Query 008386
Match_columns 567
No_of_seqs 80 out of 82
Neff 3.3
Searched_HMMs 13730
Date Tue Mar 26 00:59:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008386.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008386hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1o6wa1 b.72.1.1 (A:1-29) Spli 4.6 1.7E+02 0.012 18.9 1.7 16 214-229 9-24 (29)
2 d1ywia1 b.72.1.1 (A:15-42) Hun 4.3 1.7E+02 0.012 18.7 1.5 16 214-229 8-23 (28)
3 d1hr6a2 d.185.1.1 (A:234-470) 4.1 89 0.0065 26.9 -0.0 29 522-552 45-81 (237)
4 d1t56a2 a.121.1.1 (A:95-214) E 3.9 4.5E+02 0.033 20.5 4.3 39 74-113 4-45 (120)
5 d1jt6a2 a.121.1.1 (A:73-187) M 2.9 5.9E+02 0.043 19.7 4.1 26 395-420 24-50 (115)
6 d1sr9a1 a.5.7.1 (A:437-491) 2- 2.9 1.6E+02 0.012 21.2 0.4 12 119-130 9-20 (55)
7 d2acya_ d.58.10.1 (A:) Acylpho 2.7 4E+02 0.029 20.0 2.7 34 202-235 20-53 (98)
8 d1g2qa_ c.61.1.1 (A:) Adenine 2.7 2.2E+02 0.016 24.0 1.1 81 101-183 10-91 (178)
9 d1krha2 c.25.1.2 (A:206-338) B 2.6 62 0.0045 25.2 -2.5 23 524-549 9-31 (133)
10 d1oe8a1 a.45.1.1 (A:85-207) Cl 2.6 2.9E+02 0.021 20.8 1.6 16 402-417 105-122 (123)
No 1
>d1o6wa1 b.72.1.1 (A:1-29) Splicing factor prp40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.63 E-value=1.7e+02 Score=18.87 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=13.4
Q ss_pred ccCCceeEEecccCeE
Q 008386 214 HTPGQGYLYNCQTKEF 229 (567)
Q Consensus 214 ~~~gkGYLrNv~TgE~ 229 (567)
..+|+=|-+|.+|+|-
T Consensus 9 ~~~G~~YYyN~~T~eS 24 (29)
T d1o6wa1 9 DASGRIYYYNTLTKKS 24 (29)
T ss_dssp CTTCCEEEEETTTTEE
T ss_pred CCCCCEEEeECCCCCE
Confidence 4678999999999983
No 2
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.35 E-value=1.7e+02 Score=18.66 Aligned_cols=16 Identities=38% Similarity=0.654 Sum_probs=13.3
Q ss_pred ccCCceeEEecccCeE
Q 008386 214 HTPGQGYLYNCQTKEF 229 (567)
Q Consensus 214 ~~~gkGYLrNv~TgE~ 229 (567)
..+|+=|-+|.+|+|-
T Consensus 8 ~~~G~~YYyN~~T~eS 23 (28)
T d1ywia1 8 SPDGRTYYYNTETKQS 23 (28)
T ss_dssp ETTTEEEEEETTTTEE
T ss_pred CCCCCEEEeECCCCCE
Confidence 4578999999999983
No 3
>d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.12 E-value=89 Score=26.91 Aligned_cols=29 Identities=34% Similarity=0.434 Sum_probs=19.2
Q ss_pred HHHHHhcCCCc-------cchhhhhhhhhhhhcc-cccc
Q 008386 522 LLLWILGGASS-------EGLNSFLSMFRDVREQ-GQVF 552 (567)
Q Consensus 522 ~~~w~lg~~~~-------~~~~s~~~~frd~r~~-~~~~ 552 (567)
+|==||||..+ +|..| ..|+.+|+. |-+|
T Consensus 45 vl~~iLGG~~~~~~~~~g~G~sS--rL~~~lre~~gLay 81 (237)
T d1hr6a2 45 TLQTLLGGGGSFSAGGPGKGMYS--RLYTHVLNQYYFVE 81 (237)
T ss_dssp HHHHHHCEEESSCCSSTTSCTTS--HHHHHTTTTCSSEE
T ss_pred HHHHHhCCCcccccCCCCCCccc--HHHHHHHHhcCchh
Confidence 55567887543 56666 478999984 5454
No 4
>d1t56a2 a.121.1.1 (A:95-214) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=3.90 E-value=4.5e+02 Score=20.47 Aligned_cols=39 Identities=15% Similarity=0.264 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhhh
Q 008386 74 SAKEAFKSAIIHFGKKWYRRLSFVWRQAMQIL---RNFQKLWN 113 (567)
Q Consensus 74 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 113 (567)
++.+.+++++-.|...|.++.- +++.+.|.. ..|+++|+
T Consensus 4 d~~~~~r~~~~a~~~~~~~h~~-vm~a~~q~a~~~~e~~~~w~ 45 (120)
T d1t56a2 4 DRENMWRTGINVFFETFGSHKA-VTRAGQAARATSVEVAELWS 45 (120)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHTTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHhcCHHHHHHHH
Confidence 4566677777777776655532 334444433 23666665
No 5
>d1jt6a2 a.121.1.1 (A:73-187) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=2.89 E-value=5.9e+02 Score=19.66 Aligned_cols=26 Identities=12% Similarity=0.354 Sum_probs=15.7
Q ss_pred HHHHHHHHh-hcchhHHHHHHHHHHHH
Q 008386 395 QHLILYFWN-HFEVPALQRFIQNRRTQ 420 (567)
Q Consensus 395 qHsMLYF~h-hfELPAl~r~~~~r~~q 420 (567)
++++..||. .++-|.+...++..|.+
T Consensus 24 ~~a~~EF~~~~~~~~e~~~~i~~lr~~ 50 (115)
T d1jt6a2 24 QNAIIEFYTEYYKTNSINEKMNKLENK 50 (115)
T ss_dssp HHHHHHHHTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCHHHHHHHHHHHHH
Confidence 567777877 44556666555554443
No 6
>d1sr9a1 a.5.7.1 (A:437-491) 2-isopropylmalate synthase LeuA, communication domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=2.88 E-value=1.6e+02 Score=21.16 Aligned_cols=12 Identities=17% Similarity=0.470 Sum_probs=9.3
Q ss_pred cccCccchhhhh
Q 008386 119 LNLDVPKLMHLL 130 (567)
Q Consensus 119 ~~~~~~~~~~~~ 130 (567)
..+|+||+||+-
T Consensus 9 ~Gi~LPr~mq~e 20 (55)
T d1sr9a1 9 HGLSLPRRLQIE 20 (55)
T ss_dssp HCCCCCHHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 357899999873
No 7
>d2acya_ d.58.10.1 (A:) Acylphosphatase {Cow (Bos taurus) [TaxId: 9913]}
Probab=2.72 E-value=4e+02 Score=20.02 Aligned_cols=34 Identities=9% Similarity=-0.066 Sum_probs=23.4
Q ss_pred cCchHHHHhhhhccCCceeEEecccCeEEeeccc
Q 008386 202 VGYDTILMNSLLHTPGQGYLYNCQTKEFYNLSYA 235 (567)
Q Consensus 202 LGYDdILmNSLk~~~gkGYLrNv~TgE~YrLv~~ 235 (567)
+||-..+........=+||++|...|+..=...+
T Consensus 20 VGFR~~v~~~A~~l~L~G~V~N~~dG~Vei~~qG 53 (98)
T d2acya_ 20 VFFRKYTQAEGKKLGLVGWVQNTDQGTVQGQLQG 53 (98)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEE
T ss_pred cCchHHHHHHHHHcCCEEEEEECCCCeEEEEEEE
Confidence 4555555555555555999999999987766643
No 8
>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.65 E-value=2.2e+02 Score=24.04 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhhhhcccccccCccchhhhhh-hcccchhhHHHhhhcccCCCCceEEeccceeeccCcccccccCceEEE
Q 008386 101 AMQILRNFQKLWNIAGIHLNLDVPKLMHLLY-LDRIHSYAVQWLENRTKAFEPTYLYTMEKGYFLLPEADKSRHNIRTFN 179 (567)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~v~~~e~~~k~fEp~YeYSlEyGfLrLSe~aR~rhNIpt~~ 179 (567)
.++.++.+. =|-+.|| .+.|+-..++-.. ..++-...++-+.+..+..+..+.=+.|.|=+.|....-.++|+|...
T Consensus 10 ~~~~i~~~~-dfP~~Gi-~f~Di~~ll~dP~~~~~li~~l~~~l~~~~~~~~vD~Ivg~e~~Gi~la~~vA~~L~~p~v~ 87 (178)
T d1g2qa_ 10 LKLALHQYP-NFPSEGI-LFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVP 87 (178)
T ss_dssp HHHHCEEET-TCSSTTC-CEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCEEEE
T ss_pred HHHhccCCC-CCCCCCc-eEecChhhhcCHHHHHHHHHHHHHHHHhhhccCCCcEEEEeccccchhhHHHHHHhCCceee
Confidence 344444332 1456677 6778765554322 222333344455666667788899999998778888888899999888
Q ss_pred EEeC
Q 008386 180 ISIS 183 (567)
Q Consensus 180 VtLd 183 (567)
++-.
T Consensus 88 ~RK~ 91 (178)
T d1g2qa_ 88 VRKA 91 (178)
T ss_dssp EEET
T ss_pred eeec
Confidence 7765
No 9
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]}
Probab=2.62 E-value=62 Score=25.19 Aligned_cols=23 Identities=39% Similarity=0.840 Sum_probs=15.9
Q ss_pred HHHhcCCCccchhhhhhhhhhhhccc
Q 008386 524 LWILGGASSEGLNSFLSMFRDVREQG 549 (567)
Q Consensus 524 ~w~lg~~~~~~~~s~~~~frd~r~~~ 549 (567)
++|-||. |+.-|.||.|+.-+++
T Consensus 9 v~IAgG~---GItP~~s~l~~~~~~~ 31 (133)
T d1krha2 9 LMLAGGT---GIAPFLSMLQVLEQKG 31 (133)
T ss_dssp EEEEEGG---GHHHHHHHHHHHHHHC
T ss_pred EEEEccH---hHHHHHHHHHHHHHcC
Confidence 4555554 8888888888775544
No 10
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke (Schistosoma haematobium) [TaxId: 6185]}
Probab=2.58 E-value=2.9e+02 Score=20.82 Aligned_cols=16 Identities=19% Similarity=0.625 Sum_probs=11.7
Q ss_pred Hhh-cc-hhHHHHHHHHH
Q 008386 402 WNH-FE-VPALQRFIQNR 417 (567)
Q Consensus 402 ~hh-fE-LPAl~r~~~~r 417 (567)
+.| |+ +|.|..++.+|
T Consensus 105 ~~~v~~~~P~I~~yl~sR 122 (123)
T d1oe8a1 105 RENLLASSPRLAKYLSDR 122 (123)
T ss_dssp HHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHcChHHHHHHHcc
Confidence 345 44 89998888887
Done!