2455444 444555553
No 21
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.94 E-value=2.6e-25 Score=246.64 Aligned_cols=186 Identities=17% Similarity=0.137 Sum_probs=140.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEc-CCCCCceEEeCCCcEEEEcCCCcHHH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDL-SAFRNILDIDKDRMIAKVEPLVNMGQ 137 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdl-s~l~~il~id~~~~~v~VeaGv~~~~ 137 (567)
.|.+.++|++++++|++++. ...++|+|+++.. |+... ..++|++||| ++||+|+++|+++.+|+|||||++.+
T Consensus 76 ~P~s~~eV~~iv~~a~~~~~--pv~~~g~Gt~~~~-gg~~p--~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~ 150 (560)
T 1e8g_A 76 APRNVADVQSIVGLANKFSF--PLWPISIGRNSGY-GGAAP--RVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHD 150 (560)
T ss_dssp CCSSHHHHHHHHHHHHHHTC--CEEEESSCCCTTT-TTTCC--SSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHH
T ss_pred eCCCHHHHHHHHHHHHHcCC--cEEEecCCCcCCc-CCCCC--CcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHH
Confidence 89999999999999999885 3344555554311 21110 0247999999 99999999999999999999999999
Q ss_pred HHHHHccCCce--eeecCC-CCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEEEEcCC-CCCh--------
Q 008384 138 ISRATCPMNLS--LAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKD-NEYK-------- 205 (567)
Q Consensus 138 L~~~l~~~Gl~--~~~~p~-~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~~s~~-~~~~-------- 205 (567)
|+++|.++|+. +|..|. ...+||||+++++|.+. .+||.++|+|++++||++||++++++.. ..++
T Consensus 151 l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~--~~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~ 228 (560)
T 1e8g_A 151 LHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGY--TPYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGL 228 (560)
T ss_dssp HHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCS--STTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTC
T ss_pred HHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCc--ccceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccc
Confidence 99999999999 876553 34789999987666653 4999999999999999999999998752 1220
Q ss_pred -------hhhhhcc-c----------cCCCceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHH
Q 008384 206 -------DLFYAIP-W----------SQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQA 252 (567)
Q Consensus 206 -------dLf~a~~-g----------s~G~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~ 252 (567)
+.+|.++ + ++|+|||||+++|++.|.|+....... .|.+++++.++
T Consensus 229 ~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~-~f~~~~~a~~~ 292 (560)
T 1e8g_A 229 KPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLI-TLPKDGDLKQA 292 (560)
T ss_dssp CGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEE-EECSTTHHHHH
T ss_pred hhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEE-EcCCHHHHHHH
Confidence 3444433 3 348999999999999999885443332 24566654443
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.89 E-value=8.5e-24 Score=233.61 Aligned_cols=192 Identities=9% Similarity=-0.011 Sum_probs=155.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccc--cCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYK--RARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMG 136 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~--~~~givIdls~l~~il~id~~~~~v~VeaGv~~~ 136 (567)
.|.+.++|++++++|++++. ..+++|+++++. |.+..... ..++++|||++||+|+++|+ +++|+||||+++.
T Consensus 51 ~P~s~~eV~~iv~~a~~~~~--~v~~~GgGt~~~--G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv~l~ 125 (571)
T 1f0x_A 51 FPGSLLELWRVLKACVTADK--IILMQAANTGLT--EGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGTTLY 125 (571)
T ss_dssp CCSSHHHHHHHHHHHHHTTC--EEEEESSCCCSS--STTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTCBHH
T ss_pred eeCCHHHHHHHHHHHHHcCC--CEEEECCCcCCC--CCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCCcCHH
Confidence 89999999999999999874 445567776553 22221100 01389999999999989995 5799999999999
Q ss_pred HHHHHHccCCceeeecCC--CCccchhhhhcccCCCCCCcccCcccc----------------eEEEEEEEEecCeEEEE
Q 008384 137 QISRATCPMNLSLAVVAE--LDDLTVGGLINGYGIEGSSHIYGLFSD----------------TVVAYEIVLADGQVVRA 198 (567)
Q Consensus 137 ~L~~~l~~~Gl~~~~~p~--~~~~tvGG~i~~gg~g~~s~~~G~~~d----------------~V~~~evV~adG~vv~~ 198 (567)
+|.++|.++|+.+|++++ +..+||||+++.++.|..+.+||.++| +|++++||++||+++++
T Consensus 126 ~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~ 205 (571)
T 1f0x_A 126 SLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSK 205 (571)
T ss_dssp HHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHH
T ss_pred HHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEe
Confidence 999999999998876663 356799999977777777899999999 99999999999999987
Q ss_pred c----------------CCCCCh-----------------hhhhhc--cccCCCceEEEEEEEEEEeccceeEEEEecCC
Q 008384 199 T----------------KDNEYK-----------------DLFYAI--PWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVA 243 (567)
Q Consensus 199 s----------------~~~~~~-----------------dLf~a~--~gs~G~lGiIt~~tl~l~p~~~~~~~~~~~~~ 243 (567)
+ +.+.++ ||++++ +||+|+||| |+++|+++|.|+.....+. .+
T Consensus 206 ~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~-~~ 283 (571)
T 1f0x_A 206 LDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYI-GT 283 (571)
T ss_dssp HHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEE-EE
T ss_pred cCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEE-Ee
Confidence 6 223444 999888 999999999 9999999999986554443 36
Q ss_pred CCHHHHHHHHHHHh
Q 008384 244 SNLREIAQAYADSF 257 (567)
Q Consensus 244 ~~~~~~~~~~~~~~ 257 (567)
.+++++.+++.++.
T Consensus 284 ~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 284 NQPEVLTEIRRHIL 297 (571)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 78999888887764
No 23
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.81 E-value=1.3e-19 Score=176.99 Aligned_cols=116 Identities=18% Similarity=0.152 Sum_probs=102.7
Q ss_pred eEEeCCCcEEEEcCCCcHHHHHHHHccCCceeeecCC-CCccchhhhhcccCCCCCCcccCcccceEEEEEEEEecCeEE
Q 008384 118 LDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVV 196 (567)
Q Consensus 118 l~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~~~~~p~-~~~~tvGG~i~~gg~g~~s~~~G~~~d~V~~~evV~adG~vv 196 (567)
+++|+++++|+||||+++.+|+++|.++|+++|+.|+ ++. ||||++++++.+ .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 3899999999999999999999999999999998886 555 999999765544 889999 9999999999999999
Q ss_pred EEcCC----CCChhhhhhccccCCCceEEEEEEEEEEeccceeEEE
Q 008384 197 RATKD----NEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLT 238 (567)
Q Consensus 197 ~~s~~----~~~~dLf~a~~gs~G~lGiIt~~tl~l~p~~~~~~~~ 238 (567)
+++.+ ..++||||+++||.|+|||||+++||+.|.++.....
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~ 121 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLR 121 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEE
T ss_pred EECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEE
Confidence 99863 2468999999999999999999999999998854433
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.79 E-value=2.3e-19 Score=185.06 Aligned_cols=147 Identities=15% Similarity=0.170 Sum_probs=118.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccC---CeEEEEcCCCCCceEEeCCCcEEEEcCCCcH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA---RHFEVDLSAFRNILDIDKDRMIAKVEPLVNM 135 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~---~givIdls~l~~il~id~~~~~v~VeaGv~~ 135 (567)
.|.+.++|+++++++++.+. |+..+|.|+|....+ +|++|||++|++| .+|. .+++||||++|
T Consensus 60 ~P~s~eev~~~v~~a~~~~~-----------pv~v~GgGsnl~~~~~~~~gvvI~l~~~~~I-~~d~--~~v~v~aG~~~ 125 (322)
T 3tx1_A 60 MPKTIEEAQEVVAYCHQNKI-----------PLTILGNGSNLIIKDGGIRGVILHLDLLQTI-ERNN--TQIVAMSGAKL 125 (322)
T ss_dssp ECSSHHHHHHHHHHHHHTTC-----------CEEEESCCTTEEECTTCEEEEEEECTTCCCE-EEET--TEEEEETTSBH
T ss_pred EeCCHHHHHHHHHHHHHcCC-----------cEEEECCccCCCcCCCCCCeEEEECCCCCcE-EECC--CEEEEecCcCH
Confidence 78999999999999999875 555555555544332 5899999999998 6764 59999999999
Q ss_pred HHHHHHHccCCce----eeecCCCCccchhhhhc--ccCCCCCCcccCcccceEEEEEEEEecCeEEEEcCCCCChhhhh
Q 008384 136 GQISRATCPMNLS----LAVVAELDDLTVGGLIN--GYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFY 209 (567)
Q Consensus 136 ~~L~~~l~~~Gl~----~~~~p~~~~~tvGG~i~--~gg~g~~s~~~G~~~d~V~~~evV~adG~vv~~s~~~~~~dLf~ 209 (567)
.+|++++.++|+. ++..| .||||++. +||+| |.++|+|+++++|++||++++++++ |++|
T Consensus 126 ~~l~~~l~~~Gl~Gle~~~giP----gTVGGav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~~~----~~~~ 191 (322)
T 3tx1_A 126 IDTAKFALNESLSGLEFACGIP----GSIGGALHMNAGAYG------GEISDVLEAATVLTQTGELKKLKRS----ELKA 191 (322)
T ss_dssp HHHHHHHHHTTEESCGGGTTCC----SBHHHHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEEGG----GCC-
T ss_pred HHHHHHHHHcCCcccccCCCCc----chhHHHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEechH----HcCc
Confidence 9999999999995 33344 48999985 33333 7999999999999999999999864 8999
Q ss_pred hccccC-C-CceEEEEEEEEEEeccc
Q 008384 210 AIPWSQ-G-TLGLLVSAEIKLIPIKE 233 (567)
Q Consensus 210 a~~gs~-G-~lGiIt~~tl~l~p~~~ 233 (567)
++|++. | ..||||+++|++.|.++
T Consensus 192 ~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 192 AYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp -CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred chhhcccCCCCEEEEEEEEEEEeCCH
Confidence 999984 4 57899999999999864
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.79 E-value=3.6e-19 Score=184.41 Aligned_cols=147 Identities=17% Similarity=0.145 Sum_probs=119.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQI 138 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L 138 (567)
.|.+.++|+++++++++++. ...++|+++++. +... ..+|++|||++||+| ++|. .+++||||+++.+|
T Consensus 54 ~P~s~eev~~~l~~a~~~~~--pv~~~GgGtnl~--~~~~----~~~gvvI~l~~m~~i-~id~--~~v~v~aGv~~~~l 122 (326)
T 1hsk_A 54 TPTKNEEVQAVVKYAYQNEI--PVTYLGNGSNII--IREG----GIRGIVISLLSLDHI-EVSD--DAIIAGSGAAIIDV 122 (326)
T ss_dssp CCSSHHHHHHHHHHHHHTTC--CEEEESSCSSEE--ECTT----CEEEEEEECTTCCCE-EEET--TEEEEETTSBHHHH
T ss_pred EcCCHHHHHHHHHHHHHcCC--CEEEECCCCccc--cCCC----CCCeEEEEeCCCCce-EEcC--CEEEEeCCCcHHHH
Confidence 78999999999999998775 233445555432 1111 015899999999999 9984 69999999999999
Q ss_pred HHHHccCCc----eeeecCCCCccchhhhhcccCCCCCCcccC-cccceEEEEEEEEecCeEEEEcCCCCChhhhhhccc
Q 008384 139 SRATCPMNL----SLAVVAELDDLTVGGLINGYGIEGSSHIYG-LFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPW 213 (567)
Q Consensus 139 ~~~l~~~Gl----~~~~~p~~~~~tvGG~i~~gg~g~~s~~~G-~~~d~V~~~evV~adG~vv~~s~~~~~~dLf~a~~g 213 (567)
++++.++|+ +++..|+ ||||+++.++.+ || .++|+|.++++|++||++++++.+ +++|+++.
T Consensus 123 ~~~l~~~Gl~gLe~~~~~Pg----tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~~----~~~~gyr~ 189 (326)
T 1hsk_A 123 SRVARDYALTGLEFACGIPG----SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTTK----ELELDYRN 189 (326)
T ss_dssp HHHHHHTTEESCGGGTTCCS----BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEETT----TTTCBTTB
T ss_pred HHHHHHCCCccccccCCCcc----hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEEChH----HcCCCccc
Confidence 999999999 6776666 899999543322 77 999999999999999999999875 78899987
Q ss_pred c----CCCceEEEEEEEEEEec
Q 008384 214 S----QGTLGLLVSAEIKLIPI 231 (567)
Q Consensus 214 s----~G~lGiIt~~tl~l~p~ 231 (567)
+ .| ||||+++|++.|.
T Consensus 190 ~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 190 SIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp CHHHHTT--CEEEEEEEECEEC
T ss_pred cccCCCC--EEEEEEEEEEEcC
Confidence 4 35 9999999999998
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.74 E-value=4.8e-18 Score=177.17 Aligned_cols=149 Identities=15% Similarity=0.111 Sum_probs=121.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccC--CeEEEEcCCCCCceEEeC--CCcEEEEcCCCc
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA--RHFEVDLSAFRNILDIDK--DRMIAKVEPLVN 134 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~--~givIdls~l~~il~id~--~~~~v~VeaGv~ 134 (567)
.|.+.++|+++++++++++. |+..+|.|+|....+ +|++|+++ |++| +++. ++.+++|+||++
T Consensus 36 ~p~s~eel~~~v~~a~~~~i-----------pv~vlGgGSNll~~d~~~GvVI~l~-~~~i-~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 36 VAESIDDLKALYCSAEWASL-----------PKLIIGKGSNMLFTCHYTGMIVVNR-LNGI-EHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp EECSHHHHHHHHSSSTTTTS-----------CEEEESSCTTEEECSCEEEEEEEEC-CCCE-EEEECSSEEEEEEETTSB
T ss_pred EECCHHHHHHHHHHHHHcCC-----------CEEEECCCcCcccCCCCCeEEEEcC-CCce-EEeccCCceEEEEeCCCc
Confidence 68888998888888887775 777777777665433 79999998 9998 7753 456899999999
Q ss_pred HHHHHHHHccCCce----eeecCCCCccchhhhhcccCCCCCCcccCc-ccceEEEEEEEEe-cCeEEEEcCCCCChhhh
Q 008384 135 MGQISRATCPMNLS----LAVVAELDDLTVGGLINGYGIEGSSHIYGL-FSDTVVAYEIVLA-DGQVVRATKDNEYKDLF 208 (567)
Q Consensus 135 ~~~L~~~l~~~Gl~----~~~~p~~~~~tvGG~i~~gg~g~~s~~~G~-~~d~V~~~evV~a-dG~vv~~s~~~~~~dLf 208 (567)
|.+|.+++.++||. +...|+ ||||++.. +.+.||. ++|+|+++++|++ +|++++++++ |++
T Consensus 103 ~~~l~~~a~~~Gl~GlE~l~gIPG----tVGGav~~-----NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~~----dl~ 169 (357)
T 3i99_A 103 WPSLVSWCVEQGIGGLENLALIPG----CAGSAPIQ-----NIGAYGVEFKDVCDYVEYLCLETGTVKRLTME----ECQ 169 (357)
T ss_dssp HHHHHHHHHHTTCTTCGGGTTCCS----BGGGTTTT-----TCEETTEEGGGTEEEEEEEETTTTEEEEEETG----GGC
T ss_pred HHHHHHHHHHcCCcCccccCCCCc----hhHHHHHh-----chhhhhhhHHhhEeEEEEEECCCCcEEEEeHH----HcC
Confidence 99999999999995 333333 88888743 2346786 9999999999999 9999999865 999
Q ss_pred hhccccC-----CCceEEEEEEEEEEeccc
Q 008384 209 YAIPWSQ-----GTLGLLVSAEIKLIPIKE 233 (567)
Q Consensus 209 ~a~~gs~-----G~lGiIt~~tl~l~p~~~ 233 (567)
|+||+|. |++||||+++|+|.|.+.
T Consensus 170 f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 170 FGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9999984 479999999999999764
No 27
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.73 E-value=2.9e-17 Score=170.61 Aligned_cols=153 Identities=14% Similarity=0.046 Sum_probs=122.3
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccC--CeEEEEcCCCCCceEEeCCC-cEEEEcCCCcH
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA--RHFEVDLSAFRNILDIDKDR-MIAKVEPLVNM 135 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~--~givIdls~l~~il~id~~~-~~v~VeaGv~~ 135 (567)
.|.+.+++.++++++++++. |+..+|.|+|....+ +|++|+++ |++|..++.++ .+++|+||++|
T Consensus 20 ~p~s~eel~~~l~~a~~~~~-----------pv~vlGgGSnll~~d~~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 20 CAEDEQQLLNAWQYATAEGQ-----------PVLILGEGSNVLFLEDYRGTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp EESSHHHHHHHHHHHHHTTC-----------CEEEESSCTTEEECSCEEEEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred EeCCHHHHHHHHHHHHHcCC-----------CEEEECCCcCCcccCCCCeEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 68999999999999998875 666666666655433 69999996 99986677776 69999999999
Q ss_pred HHHHHHHccCCceee-ecCCCCccchhhhhcccCCCCCCcccC-cccceEEEEEEEEe-cCeEEEEcCCCCChhhhhhcc
Q 008384 136 GQISRATCPMNLSLA-VVAELDDLTVGGLINGYGIEGSSHIYG-LFSDTVVAYEIVLA-DGQVVRATKDNEYKDLFYAIP 212 (567)
Q Consensus 136 ~~L~~~l~~~Gl~~~-~~p~~~~~tvGG~i~~gg~g~~s~~~G-~~~d~V~~~evV~a-dG~vv~~s~~~~~~dLf~a~~ 212 (567)
.+|.+++.++||... ....++ .||||++.. +.+.|| .++|+|.++++|++ +|++++++.+ |++|++|
T Consensus 88 ~~l~~~~~~~Gl~Gle~~~gIP-GtVGGa~~~-----NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~~----d~~~gYR 157 (340)
T 1uxy_A 88 HRLVKYTLQEGMPGLENLALIP-GCVGSSPIQ-----NIGAYGVELQRVCAYVDSVELATGKQVRLTAK----ECRFGYR 157 (340)
T ss_dssp HHHHHHHHHTTCCSCGGGTTCC-SBGGGTTTT-----TCEETTEEGGGTEEEEEEEETTTTEEEEEETG----GGTCBTT
T ss_pred HHHHHHHHHCCCCccccccCCc-cchhHHHHh-----ccccchhhHHhheeEEEEEECCCCcEEEEeHH----HhccccC
Confidence 999999999999421 112222 388888742 223367 59999999999996 9999999865 9999999
Q ss_pred ccC-----CCceEEEEEEEEEEeccc
Q 008384 213 WSQ-----GTLGLLVSAEIKLIPIKE 233 (567)
Q Consensus 213 gs~-----G~lGiIt~~tl~l~p~~~ 233 (567)
+|. |++||||+++|++.|.+.
T Consensus 158 ~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 158 DSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 984 369999999999999863
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.66 E-value=1.6e-16 Score=159.58 Aligned_cols=154 Identities=15% Similarity=0.129 Sum_probs=116.2
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccC----CeEEEEcCCCCCceEEeCCCcEEEEcCCCc
Q 008384 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA----RHFEVDLSAFRNILDIDKDRMIAKVEPLVN 134 (567)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~givIdls~l~~il~id~~~~~v~VeaGv~ 134 (567)
.|.+.++|++++ +. |+..+|.++|....+ +|++|++++|++| ++|. +|+||++
T Consensus 27 ~p~s~edv~~~v------~i-----------pv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I-~vd~-----~v~aG~~ 83 (268)
T 2gqt_A 27 TVETREELKRAT------EA-----------PYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY-DLKG-----WVGAGTL 83 (268)
T ss_dssp EECSHHHHHHHT------TS-----------CEEECSSSSSEEECTTCCSSEEEEECGGGGCB-CTTS-----EEETTSB
T ss_pred EeCCHHHHHHHh------CC-----------CeEEcCCCcCceecCCCcCCeEEEEcCCCCCc-EEcC-----EEECCCC
Confidence 567777777776 43 677777777765543 2999999999998 6652 9999999
Q ss_pred HHHHHHHHccCCceeee-cCCCCccchhhhhcccCCCCCCcccC-cccceEEEEEEEEecCeEEEEcCCCCChhhhhhcc
Q 008384 135 MGQISRATCPMNLSLAV-VAELDDLTVGGLINGYGIEGSSHIYG-LFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIP 212 (567)
Q Consensus 135 ~~~L~~~l~~~Gl~~~~-~p~~~~~tvGG~i~~gg~g~~s~~~G-~~~d~V~~~evV~adG~vv~~s~~~~~~dLf~a~~ 212 (567)
|.+|.+++.++||...- ...++ .||||++..+ .+.|| .++|+|+++++| +||++++++++ |++|+||
T Consensus 84 ~~~l~~~~~~~Gl~Gle~~~giP-GtvGGav~~N-----aGayG~e~~d~v~~v~vv-~~G~v~~~~~~----~l~~~YR 152 (268)
T 2gqt_A 84 LPLLVQEAARAGLSGLEGLLGIP-AQVGGAVKMN-----AGTRFGEMADALEAVEVF-HDGAFHVYCPE----ELGFGYR 152 (268)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCC-CBHHHHHHTT-----CEETTEEGGGGEEEEEEE-ETTEEEEECGG----GSCCBTT
T ss_pred HHHHHHHHHHcCCcCCccccCcc-chhHHHHHhc-----cccCchhHHhheeEEEEE-CCCcEEEEchH----HcccccC
Confidence 99999999999995221 11233 3899998432 22478 799999999999 99999999764 8999999
Q ss_pred ccCC-CceEEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHH
Q 008384 213 WSQG-TLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADS 256 (567)
Q Consensus 213 gs~G-~lGiIt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (567)
+|.- .-||||+++|++.|.+. .++.+.++++.+.
T Consensus 153 ~s~~~~~gIVt~~~~~L~~~~~----------~~i~~~~~~v~~~ 187 (268)
T 2gqt_A 153 KSHLPPGGIVTRVRLKLKERPK----------EEILRRMAEVDRA 187 (268)
T ss_dssp BCCCSTTCEEEEEEECCEECCH----------HHHHHHHHHHHHH
T ss_pred CCCcCCCceEEEEEEEEEeCCH----------HHHHHHHHHHHHH
Confidence 9851 12499999999999742 3455556666555
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.85 E-value=1.3e-05 Score=81.04 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=73.3
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCcHHHHHHH-HccCCcee-----eecCC---CCccchhhhhcccCCCC
Q 008384 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISRA-TCPMNLSL-----AVVAE---LDDLTVGGLINGYGIEG 171 (567)
Q Consensus 104 ~~givIdls~---l~~il~id~~~~~v~VeaGv~~~~L~~~-l~~~Gl~~-----~~~p~---~~~~tvGG~i~~gg~g~ 171 (567)
..+++||+++ |+.| +.+. +.+++++|+++.+|.+. +.+.++.. ....+ -+..||||++.++. +
T Consensus 47 ~~~~lIdl~~i~eL~~i-~~~~--~~l~iGA~~tl~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~-~- 121 (287)
T 1ffv_C 47 QPEHLIDINRIPELRGI-REEG--STVVIGAMTVENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGD-P- 121 (287)
T ss_dssp CCSEEEECTTCGGGCCE-EEET--TEEEEETTCBHHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCC-T-
T ss_pred CCCEEEECCCChhhcce-EecC--CEEEEccCCcHHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCC-C-
Confidence 3689999985 6776 6543 56999999999999963 33333311 00112 12469999996532 1
Q ss_pred CCcccCcccceEE-------EEEEEEecCeEEEEcCCCCChhhhhhcccc-CCCceEEEEEEEEEEec
Q 008384 172 SSHIYGLFSDTVV-------AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIPI 231 (567)
Q Consensus 172 ~s~~~G~~~d~V~-------~~evV~adG~vv~~s~~~~~~dLf~a~~gs-~G~lGiIt~~tl~l~p~ 231 (567)
.+|.+. .+++..++| ..+...+ |+|.+++-+ ...-.|||+++|.+.+.
T Consensus 122 -------~~D~~~~l~Al~A~v~~~~~~G-~r~i~~~----df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 122 -------GNDHPALSIAVEAHFVLEGPNG-RRTVPAD----GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp -------TCSHHHHHHHTTCEEEEEETTE-EEEEEST----TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred -------cHHHHHHHHHcCcEEEEEcCCc-eEEEEHH----HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 344444 588888999 5666554 888887654 23346999999987653
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.88 E-value=0.00038 Score=74.84 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=73.7
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCcHHHHHHHHccCCce--------eeecCCCCccchhhhhcccCCCCC
Q 008384 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLS--------LAVVAELDDLTVGGLINGYGIEGS 172 (567)
Q Consensus 104 ~~givIdls~---l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~Gl~--------~~~~p~~~~~tvGG~i~~gg~g~~ 172 (567)
..+.+||+++ |+.| +.+ ++.++++||+++.+|.+.+.+ ++. +...+--+..||||++.++..
T Consensus 218 ~~~~lIdl~~i~eL~~I-~~~--~~~l~IGA~vtl~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp--- 290 (462)
T 2w3s_A 218 DLPEVAFLSHCKDLAQI-RET--PDGYGIGAGVTIAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP--- 290 (462)
T ss_dssp CCCSEEECTTCGGGSCE-EEE--TTEEEEETTCBHHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---
T ss_pred CCCEEEEcCCChhhCcE-EEc--CCEEEEccCCcHHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC---
Confidence 4678999988 6776 665 346999999999999988443 331 111111244699999976442
Q ss_pred CcccCcccceEE----EEEEEEecCeEEEEcCCCCChhhhhhcccc-CCCceEEEEEEEEEEe
Q 008384 173 SHIYGLFSDTVV----AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIP 230 (567)
Q Consensus 173 s~~~G~~~d~V~----~~evV~adG~vv~~s~~~~~~dLf~a~~gs-~G~lGiIt~~tl~l~p 230 (567)
.+.+...++ .+++..++|+ .+.. -.|+|.+++-+ ...-.||+++.|...+
T Consensus 291 ---~sD~~~~L~ALdA~v~l~~~~G~-R~vp----~~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 291 ---IGDGPPALIAMGASLTLRRGQER-RRMP----LEDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp ---TCSHHHHHHHTTCEEEEEBTTBC-CCCB----GGGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred ---cchHHHHHHHcCCEEEEEeCCce-EEEE----HHHhhcccccccCCCCcEEEEEEEecCC
Confidence 256666666 7788888883 3333 34777776543 2233599999987654
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=96.41 E-value=0.0012 Score=66.50 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=67.2
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCcHHHHHH--HHccCC--ce-----eeecCC-CCccchhhhhcccCCC
Q 008384 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISR--ATCPMN--LS-----LAVVAE-LDDLTVGGLINGYGIE 170 (567)
Q Consensus 104 ~~givIdls~---l~~il~id~~~~~v~VeaGv~~~~L~~--~l~~~G--l~-----~~~~p~-~~~~tvGG~i~~gg~g 170 (567)
..+.+||+++ |+.| +.+ ++.+++++++++.+|.+ .+.++- +. +. .+. -+..||||+++++.
T Consensus 47 ~~~~lIdl~~i~eL~~I-~~~--~~~l~IGA~~t~~~l~~~~~~~~~~p~L~~a~~~ia-~~qiRN~gTiGGnl~~a~-- 120 (288)
T 1n62_C 47 TPEHLVDLRDIGDLVGI-REE--GTDVVIGAMTTQHALIGSDFLAAKLPIIRETSLLIA-DPQIRYMGTIGGNAANGD-- 120 (288)
T ss_dssp CCSEEEECTTCGGGSCE-EEE--TTEEEEETTCBHHHHHHCHHHHHHCHHHHHHHTTSS-CHHHHHHCBHHHHHHSCC--
T ss_pred CCCEEEECCCChhhcce-Eec--CCEEEEccCCcHHHHhcChHHHHHHHHHHHHHHHhC-CHHHHccccccchhccCC--
Confidence 4689999986 5665 554 45799999999999995 443321 11 11 111 12459999996532
Q ss_pred CCCcccCcccceEE-------EEEEEEecCeEEEEcCCCCChhhhhhcccc-CCCceEEEEEEEEEEe
Q 008384 171 GSSHIYGLFSDTVV-------AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIP 230 (567)
Q Consensus 171 ~~s~~~G~~~d~V~-------~~evV~adG~vv~~s~~~~~~dLf~a~~gs-~G~lGiIt~~tl~l~p 230 (567)
..+|.+. .+++..++|+ .+...+ |+|.+++-. ...-.|||++.|...+
T Consensus 121 -------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~~~----df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 121 -------PGNDMPALMQCLGAAYELTGPEGA-RIVAAR----DYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp -------TTCSHHHHHHHHTCEEEEEETTEE-EEEEHH----HHEEETTEESCCTTCEEEEEEEECCC
T ss_pred -------CchHHHHHHHHhCcEEEEEeCCcc-EEEEHH----HHhcCcccccCCCCCEEEEEEeCCCC
Confidence 2344443 5667778883 444433 776665432 2334699999987654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=94.90 E-value=0.0094 Score=60.02 Aligned_cols=108 Identities=18% Similarity=0.102 Sum_probs=65.6
Q ss_pred CCeEEEEcCCC---CCceEEeCCCcEEEEcCCCcHHHHHH--HHccCC--c-----eeeecCC-CCccchhhhhcccCCC
Q 008384 104 ARHFEVDLSAF---RNILDIDKDRMIAKVEPLVNMGQISR--ATCPMN--L-----SLAVVAE-LDDLTVGGLINGYGIE 170 (567)
Q Consensus 104 ~~givIdls~l---~~il~id~~~~~v~VeaGv~~~~L~~--~l~~~G--l-----~~~~~p~-~~~~tvGG~i~~gg~g 170 (567)
....+||++++ +.| +. +++.++++++|++.+|.+ .+.++- + .+. .+. -+..|+||.+++ +.
T Consensus 46 ~~~~lIdl~~i~eL~~I-~~--~~~~l~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ia-s~qiRN~aTiGGNi~~-a~- 119 (288)
T 1t3q_C 46 YPSCLVDLRNVSELFEI-SQ--SAGILSVGAMVTHFRNKTDPTVAKCVPILPKVLAHVA-HQAVRNRGTLGGSLAH-AD- 119 (288)
T ss_dssp CCSEEEECTTCGGGGCE-EE--ETTEEEEETTCBHHHHHHCHHHHHHCTHHHHHHTTSS-CHHHHTTCBHHHHHHH-TC-
T ss_pred CCCEEEECCCChhhcCe-EE--cCCEEEEcCCCcHHHHhcCHHHHHHHHHHHHHHHHhC-CHHHHcceechhhccc-CC-
Confidence 45789999984 455 54 346799999999999986 333211 1 111 122 255699999964 31
Q ss_pred CCCcccCcccceEE-------EEEEEEecCeEEEEcCCCCChhhhhhccc-cCCCceEEEEEEEEEE
Q 008384 171 GSSHIYGLFSDTVV-------AYEIVLADGQVVRATKDNEYKDLFYAIPW-SQGTLGLLVSAEIKLI 229 (567)
Q Consensus 171 ~~s~~~G~~~d~V~-------~~evV~adG~vv~~s~~~~~~dLf~a~~g-s~G~lGiIt~~tl~l~ 229 (567)
..+|.+. .+++..++|+ .++.-+ |+|.+..- ....--+||++.|...
T Consensus 120 -------p~sD~~~~L~Al~A~v~l~~~~g~-R~vp~~----dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 120 -------AGAEMPFLMATLGATMYIASSAGV-RSVSAT----DFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp -------TTCHHHHHHHHTTCEEEEEETTEE-EEEEHH----HHEEETTEESCCTTCEEEEEEEECC
T ss_pred -------CcHHHHHHHHHcCcEEEEEcCCce-EEEEHH----HHhcCcccccCCCCCEEEEEEecCC
Confidence 1355554 6677777774 444332 65555432 2333468999988543
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=94.86 E-value=0.026 Score=57.22 Aligned_cols=116 Identities=11% Similarity=0.081 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHccC-------------Cc--eee--ecCC-CCccchhhhhc
Q 008384 104 ARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM-------------NL--SLA--VVAE-LDDLTVGGLIN 165 (567)
Q Consensus 104 ~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~~~-------------Gl--~~~--~~p~-~~~~tvGG~i~ 165 (567)
....+||++++..+-.|..+++.+++++++++.+|.+.+.++ .+ .+. ..+. -+..||||+++
T Consensus 51 ~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~ 130 (305)
T 3nvz_B 51 LFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNII 130 (305)
T ss_dssp CCSEEEECTTCGGGGCEEECSSEEEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHH
T ss_pred CCCEEEECCCChhhcceEECCCeEEEccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeC
Confidence 367899999744322223345679999999999999876532 01 010 1111 24569999996
Q ss_pred ccCCCCCCcccCcccceEE----EEEEEEecCeEEEEcCCCCChhhhhhcccc-CCCceEEEEEEEEEE
Q 008384 166 GYGIEGSSHIYGLFSDTVV----AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLI 229 (567)
Q Consensus 166 ~gg~g~~s~~~G~~~d~V~----~~evV~adG~vv~~s~~~~~~dLf~a~~gs-~G~lGiIt~~tl~l~ 229 (567)
+.. . .+.+.-.++ .+++..++|+ .+..-+ .|+|.+++-. ...--+||++.|...
T Consensus 131 ~a~-p-----~sD~~~~L~AldA~v~l~~~~G~-R~vp~~---~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 131 TAS-P-----ISDLNPVFMASGTKLTIVSRGTR-RTVPMD---HTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp HCC-T-----TCSSHHHHHHHTCEEEEEETTEE-EEEECC---GGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred CCC-C-----chHHHHHHHHcCCEEEEEcCCCc-EEEEee---hHhhcCcccccCCCCcEEEEEEecCC
Confidence 432 2 122222222 4667777784 333321 1455544322 223359999987543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=90.84 E-value=0.09 Score=53.00 Aligned_cols=147 Identities=11% Similarity=0.088 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHH-
Q 008384 63 DENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRA- 141 (567)
Q Consensus 63 ~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~- 141 (567)
|.++++++++.+++.. .......|++..... ..........+||++++..+-.|..+++.+++++++++.+|.+.
T Consensus 9 P~sl~ea~~ll~~~~~-~~a~~laGGT~l~~~---~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~~ 84 (296)
T 3hrd_C 9 PKTLEEAKGLLHQYKD-VPPAIIAGGTDLVIE---INDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQIENHP 84 (296)
T ss_dssp CSSHHHHHHHHHHTTT-SCCEEESSCTTHHHH---HHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHHHHHCH
T ss_pred CCCHHHHHHHHHhCCC-CCeEEEECCcHHHHH---hhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHHHHhCh
Confidence 4456777777776541 012233333332110 00011246789999985433223334568999999999999752
Q ss_pred -HccC--Cc-----eeeecCC-CCccchhhhhcccCCCCCCcccCcccce-----EE--EEEEEEecCeEEEEcCCCCCh
Q 008384 142 -TCPM--NL-----SLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDT-----VV--AYEIVLADGQVVRATKDNEYK 205 (567)
Q Consensus 142 -l~~~--Gl-----~~~~~p~-~~~~tvGG~i~~gg~g~~s~~~G~~~d~-----V~--~~evV~adG~vv~~s~~~~~~ 205 (567)
+.++ .+ .+. .+. -+..||||.+++ +.. .+|. .+ .+++..++|+ .+..-+
T Consensus 85 ~~~~~~p~L~~a~~~ia-s~qIRN~aTiGGNi~~-a~p--------~sD~~~~LlAldA~v~l~~~~g~-R~vp~~---- 149 (296)
T 3hrd_C 85 FIRSHVRALYKAASQVG-SPQIRNLGTIGGNLST-SSV--------AGDGVSAMTTLDATVVLESVRGT-RQMKLT---- 149 (296)
T ss_dssp HHHHHCHHHHHHHHTSS-CHHHHHHCBHHHHHHH-TCT--------TCHHHHHHHHTTCEEEEEETTEE-EEEEHH----
T ss_pred hhhhHhHHHHHHHHHhC-CHHHhcceehhhhhcc-CCC--------chHHHHHHHHhCcEEEEEcCCce-EEEEHH----
Confidence 1110 00 111 121 245699999964 322 2222 12 2344456663 333332
Q ss_pred hhhhhcc----ccCCCceEEEEEEEEE
Q 008384 206 DLFYAIP----WSQGTLGLLVSAEIKL 228 (567)
Q Consensus 206 dLf~a~~----gs~G~lGiIt~~tl~l 228 (567)
|+|.+.. .....--+||++.|-.
T Consensus 150 dF~~g~~~~~~t~L~~~Eil~~I~iP~ 176 (296)
T 3hrd_C 150 DFFDGEGFKRRNALEADEIMTEVIIDR 176 (296)
T ss_dssp HHHHCCSSSSSSSCCTTCEEEEEEEEC
T ss_pred HHhcccccccccCCCCCcEEEEEEecC
Confidence 6555442 1223335999998754
No 35
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=82.10 E-value=1.5 Score=52.92 Aligned_cols=75 Identities=1% Similarity=-0.059 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhcCCCCCceeeccCCCceeeccccCccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHH
Q 008384 63 DENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRAT 142 (567)
Q Consensus 63 ~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l 142 (567)
|.++++++++.++.. ......|+...... ..........+||++++..+-.|..+++.++++|+|++.+|.+.+
T Consensus 239 P~sl~ea~~ll~~~~---~a~lvaGgT~l~~~---~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~l~~~l 312 (1332)
T 3unc_A 239 ASTLKELLDLKAQHP---EAKLVVGNTEIGIE---MKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKTL 312 (1332)
T ss_dssp CCSHHHHHHHHHHCT---TCEECSSCTTHHHH---HHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHHHHHHH
T ss_pred cCCHHHHHHHHhhCC---CCEEEEeCcHHHHH---hhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHHHHHHH
Confidence 455666777666643 22223333322100 000012356799998854322233334679999999999999875
Q ss_pred c
Q 008384 143 C 143 (567)
Q Consensus 143 ~ 143 (567)
.
T Consensus 313 ~ 313 (1332)
T 3unc_A 313 L 313 (1332)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=69.19 E-value=0.68 Score=47.14 Aligned_cols=59 Identities=17% Similarity=0.102 Sum_probs=37.7
Q ss_pred CCeEEEEcCCC---CCceEEeCCCcEEEEcCCCcHHHHHHH--HccCC--c-----eeeecCC-CCccchhhhhc
Q 008384 104 ARHFEVDLSAF---RNILDIDKDRMIAKVEPLVNMGQISRA--TCPMN--L-----SLAVVAE-LDDLTVGGLIN 165 (567)
Q Consensus 104 ~~givIdls~l---~~il~id~~~~~v~VeaGv~~~~L~~~--l~~~G--l-----~~~~~p~-~~~~tvGG~i~ 165 (567)
....+||++++ +.| +.++ ++.++++++|++.+|.+. +.++= + .+ ..|. -+..||||.++
T Consensus 46 ~p~~lIdi~~i~eL~~I-~~~~-~~~l~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~i-as~qIRN~aTiGGNl~ 117 (324)
T 1rm6_B 46 HPAALVDLTGIDGLATI-STLA-DGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESV-AGPTHRAAATLGGNLC 117 (324)
T ss_dssp CCSEEEECTTSTTTTCE-EECT-TSCEEEETTCBHHHHHHCHHHHHHSHHHHHHHHHS-SCHHHHHHCBHHHHHT
T ss_pred CCCEEEECCCChhhcce-EECC-CCeEEEccCCcHHHHHhChHHHHHHHHHHHHHHHh-CCHHHcceeEeeeecc
Confidence 46789999876 554 5443 336999999999999874 21110 0 11 1222 24569999995
No 37
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=67.93 E-value=6.3 Score=43.13 Aligned_cols=99 Identities=13% Similarity=0.065 Sum_probs=61.1
Q ss_pred eEEEEEeeccccHHHHHHHHHHHhhcCCceeeeeEEecCCCCccCCCCCCCCCCcCCCCCCCCceeEEEEeecCCCCCCC
Q 008384 392 HVIQDMLVPLYKVGDALEWQHREVEVYPLWLCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILR 471 (567)
Q Consensus 392 ~viqDv~VP~~~l~e~l~~l~~~~~~~P~wlcp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~~~~~~ 471 (567)
.+..|++||+++++++ +.+.+.++.+.+- .+..-+. ..| .+-+|+-+-. +.
T Consensus 455 ~~~~Dvavp~~~l~~~-~~~~~~l~~~~~~--~~~~GH~----------------g~g-----~~H~~~~~~~--~~--- 505 (571)
T 1f0x_A 455 ILALDIALRRNDTEWY-EHLPPEIDSQLVH--KLYYGHF----------------MCY-----VFHQDYIVKK--GV--- 505 (571)
T ss_dssp EEEEEEECCTTCSCCS-CCCCHHHHTTEEE--EEEEEET----------------TTT-----EEEEEEEEET--TC---
T ss_pred ceEEEEEecHHHhHHH-HHHHHHHHhhCcc--ceeEEEE----------------cCC-----ceEEeeecCC--ch---
Confidence 4789999999999999 9999998876421 1111110 011 2344554421 11
Q ss_pred CCccchhHHHHHHHHHHHHcCCcccccccccCCHHHHHhhC-ChhHHHHHHHhCCCCCCC
Q 008384 472 GEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEKNFWRMF-DADLYEKCRKKYKAVGTF 530 (567)
Q Consensus 472 ~~~~~~~~~~r~lE~~v~~~gG~k~Lya~~y~t~~ef~~~y-~~~~y~~lr~kydp~~~f 530 (567)
+..+..+++=+.+.++||.-+ +++-.=.. | +...+.++|+.+||++.|
T Consensus 506 ----~~~~i~~~~~~~v~~~GGsis--aEHGvG~~-----~~~~~~m~~iK~~~DP~~il 554 (571)
T 1f0x_A 506 ----DVHALKEQMLELLQQRGAQYP--AEHNVGHL-----YKAPETLQKFYRENDPTNSM 554 (571)
T ss_dssp ----CHHHHHHHHHHHHHHTTCBSC--SSSCCTTT-----SCCCHHHHHHHHHHCTTCCB
T ss_pred ----hHHHHHHHHHHHHHHcCCeEE--eeccCCcc-----cCCHHHHHHHHHHhCCCCCC
Confidence 124678888899999999744 22211110 2 122399999999999755
No 38
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=57.03 E-value=15 Score=44.41 Aligned_cols=39 Identities=3% Similarity=0.045 Sum_probs=29.0
Q ss_pred CeEEEEcCCCCCceEEeCCCcEEEEcCCCcHHHHHHHHc
Q 008384 105 RHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC 143 (567)
Q Consensus 105 ~givIdls~l~~il~id~~~~~v~VeaGv~~~~L~~~l~ 143 (567)
-.++|++++...+-.+..++..++++++|++.++.+.|.
T Consensus 282 ~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~~~l~ 320 (1335)
T 3zyv_A 282 YPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKNVLS 320 (1335)
T ss_dssp CSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHHHHHH
T ss_pred CCeEEEcCcchhHheEEecCCEEEEcccCcHHHHHHHHH
Confidence 468899877444333445556799999999999988774
No 39
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=46.42 E-value=68 Score=34.20 Aligned_cols=55 Identities=5% Similarity=-0.051 Sum_probs=33.3
Q ss_pred hhHHHHHHHHHHHHc-----CCcccccccccCC----------------HHHHHhhC-C--hhHHHHHHHhCCCCCCCc
Q 008384 477 GAEAVRKMEQWLIEN-----GGFQPQYAVSELS----------------EKNFWRMF-D--ADLYEKCRKKYKAVGTFM 531 (567)
Q Consensus 477 ~~~~~r~lE~~v~~~-----gG~k~Lya~~y~t----------------~~ef~~~y-~--~~~y~~lr~kydp~~~f~ 531 (567)
..++.|++=+.+..+ +|.+-=|.+.-+. ...+.+.| . ...-.++|+||||++.|.
T Consensus 408 ~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK~~yDP~n~F~ 486 (495)
T 3fw9_A 408 FLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFN 486 (495)
T ss_dssp HHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHHHhhCcHhhCC
Confidence 367788877777654 3444334443221 12344455 3 257778899999998885
No 40
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=39.80 E-value=11 Score=25.33 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=15.7
Q ss_pred ccCCHHHHHhhCC--hhHHHHH
Q 008384 501 SELSEKNFWRMFD--ADLYEKC 520 (567)
Q Consensus 501 ~y~t~~ef~~~y~--~~~y~~l 520 (567)
.|++.+||.++|+ ++.|.+|
T Consensus 1 ~yLsd~dF~~vFgmsr~eF~~L 22 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQFAAL 22 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHHHHS
T ss_pred CCCCHHHHHHHHCcCHHHHHHC
Confidence 4889999999996 5688765
No 41
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=37.26 E-value=26 Score=37.42 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHH-c----CCcccccccccCCHHHHH-hhCCh--hHHHHHHHhCCCCCCCc
Q 008384 478 AEAVRKMEQWLIE-N----GGFQPQYAVSELSEKNFW-RMFDA--DLYEKCRKKYKAVGTFM 531 (567)
Q Consensus 478 ~~~~r~lE~~v~~-~----gG~k~Lya~~y~t~~ef~-~~y~~--~~y~~lr~kydp~~~f~ 531 (567)
.++.+++-+.+.+ . .|.+.=|++..+..+++. ..|+. ..-.++|+||||++.|.
T Consensus 410 ~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~ 471 (503)
T 1zr6_A 410 FEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFG 471 (503)
T ss_dssp HHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCCHHHHHHHHHGGGHHHHHHHHHHHCTTCTTC
T ss_pred HHHHHHHHHHHHhhCCCCCCceeccCCCcccccchHHHHHHHhHHHHHHHHHHHhCchhhcC
Confidence 3555554444443 2 245555777766644543 44543 57777999999999885
No 42
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=31.40 E-value=26 Score=37.47 Aligned_cols=24 Identities=8% Similarity=0.375 Sum_probs=18.0
Q ss_pred HHhhCCh---hHHHHHHHhCCCCCCCc
Q 008384 508 FWRMFDA---DLYEKCRKKYKAVGTFM 531 (567)
Q Consensus 508 f~~~y~~---~~y~~lr~kydp~~~f~ 531 (567)
+.+.|-+ .+-.++|+||||++.|.
T Consensus 468 w~~~Yyg~N~~RL~~vK~kyDP~n~F~ 494 (501)
T 3pop_A 468 WHHLYYKDNYARLRSAKRAWDPLNTFH 494 (501)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHhHhHHHHHHHHHHHhCcccccC
Confidence 5666633 56678899999998885
No 43
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=30.76 E-value=22 Score=38.40 Aligned_cols=25 Identities=4% Similarity=0.276 Sum_probs=17.8
Q ss_pred HHhhC-Ch--hHHHHHHHhCCCCCCCcc
Q 008384 508 FWRMF-DA--DLYEKCRKKYKAVGTFMS 532 (567)
Q Consensus 508 f~~~y-~~--~~y~~lr~kydp~~~f~~ 532 (567)
+.+.| +. ..-.++|+||||++.|..
T Consensus 494 ~~~~yyg~n~~RL~~iK~kyDP~nvF~~ 521 (530)
T 2y3s_A 494 WSELYYKDAYPRLQAVKARWDPRNVFRH 521 (530)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhcCC
Confidence 55454 32 567779999999988853
No 44
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=30.21 E-value=22 Score=38.25 Aligned_cols=25 Identities=12% Similarity=0.295 Sum_probs=17.9
Q ss_pred HHhhCCh---hHHHHHHHhCCCCCCCcc
Q 008384 508 FWRMFDA---DLYEKCRKKYKAVGTFMS 532 (567)
Q Consensus 508 f~~~y~~---~~y~~lr~kydp~~~f~~ 532 (567)
+.+.|-+ ..-.++|+||||++.|..
T Consensus 490 ~~~~yyg~n~~RL~~iK~kyDP~~vF~~ 517 (523)
T 2wdx_A 490 WHDLYYKGNHPRLRKVKAAYDPRNHFHH 517 (523)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHhhcCC
Confidence 5455532 567779999999988854
No 45
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=27.34 E-value=26 Score=37.66 Aligned_cols=25 Identities=8% Similarity=0.365 Sum_probs=17.8
Q ss_pred HHhhCCh---hHHHHHHHhCCCCCCCcc
Q 008384 508 FWRMFDA---DLYEKCRKKYKAVGTFMS 532 (567)
Q Consensus 508 f~~~y~~---~~y~~lr~kydp~~~f~~ 532 (567)
+.+.|-+ ..-.++|+||||++.|..
T Consensus 486 ~~~~y~g~n~~RL~~iK~kyDP~~vF~~ 513 (521)
T 2ipi_A 486 WYTLYYKGNYPRLQKVKARWDPRDVFRH 513 (521)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCCSCC
T ss_pred HHHhhhhhHHHHHHHHHHHhCCcCEecC
Confidence 5455432 577779999999988853
No 46
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=24.28 E-value=34 Score=26.24 Aligned_cols=20 Identities=30% Similarity=0.546 Sum_probs=16.5
Q ss_pred ccCCHHHHHhhCC--hhHHHHH
Q 008384 501 SELSEKNFWRMFD--ADLYEKC 520 (567)
Q Consensus 501 ~y~t~~ef~~~y~--~~~y~~l 520 (567)
.|+|.+||.++|+ ++.|.+|
T Consensus 32 ~yLsdedF~~vFgmsr~eF~~L 53 (68)
T 1qzp_A 32 RHLSAEDFSRVFAMSPEEFGKL 53 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHHHHS
T ss_pred hhCCHHHHHHHHCcCHHHHHHC
Confidence 7899999999996 5677765
No 47
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=20.37 E-value=4.1e+02 Score=28.23 Aligned_cols=55 Identities=13% Similarity=0.056 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHHHc-----CCcccccccccCC------------HHHHHhhCCh---hHHHHHHHhCCCCCCCc
Q 008384 477 GAEAVRKMEQWLIEN-----GGFQPQYAVSELS------------EKNFWRMFDA---DLYEKCRKKYKAVGTFM 531 (567)
Q Consensus 477 ~~~~~r~lE~~v~~~-----gG~k~Lya~~y~t------------~~ef~~~y~~---~~y~~lr~kydp~~~f~ 531 (567)
..++.|++=+.+... +|.+-=|.|.-+. ...+.+.|=+ ..-.++|+||||++.|.
T Consensus 431 ~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~ 505 (518)
T 3vte_A 431 HINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFR 505 (518)
T ss_dssp HHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchhccc
Confidence 467888877777653 3444334333222 1245555533 56678899999998884
Done!