Query 008389
Match_columns 567
No_of_seqs 183 out of 1433
Neff 10.5
Searched_HMMs 46136
Date Thu Mar 28 23:12:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008389.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008389hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 3.5E-81 7.6E-86 627.6 47.1 513 15-561 11-535 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 4.1E-78 8.9E-83 601.8 46.7 492 24-558 13-522 (528)
3 KOG1177 Long chain fatty acid 100.0 6E-78 1.3E-82 561.0 43.6 523 17-565 47-594 (596)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 4.7E-76 1E-80 613.6 50.1 508 16-558 7-527 (534)
5 PTZ00237 acetyl-CoA synthetase 100.0 1.5E-72 3.3E-77 600.6 50.8 517 23-560 62-625 (647)
6 PLN02479 acetate-CoA ligase 100.0 1.1E-71 2.4E-76 589.0 54.5 564 4-567 4-567 (567)
7 PLN03102 acyl-activating enzym 100.0 2.7E-71 5.8E-76 586.2 52.5 538 15-560 9-556 (579)
8 COG1021 EntE Peptide arylation 100.0 3.8E-73 8.3E-78 516.9 32.8 506 16-560 24-540 (542)
9 PRK07788 acyl-CoA synthetase; 100.0 8.3E-72 1.8E-76 588.7 48.2 496 20-555 49-548 (549)
10 PLN02654 acetate-CoA ligase 100.0 4.7E-71 1E-75 591.2 51.5 520 20-559 87-641 (666)
11 TIGR02316 propion_prpE propion 100.0 7.5E-71 1.6E-75 588.4 52.9 520 20-560 51-606 (628)
12 PLN02860 o-succinylbenzoate-Co 100.0 1.3E-70 2.8E-75 580.3 48.7 532 16-566 3-562 (563)
13 PRK07529 AMP-binding domain pr 100.0 1.1E-69 2.4E-74 578.8 53.4 512 19-559 24-571 (632)
14 PLN02614 long-chain acyl-CoA s 100.0 1.1E-70 2.4E-75 587.1 43.0 517 20-559 45-650 (666)
15 PLN02736 long-chain acyl-CoA s 100.0 3.4E-70 7.3E-75 585.3 45.6 516 19-559 43-642 (651)
16 PRK13295 cyclohexanecarboxylat 100.0 5.6E-69 1.2E-73 566.6 53.0 507 13-559 17-545 (547)
17 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 2.9E-69 6.2E-74 577.2 51.4 510 23-559 60-603 (625)
18 PRK06334 long chain fatty acid 100.0 2.9E-69 6.3E-74 565.7 47.6 498 16-559 15-536 (539)
19 PRK00174 acetyl-CoA synthetase 100.0 7.6E-69 1.6E-73 574.8 51.2 510 23-559 70-611 (637)
20 PRK13382 acyl-CoA synthetase; 100.0 1.2E-68 2.7E-73 562.0 50.6 491 19-554 42-536 (537)
21 PRK08162 acyl-CoA synthetase; 100.0 5E-68 1.1E-72 560.0 54.5 539 7-562 5-543 (545)
22 PRK08314 long-chain-fatty-acid 100.0 2.3E-68 5E-73 563.0 51.9 516 15-559 5-543 (546)
23 PRK06839 acyl-CoA synthetase; 100.0 1.7E-68 3.7E-73 557.8 50.4 490 21-558 3-495 (496)
24 PRK05605 long-chain-fatty-acid 100.0 2.9E-68 6.3E-73 564.7 52.2 525 8-559 20-570 (573)
25 PRK04319 acetyl-CoA synthetase 100.0 1.1E-68 2.4E-73 566.8 48.4 504 20-558 42-559 (570)
26 PRK10524 prpE propionyl-CoA sy 100.0 2.7E-68 5.8E-73 570.2 51.6 517 23-560 56-607 (629)
27 PLN03052 acetate--CoA ligase; 100.0 3.6E-68 7.8E-73 569.8 52.4 519 20-567 174-728 (728)
28 PLN02574 4-coumarate--CoA liga 100.0 2.1E-68 4.6E-73 563.1 49.8 509 18-563 38-559 (560)
29 PRK06187 long-chain-fatty-acid 100.0 4E-68 8.7E-73 559.0 51.6 517 16-559 2-520 (521)
30 PRK07470 acyl-CoA synthetase; 100.0 4.4E-68 9.6E-73 558.2 50.9 515 17-564 4-524 (528)
31 PLN02861 long-chain-fatty-acid 100.0 5.2E-69 1.1E-73 574.8 44.4 516 20-559 43-647 (660)
32 TIGR01217 ac_ac_CoA_syn acetoa 100.0 4.3E-68 9.3E-73 567.5 51.0 501 32-560 96-628 (652)
33 PRK05677 long-chain-fatty-acid 100.0 7.3E-68 1.6E-72 559.6 51.3 512 20-560 24-559 (562)
34 PRK07656 long-chain-fatty-acid 100.0 9E-68 2E-72 555.0 51.3 504 19-554 4-512 (513)
35 PRK06155 crotonobetaine/carnit 100.0 7.4E-68 1.6E-72 556.3 50.3 507 13-559 14-525 (542)
36 PRK05857 acyl-CoA synthetase; 100.0 2.5E-68 5.4E-73 560.1 46.6 516 14-560 8-533 (540)
37 PLN02246 4-coumarate--CoA liga 100.0 1E-67 2.2E-72 556.2 50.9 504 19-558 22-536 (537)
38 PRK03640 O-succinylbenzoic aci 100.0 7.5E-68 1.6E-72 551.0 48.7 480 20-558 2-482 (483)
39 PRK07008 long-chain-fatty-acid 100.0 1.6E-67 3.5E-72 554.1 51.5 521 18-562 8-537 (539)
40 PRK03584 acetoacetyl-CoA synth 100.0 1.9E-67 4E-72 565.5 51.7 511 21-562 87-629 (655)
41 PRK09274 peptide synthase; Pro 100.0 8E-68 1.7E-72 559.1 46.0 510 18-559 4-549 (552)
42 PRK07786 long-chain-fatty-acid 100.0 2.6E-67 5.6E-72 553.4 49.7 510 19-565 16-531 (542)
43 PRK07638 acyl-CoA synthetase; 100.0 1.8E-67 3.8E-72 548.0 47.5 480 20-560 1-483 (487)
44 PTZ00342 acyl-CoA synthetase; 100.0 1.3E-67 2.8E-72 561.3 45.7 514 19-558 60-734 (746)
45 PRK08316 acyl-CoA synthetase; 100.0 1.1E-66 2.5E-71 548.0 52.0 507 19-559 10-520 (523)
46 PRK06018 putative acyl-CoA syn 100.0 1.7E-66 3.6E-71 547.2 52.0 521 17-559 7-535 (542)
47 PRK07769 long-chain-fatty-acid 100.0 2.4E-67 5.3E-72 562.6 45.9 507 18-561 19-617 (631)
48 PRK12583 acyl-CoA synthetase; 100.0 3E-66 6.5E-71 548.6 53.6 526 6-559 4-553 (558)
49 PRK06087 short chain acyl-CoA 100.0 1.3E-66 2.9E-71 549.2 50.2 512 14-560 17-538 (547)
50 PRK05852 acyl-CoA synthetase; 100.0 6.5E-67 1.4E-71 549.6 47.1 509 20-558 16-532 (534)
51 PRK05620 long-chain-fatty-acid 100.0 2.3E-66 5E-71 549.8 50.6 529 15-560 5-559 (576)
52 PRK08315 AMP-binding domain pr 100.0 3.5E-66 7.5E-71 548.0 51.6 525 14-565 10-558 (559)
53 PRK06145 acyl-CoA synthetase; 100.0 3.5E-66 7.7E-71 540.2 50.9 491 20-557 2-496 (497)
54 PRK06188 acyl-CoA synthetase; 100.0 4.8E-66 1E-70 542.3 51.3 509 17-561 9-520 (524)
55 PRK07867 acyl-CoA synthetase; 100.0 6.1E-66 1.3E-70 539.8 51.4 488 19-560 4-509 (529)
56 PRK06060 acyl-CoA synthetase; 100.0 1.1E-66 2.3E-71 563.8 47.1 477 21-556 5-490 (705)
57 PLN02330 4-coumarate--CoA liga 100.0 5.4E-66 1.2E-70 543.8 50.8 501 19-559 27-542 (546)
58 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 6.2E-66 1.3E-70 541.3 50.0 500 17-553 20-527 (527)
59 TIGR03098 ligase_PEP_1 acyl-Co 100.0 6.2E-66 1.4E-70 541.1 50.0 499 21-554 1-514 (515)
60 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 7.4E-66 1.6E-70 542.1 49.8 501 17-553 19-537 (538)
61 PLN02387 long-chain-fatty-acid 100.0 1E-66 2.3E-71 559.2 43.4 518 20-559 58-690 (696)
62 PLN02430 long-chain-fatty-acid 100.0 1.4E-66 3.1E-71 554.8 42.7 520 19-559 41-647 (660)
63 PRK07514 malonyl-CoA synthase; 100.0 4.2E-65 9.2E-70 533.2 51.4 496 19-559 2-502 (504)
64 PRK12476 putative fatty-acid-- 100.0 4.9E-66 1.1E-70 550.1 44.9 504 18-560 32-608 (612)
65 PRK08008 caiC putative crotono 100.0 3.1E-65 6.7E-70 535.5 49.8 499 20-553 7-517 (517)
66 PRK10946 entE enterobactin syn 100.0 5.1E-65 1.1E-69 534.8 50.7 505 16-560 21-534 (536)
67 PRK12492 long-chain-fatty-acid 100.0 4.3E-65 9.3E-70 538.5 49.8 507 20-555 24-561 (562)
68 PRK06164 acyl-CoA synthetase; 100.0 5.1E-65 1.1E-69 536.5 50.2 519 18-563 8-537 (540)
69 PRK13388 acyl-CoA synthetase; 100.0 4.6E-65 9.9E-70 534.9 49.5 488 19-559 2-507 (540)
70 PRK09088 acyl-CoA synthetase; 100.0 8.3E-65 1.8E-69 528.4 48.5 477 27-559 2-486 (488)
71 TIGR03443 alpha_am_amid L-amin 100.0 2.1E-65 4.5E-70 593.5 47.9 518 20-554 236-824 (1389)
72 PRK06710 long-chain-fatty-acid 100.0 2.2E-64 4.8E-69 533.9 51.4 514 20-561 24-558 (563)
73 PRK08043 bifunctional acyl-[ac 100.0 4.8E-65 1E-69 551.1 46.6 495 18-560 202-715 (718)
74 PRK06178 acyl-CoA synthetase; 100.0 3E-64 6.4E-69 533.4 51.7 518 19-559 32-566 (567)
75 PRK08279 long-chain-acyl-CoA s 100.0 1.6E-64 3.4E-69 538.4 49.0 507 16-563 33-569 (600)
76 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.4E-64 3E-69 529.0 47.0 490 21-557 1-501 (502)
77 PRK13383 acyl-CoA synthetase; 100.0 2.3E-64 4.9E-69 528.0 48.0 478 18-553 33-515 (516)
78 PRK08751 putative long-chain f 100.0 3.3E-64 7.1E-69 532.5 49.4 508 19-555 24-557 (560)
79 KOG1256 Long-chain acyl-CoA sy 100.0 2.9E-65 6.3E-70 507.5 38.5 519 18-559 73-681 (691)
80 KOG1175 Acyl-CoA synthetase [L 100.0 1.8E-65 4E-70 511.0 37.1 512 24-565 68-609 (626)
81 PRK05851 long-chain-fatty-acid 100.0 5.3E-65 1.2E-69 533.0 42.4 489 20-559 1-523 (525)
82 PRK07059 Long-chain-fatty-acid 100.0 6.1E-64 1.3E-68 529.8 50.6 508 19-555 22-555 (557)
83 TIGR03205 pimA dicarboxylate-- 100.0 1.1E-63 2.4E-68 526.0 51.8 510 18-553 19-541 (541)
84 COG1022 FAA1 Long-chain acyl-C 100.0 9.8E-65 2.1E-69 512.5 39.8 501 19-559 15-602 (613)
85 PRK08633 2-acyl-glycerophospho 100.0 2.3E-64 5E-69 577.6 47.8 514 19-559 614-1144(1146)
86 PRK12467 peptide synthase; Pro 100.0 7.2E-65 1.6E-69 625.2 43.9 488 19-558 3094-3594(3956)
87 PTZ00216 acyl-CoA synthetase; 100.0 3.2E-64 7E-69 541.5 42.9 510 19-559 68-692 (700)
88 PRK10252 entF enterobactin syn 100.0 5.8E-64 1.3E-68 579.7 47.3 493 15-555 453-964 (1296)
89 TIGR02262 benz_CoA_lig benzoat 100.0 4E-63 8.8E-68 518.1 48.6 495 23-554 7-507 (508)
90 PRK07798 acyl-CoA synthetase; 100.0 8.8E-63 1.9E-67 519.8 51.0 503 19-558 2-532 (533)
91 PRK08180 feruloyl-CoA synthase 100.0 1.7E-63 3.7E-68 530.4 42.1 496 16-559 35-597 (614)
92 PRK13390 acyl-CoA synthetase; 100.0 9.3E-63 2E-67 514.5 46.6 482 28-553 5-501 (501)
93 PRK04813 D-alanine--poly(phosp 100.0 1.4E-62 3E-67 514.5 47.2 491 20-557 2-502 (503)
94 PRK08974 long-chain-fatty-acid 100.0 5.5E-62 1.2E-66 515.2 52.0 512 19-559 22-556 (560)
95 PRK07787 acyl-CoA synthetase; 100.0 1.1E-62 2.5E-67 509.2 45.4 455 31-555 11-470 (471)
96 PRK12316 peptide synthase; Pro 100.0 2.2E-63 4.8E-68 621.3 46.7 482 19-556 510-1004(5163)
97 PRK12467 peptide synthase; Pro 100.0 2.1E-63 4.6E-68 612.2 45.2 501 10-556 502-1016(3956)
98 PLN03051 acyl-activating enzym 100.0 1.7E-62 3.8E-67 510.3 44.0 459 77-562 1-495 (499)
99 PRK12316 peptide synthase; Pro 100.0 2.5E-63 5.5E-68 620.8 44.9 488 19-556 2002-2502(5163)
100 PRK12406 long-chain-fatty-acid 100.0 1.9E-61 4.2E-66 505.6 49.9 491 37-561 3-506 (509)
101 PRK07445 O-succinylbenzoic aci 100.0 2.2E-62 4.8E-67 501.1 41.2 430 44-560 18-449 (452)
102 PRK05691 peptide synthase; Val 100.0 8.8E-63 1.9E-67 612.1 46.1 493 19-555 3719-4225(4334)
103 PRK09029 O-succinylbenzoic aci 100.0 4.3E-62 9.3E-67 503.3 43.1 450 22-560 4-455 (458)
104 PRK13391 acyl-CoA synthetase; 100.0 3E-61 6.5E-66 504.1 48.6 494 26-558 3-509 (511)
105 PRK07868 acyl-CoA synthetase; 100.0 2.8E-61 6.2E-66 533.2 48.0 491 17-556 444-956 (994)
106 PRK12582 acyl-CoA synthetase; 100.0 2.7E-61 5.9E-66 514.5 44.9 497 19-559 48-608 (624)
107 PRK08276 long-chain-fatty-acid 100.0 8.7E-61 1.9E-65 500.0 46.7 484 37-559 3-497 (502)
108 PRK05691 peptide synthase; Val 100.0 1.2E-61 2.6E-66 602.0 47.1 491 10-555 1121-1625(4334)
109 PRK06814 acylglycerophosphoeth 100.0 1.9E-60 4.1E-65 542.8 51.2 498 19-563 630-1137(1140)
110 PRK05850 acyl-CoA synthetase; 100.0 9.5E-61 2.1E-65 507.8 44.2 508 20-565 1-575 (578)
111 KOG1180 Acyl-CoA synthetase [L 100.0 1.7E-61 3.6E-66 458.6 29.8 519 19-559 40-670 (678)
112 PRK09192 acyl-CoA synthetase; 100.0 8.4E-60 1.8E-64 499.7 44.3 500 20-562 21-570 (579)
113 TIGR01923 menE O-succinylbenzo 100.0 5.5E-60 1.2E-64 485.4 40.2 435 47-552 1-436 (436)
114 PRK07768 long-chain-fatty-acid 100.0 3E-58 6.6E-63 485.4 43.9 494 21-557 3-544 (545)
115 PRK08308 acyl-CoA synthetase; 100.0 9.4E-58 2E-62 464.2 41.9 406 38-553 1-408 (414)
116 PF00501 AMP-binding: AMP-bind 100.0 9.4E-57 2E-61 458.7 27.0 400 26-459 1-417 (417)
117 KOG1179 Very long-chain acyl-C 100.0 8.1E-54 1.8E-58 408.2 39.7 499 18-556 75-611 (649)
118 TIGR01733 AA-adenyl-dom amino 100.0 2.1E-51 4.5E-56 418.3 36.5 393 47-483 1-408 (408)
119 PTZ00297 pantothenate kinase; 100.0 2.3E-47 5E-52 421.4 39.8 480 20-559 427-996 (1452)
120 PRK07824 O-succinylbenzoic aci 100.0 4.1E-47 8.9E-52 378.6 33.1 319 193-558 33-357 (358)
121 COG1020 EntF Non-ribosomal pep 100.0 2.5E-38 5.5E-43 340.1 36.5 409 19-476 226-642 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 1.6E-38 3.4E-43 314.4 28.8 287 195-548 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 2.8E-37 6.1E-42 313.8 27.2 325 193-550 73-418 (422)
124 KOG3628 Predicted AMP-binding 100.0 2.3E-32 5E-37 277.8 37.7 512 20-561 770-1354(1363)
125 KOG1178 Non-ribosomal peptide 100.0 2.2E-32 4.8E-37 287.3 22.0 505 21-566 37-587 (1032)
126 TIGR03335 F390_ftsA coenzyme F 100.0 2.4E-30 5.3E-35 262.8 27.5 321 192-549 83-440 (445)
127 COG1541 PaaK Coenzyme F390 syn 100.0 2.1E-28 4.6E-33 234.7 26.7 323 192-549 87-430 (438)
128 TIGR03089 conserved hypothetic 99.9 8.4E-26 1.8E-30 206.9 21.9 218 26-285 2-227 (227)
129 KOG3628 Predicted AMP-binding 99.9 4.7E-21 1E-25 196.2 25.0 502 22-564 96-710 (1363)
130 PRK09188 serine/threonine prot 99.9 3.3E-21 7.2E-26 186.4 13.1 117 426-556 205-326 (365)
131 TIGR02304 aden_form_hyp probab 99.8 3.6E-17 7.7E-22 162.3 25.1 253 197-501 101-377 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.2 1.8E-11 4E-16 90.2 6.1 69 467-546 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.9 7E-08 1.5E-12 94.1 18.1 226 194-454 88-350 (365)
134 PF03321 GH3: GH3 auxin-respon 98.6 4.9E-08 1.1E-12 100.9 5.6 88 401-504 356-452 (528)
135 PF14535 AMP-binding_C_2: AMP- 97.9 2.6E-05 5.7E-10 60.5 6.2 85 460-549 1-91 (96)
136 PLN02249 indole-3-acetic acid- 97.9 0.00028 6.1E-09 73.5 14.6 43 432-474 410-456 (597)
137 PLN02247 indole-3-acetic acid- 97.8 0.003 6.5E-08 65.4 19.9 44 432-475 417-464 (606)
138 PLN02620 indole-3-acetic acid- 97.3 0.0071 1.5E-07 62.6 15.7 44 432-475 423-470 (612)
139 COG1541 PaaK Coenzyme F390 syn 95.7 0.067 1.4E-06 53.1 9.6 94 44-138 108-203 (438)
140 TIGR03335 F390_ftsA coenzyme F 87.6 4.2 9E-05 41.8 10.2 83 44-129 104-188 (445)
141 TIGR02155 PA_CoA_ligase phenyl 87.5 3.9 8.6E-05 41.6 10.0 89 44-133 93-183 (422)
142 TIGR03089 conserved hypothetic 80.3 9.9 0.00021 34.9 8.3 77 33-118 148-226 (227)
143 PRK07656 long-chain-fatty-acid 76.1 18 0.00038 37.8 10.0 96 33-132 164-270 (513)
144 KOG1177 Long chain fatty acid 72.6 31 0.00066 34.9 9.5 95 33-130 232-337 (596)
145 PRK06334 long chain fatty acid 70.8 36 0.00077 36.0 10.7 97 33-132 181-288 (539)
146 PRK08315 AMP-binding domain pr 68.6 41 0.0009 35.6 10.8 83 44-129 217-301 (559)
147 COG0399 WecE Predicted pyridox 67.6 16 0.00036 36.1 6.7 65 55-123 59-128 (374)
148 PF00501 AMP-binding: AMP-bind 65.8 69 0.0015 32.2 11.4 88 193-289 8-99 (417)
149 PRK12583 acyl-CoA synthetase; 65.5 49 0.0011 35.0 10.5 82 44-128 219-302 (558)
150 PLN02736 long-chain acyl-CoA s 64.6 75 0.0016 34.5 11.9 87 213-300 77-167 (651)
151 PRK06187 long-chain-fatty-acid 63.6 39 0.00085 35.3 9.3 85 44-132 185-270 (521)
152 PRK04319 acetyl-CoA synthetase 60.6 61 0.0013 34.5 10.2 97 33-132 203-310 (570)
153 TIGR01733 AA-adenyl-dom amino 59.3 75 0.0016 31.8 10.2 98 34-134 119-228 (408)
154 PRK02261 methylaspartate mutas 58.0 56 0.0012 27.1 7.3 101 237-343 5-119 (137)
155 PTZ00237 acetyl-CoA synthetase 57.5 1.3E+02 0.0028 32.8 12.1 79 212-291 90-172 (647)
156 TIGR01923 menE O-succinylbenzo 57.4 59 0.0013 33.0 9.2 82 44-131 129-211 (436)
157 PLN02565 cysteine synthase 57.2 1.4E+02 0.003 29.1 11.0 89 36-126 31-122 (322)
158 KOG1176 Acyl-CoA synthetase [L 57.2 58 0.0013 34.2 8.8 88 212-300 43-136 (537)
159 PLN03052 acetate--CoA ligase; 57.0 1.4E+02 0.003 33.1 12.3 98 194-293 189-290 (728)
160 TIGR03098 ligase_PEP_1 acyl-Co 55.8 64 0.0014 33.6 9.3 85 44-132 179-264 (515)
161 PRK11761 cysM cysteine synthas 55.7 1.4E+02 0.003 28.6 10.7 87 36-125 28-117 (296)
162 PLN03051 acyl-activating enzym 55.1 58 0.0013 34.0 8.7 95 34-131 118-222 (499)
163 PRK08308 acyl-CoA synthetase; 54.7 1.1E+02 0.0025 30.7 10.6 96 33-132 99-205 (414)
164 TIGR03590 PseG pseudaminic aci 53.6 1.6E+02 0.0035 27.9 10.7 98 44-157 10-112 (279)
165 PRK09274 peptide synthase; Pro 53.6 1.1E+02 0.0024 32.2 10.8 80 211-291 38-121 (552)
166 PF09580 Spore_YhcN_YlaJ: Spor 52.8 60 0.0013 28.3 7.1 57 464-527 76-132 (177)
167 PF01041 DegT_DnrJ_EryC1: DegT 52.6 26 0.00056 34.8 5.4 81 30-124 35-120 (363)
168 PLN02860 o-succinylbenzoate-Co 52.4 99 0.0021 32.8 10.1 97 33-133 170-276 (563)
169 PLN02654 acetate-CoA ligase 52.0 1.5E+02 0.0031 32.5 11.4 81 212-293 118-202 (666)
170 PRK08314 long-chain-fatty-acid 51.8 1E+02 0.0023 32.4 10.2 94 33-130 188-292 (546)
171 cd01445 TST_Repeats Thiosulfat 51.5 43 0.00094 27.8 5.7 43 56-98 81-126 (138)
172 TIGR02898 spore_YhcN_YlaJ spor 51.1 85 0.0018 26.8 7.3 58 465-527 56-113 (158)
173 PLN02387 long-chain-fatty-acid 50.6 98 0.0021 34.0 9.8 87 212-300 104-195 (696)
174 COG0031 CysK Cysteine synthase 50.3 2.4E+02 0.0051 27.1 11.1 68 57-125 44-116 (300)
175 COG1167 ARO8 Transcriptional r 50.1 3.1E+02 0.0067 28.3 14.3 59 67-126 176-235 (459)
176 PRK03640 O-succinylbenzoic aci 49.3 1.4E+02 0.0029 30.8 10.4 96 33-132 139-244 (483)
177 PRK08316 acyl-CoA synthetase; 49.1 1.6E+02 0.0035 30.6 11.1 85 213-298 35-123 (523)
178 PRK07788 acyl-CoA synthetase; 48.9 1.3E+02 0.0027 31.8 10.2 84 214-298 74-161 (549)
179 KOG0023 Alcohol dehydrogenase, 48.7 1E+02 0.0022 29.7 7.9 76 61-139 173-248 (360)
180 TIGR02188 Ac_CoA_lig_AcsA acet 48.6 1.9E+02 0.0042 31.1 11.7 96 193-292 70-169 (625)
181 PRK06164 acyl-CoA synthetase; 48.5 1.2E+02 0.0027 31.8 10.1 95 34-132 180-284 (540)
182 PRK06155 crotonobetaine/carnit 47.4 1.4E+02 0.003 31.5 10.2 85 214-299 46-134 (542)
183 PRK06188 acyl-CoA synthetase; 47.2 1.5E+02 0.0032 31.1 10.4 84 44-131 186-269 (524)
184 TIGR01217 ac_ac_CoA_syn acetoa 47.1 2E+02 0.0044 31.2 11.6 79 213-292 113-195 (652)
185 PLN02556 cysteine synthase/L-3 47.1 2.2E+02 0.0048 28.4 10.7 60 66-125 106-165 (368)
186 TIGR02379 ECA_wecE TDP-4-keto- 46.7 63 0.0014 32.3 7.0 58 62-123 63-125 (376)
187 PRK03584 acetoacetyl-CoA synth 46.6 2.2E+02 0.0049 30.9 11.9 80 212-292 112-195 (655)
188 PRK00174 acetyl-CoA synthetase 46.2 2.1E+02 0.0046 30.9 11.6 80 212-292 96-179 (637)
189 PLN03102 acyl-activating enzym 46.0 1.2E+02 0.0026 32.4 9.5 82 214-296 39-124 (579)
190 COG1022 FAA1 Long-chain acyl-C 45.2 1.9E+02 0.0041 31.0 10.4 101 31-135 187-297 (613)
191 PRK07529 AMP-binding domain pr 45.2 1.6E+02 0.0034 31.9 10.3 95 194-291 39-137 (632)
192 PRK07638 acyl-CoA synthetase; 45.2 1.3E+02 0.0028 31.1 9.5 85 44-132 161-246 (487)
193 TIGR02316 propion_prpE propion 44.1 2.3E+02 0.0051 30.5 11.5 78 213-291 82-163 (628)
194 KOG1250 Threonine/serine dehyd 44.0 3.4E+02 0.0074 27.1 14.4 72 55-129 101-172 (457)
195 TIGR01139 cysK cysteine syntha 43.8 2.8E+02 0.0062 26.5 10.9 90 35-127 21-113 (298)
196 PRK08043 bifunctional acyl-[ac 43.5 1.6E+02 0.0034 32.5 10.2 92 33-127 363-465 (718)
197 PRK13295 cyclohexanecarboxylat 43.2 2.2E+02 0.0049 30.0 11.0 81 211-292 52-136 (547)
198 COG0436 Aspartate/tyrosine/aro 43.0 3.6E+02 0.0079 27.1 14.1 67 56-124 72-141 (393)
199 TIGR02372 4_coum_CoA_lig 4-cou 43.0 3.6E+02 0.0078 27.0 12.5 107 19-131 79-198 (386)
200 PLN02246 4-coumarate--CoA liga 42.9 1.5E+02 0.0032 31.2 9.6 84 213-297 49-136 (537)
201 TIGR02262 benz_CoA_lig benzoat 42.8 1.7E+02 0.0037 30.4 10.0 95 33-129 159-264 (508)
202 PRK11706 TDP-4-oxo-6-deoxy-D-g 42.4 87 0.0019 31.2 7.3 56 64-123 65-125 (375)
203 TIGR00936 ahcY adenosylhomocys 42.4 3.4E+02 0.0074 27.4 11.2 64 67-130 29-94 (406)
204 PLN02550 threonine dehydratase 42.3 4.3E+02 0.0094 28.2 12.4 101 28-133 117-219 (591)
205 PRK10877 protein disulfide iso 41.8 2.5E+02 0.0055 25.8 9.6 48 435-487 55-105 (232)
206 PRK05857 acyl-CoA synthetase; 41.7 2E+02 0.0044 30.3 10.4 80 213-293 40-123 (540)
207 PRK08633 2-acyl-glycerophospho 41.7 1.8E+02 0.0039 34.1 10.9 97 32-131 779-886 (1146)
208 PLN03013 cysteine synthase 41.3 3.2E+02 0.0069 27.8 10.8 81 44-126 149-230 (429)
209 PLN02330 4-coumarate--CoA liga 41.0 2.1E+02 0.0046 30.1 10.4 84 213-297 54-141 (546)
210 cd06448 L-Ser-dehyd Serine deh 40.1 1.6E+02 0.0035 28.5 8.5 88 36-126 17-106 (316)
211 PRK11493 sseA 3-mercaptopyruva 40.0 54 0.0012 31.2 5.2 55 44-98 200-259 (281)
212 PTZ00342 acyl-CoA synthetase; 39.9 1.8E+02 0.0039 32.3 9.7 99 213-318 90-207 (746)
213 PRK10524 prpE propionyl-CoA sy 39.8 3E+02 0.0065 29.7 11.5 79 212-291 82-164 (629)
214 cd01449 TST_Repeat_2 Thiosulfa 39.6 70 0.0015 25.4 5.1 41 56-96 64-104 (118)
215 PRK08162 acyl-CoA synthetase; 39.5 1.7E+02 0.0036 30.8 9.4 83 214-297 43-129 (545)
216 PRK07514 malonyl-CoA synthase; 39.3 2.1E+02 0.0047 29.6 10.1 84 213-297 27-114 (504)
217 PRK06381 threonine synthase; V 39.1 3.2E+02 0.007 26.4 10.5 105 19-129 14-121 (319)
218 COG1171 IlvA Threonine dehydra 38.8 2.5E+02 0.0054 27.6 9.2 116 20-139 25-142 (347)
219 cd01561 CBS_like CBS_like: Thi 38.6 3.5E+02 0.0077 25.7 10.9 65 62-127 44-109 (291)
220 PRK07787 acyl-CoA synthetase; 38.6 2.3E+02 0.0051 29.1 10.1 95 33-132 126-231 (471)
221 PRK13388 acyl-CoA synthetase; 38.3 3.6E+02 0.0077 28.4 11.6 83 214-297 26-113 (540)
222 COG2236 Predicted phosphoribos 38.1 50 0.0011 29.2 4.1 35 44-78 5-39 (192)
223 PLN02861 long-chain-fatty-acid 38.0 2.3E+02 0.0051 30.8 10.3 85 213-298 76-164 (660)
224 PRK05605 long-chain-fatty-acid 37.8 2E+02 0.0042 30.6 9.6 83 214-297 57-143 (573)
225 TIGR01136 cysKM cysteine synth 37.6 3.8E+02 0.0081 25.7 11.1 88 36-126 23-113 (299)
226 PRK10946 entE enterobactin syn 37.2 1.9E+02 0.0041 30.4 9.3 96 33-132 180-287 (536)
227 PRK10717 cysteine synthase A; 37.0 3.9E+02 0.0084 26.1 10.7 62 64-126 57-119 (330)
228 PRK08276 long-chain-fatty-acid 36.9 2.5E+02 0.0055 29.0 10.2 83 214-297 11-97 (502)
229 PRK10252 entF enterobactin syn 36.8 2.1E+02 0.0045 34.2 10.5 96 33-131 596-703 (1296)
230 PRK13383 acyl-CoA synthetase; 36.6 2.2E+02 0.0048 29.7 9.7 84 214-298 60-147 (516)
231 PRK08008 caiC putative crotono 36.3 3.6E+02 0.0079 28.0 11.3 83 214-297 37-123 (517)
232 PLN02614 long-chain acyl-CoA s 36.3 2.6E+02 0.0056 30.6 10.3 84 213-298 78-166 (666)
233 PLN00011 cysteine synthase 36.1 2.4E+02 0.0051 27.5 9.0 65 61-126 58-124 (323)
234 TIGR02275 DHB_AMP_lig 2,3-dihy 36.1 2.5E+02 0.0055 29.4 10.0 96 32-131 180-287 (527)
235 PRK13391 acyl-CoA synthetase; 36.0 3.5E+02 0.0077 28.1 11.1 82 214-296 24-109 (511)
236 PRK10696 tRNA 2-thiocytidine b 35.9 3.6E+02 0.0077 25.2 9.9 72 55-126 13-96 (258)
237 cd00640 Trp-synth-beta_II Tryp 35.9 3.5E+02 0.0076 24.8 10.5 92 35-129 15-108 (244)
238 PRK06702 O-acetylhomoserine am 35.6 3.6E+02 0.0078 27.6 10.4 56 67-124 97-154 (432)
239 PRK11658 UDP-4-amino-4-deoxy-L 35.6 1.5E+02 0.0033 29.6 7.8 63 56-122 59-126 (379)
240 PRK05852 acyl-CoA synthetase; 35.1 2.6E+02 0.0055 29.4 9.9 86 44-132 194-282 (534)
241 PRK05620 long-chain-fatty-acid 34.8 2.9E+02 0.0062 29.4 10.3 98 33-131 179-286 (576)
242 PRK07798 acyl-CoA synthetase; 34.7 4.1E+02 0.0088 27.7 11.4 84 213-298 27-115 (533)
243 PRK07470 acyl-CoA synthetase; 34.4 3.1E+02 0.0066 28.7 10.4 98 33-131 161-268 (528)
244 PRK08279 long-chain-acyl-CoA s 34.4 2.5E+02 0.0054 30.0 9.8 83 214-297 62-148 (600)
245 PRK06839 acyl-CoA synthetase; 34.1 3E+02 0.0064 28.4 10.1 86 212-298 25-115 (496)
246 COG0365 Acs Acyl-coenzyme A sy 33.9 2.7E+02 0.0059 29.3 9.3 97 197-298 26-127 (528)
247 PRK09088 acyl-CoA synthetase; 33.5 4.1E+02 0.0089 27.3 11.1 78 214-292 22-103 (488)
248 PRK12406 long-chain-fatty-acid 33.4 2.5E+02 0.0055 29.1 9.5 84 214-298 11-98 (509)
249 cd01519 RHOD_HSP67B2 Member of 33.4 91 0.002 24.0 4.7 53 44-96 36-92 (106)
250 PRK08751 putative long-chain f 33.4 2.4E+02 0.0053 29.7 9.5 83 214-297 50-137 (560)
251 TIGR01138 cysM cysteine syntha 33.0 4.4E+02 0.0095 25.1 10.9 88 35-125 23-113 (290)
252 PRK15407 lipopolysaccharide bi 33.0 4.4E+02 0.0094 27.0 10.7 55 66-124 107-166 (438)
253 PRK06178 acyl-CoA synthetase; 32.9 2.8E+02 0.0061 29.3 9.9 84 214-298 58-145 (567)
254 PRK07059 Long-chain-fatty-acid 32.9 2.5E+02 0.0053 29.7 9.4 83 213-296 47-133 (557)
255 COG0318 CaiC Acyl-CoA syntheta 32.5 3.9E+02 0.0085 28.1 10.7 97 33-130 169-277 (534)
256 KOG1179 Very long-chain acyl-C 32.5 1.7E+02 0.0037 30.6 7.3 79 44-126 260-340 (649)
257 TIGR03588 PseC UDP-4-keto-6-de 32.4 1.9E+02 0.0041 28.8 8.0 65 56-123 55-127 (380)
258 PRK05850 acyl-CoA synthetase; 32.1 6E+02 0.013 26.9 12.2 83 213-297 34-123 (578)
259 PRK13237 tyrosine phenol-lyase 31.6 5.5E+02 0.012 26.5 10.8 49 64-117 111-174 (460)
260 PF08967 DUF1884: Domain of un 30.8 2.2E+02 0.0048 21.0 6.0 67 50-132 9-75 (85)
261 PRK07476 eutB threonine dehydr 30.7 3.8E+02 0.0081 26.1 9.4 55 78-132 74-128 (322)
262 PRK05973 replicative DNA helic 30.5 1.9E+02 0.0041 26.7 6.8 106 1-117 1-115 (237)
263 TIGR01734 D-ala-DACP-lig D-ala 30.3 3.2E+02 0.0068 28.3 9.6 84 44-130 159-245 (502)
264 PRK06814 acylglycerophosphoeth 30.3 3.9E+02 0.0085 31.4 11.2 96 33-131 791-897 (1140)
265 PLN02430 long-chain-fatty-acid 30.3 6.9E+02 0.015 27.2 12.4 83 213-297 75-162 (660)
266 PRK09224 threonine dehydratase 30.2 4.4E+02 0.0094 27.6 10.2 96 34-134 34-131 (504)
267 COG1064 AdhP Zn-dependent alco 30.1 2.4E+02 0.0053 27.6 7.7 60 62-125 159-218 (339)
268 PLN02723 3-mercaptopyruvate su 29.9 1.2E+02 0.0025 29.6 5.7 55 45-99 238-298 (320)
269 PRK05939 hypothetical protein; 29.1 5.2E+02 0.011 26.0 10.4 56 67-124 83-138 (397)
270 PF00818 Ice_nucleation: Ice n 29.0 29 0.00063 16.6 0.6 9 340-348 1-9 (16)
271 PRK13382 acyl-CoA synthetase; 28.5 3.8E+02 0.0081 28.2 9.8 82 214-296 68-153 (537)
272 cd01563 Thr-synth_1 Threonine 28.2 3.1E+02 0.0067 26.6 8.4 90 35-130 38-129 (324)
273 PF01276 OKR_DC_1: Orn/Lys/Arg 28.2 2.3E+02 0.0049 28.7 7.4 116 21-157 67-205 (417)
274 PRK06087 short chain acyl-CoA 28.1 2.8E+02 0.0062 29.1 8.9 76 214-290 49-128 (547)
275 PRK05677 long-chain-fatty-acid 28.0 3.3E+02 0.0071 28.9 9.3 81 214-295 49-134 (562)
276 PRK09509 fieF ferrous iron eff 27.7 2.4E+02 0.0052 27.0 7.4 63 465-527 215-277 (299)
277 PF09269 DUF1967: Domain of un 27.6 74 0.0016 22.7 2.9 31 45-75 32-62 (69)
278 PRK06382 threonine dehydratase 27.4 4.2E+02 0.0091 26.8 9.4 54 77-130 79-132 (406)
279 PRK07786 long-chain-fatty-acid 27.3 3.8E+02 0.0083 28.1 9.7 82 214-296 42-127 (542)
280 TIGR03208 cyc_hxne_CoA_lg cycl 27.1 5.7E+02 0.012 26.8 10.9 79 213-292 52-134 (538)
281 PRK12476 putative fatty-acid-- 26.5 8.2E+02 0.018 26.2 12.6 85 212-297 66-156 (612)
282 TIGR02370 pyl_corrinoid methyl 26.4 4.6E+02 0.01 23.3 9.9 110 218-330 62-185 (197)
283 PF02729 OTCace_N: Aspartate/o 26.2 3.9E+02 0.0084 22.3 11.9 86 50-136 16-113 (142)
284 PF00291 PALP: Pyridoxal-phosp 25.9 4.9E+02 0.011 24.7 9.4 57 69-126 55-111 (306)
285 TIGR03443 alpha_am_amid L-amin 25.8 4.5E+02 0.0097 31.8 10.8 98 193-291 249-350 (1389)
286 cd00754 MoaD Ubiquitin domain 25.8 1.3E+02 0.0029 21.7 4.2 46 19-79 25-77 (80)
287 TIGR03595 Obg_CgtA_exten Obg f 25.8 81 0.0017 22.5 2.8 20 57-76 44-63 (69)
288 COG4009 Uncharacterized protei 25.7 2.2E+02 0.0048 20.8 4.8 66 44-120 8-76 (88)
289 PRK12582 acyl-CoA synthetase; 25.7 3.2E+02 0.0069 29.5 8.8 78 213-291 79-165 (624)
290 TIGR01124 ilvA_2Cterm threonin 25.4 6.3E+02 0.014 26.4 10.4 54 77-130 71-124 (499)
291 TIGR02035 D_Ser_am_lyase D-ser 25.3 4.8E+02 0.01 26.7 9.2 62 74-135 155-216 (431)
292 TIGR01137 cysta_beta cystathio 25.2 4.1E+02 0.0089 27.2 9.1 87 36-125 27-116 (454)
293 cd01562 Thr-dehyd Threonine de 25.2 4.2E+02 0.009 25.3 8.7 60 70-130 65-124 (304)
294 cd07050 BMC_EutL_repeat2 ethan 25.2 1.5E+02 0.0032 21.8 3.9 42 59-100 3-45 (87)
295 PLN02356 phosphateglycerate ki 25.1 4.7E+02 0.01 26.6 9.0 64 61-125 94-158 (423)
296 PRK09192 acyl-CoA synthetase; 25.1 5E+02 0.011 27.6 10.1 86 212-298 47-143 (579)
297 COG1021 EntE Peptide arylation 25.1 3.1E+02 0.0067 27.5 7.3 107 215-327 54-169 (542)
298 PF00464 SHMT: Serine hydroxym 24.9 7.3E+02 0.016 25.0 11.0 24 104-127 156-179 (399)
299 PLN02479 acetate-CoA ligase 24.8 4.7E+02 0.01 27.7 9.8 81 214-295 45-129 (567)
300 PRK02261 methylaspartate mutas 24.8 4E+02 0.0087 22.0 10.0 59 81-139 18-79 (137)
301 TIGR01127 ilvA_1Cterm threonin 24.7 5.1E+02 0.011 25.8 9.4 92 35-131 15-108 (380)
302 PLN02574 4-coumarate--CoA liga 24.7 4.4E+02 0.0096 27.8 9.6 84 214-298 66-154 (560)
303 PRK02289 4-oxalocrotonate taut 24.6 2E+02 0.0044 19.6 4.6 49 495-543 2-50 (60)
304 PRK12492 long-chain-fatty-acid 24.3 3.7E+02 0.008 28.4 8.9 80 213-294 48-133 (562)
305 PRK12483 threonine dehydratase 24.3 5.6E+02 0.012 27.0 9.7 62 75-136 89-150 (521)
306 PRK09162 hypoxanthine-guanine 24.3 2E+02 0.0044 25.1 5.7 46 43-89 14-59 (181)
307 PRK10595 SOS cell division inh 24.3 3.1E+02 0.0068 23.5 6.5 37 59-95 70-106 (164)
308 PRK05851 long-chain-fatty-acid 24.3 4.2E+02 0.0091 27.7 9.2 88 33-123 150-251 (525)
309 PRK06018 putative acyl-CoA syn 24.3 3.9E+02 0.0084 28.1 9.0 84 213-297 38-125 (542)
310 PRK08246 threonine dehydratase 23.7 6.6E+02 0.014 24.2 10.0 61 69-130 67-127 (310)
311 PRK08526 threonine dehydratase 23.6 5.9E+02 0.013 25.7 9.6 59 77-135 74-132 (403)
312 PRK13390 acyl-CoA synthetase; 23.5 8.2E+02 0.018 25.2 11.4 79 213-292 23-105 (501)
313 PRK07008 long-chain-fatty-acid 23.5 2.2E+02 0.0048 29.9 7.0 87 44-132 194-282 (539)
314 PRK05638 threonine synthase; V 23.3 3.6E+02 0.0078 27.7 8.1 91 36-132 81-173 (442)
315 PLN02409 serine--glyoxylate am 23.2 6.8E+02 0.015 25.1 10.1 74 50-124 39-114 (401)
316 PRK06721 threonine synthase; R 23.1 4.7E+02 0.01 25.8 8.7 88 36-129 44-134 (352)
317 PRK08813 threonine dehydratase 23.0 7.4E+02 0.016 24.5 10.3 84 44-132 59-142 (349)
318 cd02070 corrinoid_protein_B12- 22.8 5.5E+02 0.012 22.8 12.1 98 42-139 47-158 (201)
319 PRK06145 acyl-CoA synthetase; 22.8 6.6E+02 0.014 25.8 10.3 95 33-131 147-252 (497)
320 cd06447 D-Ser-dehyd D-Serine d 22.4 4.7E+02 0.01 26.5 8.4 60 74-133 137-196 (404)
321 PRK06060 acyl-CoA synthetase; 22.3 4.8E+02 0.01 28.7 9.5 81 214-295 30-114 (705)
322 PRK06710 long-chain-fatty-acid 21.8 4.3E+02 0.0094 27.9 8.8 81 214-295 49-133 (563)
323 cd00615 Orn_deC_like Ornithine 21.8 5.5E+02 0.012 24.4 8.7 55 67-124 96-161 (294)
324 KOG0025 Zn2+-binding dehydroge 21.7 3.2E+02 0.0069 26.0 6.4 64 66-129 157-221 (354)
325 PRK07768 long-chain-fatty-acid 21.5 6.8E+02 0.015 26.2 10.2 93 33-128 150-257 (545)
326 PF00682 HMGL-like: HMGL-like 21.3 3.4E+02 0.0074 24.8 6.9 71 22-98 139-210 (237)
327 cd01448 TST_Repeat_1 Thiosulfa 21.3 2.1E+02 0.0045 22.8 4.9 41 56-96 65-106 (122)
328 cd02067 B12-binding B12 bindin 21.0 4.2E+02 0.0092 20.9 8.3 56 84-139 17-75 (119)
329 PRK06110 hypothetical protein; 21.0 7E+02 0.015 24.2 9.3 60 75-134 74-133 (322)
330 PRK15400 lysine decarboxylase 20.9 2.5E+02 0.0053 30.8 6.4 98 23-134 198-315 (714)
331 TIGR02991 ectoine_eutB ectoine 20.9 7.5E+02 0.016 23.9 9.4 54 76-129 72-125 (317)
332 PRK08638 threonine dehydratase 20.8 7.3E+02 0.016 24.2 9.4 57 77-133 81-137 (333)
333 PF10411 DsbC_N: Disulfide bon 20.3 92 0.002 21.2 2.1 21 434-454 32-52 (57)
334 PRK07867 acyl-CoA synthetase; 20.2 7.2E+02 0.016 26.0 10.0 83 214-297 28-115 (529)
335 COG2062 SixA Phosphohistidine 20.2 4.1E+02 0.0088 22.9 6.4 90 26-117 6-98 (163)
336 TIGR02080 O_succ_thio_ly O-suc 20.2 4.8E+02 0.01 26.1 8.1 49 76-124 71-122 (382)
337 PRK09029 O-succinylbenzoic aci 20.2 5.8E+02 0.012 26.0 9.1 78 214-292 28-109 (458)
338 PRK08574 cystathionine gamma-s 20.1 4.4E+02 0.0095 26.4 7.9 11 47-57 54-64 (385)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-81 Score=627.56 Aligned_cols=513 Identities=40% Similarity=0.618 Sum_probs=440.9
Q ss_pred hhhcccCHHHHHhhhhhcCCCc-eeEEECC---ccccHHHHHHHHHHHHHHHHHcc--CCCCCEEEEEcCChHHHHHHHH
Q 008389 15 ANYMALTPLWFLDRAATVHPTR-TSVVHGS---TRYTWLQTYQRCRRLASALCKRS--IGLGCTVAIIAPNIPAIYEAHF 88 (567)
Q Consensus 15 ~~~~~~t~~~~l~~~a~~~p~~-~a~~~~~---~~~Ty~el~~~~~~lA~~L~~~g--~~~gd~V~l~~~~~~~~~~~~l 88 (567)
.+...++....+.+.+..++++ +++++.. +.+||.|+..++.++|..|.++| +++||+|++++||++++.+++|
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~l 90 (537)
T KOG1176|consen 11 ANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELAL 90 (537)
T ss_pred ccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3444555555555555556555 7777755 99999999999999999999875 8899999999999999999999
Q ss_pred hhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhcc
Q 008389 89 GVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYAL 168 (567)
Q Consensus 89 A~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (567)
||+.+|+++.++||.+.+.++.++++.++++++|++.+..+.+.+....+. ..++.+........ ...
T Consensus 91 a~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---------~~i~~l~~~~~~~~---~~~ 158 (537)
T KOG1176|consen 91 AVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---------LKIIVLTGDEGVIS---ISD 158 (537)
T ss_pred HHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---------CceEEEecccCccc---ccc
Confidence 999999999999999999999999999999999999999998887655432 44444444311100 000
Q ss_pred CCChHH-HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccc
Q 008389 169 GRGAVE-YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFH 247 (567)
Q Consensus 169 ~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 247 (567)
...... ++.+.....+.. ..+...+|+++++|||||||.||||.+||++++.+.......+.+...++.++.+|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H 236 (537)
T KOG1176|consen 159 LVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFH 236 (537)
T ss_pred ccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHH
Confidence 011111 555555555444 45677899999999999999999999999999999887777778888999999999999
Q ss_pred hhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHH
Q 008389 248 CNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSV 326 (567)
Q Consensus 248 ~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~ 326 (567)
.+|+...+.+.+.+++.++. ..+++..+++.|++|++|++..+|..+..|++.+....++ ++++|.+.+||+++++++
T Consensus 237 ~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~-l~sl~~v~~gga~~~~~~ 315 (537)
T KOG1176|consen 237 IYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYD-LSSLRSVLSGGAPLSPAT 315 (537)
T ss_pred HhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCccc-CCccEEEEecCCCCCHHH
Confidence 99999999977776666665 5679999999999999999999999999999988555566 999999999999999999
Q ss_pred HHHHHhc-C-CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEE
Q 008389 327 LHAMSQK-G-FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGE 404 (567)
Q Consensus 327 ~~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 404 (567)
.+++.+. + ..+.+.||+||+++.++.+...++ +..+++|.+++++ ...|.+ ++|+.++++ +.||
T Consensus 316 ~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~-e~g~~l~~~--~~GE 381 (537)
T KOG1176|consen 316 LEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLD-ETGVSLGPN--QTGE 381 (537)
T ss_pred HHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeC-CCCCCCCCC--CceE
Confidence 9999855 5 899999999999999888765432 4569999999977 555555 459999998 7899
Q ss_pred EEEecccccccccCCCccchhcccC-CccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEE
Q 008389 405 IVMSGNVVMKGYLKNPKANEETFAN-GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASV 483 (567)
Q Consensus 405 i~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 483 (567)
||++|+.++.||+++|+.|.+.|.+ |||+|||+|++|+||+|++.+|++|+||.+|++|+|.|||++|..||.|.|++|
T Consensus 382 I~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaV 461 (537)
T KOG1176|consen 382 ICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAV 461 (537)
T ss_pred EEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEE
Confidence 9999999999999999999999976 999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCC
Q 008389 484 VARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGP 561 (567)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (567)
++.+++.+|+.++|+|+.+++. ..++ ++|.+++++++++|+.|..+.|++ ||+|++|||+|+.||+.+.+...
T Consensus 462 vgipDe~~Ge~p~A~VV~k~g~-~lte----~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~~ 535 (537)
T KOG1176|consen 462 VGIPDEVWGETPAAFVVLKKGS-TLTE----KDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLGS 535 (537)
T ss_pred EcccccccCCcceEEEEecCCC-cCCH----HHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhccc
Confidence 9999999999999999999966 6667 899999999999999999999998 99999999999999999988643
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.1e-78 Score=601.79 Aligned_cols=492 Identities=27% Similarity=0.381 Sum_probs=420.3
Q ss_pred HHHhhhhh-cCCCceeEEECC-----ccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 24 WFLDRAAT-VHPTRTSVVHGS-----TRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 24 ~~l~~~a~-~~p~~~a~~~~~-----~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
..++++.+ ..+|+.|+++.+ +++||+||.+.+.++|+.|++ .|+ +||||++++|+.+++++++|||+++|++
T Consensus 13 n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI 91 (528)
T COG0365 13 NALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAI 91 (528)
T ss_pred hhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 35666665 347899999964 679999999999999999986 578 9999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHH--HHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEAL--KIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
.+|+.+.++++.+..++++++++++|+.+......+... ..... ....++++.... ..
T Consensus 92 ~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~------~~~~~iv~~r~~--------------~~ 151 (528)
T COG0365 92 PAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADA------VLSSVVVVPRLG--------------LW 151 (528)
T ss_pred EeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHH------hhcceEEecccc--------------cc
Confidence 999999999999999999999999999887655433211 11110 011134433321 56
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHH-HHhccCCCcEEEEecCccchhhhHH
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVA-LIWGMNEGAVYLWTLPMFHCNGWCY 253 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (567)
|.+.+.......... +.+.+|+++++|||||||+||+|+++|.+++....... ..+.+.++|++++..++.|++|..+
T Consensus 152 ~~~~~~~~~~~~~~~-~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~ 230 (528)
T COG0365 152 YDEAVEKASEKFEFE-PLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWY 230 (528)
T ss_pred HHHHhhccCCCCCcc-ccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchH
Confidence 777776665554333 37889999999999999999999999998776665554 4678889999999999999999988
Q ss_pred HHHH-hhhcCeeEEecc--C-CHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHH
Q 008389 254 TWSL-AALCGTSICLRQ--V-TAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHA 329 (567)
Q Consensus 254 ~~~~-~~~g~~~~~~~~--~-~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~ 329 (567)
.+.. ++.|++.+++.. + ++..+++.|+++++|++++.|+.+++|.+.....+++ +++||.+.+.|||++++..++
T Consensus 231 ~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~d-lssLr~~~SaGEPLnpe~~~w 309 (528)
T COG0365 231 SVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYD-LSSLRVLGSAGEPLNPEAFEW 309 (528)
T ss_pred HHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCccccc-chhheeeeccCCCCCHHHHHH
Confidence 5554 556777766632 3 4899999999999999999999999999987744455 999999999999999999999
Q ss_pred HHhc-CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEe
Q 008389 330 MSQK-GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMS 408 (567)
Q Consensus 330 ~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~ 408 (567)
+.+. |++|.+.||+||++++...... ....++.|.|+||. .++|+|++ |++++++ + |+|+++
T Consensus 310 ~~~~~g~~i~d~~gqTEtg~~~~~~~~------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~ 372 (528)
T COG0365 310 FYSALGVWILDIYGQTETGMGFIAGRP------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVR 372 (528)
T ss_pred HHHHhCCCEeccccccccCccccCCCC------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEe
Confidence 9965 9999999999999854443221 12335569999999 89999999 9999998 6 999999
Q ss_pred cc--cccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 409 GN--VVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 409 ~~--~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
.+ .++++||++++...+.+-++||.|||.+++|+||+++++||.||+||+.|.++.+.|||++|.+||.|.||+|++.
T Consensus 373 ~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~ 452 (528)
T COG0365 373 LPWPGMALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGV 452 (528)
T ss_pred CCCchhhhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEec
Confidence 87 8999999999999988877799999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
+++..|+.+.+||+++++. ..+ ++.++|++++++.+.++..|+.|.|++ ||+|.+|||+|+.||+.+.+
T Consensus 453 pd~~kg~~v~afVvL~~g~-~~~--~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 453 PDPGKGQIVLAFVVLAAGV-EPN--ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred cCCCCCcEEEEEEEecCCC-ChH--HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 9999999999999999998 555 888999999999888899999999998 99999999999999999885
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=6e-78 Score=561.03 Aligned_cols=523 Identities=25% Similarity=0.349 Sum_probs=448.3
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEEC--CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHG--STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
.-..|+.++++..+++.||+.|+++. +.++||+||.+.++.+|.+|..+|+++||||+++.||+.+|+..+|||.++|
T Consensus 47 l~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG 126 (596)
T KOG1177|consen 47 LDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAG 126 (596)
T ss_pred cccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhc
Confidence 33679999999999999999999984 5789999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccch-----HHHHHHHHHHhhhcCC------CCCCCeEEEecCCCCCccc
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF-----KLAEEALKIMEEKSNG------RFKPPLLIVIGDESCDPKD 163 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~ 163 (567)
.+.+++||.+...+++..|++.+++++|+.+.+. +.+.+...++....-+ .+...+++..+++.
T Consensus 127 ~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~----- 201 (596)
T KOG1177|consen 127 LVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH----- 201 (596)
T ss_pred eEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC-----
Confidence 9999999999999999999999999999977543 3344333333222111 13344555555332
Q ss_pred chhccCCChHHHHHHHhcCCCCCCCC-----CCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcE
Q 008389 164 LKYALGRGAVEYEKFLQTGDPQFDWK-----PPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAV 238 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~ 238 (567)
...+...+++++.......... .-..+++++.|.|||||||.|||+-+||-++++++......++++..++
T Consensus 202 ----~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~ 277 (596)
T KOG1177|consen 202 ----PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHR 277 (596)
T ss_pred ----cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceE
Confidence 2346677788777665432111 1246789999999999999999999999999999999999999999999
Q ss_pred EEEecCccchhhhHHH-HHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhh
Q 008389 239 YLWTLPMFHCNGWCYT-WSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVN 316 (567)
Q Consensus 239 ~~~~~p~~~~~g~~~~-~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~ 316 (567)
+++..|++|.+|.... +.++..|+++++. +.+++...+.+|+++|+|.++++|++|..|++.+.....+ ++++|.++
T Consensus 278 i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~-~s~lr~~v 356 (596)
T KOG1177|consen 278 ICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVD-LSSLRKGV 356 (596)
T ss_pred EEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCc-hhhhhhhe
Confidence 9999999999996654 4555667777775 5699999999999999999999999999999999988888 99999999
Q ss_pred ccCCCCCHHHHHHHHh-cCC-eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCc
Q 008389 317 TAGAAPPPSVLHAMSQ-KGF-HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQP 394 (567)
Q Consensus 317 ~~G~~l~~~~~~~~~~-~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (567)
+||+++++++.+.+.. .+. .+...||+||++...+.... ++.......++|..+++. +..|+|.+ |..
T Consensus 357 igGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~--------~D~~~~~~ksVG~~m~h~-Ea~iv~~~-g~~ 426 (596)
T KOG1177|consen 357 IGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLL--------GDPPEERIKSVGHLMDHY-EAAIVDKD-GSE 426 (596)
T ss_pred eCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecC--------CCCHHHHHhhhhhccccc-ccccccCC-CCc
Confidence 9999999999999984 454 58889999999877776543 334455668899999999 89999955 999
Q ss_pred cCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHh
Q 008389 395 VPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMY 473 (567)
Q Consensus 395 ~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 473 (567)
++.+ ..|||+++|.+.+.|||++++.+.+.. .|.||+|||+|.+|++|.++++||.+|+|+.+|++|+|.|||+.|.
T Consensus 427 v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~ 504 (596)
T KOG1177|consen 427 VPLG--TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLN 504 (596)
T ss_pred cccC--CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHh
Confidence 9999 669999999999999999998887766 6889999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEEEEeecCCCCCcceEEEEEcCCccc-hhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHH
Q 008389 474 LHPAVLEASVVARADERWGESPCAFVTLKPEVDK-SNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHV 551 (567)
Q Consensus 474 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~-~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~ 551 (567)
+||.|.++.|++++++..|+.++|+|.++.+... .+. ++|.++|+.++.++.+|++|.|.+ +|+|.+|||+|-+
T Consensus 505 ~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~~t~----E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFe 580 (596)
T KOG1177|consen 505 KHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGKTTA----ETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFE 580 (596)
T ss_pred hCCCeeeEEEEccCCCcccceEEEEEEeeccccccccH----HHHHHHHhcccccccCCcEEEEeccCcccccccchhHH
Confidence 9999999999999999999999999999988632 234 789999999999999999999988 9999999999999
Q ss_pred HHHHHHHcCCcccc
Q 008389 552 LRAKAKEMGPVRKS 565 (567)
Q Consensus 552 l~~~~~~~~~~~~~ 565 (567)
+|++++.......+
T Consensus 581 ir~~~k~~l~l~~~ 594 (596)
T KOG1177|consen 581 IREMSKGHLGLFTV 594 (596)
T ss_pred HHHHHHhhcceeee
Confidence 99999865544433
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-76 Score=613.55 Aligned_cols=508 Identities=33% Similarity=0.496 Sum_probs=433.5
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECCcc--ccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhc
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGSTR--YTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMA 93 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~--~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 93 (567)
.++.+++.+++++.+..+|+++|+++.+.. +||+||++++.++|..|++.|+++||+|+|+++|++++++++|||+++
T Consensus 7 ~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 7 MTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred ccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 355689999999999999999999998877 999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChH
Q 008389 94 GAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAV 173 (567)
Q Consensus 94 G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (567)
|++++|++|.+...++.++++.+++++++++.+..+.........+ ....+.......... . .
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~---------~-~ 149 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP-------VVLVVLLVGDADDRL---------P-I 149 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC-------cceEEEecccccccc---------c-c
Confidence 9999999999999999999999999999999884444333322111 111122211111000 0 2
Q ss_pred HHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc--cCCCcEEEEecCccchhhh
Q 008389 174 EYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG--MNEGAVYLWTLPMFHCNGW 251 (567)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~d~~~~~~p~~~~~g~ 251 (567)
.+++.............+.+++++++++|||||||.||+|++||+|+..+.......++ +++.|++++.+|++|.+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl 229 (534)
T COG0318 150 TLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGL 229 (534)
T ss_pred cHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHH
Confidence 45555444333333333367899999999999999999999999999999988888888 8999999999999999999
Q ss_pred HHHHHHh-hhcCeeEEec--cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCc-hhhhhccCCCCCHHHH
Q 008389 252 CYTWSLA-ALCGTSICLR--QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPH-VVHVNTAGAAPPPSVL 327 (567)
Q Consensus 252 ~~~~~~~-~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~-lr~i~~~G~~l~~~~~ 327 (567)
...+.++ +.|++.++.. .+++..++..+.++++|++.++|+++..+++........ +.. +|.++.||+++++++.
T Consensus 230 ~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~-~~~~lr~~~~gg~~~~~~~~ 308 (534)
T COG0318 230 IVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDD-LSSSLRLVLSGGAPLPPELL 308 (534)
T ss_pred HHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccc-cccceEEEEecCCcCCHHHH
Confidence 9888875 4555555555 489999999999999999999999999999988776655 554 9999999999999999
Q ss_pred HHHHhc-C-CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEE
Q 008389 328 HAMSQK-G-FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEI 405 (567)
Q Consensus 328 ~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei 405 (567)
+++.+. + ..+.+.||+||+++.++...... . ....+.+|.|+|++ +++|+|++++.+.| | ++|||
T Consensus 309 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGei 375 (534)
T COG0318 309 ERFEERFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGEI 375 (534)
T ss_pred HHHHHHhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceEE
Confidence 999955 5 47999999999987776654322 0 23446669999999 89999999776666 5 79999
Q ss_pred EEecccccccccCCCccchhcccC-CccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEE
Q 008389 406 VMSGNVVMKGYLKNPKANEETFAN-GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVV 484 (567)
Q Consensus 406 ~v~~~~~~~gy~~~~~~~~~~~~~-g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 484 (567)
+++||+++.|||++|+.+...|.+ |||+|||+|++|++|++++.||.+|+|+++|++|+|.|||.++.++|.|.+++|+
T Consensus 376 ~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavv 455 (534)
T COG0318 376 WVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVV 455 (534)
T ss_pred EEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEE
Confidence 999999999999999999998886 9999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCcceEEEEEcCCcc-chhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 485 ARADERWGESPCAFVTLKPEVD-KSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 485 ~~~~~~~g~~~~~~v~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
+++++.+|++++++++++++.. ..+. ++|.++++++++.+.+|+.+.+++ +|+|++||++|+.|++.+.+
T Consensus 456 gvpd~~~Ge~~~a~v~~~~~~~~~~~~----~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 456 GVPDERWGERVVAVVVLKPGGDAELTA----EELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred eCCCCccCceEEEEEEEcCCCCCCCCH----HHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 9999999999999999998742 2234 789999999999999999999987 99999999999999999887
No 5
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-72 Score=600.63 Aligned_cols=517 Identities=19% Similarity=0.235 Sum_probs=412.6
Q ss_pred HHHHhhhhhc--CCCceeEEEC------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 23 LWFLDRAATV--HPTRTSVVHG------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 23 ~~~l~~~a~~--~p~~~a~~~~------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
.++++++++. +|+++|+++. .+++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||+++|
T Consensus 62 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~G 141 (647)
T PTZ00237 62 YNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIG 141 (647)
T ss_pred HHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 5777887754 7999999883 3689999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccc---------hHHHHHHHHHHhhhcCCCCCCCeEEEecCCCC-Ccccc
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEY---------FKLAEEALKIMEEKSNGRFKPPLLIVIGDESC-DPKDL 164 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~ 164 (567)
++++|+++.++.+++.+++++++++++|+++.. .+.+.++.. .. ......++.+..... .....
T Consensus 142 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~vi~~~~~~~~~~~~~ 215 (647)
T PTZ00237 142 ATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIE-LS-----TFKPSNVITLFRNDITSESDL 215 (647)
T ss_pred cEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHh-cc-----cCCCCEEEEEEcCCccccccc
Confidence 999999999999999999999999999997531 222222221 10 001234444422110 00000
Q ss_pred ----hhccCCChHHHHHHHhcCC----CCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHH-HHHHHHHHHHHhccCC
Q 008389 165 ----KYALGRGAVEYEKFLQTGD----PQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRG-AYLMSLSVALIWGMNE 235 (567)
Q Consensus 165 ----~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~-l~~~~~~~~~~~~~~~ 235 (567)
..........|++++.... .......+.+.+++++|+|||||||.||||+++|.+ +..........+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~ 295 (647)
T PTZ00237 216 KKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDI 295 (647)
T ss_pred ccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCC
Confidence 0000112345666664321 111112335678999999999999999999999998 4443333344456778
Q ss_pred CcEEEEecCccchhhhHHHHHHhhhcCeeEEecc--CC----HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC-----C
Q 008389 236 GAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQ--VT----AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE-----D 304 (567)
Q Consensus 236 ~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~--~~----~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-----~ 304 (567)
++++++..|++|+.+....+.+++.|+++++... .. +..+++.|+++++|+++++|++++.|++.... .
T Consensus 296 ~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 375 (647)
T PTZ00237 296 PTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRS 375 (647)
T ss_pred CcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccccccc
Confidence 8999999999998777677777888888887643 12 68899999999999999999999999875322 2
Q ss_pred CcCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccc
Q 008389 305 TILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEK 383 (567)
Q Consensus 305 ~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 383 (567)
..+ +++||.++++|+++++++.+++.+ +++++++.||+||+++.+...... .....+++|.|+|++ +
T Consensus 376 ~~~-l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~----------~~~~~~s~G~p~~g~-~ 443 (647)
T PTZ00237 376 KYD-LSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGH----------INIPYNATGVPSIFI-K 443 (647)
T ss_pred ccC-cchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCC----------CCCCCCCCccCcCCc-e
Confidence 233 889999999999999999999985 589999999999997654432110 112237899999999 8
Q ss_pred eeEeeCCCCCccCCCCCceEEEEEecc---cccccccCCCccchhccc--CCccccCceEEEeCCCcEEEeccccceeee
Q 008389 384 LDVIDTRTQQPVPADGKTIGEIVMSGN---VVMKGYLKNPKANEETFA--NGWYHTGDLGVKHPDNYIEIKDRSKDIIIS 458 (567)
Q Consensus 384 ~~i~d~~~~~~~~~~~~~~Gei~v~~~---~~~~gy~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~ 458 (567)
++|+|++ |++++.| +.|||++++| .++.|||++++.+...|. +|||+|||+|++++||+++++||+||+||+
T Consensus 444 ~~i~d~~-g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~ 520 (647)
T PTZ00237 444 PSILSED-GKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKI 520 (647)
T ss_pred EEEECCC-CCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEE
Confidence 9999985 9999887 7899999986 789999999998887774 799999999999999999999999999999
Q ss_pred CceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc--chhhHHHHHHHHHHHHhcCCCCCCCceeec
Q 008389 459 GGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD--KSNEQQLAEDIMKFCRAKMPAYWVPKSIVF 536 (567)
Q Consensus 459 ~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~--~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~ 536 (567)
+|++|+|.+||++|.+||.|.+++|++.+++..|+.++++|+++++.. ..+.+++.++|+++++++|+.+++|+.|++
T Consensus 521 ~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~ 600 (647)
T PTZ00237 521 SGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIII 600 (647)
T ss_pred CCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEE
Confidence 999999999999999999999999999999998999999999886431 234456778899999999999999999999
Q ss_pred Cc-ccCCCCccccHHHHHHHHHHcC
Q 008389 537 GP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 537 ~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
++ ||+|++||++|+.|++++....
T Consensus 601 v~~lP~T~sGKi~R~~Lr~~~~~~~ 625 (647)
T PTZ00237 601 VNQLPKTKTGKIPRQIISKFLNDSN 625 (647)
T ss_pred cCCCCCCCCccEeHHHHHHHHcCCC
Confidence 88 9999999999999999986554
No 6
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.1e-71 Score=589.00 Aligned_cols=564 Identities=85% Similarity=1.396 Sum_probs=456.4
Q ss_pred cccccccccchhhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH
Q 008389 4 AKGIDDLPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI 83 (567)
Q Consensus 4 ~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~ 83 (567)
.+.++++-..-+.+..++++.++++.+..+|+++|+++.+.++||+||++++.++|..|.+.|+++||+|+++++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~ 83 (567)
T PLN02479 4 ERDIDDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM 83 (567)
T ss_pred ccccccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH
Confidence 34566666766777778899999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCccc
Q 008389 84 YEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKD 163 (567)
Q Consensus 84 ~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 163 (567)
+++++||+++|++++|+++.++.+++.++++.+++++++++++..+...+....+............++.+.........
T Consensus 84 ~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (567)
T PLN02479 84 YEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKS 163 (567)
T ss_pred HHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccc
Confidence 99999999999999999999999999999999999999999887766555444332111111122334444332211111
Q ss_pred chhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEec
Q 008389 164 LKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTL 243 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~ 243 (567)
.......+...+.+++....+......+...+++++++|||||||.||+|.+||+++..........++++.++++++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (567)
T PLN02479 164 LQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTL 243 (567)
T ss_pred cccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEec
Confidence 11111223445677766543322222223445678899999999999999999999877666555667888999999999
Q ss_pred CccchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCC
Q 008389 244 PMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPP 323 (567)
Q Consensus 244 p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~ 323 (567)
|++|.+++...+...+.+++.+++..+++..+++.++++++|++.++|+++..|.+.........+++++.++++|++++
T Consensus 244 p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~ 323 (567)
T PLN02479 244 PMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPP 323 (567)
T ss_pred chhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCC
Confidence 99999998777666667777777778899999999999999999999999999987654333222788999999999999
Q ss_pred HHHHHHHHhcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceE
Q 008389 324 PSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIG 403 (567)
Q Consensus 324 ~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~G 403 (567)
+.+.+.+.+.++++++.||+||+++.++.+...+.+...+...........|.+.+++..++|+|++++.+++.++.+.|
T Consensus 324 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~G 403 (567)
T PLN02479 324 PSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMG 403 (567)
T ss_pred HHHHHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCce
Confidence 99999998778999999999999766555443333222221111122245788888874488999777888887654689
Q ss_pred EEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEE
Q 008389 404 EIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASV 483 (567)
Q Consensus 404 ei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 483 (567)
||+++|++++.|||++++.+...|.+|||+|||+|+++++|++++.||.+|+|+.+|++|+|.+||..+.++|.|.+++|
T Consensus 404 El~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v 483 (567)
T PLN02479 404 EIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASV 483 (567)
T ss_pred EEEEeccchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCcccCCCCccccHHHHHHHHHHcCCcc
Q 008389 484 VARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLRAKAKEMGPVR 563 (567)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~lP~t~~GKi~r~~l~~~~~~~~~~~ 563 (567)
++.+++..++.+++++++.++....+.+...++++++++++|+.|+.|..+.+.++|+|++||++|+.|++++.+..++.
T Consensus 484 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gKv~r~~L~~~~~~~~~~~ 563 (567)
T PLN02479 484 VARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVFGPLPKTATGKIQKHVLRAKAKEMGPVK 563 (567)
T ss_pred EeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEeccCCCCCccCeeHHHHHHHHHhhCCcc
Confidence 99998887889999999887642222234457899999999999999999888669999999999999999999999999
Q ss_pred ccCC
Q 008389 564 KSKL 567 (567)
Q Consensus 564 ~~~~ 567 (567)
+|||
T Consensus 564 ~~~~ 567 (567)
T PLN02479 564 KSRL 567 (567)
T ss_pred cccC
Confidence 9986
No 7
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.7e-71 Score=586.16 Aligned_cols=538 Identities=49% Similarity=0.848 Sum_probs=426.6
Q ss_pred hhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 15 ANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 15 ~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
+..++.|+.++|.+.++.+|+++|+.+.+.++||+||.+++.++|+.|.+.|+++||+|+|+++|++++++++|||+++|
T Consensus 9 ~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G 88 (579)
T PLN03102 9 ANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAG 88 (579)
T ss_pred cccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcC
Confidence 34455789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++++|+++.++.+++.++++.++++++|++.+..+.+.+....+..... .....++.++....... ......+
T Consensus 89 ~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~ 161 (579)
T PLN03102 89 AVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDS--NLNLPVIFIHEIDFPKR-----PSSEELD 161 (579)
T ss_pred cEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhcccccc--ccCceEEEecccccccC-----CcccccC
Confidence 9999999999999999999999999999998877666554433321100 01123444432111000 0012234
Q ss_pred HHHHHhcCCCCCCC----CCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhh
Q 008389 175 YEKFLQTGDPQFDW----KPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNG 250 (567)
Q Consensus 175 ~~~~l~~~~~~~~~----~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 250 (567)
+.+++......... ......+++++|+|||||||.||+|.++|.++..........+.+...+++++.+|++|..|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 241 (579)
T PLN03102 162 YECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNG 241 (579)
T ss_pred HHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcc
Confidence 55655443322111 11235689999999999999999999999997655544444456677889999999999999
Q ss_pred hHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHH
Q 008389 251 WCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAM 330 (567)
Q Consensus 251 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~ 330 (567)
+...+.++..|+++++...+++..+++.|+++++|++.++|+++..|.+........ .++++.+++||+++++.+.+++
T Consensus 242 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~~~~gg~~~~~~~~~~~ 320 (579)
T PLN03102 242 WTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSP-RSGPVHVLTGGSPPPAALVKKV 320 (579)
T ss_pred hhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCC-cccceEEEECCCCCCHHHHHHH
Confidence 987777888899998888888999999999999999999999999999865433222 5677889999999999999999
Q ss_pred HhcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecc
Q 008389 331 SQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGN 410 (567)
Q Consensus 331 ~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~ 410 (567)
+++++++++.||+||+++.+..+.....+...+...........|.+.++...+.+.+.+++++++.++.+.|||+++|+
T Consensus 321 ~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~GEl~v~g~ 400 (579)
T PLN03102 321 QRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTMGEIVIKGS 400 (579)
T ss_pred HHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCceEEEEECc
Confidence 88899999999999998765544322222111111101111223333333325677777777888765446899999999
Q ss_pred cccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCC
Q 008389 411 VVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADER 490 (567)
Q Consensus 411 ~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~ 490 (567)
.++.||+++++.+...|.+|||+|||+|++++||++++.||.+|+|+.+|++|+|.+||.++.++|.|.+++|++.+++.
T Consensus 401 ~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~ 480 (579)
T PLN03102 401 SIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPT 480 (579)
T ss_pred chhhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcceEEEEEcCCccchhh-----HHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 491 WGESPCAFVTLKPEVDKSNE-----QQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~-----~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
.|+.++++|++.++....+. .....+++++++++|++|++|..+++++ +|+|++||++|++|+++..+..
T Consensus 481 ~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~~~ 556 (579)
T PLN03102 481 WGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKGLV 556 (579)
T ss_pred ccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHHhh
Confidence 88999999998876421100 0012678999999999999999999888 9999999999999999987643
No 8
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.8e-73 Score=516.87 Aligned_cols=506 Identities=27% Similarity=0.398 Sum_probs=445.9
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
-|.+.|+.++|.++|.++||++|+++.++++||+||+++++++|..|++.||++||+|.+.+||..+|++++||++++|+
T Consensus 24 yW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 24 YWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEccc-----chHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCC
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQE-----YFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGR 170 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (567)
.+|.-=|.-...+|.++.+.+.++++|.+.. ..+..++.+.+.. ..+++++.++....
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~-------tlr~v~v~ge~~~~---------- 166 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP-------TLRHVIVAGEAEHP---------- 166 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC-------cceEEEEccCCCCc----------
Confidence 9998888888999999999999999998763 4455565555554 55666666443211
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhh
Q 008389 171 GAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNG 250 (567)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 250 (567)
......+........+..+.++++++++..+.||||.||.|..||.....+.....+..+++..+++++.+|..|.+.
T Consensus 167 --~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfp 244 (542)
T COG1021 167 --SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFP 244 (542)
T ss_pred --chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCC
Confidence 123333444444455556788899999999999999999999999999999988888899999999999999999888
Q ss_pred hH--HHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHH
Q 008389 251 WC--YTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLH 328 (567)
Q Consensus 251 ~~--~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~ 328 (567)
+. ..+..+..||++|+.++.++..-+.+|+++++|+...+|.....|++..+....+ +++||.+=+||..++++..+
T Consensus 245 lssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~-LsSLrllQVGGarl~~~~Ar 323 (542)
T COG1021 245 LSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERAD-LSSLRLLQVGGARLSATLAR 323 (542)
T ss_pred CCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCC-chheeEEeecCcccCHHHHh
Confidence 76 4666778899999999999999999999999999999999999999998887777 99999999999999999999
Q ss_pred HHH-hcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEE
Q 008389 329 AMS-QKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVM 407 (567)
Q Consensus 329 ~~~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v 407 (567)
++. .+||.+.+.|||.|.-...+ .. .+.......+.|+|+....+++|+|.+ |+++++| |+|++..
T Consensus 324 rv~~~lgC~LQQVFGMAEGLvnyT--RL--------DDp~E~i~~TQGrPlsP~DEvrvvD~d-g~pv~pG--E~G~Llt 390 (542)
T COG1021 324 RVPAVLGCQLQQVFGMAEGLVNYT--RL--------DDPPEIIIHTQGRPLSPDDEVRVVDAD-GNPVAPG--EVGELLT 390 (542)
T ss_pred hchhhhCchHHHHhhhhhhhhccc--cc--------CCchHheeecCCCcCCCcceeEEecCC-CCCCCCC--Ccceeee
Confidence 998 56999999999999533222 11 122334557889999888799999998 9999999 8999999
Q ss_pred ecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 408 SGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 408 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
+||...+|||+.++.|...| .+|+|+|||+++.++||++.+.||.+|+|+.+|+||-.+|||+.|..||.|.++++++.
T Consensus 391 RGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVam 470 (542)
T COG1021 391 RGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAM 470 (542)
T ss_pred cCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcC
Confidence 99999999999999999999 69999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc-CCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK-MPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
+++..|++.++||+.++.. .+. .++++++++. +..|++|.+|.+++ +|.|+-|||+++.|++++....
T Consensus 471 pDelLGEksCAfiv~~~~~--~~~----~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~~ 540 (542)
T COG1021 471 PDELLGEKSCAFIVVKEPP--LRA----AQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASRL 540 (542)
T ss_pred chhhcCcceeEEEEecCCC--CCH----HHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhhc
Confidence 9999999999999998874 344 6788888765 99999999999999 9999999999999999887654
No 9
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-72 Score=588.73 Aligned_cols=496 Identities=24% Similarity=0.336 Sum_probs=422.0
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
.|+.++|++.++++||++|+++.++++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFL 179 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (567)
+++.++.+++.++++.++++++|++.+..+.+........ .. ..+........ ........+++++
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~------~~~~~~~~~~~~~ 194 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG-------RL-RAWGGNPDDDE------PSGSTDETLDDLI 194 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc-------cc-eEEEEecCccc------cCCcCcccHHHHh
Confidence 9999999999999999999999999877665544211111 11 12211111100 1113445677776
Q ss_pred hcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhh
Q 008389 180 QTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAA 259 (567)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (567)
....... .+...+++++++|||||||.||+|.++|+++..........+++..+++++...|++|.+|+...+.++.
T Consensus 195 ~~~~~~~---~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~ 271 (549)
T PRK07788 195 AGSSTAP---LPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMA 271 (549)
T ss_pred cCCCCCC---CCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHH
Confidence 5433221 2234567899999999999999999999999988888878888999999999999999999987777888
Q ss_pred hcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHHHHh-cCCe
Q 008389 260 LCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFH 336 (567)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~ 336 (567)
.|+++++...+++..+++.++++++|++.++|+++..+++.... .... ++++|.+++||+++++++.+++.+ ++++
T Consensus 272 ~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 350 (549)
T PRK07788 272 LGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYD-TSSLKIIFVSGSALSPELATRALEAFGPV 350 (549)
T ss_pred hCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCC-CCceeEEEEeCCCCCHHHHHHHHHHhCcc
Confidence 88888888788999999999999999999999999999987654 3333 789999999999999999999985 5889
Q ss_pred eeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccc
Q 008389 337 VTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGY 416 (567)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy 416 (567)
+++.||+||++.....+. ........++|.|++++ .++|+|++ +++++.| +.|||+++|+.++.||
T Consensus 351 l~~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~~~gY 416 (549)
T PRK07788 351 LYNLYGSTEVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDEN-GNEVPRG--VVGRIFVGNGFPFEGY 416 (549)
T ss_pred ceeccCcchhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECCC-cCCCCCC--CeEEEEEeCCCccccc
Confidence 999999999875443221 11122346899999999 89999987 8899887 8999999999999999
Q ss_pred cCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcce
Q 008389 417 LKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPC 496 (567)
Q Consensus 417 ~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~ 496 (567)
++++.. .+.+|||+|||+|+++++|.+++.||.||+|+++|++|+|.+||+.+.++|+|.+++|++.+++..|+.++
T Consensus 417 ~~~~~~---~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~ 493 (549)
T PRK07788 417 TDGRDK---QIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLR 493 (549)
T ss_pred cCCCcc---cccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEE
Confidence 988765 34589999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred EEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 497 AFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 497 ~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
++|+++++. ..+. ++++++++++|+.|++|..+.+++ +|+|++||++|++|++.
T Consensus 494 a~vv~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 494 AFVVKAPGA-ALDE----DAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEeCCCC-CCCH----HHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 999988765 4444 789999999999999999999888 99999999999999753
No 10
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.7e-71 Score=591.16 Aligned_cols=520 Identities=21% Similarity=0.265 Sum_probs=412.9
Q ss_pred cCH-HHHHhhhhh-cCCCceeEEEC------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhh
Q 008389 20 LTP-LWFLDRAAT-VHPTRTSVVHG------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVP 91 (567)
Q Consensus 20 ~t~-~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~ 91 (567)
+|+ .++|+++++ .+|+++|+++. .+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+
T Consensus 87 ~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~ 166 (666)
T PLN02654 87 TNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACA 166 (666)
T ss_pred eeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 445 578877775 48999999874 2689999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeeccccCChHHHHHHHhccCceEEEEcccchH---------HHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcc
Q 008389 92 MAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK---------LAEEALKIMEEKSNGRFKPPLLIVIGDESCDPK 162 (567)
Q Consensus 92 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 162 (567)
++|++++|+++.++.+++..+++.++++++|++..... .+........ ........++..........
T Consensus 167 ~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (666)
T PLN02654 167 RIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESA---KNGVSVGICLTYENQLAMKR 243 (666)
T ss_pred HcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhcc---ccCCCccEEEEecccccccc
Confidence 99999999999999999999999999999999876432 1111111100 00001122222222110000
Q ss_pred cchhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHH-HHHHHHHhccCCCcEEEE
Q 008389 163 DLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLM-SLSVALIWGMNEGAVYLW 241 (567)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~~~ 241 (567)
............|++++..... .......+.+++++|+|||||||.||||+++|.+++.. .......++++++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~ 322 (666)
T PLN02654 244 EDTKWQEGRDVWWQDVVPNYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWC 322 (666)
T ss_pred cccccccCCcccHHHHhhcCCC-CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 0000000112335555533221 11222356789999999999999999999999997644 344556678999999999
Q ss_pred ecCccchhhhHHH-HHHhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhh
Q 008389 242 TLPMFHCNGWCYT-WSLAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVH 314 (567)
Q Consensus 242 ~~p~~~~~g~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~ 314 (567)
..|++|+.|..+. +..++.|++++++.. +++..+++.|+++++|+++++|++++.|.+.... ...+ +++||.
T Consensus 323 ~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~Lr~ 401 (666)
T PLN02654 323 TADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHS-RKSLRV 401 (666)
T ss_pred cCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCC-hhheeE
Confidence 9999999987654 455667887777743 5789999999999999999999999999976532 2233 789999
Q ss_pred hhccCCCCCHHHHHHHHh-cC---CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCC
Q 008389 315 VNTAGAAPPPSVLHAMSQ-KG---FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTR 390 (567)
Q Consensus 315 i~~~G~~l~~~~~~~~~~-~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~ 390 (567)
++++|++++++..+++.+ ++ +++.+.||+||+++........ ......+++|.|++|+ .++|+|++
T Consensus 402 i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~---------~~~~~~gs~G~p~~g~-~v~i~d~~ 471 (666)
T PLN02654 402 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---------AWPQKPGSATFPFFGV-QPVIVDEK 471 (666)
T ss_pred EEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCC---------CCCCCCCccCCCCCCc-eEEEECCC
Confidence 999999999999998885 45 7899999999998765532210 0112347899999999 89999976
Q ss_pred CCCccCCCCCceEEEEEec--ccccccccCCCccchhcc---cCCccccCceEEEeCCCcEEEeccccceeeeCceecch
Q 008389 391 TQQPVPADGKTIGEIVMSG--NVVMKGYLKNPKANEETF---ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISS 465 (567)
Q Consensus 391 ~~~~~~~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~ 465 (567)
|++++.+ +.|||++++ |.++.|||++++.+...+ .+|||+|||+|++|+||+++++||+||+||++|++|+|
T Consensus 472 -g~~~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p 548 (666)
T PLN02654 472 -GKEIEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGT 548 (666)
T ss_pred -CCCCCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECH
Confidence 8888766 789999999 789999999998877665 27999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCC
Q 008389 466 VEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTAT 544 (567)
Q Consensus 466 ~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~ 544 (567)
.|||+++.++|.|.+++|++.+++..|+.++++|+++++. ..+ +++.++|+++++++|+.++.|+.|.+++ ||+|++
T Consensus 549 ~EIE~~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vvl~~~~-~~~-~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~s 626 (666)
T PLN02654 549 AEVESALVSHPQCAEAAVVGIEHEVKGQGIYAFVTLVEGV-PYS-EELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRS 626 (666)
T ss_pred HHHHHHHHhCCCeeeEEEEeeEcCCCCeEEEEEEEECCCC-CCC-HHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCC
Confidence 9999999999999999999999999899999999999875 222 3455789999999999999999999988 999999
Q ss_pred ccccHHHHHHHHHHc
Q 008389 545 GKIQKHVLRAKAKEM 559 (567)
Q Consensus 545 GKi~r~~l~~~~~~~ 559 (567)
||++|+.|++.+.+.
T Consensus 627 GKi~r~~l~~~~~~~ 641 (666)
T PLN02654 627 GKIMRRILRKIASRQ 641 (666)
T ss_pred cCchHHHHHHHHcCC
Confidence 999999999998653
No 11
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=7.5e-71 Score=588.37 Aligned_cols=520 Identities=21% Similarity=0.261 Sum_probs=415.9
Q ss_pred cCH-HHHHhhhhhcCCCceeEEEC------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 20 LTP-LWFLDRAATVHPTRTSVVHG------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 20 ~t~-~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
+++ .++|++++..+|+++|+++. .+++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||++
T Consensus 51 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~ 130 (628)
T TIGR02316 51 TNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACAR 130 (628)
T ss_pred eeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 444 47888888899999999972 36899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChHHHHHHHhccCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCccc
Q 008389 93 AGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF---------KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKD 163 (567)
Q Consensus 93 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 163 (567)
+|++++|+++.++.+++.++++.++++++|+++... +.+.+...... .....++.++.......
T Consensus 131 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~~~~~~~~- 203 (628)
T TIGR02316 131 IGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ------HPPPHVLLVDRGLAPMR- 203 (628)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcC------CCCCEEEEEeCCCCCcC-
Confidence 999999999999999999999999999999976431 22222211111 12345666653211100
Q ss_pred chhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHH-HHHHHHHhccCCCcEEEEe
Q 008389 164 LKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLM-SLSVALIWGMNEGAVYLWT 242 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~~~~ 242 (567)
........+.+++........+.....++++++|+|||||||.||||+++|.++... .......++++++|++++.
T Consensus 204 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~ 280 (628)
T TIGR02316 204 ---LIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSA 280 (628)
T ss_pred ---cccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEc
Confidence 011123456665544322211222246789999999999999999999999997644 3444556789999999999
Q ss_pred cCccchhhhHH-HHHHhhhcCeeEEec----cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhh
Q 008389 243 LPMFHCNGWCY-TWSLAALCGTSICLR----QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHV 315 (567)
Q Consensus 243 ~p~~~~~g~~~-~~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i 315 (567)
.|++|..|+.+ .+..++.|+++++.. .+++..+++.|+++++|+++++|++++.|.+.... ...+ +++||.+
T Consensus 281 ~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~~ 359 (628)
T TIGR02316 281 SDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHD-LSSLHWL 359 (628)
T ss_pred CCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCC-ccceeEE
Confidence 99999998754 445566777777664 24789999999999999999999999999876432 2233 8899999
Q ss_pred hccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCc
Q 008389 316 NTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQP 394 (567)
Q Consensus 316 ~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (567)
++||+++++++.+++.+ ++.++++.||+||++..+........ ......+++|.|+|++ .++|+|+++|++
T Consensus 360 ~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~-------~~~~~~gs~G~p~~g~-~v~i~d~~~g~~ 431 (628)
T TIGR02316 360 FLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLD-------LKPVKLGSPGLPMYGY-HLRVLDEATGRP 431 (628)
T ss_pred EEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCC-------cCCCCCCCcccCcCCc-eEEEEECCCCCC
Confidence 99999999999999885 58999999999999754433211100 0112347889999999 899999977999
Q ss_pred cCCCCCceEEEEEecc---cccccccCCCccchhcc----cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHH
Q 008389 395 VPADGKTIGEIVMSGN---VVMKGYLKNPKANEETF----ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVE 467 (567)
Q Consensus 395 ~~~~~~~~Gei~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 467 (567)
++.+ +.|||+++|| .++.|||++++.+...+ .++||+|||+|++|+||+++++||.||+||++|.+|+|.|
T Consensus 432 ~~~g--~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~e 509 (628)
T TIGR02316 432 CGPN--EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTRE 509 (628)
T ss_pred CCCC--CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHH
Confidence 9888 7899999998 56789999887665543 5779999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccc---hhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCC
Q 008389 468 VENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDK---SNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTA 543 (567)
Q Consensus 468 iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~---~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~ 543 (567)
||++|.++|+|.+++|++.+++..|+.++++|+++++... .+...+.++|+++++++|+.+++|+.|++++ ||+|+
T Consensus 510 IE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~ 589 (628)
T TIGR02316 510 IEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTR 589 (628)
T ss_pred HHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCC
Confidence 9999999999999999999999989999999998876421 1223455789999999999999999999888 99999
Q ss_pred CccccHHHHHHHHHHcC
Q 008389 544 TGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 544 ~GKi~r~~l~~~~~~~~ 560 (567)
+||++|+.|++.+....
T Consensus 590 sGKi~r~~L~~~~~~~~ 606 (628)
T TIGR02316 590 SGKLLRRSIQALAEGRD 606 (628)
T ss_pred chHHHHHHHHHHHcCCC
Confidence 99999999999876543
No 12
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.3e-70 Score=580.32 Aligned_cols=532 Identities=23% Similarity=0.269 Sum_probs=420.4
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
+..+.|+.++|++.+.++|+++|+++.++++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Ga 82 (563)
T PLN02860 3 NHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGG 82 (563)
T ss_pred chhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccE
Confidence 34578999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEY 175 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
+++|+++.++.+++.++++.+++++++++.+.......... . ........+.+++....... ........
T Consensus 83 v~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~--~----~~~~~~~~i~~~~~~~~~~~----~~~~~~~~ 152 (563)
T PLN02860 83 IVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQN--D----RLPSLMWQVFLESPSSSVFI----FLNSFLTT 152 (563)
T ss_pred EEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhh--c----cCCceeEEEEecCccccccc----chhhcccc
Confidence 99999999999999999999999999998875333322210 0 00012223333321100000 00000111
Q ss_pred HHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHH
Q 008389 176 EKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW 255 (567)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (567)
+++...............++++++++|||||||.||+|.++|+++..+.......+++.++|+++...|++|.+|+...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 232 (563)
T PLN02860 153 EMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAL 232 (563)
T ss_pred chhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHH
Confidence 11111100111111223568999999999999999999999999988777777778899999999999999999998888
Q ss_pred HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCC-cCCCCchhhhhccCCCCCHHHHHHHHhc-
Q 008389 256 SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDT-ILPLPHVVHVNTAGAAPPPSVLHAMSQK- 333 (567)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~~~l~~lr~i~~~G~~l~~~~~~~~~~~- 333 (567)
..+..|+++++.+.+++..+++.|+++++|++.++|+++..|++...... ...++++|.+++||+++++++.+.+.+.
T Consensus 233 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 312 (563)
T PLN02860 233 AMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLF 312 (563)
T ss_pred HHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhc
Confidence 88889999998888999999999999999999999999999987543221 1227899999999999999999999864
Q ss_pred -CCeeeeccCCccCcCCcccccCCCCCCC-C-----------ChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCC
Q 008389 334 -GFHVTHTYGLSETYGPSTVCAWKPEWDS-L-----------PPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGK 400 (567)
Q Consensus 334 -~~~i~~~YG~tE~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 400 (567)
++++++.||+||+++.++.......... . ..........++|.|+|++ +++|++++ .+
T Consensus 313 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g-- 383 (563)
T PLN02860 313 PNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS-- 383 (563)
T ss_pred CCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC--
Confidence 7899999999998765543222110000 0 0000011123689999999 89999865 23
Q ss_pred ceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCce
Q 008389 401 TIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVL 479 (567)
Q Consensus 401 ~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~ 479 (567)
+.|||+++|+.++.|||++++.+...| .+|||+|||+|+++++|++++.||.+|+|+++|++|+|.+||+++.++|+|.
T Consensus 384 ~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~ 463 (563)
T PLN02860 384 RVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVA 463 (563)
T ss_pred ceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcc
Confidence 789999999999999999999888877 5899999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeecCCCCCcceEEEEEcCCccc---------hhhHHHHHHHHHHHHh-cCCCCCCCceeec-Cc-ccCCCCccc
Q 008389 480 EASVVARADERWGESPCAFVTLKPEVDK---------SNEQQLAEDIMKFCRA-KMPAYWVPKSIVF-GP-LPKTATGKI 547 (567)
Q Consensus 480 ~~~v~~~~~~~~g~~~~~~v~~~~~~~~---------~~~~~~~~~l~~~l~~-~l~~~~~p~~i~~-~~-lP~t~~GKi 547 (567)
+++|++.+++..|+.++++|+++++... .......+++++++++ +|+.|++|..+++ .+ ||+|++||+
T Consensus 464 ~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi 543 (563)
T PLN02860 464 SVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKI 543 (563)
T ss_pred eeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccch
Confidence 9999999999889999999998875210 0001112678889987 5999999998875 45 999999999
Q ss_pred cHHHHHHHHHHcCCccccC
Q 008389 548 QKHVLRAKAKEMGPVRKSK 566 (567)
Q Consensus 548 ~r~~l~~~~~~~~~~~~~~ 566 (567)
+|++|++++.+......|.
T Consensus 544 ~r~~L~~~~~~~~~~~~~~ 562 (563)
T PLN02860 544 RRDEVRREVLSHLQSLPSN 562 (563)
T ss_pred hHHHHHHHHHHHHhccccC
Confidence 9999999987765554443
No 13
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-69 Score=578.83 Aligned_cols=512 Identities=26% Similarity=0.375 Sum_probs=413.8
Q ss_pred ccCHHHHHhhhhhcCCCceeEEE--------CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVH--------GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~--------~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
+.|++++|++.++++|+++|+++ ..+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 24 ~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~ 103 (632)
T PRK07529 24 PASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGG 103 (632)
T ss_pred CCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 45899999999999999999987 2479999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccch-----HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcc--c
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF-----KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPK--D 163 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~ 163 (567)
+++| +++|+++.++++++.++++.++++++|++.... +.+.......+ ....++.++....... .
T Consensus 104 ~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~ 175 (632)
T PRK07529 104 EAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP-------ELRTVVEVDLARYLPGPKR 175 (632)
T ss_pred HHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC-------cceeEEEecCccccccccc
Confidence 9999 569999999999999999999999999986542 22222222221 3445555543211000 0
Q ss_pred chhc-----cCCChHHHHHHHhcCCCCC-CCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCc
Q 008389 164 LKYA-----LGRGAVEYEKFLQTGDPQF-DWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGA 237 (567)
Q Consensus 164 ~~~~-----~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d 237 (567)
.... .......+.+.+....... .......++++++++|||||||.||+|.+||+++..++......+++.+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d 255 (632)
T PRK07529 176 LAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGD 255 (632)
T ss_pred ccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCC
Confidence 0000 1123345666665543221 112234678999999999999999999999999998887777778889999
Q ss_pred EEEEecCccchhhhHHHH-HHhhhcCeeEEeccC------CHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCC
Q 008389 238 VYLWTLPMFHCNGWCYTW-SLAALCGTSICLRQV------TAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLP 310 (567)
Q Consensus 238 ~~~~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~~------~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~ 310 (567)
++++.+|++|.+++...+ ..+..|+++++..+. ....+++.++++++|++.++|+++..|++..... .. ++
T Consensus 256 ~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-~~-~~ 333 (632)
T PRK07529 256 TVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDG-HD-IS 333 (632)
T ss_pred EEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccC-CC-cc
Confidence 999999999999987554 445566666665431 1368899999999999999999999999875432 23 88
Q ss_pred chhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEe--
Q 008389 311 HVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVI-- 387 (567)
Q Consensus 311 ~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~-- 387 (567)
++|.+++||+++++++.+++++ +++++++.||+||++..+..+... .....+++|.|+|++ .++|+
T Consensus 334 slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~~svG~~~p~~-~v~i~~~ 402 (632)
T PRK07529 334 SLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPD----------GERRIGSVGLRLPYQ-RVRVVIL 402 (632)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCcc----------ccccCCCcccccCCc-eEEEEEc
Confidence 9999999999999999999985 599999999999997665443211 112347899999999 78885
Q ss_pred eCCCC---CccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecc
Q 008389 388 DTRTQ---QPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENIS 464 (567)
Q Consensus 388 d~~~~---~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~ 464 (567)
|++ | ++++.| +.|||+++|+.++.||++++......+.+|||+|||+|++++||++++.||.+|+|+.+|.+|+
T Consensus 403 d~~-g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~ 479 (632)
T PRK07529 403 DDA-GRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNID 479 (632)
T ss_pred CCC-CcccccCCCC--CceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEEC
Confidence 444 5 678877 7899999999999999986554433337899999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCC-CCCCceeecCc-ccCC
Q 008389 465 SVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPA-YWVPKSIVFGP-LPKT 542 (567)
Q Consensus 465 ~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~p~~i~~~~-lP~t 542 (567)
|.+||+.|.++|+|.+++|++.+++..|+.++++|++.++. ..+. +++++++++++++ +++|+.+.+++ ||+|
T Consensus 480 p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~-~~~~----~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t 554 (632)
T PRK07529 480 PAAIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGA-SATE----AELLAFARDHIAERAAVPKHVRILDALPKT 554 (632)
T ss_pred HHHHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCC-CCCH----HHHHHHHHHhcchhccCCcEEEEecCCCCC
Confidence 99999999999999999999999998899999999998876 4445 6788899999874 78999999888 9999
Q ss_pred CCccccHHHHHHHHHHc
Q 008389 543 ATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 543 ~~GKi~r~~l~~~~~~~ 559 (567)
++||++|+.|++.+.+.
T Consensus 555 ~~GKi~r~~Lr~~~~~~ 571 (632)
T PRK07529 555 AVGKIFKPALRRDAIRR 571 (632)
T ss_pred CCCcccHHHHHHHHHHH
Confidence 99999999999987653
No 14
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.1e-70 Score=587.06 Aligned_cols=517 Identities=20% Similarity=0.249 Sum_probs=397.6
Q ss_pred cCHHHHHhhhhhcCCCceeEEEC----C-----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHG----S-----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
.|+.++|++.++++||++|+.+. + .++||+||+++++++|+.|.+.|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 49999999999999999999842 1 35899999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCC
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGR 170 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (567)
+++|++++|+++.++.+++.++++.++++++|++.+....+.. .++.. ......++.++.............+.
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~---~~~~~---~~~l~~vi~~~~~~~~~~~~~~~~~~ 198 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFK---TCPNS---TEYMKTVVSFGGVSREQKEEAETFGL 198 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHH---hcccc---cccceEEEEeCCCChHHhhhhhhcCc
Confidence 9999999999999999999999999999999998765433322 11100 00234555554321100000000011
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh-----ccCCCcEEEEecCc
Q 008389 171 GAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW-----GMNEGAVYLWTLPM 245 (567)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~ 245 (567)
...++++++..............++|+++|+|||||||.||||.+||+++...+......+ ++.++|++++.+|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 199 VIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 1245666665432211112234578999999999999999999999999988876655443 57889999999999
Q ss_pred cchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC----------------------
Q 008389 246 FHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE---------------------- 303 (567)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~---------------------- 303 (567)
+|.+++......+..|+++++. ..++..+++.|++++||+++++|++++.+.+....
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFW-RGDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999987655556677776665 46899999999999999999999999988642100
Q ss_pred -----------CC-----------cCCCCchhhhhccCCCCCHHHHHHHHhc-CCeeeeccCCccCcCCcccccCCCCCC
Q 008389 304 -----------DT-----------ILPLPHVVHVNTAGAAPPPSVLHAMSQK-GFHVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
Q Consensus 304 -----------~~-----------~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~ 360 (567)
.. ....+++|.+++||+++++++.++++.+ ++++++.||+||+++..+.....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~---- 433 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPD---- 433 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccc----
Confidence 00 0001578999999999998876555555 58999999999987544322110
Q ss_pred CCChhhhhhhhccCCceeccccceeEeeC-C-CCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceE
Q 008389 361 SLPPETQARMKARQGVRFIGLEKLDVIDT-R-TQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLG 438 (567)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~-~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~ 438 (567)
.....+++|.|+|++ +++|+|. + .+.+++.+ +.|||+++|++++.|||++++.+.+.|.+|||+|||+|
T Consensus 434 ------~~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg 504 (666)
T PLN02614 434 ------ELDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVG 504 (666)
T ss_pred ------cCCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhccCCcccceEE
Confidence 011247899999999 8999983 3 24667776 78999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEeccccceee-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc-----------
Q 008389 439 VKHPDNYIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD----------- 506 (567)
Q Consensus 439 ~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~----------- 506 (567)
++|+||+|+++||.+|+|| .+|++|+|.+||+++.++|.|.+++|++..... .++|+|++..+.-
T Consensus 505 ~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~---~l~alvv~~~~~~~~~~~~~~~~~ 581 (666)
T PLN02614 505 EWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFES---FLVAIANPNQQILERWAAENGVSG 581 (666)
T ss_pred EEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcc---eEEEEEeCCHHHHHHHHHhcCCCc
Confidence 9999999999999999999 579999999999999999999999999987432 3889888765310
Q ss_pred c----hhhHHHHHHHHH----HH-HhcCCCCCCCceeecCccc-------CCCCccccHHHHHHHHHHc
Q 008389 507 K----SNEQQLAEDIMK----FC-RAKMPAYWVPKSIVFGPLP-------KTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 507 ~----~~~~~~~~~l~~----~l-~~~l~~~~~p~~i~~~~lP-------~t~~GKi~r~~l~~~~~~~ 559 (567)
. .+..++.+.+.+ .. ++.|+.+.+++.|.+.+-| .|+++|++|+.+.+.|++.
T Consensus 582 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~ 650 (666)
T PLN02614 582 DYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSV 650 (666)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHH
Confidence 0 001122333333 33 3569999999999977633 8999999999999998764
No 15
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.4e-70 Score=585.27 Aligned_cols=516 Identities=21% Similarity=0.235 Sum_probs=406.4
Q ss_pred ccCHHHHHhhhhhcCCCceeEEE---CC------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHh
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVH---GS------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFG 89 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~---~~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 89 (567)
..|+.++|+++++++|+++|+.+ .+ +.+||+||.++++++|+.|.+.|+++||+|+|+++|+++|+++++|
T Consensus 43 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 122 (651)
T PLN02736 43 IGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHA 122 (651)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 46899999999999999999953 11 4699999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccC
Q 008389 90 VPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALG 169 (567)
Q Consensus 90 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (567)
|+++|++++|+++.++.+++.++++.++++++|++.+..+.+......++ ..+.++.++.............+
T Consensus 123 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~~~~ 195 (651)
T PLN02736 123 CSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIP-------SVRLIVVVGGADEPLPSLPSGTG 195 (651)
T ss_pred HHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCC-------CceEEEEECCCchhhhhhhccCC
Confidence 99999999999999999999999999999999999877665554433222 34555555422110000000011
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchh
Q 008389 170 RGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCN 249 (567)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 249 (567)
.....+++++...........+..++++++|+|||||||.||||++||+++..++......+++.++|++++.+|++|.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~ 275 (651)
T PLN02736 196 VEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIY 275 (651)
T ss_pred cEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHH
Confidence 12345666665443222222335678999999999999999999999999999988888888899999999999999999
Q ss_pred hhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCC---------------------------
Q 008389 250 GWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPS--------------------------- 302 (567)
Q Consensus 250 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--------------------------- 302 (567)
++...+.++..|+++++.. .++..+++.|+++++|+++++|.+++.+.+...
T Consensus 276 ~~~~~~~~l~~G~~i~~~~-~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (651)
T PLN02736 276 ERVNQIVMLHYGVAVGFYQ-GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALEN 354 (651)
T ss_pred HHHHHHHHHHcCCEEEEeC-CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHc
Confidence 9987777777787776654 488899999999999999999999988765310
Q ss_pred -CCC-------------cCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhh
Q 008389 303 -EDT-------------ILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQ 367 (567)
Q Consensus 303 -~~~-------------~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~ 367 (567)
... ....+++|.+++||+++++++.+++.+ +++++++.||+||+++.++.....
T Consensus 355 ~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~----------- 423 (651)
T PLN02736 355 GKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG----------- 423 (651)
T ss_pred CCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC-----------
Confidence 000 000147899999999999999999984 589999999999997665543211
Q ss_pred hhhhccCCceeccccceeEeeCCCCCcc---CCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCC
Q 008389 368 ARMKARQGVRFIGLEKLDVIDTRTQQPV---PADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPD 443 (567)
Q Consensus 368 ~~~~~~~G~~~~~~~~~~i~d~~~~~~~---~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~ 443 (567)
....+++|.|+|++ +++|+|.+++... .++ +.|||+++||+++.|||++++.+.+.| .+|||+|||+|++++|
T Consensus 424 ~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~--~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~d 500 (651)
T PLN02736 424 DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPY--PRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPG 500 (651)
T ss_pred CCCCCccCCccCce-EEEEEEccccCcccCCCCC--CCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCC
Confidence 12347899999999 8999985433211 112 469999999999999999999999888 5899999999999999
Q ss_pred CcEEEeccccceeee-CceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCc----------cchhh--
Q 008389 444 NYIEIKDRSKDIIIS-GGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEV----------DKSNE-- 510 (567)
Q Consensus 444 g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~----------~~~~~-- 510 (567)
|++++.||.+|+||+ +|++|+|.+||+++.++|.|.+|+|++. ..++.++|+|+++++. ...+.
T Consensus 501 G~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~ 577 (651)
T PLN02736 501 GRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGIKYEDLKQ 577 (651)
T ss_pred CcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCCCccCHHH
Confidence 999999999999995 7999999999999999999999999983 2467899999987531 10111
Q ss_pred ----HHHHHHHHHHHH-----hcCCCCCCCceeecCc-cc------CCCCccccHHHHHHHHHHc
Q 008389 511 ----QQLAEDIMKFCR-----AKMPAYWVPKSIVFGP-LP------KTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 511 ----~~~~~~l~~~l~-----~~l~~~~~p~~i~~~~-lP------~t~~GKi~r~~l~~~~~~~ 559 (567)
.++.+.+.+.+. ++|+.+++|+.|.+++ .| +|++||++|+.+++.|.+.
T Consensus 578 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~ 642 (651)
T PLN02736 578 LCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKA 642 (651)
T ss_pred HhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHH
Confidence 112222222222 2599999999999877 54 7999999999999998764
No 16
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=5.6e-69 Score=566.60 Aligned_cols=507 Identities=29% Similarity=0.433 Sum_probs=424.8
Q ss_pred chhhhcccCHHHHHhhhhhcCCCceeEEECC------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHH
Q 008389 13 NAANYMALTPLWFLDRAATVHPTRTSVVHGS------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEA 86 (567)
Q Consensus 13 ~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~ 86 (567)
....|++.|+.++|++.++.+|+++|+++.+ +++||.||+++++++|+.|.+.|+++||+|+++++|+++++++
T Consensus 17 ~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~ 96 (547)
T PRK13295 17 AAGHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVL 96 (547)
T ss_pred cCCCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHH
Confidence 4556888999999999999999999999865 8999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccch-----HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCc
Q 008389 87 HFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF-----KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDP 161 (567)
Q Consensus 87 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 161 (567)
+|||+++|++++|+++.++.+++.++++.+++++++++++.. +.+.+...... ....++.++...
T Consensus 97 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--- 166 (547)
T PRK13295 97 YLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP-------ALRHVVVVGGDG--- 166 (547)
T ss_pred HHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC-------CcceEEEecCCC---
Confidence 999999999999999999999999999999999999987642 11222111111 334455444321
Q ss_pred ccchhccCCChHHHHHHHhcCC-------CCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccC
Q 008389 162 KDLKYALGRGAVEYEKFLQTGD-------PQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMN 234 (567)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 234 (567)
..++.+++.... +..........+++++++|||||||.||+|.++|+++..++......++++
T Consensus 167 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 236 (547)
T PRK13295 167 ----------ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLG 236 (547)
T ss_pred ----------ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCC
Confidence 112333332110 001111224568999999999999999999999999998888888888999
Q ss_pred CCcEEEEecCccchhhhHH-HHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchh
Q 008389 235 EGAVYLWTLPMFHCNGWCY-TWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVV 313 (567)
Q Consensus 235 ~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr 313 (567)
+++++++..|++|..|+.. .+.++..|+++++...+++..+++.++++++|++.++|+++..+.......... ++++|
T Consensus 237 ~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~ 315 (547)
T PRK13295 237 ADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRP-VSSLR 315 (547)
T ss_pred CCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCC-cccce
Confidence 9999999999999998765 455567788877777789999999999999999999999999998876554444 88999
Q ss_pred hhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCC
Q 008389 314 HVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQ 392 (567)
Q Consensus 314 ~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~ 392 (567)
.+++||+++++++.+++.+ +++++++.||+||++.+.+.+.... .......+|.|++++ .++|+|++ +
T Consensus 316 ~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~~-~ 384 (547)
T PRK13295 316 TFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDAD-G 384 (547)
T ss_pred EEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECCC-C
Confidence 9999999999999999884 5899999999999976544332111 012235789999999 89999986 8
Q ss_pred CccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHH
Q 008389 393 QPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMM 472 (567)
Q Consensus 393 ~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l 472 (567)
++++.| +.|||+++|+.++.||+++++.+... .+|||+|||+|+++++|++++.||.+|+|+.+|.+++|.+||+++
T Consensus 385 ~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l 461 (547)
T PRK13295 385 APLPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALL 461 (547)
T ss_pred CCCCCC--CCCeEEEEcCcccccccCCccccccC-CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHH
Confidence 888888 78999999999999999998887765 688999999999999999999999999999999999999999999
Q ss_pred hcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHh-cCCCCCCCceeecCc-ccCCCCccccHH
Q 008389 473 YLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRA-KMPAYWVPKSIVFGP-LPKTATGKIQKH 550 (567)
Q Consensus 473 ~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (567)
.+++.|.+++|++.+++..|+.+++++++.++. ..+. +++.+++++ .++.+++|..+.+++ ||+|.+||++|+
T Consensus 462 ~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~-~~~~----~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~ 536 (547)
T PRK13295 462 YRHPAIAQVAIVAYPDERLGERACAFVVPRPGQ-SLDF----EEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKF 536 (547)
T ss_pred HhCCCeeeEEEEeeecCCCCcEEEEEEEeCCCC-CCCH----HHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHH
Confidence 999999999999999988889999999987764 3344 578888886 799999999999888 999999999999
Q ss_pred HHHHHHHHc
Q 008389 551 VLRAKAKEM 559 (567)
Q Consensus 551 ~l~~~~~~~ 559 (567)
+|++++.+.
T Consensus 537 ~L~~~~~~~ 545 (547)
T PRK13295 537 RLREMLRGE 545 (547)
T ss_pred HHHHHHhcC
Confidence 999988764
No 17
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=2.9e-69 Score=577.22 Aligned_cols=510 Identities=23% Similarity=0.325 Sum_probs=413.0
Q ss_pred HHHHhhhhhcCCCceeEEECC------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 23 LWFLDRAATVHPTRTSVVHGS------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
+++|++++..+|+++|+++.+ +++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 60 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 139 (625)
T TIGR02188 60 YNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAI 139 (625)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 577888888899999999743 48999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF---------KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
++|+++.++.+++.++++.++++++|+++... ..+.+.....+. ....++.+........ .
T Consensus 140 ~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~----~ 209 (625)
T TIGR02188 140 HSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV------SVEHVLVVRRTGNPVP----W 209 (625)
T ss_pred EeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC------CccEEEEEcCCCCCcC----c
Confidence 99999999999999999999999999987532 222222221110 1334554443211100 0
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHH-HHHHhccCCCcEEEEecCcc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLS-VALIWGMNEGAVYLWTLPMF 246 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~ 246 (567)
.......+++++....... .......+++++|+|||||||.||+|+++|.+++..... ....++++++|++++..|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 288 (625)
T TIGR02188 210 VEGRDVWWHDLMAKASAYC-EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVG 288 (625)
T ss_pred cccccccHHHHHhhcCCCC-CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCch
Confidence 0112234566655432221 222356789999999999999999999999998755443 33456889999999999999
Q ss_pred chhhhHH-HHHHhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC--CcCCCCchhhhhccC
Q 008389 247 HCNGWCY-TWSLAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED--TILPLPHVVHVNTAG 319 (567)
Q Consensus 247 ~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~--~~~~l~~lr~i~~~G 319 (567)
|+.|..+ .+..+..|+++++... +++..+++.|+++++|++.++|++++.|.+..... ... ++++|.++++|
T Consensus 289 ~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~i~~~G 367 (625)
T TIGR02188 289 WITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHD-LSSLRLLGSVG 367 (625)
T ss_pred hhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCC-ccceeEEEEec
Confidence 9988765 4445667777777642 47899999999999999999999999998764321 223 78999999999
Q ss_pred CCCCHHHHHHHHhc----CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCcc
Q 008389 320 AAPPPSVLHAMSQK----GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPV 395 (567)
Q Consensus 320 ~~l~~~~~~~~~~~----~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~ 395 (567)
+++++++.+++.+. ++++++.||+||+++.+...... ......+++|.|++++ .++|+|++ |+++
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~~~~G~p~~g~-~~~i~d~~-g~~~ 436 (625)
T TIGR02188 368 EPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG---------ATPTKPGSATLPFFGI-EPAVVDEE-GNPV 436 (625)
T ss_pred CCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC---------CCCcCCCcccCCcCCc-eEEEECCC-CCCC
Confidence 99999999998854 37899999999998765433211 0112347899999999 89999965 8888
Q ss_pred C-CCCCceEEEEEec--ccccccccCCCccchhcc---cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHH
Q 008389 396 P-ADGKTIGEIVMSG--NVVMKGYLKNPKANEETF---ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVE 469 (567)
Q Consensus 396 ~-~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 469 (567)
+ .+ +.|||++++ |+++.|||++++.+...+ .+|||+|||+|++++||++++.||+||+||++|++|+|.+||
T Consensus 437 ~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE 514 (625)
T TIGR02188 437 EGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIE 514 (625)
T ss_pred CCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHH
Confidence 8 66 789999999 589999999998776655 378999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCcccc
Q 008389 470 NMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQ 548 (567)
Q Consensus 470 ~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (567)
++|.++|.|.+++|++.+++..|+.++++|+++++... .+++.++|+++++++|+.++.|+.|++++ ||+|++||++
T Consensus 515 ~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~ 592 (625)
T TIGR02188 515 SALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKDGYEP--DDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIM 592 (625)
T ss_pred HHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCCCCCC--CHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccch
Confidence 99999999999999999999889999999999887522 22345789999999999999999999888 9999999999
Q ss_pred HHHHHHHHHHc
Q 008389 549 KHVLRAKAKEM 559 (567)
Q Consensus 549 r~~l~~~~~~~ 559 (567)
|+.|++.+...
T Consensus 593 r~~l~~~~~~~ 603 (625)
T TIGR02188 593 RRLLRKIAAGE 603 (625)
T ss_pred HHHHHHHHcCC
Confidence 99999987654
No 18
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.9e-69 Score=565.71 Aligned_cols=498 Identities=18% Similarity=0.213 Sum_probs=398.3
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECC-ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGS-TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
.+...++.+.|.+.++++|+++|+.+.+ +++||+||.+++.++|+.|.+. +||+|+++++|++++++++|||+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G 91 (539)
T PRK06334 15 LRSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSG 91 (539)
T ss_pred cCcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcC
Confidence 3456789999999999999999998866 7999999999999999999873 89999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++++|+++.++.+++.++++.+++++++++.+....+.+....... ....++.+++... ...
T Consensus 92 ~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~------------~~~ 153 (539)
T PRK06334 92 KIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAE------YPFSLIYMEEVRK------------ELS 153 (539)
T ss_pred CeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhcccc------ccccEEEEehhhh------------hcc
Confidence 9999999999999999999999999999987765554432111000 0112333322100 000
Q ss_pred HHHHHhc----CCCC-----CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCc
Q 008389 175 YEKFLQT----GDPQ-----FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPM 245 (567)
Q Consensus 175 ~~~~l~~----~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~ 245 (567)
+.+.+.. ..+. ........++++++++|||||||.||+|.+||+++..+.......++++.+|++++.+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~ 233 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPP 233 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecch
Confidence 0010000 0000 000123467899999999999999999999999999888777777889999999999999
Q ss_pred cchhhhHH-HHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCC
Q 008389 246 FHCNGWCY-TWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPP 323 (567)
Q Consensus 246 ~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~ 323 (567)
+|.+|+.. .+..+..|+++++.. .+++..+++.|+++++|++.++|+++..|++........ ++++|.+++||++++
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~i~~gG~~l~ 312 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESC-LPSLRFVVIGGDAFK 312 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccc-cccccEEEECCccCC
Confidence 99999865 455566777776654 478999999999999999999999999998765444444 889999999999999
Q ss_pred HHHHHHHHhc--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCc
Q 008389 324 PSVLHAMSQK--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKT 401 (567)
Q Consensus 324 ~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~ 401 (567)
+++.+++.+. ++++++.||+||++.+++...... ......+|.|++++ +++|+|++++.+++.| +
T Consensus 313 ~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~ 379 (539)
T PRK06334 313 DSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNS----------PKHESCVGMPIRGM-DVLIVSEETKVPVSSG--E 379 (539)
T ss_pred HHHHHHHHHHCCCCeEEecccccccCceEEeccCCC----------CCCCCcCceecCCC-EEEEEcCCCCccCCCC--c
Confidence 9999999854 689999999999976655432110 11235689999999 8999998878999988 8
Q ss_pred eEEEEEecccccccccCCCccchhcc--cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCce
Q 008389 402 IGEIVMSGNVVMKGYLKNPKANEETF--ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVL 479 (567)
Q Consensus 402 ~Gei~v~~~~~~~gy~~~~~~~~~~~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~ 479 (567)
.|||+++|+.++.||+++++.+.... .+|||+|||+|+++++|++++.||.+|+||++|++|+|.|||++|.++|+|.
T Consensus 380 ~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~ 459 (539)
T PRK06334 380 TGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQN 459 (539)
T ss_pred eEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCc
Confidence 89999999999999999988644322 3679999999999999999999999999999999999999999999999998
Q ss_pred e------eEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc-CCCCCCCceeecCc-ccCCCCccccHHH
Q 008389 480 E------ASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK-MPAYWVPKSIVFGP-LPKTATGKIQKHV 551 (567)
Q Consensus 480 ~------~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~ 551 (567)
+ ++|++.+++. ..++++++. . .+. ++++++++++ ++.|+.|..+.+++ ||+|++||++|+.
T Consensus 460 ~~~~~~~~~v~~~~~~~--~~~~~~~~~--~---~~~----~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~ 528 (539)
T PRK06334 460 AADHAGPLVVCGLPGEK--VRLCLFTTF--P---TSI----SEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCS 528 (539)
T ss_pred cccccCceEEEcCCCCc--eEEEEEEec--c---CCh----HHHHHHHHhcCCcccccchheeeecccccccCCcccHHH
Confidence 7 6777776432 234444442 1 122 5678888886 78999999998888 9999999999999
Q ss_pred HHHHHHHc
Q 008389 552 LRAKAKEM 559 (567)
Q Consensus 552 l~~~~~~~ 559 (567)
|++.....
T Consensus 529 L~~~~~~~ 536 (539)
T PRK06334 529 LNALAKSL 536 (539)
T ss_pred HHHHHHHh
Confidence 99987654
No 19
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.6e-69 Score=574.83 Aligned_cols=510 Identities=23% Similarity=0.322 Sum_probs=412.7
Q ss_pred HHHHhhhhhcCCCceeEEECC------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 23 LWFLDRAATVHPTRTSVVHGS------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.++|+++++++|+++|+++.+ +++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 467888888999999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF---------KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
++|+++.++.+++.++++.++++++|+++... +.+.+.....+ ....++.+........ .
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~----~ 218 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP-------SVEKVIVVRRTGGDVD----W 218 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC-------CccEEEEEcCCCCCcC----c
Confidence 99999999999999999999999999976542 22222222111 3344555543211100 0
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHH-HHHHhccCCCcEEEEecCcc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLS-VALIWGMNEGAVYLWTLPMF 246 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~ 246 (567)
.......+.+++...... ........+++++|+|||||||.||+|.++|++++.+... ....++++++|++++..|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 297 (637)
T PRK00174 219 VEGRDLWWHELVAGASDE-CEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVG 297 (637)
T ss_pred CCCCcccHHHHHhhcCCC-CCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCch
Confidence 011233456655433221 2223356789999999999999999999999998765443 33446888999999999999
Q ss_pred chhhhHH-HHHHhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC-CcCCCCchhhhhccCC
Q 008389 247 HCNGWCY-TWSLAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED-TILPLPHVVHVNTAGA 320 (567)
Q Consensus 247 ~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-~~~~l~~lr~i~~~G~ 320 (567)
|..++.+ .+.++..|+++++... +++..+++.|+++++|++.++|++++.|++..... ....+++||.++++|+
T Consensus 298 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge 377 (637)
T PRK00174 298 WVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGE 377 (637)
T ss_pred HhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCC
Confidence 9988764 4445667777777642 47899999999999999999999999998764321 1122789999999999
Q ss_pred CCCHHHHHHHHhc-C---CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccC
Q 008389 321 APPPSVLHAMSQK-G---FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVP 396 (567)
Q Consensus 321 ~l~~~~~~~~~~~-~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 396 (567)
+++++..+++.+. + +++++.||+||+++.+....... .....+++|.|++++ .++|+|++ |++++
T Consensus 378 ~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~vG~p~~g~-~~~i~d~~-g~~~~ 446 (637)
T PRK00174 378 PINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA---------TPLKPGSATRPLPGI-QPAVVDEE-GNPLE 446 (637)
T ss_pred CCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC---------CCcCCCcccCCCCCc-eEEEECCC-CCCCC
Confidence 9999999988753 3 78999999999987654322110 011236799999999 89999976 88998
Q ss_pred CCCCceEEEEEec--ccccccccCCCccchhcc---cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHH
Q 008389 397 ADGKTIGEIVMSG--NVVMKGYLKNPKANEETF---ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENM 471 (567)
Q Consensus 397 ~~~~~~Gei~v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (567)
.+ +.|||+++| +.++.|||++++.+...+ .+|||+|||+|++++||++++.||.||+||++|++|+|.+||++
T Consensus 447 ~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~ 524 (637)
T PRK00174 447 GG--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESA 524 (637)
T ss_pred CC--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHH
Confidence 87 789999999 689999999998776655 47899999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHH
Q 008389 472 MYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKH 550 (567)
Q Consensus 472 l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (567)
|.++|+|.+++|++.+++..|+.++++|++.++.. .+ +++.++|+++++++|+.++.|..+.+++ ||+|++||++|+
T Consensus 525 l~~~~~V~~~~Vvg~~~~~~g~~~~a~vv~~~~~~-~~-~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~ 602 (637)
T PRK00174 525 LVAHPKVAEAAVVGRPDDIKGQGIYAFVTLKGGEE-PS-DELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRR 602 (637)
T ss_pred HHhCCCcceEEEEeeEcCCCCeEEEEEEEECCCCC-CC-HHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHH
Confidence 99999999999999999988999999999987752 22 3344789999999999999999999888 999999999999
Q ss_pred HHHHHHHHc
Q 008389 551 VLRAKAKEM 559 (567)
Q Consensus 551 ~l~~~~~~~ 559 (567)
.|++.....
T Consensus 603 ~L~~~~~~~ 611 (637)
T PRK00174 603 ILRKIAEGE 611 (637)
T ss_pred HHHHHHcCC
Confidence 999987654
No 20
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-68 Score=561.96 Aligned_cols=491 Identities=25% Similarity=0.365 Sum_probs=414.6
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
++++.++|.++++++|+++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 47899999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|+++.++.+++.++++.++++++|++.+....+........ ....++.+.... ....++.+
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------------~~~~~~~~ 182 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCP-------QATRIVAWTDED------------HDLTVEVL 182 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhcc-------ccceEEEecCCc------------ccccHHHH
Confidence 99999999999999999999999999877655443322111 122233332211 01233333
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
....... ......++.++++|||||||.||+|.++|+++..........+.+..+++++...|++|.+|+...+..+
T Consensus 183 ~~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l 259 (537)
T PRK13382 183 IAAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAA 259 (537)
T ss_pred hhccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHH
Confidence 3322111 1123457889999999999999999999999888877777778888999999999999999998778888
Q ss_pred hhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHHHHh-cCC
Q 008389 259 ALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGF 335 (567)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~ 335 (567)
..|+++++...+++..+++.|+++++|++.++|++++.+++.... .... ++++|.+++||+++++++.+.+.+ ++.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~gG~~l~~~~~~~~~~~~~~ 338 (537)
T PRK13382 260 SLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYS-GRSLRFAAASGSRMRPDVVIAFMDQFGD 338 (537)
T ss_pred hcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCC-ccceeEEEEcCCCCCHHHHHHHHHHcCC
Confidence 888888887788999999999999999999999999999876432 1222 578999999999999999999885 588
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKG 415 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~g 415 (567)
++++.||+||++.+++.+.. ......+++|.|++++ .++|+|++ +++++.| +.|||+++|+.++.|
T Consensus 339 ~i~~~YG~TE~~~~~~~~~~----------~~~~~~~~vG~p~~~~-~~~i~d~~-~~~~~~g--~~GEl~v~g~~~~~g 404 (537)
T PRK13382 339 VIYNNYNATEAGMIATATPA----------DLRAAPDTAGRPAEGT-EIRILDQD-FREVPTG--EVGTIFVRNDTQFDG 404 (537)
T ss_pred cEEecccccccCcceecChh----------HhccCCCCccccCcCc-EEEEECCC-CCCCCCC--CeeEEEEEcCCcccC
Confidence 99999999999866553321 1112346899999999 89999987 8888888 789999999999999
Q ss_pred ccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcc
Q 008389 416 YLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESP 495 (567)
Q Consensus 416 y~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~ 495 (567)
|+ ++.+. .|.+|||+|||+++++++|++++.||.+|+|+.+|++|+|.+||..+.++|+|.+++|++.++...|+.+
T Consensus 405 Y~--~~~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~ 481 (537)
T PRK13382 405 YT--SGSTK-DFHDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRL 481 (537)
T ss_pred cc--ccchh-hccCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEE
Confidence 98 44433 4568999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred eEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHH
Q 008389 496 CAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRA 554 (567)
Q Consensus 496 ~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (567)
+++|++.++. ..+. ++++++++++|+.+++|..+.+++ +|+|++||++|++|++
T Consensus 482 ~a~vv~~~~~-~~~~----~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 482 AAFVVLKPGA-SATP----ETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEEEEECCCC-CCCH----HHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 9999987765 3344 678999999999999999999887 9999999999999864
No 21
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-68 Score=560.04 Aligned_cols=539 Identities=59% Similarity=1.039 Sum_probs=442.2
Q ss_pred ccccccchhhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHH
Q 008389 7 IDDLPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEA 86 (567)
Q Consensus 7 ~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~ 86 (567)
+..+.....+.-++++.++|++.++.+|+++|+.+.+..+||+||.+++.++|..|.+.|+++||+|+++++|+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~ 84 (545)
T PRK08162 5 EQGLDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEA 84 (545)
T ss_pred hcccCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHH
Confidence 33444555556678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchh
Q 008389 87 HFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKY 166 (567)
Q Consensus 87 ~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (567)
+|||+++|++++|+++.++.+++.++++.++++.++++.+..+.+.+.....+ ...++.+........ .
T Consensus 85 ~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~ 153 (545)
T PRK08162 85 HFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLP--------GPKPLVIDVDDPEYP---G 153 (545)
T ss_pred HHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCC--------CCceEEEecCccccc---c
Confidence 99999999999999999999999999999999999999988776655433222 122233322111000 0
Q ss_pred ccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCcc
Q 008389 167 ALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMF 246 (567)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~ 246 (567)
....+..+++.++....+...+..+.+.+++++++|||||||.||+|.++|+++...+......+.+..++++++.+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 233 (545)
T PRK08162 154 GRFIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMF 233 (545)
T ss_pred CCCcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcH
Confidence 01123345666665544333333334556899999999999999999999999877766666667788899999999999
Q ss_pred chhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHH
Q 008389 247 HCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSV 326 (567)
Q Consensus 247 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~ 326 (567)
|.+++...+...+.+++.++...+++..+++.++++++|++.++|+++..|++........ +...+.++++|+.+++..
T Consensus 234 h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~~~~~g~~~~~~~ 312 (545)
T PRK08162 234 HCNGWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAG-IDHPVHAMVAGAAPPAAV 312 (545)
T ss_pred hhhhHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccC-CccceEEEECCCCCCHHH
Confidence 9999987777777888888888889999999999999999999999999999765443323 556667789999999999
Q ss_pred HHHHHhcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEE
Q 008389 327 LHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIV 406 (567)
Q Consensus 327 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~ 406 (567)
.+.+.+.++++++.||+||+++.+..+.....+...+...........|.+.+....+.|+|++++.+++.++.+.|||+
T Consensus 313 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~ 392 (545)
T PRK08162 313 IAKMEEIGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIM 392 (545)
T ss_pred HHHHHHhCCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEE
Confidence 99998889999999999999777666544333332222222222355677766554688999877888887554679999
Q ss_pred EecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 407 MSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 407 v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
++|+.++.||+++++.+...|.+|||+|||+|+++++|.+++.||.+|+++++|.+|+|.+||..|.++++|.+++|++.
T Consensus 393 v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~ 472 (545)
T PRK08162 393 FRGNIVMKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAK 472 (545)
T ss_pred EecCcchhhhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCcccCCCCccccHHHHHHHHHHcCCc
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGPLPKTATGKIQKHVLRAKAKEMGPV 562 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~lP~t~~GKi~r~~l~~~~~~~~~~ 562 (567)
+++..++.+++++++.++. ..+. +++++++++.|+.+.+|..+.+.++|+|++||++|+.|++++.++...
T Consensus 473 ~~~~~~~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~~~~~~iP~t~~gK~~r~~l~~~~~~l~~~ 543 (545)
T PRK08162 473 PDPKWGEVPCAFVELKDGA-SATE----EEIIAHCREHLAGFKVPKAVVFGELPKTSTGKIQKFVLREQAKSLKAI 543 (545)
T ss_pred eccccCceEEEEEEeCCCC-CCCH----HHHHHHHHHhcccccCCcEEEecccCCCCCcCCcHHHHHHHHhhhhhh
Confidence 9887788899999988765 3344 688999999999999999998767999999999999999998877543
No 22
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-68 Score=563.03 Aligned_cols=516 Identities=28% Similarity=0.397 Sum_probs=430.5
Q ss_pred hhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHc-cCCCCCEEEEEcCChHHHHHHHHhhhhc
Q 008389 15 ANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKR-SIGLGCTVAIIAPNIPAIYEAHFGVPMA 93 (567)
Q Consensus 15 ~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 93 (567)
+..|..|+.++|.+.++++|+++|+++.++++||+||.+++.++|..|.+. |+++||+|+++++|++++++++|||+++
T Consensus 5 ~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 84 (546)
T PRK08314 5 LTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRA 84 (546)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 346678999999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred CCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcc-----------
Q 008389 94 GAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPK----------- 162 (567)
Q Consensus 94 G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------- 162 (567)
|++++|+++..+.+++.++++.+++++++++.+....+......+ ....++..........
T Consensus 85 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 85 NAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--------RLRHVIVAQYSDYLPAEPEIAVPAWLR 156 (546)
T ss_pred CcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--------CcceEEEecchhhcccccccCcccccc
Confidence 999999999999999999999999999999988766554432211 1222322211000000
Q ss_pred ---cchhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEE
Q 008389 163 ---DLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVY 239 (567)
Q Consensus 163 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~ 239 (567)
........+...+++.+..... ........+++++++|||||||.||+|.++|++++.++......++++.+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 234 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVV 234 (546)
T ss_pred cccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceE
Confidence 0000011233456665543221 12233567899999999999999999999999999988888888889999999
Q ss_pred EEecCccchhhhHHHH-HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhcc
Q 008389 240 LWTLPMFHCNGWCYTW-SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTA 318 (567)
Q Consensus 240 ~~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~ 318 (567)
++.+|++|.+|+...+ .++..|+++++.+.+++..+++.++++++|++.++|+++..++......... ++++|.+++|
T Consensus 235 l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~-~~~l~~~~~g 313 (546)
T PRK08314 235 LAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERD-LSSLRYIGGG 313 (546)
T ss_pred EEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccC-chhhheeeec
Confidence 9999999999986544 5567788888888889999999999999999999999999998765444444 7899999999
Q ss_pred CCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCC
Q 008389 319 GAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPA 397 (567)
Q Consensus 319 G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 397 (567)
|+++++++.+++.+ ++.++++.||+||++......... ......+|.|++++ .++|+|++++.+++.
T Consensus 314 G~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~ 381 (546)
T PRK08314 314 GAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPP 381 (546)
T ss_pred cccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCC
Confidence 99999999999885 589999999999997655432210 11236789999999 899999888999998
Q ss_pred CCCceEEEEEecccccccccCCCccchhccc----CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHh
Q 008389 398 DGKTIGEIVMSGNVVMKGYLKNPKANEETFA----NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMY 473 (567)
Q Consensus 398 ~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 473 (567)
+ +.|||+++|++++.||+++++.+...|. ++||+|||+|+++++|.+++.||.||+|+++|.+|+|.+||+++.
T Consensus 382 g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~ 459 (546)
T PRK08314 382 G--EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY 459 (546)
T ss_pred C--CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH
Confidence 8 7899999999999999999988887763 359999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEEEEeecCCCCCcceEEEEEcCCcc-chhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHH
Q 008389 474 LHPAVLEASVVARADERWGESPCAFVTLKPEVD-KSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHV 551 (567)
Q Consensus 474 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~ 551 (567)
++++|.+++|++.++...++.++++++..++.. ..+. ++++++++++|+.+++|..+++++ ||+|++||++|+.
T Consensus 460 ~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~----~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~ 535 (546)
T PRK08314 460 KHPAIQEACVIATPDPRRGETVKAVVVLRPEARGKTTE----EEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQ 535 (546)
T ss_pred hCcchheEEEEeCCCcccCceeEEEEEECCCCCCCCCH----HHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHH
Confidence 999999999999999888899999999887642 2223 678999999999999999999888 9999999999999
Q ss_pred HHHHHHHc
Q 008389 552 LRAKAKEM 559 (567)
Q Consensus 552 l~~~~~~~ 559 (567)
|++...+.
T Consensus 536 L~~~~~~~ 543 (546)
T PRK08314 536 LQEQEKAR 543 (546)
T ss_pred HHHHHhhh
Confidence 99877665
No 23
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-68 Score=557.84 Aligned_cols=490 Identities=28% Similarity=0.431 Sum_probs=418.8
Q ss_pred CHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 21 TPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 21 t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
.+.+.|+++|+.+||++|+++.++++||.||+++++++|+.|++ .|+.+||+|+++++|++++++++|||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 46789999999999999999999999999999999999999985 79999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFL 179 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (567)
+++.++.+++..+++.+++++++++++..+.+.+..... ....++.+.+ ++++.
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~------------------~~~~~ 136 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS--------YVQRVISITS------------------LKEIE 136 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhcc--------CcceEEEecc------------------hHhhh
Confidence 999999999999999999999999887655544321111 1223333321 11112
Q ss_pred hcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHH-HHHh
Q 008389 180 QTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYT-WSLA 258 (567)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~-~~~~ 258 (567)
..... ...+...+++++++|||||||.||+|.++|.++..+.......+++..+|++++.+|++|.+|+... +..+
T Consensus 137 ~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l 213 (496)
T PRK06839 137 DRKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTL 213 (496)
T ss_pred ccCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHH
Confidence 11111 1123456789999999999999999999999998777766677788999999999999999998654 4455
Q ss_pred hhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeee
Q 008389 259 ALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVT 338 (567)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~ 338 (567)
..|+++++...+++..+++.++++++|++.++|++++.+++........ ++++|.+++||+++++++.+.+.+.+++++
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~ 292 (496)
T PRK06839 214 FAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTN-LQSVRWFYNGGAPCPEELMREFIDRGFLFG 292 (496)
T ss_pred hcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCC-CcccceEEECCCCCCHHHHHHHHHhCCeeE
Confidence 6677777777889999999999999999999999999999876544444 889999999999999999999998899999
Q ss_pred eccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccC
Q 008389 339 HTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLK 418 (567)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~ 418 (567)
+.||+||++..+...... ......+++|.|++++ .++|+|++ +..++.| +.|||+++|+.++.||++
T Consensus 293 ~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~p~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy~~ 359 (496)
T PRK06839 293 QGFGMTETSPTVFMLSEE---------DARRKVGSIGKPVLFC-DYELIDEN-KNKVEVG--EVGELLIRGPNVMKEYWN 359 (496)
T ss_pred eeccCCCCCcceEecccc---------cccccCCCCcccCCCc-eEEEECCC-cCCCCCC--CceEEEEECCCcchhhcC
Confidence 999999998655433211 1112347899999999 89999988 6678887 789999999999999999
Q ss_pred CCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEE
Q 008389 419 NPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAF 498 (567)
Q Consensus 419 ~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~ 498 (567)
+++.+...+.+|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.+.++|+|.+++|++.++...|+.++++
T Consensus 360 ~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~ 439 (496)
T PRK06839 360 RPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAF 439 (496)
T ss_pred ChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEE
Confidence 99999888899999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 499 VTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 499 v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
|+++++. ..+. ++++++++++|+.+++|..+++++ +|+|.+||++|++|+++.++
T Consensus 440 v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 440 IVKKSSS-VLIE----KDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EEECCCC-CCCH----HHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 9988765 3344 678999999999999999999888 99999999999999988764
No 24
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-68 Score=564.73 Aligned_cols=525 Identities=25% Similarity=0.339 Sum_probs=431.2
Q ss_pred cccccchhhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHH
Q 008389 8 DDLPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAH 87 (567)
Q Consensus 8 ~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~ 87 (567)
..|...+.+.+++|+.++++++++++|+++|+++.++.+||.||+++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 20 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~ 99 (573)
T PRK05605 20 APWTPHDLDYGDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAF 99 (573)
T ss_pred CCCCCcccCCCcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 33444444555679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcc-----
Q 008389 88 FGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPK----- 162 (567)
Q Consensus 88 lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----- 162 (567)
+||+++|++++|++|.++.+++.++++.++++++|++++....+.+..... ....++.++.......
T Consensus 100 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~ 171 (573)
T PRK05605 100 YAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT--------PLETIVSVNMIAAMPLLQRLA 171 (573)
T ss_pred HHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc--------ccceeEeeecccccccccccc
Confidence 999999999999999999999999999999999999887665554432211 1222333221100000
Q ss_pred ------------cchhccCCChHHHHHHHhcCCCCC---CCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHH
Q 008389 163 ------------DLKYALGRGAVEYEKFLQTGDPQF---DWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSV 227 (567)
Q Consensus 163 ------------~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~ 227 (567)
+.......+...|++++....... ........+++++++|||||||.||+|.++|+++..++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 251 (573)
T PRK05605 172 LRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQG 251 (573)
T ss_pred cccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHH
Confidence 000001223445666655422110 11123457899999999999999999999999998777654
Q ss_pred HHHhc-c-CCCcEEEEecCccchhhhHHHH-HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC
Q 008389 228 ALIWG-M-NEGAVYLWTLPMFHCNGWCYTW-SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED 304 (567)
Q Consensus 228 ~~~~~-~-~~~d~~~~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~ 304 (567)
...+. + ..++++++.+|++|.+|+...+ ..+..|+++++....++..+++.++++++|++.++|++++.+.+.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~ 331 (573)
T PRK05605 252 KAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEER 331 (573)
T ss_pred HhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCcccc
Confidence 44332 2 3478999999999999986544 4566788877777889999999999999999999999999999876655
Q ss_pred CcCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccc
Q 008389 305 TILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEK 383 (567)
Q Consensus 305 ~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 383 (567)
... ++++|.+++||+++++++.+.+.+ .+.++++.||+||+++++..+.... ....+.+|.|++++ .
T Consensus 332 ~~~-~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~ 399 (573)
T PRK05605 332 GVD-LSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-E 399 (573)
T ss_pred CCC-chhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-E
Confidence 555 889999999999999999999885 4889999999999987665432211 12236789999999 8
Q ss_pred eeEeeCCC-CCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCcee
Q 008389 384 LDVIDTRT-QQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGEN 462 (567)
Q Consensus 384 ~~i~d~~~-~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~ 462 (567)
++|+|+++ +.+++.+ +.|||+++|+.++.||++++..+...|.+|||+|||+|+++++|.+++.||.+|+++.+|++
T Consensus 400 ~~i~d~~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~ 477 (573)
T PRK05605 400 VRIVDPEDPDETMPDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFN 477 (573)
T ss_pred EEEEcCCCCCccCCCC--CeeEEEEecCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEE
Confidence 99999886 6788877 78999999999999999999999999989999999999999999999999999999999999
Q ss_pred cchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccC
Q 008389 463 ISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPK 541 (567)
Q Consensus 463 v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~ 541 (567)
|+|.+||+++..++.|.+++|++.++...++.+++++++.++. ..+. ++++++++++|+.+++|..+++++ +|+
T Consensus 478 v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~~~~iP~ 552 (573)
T PRK05605 478 VYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGA-ALDP----EGLRAYCREHLTRYKVPRRFYHVDELPR 552 (573)
T ss_pred ECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCC-CCCH----HHHHHHHHHhCccccCCcEEEEeccCCC
Confidence 9999999999999999999999999888889999999988764 3444 788999999999999999999887 999
Q ss_pred CCCccccHHHHHHHHHHc
Q 008389 542 TATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 542 t~~GKi~r~~l~~~~~~~ 559 (567)
|++||++|++|++++.+.
T Consensus 553 t~~GKi~r~~L~~~~~~~ 570 (573)
T PRK05605 553 DQLGKVRRREVREELLEK 570 (573)
T ss_pred CCcccccHHHHHHHHHHH
Confidence 999999999999988654
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-68 Score=566.80 Aligned_cols=504 Identities=24% Similarity=0.368 Sum_probs=420.5
Q ss_pred cCHH-HHHhhhhh-cCCCceeEEECC----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhc
Q 008389 20 LTPL-WFLDRAAT-VHPTRTSVVHGS----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMA 93 (567)
Q Consensus 20 ~t~~-~~l~~~a~-~~p~~~a~~~~~----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 93 (567)
+++. +++++++. .+|+++|+.+.+ +++||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 4554 68888876 579999998853 68999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChH
Q 008389 94 GAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAV 173 (567)
Q Consensus 94 G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (567)
|++++|+++.++.+++.++++.+++++++++......... ..++ ....++.++.... ...+..
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~--------~~~~~~ 184 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLP-------SLKHVLLVGEDVE--------EGPGTL 184 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCC-------CceEEEEECCCcC--------CCcCcc
Confidence 9999999999999999999999999999998776443221 0111 2344555543211 112334
Q ss_pred HHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH
Q 008389 174 EYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY 253 (567)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (567)
.+.+++....... ...+..++++++++|||||||.||+|.++|+++..........+++.++|++++..|++|.+|+..
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~ 263 (570)
T PRK04319 185 DFNALMEQASDEF-DIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSY 263 (570)
T ss_pred CHHHHHhhcCCcC-CccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchH
Confidence 5666665433322 122345688999999999999999999999999988877777788999999999999999888764
Q ss_pred -HHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHH
Q 008389 254 -TWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHA 329 (567)
Q Consensus 254 -~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~ 329 (567)
.+.++..|+++++.. .+++..+++.|+++++|+++++|++++.+.+.... .... ++++|.++++|+++++++.++
T Consensus 264 ~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~ 342 (570)
T PRK04319 264 GIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYD-LSSLRHILSVGEPLNPEVVRW 342 (570)
T ss_pred HHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCC-cccceEEEEcccCCCHHHHHH
Confidence 455566777777664 57899999999999999999999999999875432 2223 789999999999999999999
Q ss_pred HHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEe
Q 008389 330 MSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMS 408 (567)
Q Consensus 330 ~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~ 408 (567)
+.+ ++.++++.||+||+++.+...... .....+++|.|+|++ +++|+|++ +.+++.| +.|||+++
T Consensus 343 ~~~~~g~~i~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~p~~g~-~~~i~d~~-~~~~~~g--~~Gel~i~ 408 (570)
T PRK04319 343 GMKVFGLPIHDNWWMTETGGIMIANYPA----------MDIKPGSMGKPLPGI-EAAIVDDQ-GNELPPN--RMGNLAIK 408 (570)
T ss_pred HHHHhCCCeEeceeecccCCEEEecCCC----------CCCCCCcCcCCCCCC-EEEEECCC-CCCCCCC--CceEEEEc
Confidence 885 589999999999997765432111 011236899999999 89999976 7888887 89999999
Q ss_pred c--ccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 409 G--NVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 409 ~--~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
| +.++.||+++++.+...|.+|||+|||+|+++++|+++++||.+|+|+.+|++|+|.+||+.+.++|.|.+++|++.
T Consensus 409 ~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~ 488 (570)
T PRK04319 409 KGWPSMMRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGK 488 (570)
T ss_pred CCCChHHhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecc
Confidence 7 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
+++..|+.+++++++.++... .+.+.++++++++++|+.|++|..+++++ ||+|++||++|++|+++..+
T Consensus 489 ~~~~~g~~~~a~v~~~~~~~~--~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~ 559 (570)
T PRK04319 489 PDPVRGEIIKAFVALRPGYEP--SEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWELG 559 (570)
T ss_pred cCcCCceEEEEEEEECCCCCC--CHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHhC
Confidence 998889999999998876421 23445789999999999999999999888 99999999999999998754
No 26
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-68 Score=570.15 Aligned_cols=517 Identities=22% Similarity=0.271 Sum_probs=411.7
Q ss_pred HHHHhhhhhcCCCceeEEEC------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 23 LWFLDRAATVHPTRTSVVHG------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 23 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.++|++++..+|+++|+++. .+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 135 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAI 135 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcE
Confidence 67888888889999999973 368999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccc---------hHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEY---------FKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
++|+++.++.+++.++++.++++++|+++.. .+.+.+...... .....++.++....... .
T Consensus 136 ~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~~~~~~~~----~ 205 (629)
T PRK10524 136 HSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQ------HKPRHVLLVDRGLAPMA----R 205 (629)
T ss_pred EEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcC------CCCCEEEEEeCCCCCcC----c
Confidence 9999999999999999999999999997642 233333322211 02345555543211100 0
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHH-HHHHhccCCCcEEEEecCcc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLS-VALIWGMNEGAVYLWTLPMF 246 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~ 246 (567)
.......+.++.........+....+.+++++++|||||||.||+|.++|.++...... ....++++++|++++..|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 285 (629)
T PRK10524 206 VAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIG 285 (629)
T ss_pred ccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCC
Confidence 11122345555543322211222245689999999999999999999999987654433 34456889999999999999
Q ss_pred chhhhHHH-HHHhhhcCeeEEec----cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccC
Q 008389 247 HCNGWCYT-WSLAALCGTSICLR----QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAG 319 (567)
Q Consensus 247 ~~~g~~~~-~~~~~~g~~~~~~~----~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G 319 (567)
|..++.+. +..++.|+++++.. .+++..+++.|+++++|++.++|+.++.+.+.... .... ++++|.++++|
T Consensus 286 ~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~i~~~G 364 (629)
T PRK10524 286 WVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHD-LSSLRALFLAG 364 (629)
T ss_pred eeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccC-hhheeEEEEeC
Confidence 98887554 44556677776664 35789999999999999999999999998875432 2233 78999999999
Q ss_pred CCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCC
Q 008389 320 AAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPAD 398 (567)
Q Consensus 320 ~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~ 398 (567)
+++++++.+++.+ +++++++.||+||+++.+........ ......+++|.|++++ .++|+|+++|++++.|
T Consensus 365 e~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~-------~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~g 436 (629)
T PRK10524 365 EPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVE-------DRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGPN 436 (629)
T ss_pred CCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcc-------cCcCCCCCcccCcCCc-eEEEEeCCCCCCCCCC
Confidence 9999999999885 58999999999999754332211100 0112346889999999 8999998669999888
Q ss_pred CCceEEEEEecc---cccccccCCCccchhcc----cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHH
Q 008389 399 GKTIGEIVMSGN---VVMKGYLKNPKANEETF----ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENM 471 (567)
Q Consensus 399 ~~~~Gei~v~~~---~~~~gy~~~~~~~~~~~----~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (567)
+.|||+++|| .++.|||++++.....+ .++||+|||+|++++||+++++||.||+||++|.+|+|.+||++
T Consensus 437 --~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~ 514 (629)
T PRK10524 437 --EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEES 514 (629)
T ss_pred --CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHH
Confidence 7899999998 57889999887665433 46899999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccch---hhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccc
Q 008389 472 MYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKS---NEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKI 547 (567)
Q Consensus 472 l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi 547 (567)
|.++|+|.+++|++.+++..|+.++++++++++.... ..+.+.++|+++++++|+.++.|..|.+++ ||+|++||+
T Consensus 515 l~~~p~V~e~~vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi 594 (629)
T PRK10524 515 ISSHPAVAEVAVVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKL 594 (629)
T ss_pred HHhCCCcceEEEEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcch
Confidence 9999999999999999998899999999988754211 123456789999999999999999999888 999999999
Q ss_pred cHHHHHHHHHHcC
Q 008389 548 QKHVLRAKAKEMG 560 (567)
Q Consensus 548 ~r~~l~~~~~~~~ 560 (567)
+|+.|+++..+..
T Consensus 595 ~R~~L~~~~~~~~ 607 (629)
T PRK10524 595 LRRAIQAIAEGRD 607 (629)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999876543
No 27
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-68 Score=569.81 Aligned_cols=519 Identities=19% Similarity=0.226 Sum_probs=408.2
Q ss_pred cCHH-HHHhhhhhcCCCceeEEECC--------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 20 LTPL-WFLDRAATVHPTRTSVVHGS--------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 20 ~t~~-~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
+++. .+|+++++++|+++|+++.+ +++||+||++++.++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 4553 46667666789999999854 37999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccch------HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccc
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF------KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDL 164 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 164 (567)
+++|++++|+++.++.+++.+++++++++++|+++... +......... ...++++....... ..
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~---------~~~~iv~~~~~~~~-~~ 323 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK---------APKAIVLPADGKSV-RV 323 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc---------CCcEEEEeCCCCcc-cc
Confidence 99999999999999999999999999999999987542 1122211111 12333333211000 00
Q ss_pred hhccCCChHHHHHHHhcCCCC---CCC-CCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEE
Q 008389 165 KYALGRGAVEYEKFLQTGDPQ---FDW-KPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYL 240 (567)
Q Consensus 165 ~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~ 240 (567)
........|++++...... ... ......+++++|+|||||||.||||+++|.+++.........++++++|+++
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~ 401 (728)
T PLN03052 324 --KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVC 401 (728)
T ss_pred --ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEE
Confidence 0011234577766543211 011 1123558999999999999999999999999877766666667889999999
Q ss_pred EecCccchhhhHHHHHHhhhcCeeEEecc-CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccC
Q 008389 241 WTLPMFHCNGWCYTWSLAALCGTSICLRQ-VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAG 319 (567)
Q Consensus 241 ~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G 319 (567)
+..|++|+.+....+.+++.|+++++... +++..+++.++++++|++.++|++++.|.+.......+ +++||.++++|
T Consensus 402 ~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~d-lssLr~i~s~G 480 (728)
T PLN03052 402 WPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLD-WSSIRCFGSTG 480 (728)
T ss_pred ECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCC-hhheeEEEecC
Confidence 99999999998766677888999888753 56678999999999999999999999998765444445 89999999999
Q ss_pred CCCCHHHHHHHHhc-C-CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCC
Q 008389 320 AAPPPSVLHAMSQK-G-FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPA 397 (567)
Q Consensus 320 ~~l~~~~~~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 397 (567)
++++++...++.+. + .++.+.||+||+++.+...... .....+.+|.|.+|+ .++|+|++ |++++.
T Consensus 481 e~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~v~d~~-g~~v~~ 548 (728)
T PLN03052 481 EASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL----------QPQAFAAFSTPAMGC-KLFILDDS-GNPYPD 548 (728)
T ss_pred CCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCC----------CCCCCCccccCCCCc-eEEEECCC-CCCCCC
Confidence 99999988877653 4 5899999999997654432110 012346789999999 89999976 999988
Q ss_pred CCCceEEEEEeccc--ccccccCCCccchhccc-----CC--ccccCceEEEeCCCcEEEeccccceeeeCceecchHHH
Q 008389 398 DGKTIGEIVMSGNV--VMKGYLKNPKANEETFA-----NG--WYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEV 468 (567)
Q Consensus 398 ~~~~~Gei~v~~~~--~~~gy~~~~~~~~~~~~-----~g--~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~i 468 (567)
|..+.|||+++++. ...+|+++.. ...-|. .| ||+|||+++++++|+++++||+||+||++|.+|++.||
T Consensus 549 g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EI 627 (728)
T PLN03052 549 DAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEI 627 (728)
T ss_pred CCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHH
Confidence 74347999998652 2345665432 222231 23 89999999999999999999999999999999999999
Q ss_pred HHHHh-cCCCceeeEEEEeecCCCC-CcceEEEEEc--CCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCC
Q 008389 469 ENMMY-LHPAVLEASVVARADERWG-ESPCAFVTLK--PEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTA 543 (567)
Q Consensus 469 E~~l~-~~~~i~~~~v~~~~~~~~g-~~~~~~v~~~--~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~ 543 (567)
|+++. .+|.|.+++|++.+++..| +++++||+++ ++. ..+.+++.+.+++.++++|++++.|..|++++ ||+|+
T Consensus 628 E~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g~-~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~ 706 (728)
T PLN03052 628 ERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPGS-NPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTA 706 (728)
T ss_pred HHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCCC-CCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCC
Confidence 99995 7899999999999988766 8899999988 443 34556777888889999999999999999888 99999
Q ss_pred CccccHHHHHHHHHHcCCccccCC
Q 008389 544 TGKIQKHVLRAKAKEMGPVRKSKL 567 (567)
Q Consensus 544 ~GKi~r~~l~~~~~~~~~~~~~~~ 567 (567)
+||++|+.|++.+.+... .|||
T Consensus 707 sGKi~Rr~Lr~~~~~~~~--~~~~ 728 (728)
T PLN03052 707 SNKVMRRVLRQQLAQELS--RSKL 728 (728)
T ss_pred chHHHHHHHHHHHHhhhh--ccCC
Confidence 999999999999987764 5554
No 28
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2.1e-68 Score=563.11 Aligned_cols=509 Identities=23% Similarity=0.323 Sum_probs=413.3
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECC--ccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGS--TRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
|.+++.+.+... ..+|+++|+++.. .++||+||.+++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|
T Consensus 38 ~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G 116 (560)
T PLN02574 38 PNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLG 116 (560)
T ss_pred CCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhC
Confidence 344554444433 5789999999854 379999999999999999998 999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++++|++|.++.+++.++++.+++++++++.+..+.+.. ....++.+........ .......
T Consensus 117 ~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~-----~~~~~~~ 178 (560)
T PLN02574 117 GIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSP-------------LGVPVIGVPENYDFDS-----KRIEFPK 178 (560)
T ss_pred eEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHh-------------cCCcEEecCccccccc-----CccCccc
Confidence 999999999999999999999999999998775444322 1112333221100000 0011234
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH----hc-cCCCcEEEEecCccchh
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI----WG-MNEGAVYLWTLPMFHCN 249 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~-~~~~d~~~~~~p~~~~~ 249 (567)
+.+++....... ......++++++++|||||||.||+|.++|+++...+...... +. ....++++..+|++|.+
T Consensus 179 ~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 257 (560)
T PLN02574 179 FYELIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIY 257 (560)
T ss_pred HHHHhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHH
Confidence 555554432221 1223456899999999999999999999999998877655432 22 23567889999999999
Q ss_pred hhHHHHHHh-hhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHH
Q 008389 250 GWCYTWSLA-ALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLH 328 (567)
Q Consensus 250 g~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~ 328 (567)
|+...+... ..|++.++...+++..+++.|+++++|++.++|+++..+.+.........++++|.+++||++++++..+
T Consensus 258 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~ 337 (560)
T PLN02574 258 GLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQ 337 (560)
T ss_pred HHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHH
Confidence 987655544 5688877778889999999999999999999999999998875432222278999999999999999999
Q ss_pred HHHh-c-CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEE
Q 008389 329 AMSQ-K-GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIV 406 (567)
Q Consensus 329 ~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~ 406 (567)
++.+ + ++++++.||+||++.+++...... .....+++|.|++++ +++|+|++++++++.| +.|||+
T Consensus 338 ~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~---------~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~ 405 (560)
T PLN02574 338 DFVQTLPHVDFIQGYGMTESTAVGTRGFNTE---------KLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELW 405 (560)
T ss_pred HHHHHCCCCcEEecccccccCceeecCCCcc---------ccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEE
Confidence 9885 4 689999999999976544221111 112346899999999 8999998889999988 789999
Q ss_pred EecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEE
Q 008389 407 MSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVA 485 (567)
Q Consensus 407 v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 485 (567)
++|++++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|+++|++|++.+||.+|.++|+|.+++|++
T Consensus 406 v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~ 485 (560)
T PLN02574 406 IQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTA 485 (560)
T ss_pred EECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEc
Confidence 999999999999999988877 5899999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCCcc
Q 008389 486 RADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGPVR 563 (567)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~ 563 (567)
.+++..|+.++++|+..++. ..+. +++.++++++|+.++.|..+.+++ ||+|++||++|+.|++++.+....+
T Consensus 486 ~~~~~~g~~~~a~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~~~ 559 (560)
T PLN02574 486 VPDKECGEIPVAFVVRRQGS-TLSQ----EAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVSSR 559 (560)
T ss_pred cccCCCCcceEEEEEeCCCC-CCCH----HHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhccccC
Confidence 99988889999999887654 3344 678899999999999999998887 9999999999999999998776554
No 29
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-68 Score=559.02 Aligned_cols=517 Identities=35% Similarity=0.565 Sum_probs=447.4
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
++.++|+.++|.++++.+|+++|+.+.++++||+||++++.++|+.|.+.|+++|++|+++++|+.++++++|||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEY 175 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
+++|+++.++.+++..+++.+++++++++.+..+.+.......+ ....++.+++.... .......++
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~~~ 148 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP-------TVRTVIVEGDGPAA------PLAPEVGEY 148 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC-------CccEEEEecCcccc------ccccccccH
Confidence 99999999999999999999999999999987776665544332 34455555543211 112344566
Q ss_pred HHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHH
Q 008389 176 EKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW 255 (567)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (567)
.+++........ ......+++++++|||||||.||+|.++|+++..........++++++|++++.+|++|.+++...+
T Consensus 149 ~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 227 (521)
T PRK06187 149 EELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPY 227 (521)
T ss_pred HHHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHH
Confidence 666655443322 2235667899999999999999999999999999888888889999999999999999999998878
Q ss_pred HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc-C
Q 008389 256 SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK-G 334 (567)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~ 334 (567)
.++..|+++++....++..+++.++++++|.++++|++++.+.+........ +.++|.+++||+++++++.+.+.+. +
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~~~l~~v~~~Ge~l~~~~~~~~~~~~~ 306 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVD-FSSLRLVIYGGAALPPALLREFKEKFG 306 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccC-cchhhEEEEcCcCCCHHHHHHHHHHhC
Confidence 8888899888887789999999999999999999999999999887664444 8899999999999999999999865 9
Q ss_pred CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccc
Q 008389 335 FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMK 414 (567)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~ 414 (567)
+++++.||+||+++++..+....... ........+|.|++++ .++|+|++ +.+++.+.++.|||+++|+.++.
T Consensus 307 ~~v~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~~~g~~Gel~v~~~~~~~ 379 (521)
T PRK06187 307 IDLVQGYGMTETSPVVSVLPPEDQLP-----GQWTKRRSAGRPLPGV-EARIVDDD-GDELPPDGGEVGEIIVRGPWLMQ 379 (521)
T ss_pred cchheeeccCccCcccccCCcccccc-----cccccCCccccccCCe-EEEEECCC-CCCCCCCCCCeeEEEEECcchhh
Confidence 99999999999987666543322110 0112457899999999 89999987 78888833489999999999999
Q ss_pred cccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCc
Q 008389 415 GYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGES 494 (567)
Q Consensus 415 gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 494 (567)
||+++++.+...|.++||+|||+++++++|.+++.||.+|+++.+|.++++.+||+.+.++++|.+++|++.+++..++.
T Consensus 380 ~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 459 (521)
T PRK06187 380 GYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGER 459 (521)
T ss_pred hhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred ceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 495 PCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
+++++++.++. ..+. ++++++++++++.+..|..+.+++ +|+|++||++|++|+++|.+.
T Consensus 460 ~~~~v~~~~~~-~~~~----~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 460 PVAVVVLKPGA-TLDA----KELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred EEEEEEECCCC-CCCH----HHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 99999987765 3344 678899999999999999999887 999999999999999999875
No 30
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-68 Score=558.25 Aligned_cols=515 Identities=26% Similarity=0.391 Sum_probs=429.0
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.-++|+.++|.+.++++|+++|+++.++++||+||++++.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 4 ~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 83 (528)
T PRK07470 4 RRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAV 83 (528)
T ss_pred ccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeE
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYE 176 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
++++++.++.+++.++++.++++.++++.+..+.......... ....++.+.... ....++
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------------~~~~~~ 144 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP-------DLTHVVAIGGAR------------AGLDYE 144 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC-------cCceEEEeCCCc------------ccccHH
Confidence 9999999999999999999999999999887655444322211 234455544321 113455
Q ss_pred HHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh--ccCCCcEEEEecCccchhhhHHH
Q 008389 177 KFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW--GMNEGAVYLWTLPMFHCNGWCYT 254 (567)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~ 254 (567)
+++...............+++++++|||||||.||+|.++|.++...+......+ +...+|+++..+|++|..++...
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~ 224 (528)
T PRK07470 145 ALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQL 224 (528)
T ss_pred HHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHH
Confidence 5554432222222335678999999999999999999999999876555433332 56788999999999999998654
Q ss_pred HHHhhhcCeeEEec--cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHH-
Q 008389 255 WSLAALCGTSICLR--QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMS- 331 (567)
Q Consensus 255 ~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~- 331 (567)
+ ..+.|++.++.. .+++..+++.|+++++|++.++|++++.+.+........ ++++|.+++||+++++...+++.
T Consensus 225 ~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~~~ 302 (528)
T PRK07470 225 C-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYD-HSSLRYVIYAGAPMYRADQKRALA 302 (528)
T ss_pred H-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCC-CcceEEEEEcCCCCCHHHHHHHHH
Confidence 4 566777776664 478999999999999999999999999998876554444 78999999999999999998887
Q ss_pred hcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccc
Q 008389 332 QKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNV 411 (567)
Q Consensus 332 ~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~ 411 (567)
.++.++++.||+||+++.+..+..... . .........+++|.|++++ .++++|++ +.+++.+ +.|||+++|+.
T Consensus 303 ~~g~~~~~~YG~TE~~~~~~~~~~~~~-~--~~~~~~~~~~~~G~~~~g~-~~~i~d~~-~~~~~~g--~~Gel~i~~~~ 375 (528)
T PRK07470 303 KLGKVLVQYFGLGEVTGNITVLPPALH-D--AEDGPDARIGTCGFERTGM-EVQIQDDE-GRELPPG--ETGEICVIGPA 375 (528)
T ss_pred HhCcHHHHhCCCcccCCceeecchhhc-c--ccccccceeeccCcccCCc-EEEEECCC-CCCCCCC--CceEEEEeCCc
Confidence 458899999999999876654322100 0 0001123457889999999 89999976 8888888 78999999999
Q ss_pred ccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCC
Q 008389 412 VMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERW 491 (567)
Q Consensus 412 ~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~ 491 (567)
++.||+++++.+...|.+|||+|||+|+++++|++++.||.||+|+++|.+++|.+||..+.+++.|.+++|++.++...
T Consensus 376 ~~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~ 455 (528)
T PRK07470 376 VFAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVW 455 (528)
T ss_pred cchhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCccc
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCCccc
Q 008389 492 GESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGPVRK 564 (567)
Q Consensus 492 g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~~ 564 (567)
|+.++++++..++. ..+. ++++++++++|+.+++|..+++++ ||+|++||++|+.|++++.+....+.
T Consensus 456 ~~~~~~~~~~~~~~-~~~~----~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~~~ 524 (528)
T PRK07470 456 GEVGVAVCVARDGA-PVDE----AELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGLLDL 524 (528)
T ss_pred CceeEEEEEECCCC-CCCH----HHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcccccc
Confidence 88888888887664 3444 678899999999999999999887 99999999999999999998876653
No 31
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.2e-69 Score=574.78 Aligned_cols=516 Identities=22% Similarity=0.287 Sum_probs=396.9
Q ss_pred cCHHHHHhhhhhcCCCceeEEEC-------C--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHG-------S--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~-------~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
.|+.++|++.++++|+++|+... + +++||+||++++.++|+.|.++|+++||+|+|+++|+++|++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 58999999999999999999742 1 47999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCC
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGR 170 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (567)
+++|++++|+++.++.+++.++++.++++++|++.+..+.+........ .....++.++.............+.
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~------~~l~~ii~~~~~~~~~~~~~~~~~~ 196 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCS------SNLKTIVSFGDVSSEQKEEAEELGV 196 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCC------CCCEEEEEECCCChhhhhhhhcCCc
Confidence 9999999999999999999999999999999998765544433222111 0244566554321100000000111
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc-----cCCCcEEEEecCc
Q 008389 171 GAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG-----MNEGAVYLWTLPM 245 (567)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~d~~~~~~p~ 245 (567)
...++++++...... ....+..++++++|+|||||||.||||.+||++++..+......++ +.++|++++.+|+
T Consensus 197 ~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 275 (660)
T PLN02861 197 SCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPL 275 (660)
T ss_pred EEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcH
Confidence 224566666543221 1122346789999999999999999999999999988766655443 4688999999999
Q ss_pred cchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCC------------------------
Q 008389 246 FHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAP------------------------ 301 (567)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~------------------------ 301 (567)
+|.+++...+.++..|+++++. ..++..+++.|++++||+++++|++++.+.+..
T Consensus 276 ~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 354 (660)
T PLN02861 276 AHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLG 354 (660)
T ss_pred HHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999987666666777776665 568999999999999999999999999886410
Q ss_pred -------C---CCCcC---------CC-CchhhhhccCCCCCHHHHHHHHhcCC-eeeeccCCccCcCCcccccCCCCCC
Q 008389 302 -------S---EDTIL---------PL-PHVVHVNTAGAAPPPSVLHAMSQKGF-HVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
Q Consensus 302 -------~---~~~~~---------~l-~~lr~i~~~G~~l~~~~~~~~~~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~ 360 (567)
. ..... .+ +++|.+++||+++++++.++++.++. ++++.||+||+++.++.....
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~---- 430 (660)
T PLN02861 355 NLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN---- 430 (660)
T ss_pred HHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc----
Confidence 0 00000 01 57899999999999998765555554 799999999987655432111
Q ss_pred CCChhhhhhhhccCCceeccccceeEeeC-CCC-CccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceE
Q 008389 361 SLPPETQARMKARQGVRFIGLEKLDVIDT-RTQ-QPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLG 438 (567)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~-~~~-~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~ 438 (567)
.....+++|.|+|++ +++|+|. +.| .....+ +.|||+++|++++.|||++++.+.+.|.+|||+|||+|
T Consensus 431 ------~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg 501 (660)
T PLN02861 431 ------VFSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIG 501 (660)
T ss_pred ------cCCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhhccCcccCceE
Confidence 011247899999999 8999983 323 222333 57999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEeccccceeee-CceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc---------ch
Q 008389 439 VKHPDNYIEIKDRSKDIIIS-GGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD---------KS 508 (567)
Q Consensus 439 ~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~---------~~ 508 (567)
++|+||++++.||+||+||. +|++|+|.+||+++.++|.|.+++|++.+. ++.++|+|++..+.- ..
T Consensus 502 ~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~~~~l~~~~~~~~~~~ 578 (660)
T PLN02861 502 EWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPDRQALEDWAANNNKTG 578 (660)
T ss_pred EECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcCHHHHHHHHHHcCCCC
Confidence 99999999999999999995 899999999999999999999999999863 356899998764310 00
Q ss_pred hhH------HHHHHHHHHHH----h-cCCCCCCCceeecCc--c-----cCCCCccccHHHHHHHHHHc
Q 008389 509 NEQ------QLAEDIMKFCR----A-KMPAYWVPKSIVFGP--L-----PKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 509 ~~~------~~~~~l~~~l~----~-~l~~~~~p~~i~~~~--l-----P~t~~GKi~r~~l~~~~~~~ 559 (567)
+.. .....+.+.+. + .++.+.+++.+.+.+ + .+|+++|++|+.+.+.|.+.
T Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~ 647 (660)
T PLN02861 579 DFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDC 647 (660)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHH
Confidence 111 12223333333 2 488999999988754 6 79999999999999998764
No 32
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=4.3e-68 Score=567.54 Aligned_cols=501 Identities=18% Similarity=0.193 Sum_probs=394.4
Q ss_pred cCCCceeEEECC-----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCCh
Q 008389 32 VHPTRTSVVHGS-----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNA 106 (567)
Q Consensus 32 ~~p~~~a~~~~~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~ 106 (567)
++++++|+++.+ +++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+++.++.
T Consensus 96 ~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~ 175 (652)
T TIGR01217 96 AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGA 175 (652)
T ss_pred cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCH
Confidence 357899998843 579999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCceEEEEcccc---------hHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 107 PTIAFLLGHSASAVIMVDQEY---------FKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 107 ~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+++.+++++++++++|+++.. .+.+.++...++ ....++.+......... .........+++
T Consensus 176 ~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~ 246 (652)
T TIGR01217 176 RGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP-------TLRAVVHIPYLGPRETE--APKIDGALDLED 246 (652)
T ss_pred HHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC-------CccEEEEEeCCCCcccc--cccccCcccHHH
Confidence 999999999999999998754 233333322221 33455555422110000 000112345666
Q ss_pred HHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHH-HHHHHHHHhccCCCcEEEEecCccchhhhHHHHH
Q 008389 178 FLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYL-MSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWS 256 (567)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 256 (567)
++...............+++++|+|||||||.||||+++|.+++. ........++++++|++++..|+.|+.+ ...+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~ 325 (652)
T TIGR01217 247 FTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-NWLVS 325 (652)
T ss_pred HHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-HHHHH
Confidence 665422111111234568999999999999999999999998654 3344445578899999999999988753 33456
Q ss_pred HhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCC--CCCcCCCCchhhhhccCCCCCHHHHHHH
Q 008389 257 LAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPS--EDTILPLPHVVHVNTAGAAPPPSVLHAM 330 (567)
Q Consensus 257 ~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~--~~~~~~l~~lr~i~~~G~~l~~~~~~~~ 330 (567)
+++.|++++++.. .++..+++.++++++|++.+.|.++..+..... ....+ +++||.+++||++++++..+++
T Consensus 326 ~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~-l~sLr~i~~gGe~l~~~~~~~~ 404 (652)
T TIGR01217 326 GLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHD-LSALQCVASTGSPLPPDGFRWV 404 (652)
T ss_pred HHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCC-hhheeEEEeecCCCCHHHHHHH
Confidence 7778888887742 378899999999999999888887777765321 12233 8999999999999999999998
Q ss_pred Hhc-C--CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEE
Q 008389 331 SQK-G--FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVM 407 (567)
Q Consensus 331 ~~~-~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v 407 (567)
.+. + ..+.+.||+||+++...... +. .....+++|.|.+++ .++|+|++ |++++ | +.|||++
T Consensus 405 ~~~~~~~~~~~~~yG~TE~~~~~~~~~--~~--------~~~~~g~~g~p~~g~-~v~ivd~~-g~~~~-g--~~GEl~v 469 (652)
T TIGR01217 405 YDEIKADVWLASISGGTDICSCFAGAN--PT--------LPVHIGEIQAPGLGT-AVQSWDPE-GKPVT-G--EVGELVC 469 (652)
T ss_pred HHHhCCCceEEeccCHHHHhccccCCC--CC--------CCCcCCccCCCcCCC-ceEEECCC-CCCCC-C--CccEEEE
Confidence 753 3 56788999999754332211 00 011236788999999 89999987 77773 5 7899999
Q ss_pred ecc--cccccccCCCccch---hccc--CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCcee
Q 008389 408 SGN--VVMKGYLKNPKANE---ETFA--NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLE 480 (567)
Q Consensus 408 ~~~--~~~~gy~~~~~~~~---~~~~--~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~ 480 (567)
+|+ .++.|||++++.+. ..|. +|||+|||+|++|+||+++++||+||+|+++|++|+|.|||++|.+||+|.+
T Consensus 470 ~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~e 549 (652)
T TIGR01217 470 TNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRE 549 (652)
T ss_pred ecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcce
Confidence 996 58899999998553 2232 6899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 481 ASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 481 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
++|++.+++..|+.+++||+++++. ..+ +++.++|+++++++|+.+++|..|.+++ ||+|++||++|+.||+.+...
T Consensus 550 aavvg~~~~~~ge~~~afVv~~~~~-~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 550 SLCIGQEQPDGGYRVVLFVHLAPGA-TLD-DALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGT 627 (652)
T ss_pred EEEEeeecCCCCEEEEEEEEECCCC-CCC-HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCC
Confidence 9999999999899999999998875 222 3455789999999999999999999988 999999999999999997654
Q ss_pred C
Q 008389 560 G 560 (567)
Q Consensus 560 ~ 560 (567)
.
T Consensus 628 ~ 628 (652)
T TIGR01217 628 P 628 (652)
T ss_pred C
Confidence 3
No 33
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.3e-68 Score=559.63 Aligned_cols=512 Identities=24% Similarity=0.351 Sum_probs=416.0
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
.|+.++|++.++++|+++|++..++++||+||++++.++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 489999999999999999999989999999999999999999997 5999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCc--cc-------------
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDP--KD------------- 163 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~------------- 163 (567)
|+++.++.+++.++++.++++++|++.+....+.+..... ..+.++..+...... ..
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT--------GVKHVIVTEVADMLPPLKRLLINAVVKHVKKM 175 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc--------CcceeEEecccccccchhhhhcccchhhcccc
Confidence 9999999999999999999999999877655444332211 122222221110000 00
Q ss_pred chhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc--cCC-CcEEE
Q 008389 164 LKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG--MNE-GAVYL 240 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~--~~~-~d~~~ 240 (567)
...........+.+.+..............++++++++|||||||.||+|.++|+++..+.......++ +.. .++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 176 VPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred ccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 000000122344555543322211122346689999999999999999999999999877665555443 333 46889
Q ss_pred EecCccchhhhHHHHHH-hhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhcc
Q 008389 241 WTLPMFHCNGWCYTWSL-AALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTA 318 (567)
Q Consensus 241 ~~~p~~~~~g~~~~~~~-~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~ 318 (567)
+.+|++|.+++...+.. +..|++.++.. ..++..+++.|+++++|.+.++|+.+..+.......... ++++|.+++|
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~v~~g 334 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLD-FSALKLTLSG 334 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCC-hhhceEEEEc
Confidence 99999999998755544 44566555553 468899999999999999999999999998765433333 6789999999
Q ss_pred CCCCCHHHHHHHHhc-CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCC
Q 008389 319 GAAPPPSVLHAMSQK-GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPA 397 (567)
Q Consensus 319 G~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~ 397 (567)
|+++++++.+.+.+. ++++++.||+||+++++..+... ....+++|.|++++ .++|+|++ +++++.
T Consensus 335 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~~-~~~~~~ 401 (562)
T PRK05677 335 GMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDDD-GNELPL 401 (562)
T ss_pred CccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECCC-CCCCCC
Confidence 999999999998854 89999999999987665543211 11236799999999 89999986 888988
Q ss_pred CCCceEEEEEecccccccccCCCccchhccc-CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCC
Q 008389 398 DGKTIGEIVMSGNVVMKGYLKNPKANEETFA-NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHP 476 (567)
Q Consensus 398 ~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 476 (567)
| +.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+|+.+|.+|+|.+||+.+.+++
T Consensus 402 g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~ 479 (562)
T PRK05677 402 G--EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALP 479 (562)
T ss_pred C--CCeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCC
Confidence 8 7899999999999999999999988884 899999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 477 AVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 477 ~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
+|.+++|+++++...|+.++++++..++. ..+. ++++++++++|+++++|..+++++ ||+|++||++|++|++.
T Consensus 480 ~v~~~~v~g~~~~~~g~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~ 554 (562)
T PRK05677 480 GVLQCAAIGVPDEKSGEAIKVFVVVKPGE-TLTK----EQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDE 554 (562)
T ss_pred CccEEEEEeccCccCCceEEEEEEeCCCC-CCCH----HHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHH
Confidence 99999999999988888999999877654 3444 678899999999999999999988 99999999999999997
Q ss_pred HHHcC
Q 008389 556 AKEMG 560 (567)
Q Consensus 556 ~~~~~ 560 (567)
++...
T Consensus 555 ~~~~~ 559 (562)
T PRK05677 555 ELKKA 559 (562)
T ss_pred HHHhc
Confidence 76554
No 34
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9e-68 Score=554.97 Aligned_cols=504 Identities=33% Similarity=0.496 Sum_probs=429.6
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
..++.+.|.+.++.+|+++|+++.++++||+||++.+.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v 83 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVV 83 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|+++..+.+.+..+++.+++++++++............... ....++......... ......+|+++
T Consensus 84 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~~ 150 (513)
T PRK07656 84 PLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLP-------ALEHVVICETEEDDP------HTEKMKTFTDF 150 (513)
T ss_pred ecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccC-------CccEEEEEcCccccc------CccccccHHHH
Confidence 99999999999999999999999999887665554332222 334444444332111 01122456666
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHH-HH
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW-SL 257 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~-~~ 257 (567)
+...... ....+...+++++++|||||||.||+|.++|.++...+......+++++++++++.+|++|.+|+...+ .+
T Consensus 151 ~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (513)
T PRK07656 151 LAAGDPA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAP 229 (513)
T ss_pred HhcCCCC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHH
Confidence 6543321 122345778999999999999999999999999998888888888999999999999999999987644 44
Q ss_pred hhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-cCC-
Q 008389 258 AALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGF- 335 (567)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~- 335 (567)
+..|+++++....++..+++.|+++++|++.++|+++..+++........ ++++|.+++||+++++++.+.+.+ +++
T Consensus 230 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 308 (513)
T PRK07656 230 LMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAED-LSSLRLAVTGAASMPVALLERFESELGVD 308 (513)
T ss_pred HHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCC-ccceeeEEecCCCCCHHHHHHHHHHcCCC
Confidence 55666666667789999999999999999999999999999887655544 889999999999999999999884 588
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKG 415 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~g 415 (567)
++++.||+||++++++.+...... ......+|.|++++ .++|+|++ +++++.| +.|||+++|+.++.|
T Consensus 309 ~~~~~YG~tE~~~~~~~~~~~~~~--------~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~g 376 (513)
T PRK07656 309 IVLTGYGLSEASGVTTFNRLDDDR--------KTVAGTIGTAIAGV-ENKIVNEL-GEEVPVG--EVGELLVRGPNVMKG 376 (513)
T ss_pred ceEeEEccccCCCceeecCccccc--------cccCCCccccCCCc-EEEEECCC-CCCCCCC--CceEEEEEcchhhhh
Confidence 899999999998887765432211 01136799999999 89999976 8899888 789999999999999
Q ss_pred ccCCCccchhccc-CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCc
Q 008389 416 YLKNPKANEETFA-NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGES 494 (567)
Q Consensus 416 y~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 494 (567)
|++++..+...+. +|||+|||+|+++++|.+++.||.+|+|+++|.++++.+||+.+.++++|.+++|++.++...|+.
T Consensus 377 y~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 456 (513)
T PRK07656 377 YYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEV 456 (513)
T ss_pred hcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCce
Confidence 9999888887776 899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred ceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHH
Q 008389 495 PCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRA 554 (567)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (567)
+.++++.+++. ..+. +++++++++.|+.+++|..+.+++ +|+|++||++|++|++
T Consensus 457 ~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 457 GKAYVVLKPGA-ELTE----EELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEEEECCCC-CCCH----HHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 99999887644 3444 678889999999999999999888 9999999999999975
No 35
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=7.4e-68 Score=556.33 Aligned_cols=507 Identities=25% Similarity=0.337 Sum_probs=424.4
Q ss_pred chhhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 13 NAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 13 ~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
.+.+.++.|+.++|+++++.+|+++|+++.++++||+||++++.++|..|.+.|+++|++|+++++|++++++++|||++
T Consensus 14 ~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~ 93 (542)
T PRK06155 14 DPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAW 93 (542)
T ss_pred ccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 44555678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCCh
Q 008389 93 AGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGA 172 (567)
Q Consensus 93 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (567)
+|++++|+++.++.+++.++++.+++++++++.+....+....... .....++.++...... . ...
T Consensus 94 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~------~-~~~ 159 (542)
T PRK06155 94 LGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGD-------LPLPAVWLLDAPASVS------V-PAG 159 (542)
T ss_pred hCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccc-------cCcceEEEecCccccc------c-ccc
Confidence 9999999999999999999999999999999987766554322111 1234455554321100 0 000
Q ss_pred HHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhH
Q 008389 173 VEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWC 252 (567)
Q Consensus 173 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~ 252 (567)
.....+..... ........++++++++|||||||.||+|.++|+++..........+++++++++++.+|++|..++.
T Consensus 160 ~~~~~~~~~~~--~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~ 237 (542)
T PRK06155 160 WSTAPLPPLDA--PAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN 237 (542)
T ss_pred cchhhhcccCC--CCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH
Confidence 00001111111 1111234568999999999999999999999999988877777888999999999999999999998
Q ss_pred HHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh
Q 008389 253 YTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ 332 (567)
Q Consensus 253 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~ 332 (567)
..+..+..|+++++...+++..+++.|+++++|++.++|+++..|.+........ .+++|.++.+| +++.+.+.+.+
T Consensus 238 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~~~g~--~~~~~~~~~~~ 314 (542)
T PRK06155 238 AFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDR-AHRVRVALGPG--VPAALHAAFRE 314 (542)
T ss_pred HHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccc-cCceEEEEEcC--CCHHHHHHHHH
Confidence 7788888898888888889999999999999999999999999998876554444 67788766555 57888888874
Q ss_pred -cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecc-
Q 008389 333 -KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGN- 410 (567)
Q Consensus 333 -~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~- 410 (567)
+++++++.||+||++.++..+.. ....+.+|.+.+++ .++|+|++ +++++.+ +.|||+++|+
T Consensus 315 ~~~~~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gei~v~~~~ 378 (542)
T PRK06155 315 RFGVDLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDEH-DQELPDG--EPGELLLRADE 378 (542)
T ss_pred HcCCCEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECCC-CCCCCCC--CceEEEEecCC
Confidence 58999999999999876554211 12236789999999 89999977 8899988 7899999998
Q ss_pred --cccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeec
Q 008389 411 --VVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARAD 488 (567)
Q Consensus 411 --~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 488 (567)
.++.||+++++.+...|.++||+|||+|++++||.+++.||.+|+|+++|.+++|.+||+++.++++|.+++|++.++
T Consensus 379 ~~~~~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~ 458 (542)
T PRK06155 379 PFAFATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPS 458 (542)
T ss_pred ccccchhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecc
Confidence 699999999999988899999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 489 ERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
+..++.+.+++++..+. ..+. .+++++++++++.+++|..+.+++ +|+|++||++|++|++++...
T Consensus 459 ~~~~~~~~~~v~~~~~~-~~~~----~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~~~ 525 (542)
T PRK06155 459 ELGEDEVMAAVVLRDGT-ALEP----VALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGVTA 525 (542)
T ss_pred cccCceEEEEEEECCCC-CCCH----HHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhccCC
Confidence 88788888888887655 4444 678999999999999999999888 999999999999999987543
No 36
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-68 Score=560.08 Aligned_cols=516 Identities=22% Similarity=0.276 Sum_probs=411.2
Q ss_pred hhhhcccCHHHHHhhhhhcCCCceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhh
Q 008389 14 AANYMALTPLWFLDRAATVHPTRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVP 91 (567)
Q Consensus 14 ~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~ 91 (567)
++.--+.|+.+.|.+.|+++|+++|+++.+ ..+||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||+
T Consensus 8 ~~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~ 87 (540)
T PRK05857 8 AMPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACA 87 (540)
T ss_pred ccccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 333445699999999999999999998643 689999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCC
Q 008389 92 MAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRG 171 (567)
Q Consensus 92 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (567)
++|++++|+++.++.+++.++++.++++++|++.............. ....++.++.... ..
T Consensus 88 ~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~--------- 149 (540)
T PRK05857 88 KLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEAL--------HSIPVIAVDIAAV-TR--------- 149 (540)
T ss_pred HcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccc--------cccceeEeecccc-cc---------
Confidence 99999999999999999999999999999999887532211111111 1112233322110 00
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHH----HHhccCCCcEEEEecCccc
Q 008389 172 AVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVA----LIWGMNEGAVYLWTLPMFH 247 (567)
Q Consensus 172 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~----~~~~~~~~d~~~~~~p~~~ 247 (567)
.+...+..... ........+++++++|||||||.||+|.++|+++.++..... ..+.+..+++++..+|++|
T Consensus 150 --~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h 225 (540)
T PRK05857 150 --ESEHSLDAASL--AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATH 225 (540)
T ss_pred --ccccccccccc--ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccc
Confidence 00000000000 011234668999999999999999999999999987654332 2245667889999999999
Q ss_pred hhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHH
Q 008389 248 CNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVL 327 (567)
Q Consensus 248 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~ 327 (567)
..++...+.++..|++++ +...++..+++.|+++++|.+.++|+++..+.+........ ++++|.+++||++++....
T Consensus 226 ~~~l~~~~~~l~~G~~~v-~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~~~~~~~ 303 (540)
T PRK05857 226 IGGLWWILTCLMHGGLCV-TGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANAT-VPSLRLVGYGGSRAIAADV 303 (540)
T ss_pred cchHHHHHHHhhcceeEE-ecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCc-CccceEEEEcCccCCchhH
Confidence 999988788888888765 45678899999999999999999999999998876544444 8899999999999988887
Q ss_pred HHHHhcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCC---CCCceEE
Q 008389 328 HAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPA---DGKTIGE 404 (567)
Q Consensus 328 ~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~---~~~~~Ge 404 (567)
+++...++++++.||+||++.....+..... .......+++|.|++++ +++|+|++...+++. ..++.||
T Consensus 304 ~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~~Ge 376 (540)
T PRK05857 304 RFIEATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSASFGT 376 (540)
T ss_pred HHHHHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCCcce
Confidence 7666679999999999998754332211100 00111246899999999 899999874434432 1237899
Q ss_pred EEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEE
Q 008389 405 IVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVV 484 (567)
Q Consensus 405 i~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 484 (567)
|+++|+.++.||+++++.+.+.|.+|||+|||+|+++++|++++.||.+|+|+++|.+|+|.+||.++..+|+|.+++|+
T Consensus 377 l~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~ 456 (540)
T PRK05857 377 LWIKSPANMLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACY 456 (540)
T ss_pred EEEeCcchhhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 485 ARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 485 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
+.++...++.+.++++..++......+++.+.+.+.+++.++++++|..+.+++ +|+|++||++|+.|++.+++..
T Consensus 457 ~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~~ 533 (540)
T PRK05857 457 EIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATADK 533 (540)
T ss_pred ecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhcc
Confidence 999888788888888876654333345566777888888999999999999888 9999999999999999988653
No 37
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1e-67 Score=556.17 Aligned_cols=504 Identities=26% Similarity=0.360 Sum_probs=423.0
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC--CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG--STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.+|+.+++.+.+.++|+++|+++. ++++||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~ 101 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAV 101 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEE
Confidence 468999999999999999999985 478999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYE 176 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
++|+++.++.+++..+++.++++++|++....+.+...... ....++.++... .....+.
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~---------~~~~~i~~~~~~-----------~~~~~~~ 161 (537)
T PLN02246 102 TTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED---------DGVTVVTIDDPP-----------EGCLHFS 161 (537)
T ss_pred EecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc---------CCceEEEeCCCC-----------CCceeHH
Confidence 99999999999999999999999999998876655443210 112344444321 1123344
Q ss_pred HHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHH----HhccCCCcEEEEecCccchhhhH
Q 008389 177 KFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVAL----IWGMNEGAVYLWTLPMFHCNGWC 252 (567)
Q Consensus 177 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~ 252 (567)
++........ +.....++++++++|||||||.||+|.++|+++......... .+++.++|++++.+|++|.+++.
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~ 240 (537)
T PLN02246 162 ELTQADENEL-PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLN 240 (537)
T ss_pred HHhcCCCCCC-CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHH
Confidence 4444322221 122346789999999999999999999999999887665433 46788999999999999999986
Q ss_pred HHH-HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHH
Q 008389 253 YTW-SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMS 331 (567)
Q Consensus 253 ~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~ 331 (567)
..+ ..+..|+++++...+++..+++.|+++++|++.++|+++..|++........ ++++|.+++||+++++++.+.+.
T Consensus 241 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~l~~~~~~~~~ 319 (537)
T PLN02246 241 SVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYD-LSSIRMVLSGAAPLGKELEDAFR 319 (537)
T ss_pred HHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccC-ccceeEEEEecCcCCHHHHHHHH
Confidence 544 4556678887888889999999999999999999999999998766544444 78999999999999999999998
Q ss_pred hc--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 332 QK--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 332 ~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
+. ++.+++.||+||++.+++.+..... .......+++|.|++++ .++|+|++++.+++.| +.|||+++|
T Consensus 320 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 390 (537)
T PLN02246 320 AKLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRG 390 (537)
T ss_pred HHcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEEC
Confidence 64 6789999999999766554321100 00112236789999999 8999998889999988 789999999
Q ss_pred ccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeec
Q 008389 410 NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARAD 488 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 488 (567)
+.++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||+.+.++|+|.+++|++.++
T Consensus 391 ~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 470 (537)
T PLN02246 391 PQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKD 470 (537)
T ss_pred CchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccC
Confidence 999999999999988887 5899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 489 ERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
...++.++++++..++. ..+. ++++++++++++.++.|..+.+++ +|+|++||++|++|++++.+
T Consensus 471 ~~~~~~~~~~v~~~~~~-~~~~----~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 471 EVAGEVPVAFVVRSNGS-EITE----DEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred ccCCceeEEEEEeCCCC-CCCH----HHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 88888999999887664 3334 688999999999999999998887 99999999999999998754
No 38
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=7.5e-68 Score=550.96 Aligned_cols=480 Identities=27% Similarity=0.435 Sum_probs=414.2
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
+|+.++|++++.++||++|+++.++.+||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFL 179 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (567)
+++..+.+++..+++.++++.++++.+........ .. ..++++.
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~--------------~~----------------------~~~~~~~ 125 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPG--------------IS----------------------VKFAELM 125 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhh--------------cc----------------------ccHHHHh
Confidence 99999999999999999999999987654432211 00 0122222
Q ss_pred hcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhh
Q 008389 180 QTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAA 259 (567)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (567)
...............+++++++|||||||.||+|.++|.++...+......++++++|++++.+|++|++|+...+..+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~ 205 (483)
T PRK03640 126 NGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVI 205 (483)
T ss_pred hcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHh
Confidence 22111111222345678999999999999999999999999888777777789999999999999999999988788888
Q ss_pred hcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeee
Q 008389 260 LCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTH 339 (567)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~ 339 (567)
.|+++++....++..+++.++++++|++.++|+++..+.+...... . ..++|.++++|+++++...+.+.+.++++++
T Consensus 206 ~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~-~-~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~ 283 (483)
T PRK03640 206 YGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGT-Y-PSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQ 283 (483)
T ss_pred cCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccc-c-CCcceEEEEcCCCCCHHHHHHHHHhCCCeee
Confidence 8999888888999999999999999999999999999987654332 2 5689999999999999999999888999999
Q ss_pred ccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCC
Q 008389 340 TYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKN 419 (567)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~ 419 (567)
.||+||++..+...... ......+.+|.|++++ .++|.++ +++++.+ +.|||+++|+.++.||+++
T Consensus 284 ~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~ 349 (483)
T PRK03640 284 SYGMTETASQIVTLSPE---------DALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNR 349 (483)
T ss_pred eeccCcccccccccCcc---------cccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCC
Confidence 99999987544332211 1122347899999999 8999885 4677777 7899999999999999999
Q ss_pred CccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEE
Q 008389 420 PKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFV 499 (567)
Q Consensus 420 ~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v 499 (567)
++.+...|.+|||+|||++++++||.+++.||.+|+++.+|.++++.+||..+.++++|.++++++.+++..++.+++++
T Consensus 350 ~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~ 429 (483)
T PRK03640 350 EDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFV 429 (483)
T ss_pred HHHHHHHHhcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888788888888
Q ss_pred EEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 500 TLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 500 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
+.... .+. ++++++++++|+++.+|..+++++ +|+|++||++|++|++++++
T Consensus 430 ~~~~~---~~~----~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 430 VKSGE---VTE----EELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EeCCC---CCH----HHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 75443 333 678899999999999999999888 99999999999999999875
No 39
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-67 Score=554.10 Aligned_cols=521 Identities=29% Similarity=0.502 Sum_probs=425.2
Q ss_pred cccCHHHHHhhhhhcCCCceeEEEC--C--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhc
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHG--S--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMA 93 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~ 93 (567)
.+.++.++|++++..+|++.++.+. + +++||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 4568999999999999999998752 2 68999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChH
Q 008389 94 GAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAV 173 (567)
Q Consensus 94 G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (567)
|++++|+++.++.+++..+++.+++++++++.+..+.+.+...... ....++.+........ ...+..
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~ 155 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCP-------NVKGWVAMTDAAHLPA-----GSTPLL 155 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCC-------CceEEEEEccCCcccc-----CCcccc
Confidence 9999999999999999999999999999999887665544332222 2333444433211000 112345
Q ss_pred HHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHH--HHHHHhccCCCcEEEEecCccchhhh
Q 008389 174 EYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSL--SVALIWGMNEGAVYLWTLPMFHCNGW 251 (567)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~g~ 251 (567)
.+++++........+ ....++++++++|||||||.||+|.+||+++..+.. .....++++++|+++...|++|.+++
T Consensus 156 ~~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~ 234 (539)
T PRK07008 156 CYETLVGAQDGDYDW-PRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW 234 (539)
T ss_pred cHHHHhcccCCCcCc-ccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH
Confidence 566766544332222 234567899999999999999999999999865432 23345678899999999999998888
Q ss_pred HHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHH
Q 008389 252 CYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAM 330 (567)
Q Consensus 252 ~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~ 330 (567)
...+..+..|+++++.. .+++..+++.++++++|++.++|+.+..+++........ ++++|.++++|+++++.+.+++
T Consensus 235 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~~G~~l~~~~~~~~ 313 (539)
T PRK07008 235 GLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLR-FSTLRRTVIGGSACPPAMIRTF 313 (539)
T ss_pred HHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCC-cccceEEEEcCCCCCHHHHHHH
Confidence 77677777888877763 578999999999999999999999999999876555444 8899999999999999999999
Q ss_pred H-hcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 331 S-QKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 331 ~-~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
. .+++++++.||+||++..++.+.........+..........+|.|+|++ .++|+|++ +++++.++.+.|||+++|
T Consensus 314 ~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~~-~~~~~~~~~~~Gei~v~g 391 (539)
T PRK07008 314 EDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGDD-GRELPWDGKAFGDLQVRG 391 (539)
T ss_pred HHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECCC-CCccCCCCCcceEEEEeC
Confidence 7 45999999999999987665443221111111111122346789999999 89999976 888887654689999999
Q ss_pred ccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecC
Q 008389 410 NVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADE 489 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~ 489 (567)
+.++.||++++. ..+.+|||+|||+|++++||++++.||++|+|+.+|.+++|.+||..+..+|.|.++++++.++.
T Consensus 392 ~~~~~gy~~~~~---~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~ 468 (539)
T PRK07008 392 PWVIDRYFRGDA---SPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHP 468 (539)
T ss_pred CccchhhcCChh---hhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCc
Confidence 999999999873 34558999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCCc
Q 008389 490 RWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGPV 562 (567)
Q Consensus 490 ~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~ 562 (567)
..++.++++|+..++. ..+. ++++++++++++++..|..+++++ +|+|++||++|++|++++.+-.+.
T Consensus 469 ~~~~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~~~~ 537 (539)
T PRK07008 469 KWDERPLLVVVKRPGA-EVTR----EELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDYVLP 537 (539)
T ss_pred hhccceEEEEEeCCCC-ccCH----HHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhhccc
Confidence 8788899998877654 3344 688999999999999999999887 999999999999999999886543
No 40
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-67 Score=565.48 Aligned_cols=511 Identities=20% Similarity=0.228 Sum_probs=404.1
Q ss_pred CHHHHHhhhhhcCCCceeEEECC-----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 21 TPLWFLDRAATVHPTRTSVVHGS-----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 21 t~~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
++.+.+.++ .+|+++|+++.+ +++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Ga 164 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGA 164 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCc
Confidence 444444332 589999999854 6899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccch---------HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchh
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF---------KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKY 166 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (567)
+++|+++.++.+++.++++.++++++|+++... +.+.+....++ ....++.+....... ..
T Consensus 165 v~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~---~~ 234 (655)
T PRK03584 165 IWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP-------SLEHVVVVPYLGPAA---AA 234 (655)
T ss_pred EEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC-------CccEEEEEecCCCcc---cc
Confidence 999999999999999999999999999987532 22222222111 334555554321100 00
Q ss_pred ccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHH-HHHHHHHhccCCCcEEEEecCc
Q 008389 167 ALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLM-SLSVALIWGMNEGAVYLWTLPM 245 (567)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~~~~~p~ 245 (567)
........|++++...........+...+++++|+|||||||.||||+++|++++.+ .......+++.++|++++..++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 314 (655)
T PRK03584 235 AALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTC 314 (655)
T ss_pred cccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCc
Confidence 011233456666652222111223356689999999999999999999999987644 4445566789999999999998
Q ss_pred cchhhhHHHHHHhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccC
Q 008389 246 FHCNGWCYTWSLAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAG 319 (567)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G 319 (567)
.|+.+ ...+..++.|+++++... +++..+++.++++++|++.++|+++..+.+.... ...+ +++||.++++|
T Consensus 315 ~~~~~-~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~sLr~i~~~G 392 (655)
T PRK03584 315 GWMMW-NWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHD-LSALRTIGSTG 392 (655)
T ss_pred hHHhH-HHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCC-hhheEEEEEec
Confidence 88654 334566778888887642 5789999999999999999999999999864321 2233 88999999999
Q ss_pred CCCCHHHHHHHHhc---CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccC
Q 008389 320 AAPPPSVLHAMSQK---GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVP 396 (567)
Q Consensus 320 ~~l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 396 (567)
+++++++.+++.+. +..+.+.||+||+++....... ......+++|.|.+++ +++|+|++ |+++
T Consensus 393 e~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~----------~~~~~~g~~g~p~~g~-~~~ivd~~-g~~~- 459 (655)
T PRK03584 393 SPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNP----------LLPVYRGEIQCRGLGM-AVEAWDED-GRPV- 459 (655)
T ss_pred CCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCC----------CCCcCCCccCCCcCCc-eeEEECCC-CCCC-
Confidence 99999999999854 5789999999998654332110 0012347789999999 89999977 7777
Q ss_pred CCCCceEEEEEecc--cccccccCCCccch--hc-c--cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHH
Q 008389 397 ADGKTIGEIVMSGN--VVMKGYLKNPKANE--ET-F--ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVE 469 (567)
Q Consensus 397 ~~~~~~Gei~v~~~--~~~~gy~~~~~~~~--~~-~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 469 (567)
.+ +.|||+++|+ .++.|||++++.+. .. | .+|||+|||+|++|+||+++++||.||+||++|.+|+|.|||
T Consensus 460 ~g--~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE 537 (655)
T PRK03584 460 VG--EVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIY 537 (655)
T ss_pred CC--CceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHH
Confidence 55 7899999996 78999999987543 11 2 257899999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCcccc
Q 008389 470 NMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQ 548 (567)
Q Consensus 470 ~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (567)
.+|.+||.|.+++|++.+++..|+.++++|+++++. .. .+++.++|+++++++|+.++.|..|++++ ||+|++||++
T Consensus 538 ~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~~~~~-~~-~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~ 615 (655)
T PRK03584 538 RQVEALPEVLDSLVIGQEWPDGDVRMPLFVVLAEGV-TL-DDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKV 615 (655)
T ss_pred HHHHhCCCcceEEEEeeEcCCCCEEEEEEEEECCCC-CC-cHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccch
Confidence 999999999999999999988899999999998765 22 23455789999999999999999999988 9999999999
Q ss_pred HHHHHHHHHHcCCc
Q 008389 549 KHVLRAKAKEMGPV 562 (567)
Q Consensus 549 r~~l~~~~~~~~~~ 562 (567)
|+.||+++......
T Consensus 616 r~~lr~~~~~~~~~ 629 (655)
T PRK03584 616 ELPVKKLLHGRPVK 629 (655)
T ss_pred HHHHHHHHcCCCCC
Confidence 99999998765433
No 41
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=8e-68 Score=559.11 Aligned_cols=510 Identities=22% Similarity=0.295 Sum_probs=399.8
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECCc----------cccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHH
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGST----------RYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAH 87 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~~----------~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~ 87 (567)
+.+|+.++|++.++++|+++|+++.+. ++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++
T Consensus 4 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~ 83 (552)
T PRK09274 4 SMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALT 83 (552)
T ss_pred hhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHH
Confidence 457889999999999999999998654 8999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 88 FGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 88 lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
|||+++|++++|++|.++.+++.++++.++++++|++.+. ..... ..... ......++.++...
T Consensus 84 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~-~~~~~-~~~~~-----~~~~~~~i~~~~~~--------- 147 (552)
T PRK09274 84 FALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKA-HLARR-LFGWG-----KPSVRRLVTVGGRL--------- 147 (552)
T ss_pred HHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHH-HHHHH-HhccC-----ccchhheecccccc---------
Confidence 9999999999999999999999999999999999987531 11111 00000 00122233332210
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFH 247 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 247 (567)
......+.++...............++++++++|||||||.||+|.++|+++...+......+++.++++.++.+|++|
T Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~ 226 (552)
T PRK09274 148 -LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFA 226 (552)
T ss_pred -ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHH
Confidence 0111234444322111111122345689999999999999999999999999998888888889999999999999877
Q ss_pred hhhhHHHHHHhhhcCeeEEec-------cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCC
Q 008389 248 CNGWCYTWSLAALCGTSICLR-------QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGA 320 (567)
Q Consensus 248 ~~g~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~ 320 (567)
.+++ ..|++.++.. .+++..+++.|+++++|+++++|+++..|.+........ ++++|.+++||+
T Consensus 227 ~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~ 298 (552)
T PRK09274 227 LFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIK-LPSLRRVISAGA 298 (552)
T ss_pred hhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCC-CchhhEEEecCC
Confidence 5543 3466665542 357899999999999999999999999999865544444 889999999999
Q ss_pred CCCHHHHHHHHhc---CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCC-------
Q 008389 321 APPPSVLHAMSQK---GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTR------- 390 (567)
Q Consensus 321 ~l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~------- 390 (567)
++++++.+++.+. ++++++.||+||++++++......... ...........++|.|+|++ +++|+|+.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~-~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~ 376 (552)
T PRK09274 299 PVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFA-TRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEW 376 (552)
T ss_pred cCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhcc-ccccccCCCCcccCccCCCc-eEEEEeccccccccc
Confidence 9999999999864 579999999999976554322110000 00000011124689999999 89999863
Q ss_pred -CCCccCCCCCceEEEEEecccccccccCCCccchhcc---cCC--ccccCceEEEeCCCcEEEeccccceeeeCceecc
Q 008389 391 -TQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF---ANG--WYHTGDLGVKHPDNYIEIKDRSKDIIISGGENIS 464 (567)
Q Consensus 391 -~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~---~~g--~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~ 464 (567)
++++++.| +.|||+++|+.++.||+++++.+...| .+| ||+|||+|++++||++++.||.+|+|+++|.+|+
T Consensus 377 ~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~ 454 (552)
T PRK09274 377 DDALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLY 454 (552)
T ss_pred cccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEEC
Confidence 35677777 889999999999999999998887765 356 9999999999999999999999999999999999
Q ss_pred hHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCC-
Q 008389 465 SVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKT- 542 (567)
Q Consensus 465 ~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t- 542 (567)
|.+||++|.++|+|.+++|++.+++. ++.++++|++.++. ..+.+++.+++++++.+ ++.+..|..+.+++ ||+|
T Consensus 455 p~eIE~~l~~~p~V~~~~v~~~~~~~-~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~lP~t~ 531 (552)
T PRK09274 455 TIPCERIFNTHPGVKRSALVGVGVPG-AQRPVLCVELEPGV-ACSKSALYQELRALAAA-HPHTAGIERFLIHPSFPVDI 531 (552)
T ss_pred cHHHHHHHHhCcccceeEEEEeCCCC-CceEEEEEEccCcc-ccchHHHhhhhHHHHHh-cCCCcceeEEeccCCCCccc
Confidence 99999999999999999999998764 67888999888775 34444455555555544 34556778888888 9999
Q ss_pred -CCccccHHHHHHHHHHc
Q 008389 543 -ATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 543 -~~GKi~r~~l~~~~~~~ 559 (567)
++||++|++|++++.+.
T Consensus 532 ~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 532 RHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred cccccccHHHHHHHHHHh
Confidence 79999999999987765
No 42
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-67 Score=553.36 Aligned_cols=510 Identities=27% Similarity=0.408 Sum_probs=432.2
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
.+++.+.+.++++.+|+++|+.+.++.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 16 ~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v 95 (542)
T PRK07786 16 RQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIAV 95 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|+++..+.+++.++++.+++++++++....+.+.......+ ....++.+.+.. .....+++++
T Consensus 96 pl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------~~~~~~~~~~ 158 (542)
T PRK07786 96 PVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVP-------LLSTVVVAGGSS----------DDSVLGYEDL 158 (542)
T ss_pred EcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccC-------ccceEEEecCCC----------cccccCHHHH
Confidence 99999999999999999999999999876655543322111 334455444321 1122455666
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhcc-CCCcEEEEecCccchhhhHHHHHH
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGM-NEGAVYLWTLPMFHCNGWCYTWSL 257 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~d~~~~~~p~~~~~g~~~~~~~ 257 (567)
+....... .......+++++++|||||||.||+|.++|+++...+......+++ ..++++++..|++|.+|+...+..
T Consensus 159 ~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 237 (542)
T PRK07786 159 LAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPG 237 (542)
T ss_pred hhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHH
Confidence 55433222 1223455789999999999999999999999999888777777776 678899999999999999888888
Q ss_pred hhhcCeeEEec--cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--
Q 008389 258 AALCGTSICLR--QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK-- 333 (567)
Q Consensus 258 ~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-- 333 (567)
+..|+++++.. .+++..+++.++++++|.++++|+++..++........ ..++|.+++||+++++++.+.+.+.
T Consensus 238 l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~--~~~lr~i~~gg~~~~~~~~~~~~~~~~ 315 (542)
T PRK07786 238 LLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPR--DLALRVLSWGAAPASDTLLRQMAATFP 315 (542)
T ss_pred HHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCcc--CcceEEEEECCCCCCHHHHHHHHHHcC
Confidence 88899888764 57899999999999999999999999999886543332 2368999999999999999998854
Q ss_pred CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccc
Q 008389 334 GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVM 413 (567)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~ 413 (567)
++++++.||+||++++.+.+... ........+|.|++++ .++|+|++ +++++.+ +.|||+++|+.++
T Consensus 316 ~~~l~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~~ 382 (542)
T PRK07786 316 EAQILAAFGQTEMSPVTCMLLGE---------DAIRKLGSVGKVIPTV-AARVVDEN-MNDVPVG--EVGEIVYRAPTLM 382 (542)
T ss_pred CCeEEeeecccccccceEecCcc---------cccccCCCccccCCCc-eEEEECCC-CCCCcCC--CceEEEEEChhhh
Confidence 78999999999998665543211 1112346789999999 89999976 8888887 7899999999999
Q ss_pred ccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCC
Q 008389 414 KGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGE 493 (567)
Q Consensus 414 ~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~ 493 (567)
.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.++++.+||+++.+++.|.+++|++.++...++
T Consensus 383 ~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~ 462 (542)
T PRK07786 383 SGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGE 462 (542)
T ss_pred hhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887788
Q ss_pred cceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCCcccc
Q 008389 494 SPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGPVRKS 565 (567)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~~~ 565 (567)
.+++++++.++...... +++.++++++++.++.|..+.+++ ||+|++||++|++|++.+.+....+.+
T Consensus 463 ~~~~~v~~~~~~~~~~~----~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~~~~~~ 531 (542)
T PRK07786 463 VPVAVAAVRNDDAALTL----EDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACVNVERR 531 (542)
T ss_pred eEEEEEEECCCCCCCCH----HHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhhchhhc
Confidence 88998887765423333 688999999999999999999888 999999999999999999988776644
No 43
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-67 Score=548.04 Aligned_cols=480 Identities=19% Similarity=0.283 Sum_probs=409.1
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
|++.+.|+++++++|+++|+.+.+.++||.||+++++++|+.|.+.|. +|++|+++++|++++++++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 678999999999999999999999999999999999999999999874 8999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFL 179 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (567)
+++.++.+++.++++.++++.++++......+.. ....++.++. +.+.+
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-------------~~~~~~~~~~------------------~~~~~ 128 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPD-------------EEGRVIEIDE------------------WKRMI 128 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhh-------------ccceEEEehh------------------hhhhh
Confidence 9999999999999999999999998865443321 1122222221 11111
Q ss_pred hcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhh
Q 008389 180 QTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAA 259 (567)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (567)
....+... ......+++++++|||||||.||+|.++|+++..+.......++++++|+++...|++|..++...+..+.
T Consensus 129 ~~~~~~~~-~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~ 207 (487)
T PRK07638 129 EKYLPTYA-PIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLY 207 (487)
T ss_pred hhcccccc-ccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHc
Confidence 11111111 11233467899999999999999999999999998888888889999999999999999888877777888
Q ss_pred hcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--CCee
Q 008389 260 LCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--GFHV 337 (567)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~~~i 337 (567)
.|+++++...+++..+++.++++++|++.++|+++..+.+.... ..+.+.++++|+.++.+..+++.+. ++++
T Consensus 208 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~ 282 (487)
T PRK07638 208 VGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENRV-----IENKMKIISSGAKWEAEAKEKIKNIFPYAKL 282 (487)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcCc-----CCceeEEEEcCCCCCHHHHHHHHHHcCCCeE
Confidence 89999888889999999999999999999999999999887321 3445567889999999999998865 7899
Q ss_pred eeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccccc
Q 008389 338 THTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYL 417 (567)
Q Consensus 338 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~ 417 (567)
++.||+||++.++..+... ......++|.|++++ .++|+|++ |.+++.| +.|||+++|+.++.||+
T Consensus 283 ~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-g~~~~~g--~~Gel~v~~~~~~~gy~ 348 (487)
T PRK07638 283 YEFYGASELSFVTALVDEE----------SERRPNSVGRPFHNV-QVRICNEA-GEEVQKG--EIGTVYVKSPQFFMGYI 348 (487)
T ss_pred EEEecCCccCceEEecccc----------cCCCCCCCCcccCCc-EEEEECCC-CCCCCCC--CCeEEEEecccceeeec
Confidence 9999999998665443211 112346889999999 89999986 8899888 78999999999999999
Q ss_pred CCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceE
Q 008389 418 KNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCA 497 (567)
Q Consensus 418 ~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~ 497 (567)
+++..+...+.+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||+++.++|+|.+++|++.+++..|+.+++
T Consensus 349 ~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~ 428 (487)
T PRK07638 349 IGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVA 428 (487)
T ss_pred CCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEE
Confidence 99988777778999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred EEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 498 FVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 498 ~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
+++. ..+. ++++++++++++.+++|..+++++ +|+|++||++|++|++++.+.+
T Consensus 429 ~v~~-----~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 429 IIKG-----SATK----QQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQE 483 (487)
T ss_pred EEEC-----CCCH----HHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhccc
Confidence 8863 1223 688899999999999999999887 9999999999999999987653
No 44
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-67 Score=561.27 Aligned_cols=514 Identities=17% Similarity=0.190 Sum_probs=398.7
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC--C---ccccHHHHHHHHHHHHHHHHHc---cCCCC-----------CEEEEEcCC
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG--S---TRYTWLQTYQRCRRLASALCKR---SIGLG-----------CTVAIIAPN 79 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~--~---~~~Ty~el~~~~~~lA~~L~~~---g~~~g-----------d~V~l~~~~ 79 (567)
..|+.++|.+.++++|+++|+.+. + +++||+||.+++.++|.+|.+. |+++| |+|+|+++|
T Consensus 60 ~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 60 YKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred cchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 579999999999999999999973 2 6899999999999999999974 99998 999999999
Q ss_pred hHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCC
Q 008389 80 IPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESC 159 (567)
Q Consensus 80 ~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 159 (567)
+++|++++|||+++|+++||+++.++.+++.++|+.++++++|++.+..+.+.+....++ ..+.++.++....
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~-------~l~~ii~~~~~~~ 212 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP-------HLKKLIILDTLIK 212 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC-------CceEEEEECCCCc
Confidence 999999999999999999999999999999999999999999998777666555433333 4566777754211
Q ss_pred C------------------cccc-----------------------h----------------hccCCChHHHHHHHhcC
Q 008389 160 D------------------PKDL-----------------------K----------------YALGRGAVEYEKFLQTG 182 (567)
Q Consensus 160 ~------------------~~~~-----------------------~----------------~~~~~~~~~~~~~l~~~ 182 (567)
. .... . ...+.....|+++....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 292 (746)
T PTZ00342 213 SKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNK 292 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhc
Confidence 0 0000 0 00000011123332221
Q ss_pred CCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh--ccCCCcEEEEecCccchhhhHHHHHHhhh
Q 008389 183 DPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW--GMNEGAVYLWTLPMFHCNGWCYTWSLAAL 260 (567)
Q Consensus 183 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 260 (567)
... ....+.+++++++|+|||||||.||||++||+|+++.+....... .....+++++.+|++|++++...+.++..
T Consensus 293 ~~~-~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~ 371 (746)
T PTZ00342 293 TTN-YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFML 371 (746)
T ss_pred ccC-CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHc
Confidence 111 112234678999999999999999999999999998876654322 23356899999999999999877777777
Q ss_pred cCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcC--------CCCCC---------------------------
Q 008389 261 CGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNA--------PSEDT--------------------------- 305 (567)
Q Consensus 261 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~--------~~~~~--------------------------- 305 (567)
|+++++... ++..+++.|++++||+++++|.+|+++.+. ....+
T Consensus 372 G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 450 (746)
T PTZ00342 372 GGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITH 450 (746)
T ss_pred CCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHH
Confidence 888777654 899999999999999999999999998752 10000
Q ss_pred ------cCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCcee
Q 008389 306 ------ILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRF 378 (567)
Q Consensus 306 ------~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 378 (567)
....+++|.+++||+++++++.++++. +|+++++.||+||+++.++..... ....+++|.|+
T Consensus 451 v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~gsvG~p~ 519 (746)
T PTZ00342 451 ISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTESIGGPI 519 (746)
T ss_pred HHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcccccCcC
Confidence 000257899999999999999999984 699999999999997765543211 12347899998
Q ss_pred -ccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhccc-CCccccCceEEEeCCCcEEEecccccee
Q 008389 379 -IGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFA-NGWYHTGDLGVKHPDNYIEIKDRSKDII 456 (567)
Q Consensus 379 -~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i 456 (567)
|++ +++|+|.+++.....+ +.|||+++||+++.|||++++.+.+.|. +|||+|||+|++++||+++++||.+|+|
T Consensus 520 ~pg~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlI 596 (746)
T PTZ00342 520 SPNT-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLV 596 (746)
T ss_pred CCcE-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeE
Confidence 999 8999985544443333 4699999999999999999999999995 9999999999999999999999999999
Q ss_pred e-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCc----------------cchhhH--------
Q 008389 457 I-SGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEV----------------DKSNEQ-------- 511 (567)
Q Consensus 457 ~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~----------------~~~~~~-------- 511 (567)
| .+|++|+|.+||+++.++|.|.+|+|++.... ..++|+|++..+. ...+..
T Consensus 597 kls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~ 673 (746)
T PTZ00342 597 KLSQGEYIETDMLNNLYSQISFINFCVVYGDDSM---DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETI 673 (746)
T ss_pred EeCCCEEEchHHHHHHHhcCCCccEEEEEccCCc---cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhh
Confidence 9 68999999999999999999999999997432 3489999876521 000100
Q ss_pred ---HHHHHHHHHH----H-hcCCCCCCCceeecCc--cc----CCCCccccHHHHHHHHHH
Q 008389 512 ---QLAEDIMKFC----R-AKMPAYWVPKSIVFGP--LP----KTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 512 ---~~~~~l~~~l----~-~~l~~~~~p~~i~~~~--lP----~t~~GKi~r~~l~~~~~~ 558 (567)
.+.+.+.+.+ + +.|+.+.+++.|.+.+ +. .|++.|+.|+.+.+.|++
T Consensus 674 ~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~ 734 (746)
T PTZ00342 674 NNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAF 734 (746)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHH
Confidence 1122223222 2 3599999999988754 33 899999999999998874
No 45
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-66 Score=547.96 Aligned_cols=507 Identities=29% Similarity=0.438 Sum_probs=431.2
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
..|+.++|++.++++|+++|+++.++.+||+||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 10 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v 89 (523)
T PRK08316 10 RQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHV 89 (523)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|+++..+.+++.++++.+++++++++.+....+.+...... ...+........ .........+.++
T Consensus 90 ~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~------~~~~~~~~~~~~~ 155 (523)
T PRK08316 90 PVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--------VDTLILSLVLGG------REAPGGWLDFADW 155 (523)
T ss_pred ecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--------ccceeeeecccc------cccccchhhHHHH
Confidence 99999999999999999999999999887766554332211 111111111000 0112233455555
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHH-H
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWS-L 257 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~-~ 257 (567)
....... ........+++++++|||||||.||+|.++|+++..........+++++++++++.+|++|..|+...+. .
T Consensus 156 ~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 234 (523)
T PRK08316 156 AEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPY 234 (523)
T ss_pred HhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHH
Confidence 5443222 1233456789999999999999999999999999988888778889999999999999999999865544 4
Q ss_pred hhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--CC
Q 008389 258 AALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--GF 335 (567)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~~ 335 (567)
...|+++++....++..+++.++++++|++.++|+++..+.+........ ++++|.+++||+.++.++.+.+.+. ++
T Consensus 235 ~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gg~~~~~~~~~~~~~~~~~~ 313 (523)
T PRK08316 235 LYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRD-LSSLRKGYYGASIMPVEVLKELRERLPGL 313 (523)
T ss_pred HhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCC-cccceEEEEcCCcCCHHHHHHHHHHcCCC
Confidence 56688877777889999999999999999999999999999876555444 7899999999999999999999864 78
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKG 415 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~g 415 (567)
++++.||+||++.++..+.... .....+++|.|++++ ++.|.|++ +.+++.+ +.|||+++|++++.|
T Consensus 314 ~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gei~v~~~~~~~~ 380 (523)
T PRK08316 314 RFYNCYGQTEIAPLATVLGPEE---------HLRRPGSAGRPVLNV-ETRVVDDD-GNDVAPG--EVGEIVHRSPQLMLG 380 (523)
T ss_pred ceeeeecccccCccccccCccc---------cccccCCcccCCCCc-EEEEEcCC-CCCCCCC--CcceEEEECCchhhh
Confidence 9999999999987665532211 112346889999999 89999976 8888887 789999999999999
Q ss_pred ccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcc
Q 008389 416 YLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESP 495 (567)
Q Consensus 416 y~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~ 495 (567)
|+++++.+...|.+|||+|||+|++++||.+++.||.+|+|+++|.+++|.+||+.+.++++|.+++|++.+++..++.+
T Consensus 381 y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~ 460 (523)
T PRK08316 381 YWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAV 460 (523)
T ss_pred hcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred eEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 496 CAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 496 ~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
+++++..++. ..+. +.+.++++++++.+++|..+.+++ +|+|++||++|++|++.|.+.
T Consensus 461 ~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~ 520 (523)
T PRK08316 461 TAVVVPKAGA-TVTE----DELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGA 520 (523)
T ss_pred EEEEEECCCC-CCCH----HHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 9999988765 3344 678889999999999999999877 999999999999999999764
No 46
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-66 Score=547.18 Aligned_cols=521 Identities=31% Similarity=0.510 Sum_probs=425.9
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEEC--C--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHG--S--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
.+++|+.++|+++++++|++++++.. + +++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~ 86 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMG 86 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHh
Confidence 45789999999999999999999852 3 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCCh
Q 008389 93 AGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGA 172 (567)
Q Consensus 93 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (567)
+|++++|+++.++.+++.++++.+++++++++.++.+.+.+...... ....++.+........ ......
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~ 155 (542)
T PRK06018 87 IGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLP-------SVERYVVLTDAAHMPQ----TTLKNA 155 (542)
T ss_pred cCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCC-------CccEEEEecccccccc----cCcccc
Confidence 99999999999999999999999999999999988776665443332 3344444433211000 011123
Q ss_pred HHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHH--HHHHHHHHhccCCCcEEEEecCccchhh
Q 008389 173 VEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYL--MSLSVALIWGMNEGAVYLWTLPMFHCNG 250 (567)
Q Consensus 173 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~--~~~~~~~~~~~~~~d~~~~~~p~~~~~g 250 (567)
..+.+++........+ .....+++++++|||||||.||+|.+||++.+. ........++++.+|+++...|++|.++
T Consensus 156 ~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~ 234 (542)
T PRK06018 156 VAYEEWIAEADGDFAW-KTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANS 234 (542)
T ss_pred ccHHHHhccCCcccCc-ccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhh
Confidence 3566666554332211 234567899999999999999999999997432 2223344567889999999999999999
Q ss_pred hHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHH
Q 008389 251 WCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHA 329 (567)
Q Consensus 251 ~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~ 329 (567)
+...+.++..|+++++.. .+++..+++.++++++|++.++|+++..+.+........ ++++|.++++|+++++++.++
T Consensus 235 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~~G~~l~~~~~~~ 313 (542)
T PRK06018 235 WGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLK-LPHLKMVVCGGSAMPRSMIKA 313 (542)
T ss_pred hHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCC-cccceEEEEcCCCCCHHHHHH
Confidence 887777778888776653 568899999999999999999999999998766544444 789999999999999999999
Q ss_pred HHhcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 330 MSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 330 ~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
++++++++++.||+||++.+++.+.....................|.|.+++ +++|+|++ +++++.++...|||+++|
T Consensus 314 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~~-~~~~~~~~~~~Gel~i~g 391 (542)
T PRK06018 314 FEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDDA-GKELPWDGKTFGRLKVRG 391 (542)
T ss_pred HHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECCC-CCCCCCCCCceeEEEEec
Confidence 9888899999999999987766554332222222222222345789999999 89999976 888887654689999999
Q ss_pred ccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecC
Q 008389 410 NVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADE 489 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~ 489 (567)
+.++.||++.... ....+|||+|||+++++++|++++.||.+|+|+.+|.++++.+||.++.++|+|.+++|++.++.
T Consensus 392 ~~~~~gy~~~~~~--~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~ 469 (542)
T PRK06018 392 PAVAAAYYRVDGE--ILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHP 469 (542)
T ss_pred CCcchhhhcCccc--EecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCC
Confidence 9999999984221 11247899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 490 RWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 490 ~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
.+++.+.+++++.++. ..+. ++++++++++++.+..|..+.+++ ||+|++||++|++|++++.+-
T Consensus 470 ~~~~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 535 (542)
T PRK06018 470 KWDERPLLIVQLKPGE-TATR----EEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKDY 535 (542)
T ss_pred CcCceeEEEEEeCCCC-CCCH----HHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhcc
Confidence 8888999999988765 4444 678899999999999999999888 999999999999999999884
No 47
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-67 Score=562.58 Aligned_cols=507 Identities=21% Similarity=0.252 Sum_probs=403.0
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECC---------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHH
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGS---------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHF 88 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~l 88 (567)
+..|+.++|+++++.+|+++|+++.+ +++||+||++++.++|+.|.+. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 35799999999999999999998732 5799999999999999999987 8999999999999999999999
Q ss_pred hhhhcCCeeeec-cccCC--hHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccch
Q 008389 89 GVPMAGAVLNAV-NIRLN--APTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLK 165 (567)
Q Consensus 89 A~~~~G~~~v~i-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (567)
||+++|++++|+ ++..+ .+++.++++.++++++|++.+..+.+.+.....+. .....++.++.....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----- 167 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPA-----KERPRVIAVDAVPDE----- 167 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccc-----cccceEEEccccccc-----
Confidence 999999999999 45554 67899999999999999988765554443222110 011233333211000
Q ss_pred hccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCc
Q 008389 166 YALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPM 245 (567)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~ 245 (567)
... .. ...+..++++++|+|||||||.||+|.+||+++...+......+++.++|+++..+|+
T Consensus 168 -------------~~~---~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl 230 (631)
T PRK07769 168 -------------VGA---TW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPF 230 (631)
T ss_pred -------------ccc---cc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 000 00 0113456899999999999999999999999999888877778889999999999999
Q ss_pred cchhhhHHHHHHhhhcCeeEEecc--C--CHHHHHHHHHhhCc---eEeeeCcHHHHHHHcC---CCC--CCcCCCCchh
Q 008389 246 FHCNGWCYTWSLAALCGTSICLRQ--V--TAKAVYSAIAKYGV---THFCAAPVVLNSIVNA---PSE--DTILPLPHVV 313 (567)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~---t~l~~~p~~~~~l~~~---~~~--~~~~~l~~lr 313 (567)
+|.+|+...+.+++.|++++++.+ + ++..+++.++++++ +.+..+|+++..+... ... .... ++++|
T Consensus 231 ~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~-l~~lr 309 (631)
T PRK07769 231 FHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLD-LSNVK 309 (631)
T ss_pred cCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcc-hhhee
Confidence 999999888888888999888753 3 88999999999986 7899999988777643 111 1223 88999
Q ss_pred hhhccCCCCCHHHHHHHHhc----CC---eeeeccCCccCcCCcccccCCCCCCC----------------CChhhhhhh
Q 008389 314 HVNTAGAAPPPSVLHAMSQK----GF---HVTHTYGLSETYGPSTVCAWKPEWDS----------------LPPETQARM 370 (567)
Q Consensus 314 ~i~~~G~~l~~~~~~~~~~~----~~---~i~~~YG~tE~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 370 (567)
.+++||+++++++.+++.+. |+ .+++.||+||+++.++.......... .........
T Consensus 310 ~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 389 (631)
T PRK07769 310 GLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVA 389 (631)
T ss_pred eEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCcee
Confidence 99999999999999998853 33 59999999998765554322111000 000000112
Q ss_pred hccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhccc------------------CCcc
Q 008389 371 KARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFA------------------NGWY 432 (567)
Q Consensus 371 ~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~------------------~g~~ 432 (567)
..++|.|.++. .++|+|++++++++.| +.|||+++|+.++.|||++++.+.+.|. +|||
T Consensus 390 ~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~ 466 (631)
T PRK07769 390 QVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWV 466 (631)
T ss_pred EEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCee
Confidence 35789999999 8999998889999988 8999999999999999999999888874 3899
Q ss_pred ccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhc-CCCcee--eEEEEeec-------------------CC
Q 008389 433 HTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYL-HPAVLE--ASVVARAD-------------------ER 490 (567)
Q Consensus 433 ~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~i~~--~~v~~~~~-------------------~~ 490 (567)
+|||+|+++ ||+++++||.||+||++|++|+|.|||++|.+ +|.|.+ ++|+++++ +.
T Consensus 467 ~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~ 545 (631)
T PRK07769 467 RTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPED 545 (631)
T ss_pred eccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCC
Confidence 999999996 99999999999999999999999999999986 899998 88889888 55
Q ss_pred CCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCC-CC-CCceeecCc---ccCCCCccccHHHHHHHHHHcCC
Q 008389 491 WGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPA-YW-VPKSIVFGP---LPKTATGKIQKHVLRAKAKEMGP 561 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~-~p~~i~~~~---lP~t~~GKi~r~~l~~~~~~~~~ 561 (567)
.|+.++++|+++++....+. .+|.++++++++. +. .|..+.+++ ||+|++|||+|++|++.+.+...
T Consensus 546 ~ge~~~a~v~~~~~~~~~~~----~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~~ 617 (631)
T PRK07769 546 TSEQLVIVAERAPGAHKLDP----QPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSL 617 (631)
T ss_pred CCccEEEEEEecCccccccH----HHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCCC
Confidence 78899999998876423444 6788888888885 55 477777653 99999999999999999876643
No 48
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-66 Score=548.62 Aligned_cols=526 Identities=28% Similarity=0.413 Sum_probs=426.6
Q ss_pred cccccccchhhhcccCHHHHHhhhhhcCCCceeEEEC--CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH
Q 008389 6 GIDDLPKNAANYMALTPLWFLDRAATVHPTRTSVVHG--STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI 83 (567)
Q Consensus 6 ~~~~~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~ 83 (567)
++..+.....+....|+.++|.+.++++|+++|+++. ++++||.||.+++.++|..|.+.|+++||+|+++++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~ 83 (558)
T PRK12583 4 PSYYQGGGDKPLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEW 83 (558)
T ss_pred cccccCCCCCCcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH
Confidence 3344444445566779999999999999999999884 47899999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccch-----HHHHHHHHHHhhh------cCCCCCCCeEE
Q 008389 84 YEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF-----KLAEEALKIMEEK------SNGRFKPPLLI 152 (567)
Q Consensus 84 ~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~------~~~~~~~~~~i 152 (567)
++++|||+++|++++++++.++.+++.++++.++++++|+++... ..+.+....+... .........++
T Consensus 84 ~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (558)
T PRK12583 84 LLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVV 163 (558)
T ss_pred HHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEE
Confidence 999999999999999999999999999999999999999986532 2222221111100 00011122333
Q ss_pred EecCCCCCcccchhccCCChHHHHHHHhcCCCC-----CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHH
Q 008389 153 VIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQ-----FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSV 227 (567)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~ 227 (567)
...... ......|++........ .........+++++++|||||||.||+|.++|+++.+++...
T Consensus 164 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~ 233 (558)
T PRK12583 164 SLAPAP----------PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFV 233 (558)
T ss_pred EecCCC----------CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHH
Confidence 332211 01222344433322111 011122356789999999999999999999999999888888
Q ss_pred HHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe--ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCC
Q 008389 228 ALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL--RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDT 305 (567)
Q Consensus 228 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~ 305 (567)
...++++++|++++..|++|.+|+...+..++.+|..+++ ..+++..+++.++++++|.+.++|+++..++.......
T Consensus 234 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 313 (558)
T PRK12583 234 AESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGN 313 (558)
T ss_pred HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccC
Confidence 8888999999999999999999987766665555555543 35789999999999999999999999998887655444
Q ss_pred cCCCCchhhhhccCCCCCHHHHHHHHh-cC-CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccc
Q 008389 306 ILPLPHVVHVNTAGAAPPPSVLHAMSQ-KG-FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEK 383 (567)
Q Consensus 306 ~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 383 (567)
.. ++++|.+++||+++++++.+++.+ ++ ..+++.||+||+++++..+..... ......++|.|++++ .
T Consensus 314 ~~-~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~ 383 (558)
T PRK12583 314 FD-LSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-E 383 (558)
T ss_pred CC-chhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-e
Confidence 44 889999999999999999999875 44 579999999999877665432111 112346889999999 8
Q ss_pred eeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCcee
Q 008389 384 LDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGEN 462 (567)
Q Consensus 384 ~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~ 462 (567)
++|+|++ +.+++.+ +.|||+++|+.++.||+++++.+...| .++||+|||+|++++||.+++.||.+|+|+++|.+
T Consensus 384 ~~i~d~~-~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~ 460 (558)
T PRK12583 384 VKVVDPD-GATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGEN 460 (558)
T ss_pred EEEECCC-CCCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEE
Confidence 9999998 8889888 789999999999999999999888777 78999999999999999999999999999999999
Q ss_pred cchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccC
Q 008389 463 ISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPK 541 (567)
Q Consensus 463 v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~ 541 (567)
|+|.+||+.+.++++|.+++|++.++...++.++++++..++. ..+. .+++++++++|+++++|..+++++ +|+
T Consensus 461 v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~----~~i~~~~~~~L~~~~~P~~i~~v~~lP~ 535 (558)
T PRK12583 461 IYPREIEEFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGH-AASE----EELREFCKARIAHFKVPRYFRFVDEFPM 535 (558)
T ss_pred eCHHHHHHHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCC-CCCH----HHHHHHHHhhcccCcCCcEEEEeccCCC
Confidence 9999999999999999999999999988788999999987664 3334 689999999999999999999888 999
Q ss_pred CCCccccHHHHHHHHHHc
Q 008389 542 TATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 542 t~~GKi~r~~l~~~~~~~ 559 (567)
|++||++|++|+++..+.
T Consensus 536 t~sGK~~r~~L~~~~~~~ 553 (558)
T PRK12583 536 TVTGKVQKFRMREISIEE 553 (558)
T ss_pred CCCCCccHHHHHHHHHhh
Confidence 999999999999997765
No 49
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.3e-66 Score=549.21 Aligned_cols=512 Identities=24% Similarity=0.354 Sum_probs=425.5
Q ss_pred hhhhcccCHHHHHhhhhhcCCCceeEEECC-ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 14 AANYMALTPLWFLDRAATVHPTRTSVVHGS-TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 14 ~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~-~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
...|...|+.++|++.++.+||++|+++.+ +++||+||++++.++|+.|++.|+++||+|+++++|+++++++++||++
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 17 QGYWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred cCCCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 345677899999999999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChHHHHHHHhccCceEEEEcccc-----hHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 93 AGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEY-----FKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 93 ~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
+|++++|+++.++.+++.++++.+++++++++... .+.+......+. ....++.++......
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------ 163 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP-------QLQQIVGVDKLAPAT------ 163 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC-------CCcEEEEeCCcCCCc------
Confidence 99999999999999999999999999999997643 222222222221 334555555432111
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFH 247 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 247 (567)
....+.+++....... .......+++++++|||||||.||+|.++|.++..........+++.+++++++..|++|
T Consensus 164 ---~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h 239 (547)
T PRK06087 164 ---SSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGH 239 (547)
T ss_pred ---CccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHH
Confidence 1124455544332211 122346789999999999999999999999999888887777788999999999999999
Q ss_pred hhhhHHHHH-HhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHH
Q 008389 248 CNGWCYTWS-LAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSV 326 (567)
Q Consensus 248 ~~g~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~ 326 (567)
.+|+...+. .+..|+++++...+++..+++.++++++|++.++|+++..+++........ ++++|.+++||+++++++
T Consensus 240 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~-~~~lr~i~~gG~~~~~~~ 318 (547)
T PRK06087 240 ATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPAD-LSALRFFLCGGTTIPKKV 318 (547)
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCC-CCCeEEEEEcCCCCCHHH
Confidence 999865444 455677777778889999999999999999999988888887765444444 789999999999999999
Q ss_pred HHHHHhcCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEE
Q 008389 327 LHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIV 406 (567)
Q Consensus 327 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~ 406 (567)
.+.+.+.++++++.||+||++++....... .......++|.|++++ .++++|++ +.+++.| +.|||+
T Consensus 319 ~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~ 385 (547)
T PRK06087 319 ARECQQRGIKLLSVYGSTESSPHAVVNLDD---------PLSRFMHTDGYAAAGV-EIKVVDEA-RKTLPPG--CEGEEA 385 (547)
T ss_pred HHHHHHcCCcEEEEecccccCCccccCCCc---------chhhcCCcCCccCCCc-eEEEEcCC-CCCCcCC--CcceEE
Confidence 999888899999999999997665432211 0112235689999999 89999966 8888887 789999
Q ss_pred EecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEE
Q 008389 407 MSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVA 485 (567)
Q Consensus 407 v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 485 (567)
++|+.++.||+++++.+...| .+|||+|||+++++++|.+++.||.+|+|+.+|.+++|.+||+.+.++++|.++++++
T Consensus 386 v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 465 (547)
T PRK06087 386 SRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVA 465 (547)
T ss_pred EecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 999999999999998888777 4799999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHH-hcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 486 RADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCR-AKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~-~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
.+++..|++++++++..+.....+. .++.+++. +.++.+++|..+.+++ ||+|++||++|+.|++.+.+..
T Consensus 466 ~~~~~~g~~~~~~v~~~~~~~~~~~----~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 466 MPDERLGERSCAYVVLKAPHHSLTL----EEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred cCCCCcCceEEEEEEECCCCCCCCH----HHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 9988889999999998764323344 56777765 5799999999999988 9999999999999999887763
No 50
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-67 Score=549.61 Aligned_cols=509 Identities=21% Similarity=0.317 Sum_probs=406.8
Q ss_pred cCHHHHHhhhhhcCCCceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
-|+.++|++++.++|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 16 ~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 95 (534)
T PRK05852 16 PRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVV 95 (534)
T ss_pred ccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEE
Confidence 579999999999999999999854 579999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+|+++.++.+++.++++.++++++|++........... .. .....+.+....... .......+..
T Consensus 96 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~ 160 (534)
T PRK05852 96 VPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TR-------WWPLTVNVGGDSGPS------GGTLSVHLDA 160 (534)
T ss_pred eecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--cc-------ccceeeeeccccccc------cccccccccc
Confidence 99999999999999999999999999875432111000 00 001111221110000 0000000000
Q ss_pred HHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHH
Q 008389 178 FLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSL 257 (567)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 257 (567)
... ............++.++++|||||||.||+|.++|+++...+......++++.+|++++..|++|.+|+...+..
T Consensus 161 ~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 238 (534)
T PRK05852 161 ATE--PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLA 238 (534)
T ss_pred ccC--CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHH
Confidence 000 000001111224678999999999999999999999999988888888899999999999999999999876666
Q ss_pred hhhcCeeEEec---cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC-CcCCCCchhhhhccCCCCCHHHHHHHHh-
Q 008389 258 AALCGTSICLR---QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED-TILPLPHVVHVNTAGAAPPPSVLHAMSQ- 332 (567)
Q Consensus 258 ~~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-~~~~l~~lr~i~~~G~~l~~~~~~~~~~- 332 (567)
.+.+++.++++ .+++..+++.|+++++|.++++|+++..+.+..... .....+++|.++++|+++++++.+.+.+
T Consensus 239 ~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~ 318 (534)
T PRK05852 239 TLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTE 318 (534)
T ss_pred HHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHH
Confidence 65555555542 468899999999999999999999999998765432 1122678999999999999999999884
Q ss_pred cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccc
Q 008389 333 KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVV 412 (567)
Q Consensus 333 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~ 412 (567)
++.++++.||+||++..++......... ........+..|. .+++ .++|+|++ +++++.+ +.|||+++|+.+
T Consensus 319 ~~~~v~~~YG~tE~~~~~~~~~~~~~~~---~~~~~~~~g~~g~-~~g~-~~~i~d~~-g~~~~~g--~~Gel~v~g~~v 390 (534)
T PRK05852 319 FAAPVVCAFGMTEATHQVTTTQIEGIGQ---TENPVVSTGLVGR-STGA-QIRIVGSD-GLPLPAG--AVGEVWLRGTTV 390 (534)
T ss_pred hCCChhhccCccccchhhhcCCcccccc---ccCcccccccCCC-CCCC-eEEEECCC-CCCCCCC--CceEEEEecCcc
Confidence 5899999999999987655432210000 0000111233444 6889 89999987 8888888 789999999999
Q ss_pred cccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCC
Q 008389 413 MKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWG 492 (567)
Q Consensus 413 ~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g 492 (567)
+.||+++++.+...|.+|||+|||+|++++||++++.||.+|+|+.+|.+++|.+||+++.++|+|.+++|++.+++..|
T Consensus 391 ~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g 470 (534)
T PRK05852 391 VRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYG 470 (534)
T ss_pred cchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 493 ESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 493 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
+.++++++..+.. ..+. +++.++++++|+.+++|..+.+++ ||+|++||++|++|+++|..
T Consensus 471 ~~~~~~vv~~~~~-~~~~----~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 471 EAVAAVIVPRESA-PPTA----EELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred ceEEEEEEECCCC-CCCH----HHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhcc
Confidence 9999999876543 3444 678999999999999999999988 99999999999999998854
No 51
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-66 Score=549.85 Aligned_cols=529 Identities=27% Similarity=0.414 Sum_probs=425.0
Q ss_pred hhhcccCHHHHHhhhhhcCCCceeEEECC---ccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 15 ANYMALTPLWFLDRAATVHPTRTSVVHGS---TRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 15 ~~~~~~t~~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
..+.++|+.++|++++..+|+++|+++.+ +.+||+||.+++.++|..|.+ .|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 5 MQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred hhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 34567899999999999999999998753 789999999999999999996 79999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCC
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGR 170 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (567)
+++|++++++++.++.+++.++++.++++++|++....+.+.+....+. ....++.++...............
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~ 157 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECP-------CVRAVVFIGPSDADSAAAHMPEGI 157 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCc-------cccEEEEecCcccccchhcccccc
Confidence 9999999999999999999999999999999999887776665544333 334455444322111100111122
Q ss_pred ChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHH--HHHhccCCCcEEEEecCccch
Q 008389 171 GAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSV--ALIWGMNEGAVYLWTLPMFHC 248 (567)
Q Consensus 171 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~--~~~~~~~~~d~~~~~~p~~~~ 248 (567)
...+|.+++........ .....++++++++|||||||.||+|.++|+++....... ...+++..++++++.+|++|.
T Consensus 158 ~~~~~~~l~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~ 236 (576)
T PRK05620 158 KVYSYEALLDGRSTVYD-WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHV 236 (576)
T ss_pred ccccHHHHhhcCCCcCC-CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHh
Confidence 34457777764332221 123456899999999999999999999999986554432 234678899999999999999
Q ss_pred hhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHH
Q 008389 249 NGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVL 327 (567)
Q Consensus 249 ~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~ 327 (567)
+|+...+.++..|+++++.. .+++..+++.++++++|.+.++|+++..++......... ..++|.++++|+++++.+.
T Consensus 237 ~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~~~~~~~ 315 (576)
T PRK05620 237 LSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPE-RMSLQEIYVGGSAVPPILI 315 (576)
T ss_pred hhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcc-cCceeEEEEcCCCCCHHHH
Confidence 99988888888888877664 578999999999999999999999999888654333222 4579999999999999999
Q ss_pred HHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEE
Q 008389 328 HAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIV 406 (567)
Q Consensus 328 ~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~ 406 (567)
+.+.+ +++++++.||+||++..+........ ............+|.+.+++ +++++|+ +..++...++.|||+
T Consensus 316 ~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~ 389 (576)
T PRK05620 316 KAWEERYGVDVVHVWGMTETSPVGTVARPPSG---VSGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQ 389 (576)
T ss_pred HHHHHHhCCceeeeccccccccceeeeccCCc---cccccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEE
Confidence 99884 58999999999999876554322110 00000011134678899999 8999986 666654333689999
Q ss_pred EecccccccccCCCccc----h------------hcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHH
Q 008389 407 MSGNVVMKGYLKNPKAN----E------------ETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVE 469 (567)
Q Consensus 407 v~~~~~~~gy~~~~~~~----~------------~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 469 (567)
++|+.++.||+++++.+ . ..| .+|||+|||++++++||.+++.||.+|+|+.+|.++++.+||
T Consensus 390 v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE 469 (576)
T PRK05620 390 VRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLE 469 (576)
T ss_pred EEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHH
Confidence 99999999999998876 2 223 478999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCcccc
Q 008389 470 NMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQ 548 (567)
Q Consensus 470 ~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (567)
..+.++|.|.+++|++.++...|+.+++++++.++....+ ...++++++++++|+.++.|+.+.+++ +|+|++||++
T Consensus 470 ~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~--~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~ 547 (576)
T PRK05620 470 NYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTR--ETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFD 547 (576)
T ss_pred HHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCccc--ccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCc
Confidence 9999999999999999999988899999999887642211 112789999999999999999999888 9999999999
Q ss_pred HHHHHHHHHHcC
Q 008389 549 KHVLRAKAKEMG 560 (567)
Q Consensus 549 r~~l~~~~~~~~ 560 (567)
|+.|++++.+..
T Consensus 548 r~~L~~~~~~~~ 559 (576)
T PRK05620 548 KKDLRQHLADGD 559 (576)
T ss_pred HHHHHHHHhcCC
Confidence 999999988653
No 52
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.5e-66 Score=548.04 Aligned_cols=525 Identities=28% Similarity=0.435 Sum_probs=426.7
Q ss_pred hhhhcccCHHHHHhhhhhcCCCceeEEE--CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhh
Q 008389 14 AANYMALTPLWFLDRAATVHPTRTSVVH--GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVP 91 (567)
Q Consensus 14 ~~~~~~~t~~~~l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~ 91 (567)
....++.|+.++|.+.++.+|+++|+++ .++++||+||.+++.++|..|.+.|+++||+|+++++|++++++++|||+
T Consensus 10 ~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~ 89 (559)
T PRK08315 10 DVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATA 89 (559)
T ss_pred cCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 3445578999999999999999999998 45789999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeeccccCChHHHHHHHhccCceEEEEcccchH-----HHHHHHHHHhhh------cCCCCCCCeEEEecCCCCC
Q 008389 92 MAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK-----LAEEALKIMEEK------SNGRFKPPLLIVIGDESCD 160 (567)
Q Consensus 92 ~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~ 160 (567)
++|++++|+++..+.+++..+++.+++++++++..... .+.+....+... .........++.++...
T Consensus 90 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (559)
T PRK08315 90 KIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK-- 167 (559)
T ss_pred HhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC--
Confidence 99999999999999999999999999999999875421 222221111000 00001122333332210
Q ss_pred cccchhccCCChHHHHHHHhcCCCC-----CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCC
Q 008389 161 PKDLKYALGRGAVEYEKFLQTGDPQ-----FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNE 235 (567)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~ 235 (567)
......+.++....... .........+++++++|||||||.||+|.++|+++..++......+++++
T Consensus 168 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 239 (559)
T PRK08315 168 --------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTE 239 (559)
T ss_pred --------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCC
Confidence 11223344443322110 01112245678999999999999999999999999988888888889999
Q ss_pred CcEEEEecCccchhhhHHHHHHh-hhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchh
Q 008389 236 GAVYLWTLPMFHCNGWCYTWSLA-ALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVV 313 (567)
Q Consensus 236 ~d~~~~~~p~~~~~g~~~~~~~~-~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr 313 (567)
+|+++..+|++|..|+...+... ..|+++++. ..+++..+++.++++++|++.++|+.+..++......... ++++|
T Consensus 240 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~-~~~lr 318 (559)
T PRK08315 240 EDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFD-LSSLR 318 (559)
T ss_pred CceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCC-chhhh
Confidence 99999999999999987655554 455555534 4578999999999999999999999999888765544444 88999
Q ss_pred hhhccCCCCCHHHHHHHHh-cCC-eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCC
Q 008389 314 HVNTAGAAPPPSVLHAMSQ-KGF-HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRT 391 (567)
Q Consensus 314 ~i~~~G~~l~~~~~~~~~~-~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~ 391 (567)
.++++|+++++++.+.+.+ ++. ++++.||+||++.+++.+..... .......+|.|++++ .++|+|+++
T Consensus 319 ~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~v~i~d~~~ 389 (559)
T PRK08315 319 TGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP--------LEKRVTTVGRALPHL-EVKIVDPET 389 (559)
T ss_pred eeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc--------hhhccCCCCccCCCc-EEEEEcCcc
Confidence 9999999999999998874 454 59999999999765554332111 112347889999999 899999988
Q ss_pred CCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHH
Q 008389 392 QQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVEN 470 (567)
Q Consensus 392 ~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (567)
+++++.| +.|||+++|+.++.||+++++.+...| .++||+|||+|+++++|.++++||.+|+|+++|.++++.+||+
T Consensus 390 ~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~ 467 (559)
T PRK08315 390 GETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEE 467 (559)
T ss_pred CCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHH
Confidence 9999988 889999999999999999998888877 6899999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccH
Q 008389 471 MMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQK 549 (567)
Q Consensus 471 ~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r 549 (567)
.+.++++|.+++|++.++...++.++++|+..++. ..+. +++++++.++++.+++|..+++++ +|+|++||++|
T Consensus 468 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~----~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r 542 (559)
T PRK08315 468 FLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGA-TLTE----EDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQK 542 (559)
T ss_pred HHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCC-CCCH----HHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeH
Confidence 99999999999999999887788899999887654 3344 678899999999999999999888 99999999999
Q ss_pred HHHHHHHHHcCCcccc
Q 008389 550 HVLRAKAKEMGPVRKS 565 (567)
Q Consensus 550 ~~l~~~~~~~~~~~~~ 565 (567)
++|++++.+....+.+
T Consensus 543 ~~L~~~~~~~~~~~~~ 558 (559)
T PRK08315 543 FKMREMMIEELGLQAA 558 (559)
T ss_pred HHHHHHHHhhhchhhc
Confidence 9999998887655543
No 53
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-66 Score=540.16 Aligned_cols=491 Identities=29% Similarity=0.457 Sum_probs=415.0
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
+++.++|+++++.+|+++|+++.++++||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFL 179 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (567)
+++.++.+++.++++.+++++++++.+...... .....+.++.... ..+..+
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~~-------------~~~~~~- 133 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVA--------------LETPKIVIDAAAQ-------------ADSRRL- 133 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhh--------------cccceEEecCccc-------------chhHHH-
Confidence 999999999999999999999999877543211 0112222222100 001111
Q ss_pred hcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHH-HHHh
Q 008389 180 QTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYT-WSLA 258 (567)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~-~~~~ 258 (567)
..............++++++++|||||||.||+|.++|+++...+......++++.+++++...|++|.+++... +..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 213 (497)
T PRK06145 134 AQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVL 213 (497)
T ss_pred hccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHH
Confidence 111111111223466899999999999999999999999998777666677889999999999999999888654 4556
Q ss_pred hhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--CCe
Q 008389 259 ALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--GFH 336 (567)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~~~ 336 (567)
..|+++++...+++..+++.++++++|.+.++|+++..++......... ++++|.+++||++++.++.+.+.+. +.+
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~ 292 (497)
T PRK06145 214 WVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFD-LDSLAWCIGGGEKTPESRIRDFTRVFTRAR 292 (497)
T ss_pred hccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccc-cccceEEEecCCCCCHHHHHHHHHHcCCCc
Confidence 6788877777889999999999999999999999999999876554444 7899999999999999999998854 678
Q ss_pred eeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccc
Q 008389 337 VTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGY 416 (567)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy 416 (567)
+++.||+||+++.++...... .....+++|.|++++ .+++.|++ +++++.+ +.|||+++|+.++.||
T Consensus 293 v~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~~--~~Gel~v~g~~~~~Gy 359 (497)
T PRK06145 293 YIDAYGLTETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADGA-GRWLPPN--MKGEICMRGPKVTKGY 359 (497)
T ss_pred eEEeecCcccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECCC-CCCCCCC--CceEEEEECcchhhhh
Confidence 999999999987554322111 111235789999999 89999976 8888887 7899999999999999
Q ss_pred cCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcce
Q 008389 417 LKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPC 496 (567)
Q Consensus 417 ~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~ 496 (567)
+++++.+...|.++||+|||+|+++++|++++.||.+|+|+++|.+++|.+||+.+.++++|.+++|++.+++..|+.++
T Consensus 360 ~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~ 439 (497)
T PRK06145 360 WKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERIT 439 (497)
T ss_pred cCChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEE
Confidence 99999999899999999999999999999999999999999999999999999999999999999999999988889999
Q ss_pred EEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHH
Q 008389 497 AFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAK 557 (567)
Q Consensus 497 ~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (567)
+++++.+.. ..+. +++.++++++|+.++.|..+.+++ +|+|++||++|++|++++.
T Consensus 440 ~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 440 AVVVLNPGA-TLTL----EALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEECCCC-CCCH----HHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 999987654 3344 688899999999999999999887 9999999999999998753
No 54
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-66 Score=542.30 Aligned_cols=509 Identities=26% Similarity=0.352 Sum_probs=426.9
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.++.|+.++|.++++++|+++|+++.++.+||.||.+++.++|..|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEccc-chHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQE-YFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEY 175 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
++|+++..+.+++.++++.++++.+++++. ......+...... ....++.+...... ...
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------------~~~ 149 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP-------SLKHVLTLGPVPDG------------VDL 149 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC-------CceEEEEeCCccch------------hhH
Confidence 999999999999999999999999999876 3333332221111 23344444432110 011
Q ss_pred HHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHH
Q 008389 176 EKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW 255 (567)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (567)
.+......+ ........++++++++|||||||.||+|.++|.++...+......+++..++++++..|++|.+|+. .+
T Consensus 150 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~ 227 (524)
T PRK06188 150 LAAAAKFGP-APLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FL 227 (524)
T ss_pred HHhhhccCc-ccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HH
Confidence 111111111 1111223445699999999999999999999999999988888888999999999999999998875 45
Q ss_pred HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHH-hcC
Q 008389 256 SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMS-QKG 334 (567)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~-~~~ 334 (567)
..++.|+++++....++..+++.++++++|+++++|+++..+++........ ++++|.+++||++++++....+. .++
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-l~~lr~~~~gg~~~~~~~~~~~~~~~~ 306 (524)
T PRK06188 228 PTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRD-LSSLETVYYGASPMSPVRLAEAIERFG 306 (524)
T ss_pred HHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCC-CcceeEEEEcCCCCCHHHHHHHHHHhC
Confidence 6677888888888889999999999999999999999999999876655554 88999999999999999877776 458
Q ss_pred CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccc
Q 008389 335 FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMK 414 (567)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~ 414 (567)
..+++.||+||++..++.+....... .......++|.|++++ .++|+|++ +++++.| +.|||+++|+.++.
T Consensus 307 ~~~~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~G~p~~g~-~v~i~~~~-~~~~~~g--~~Gel~v~~~~~~~ 377 (524)
T PRK06188 307 PIFAQYYGQTEAPMVITYLRKRDHDP-----DDPKRLTSCGRPTPGL-RVALLDED-GREVAQG--EVGEICVRGPLVMD 377 (524)
T ss_pred chhhheeCccccCCceeecCchhccc-----cccccCCccccccCCc-EEEEEcCC-CCCCCCC--CeeEEEEECcchhh
Confidence 88999999999976655443211100 0122346789999999 89999987 8889888 78999999999999
Q ss_pred cccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCc
Q 008389 415 GYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGES 494 (567)
Q Consensus 415 gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 494 (567)
||++++..+...|.+|||+|||+|+++++|.+++.||.+|+|+++|++++|.+||+++.++++|.+++|++.+++..++.
T Consensus 378 gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 457 (524)
T PRK06188 378 GYWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEA 457 (524)
T ss_pred hhcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCce
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999998888889
Q ss_pred ceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCC
Q 008389 495 PCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGP 561 (567)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (567)
+.+++++.++. ..+. +++++++++.++.+..|..+++++ +|+|++||++|++|++.+.+...
T Consensus 458 ~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~~~ 520 (524)
T PRK06188 458 VTAVVVLRPGA-AVDA----AELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEGRG 520 (524)
T ss_pred EEEEEEECCCC-CCCH----HHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhhcc
Confidence 99999987654 3333 678899999999999999999888 99999999999999999977654
No 55
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-66 Score=539.80 Aligned_cols=488 Identities=21% Similarity=0.262 Sum_probs=403.7
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHc-cCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKR-SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
+.++.++|++.+. ++++|+++.++++||+||++++.++|..|.+. |++++++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 3478899988874 79999999999999999999999999999987 89999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+|+++.++.+++.++++.++++++|++++..+.+.... ....++.+.. ..+.+
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~-----------~~~~~~~~~~----------------~~~~~ 134 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD-----------PGVRVINVDS----------------PAWAD 134 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc-----------cCceEEEecc----------------ccHHH
Confidence 99999999999999999999999999987765433221 1112222221 12344
Q ss_pred HHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHH
Q 008389 178 FLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSL 257 (567)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~ 257 (567)
++..............++++++++|||||||.||+|+++|+++..........++++.+|++++.+|++|.+++...+..
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 214 (529)
T PRK07867 135 ELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAV 214 (529)
T ss_pred HhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHH
Confidence 44322211112223467899999999999999999999999999888888888899999999999999999998765554
Q ss_pred -hhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCe
Q 008389 258 -AALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFH 336 (567)
Q Consensus 258 -~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~ 336 (567)
+..|+++++...+++..+++.++++++|++.++|+.+..++......... ..++| +++||+.+++...++.+.++++
T Consensus 215 ~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~-~~~lr-~~~gg~~~~~~~~~~~~~~g~~ 292 (529)
T PRK07867 215 ALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDA-DNPLR-IVYGNEGAPGDIARFARRFGCV 292 (529)
T ss_pred HHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCccccc-ccceE-EEecCCCChHHHHHHHHHhCCc
Confidence 45566666667789999999999999999999999999988765433222 45677 4568888887765544467999
Q ss_pred eeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCc------------eEE
Q 008389 337 VTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKT------------IGE 404 (567)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~------------~Ge 404 (567)
+++.||+||++..+..+. . ...+.+|.|+++ ++++|++++.+++.+ + .||
T Consensus 293 l~~~YG~TE~~~~~~~~~---~----------~~~~~~g~~~~~---~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~Ge 354 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTP---D----------TPPGALGPLPPG---VAIVDPDTGTECPPA--EDADGRLLNADEAIGE 354 (529)
T ss_pred EEEeecccccccccccCC---C----------CCCCCcCCCCCC---EEEEECCCCCCCCCC--ccccccccccCCcceE
Confidence 999999999875543211 0 122567888887 567887778888877 5 799
Q ss_pred EEE-ecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEE
Q 008389 405 IVM-SGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASV 483 (567)
Q Consensus 405 i~v-~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 483 (567)
|++ +|++++.||+++++.+...|.+|||+|||+|+++++|.+++.||.+|+|+++|++++|.+||+++.++|+|.+++|
T Consensus 355 l~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V 434 (529)
T PRK07867 355 LVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAV 434 (529)
T ss_pred EEEecCCcccccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEE
Confidence 999 9999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc--CCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 484 VARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK--MPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~--l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
++.+++..|++++++++..++. ..+. ++++++++++ |+.+++|..+.+++ +|+|++||++|+.|+++..++.
T Consensus 435 ~g~~~~~~g~~~~a~vv~~~~~-~~~~----~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~~ 509 (529)
T PRK07867 435 YAVPDPVVGDQVMAALVLAPGA-KFDP----DAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDCA 509 (529)
T ss_pred EeccCCCCCeeEEEEEEECCCC-CCCH----HHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCCC
Confidence 9999998899999999988775 4455 5677777764 99999999999888 9999999999999999876553
No 56
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-66 Score=563.83 Aligned_cols=477 Identities=19% Similarity=0.240 Sum_probs=396.1
Q ss_pred CHHHHHhhhhhc--CCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 21 TPLWFLDRAATV--HPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 21 t~~~~l~~~a~~--~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
|+.++|.+.+.. +||++|+++. ..+||+||+++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 788999988876 7999999874 5899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|++|.++.+++.++++.++++++|++.+....+.. ..++. ...+
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~---------------~~~~~---------------------~~~~ 127 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQP---------------SRVAE---------------------AAEL 127 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc---------------cccch---------------------hhhh
Confidence 99999999999999999999999998654332211 00000 0000
Q ss_pred HhcCC-CCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHH-HHhccCCCcEEEEecCccchhhhHH-HH
Q 008389 179 LQTGD-PQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVA-LIWGMNEGAVYLWTLPMFHCNGWCY-TW 255 (567)
Q Consensus 179 l~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~g~~~-~~ 255 (567)
+.... .......+..++++++++|||||||.||+|.++|+++........ ..+++.++|++++..|++|.+++.. .+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 207 (705)
T PRK06060 128 MSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVW 207 (705)
T ss_pred hhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHH
Confidence 10000 000011234567899999999999999999999999988776654 4578899999999999999888753 44
Q ss_pred HHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc-
Q 008389 256 SLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK- 333 (567)
Q Consensus 256 ~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~- 333 (567)
..+..|+++++.. .+++..+...++++++|+++++|+++..+++..... . ++++|.+++||+++++++.+.+.+.
T Consensus 208 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~--~-~~slr~i~~gGe~l~~~~~~~~~~~~ 284 (705)
T PRK06060 208 FPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPD--S-FRSLRCVVSAGEALELGLAERLMEFF 284 (705)
T ss_pred HHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccc--c-ccceeEEEEecCcCCHHHHHHHHHHc
Confidence 5566788877765 468888999999999999999999999998754322 2 7889999999999999999998864
Q ss_pred -CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccc
Q 008389 334 -GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVV 412 (567)
Q Consensus 334 -~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~ 412 (567)
++++++.||+||++..+..+... ....+++|.|++++ .++|+|++ +++++.| +.|||+++|+.+
T Consensus 285 ~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~~-g~~~~~g--~~GEl~i~g~~v 349 (705)
T PRK06060 285 GGIPILDGIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAPD-GTTAGPG--VEGDLWVRGPAI 349 (705)
T ss_pred CCCceEeeeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECCC-CCCCCCC--CceEEEEccchh
Confidence 58999999999997554332111 11236789999999 89999987 8888888 789999999999
Q ss_pred cccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCC
Q 008389 413 MKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWG 492 (567)
Q Consensus 413 ~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g 492 (567)
+.||+++++.+.. .+|||+|||+|++++||++++.||.||+||++|++|++.+||.++.+++.|.+++|++.++...+
T Consensus 350 ~~GY~~~~~~~~~--~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~ 427 (705)
T PRK06060 350 AKGYWNRPDSPVA--NEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGA 427 (705)
T ss_pred hhhhhCCCccccc--CCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCC
Confidence 9999999886532 47899999999999999999999999999999999999999999999999999999999988878
Q ss_pred CcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHH
Q 008389 493 ESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKA 556 (567)
Q Consensus 493 ~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (567)
+.++++++...+. ..+. +...+++++++++|+.|++|..|++++ ||+|++||++|++|++.+
T Consensus 428 ~~~~a~vv~~~~~-~~~~-~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 428 STLQAFLVATSGA-TIDG-SVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred eeEEEEEEecccc-CcCh-HHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 8999999977653 2222 223678899999999999999999888 999999999999999865
No 57
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=5.4e-66 Score=543.83 Aligned_cols=501 Identities=27% Similarity=0.395 Sum_probs=414.4
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC--CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG--STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
..|+.++|.+.+.++|+++|+.+. ++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 106 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGV 106 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 478999999999999999999974 579999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYE 176 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
++|+++..+.+++.++++.++++++++++.....+... ...++.++.... .....|.
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~-------------~~~~i~~~~~~~----------~~~~~~~ 163 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL-------------GLPVIVLGEEKI----------EGAVNWK 163 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc-------------CCcEEEecCCCC----------CCcccHH
Confidence 99999999999999999999999999998876654321 122444433211 1223455
Q ss_pred HHHhcCCCCCC--CCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccC----CCcEEEEecCccchhh
Q 008389 177 KFLQTGDPQFD--WKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMN----EGAVYLWTLPMFHCNG 250 (567)
Q Consensus 177 ~~l~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~----~~d~~~~~~p~~~~~g 250 (567)
+++........ .......+++++++|||||||.||+|.++|.++..+.... .+++. ..++.+..+|++|.+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~~h~~g 241 (546)
T PLN02330 164 ELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSS--LFSVGPEMIGQVVTLGLIPFFHIYG 241 (546)
T ss_pred HHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHH--hhccCccccCceEEEEecChHHHHH
Confidence 55544322111 1223456789999999999999999999999988765432 23333 3467889999999999
Q ss_pred hHHHH-HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCC--chhhhhccCCCCCHHHH
Q 008389 251 WCYTW-SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLP--HVVHVNTAGAAPPPSVL 327 (567)
Q Consensus 251 ~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~--~lr~i~~~G~~l~~~~~ 327 (567)
+...+ ..+..|+++++...+++..+++.++++++|.+.++|+++..+++........ +. .+|.++++|+++++++.
T Consensus 242 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~~~l~~i~~~g~~l~~~~~ 320 (546)
T PLN02330 242 ITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFD-LSKLKLQAIMTAAAPLAPELL 320 (546)
T ss_pred HHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccc-cchheeeeEEEcCCcCCHHHH
Confidence 86544 4556688877778899999999999999999999999999998865443333 33 47889999999999999
Q ss_pred HHHHh-c-CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEE
Q 008389 328 HAMSQ-K-GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEI 405 (567)
Q Consensus 328 ~~~~~-~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei 405 (567)
+++.+ + ++++++.||+||++.+...+..... ........++|.|++++ +++|+|++++++++.| +.|||
T Consensus 321 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel 391 (546)
T PLN02330 321 TAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEK------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGEL 391 (546)
T ss_pred HHHHHHcCCCeEEecccccccccceecCCCccc------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEE
Confidence 99985 4 8999999999998755433211100 00112236789999999 8999998889999988 78999
Q ss_pred EEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEE
Q 008389 406 VMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVV 484 (567)
Q Consensus 406 ~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 484 (567)
+++|+.++.||+++++.+...| .+|||+|||+|++++||.+++.||.+|+|+++|.+|+|.+||.++.+++.|.+++|+
T Consensus 392 ~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~ 471 (546)
T PLN02330 392 CVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVV 471 (546)
T ss_pred EEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEE
Confidence 9999999999999998888777 479999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 485 ARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 485 ~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
+.++...|+.++++|+..++. ..+. ++++++++++|+.++.|+.+.+++ +|+|++||++|++|++++...
T Consensus 472 ~~~~~~~g~~~~a~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 472 PLPDEEAGEIPAACVVINPKA-KESE----EDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred eccccccCceeEEEEEECCCC-CCCH----HHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 999988889999999987654 3333 678899999999999999888877 999999999999999999766
No 58
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=6.2e-66 Score=541.27 Aligned_cols=500 Identities=24% Similarity=0.355 Sum_probs=411.4
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
|...|+.++|+++++.+|+++|+++.++++||+||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 20 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 20 WQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred ccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHH-HHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLA-EEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEY 175 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
++++++..+.+++.++++.+++++++++....... .......... ......++....... ....
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------------~~~~ 164 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSK---LPTLRNIIVAGQTRV------------EAEL 164 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhh---CCcceEEEEecCCCC------------cchh
Confidence 99999999999999999999999999987642211 1111111100 002223333221100 0011
Q ss_pred HHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH--
Q 008389 176 EKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY-- 253 (567)
Q Consensus 176 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-- 253 (567)
...+...... .......++++++++|||||||.||+|.++|.++..++......+.++.+|++++.+|++|.+++..
T Consensus 165 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~ 243 (527)
T TIGR02275 165 FLWLESPAEP-VKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPG 243 (527)
T ss_pred hHHhhCcCcc-ccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHH
Confidence 1112111111 1112346789999999999999999999999999988888777888999999999999999999864
Q ss_pred HHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-
Q 008389 254 TWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ- 332 (567)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~- 332 (567)
.+..+..|+++++...+++..+++.++++++|++.++|+++..+.+........ ++++|.+++||+++++++.+.+.+
T Consensus 244 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~~~~ 322 (527)
T TIGR02275 244 ALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYD-LSSLKLLQVGGAKFSEAAARRVPAV 322 (527)
T ss_pred HHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCC-ccceEEEEEcCCCCCHHHHHHHHHH
Confidence 556667788877777789999999999999999999999999998876554444 889999999999999999999985
Q ss_pred cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceec-cccceeEeeCCCCCccCCCCCceEEEEEeccc
Q 008389 333 KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFI-GLEKLDVIDTRTQQPVPADGKTIGEIVMSGNV 411 (567)
Q Consensus 333 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~ 411 (567)
++.++++.||+||++....... . .......++|.|++ +. .++|+|++ |++++.| +.|||+++|+.
T Consensus 323 ~g~~~~~~YG~tE~~~~~~~~~-~---------~~~~~~~~~G~~~~~~~-~v~i~d~~-g~~~~~g--~~Gei~v~g~~ 388 (527)
T TIGR02275 323 FGCQLQQVFGMAEGLVNYTRLD-D---------PAEIIFTTQGRPMSPDD-EVRVVDDH-GNPVAPG--ETGMLLTRGPY 388 (527)
T ss_pred hCCeEEeeeccCccCccccCCC-C---------ccccccccCCCCCCCCc-eEEEECCC-CCCCCCC--CceEEEecCCc
Confidence 5999999999999643222110 0 00112357899995 66 79999976 8888888 88999999999
Q ss_pred ccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCC
Q 008389 412 VMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADER 490 (567)
Q Consensus 412 ~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~ 490 (567)
++.||+++++.+...| .+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.++..
T Consensus 389 ~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~ 468 (527)
T TIGR02275 389 TFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDEL 468 (527)
T ss_pred cchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcc
Confidence 9999999999888777 589999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc-CCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 491 WGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK-MPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
.++.+++++++.++. .+. .+++++++++ ++.++.|..+.+++ ||+|++||++|+.|+
T Consensus 469 ~~~~~~a~vv~~~~~--~~~----~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 469 LGEKSCAFIVVRDPA--LKA----AQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred cccEEEEEEEECCCC--CCH----HHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 889999999887652 334 6788999875 99999999999888 999999999999874
No 59
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=6.2e-66 Score=541.15 Aligned_cols=499 Identities=25% Similarity=0.340 Sum_probs=420.9
Q ss_pred CHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeec
Q 008389 21 TPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 21 t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i 100 (567)
++.++|++.++.+|+++|+.+.++++||+||++++.++|+.|.+.|+.+||+|+++++|+.++++++|||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHh
Q 008389 101 NIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQ 180 (567)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (567)
++.++.+++..+++.+++++++++.+..+.+........ ....++.+++...... .......|+++..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 148 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH-------DLRTLILVGEPAHASE-----GGGESPSWPKLLA 148 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc-------ccceEEEecCcccccC-----CccccccHHHhhc
Confidence 999999999999999999999998876655544332221 2344555554321111 1222345565554
Q ss_pred cCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhh
Q 008389 181 TGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAAL 260 (567)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 260 (567)
..... ...+...+++++++|||||||.||+|.+||+++..++......+++..+|++++.+|++|.+|+...+.++..
T Consensus 149 ~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~ 226 (515)
T TIGR03098 149 LGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYV 226 (515)
T ss_pred ccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHc
Confidence 33221 1223456789999999999999999999999999888888788889999999999999999999888888889
Q ss_pred cCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--CCeee
Q 008389 261 CGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--GFHVT 338 (567)
Q Consensus 261 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~~~i~ 338 (567)
|+++++...+++..+++.++++++|++.++|+++..+.+..... .. ++++|.++++|+++++++.+.+.+. ++.++
T Consensus 227 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~-~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 304 (515)
T TIGR03098 227 GATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPE-SA-APSLRYLTNSGGAMPRATLSRLRSFLPNARLF 304 (515)
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCC-CC-ccceEEEEecCCcCCHHHHHHHHHHCCCCeEe
Confidence 99998888889999999999999999999999999998753322 22 7889999999999999999999864 78999
Q ss_pred eccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccC
Q 008389 339 HTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLK 418 (567)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~ 418 (567)
+.||+||++....... .......+.+|.|++++ .++|+|++ +.+++.+ +.|||+++|+.++.||++
T Consensus 305 ~~YG~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~~-~~~~~~~--~~Gel~v~g~~~~~gy~~ 370 (515)
T TIGR03098 305 LMYGLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRED-GSECAPG--EEGELVHRGALVAMGYWN 370 (515)
T ss_pred eeeccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECCC-CCCCCCC--CceEEEEcCchhhccccC
Confidence 9999999865433211 11122357899999999 89999965 8888877 789999999999999999
Q ss_pred CCccchhccc------------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 419 NPKANEETFA------------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 419 ~~~~~~~~~~------------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
+++.+...|. ++||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||+++.+++.|.+++|++.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 450 (515)
T TIGR03098 371 DPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGV 450 (515)
T ss_pred CchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEec
Confidence 9887766552 3489999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHH
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRA 554 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (567)
+++..|+.++++++...+. ..+. ++++++++++++.+++|..+++++ ||+|++||++|++|++
T Consensus 451 ~~~~~g~~~~~~~~~~~~~-~~~~----~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 451 PDPTLGQAIVLVVTPPGGE-ELDR----AALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred cCcccCceEEEEEEeCCCC-CCCH----HHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9988899999988865543 3444 678999999999999999999888 9999999999999974
No 60
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=7.4e-66 Score=542.09 Aligned_cols=501 Identities=27% Similarity=0.398 Sum_probs=409.8
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEEC------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHG------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
|.+.|+.++|++.++.+|+++|++.. ...+||+||++++.++|..|.+.|+++||+|+++++|++++++++|||
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~ 98 (538)
T TIGR03208 19 WRDRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLAC 98 (538)
T ss_pred cccCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 34568999999999999999999862 368999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHH-HHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccC
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLA-EEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALG 169 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (567)
+++|++++|+++.++.+++.++++.++++++++++...... ........ ........++.++...
T Consensus 99 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----------- 164 (538)
T TIGR03208 99 ARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQ---SKLPALRQVVVIDGDG----------- 164 (538)
T ss_pred HhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHh---ccCCcceEEEEecCCC-----------
Confidence 99999999999999999999999999999999987653110 01111111 0011223444443221
Q ss_pred CChHHHHHHHhcCCCCC-------CCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEe
Q 008389 170 RGAVEYEKFLQTGDPQF-------DWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWT 242 (567)
Q Consensus 170 ~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~ 242 (567)
...++.++....... .......++++++++|||||||.||+|.++|+++...+......++++.+|++++.
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~ 242 (538)
T TIGR03208 165 --DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMA 242 (538)
T ss_pred --CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEe
Confidence 112333332111000 01123456899999999999999999999999999988888888889999999999
Q ss_pred cCccchhhhHH-HHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCC
Q 008389 243 LPMFHCNGWCY-TWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAA 321 (567)
Q Consensus 243 ~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~ 321 (567)
+|++|..|+.. .+.++..|+++++...+++..+++.++++++|++.++|+++..+.......... ++++|.+++||++
T Consensus 243 ~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~ 321 (538)
T TIGR03208 243 SPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAP-VPSLFTFLCAGAP 321 (538)
T ss_pred CCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCC-CCcceEEEEcCCC
Confidence 99999988765 445566677777777789999999999999999999999999988765433333 7899999999999
Q ss_pred CCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCC
Q 008389 322 PPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGK 400 (567)
Q Consensus 322 l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 400 (567)
+++++.+++.+ +++++++.||+||++++...+.... .......+|.|++++ .++|+|++ +++++.|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~~-~~~~~~g-- 388 (538)
T TIGR03208 322 IPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDAN-GAKLSQG-- 388 (538)
T ss_pred CCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECCC-CCCCcCC--
Confidence 99999998874 5899999999999977654432110 111235689999999 89999976 8888887
Q ss_pred ceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCcee
Q 008389 401 TIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLE 480 (567)
Q Consensus 401 ~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~ 480 (567)
+.|||+++|+.++.||+++++.+.. ..+|||+|||+|+++++|.++++||.+|+|+.+|++|+|.+||+++.++++|.+
T Consensus 389 ~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~ 467 (538)
T TIGR03208 389 ETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQ 467 (538)
T ss_pred CCcEEEEecCcccccccCCcccccc-cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceee
Confidence 7899999999999999999877643 368999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHh-cCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 481 ASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRA-KMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 481 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
++|++.++...|+.+.+++++.++. ..+. +++.+++++ +++.+++|..+.+++ +|+|++||++|++|+
T Consensus 468 ~~v~~~~~~~~g~~~~a~v~~~~~~-~~~~----~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 468 VAIVAYPDERLGERACAVVVPKPGC-TLDF----AAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred EEEEeccCCCCCceEEEEEEECCCC-CCCH----HHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 9999999888889999999987764 4444 567888885 799999999999888 999999999999986
No 61
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1e-66 Score=559.18 Aligned_cols=518 Identities=21% Similarity=0.256 Sum_probs=398.2
Q ss_pred cCHHHHHhhhhhcCCCceeEEEC------------C-----------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEE
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHG------------S-----------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAII 76 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~ 76 (567)
.|+.++|++.++.+||++|+.+. + +++||+||.+++.++|+.|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 68999999999999999999542 1 238999999999999999999999999999999
Q ss_pred cCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecC
Q 008389 77 APNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGD 156 (567)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 156 (567)
++|+++|++++|||+++|++++|+++.++.+++.++++.++++++|++.+....+......++ ..+.++.+++
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~-------~l~~ii~~~~ 210 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLE-------TVKRVIYMDD 210 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccC-------CceEEEEECC
Confidence 999999999999999999999999999999999999999999999999877665554433332 4567777764
Q ss_pred CCCCccc-chhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh-ccC
Q 008389 157 ESCDPKD-LKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW-GMN 234 (567)
Q Consensus 157 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~ 234 (567)
....... ..........+|++++..+...........++|+++|+|||||||.||||.+||++++.++......+ ++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~ 290 (696)
T PLN02387 211 EGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLG 290 (696)
T ss_pred CCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCC
Confidence 3211100 00001112345666665443222222334678999999999999999999999999998887766554 578
Q ss_pred CCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccC------C--HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC--
Q 008389 235 EGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQV------T--AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED-- 304 (567)
Q Consensus 235 ~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~------~--~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-- 304 (567)
++|++++.+|++|.+++.....++..|+++.+-... + +..++..+++++||++.++|.+++.+.+.....
T Consensus 291 ~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~ 370 (696)
T PLN02387 291 KNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVD 370 (696)
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHh
Confidence 999999999999999988766666666665443221 1 234567899999999999999999987431100
Q ss_pred -----------------------------C---------------cCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeee
Q 008389 305 -----------------------------T---------------ILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTH 339 (567)
Q Consensus 305 -----------------------------~---------------~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~ 339 (567)
. ....+++|.+++||+++++++.++++. +++++++
T Consensus 371 ~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~ 450 (696)
T PLN02387 371 AKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQ 450 (696)
T ss_pred cccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeE
Confidence 0 000157899999999999999888884 6999999
Q ss_pred ccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccC-CCCCceEEEEEecccccccccC
Q 008389 340 TYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVP-ADGKTIGEIVMSGNVVMKGYLK 418 (567)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~-~~~~~~Gei~v~~~~~~~gy~~ 418 (567)
.||+||+++.++.+... ....+++|.|+|++ +++|+|.+++.... ......|||+++|++++.|||+
T Consensus 451 ~YG~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~ 518 (696)
T PLN02387 451 GYGLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFK 518 (696)
T ss_pred eechhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhcC
Confidence 99999998766543211 11247899999999 89999944343221 1111459999999999999999
Q ss_pred CCccchhccc---CC--ccccCceEEEeCCCcEEEeccccceeee-CceecchHHHHHHHhcCCCceeeEEEEeecCCCC
Q 008389 419 NPKANEETFA---NG--WYHTGDLGVKHPDNYIEIKDRSKDIIIS-GGENISSVEVENMMYLHPAVLEASVVARADERWG 492 (567)
Q Consensus 419 ~~~~~~~~~~---~g--~~~TGDl~~~~~~g~l~~~GR~~d~i~~-~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g 492 (567)
+++.+.+.|. +| ||+|||+|++|+||++++.||.+|+||. +|++|+|.+||+++.++|.|.+++|++.+..
T Consensus 519 ~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~--- 595 (696)
T PLN02387 519 NQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH--- 595 (696)
T ss_pred CHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---
Confidence 9999999883 35 9999999999999999999999999996 7999999999999999999999999987632
Q ss_pred CcceEEEEEcCCcc------------c--------hhhHHHHHHHHHHH-HhcCCCCCCCceeecCc--cc-----CCCC
Q 008389 493 ESPCAFVTLKPEVD------------K--------SNEQQLAEDIMKFC-RAKMPAYWVPKSIVFGP--LP-----KTAT 544 (567)
Q Consensus 493 ~~~~~~v~~~~~~~------------~--------~~~~~~~~~l~~~l-~~~l~~~~~p~~i~~~~--lP-----~t~~ 544 (567)
..++++|++.++.- . ...+.+.+.+.+.. +++|+.+.+|+.|.+.+ +. .|++
T Consensus 596 ~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t 675 (696)
T PLN02387 596 SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAA 675 (696)
T ss_pred ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChh
Confidence 34788888765310 0 00112223333332 34699999999998766 32 7889
Q ss_pred ccccHHHHHHHHHHc
Q 008389 545 GKIQKHVLRAKAKEM 559 (567)
Q Consensus 545 GKi~r~~l~~~~~~~ 559 (567)
.|++|+.+++.|++.
T Consensus 676 ~K~~R~~i~~~y~~~ 690 (696)
T PLN02387 676 LKLKREQIRKKFKDD 690 (696)
T ss_pred hhhhhHHHHHHHHHH
Confidence 999999999999874
No 62
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.4e-66 Score=554.82 Aligned_cols=520 Identities=21% Similarity=0.267 Sum_probs=396.4
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC----C-----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHh
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG----S-----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFG 89 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 89 (567)
..|++++|++.++++|+++|+.+. + .++||+|+.+++.++|..|.+.|+++||+|+|+++|+++|++++||
T Consensus 41 ~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA 120 (660)
T PLN02430 41 ITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEA 120 (660)
T ss_pred CCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 368999999999999999999752 1 2479999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccC
Q 008389 90 VPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALG 169 (567)
Q Consensus 90 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (567)
|+++|++++|+++.++++++.++++.++++++|++......... .... .......++.++.............+
T Consensus 121 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~--~~~~----~~~~l~~ii~~~~~~~~~~~~~~~~~ 194 (660)
T PLN02430 121 CAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLE--PDCK----SAKRLKAIVSFTSVTEEESDKASQIG 194 (660)
T ss_pred HHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHh--hhcc----cCCCceEEEEECCCChHHhhhhhcCC
Confidence 99999999999999999999999999999999998753221111 0000 00134556666432111000000011
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---h--ccCCCcEEEEecC
Q 008389 170 RGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---W--GMNEGAVYLWTLP 244 (567)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~--~~~~~d~~~~~~p 244 (567)
....+|++++..+........+..++++++++|||||||.||||.+||+++..++...... + +++++|++++.+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lP 274 (660)
T PLN02430 195 VKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLP 274 (660)
T ss_pred cEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCc
Confidence 1234677776554322222233467899999999999999999999999998877654332 2 4678999999999
Q ss_pred ccchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC---------------------
Q 008389 245 MFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--------------------- 303 (567)
Q Consensus 245 ~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--------------------- 303 (567)
++|.+++......+..|+++++.. .++..+++.|++++||++.++|.+|+.+.+....
T Consensus 275 l~H~~~~~~~~~~l~~G~~i~~~~-~~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 353 (660)
T PLN02430 275 LAHILDRMIEEYFFRKGASVGYYH-GDLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKL 353 (660)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeC-CChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999877666666677766654 4788999999999999999999999887642100
Q ss_pred ------------CCc-----------CCCCchhhhhccCCCCCHHHHHHHHhcC-CeeeeccCCccCcCCcccccCCCCC
Q 008389 304 ------------DTI-----------LPLPHVVHVNTAGAAPPPSVLHAMSQKG-FHVTHTYGLSETYGPSTVCAWKPEW 359 (567)
Q Consensus 304 ------------~~~-----------~~l~~lr~i~~~G~~l~~~~~~~~~~~~-~~i~~~YG~tE~~~~~~~~~~~~~~ 359 (567)
... ...+++|.+++||+++++++.++++..+ +.+++.||+||+++.++.....
T Consensus 354 ~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~--- 430 (660)
T PLN02430 354 AWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPD--- 430 (660)
T ss_pred HHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccc---
Confidence 000 0015789999999999999988777765 6899999999998766543211
Q ss_pred CCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEE
Q 008389 360 DSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGV 439 (567)
Q Consensus 360 ~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~ 439 (567)
.....+++|.|.+++ ++++.|.......+.+.+..|||+|+|++++.|||++++.+...|.+|||+|||+|+
T Consensus 431 -------~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~ 502 (660)
T PLN02430 431 -------EMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGE 502 (660)
T ss_pred -------cCCCCCCccCCCCce-EEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEE
Confidence 012247899999999 899987322222222322579999999999999999999999999999999999999
Q ss_pred EeCCCcEEEeccccceee-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc-----------c
Q 008389 440 KHPDNYIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD-----------K 507 (567)
Q Consensus 440 ~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~-----------~ 507 (567)
+++||++++.||.+|+|+ .+|++|+|.+||+++.++|.|.+++|++.. .++.++|+|+++++.- .
T Consensus 503 ~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~~~~~~~~~~~~~~~~ 579 (660)
T PLN02430 503 ILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNEENTNKWAKDNGFTGS 579 (660)
T ss_pred ECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCHHHHHHHHHhCCCCCC
Confidence 999999999999999999 579999999999999999999999999843 2467899998865320 0
Q ss_pred ----hhhHHHH----HHHHHHH-HhcCCCCCCCceeecCc--c-----cCCCCccccHHHHHHHHHHc
Q 008389 508 ----SNEQQLA----EDIMKFC-RAKMPAYWVPKSIVFGP--L-----PKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 508 ----~~~~~~~----~~l~~~l-~~~l~~~~~p~~i~~~~--l-----P~t~~GKi~r~~l~~~~~~~ 559 (567)
.+..++. +++.+.. +++|+.+.+++.+.+.+ + .+|+++|++|+.+.+.|++.
T Consensus 580 ~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~ 647 (660)
T PLN02430 580 FEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVE 647 (660)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHH
Confidence 0011223 3333333 23599999999998765 3 28999999999999988764
No 63
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=4.2e-65 Score=533.19 Aligned_cols=496 Identities=24% Similarity=0.354 Sum_probs=417.6
Q ss_pred ccCHHHHHhhhhhcCCCceeEEE-CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVH-GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
..++.+++.+.+ .+|+++|+.+ .++.+||.||.+++.++|..|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 458899999999 9999999998 56789999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+|+++..+.+++..+++.+++++++++....+.+....... ....++.++.... ..+.+
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~ 139 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA--------GAPHVETLDADGT-------------GSLLE 139 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc--------CCceEEEecCCCc-------------ccHHH
Confidence 99999999999999999999999999987766554432211 1222444432211 11111
Q ss_pred HHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHH-H
Q 008389 178 FLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW-S 256 (567)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~-~ 256 (567)
....... .........+++++++|||||||.||+|.++|+++...+......+++..+|++++.+|++|..|+...+ .
T Consensus 140 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 218 (504)
T PRK07514 140 AAAAAPD-DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNV 218 (504)
T ss_pred hhhhcCc-ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHH
Confidence 1111111 1112335678999999999999999999999999999988888888899999999999999999987544 4
Q ss_pred HhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-cCC
Q 008389 257 LAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGF 335 (567)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~ 335 (567)
....|++++..+..++..+++.+ .++|.+.++|+++..+++........ ++++|.+++||+++++++.+.+.+ .++
T Consensus 219 ~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~~~~~~~~~~~~~~~~ 295 (504)
T PRK07514 219 ALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREA-AAHMRLFISGSAPLLAETHREFQERTGH 295 (504)
T ss_pred HHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCccc-ccceeeEEecCCCCCHHHHHHHHHHhCC
Confidence 55667777777778999999999 47999999999999998775544444 789999999999999999999985 588
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKG 415 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~g 415 (567)
++++.||+||++....... . .......+|.|++++ .++|+|++++.+++.| +.|||+++|+.++.|
T Consensus 296 ~~~~~YG~tE~~~~~~~~~-~----------~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~g 361 (504)
T PRK07514 296 AILERYGMTETNMNTSNPY-D----------GERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKG 361 (504)
T ss_pred cceeecccccccccccCCc-c----------ccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCcccc
Confidence 9999999999865433211 0 112236789999999 8999997889999988 789999999999999
Q ss_pred ccCCCccchhccc-CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCc
Q 008389 416 YLKNPKANEETFA-NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGES 494 (567)
Q Consensus 416 y~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 494 (567)
|+++++.+...|. +|||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||..+.++++|.+++|++.++...|+.
T Consensus 362 y~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 441 (504)
T PRK07514 362 YWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEG 441 (504)
T ss_pred ccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCce
Confidence 9999999988885 899999999999999999999999999999999999999999999999999999999998887888
Q ss_pred ceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 495 PCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
++++++..++. ..+. +++++.++++++++++|..+++++ +|+|++||++|++|++++.+.
T Consensus 442 ~~~~~~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 442 VTAVVVPKPGA-ALDE----AAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred EEEEEEECCCC-CCCH----HHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 99999987654 3344 678899999999999999999888 999999999999999998764
No 64
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.9e-66 Score=550.12 Aligned_cols=504 Identities=21% Similarity=0.260 Sum_probs=395.2
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECC---------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHH
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGS---------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHF 88 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~l 88 (567)
+.+|+.++++++++++|+++|+++.+ +++||+||.+++.++|++|.+. +++||+|+++++|++++++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 34799999999999999999998732 4899999999999999999986 9999999999999999999999
Q ss_pred hhhhcCCeeeec-cccCC--hHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccch
Q 008389 89 GVPMAGAVLNAV-NIRLN--APTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLK 165 (567)
Q Consensus 89 A~~~~G~~~v~i-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (567)
||+++|++++|+ ++.++ .+++.++++.++++++|++.+..+.+......+.. .....++.++....
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~------ 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPR-----LRRPRVIAIDAIPD------ 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhccc-----ccCceEEEeccccc------
Confidence 999999999999 57666 78999999999999999988776555443222110 01123444332100
Q ss_pred hccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc-cCCCcEEEEecC
Q 008389 166 YALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG-MNEGAVYLWTLP 244 (567)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~~~~~p 244 (567)
...... ...+..++++++|+|||||||.||||.++|+++.+++......++ +.+++++++.+|
T Consensus 180 ---------------~~~~~~-~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~P 243 (612)
T PRK12476 180 ---------------SAGESF-VPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLP 243 (612)
T ss_pred ---------------cccccc-cCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCC
Confidence 000000 011245689999999999999999999999999888777666677 788999999999
Q ss_pred ccchhhhHHHHHHhhhcCeeEEecc--C--CHHHHHHHHH--hhCceEeeeCcHHHHHHHcCCC----CCCcCCCCchhh
Q 008389 245 MFHCNGWCYTWSLAALCGTSICLRQ--V--TAKAVYSAIA--KYGVTHFCAAPVVLNSIVNAPS----EDTILPLPHVVH 314 (567)
Q Consensus 245 ~~~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~----~~~~~~l~~lr~ 314 (567)
++|..|+...+..++.|++.+++.+ + ++..+++.++ +++++.+..+|+++..++.... ..... ++++|
T Consensus 244 l~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~-l~~lr- 321 (612)
T PRK12476 244 LYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDID-LSNVV- 321 (612)
T ss_pred cccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcc-hhHhe-
Confidence 9999999887888888888887753 2 7899999995 5899999999999888776421 12223 78899
Q ss_pred hhccCCCCCHHHHHHHHhc----CC---eeeeccCCccCcCCcccccCCCCC-----C-----------CCChhhhhhhh
Q 008389 315 VNTAGAAPPPSVLHAMSQK----GF---HVTHTYGLSETYGPSTVCAWKPEW-----D-----------SLPPETQARMK 371 (567)
Q Consensus 315 i~~~G~~l~~~~~~~~~~~----~~---~i~~~YG~tE~~~~~~~~~~~~~~-----~-----------~~~~~~~~~~~ 371 (567)
+++||+++++++.+.+.+. |+ ++++.||+||++..++........ . ..+........
T Consensus 322 ~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 401 (612)
T PRK12476 322 LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAH 401 (612)
T ss_pred EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCccee
Confidence 9999999999999998753 43 499999999987554332111000 0 00000000123
Q ss_pred ccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhccc-------------------CCcc
Q 008389 372 ARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFA-------------------NGWY 432 (567)
Q Consensus 372 ~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-------------------~g~~ 432 (567)
+++|.|++++ ++.|+|++++++++.| +.|||+++|++++.|||++++.+.+.|. ++||
T Consensus 402 ~~~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~ 478 (612)
T PRK12476 402 VSCGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWL 478 (612)
T ss_pred EeCCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCee
Confidence 5789999999 8999998879999988 8999999999999999999999988874 2599
Q ss_pred ccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhc-CCCcee--eEEEEeecCCCCCcceEEEEEcCCccchh
Q 008389 433 HTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYL-HPAVLE--ASVVARADERWGESPCAFVTLKPEVDKSN 509 (567)
Q Consensus 433 ~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~i~~--~~v~~~~~~~~g~~~~~~v~~~~~~~~~~ 509 (567)
+|||+|+++ ||+++++||++|+||++|++|+|.+||+++.+ +|.|.+ +++++.+++. +++++++++++++....+
T Consensus 479 ~TGDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~ 556 (612)
T PRK12476 479 RTGDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRAD 556 (612)
T ss_pred eccccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCccccc
Confidence 999999985 99999999999999999999999999999985 799999 6677888776 789999999887643345
Q ss_pred hHHHHHHHHHHHHhcCC-CCCC-CceeecCc---ccCCCCccccHHHHHHHHHHcC
Q 008389 510 EQQLAEDIMKFCRAKMP-AYWV-PKSIVFGP---LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 510 ~~~~~~~l~~~l~~~l~-~~~~-p~~i~~~~---lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
.+ ++.+++++.+. .+.+ |..+.|++ ||+|++||++|++|++++.+..
T Consensus 557 ~~----~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~ 608 (612)
T PRK12476 557 PA----PAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGR 608 (612)
T ss_pred HH----HHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCC
Confidence 53 44445555544 3556 56777654 9999999999999999987764
No 65
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3.1e-65 Score=535.52 Aligned_cols=499 Identities=25% Similarity=0.386 Sum_probs=408.9
Q ss_pred cCHHHHHhhhhhcCCCceeEEECC-----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGS-----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
-|+.++|++.++++|+++|+++.+ +.+||.||+++++++|..|.++|+++||+|+++++|++++++++|||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 379999999999999999999864 789999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++++++++..+.+++.++++.+++++++++.+..+.+.+...... .....++..+..... ......
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--------~~~~~~ 152 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDA------TPLRHICLTRVALPA--------DDGVSS 152 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcc------ccCcEEEEecCCCcc--------cccccC
Confidence 999999999999999999999999999999887766655433221 123444444432111 112234
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHH
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYT 254 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (567)
++++............+...+++++++|||||||.||+|.++|.++............+..++++++.+|++|..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (517)
T PRK08008 153 FTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTA 232 (517)
T ss_pred HHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHH
Confidence 44444333222222233456899999999999999999999999998654433333457889999999999998776554
Q ss_pred -HHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-
Q 008389 255 -WSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ- 332 (567)
Q Consensus 255 -~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~- 332 (567)
+..+..|+++++...+++..+++.++++++|++.++|++++.+.......... ...++.+.++ .+++++....+.+
T Consensus 233 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~~-~~~~~~~~~~~~~~ 310 (517)
T PRK08008 233 AMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDR-QHCLREVMFY-LNLSDQEKDAFEER 310 (517)
T ss_pred HHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccc-cccceeeEEe-cCCCHHHHHHHHHH
Confidence 44555677777777889999999999999999999999999988765433322 4567766665 4788888887774
Q ss_pred cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec---
Q 008389 333 KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG--- 409 (567)
Q Consensus 333 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~--- 409 (567)
+++++++.||+||+++.+....... .....++|.|++++ +++|+|++ +++++.| +.|||+++|
T Consensus 311 ~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~ 376 (517)
T PRK08008 311 FGVRLLTSYGMTETIVGIIGDRPGD----------KRRWPSIGRPGFCY-EAEIRDDH-NRPLPAG--EIGEICIKGVPG 376 (517)
T ss_pred hCCeEEeeccccccccccccCCccc----------cccCCccccCCCCc-EEEEECCC-CCCCCCC--CcceEEEeCCCC
Confidence 5999999999999976554322111 12236799999999 89999976 8899888 789999998
Q ss_pred ccccccccCCCccchhccc-CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeec
Q 008389 410 NVVMKGYLKNPKANEETFA-NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARAD 488 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 488 (567)
+.++.||+++++.+.+.|. +|||+|||+|+++++|.+++.||.+|+|+.+|++++|.+||.++.+++.|.+++|++.++
T Consensus 377 ~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~ 456 (517)
T PRK08008 377 KTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKD 456 (517)
T ss_pred cchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCC
Confidence 5899999999999988884 899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 489 ERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
...++.+.++++++++. ..+. ++++++++++++.+++|..+.+++ +|+|++||++|+.|+
T Consensus 457 ~~~~~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 457 SIRDEAIKAFVVLNEGE-TLSE----EEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred CCCCceEEEEEEECCCC-CCCH----HHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 88788999999988765 3344 688899999999999999999888 999999999999874
No 66
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=5.1e-65 Score=534.85 Aligned_cols=505 Identities=23% Similarity=0.364 Sum_probs=412.6
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
.|.+.++.++|+++++ |+++|+++.++++||+||++++.++|..|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 21 ~~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~ 98 (536)
T PRK10946 21 YWQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGV 98 (536)
T ss_pred eecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCe
Confidence 3567899999999887 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchHHH-HHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLA-EEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
+++++.+.....++..+++.+++++++++.+..... ......+... ......++..... ....
T Consensus 99 v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~-------------~~~~ 162 (536)
T PRK10946 99 APVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAE---HSSLRVVLLLNDD-------------GEHS 162 (536)
T ss_pred EEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhh---CCCceEEEEecCC-------------CCcc
Confidence 888777777788899999999999999986532110 0111111110 0022222222211 1122
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH-
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY- 253 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~- 253 (567)
+++++....... ...+..++++++++|||||||.||+|.++|+++...+......++++.+|++++.+|++|.+++..
T Consensus 163 ~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~ 241 (536)
T PRK10946 163 LDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSP 241 (536)
T ss_pred HHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhh
Confidence 334443332211 123346789999999999999999999999999999888888889999999999999999888763
Q ss_pred -HHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC-CcCCCCchhhhhccCCCCCHHHHHHHH
Q 008389 254 -TWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED-TILPLPHVVHVNTAGAAPPPSVLHAMS 331 (567)
Q Consensus 254 -~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~-~~~~l~~lr~i~~~G~~l~~~~~~~~~ 331 (567)
.+.++..|+++++...+++..++++++++++|++.++|..+..+++..... ....++++|.+++||+++++++.+.+.
T Consensus 242 ~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~ 321 (536)
T PRK10946 242 GALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIP 321 (536)
T ss_pred hHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHH
Confidence 456677788887777889999999999999999999999999998753211 112277899999999999999999987
Q ss_pred h-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCcee-ccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 332 Q-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRF-IGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 332 ~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
+ +++++++.||+||+..... .... .......++|.|+ |++ .++|+|.+ +++++.| +.|||+++|
T Consensus 322 ~~~g~~~~~~YG~tE~~~~~~-~~~~---------~~~~~~~~~G~p~~~~~-~v~i~d~~-~~~~~~g--~~Gel~v~g 387 (536)
T PRK10946 322 AELGCQLQQVFGMAEGLVNYT-RLDD---------SDERIFTTQGRPMSPDD-EVWVADAD-GNPLPQG--EVGRLMTRG 387 (536)
T ss_pred HhcCCeEEEeecccccceeee-cCCC---------ccccccccCCcccCCCc-eEEEECCC-CCCCCCC--CccEEEEec
Confidence 4 5999999999999643222 1111 0112346789998 677 79999976 8889888 899999999
Q ss_pred ccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeec
Q 008389 410 NVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARAD 488 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~ 488 (567)
+.++.||+++++.+...| .++||+|||+|+++++|++++.||.+|+++++|++++|.+||..|.++++|.+++|++.++
T Consensus 388 ~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 467 (536)
T PRK10946 388 PYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMED 467 (536)
T ss_pred CccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCC
Confidence 999999999999998888 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc-CCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 489 ERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK-MPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 489 ~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
...|+.+++++++.++ .+. .++++++++. +++|+.|..+.+++ +|+|++||++|++|++++.+..
T Consensus 468 ~~~g~~~~a~vv~~~~---~~~----~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~ 534 (536)
T PRK10946 468 ELMGEKSCAFLVVKEP---LKA----VQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRA 534 (536)
T ss_pred cccCceEEEEEEeCCC---CCH----HHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhc
Confidence 8888999999987654 233 5788888876 99999999999888 9999999999999999987764
No 67
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-65 Score=538.52 Aligned_cols=507 Identities=24% Similarity=0.357 Sum_probs=408.3
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHc-cCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKR-SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+++.++|++++.++|+++|+.+.++++||.||.++++++|..|.+. |+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v 103 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 5899999999999999999999889999999999999999999985 999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCC--C-----------C--ccc
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDES--C-----------D--PKD 163 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-----------~--~~~ 163 (567)
++++.++.+++.++++.++++++++++...+......... ....++...... . . ...
T Consensus 104 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
T PRK12492 104 NTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT--------GIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKM 175 (562)
T ss_pred ccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc--------CceEEEeechhhccccccchhccccccccccc
Confidence 9999999999999999999999999876655443322110 011111110000 0 0 000
Q ss_pred chhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc---------cC
Q 008389 164 LKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG---------MN 234 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---------~~ 234 (567)
...........+++++...........+...+++++++|||||||.||+|.++|+++..+.......+. +.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 176 VPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred ccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 000000122345555443322111122345688999999999999999999999999877766555442 23
Q ss_pred CC-cEEEEecCccchhhhHHHHHHh-hhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCc
Q 008389 235 EG-AVYLWTLPMFHCNGWCYTWSLA-ALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPH 311 (567)
Q Consensus 235 ~~-d~~~~~~p~~~~~g~~~~~~~~-~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~ 311 (567)
.+ ++++..+|++|.+|+...+... ..|+..++. ...++..+++.++++++|++.++|+++..+.+........ +++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~ 334 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLD-FSA 334 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccc-ccc
Confidence 33 5678899999999987555544 445555544 3468899999999999999999999999998876555444 789
Q ss_pred hhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCC
Q 008389 312 VVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTR 390 (567)
Q Consensus 312 lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~ 390 (567)
+|.+++||+++++++.+.+.+ +++++++.||+||++++++.+.... ....+.+|.|++++ .++|+|++
T Consensus 335 lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~~ 403 (562)
T PRK12492 335 LKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDDD 403 (562)
T ss_pred eeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECCC
Confidence 999999999999999999885 5999999999999987665432211 11236789999999 89999986
Q ss_pred CCCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHH
Q 008389 391 TQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVE 469 (567)
Q Consensus 391 ~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE 469 (567)
+.+++.+ +.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+.+|++++|.+||
T Consensus 404 -~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE 480 (562)
T PRK12492 404 -GNELPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE 480 (562)
T ss_pred -CCCCCCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHH
Confidence 8888887 789999999999999999999988888 479999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCcccc
Q 008389 470 NMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQ 548 (567)
Q Consensus 470 ~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (567)
..+.+++.|.+++|++.++...++.++++++..+. ..+. ++++++++++++.+.+|..+.+++ +|+|++||++
T Consensus 481 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~~----~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~ 554 (562)
T PRK12492 481 DVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDP--GLSV----EELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKIL 554 (562)
T ss_pred HHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCC--CCCH----HHHHHHHHHhcccccCCcEEEEeccCCCCCCCcee
Confidence 99999999999999999988888889998886543 2233 678899999999999999999888 9999999999
Q ss_pred HHHHHHH
Q 008389 549 KHVLRAK 555 (567)
Q Consensus 549 r~~l~~~ 555 (567)
|++|+++
T Consensus 555 r~~L~~~ 561 (562)
T PRK12492 555 RRELRDI 561 (562)
T ss_pred HHHHHhh
Confidence 9999875
No 68
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-65 Score=536.54 Aligned_cols=519 Identities=23% Similarity=0.274 Sum_probs=415.9
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
...++.++|++.+..+|+++|++..++++||+||.+++.++|+.|.+.|+++||+|+++++|+.++++++|||+++|+++
T Consensus 8 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~ 87 (540)
T PRK06164 8 RADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATV 87 (540)
T ss_pred CCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEE
Confidence 35689999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHH-HHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKL-AEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYE 176 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
+|+++..+.+++.++++.+++++++++.+.... +.+....... ........++.++....... ......+.
T Consensus 88 v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 159 (540)
T PRK06164 88 IAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPP--DALPPLRAIAVVDDAADATP------APAPGARV 159 (540)
T ss_pred EecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccc--cccCCcceEEEeccCcccCC------CCCccccc
Confidence 999999999999999999999999998765221 1111111100 00012334444432111000 00000111
Q ss_pred HHHhcCCCC---CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH
Q 008389 177 KFLQTGDPQ---FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY 253 (567)
Q Consensus 177 ~~l~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (567)
......... .........+++++++|||||||.||+|.++|.++..+.......+++..++++++.+|++|.+|+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~ 239 (540)
T PRK06164 160 QLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFST 239 (540)
T ss_pred ccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHH
Confidence 111111100 00011234678999999999999999999999999999888888889999999999999999999987
Q ss_pred HHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccC-CCCCHHHHHHHHh
Q 008389 254 TWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAG-AAPPPSVLHAMSQ 332 (567)
Q Consensus 254 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G-~~l~~~~~~~~~~ 332 (567)
.+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+... .... +++++.+..+| .+...+..+++.+
T Consensus 240 ~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~-~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~ 317 (540)
T PRK06164 240 LLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAG-ERAD-FPSARLFGFASFAPALGELAALARA 317 (540)
T ss_pred HHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhc-ccCC-CcceeeeeeccCCcchHHHHHHHhh
Confidence 7777778888877788899999999999999999999999999988722 2223 78888776665 5666777777777
Q ss_pred cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCcee-ccccceeEeeCCCCCccCCCCCceEEEEEeccc
Q 008389 333 KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRF-IGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNV 411 (567)
Q Consensus 333 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~ 411 (567)
.++++++.||+||++++++....... ........|.+. +++ .++|+|++++.+++.| +.|||+++|++
T Consensus 318 ~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g~~ 386 (540)
T PRK06164 318 RGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEIEIRAPS 386 (540)
T ss_pred cCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEEEEeccc
Confidence 79999999999999876554332111 011123456665 677 8999998889999888 89999999999
Q ss_pred ccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCC
Q 008389 412 VMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADER 490 (567)
Q Consensus 412 ~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~ 490 (567)
++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.+.++++|.+++|++.+..
T Consensus 387 ~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~~- 465 (540)
T PRK06164 387 LMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATRD- 465 (540)
T ss_pred ccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCCC-
Confidence 9999999999998888 47899999999999999999999999999999999999999999999999999999998843
Q ss_pred CCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCc---cccHHHHHHHHHHcCCcc
Q 008389 491 WGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATG---KIQKHVLRAKAKEMGPVR 563 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~G---Ki~r~~l~~~~~~~~~~~ 563 (567)
.+..+++++++.++. ..+. +++.++++++++.+++|..+.+++ +|+|++| |++|++|++++++..-.+
T Consensus 466 ~~~~~~~~vv~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~~ 537 (540)
T PRK06164 466 GKTVPVAFVIPTDGA-SPDE----AGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAAE 537 (540)
T ss_pred CceeEEEEEEeCCCC-CCCH----HHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhhh
Confidence 457889999887765 3444 688899999999999999999888 9999998 999999999988765443
No 69
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-65 Score=534.94 Aligned_cols=488 Identities=23% Similarity=0.304 Sum_probs=394.1
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccC-CCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSI-GLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
+.|+.++|.+++ +|+++|+++.+.++||.||.+++.++|..|.+.|+ .+||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~ 79 (540)
T PRK13388 2 RDTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVL 79 (540)
T ss_pred chhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEE
Confidence 457888888765 79999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+|++|.++.+++.++++.++++++|++.+....+.+.. . ....++.++.. .+.+
T Consensus 80 v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~--------~~~~~i~~~~~----------------~~~~ 133 (540)
T PRK13388 80 VGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--L--------PGVRVLDVDTP----------------AYAE 133 (540)
T ss_pred EEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--c--------cCceEEEccch----------------hhhh
Confidence 99999999999999999999999999887655443210 0 11223333211 1233
Q ss_pred HHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHH-
Q 008389 178 FLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWS- 256 (567)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~- 256 (567)
++..... ..+.....++++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|.+++...+.
T Consensus 134 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~ 212 (540)
T PRK13388 134 LVAAAGA-LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAP 212 (540)
T ss_pred hhccccC-cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHH
Confidence 3321111 11112346689999999999999999999999999988888888889999999999999999998876555
Q ss_pred HhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHH-hcCC
Q 008389 257 LAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMS-QKGF 335 (567)
Q Consensus 257 ~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~-~~~~ 335 (567)
.+..|+++++...+++..+++.++++++|++..+|..+..++......... ...++. ++ |+.+.++..+.+. .+++
T Consensus 213 ~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~~~l~~-~~-G~~~~~~~~~~~~~~~~~ 289 (540)
T PRK13388 213 AVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDA-DNPLRV-AF-GNEASPRDIAEFSRRFGC 289 (540)
T ss_pred HHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCcccc-ccceEE-EE-CCCCCHHHHHHHHHHhCC
Confidence 455677766666788999999999999999999999999998765432222 345553 33 5566777777776 4589
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceecccccee-----------EeeCCCCCccCCCCCceEE
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLD-----------VIDTRTQQPVPADGKTIGE 404 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-----------i~d~~~~~~~~~~~~~~Ge 404 (567)
++++.||+||++.++..... ...+++|.|++++ .+. ++|.+ |+.+..+ ++.||
T Consensus 290 ~l~~~YG~tE~~~~~~~~~~-------------~~~~~vG~p~~g~-~i~~~~~~~~~~~~~~d~~-g~~~~~~-~~~GE 353 (540)
T PRK13388 290 QVEDGYGSSEGAVIVVREPG-------------TPPGSIGRGAPGV-AIYNPETLTECAVARFDAH-GALLNAD-EAIGE 353 (540)
T ss_pred ceecccccccccceeecCCC-------------CCCCCCCCCCCCc-EEEcCCCCccccceeccCc-cccccCC-CcceE
Confidence 99999999999765543210 1236789999886 432 23322 4444222 26899
Q ss_pred EEEe-cccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEE
Q 008389 405 IVMS-GNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASV 483 (567)
Q Consensus 405 i~v~-~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 483 (567)
|+++ |++++.||+++++.+...|.+|||+|||+|+++++|.+++.||.+|+|+++|.+|+|.+||+++.++++|.+|+|
T Consensus 354 l~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v 433 (540)
T PRK13388 354 LVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAV 433 (540)
T ss_pred EEEecCCcccccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEE
Confidence 9998 999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHh--cCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 484 VARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRA--KMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~--~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
++.+++..|+.+++++++.++. ..+. .+++++++. .|+.+++|..+++++ ||+|++||++|++|++...+.
T Consensus 434 ~g~~~~~~g~~~~~~v~~~~~~-~~~~----~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 434 YAVPDERVGDQVMAALVLRDGA-TFDP----DAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred EEccCCCCCceeEEEEEECCCC-cCCH----HHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 9999988888899999887765 3444 466777765 499999999999877 999999999999999987555
No 70
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-65 Score=528.38 Aligned_cols=477 Identities=25% Similarity=0.386 Sum_probs=397.6
Q ss_pred hhhhhcCCCceeEEE--CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccC
Q 008389 27 DRAATVHPTRTSVVH--GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRL 104 (567)
Q Consensus 27 ~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~ 104 (567)
+.++..+||++|+.+ .++++||.||.+.+.++|..|.+.|+.+||+|+++++|++++++++|||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 456788999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCC
Q 008389 105 NAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDP 184 (567)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 184 (567)
+.+++.++++.++++++|+++..... ....+ .++++......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~-----------------~~~~~---------------------~~~~~~~~~~~ 123 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG-----------------RTDVE---------------------DLAAFIASADA 123 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc-----------------ccccc---------------------chhhhhhhccc
Confidence 99999999999999999997654220 00000 01111110000
Q ss_pred C-CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhh-cC
Q 008389 185 Q-FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAAL-CG 262 (567)
Q Consensus 185 ~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~-g~ 262 (567)
. .........+++++++|||||||.||+|.++|+++...+........+..+|++++.+|++|.+|+...+...+. |+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 124 LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 0 001122356789999999999999999999999998887777777778899999999999999998866655554 66
Q ss_pred eeEEeccCCHHHHHHHHH--hhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeec
Q 008389 263 TSICLRQVTAKAVYSAIA--KYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHT 340 (567)
Q Consensus 263 ~~~~~~~~~~~~~~~~i~--~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~ 340 (567)
++++...+++..++..+. ++++|+++++|++++.+.+........ ++++|.+++||++++....+.+.+.++++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~ 282 (488)
T PRK09088 204 SILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAA-LRHLTALFTGGAPHAAEDILGWLDDGIPMVDG 282 (488)
T ss_pred EEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccc-cccceEEEecCCCCCHHHHHHHHHhCCceeee
Confidence 665666788888888886 489999999999999998765433333 78999999999999999888887779999999
Q ss_pred cCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCC
Q 008389 341 YGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNP 420 (567)
Q Consensus 341 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~ 420 (567)
||+||++++........ ......+++|.|.+++ +++|+|++ +++++.+ +.|||+++|++++.||++++
T Consensus 283 YG~TE~~~~~~~~~~~~--------~~~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gY~~~~ 350 (488)
T PRK09088 283 FGMSEAGTVFGMSVDCD--------VIRAKAGAAGIPTPTV-QTRVVDDQ-GNDCPAG--VPGELLLRGPNLSPGYWRRP 350 (488)
T ss_pred ecccccccccccCCCcc--------cccccCCccccCCCCc-EEEEECCC-CCCCcCC--CceEEEEECCccchhhcCCh
Confidence 99999986543221100 0011336789999999 89999965 8888887 78999999999999999999
Q ss_pred ccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEE
Q 008389 421 KANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFV 499 (567)
Q Consensus 421 ~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v 499 (567)
+.+...| .+|||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||++|.+++.|.+++|++.+++..|+..++++
T Consensus 351 ~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v 430 (488)
T PRK09088 351 QATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAI 430 (488)
T ss_pred hhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEE
Confidence 8888777 489999999999999999999999999999999999999999999999999999999999887788888998
Q ss_pred EEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 500 TLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 500 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
++.++. ..+. .++.++++++++.+++|..+.+++ ||+|++||++|++|++++.+.
T Consensus 431 ~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 431 VPADGA-PLDL----ERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred EECCCC-CCCH----HHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 887654 3333 678999999999999999999888 999999999999999998765
No 71
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.1e-65 Score=593.48 Aligned_cols=518 Identities=22% Similarity=0.232 Sum_probs=405.8
Q ss_pred cCHHHHHhhhhhcCCCceeEEE---------CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 20 LTPLWFLDRAATVHPTRTSVVH---------GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~---------~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
.++.++|+++++++|+++|+++ .++++||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 5799999999999999999986 3578999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChHHHHHHHhccCceEEEEcccch---HHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 91 PMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF---KLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
+++|++++|++|.++.+++.++++.+++++++++.... ..+......... .......+ .+........
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~----- 386 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELE---LRTEIPAL-ALQDDGSLVG----- 386 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccc---cccccceE-Eecccccccc-----
Confidence 99999999999999999999999999999999876531 111111110000 00011111 1111100000
Q ss_pred cCCChHHHHHHHhcCC--CCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCc
Q 008389 168 LGRGAVEYEKFLQTGD--PQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPM 245 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~ 245 (567)
........+.+.... ..........++++++++|||||||.||||+++|+++.+.+.+....+++.++|+++...|+
T Consensus 387 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 465 (1389)
T TIGR03443 387 -GSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSGI 465 (1389)
T ss_pred -cccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 000000001110000 00111122456899999999999999999999999999998888888999999999999999
Q ss_pred cchhhhHHHHHHhhhcCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCC
Q 008389 246 FHCNGWCYTWSLAALCGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAP 322 (567)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l 322 (567)
+|..++...+.+++.|+++++... .++..+++.|+++++|++.++|++++.|..... .. ++++|.+++||+++
T Consensus 466 ~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~---~~-~~~lr~~~~gGe~l 541 (1389)
T TIGR03443 466 AHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT---TP-IPSLHHAFFVGDIL 541 (1389)
T ss_pred eecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc---cc-CCCccEEEEecccC
Confidence 999888888888889999887653 368899999999999999999999999875432 12 78999999999999
Q ss_pred CHHHHHHHHhc--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCC-CCccCCCC
Q 008389 323 PPSVLHAMSQK--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRT-QQPVPADG 399 (567)
Q Consensus 323 ~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~-~~~~~~~~ 399 (567)
++...+.+.+. ++++++.||+||++..++......................+|.|++++ .+.|+|++. +++++.|
T Consensus 542 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~G- 619 (1389)
T TIGR03443 542 TKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGVG- 619 (1389)
T ss_pred CHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCCC-
Confidence 99999888865 789999999999976655432211100000000011235689999999 899999753 5778888
Q ss_pred CceEEEEEecccccccccCCCccchhccc-----------------------------CCccccCceEEEeCCCcEEEec
Q 008389 400 KTIGEIVMSGNVVMKGYLKNPKANEETFA-----------------------------NGWYHTGDLGVKHPDNYIEIKD 450 (567)
Q Consensus 400 ~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-----------------------------~g~~~TGDl~~~~~~g~l~~~G 450 (567)
+.|||+|+|+.++.||+++++.+.+.|. ++||+|||+|++++||.++++|
T Consensus 620 -~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~G 698 (1389)
T TIGR03443 620 -EVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCG 698 (1389)
T ss_pred -CceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEec
Confidence 8899999999999999999999988872 5799999999999999999999
Q ss_pred cccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchh---------------------
Q 008389 451 RSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSN--------------------- 509 (567)
Q Consensus 451 R~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~--------------------- 509 (567)
|.||+||++|++|+|.|||.+|.++|.|.+++|++.+++..+..+++++++..+.....
T Consensus 699 R~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1389)
T TIGR03443 699 RADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIK 778 (1389)
T ss_pred ccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhh
Confidence 99999999999999999999999999999999998888777788999998763211100
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHH
Q 008389 510 EQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRA 554 (567)
Q Consensus 510 ~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (567)
......+++++++++||.|++|..+++++ ||+|++||++|++|++
T Consensus 779 ~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 779 YRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred hhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 11234688999999999999999999888 9999999999999964
No 72
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-64 Score=533.90 Aligned_cols=514 Identities=27% Similarity=0.378 Sum_probs=413.3
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
+++.++|.+.+.++|+++|+++.++.+||+||++++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCC--Cccc--------------
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESC--DPKD-------------- 163 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~-------------- 163 (567)
++|.++.+++.++++.++++++++++.....+....... ....++....... ....
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT--------KIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLV 175 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh--------ccceeEEeccccccccccccccchhhccccccc
Confidence 999999999999999999999999887655443321111 1122221110000 0000
Q ss_pred chhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH-hccC-CCcEEEE
Q 008389 164 LKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI-WGMN-EGAVYLW 241 (567)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~~~-~~d~~~~ 241 (567)
...........++.+........ .......+++++++|||||||.||+|.++|+++..+....... ++.. .++++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 176 VKVSESETIHLWNSVEKEVNTGV-EVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred ccccccchhhhhhhhhhcccccc-ccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 00000000011222211111110 1111235789999999999999999999999987654433332 3443 3457889
Q ss_pred ecCccchhhhHHHH-HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCC
Q 008389 242 TLPMFHCNGWCYTW-SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGA 320 (567)
Q Consensus 242 ~~p~~~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~ 320 (567)
.+|++|.+|+...+ ..+..|++++..+.+++..+++.|+++++|++.++|+++..+++........ ++++|.+++||+
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~v~~gg~ 333 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYD-ISSIRACISGSA 333 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCC-hhhhhheeeCCC
Confidence 99999999886544 4556677777777789999999999999999999999999998865544444 789999999999
Q ss_pred CCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCC
Q 008389 321 APPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADG 399 (567)
Q Consensus 321 ~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~ 399 (567)
++++++.+++.+ +++++++.||+||++.+....... .....+.+|.|.+++ .++++|++++.+++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g- 401 (563)
T PRK06710 334 PLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG- 401 (563)
T ss_pred cCCHHHHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC-
Confidence 999999999885 488999999999997654332110 011235789999999 7999998889999988
Q ss_pred CceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCce
Q 008389 400 KTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVL 479 (567)
Q Consensus 400 ~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~ 479 (567)
+.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.+++.||.+|+|+++|.+|+|.+||+.+.+++.|.
T Consensus 402 -~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~ 480 (563)
T PRK06710 402 -EIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQ 480 (563)
T ss_pred -CceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCccee
Confidence 7899999999999999999999988899999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 480 EASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 480 ~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
+++|++.++...|+.++++++..++. ..+. ++++++++++++.++.|..+.+++ +|+|++||++|+.|++++..
T Consensus 481 ~~~v~~~~~~~~g~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 481 EVVTIGVPDPYRGETVKAFVVLKEGT-ECSE----EELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred eEEEEccccCCcCceeEEEEEECCCC-CCCH----HHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhh
Confidence 99999999988889999999988765 3344 678889999999999999999888 99999999999999999877
Q ss_pred cCC
Q 008389 559 MGP 561 (567)
Q Consensus 559 ~~~ 561 (567)
...
T Consensus 556 ~~~ 558 (563)
T PRK06710 556 KNE 558 (563)
T ss_pred cCc
Confidence 643
No 73
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.8e-65 Score=551.06 Aligned_cols=495 Identities=17% Similarity=0.223 Sum_probs=391.7
Q ss_pred cccCHHHHHhhhhhcCCC-ceeEEECC-ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 18 MALTPLWFLDRAATVHPT-RTSVVHGS-TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~-~~a~~~~~-~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
+..|+.++|++.++++|+ ++|+.+.+ +++||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 568999999999999998 68887643 7899999999999999999887 69999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchHHHH--HHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAE--EALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAV 173 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (567)
+++|+++.++.+++.++++.++++++|++.+..+... .....+ .....+.+.+... .. . ......
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~-~~--~--~~~~~~ 347 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQL--------TQVRWVYLEDLKD-DV--T--TADKLW 347 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhh--------ccccEEEhhhhhh-hc--c--hhHHHH
Confidence 9999999999999999999999999999877543211 000000 1112222221100 00 0 000000
Q ss_pred HHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH
Q 008389 174 EYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY 253 (567)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~ 253 (567)
...+.. .+. ....+..++++++++|||||||.||+|.+||+++.+........++++++|++++.+|++|.+|+..
T Consensus 348 ~~~~~~---~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~ 423 (718)
T PRK08043 348 IFAHLL---MPR-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTV 423 (718)
T ss_pred HHHHHh---CCc-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHH
Confidence 000100 010 1112345689999999999999999999999999988888777888999999999999999999865
Q ss_pred H-HHHhhhcCeeEEecc-CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHH
Q 008389 254 T-WSLAALCGTSICLRQ-VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMS 331 (567)
Q Consensus 254 ~-~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~ 331 (567)
. +..+..|+++++.+. +++..+++.++++++|++.++|+++..+.+... ..+ ++++|.+++||+++++++.+.+.
T Consensus 424 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~--~~~-~~~lr~i~~gg~~l~~~~~~~~~ 500 (718)
T PRK08043 424 GLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFAN--PYD-FARLRYVVAGAEKLQESTKQLWQ 500 (718)
T ss_pred HHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcC--ccc-ccceEEEEEeCccCCHHHHHHHH
Confidence 4 455566777776653 567888999999999999999999988866422 223 78999999999999999999988
Q ss_pred h-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecc
Q 008389 332 Q-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGN 410 (567)
Q Consensus 332 ~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~ 410 (567)
+ +++++++.||+||+++.++..... ....+++|.|+|++ +++|+|.+ +. + +.|||+++|+
T Consensus 501 ~~~g~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~~~i~d~~-~~----~--~~Gel~v~g~ 561 (718)
T PRK08043 501 DKFGLRILEGYGVTECAPVVSINVPM-----------AAKPGTVGRILPGM-DARLLSVP-GI----E--QGGRLQLKGP 561 (718)
T ss_pred HHcCCCeecccCcccccceEEecCCc-----------ccCCCCCCCcCCCC-eeEEecCC-CC----C--CceEEEEecC
Confidence 4 599999999999997665432110 12347899999999 89999865 32 2 4599999999
Q ss_pred cccccccCC--Ccc-------chh-cccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCcee
Q 008389 411 VVMKGYLKN--PKA-------NEE-TFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLE 480 (567)
Q Consensus 411 ~~~~gy~~~--~~~-------~~~-~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~ 480 (567)
+++.||+++ ++. +.. .+.+|||+|||+|++|+||++++.||.+|+|+++|++|+|.+||+++.+++.+.+
T Consensus 562 ~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~ 641 (718)
T PRK08043 562 NIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQ 641 (718)
T ss_pred CccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccce
Confidence 999999983 332 111 2357999999999999999999999999999999999999999999999998888
Q ss_pred eEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc-CCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 481 ASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK-MPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 481 ~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
++|++.++...|+.++++++ +. ..+. ++++++++++ |+.|++|..+.+++ +|+|++||++|++|++++.+
T Consensus 642 ~avv~~~~~~~ge~~v~~~~---~~-~~~~----~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 642 HATAIKSDASKGEALVLFTT---DS-ELTR----EKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred EEEEEccCCCCCceEEEEEc---Cc-ccCH----HHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 88899888888888887764 21 2333 5788899887 99999999999988 99999999999999999877
Q ss_pred cC
Q 008389 559 MG 560 (567)
Q Consensus 559 ~~ 560 (567)
..
T Consensus 714 ~~ 715 (718)
T PRK08043 714 PE 715 (718)
T ss_pred cc
Confidence 53
No 74
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-64 Score=533.37 Aligned_cols=518 Identities=26% Similarity=0.339 Sum_probs=413.8
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
..++.++|+++++.+|+++|+.+.++++||.||++++.++|..|.+.|+++|++|+++++|+++++++++||+++|++++
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 111 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHV 111 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEe
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccc--hh--------cc
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDL--KY--------AL 168 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~--------~~ 168 (567)
|++|..+.+++.++++.++++++++++...+.+.+..... ....++............ .. ..
T Consensus 112 ~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (567)
T PRK06178 112 PVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--------SLRHVIVTSLADVLPAEPTLPLPDSLRAPRLA 183 (567)
T ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--------CcceEEEecccccccccccccccccccccccc
Confidence 9999999999999999999999999988776655443211 122333322111000000 00 00
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHH-HhccCCCcEEEEecCccc
Q 008389 169 GRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVAL-IWGMNEGAVYLWTLPMFH 247 (567)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~d~~~~~~p~~~ 247 (567)
......+.+..... +......+...+++++++|||||||.||+|.+||.++......... ...++.+|+++..+|++|
T Consensus 184 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 262 (567)
T PRK06178 184 AAGAIDLLPALRAC-TAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFW 262 (567)
T ss_pred ccccccHHHHhhcc-ccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHH
Confidence 01111111111111 1111122345789999999999999999999999998876655443 356788999999999999
Q ss_pred hhhhHH-HHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhh--ccCCCCCH
Q 008389 248 CNGWCY-TWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVN--TAGAAPPP 324 (567)
Q Consensus 248 ~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~--~~G~~l~~ 324 (567)
++|+.. .+..+..|+++++..++++..++..++++++|.+.++|..+..+.......... +++++.+. ..++.+++
T Consensus 263 ~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~-l~~l~~~~~~~~~~~~~~ 341 (567)
T PRK06178 263 IAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYD-LSSLRQVRVVSFVKKLNP 341 (567)
T ss_pred HHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCC-cchheeeeeccccccCCH
Confidence 999864 455567788888888889999999999999999999999999988765433333 66777653 34589999
Q ss_pred HHHHHHHhc-CCeeee-ccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCce
Q 008389 325 SVLHAMSQK-GFHVTH-TYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTI 402 (567)
Q Consensus 325 ~~~~~~~~~-~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~ 402 (567)
+..+.+++. +..++. .||+||+++.+.......... .........+|.|+|++ .++|+|++++.+++.+ +.
T Consensus 342 ~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~----~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~ 414 (567)
T PRK06178 342 DYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDD----FDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AE 414 (567)
T ss_pred HHHHHHHHHhCCcccccccccccccccceeccccccCc----cccccCCcccccccCCc-EEEEEcCCCCCcCCCC--Cc
Confidence 999998854 666664 799999876554432111000 00012345689999999 8999997779999988 78
Q ss_pred EEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeE
Q 008389 403 GEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEAS 482 (567)
Q Consensus 403 Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~ 482 (567)
|||+++|++++.||+++++.+...|.+|||+|||+|+++++|++++.||.+|+|+.+|.+++|.+||+++.++++|.+++
T Consensus 415 Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~ 494 (567)
T PRK06178 415 GEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSA 494 (567)
T ss_pred eEEEEECCcccccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEE
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 483 VVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 483 v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
+++.++...|+.+++++++.++. ..+. ++++++++++++.+++|. +.+++ +|+|++||++|++|++++.+.
T Consensus 495 v~~~~~~~~g~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 495 VVGRPDPDKGQVPVAFVQLKPGA-DLTA----AALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred EEcCcCcccCcceEEEEEeCCCC-cCCH----HHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 99998888788999999887654 3344 678899999999999997 66666 999999999999999998764
No 75
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-64 Score=538.43 Aligned_cols=507 Identities=22% Similarity=0.274 Sum_probs=396.6
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
+.++.|+.++|.+.++++|+++|+++.++++||+||++++.++|..|.+.|+++||+|+++++|+.++++++|||+++|+
T Consensus 33 ~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~ 112 (600)
T PRK08279 33 PDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGA 112 (600)
T ss_pred CCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 35568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEY 175 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
+++++++.++.+++.++++.++++++|++.+..+.+.+...... . ...+.+.+..... .......+
T Consensus 113 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~------~~~~~~~~ 178 (600)
T PRK08279 113 VVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLA-------R-PPRLWVAGGDTLD------DPEGYEDL 178 (600)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhc-------c-cceEEEecCcccc------ccccHHHH
Confidence 99999999999999999999999999999887666655433222 1 2222222211000 01112222
Q ss_pred HHHHhcCCCC-CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHH
Q 008389 176 EKFLQTGDPQ-FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYT 254 (567)
Q Consensus 176 ~~~l~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (567)
.+........ .........+++++++|||||||.||+|.+||+++.+++......++++++|++++.+|++|.+|+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~ 258 (600)
T PRK08279 179 AAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVA 258 (600)
T ss_pred hhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHH
Confidence 2222211111 111123456899999999999999999999999999999888888999999999999999999999877
Q ss_pred HHHhhhcCeeE-EeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc
Q 008389 255 WSLAALCGTSI-CLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK 333 (567)
Q Consensus 255 ~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~ 333 (567)
+...+.+|+.+ +...+++..+++.++++++|++..+|++++.++......... ..++|. ++|+.+++++.+.+.+.
T Consensus 259 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~-~~~l~~--~~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 259 WSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDR-DHRLRL--MIGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCcccc-CcceeE--EecCCCCHHHHHHHHHH
Confidence 77666555444 456789999999999999999999999999998765433322 456664 45788999999998854
Q ss_pred -CC-eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceec----ccccee---------EeeCCCCC--ccC
Q 008389 334 -GF-HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFI----GLEKLD---------VIDTRTQQ--PVP 396 (567)
Q Consensus 334 -~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~~~---------i~d~~~~~--~~~ 396 (567)
+. .+++.||+||++....... ....++|.+.+ +. .+. +.+.+ +. .++
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~~~--------------~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~i~~~~-~~~~~~~ 399 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFINVF--------------NFDGTVGRVPLWLAHPY-AIVKYDVDTGEPVRDAD-GRCIKVK 399 (600)
T ss_pred hCcceeeeeecccccceeecccC--------------CCCcccccccccccccc-eeeeeccCcCceeeCCC-CccccCC
Confidence 54 6999999999864322110 01133444333 22 122 22222 22 345
Q ss_pred CCCCceEEEE--EecccccccccCCCccchhcc-------cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHH
Q 008389 397 ADGKTIGEIV--MSGNVVMKGYLKNPKANEETF-------ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVE 467 (567)
Q Consensus 397 ~~~~~~Gei~--v~~~~~~~gy~~~~~~~~~~~-------~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~ 467 (567)
.+ +.||++ +.++.++.|| +++..+...| .++||+|||+|++++||.+++.||.+|+||++|++|+|.+
T Consensus 400 ~g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~e 476 (600)
T PRK08279 400 PG--EVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTE 476 (600)
T ss_pred CC--CceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHH
Confidence 55 789998 6789999999 8887776655 2579999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeeEEEEeecCCC-CCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCc
Q 008389 468 VENMMYLHPAVLEASVVARADERW-GESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATG 545 (567)
Q Consensus 468 iE~~l~~~~~i~~~~v~~~~~~~~-g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~G 545 (567)
||+.+.++|+|.+++|++++.+.. +...+++++..++. ..+. ++++++++++|+.|++|..+++++ +|+|++|
T Consensus 477 IE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~-~~~~----~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~G 551 (600)
T PRK08279 477 VENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGA-EFDL----AALAAHLYERLPAYAVPLFVRLVPELETTGTF 551 (600)
T ss_pred HHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCc-cCCH----HHHHHHHHhhCccccCCeEEEeecCCCCCcch
Confidence 999999999999999999986653 44566666666533 3344 688999999999999999999888 9999999
Q ss_pred cccHHHHHHHHHHcCCcc
Q 008389 546 KIQKHVLRAKAKEMGPVR 563 (567)
Q Consensus 546 Ki~r~~l~~~~~~~~~~~ 563 (567)
|++|+.|++++.+....+
T Consensus 552 Ki~r~~L~~~~~~~~~~~ 569 (600)
T PRK08279 552 KYRKVDLRKEGFDPSKVD 569 (600)
T ss_pred hhhHHHHhhcCCCccccC
Confidence 999999999988875443
No 76
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.4e-64 Score=528.99 Aligned_cols=490 Identities=22% Similarity=0.297 Sum_probs=409.1
Q ss_pred CHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeec
Q 008389 21 TPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 21 t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i 100 (567)
++.+.|.+.+..+|+++|+...++++||+||.+++.++|..|.+.|+++||+|+++++|+.++++++|||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHh
Q 008389 101 NIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQ 180 (567)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (567)
++.++.+++.++++..+++.++++.+...... . ..++.+.. .+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~--------------~-~~~~~~~~------------------~~~~~~ 127 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV--------------G-TQIITLSA------------------LEQAET 127 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc--------------C-CceEEchH------------------hhhhhh
Confidence 99999999999999999999999876532211 0 11222111 111111
Q ss_pred cCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhh
Q 008389 181 TGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAAL 260 (567)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 260 (567)
...+ .....+..+++.++++|||||||.||+|.++|+++..........+++..+++++...|++|..++...+.++..
T Consensus 128 ~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~ 206 (502)
T TIGR01734 128 SGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLAS 206 (502)
T ss_pred hcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHC
Confidence 1111 111223456889999999999999999999999999988888888889999999999999999999888888889
Q ss_pred cCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--CC
Q 008389 261 CGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--GF 335 (567)
Q Consensus 261 g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~~ 335 (567)
|+++++.+. .++..+++.+++++++.+.++|++++.++......... +++++.++++|++++++..+++.+. ++
T Consensus 207 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~-~~~l~~~~~~G~~~~~~~~~~~~~~~~~~ 285 (502)
T TIGR01734 207 GGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQEN-YPHLTHFLFCGEELPVKTAKALLERFPKA 285 (502)
T ss_pred CCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccccccc-CCcccEEEEcCCcCCHHHHHHHHHHCCCc
Confidence 999988754 57899999999999999999999998877654333333 7899999999999999999998854 78
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKG 415 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~g 415 (567)
++++.||+||+++.++......+. ........+|.+.+++ .++|+|++ +.+++.+ +.|||+++|+.++.|
T Consensus 286 ~~~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~vg~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~g~~~~~g 355 (502)
T TIGR01734 286 TIYNTYGPTEATVAVTSVKITQEI------LDQYPRLPIGFAKPDM-NLFIMDEE-GEPLPEG--EKGEIVIVGPSVSKG 355 (502)
T ss_pred EEEeCccCCcceEEEEEEEccccc------cccCCccccccccCCC-EEEEECCC-CCCCCCC--CeeEEEEcccccccc
Confidence 999999999987654433221110 0111235689999999 89999987 8888887 889999999999999
Q ss_pred ccCCCccchhccc----CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEee-cCC
Q 008389 416 YLKNPKANEETFA----NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARA-DER 490 (567)
Q Consensus 416 y~~~~~~~~~~~~----~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~-~~~ 490 (567)
|+++++.+...|. .+||+|||+|+++++ ++++.||.+|+|+.+|++|+|.+||+.+.++|.|.++++++.. ...
T Consensus 356 y~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~ 434 (502)
T TIGR01734 356 YLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDH 434 (502)
T ss_pred ccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCC
Confidence 9999998877662 359999999999966 9999999999999999999999999999999999999999865 444
Q ss_pred CCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHH
Q 008389 491 WGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAK 557 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (567)
.++.++++++..... ..+..++.+++++.++++++.+..|+.+++++ +|+|++||++|++|++++.
T Consensus 435 ~~~~~~~~v~~~~~~-~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 435 KVEYLIAAIVPETED-FEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred CceEEEEEEEecccc-cccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 567888999877654 33334455789999999999999999999988 9999999999999999764
No 77
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-64 Score=528.03 Aligned_cols=478 Identities=24% Similarity=0.335 Sum_probs=399.5
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
.++++.+.|.+++..+|+++|+.+.++.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+|+++.++.+++.++++.++++.++++++..+.+... ...++.++.... ...
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-------------~~~~~~~~~~~~--------------~~~- 164 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGA-------------DDAVAVIDPATA--------------GAE- 164 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhh-------------hcceEEeccchh--------------hhh-
Confidence 9999999999999999999999999988765443321 112222221100 000
Q ss_pred HHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHH--HHHHHHHHHhccCCCcEEEEecCccchhhhHHHH
Q 008389 178 FLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAY--LMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW 255 (567)
Q Consensus 178 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~--~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 255 (567)
... ..+...++.++++|||||||.||+|.++|.... .........+++..+|+++..+|++|.+|+...+
T Consensus 165 ----~~~----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~ 236 (516)
T PRK13383 165 ----ESG----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLM 236 (516)
T ss_pred ----cCC----CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHH
Confidence 000 011223456789999999999999999997432 1122233456788999999999999999998888
Q ss_pred HHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCC-cCCCCchhhhhccCCCCCHHHHHHHHh-c
Q 008389 256 SLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDT-ILPLPHVVHVNTAGAAPPPSVLHAMSQ-K 333 (567)
Q Consensus 256 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~~~l~~lr~i~~~G~~l~~~~~~~~~~-~ 333 (567)
.++..|++++....+++..+++.++++++|.+.++|+++..+.+...... ...++++|.+++||+++++++++++.+ +
T Consensus 237 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 316 (516)
T PRK13383 237 LTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY 316 (516)
T ss_pred HHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc
Confidence 88888998888778899999999999999999999999999987543211 122788999999999999999999885 5
Q ss_pred CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccc
Q 008389 334 GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVM 413 (567)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~ 413 (567)
+.++++.||+||++..+..+... ......++|.|++++ .++|+|++ +++++.+ +.|||+++|+.++
T Consensus 317 g~~v~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~~ 382 (516)
T PRK13383 317 GDILYNGYGSTEVGIGALATPAD----------LRDAPETVGKPVAGC-PVRILDRN-NRPVGPR--VTGRIFVGGELAG 382 (516)
T ss_pred Cchhhhcccccccccceeccccc----------cccCCCcccCCCCCc-EEEEECCC-CCCCCCC--CceEEEEecCccc
Confidence 88999999999997654432210 112246799999999 89999976 8888887 7899999999999
Q ss_pred ccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCC
Q 008389 414 KGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGE 493 (567)
Q Consensus 414 ~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~ 493 (567)
.||++.+. ..+.+|||+|||+|+++++|++++.||.+|+|+.+|.+|+|.+||..|.+++.|.++++++.++...|+
T Consensus 383 ~~Y~~~~~---~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~ 459 (516)
T PRK13383 383 TRYTDGGG---KAVVDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGH 459 (516)
T ss_pred ccccCCch---hheecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCc
Confidence 99998754 335689999999999999999999999999999999999999999999999999999999999888889
Q ss_pred cceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 494 SPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
.+.++|++.++. ..+. .+++++++++++.+..|..+.+++ ||+|++||++|+.|+
T Consensus 460 ~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 460 RLAAFVVLHPGS-GVDA----AQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred eEEEEEEECCCC-CCCH----HHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 999999987654 3344 678899999999999999999888 999999999999874
No 78
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=3.3e-64 Score=532.51 Aligned_cols=508 Identities=25% Similarity=0.327 Sum_probs=409.9
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHH-HccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALC-KRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~-~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
..++.++|.+++.++|+++|+++.++++||+||.+++.++|+.|. +.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 358999999999999999999999999999999999999999997 6899999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCC-C-c-------------c
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESC-D-P-------------K 162 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~-------------~ 162 (567)
+|++|.++.+++.++++.++++++++++.....+.+..... ....++....... . . .
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--------PVKQVITTGLGDMLGFPKAALVNFVVKYVKK 175 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--------CccEEEEechhhhcccccchhhhhhhhhhhc
Confidence 99999999999999999999999999887765544432211 1222322210000 0 0 0
Q ss_pred cchhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc----cCCC-c
Q 008389 163 DLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG----MNEG-A 237 (567)
Q Consensus 163 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~~~~-d 237 (567)
............+.+.+...............+++++++|||||||.||+|.++|.++..........++ +..+ +
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08751 176 LVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCE 255 (560)
T ss_pred cccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCc
Confidence 0000001122334444443322222223346689999999999999999999999999887776655543 3344 5
Q ss_pred EEEEecCccchhhhHHH-HHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhh
Q 008389 238 VYLWTLPMFHCNGWCYT-WSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHV 315 (567)
Q Consensus 238 ~~~~~~p~~~~~g~~~~-~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i 315 (567)
+++...|++|.+++... +.....|++.++. ...++..+++.++++++|++.++|.++..+.+........ ++++|.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-l~~lr~v 334 (560)
T PRK08751 256 VVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQID-FSSLKMT 334 (560)
T ss_pred eEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcc-hhhheee
Confidence 67788999999998643 4445567776665 3568999999999999999999999999999876544444 7899999
Q ss_pred hccCCCCCHHHHHHHHhc-CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCc
Q 008389 316 NTAGAAPPPSVLHAMSQK-GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQP 394 (567)
Q Consensus 316 ~~~G~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (567)
++||+++++.+.+.+.+. ++++++.||+||+++.++.+.... ....+.+|.|++++ .++++|++ +.+
T Consensus 335 ~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~~~~~~-~v~i~d~~-~~~ 402 (560)
T PRK08751 335 LGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL----------KEYNGSIGLPIPST-DACIKDDA-GTV 402 (560)
T ss_pred eeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc----------cccCCCcCccCCCc-eEEEECCC-CCC
Confidence 999999999999998864 889999999999987655432211 11236789999999 89999965 888
Q ss_pred cCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHh
Q 008389 395 VPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMY 473 (567)
Q Consensus 395 ~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 473 (567)
++.+ +.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.+.
T Consensus 403 ~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~ 480 (560)
T PRK08751 403 LAIG--EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA 480 (560)
T ss_pred CCCC--CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH
Confidence 8887 789999999999999999999888777 4799999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHH
Q 008389 474 LHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVL 552 (567)
Q Consensus 474 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l 552 (567)
++++|.+++|++.++...|+.+.++++.... ..+. ++++++++++++.++.|..+.+++ ||+|++||++|++|
T Consensus 481 ~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~--~~~~----~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L 554 (560)
T PRK08751 481 MMPGVLEVAAVGVPDEKSGEIVKVVIVKKDP--ALTA----EDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRREL 554 (560)
T ss_pred hCcCeeeeEEEecCCCCCCceEEEEEEcCCC--CCCH----HHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHH
Confidence 9999999999999988778877777765432 3333 678889999999999999999888 99999999999999
Q ss_pred HHH
Q 008389 553 RAK 555 (567)
Q Consensus 553 ~~~ 555 (567)
++.
T Consensus 555 ~~~ 557 (560)
T PRK08751 555 RDA 557 (560)
T ss_pred HHh
Confidence 876
No 79
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-65 Score=507.47 Aligned_cols=519 Identities=23% Similarity=0.251 Sum_probs=424.2
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECC--------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHh
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGS--------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFG 89 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 89 (567)
..+|+++.|++.+..+++.+++.... +++||+|..+++.+++..|+++|+++++.|+|+..|++||+++.+|
T Consensus 73 ~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a 152 (691)
T KOG1256|consen 73 GPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMA 152 (691)
T ss_pred CcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHH
Confidence 36899999999999999999998743 7899999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChHHHHHHHhccCceEEEEc-ccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhcc
Q 008389 90 VPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVD-QEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYAL 168 (567)
Q Consensus 90 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (567)
|...|+++|||..+++++.+.++++.+.+.++|++ ++....+.+..... ..+.++.+|.+++............
T Consensus 153 ~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~-----~~~~LK~iI~~~~~~~~~~~~~~~~ 227 (691)
T KOG1256|consen 153 CYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND-----SLPSLKAIIQLDEPSDELKEKAENN 227 (691)
T ss_pred HHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc-----cCccceeEEEecCCchhhhhhhhcC
Confidence 99999999999999999999999999999999999 44545444433221 1126788888887755444444445
Q ss_pred CCChHHHHHHHhcCCCCCCCC-CCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---h---ccCCCcEEEE
Q 008389 169 GRGAVEYEKFLQTGDPQFDWK-PPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---W---GMNEGAVYLW 241 (567)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~---~~~~~d~~~~ 241 (567)
+....+|++++..+....... .+..++|.|.|.|||||||.||||.+||+|+.+........ . .....|++++
T Consensus 228 gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lS 307 (691)
T KOG1256|consen 228 GVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLS 307 (691)
T ss_pred CeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEE
Confidence 566899999999986554444 47889999999999999999999999999999865542221 1 1233699999
Q ss_pred ecCccchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC----C-------------
Q 008389 242 TLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE----D------------- 304 (567)
Q Consensus 242 ~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~------------- 304 (567)
.+|+.|++...........|+++.+.. .|+..+.+.|++.+||++.++|..|+++.+...+ .
T Consensus 308 yLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~ 386 (691)
T KOG1256|consen 308 YLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMA 386 (691)
T ss_pred eCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 999999999998888888888877775 6888999999999999999999999887632100 0
Q ss_pred ------------C-cC--------------CCCchhhhhccCCCCCHHHHHHHHhc-CCeeeeccCCccCcCCcccccCC
Q 008389 305 ------------T-IL--------------PLPHVVHVNTAGAAPPPSVLHAMSQK-GFHVTHTYGLSETYGPSTVCAWK 356 (567)
Q Consensus 305 ------------~-~~--------------~l~~lr~i~~~G~~l~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~ 356 (567)
. .. -...+|.+++|++|+++++...++.. +|+++++||+||+.+.++.....
T Consensus 387 ~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~~ 466 (691)
T KOG1256|consen 387 YKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLPG 466 (691)
T ss_pred HHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccCC
Confidence 0 00 03467888999999999999999965 79999999999998555544322
Q ss_pred CCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccC
Q 008389 357 PEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTG 435 (567)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TG 435 (567)
+ ...+++|.|+|++ +++++|...-...+.+ ..|||+|+|++++.||+++|+.|.+.| .|||++||
T Consensus 467 d-----------~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTG 532 (691)
T KOG1256|consen 467 D-----------NVLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTG 532 (691)
T ss_pred C-----------CCCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhccccccccc
Confidence 1 1458999999999 8999998767777777 469999999999999999999999999 79999999
Q ss_pred ceEEEeCCCcEEEeccccceee-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhh----
Q 008389 436 DLGVKHPDNYIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNE---- 510 (567)
Q Consensus 436 Dl~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~---- 510 (567)
|+|+++++|.+.+.||.+++|| ..|+.|.|..||++..+.+.|.+++|.+..... .++++|+++++......
T Consensus 533 DiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~---~LvaiVvpd~e~~~~~a~~~~ 609 (691)
T KOG1256|consen 533 DIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRS---FLVAIVVPDPEVLKSWAAKDG 609 (691)
T ss_pred cceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchh---cEEEEEecChhhchhhHHHcc
Confidence 9999999999999999999999 899999999999999999999999998877543 49999999775422111
Q ss_pred ---------------HHHHHHHHHHHH-hcCCCCCCCceeecCccc-------CCCCccccHHHHHHHHHHc
Q 008389 511 ---------------QQLAEDIMKFCR-AKMPAYWVPKSIVFGPLP-------KTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 511 ---------------~~~~~~l~~~l~-~~l~~~~~p~~i~~~~lP-------~t~~GKi~r~~l~~~~~~~ 559 (567)
+....++.+.-+ +.+..+.....+.+.+.| .||+-|++|..|.+.|++.
T Consensus 610 ~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~ 681 (691)
T KOG1256|consen 610 VKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQ 681 (691)
T ss_pred CchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHH
Confidence 123334444433 347777777877765422 6889999999999999875
No 80
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-65 Score=511.01 Aligned_cols=512 Identities=26% Similarity=0.342 Sum_probs=420.5
Q ss_pred HHHhhhhhc-CCCceeEEECC------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 24 WFLDRAATV-HPTRTSVVHGS------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 24 ~~l~~~a~~-~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.++++.... .++.+++++.+ ..+||.|+.+.+.++|+.|.+.|+++||+|++++|+.+++++++|||.++|++
T Consensus 68 n~~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai 147 (626)
T KOG1175|consen 68 NCLDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAI 147 (626)
T ss_pred hhhhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeE
Confidence 344444333 48899998853 44899999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchH---------HHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK---------LAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
.+++...+++.++...++.++++++++.+.... ...++...+.... + .....+.+...
T Consensus 148 ~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~--~-~~~~~~~~~~~---------- 214 (626)
T KOG1175|consen 148 HSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKS--R-PVWLDLIVSRR---------- 214 (626)
T ss_pred EEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccc--c-ccceeeEEecc----------
Confidence 999999999999999999999999999774432 2222222211100 0 00111111111
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHH-HHHHHHHHHhccCCCcEEEEecCcc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAY-LMSLSVALIWGMNEGAVYLWTLPMF 246 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~-~~~~~~~~~~~~~~~d~~~~~~p~~ 246 (567)
.....++.++....+... ..+.+.+|+.+|+|||||||.||++.+++.... ..+......++++++|++++.....
T Consensus 215 --~~d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~G 291 (626)
T KOG1175|consen 215 --NRDLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLG 291 (626)
T ss_pred --cccccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccC
Confidence 113456666555544433 345788999999999999999999999988654 4444455668999999999999999
Q ss_pred chhhhHHHHH-HhhhcCeeEEec--cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcC-CCCchhhhhccCCCC
Q 008389 247 HCNGWCYTWS-LAALCGTSICLR--QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTIL-PLPHVVHVNTAGAAP 322 (567)
Q Consensus 247 ~~~g~~~~~~-~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~l~~lr~i~~~G~~l 322 (567)
|+.|..+.+. .++.|++.+++. ++++..+++.+.++++|.+++.|+.++.|.+........ .+++||.+.++||++
T Consensus 292 Wi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi 371 (626)
T KOG1175|consen 292 WITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPI 371 (626)
T ss_pred eeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccC
Confidence 9999887666 556677777763 458999999999999999999999999888765554332 147799999999999
Q ss_pred CHHHHHHHHhc-CC-eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCC
Q 008389 323 PPSVLHAMSQK-GF-HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGK 400 (567)
Q Consensus 323 ~~~~~~~~~~~-~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~ 400 (567)
.++..+++.+. +. +|.+.||+||+|+.+..+..... ...++..+.|.++. .+.|.|++ |..++.++
T Consensus 372 ~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de~-g~~~~~~~- 439 (626)
T KOG1175|consen 372 NPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDEN-GNELPPST- 439 (626)
T ss_pred CcchHHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECCC-CCCcCCCC-
Confidence 99999999954 66 69999999999999888765431 34568999999999 89999995 99998876
Q ss_pred ceEEEEEecc---cccccccCCCccch-hccc--CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhc
Q 008389 401 TIGEIVMSGN---VVMKGYLKNPKANE-ETFA--NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYL 474 (567)
Q Consensus 401 ~~Gei~v~~~---~~~~gy~~~~~~~~-~~~~--~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 474 (567)
+.|+|+++.+ ..+++||++.+... .-|. .|+|.|||.+++|+||++++.||.||+|+++|.++++.|||+++.+
T Consensus 440 ~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~ 519 (626)
T KOG1175|consen 440 GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVE 519 (626)
T ss_pred ceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhh
Confidence 7899999975 67899999988443 3344 8999999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 475 HPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 475 ~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
||.|.|++|++.+++..|+.+.+||+++++ ..+.+++.++|+..+++.+.+++.|+.|.+++ ||+|.+||+.|+.||
T Consensus 520 hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g--~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lr 597 (626)
T KOG1175|consen 520 HPAVAESAVVGSPDPIKGEVVLAFVVLKSG--SHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALR 597 (626)
T ss_pred CcchhheeeecCCCCCCCeEEEEEEEEcCC--CCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHH
Confidence 999999999999999999999999999999 55667889999999999999999999999998 999999999999999
Q ss_pred HHHHHcCCcccc
Q 008389 554 AKAKEMGPVRKS 565 (567)
Q Consensus 554 ~~~~~~~~~~~~ 565 (567)
++....+.-+.+
T Consensus 598 ki~~g~~~~d~s 609 (626)
T KOG1175|consen 598 KIASGKAVGDTS 609 (626)
T ss_pred HHhccCcccccc
Confidence 998877544443
No 81
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5.3e-65 Score=532.96 Aligned_cols=489 Identities=20% Similarity=0.221 Sum_probs=374.4
Q ss_pred cC-HHHHHhhhhhcCCCceeEEECC----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 20 LT-PLWFLDRAATVHPTRTSVVHGS----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 20 ~t-~~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
|+ +.+.|++++.++|+++|+++.+ +++||+||.++++++|+.|.+. ++||+|+++++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 34 7889999999999999999987 7899999999999999999987 799999999999999999999999999
Q ss_pred Ceeeeccc-------cCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 95 AVLNAVNI-------RLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 95 ~~~v~i~~-------~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
+++++++. ....+++.++++.++++++|++....+.+.... . . +.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-----------~--~-~~~~~~---------- 134 (525)
T PRK05851 79 AAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVD-----------S--S-VTVHDL---------- 134 (525)
T ss_pred CCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhh-----------c--c-cccccc----------
Confidence 98654321 122345667889999999999877554433210 0 0 001000
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccC-CCcEEEEecCcc
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMN-EGAVYLWTLPMF 246 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~d~~~~~~p~~ 246 (567)
......... ....+..++++++|+|||||||.||+|.++|+++.+.+......+++. ++|++++.+|++
T Consensus 135 --------~~~~~~~~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 204 (525)
T PRK05851 135 --------ATAAHTNRS--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLY 204 (525)
T ss_pred --------ccccccccc--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCc
Confidence 000000000 001124568999999999999999999999999999988888888888 999999999999
Q ss_pred chhhhHHHHHHhhhcCeeEEecc--C--CHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC-CCcCCCCchhhhhccCCC
Q 008389 247 HCNGWCYTWSLAALCGTSICLRQ--V--TAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE-DTILPLPHVVHVNTAGAA 321 (567)
Q Consensus 247 ~~~g~~~~~~~~~~g~~~~~~~~--~--~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~i~~~G~~ 321 (567)
|.+|+...+.+++.|+++++.+. + ++..+++.++++++|++...|.++..+...... .... ++++|.+++||++
T Consensus 205 h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~-l~~lr~~~~gG~~ 283 (525)
T PRK05851 205 HDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVD-LGALRVALNGGEP 283 (525)
T ss_pred cCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCC-HHHhheeEecccc
Confidence 99999887778888888877652 3 578899999999999885544444444332221 1223 7899999999999
Q ss_pred CCHHHHHHHHh----cCC---eeeeccCCccCcCCcccccCCCCCC--CC--ChhhhhhhhccCCceeccccceeEeeCC
Q 008389 322 PPPSVLHAMSQ----KGF---HVTHTYGLSETYGPSTVCAWKPEWD--SL--PPETQARMKARQGVRFIGLEKLDVIDTR 390 (567)
Q Consensus 322 l~~~~~~~~~~----~~~---~i~~~YG~tE~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~G~~~~~~~~~~i~d~~ 390 (567)
+++++.+++.+ +++ ++++.||+||++..++......... .. .........+++|.|++++ +++|+|++
T Consensus 284 l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~ 362 (525)
T PRK05851 284 VDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGD 362 (525)
T ss_pred CCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCC
Confidence 99999888874 344 5999999999976554322110000 00 0000112346789999999 89999988
Q ss_pred CCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHH
Q 008389 391 TQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVEN 470 (567)
Q Consensus 391 ~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~ 470 (567)
.+.+++.+ +.|||+++|+.++.||++++..+ .+|||+|||+|+++ +|.++++||.||+||++|++|+|.+||+
T Consensus 363 ~~~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~ 435 (525)
T PRK05851 363 GAAGVAGR--EIGEIEIRGASMMSGYLGQAPID----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIER 435 (525)
T ss_pred CCccCCCC--CeEEEEEecCchhhccccCCccC----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHH
Confidence 66678877 88999999999999999988643 37899999999997 8999999999999999999999999999
Q ss_pred HHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCC--CCCceeecCc---ccCCCCc
Q 008389 471 MMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAY--WVPKSIVFGP---LPKTATG 545 (567)
Q Consensus 471 ~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~i~~~~---lP~t~~G 545 (567)
+|.++|+|.+++|++.+++..++.+.++++.... ..+.+ ++.+.++++++.+ +.|..+.+++ ||+|++|
T Consensus 436 ~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~--~~~~~----~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~G 509 (525)
T PRK05851 436 VAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFR--GPDEA----GARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSG 509 (525)
T ss_pred HHHhCCCcccceEEEEEecCCCCceeEEEEEEec--CcchH----HHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcch
Confidence 9999999999999999988878777777664421 22332 3334444444444 7898888764 9999999
Q ss_pred cccHHHHHHHHHHc
Q 008389 546 KIQKHVLRAKAKEM 559 (567)
Q Consensus 546 Ki~r~~l~~~~~~~ 559 (567)
|++|+.|++.+.+.
T Consensus 510 Ki~r~~L~~~~~~~ 523 (525)
T PRK05851 510 KLRRLAVKRSLEAA 523 (525)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 82
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-64 Score=529.82 Aligned_cols=508 Identities=26% Similarity=0.342 Sum_probs=410.7
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+.++.++|.+.++++|+++|+++.+..+||.||+++++++|..|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 22 ~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v 101 (557)
T PRK07059 22 YPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVV 101 (557)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCc-cc-------------c
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDP-KD-------------L 164 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~-------------~ 164 (567)
|+++.++.+++.++++.++++++++++.....+.+..... ....++......... .. .
T Consensus 102 ~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (557)
T PRK07059 102 NVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT--------AVKHVVVASMGDLLGFKGHIVNFVVRRVKKMV 173 (557)
T ss_pred ccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc--------CCceeEEecccccccccccccccccccccccc
Confidence 9999999999999999999999999877655444332111 122222221100000 00 0
Q ss_pred hhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc----cC---CCc
Q 008389 165 KYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG----MN---EGA 237 (567)
Q Consensus 165 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~----~~---~~d 237 (567)
..........+.+.+..............++++++++|||||||.||+|.++|.+++.++......+. .. ...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 253 (557)
T PRK07059 174 PAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQL 253 (557)
T ss_pred cccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCc
Confidence 00011223445555544332222223456789999999999999999999999999876544333221 11 234
Q ss_pred EEEEecCccchhhhHH-HHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhh
Q 008389 238 VYLWTLPMFHCNGWCY-TWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHV 315 (567)
Q Consensus 238 ~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i 315 (567)
.+++.+|++|.+++.. .+..+..|++.++.+ ..++..+++.++++++|.+.++|+++..+.......... ++++|.+
T Consensus 254 ~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~ 332 (557)
T PRK07059 254 NFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLD-FSKLIVA 332 (557)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCC-chhheEE
Confidence 6788899999988753 445566777777665 358899999999999999999999999999876554444 7899999
Q ss_pred hccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCc
Q 008389 316 NTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQP 394 (567)
Q Consensus 316 ~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~ 394 (567)
+.||+++++.+.+.+.+ +++++++.||+||++.+++.+.... .....++|.|++++ .++|+|++ +++
T Consensus 333 ~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~-~~~ 400 (557)
T PRK07059 333 NGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA----------TEFSGTIGLPLPST-EVSIRDDD-GND 400 (557)
T ss_pred EeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC----------CCcCCcccCccCCc-EEEEECCC-CCC
Confidence 99999999999988885 5899999999999987655432111 11236889999999 89999976 888
Q ss_pred cCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHh
Q 008389 395 VPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMY 473 (567)
Q Consensus 395 ~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~ 473 (567)
++.| +.|||+++|+.++.||+++++.+...| .+|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.+.
T Consensus 401 ~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~ 478 (557)
T PRK07059 401 LPLG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVA 478 (557)
T ss_pred CCCC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHH
Confidence 9888 789999999999999999998887776 5899999999999999999999999999999999999999999999
Q ss_pred cCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHH
Q 008389 474 LHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVL 552 (567)
Q Consensus 474 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l 552 (567)
++++|.+++|++.++...|+.++++++..+. ..+. +++++++.++++.+.+|..+.+++ +|+|++||++|+.|
T Consensus 479 ~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~--~~~~----~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L 552 (557)
T PRK07059 479 SHPGVLEVAAVGVPDEHSGEAVKLFVVKKDP--ALTE----EDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRREL 552 (557)
T ss_pred hCCceeEEEEEecccCCCCeeEEEEEEeCCC--CCCH----HHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHH
Confidence 9999999999999988888889998886543 2333 678889999999999999999888 99999999999999
Q ss_pred HHH
Q 008389 553 RAK 555 (567)
Q Consensus 553 ~~~ 555 (567)
+++
T Consensus 553 ~~~ 555 (557)
T PRK07059 553 RDG 555 (557)
T ss_pred Hhh
Confidence 865
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.1e-63 Score=526.01 Aligned_cols=510 Identities=25% Similarity=0.372 Sum_probs=407.5
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
++-|+.++|+++++++|+++|+++.++.+||.||.++++++|..|.+.|+.+||+|+++++|+++++++++||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 35599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcc---cchhccCCChHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPK---DLKYALGRGAVE 174 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~ 174 (567)
+|++|..+.+++.++++.++++.+++++.. .......+.... . ....++.+........ ...........+
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~-~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLA-ALLPMALKFLEK--G---LLDRLIVCEDDNWGKVGTPQAPIPADPRIVT 172 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCch-hhhHHHHHhhhc--c---cceEEEEecccccccccccccccCCCccccc
Confidence 999999999999999999999999997642 111111111110 0 1233333332110000 000011123345
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh------ccCCCcEEEEecCccch
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW------GMNEGAVYLWTLPMFHC 248 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~------~~~~~d~~~~~~p~~~~ 248 (567)
+++++........+ ....++++++++|||||||.||+|.++|+++....... ..+ .....+++++..|++|.
T Consensus 173 ~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~ 250 (541)
T TIGR03205 173 YADFVKGAAAPAEW-PAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHI 250 (541)
T ss_pred HHHHHhcCCCCCCC-CCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHH
Confidence 66666543222111 23456899999999999999999999999987654422 222 12345789999999999
Q ss_pred hhhHHHHH-HhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHH
Q 008389 249 NGWCYTWS-LAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVL 327 (567)
Q Consensus 249 ~g~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~ 327 (567)
+++...+. ++..|++++....+++..+++.|+++++|++.++|+++..+++........ ++++|.+++||+++++++.
T Consensus 251 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~i~~gg~~~~~~~~ 329 (541)
T TIGR03205 251 YALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRD-LSSLATIGSGGAPLPVEVA 329 (541)
T ss_pred HHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccC-ccccceEEEccccCCHHHH
Confidence 88876544 445566666666789999999999999999999999999998754333333 7889999999999999999
Q ss_pred HHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEee-CCCCCccCCCCCceEEE
Q 008389 328 HAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVID-TRTQQPVPADGKTIGEI 405 (567)
Q Consensus 328 ~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d-~~~~~~~~~~~~~~Gei 405 (567)
+++.+ ++.++++.||+||++..++.+.... .....++|.|++++ .++|.+ .+++++++.+ +.|||
T Consensus 330 ~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel 396 (541)
T TIGR03205 330 NFFERKTGLKLKSGWGMTETCSPGTGHPPEG----------PDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGEL 396 (541)
T ss_pred HHHHHHhCCCeecccccccCCcccccCCCCC----------CCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEE
Confidence 98875 4899999999999987665442211 11235789999999 788764 3447888877 78999
Q ss_pred EEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEE
Q 008389 406 VMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVA 485 (567)
Q Consensus 406 ~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 485 (567)
+++|++++.||+++++.+.+.|.++||+|||+++++++|++++.||.+|+|+++|++++|.+||+.+.++++|.+++|++
T Consensus 397 ~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~ 476 (541)
T TIGR03205 397 RIRGPNVTRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIG 476 (541)
T ss_pred EEecCCccccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEe
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 486 RADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
.+++..++.+++++++.++....+. +++.++++++|+.+++|..+.+++ ||+|++||++|++|+
T Consensus 477 ~~~~~~~~~~~~~v~~~~~~~~~~~----~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 477 IPDQYRGEAAKAFVKLRPGAKPFSL----DELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred cCCcccCceEEEEEEECCCCCcCCH----HHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 9988878899999998876423344 678889999999999999999888 999999999999874
No 84
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=9.8e-65 Score=512.51 Aligned_cols=501 Identities=26% Similarity=0.346 Sum_probs=389.0
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECC----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGS----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
..++.+++.+.++.+|+.+|+.... +.+||+|+.+++.++|.+|...|+..||+|+|++.|+++|+++.+||+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g 94 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALG 94 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 4688999999999999999998643 899999999999999999999999779999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccch-HHHHHHHHHHhhhcCCCCCCCeEEEecC---CCCC--cccchhcc
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYF-KLAEEALKIMEEKSNGRFKPPLLIVIGD---ESCD--PKDLKYAL 168 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~--~~~~~~~~ 168 (567)
++.||++++.+++++.++|+.++++++|++.... +.+......++ ....++...+ .... ........
T Consensus 95 ~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (613)
T COG1022 95 AVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCP-------KVVDLIVIIDLVREAVEAKALVLEVFP 167 (613)
T ss_pred CeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhcccc-------chhhhhhhhhhhhhccchhhccccccc
Confidence 9999999999999999999999999999988543 33333322111 0111110000 0000 00000000
Q ss_pred CCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc-cCCCcEEEEecCccc
Q 008389 169 GRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG-MNEGAVYLWTLPMFH 247 (567)
Q Consensus 169 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~d~~~~~~p~~~ 247 (567)
..+...+ . +.... ......+..++|.|.|+|||||||.||||.+||+|+++++......+. ++++|+.++.+|+.|
T Consensus 168 ~~~~~~~-~-~~~~~-~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaH 244 (613)
T COG1022 168 DEGISLF-L-IDSAG-LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAH 244 (613)
T ss_pred cccchhh-h-hcccc-cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHH
Confidence 1111111 1 11111 111224678899999999999999999999999999999999999997 999999999999999
Q ss_pred hhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC----C-------------------
Q 008389 248 CNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE----D------------------- 304 (567)
Q Consensus 248 ~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~----~------------------- 304 (567)
++.+.+..... .+++..+....++..++..+++++||++.++|..|+.+.+.... .
T Consensus 245 i~Er~~~~~~~-~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~ 323 (613)
T COG1022 245 IFERAFEGGLA-LYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKI 323 (613)
T ss_pred HHHHHHHHHHH-hhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 99998763333 34444455567999999999999999999999999887632100 0
Q ss_pred ------------------------CcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeeccCCccCcCCcccccCCCCCC
Q 008389 305 ------------------------TILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
Q Consensus 305 ------------------------~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~ 360 (567)
.......+|.+++||+++++++..+++..|+++.++||+||+++.++.+...
T Consensus 324 ~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~---- 399 (613)
T COG1022 324 SRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPD---- 399 (613)
T ss_pred HhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEcccc----
Confidence 0010247788999999999999999999999999999999998888876433
Q ss_pred CCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhccc-CCccccCceEE
Q 008389 361 SLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFA-NGWYHTGDLGV 439 (567)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~ 439 (567)
....+++|.|+|++ +++|.|. |||+|+||++++|||++|+.|.+.|. ||||+|||+|.
T Consensus 400 -------~~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~ 458 (613)
T COG1022 400 -------RFVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGE 458 (613)
T ss_pred -------CcccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeE
Confidence 23458899999999 8999982 99999999999999999999999996 99999999999
Q ss_pred EeCCCcEEEeccccceee-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccc-----------
Q 008389 440 KHPDNYIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDK----------- 507 (567)
Q Consensus 440 ~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~----------- 507 (567)
++++|+|+++||.+|+|+ .+|++|.|..||..+.++|.|.+++|++..+.. +.+.|++..+.-.
T Consensus 459 ~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~~----~~AlIvp~~~~l~~~a~~~~~~~~ 534 (613)
T COG1022 459 LDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKKF----LVALIVPDFDALEKWAESLNKVIS 534 (613)
T ss_pred EcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCcc----eEEEEeCCHHHHHHHHHhcccccc
Confidence 999999999999999999 999999999999999999999999999954444 8888888664211
Q ss_pred hhh------HHHHHHHHHHHHh---cCCCCCCCceeecCc--cc-----CCCCccccHHHHHHHHHHc
Q 008389 508 SNE------QQLAEDIMKFCRA---KMPAYWVPKSIVFGP--LP-----KTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 508 ~~~------~~~~~~l~~~l~~---~l~~~~~p~~i~~~~--lP-----~t~~GKi~r~~l~~~~~~~ 559 (567)
.+. ..+.+.+...+.+ ....+..+..+.+.+ +. .|++=|++|+...+.+.+.
T Consensus 535 ~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~ 602 (613)
T COG1022 535 ASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDE 602 (613)
T ss_pred CCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhH
Confidence 011 1222333333332 234556666666543 33 6889999999998887764
No 85
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.3e-64 Score=577.64 Aligned_cols=514 Identities=20% Similarity=0.263 Sum_probs=416.8
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC-CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG-STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~-~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
..|+.+.+++.++++|+++|+++. ++++||+||+++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+++
T Consensus 614 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~ 692 (1146)
T PRK08633 614 LPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKVP 692 (1146)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCEE
Confidence 468999999999999999999974 5899999999999999999987 48999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHH
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEK 177 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (567)
+|+++..+.+++.++++++++++++++++..+.+.+..... .......++.+++..... .....+.+
T Consensus 693 v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 759 (1146)
T PRK08633 693 VNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDL-----ELPENVKVIYLEDLKAKI--------SKVDKLTA 759 (1146)
T ss_pred EEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCch-----hcccCceEEEeehhcccc--------chhHHHHH
Confidence 99999999999999999999999999877655443210000 000223344443211100 01112222
Q ss_pred HHhcCC-CC----CCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhH
Q 008389 178 FLQTGD-PQ----FDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWC 252 (567)
Q Consensus 178 ~l~~~~-~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~ 252 (567)
...... +. .....+..++++++++|||||||.||+|.+||+++..+.......++++++|++++.+|++|..|+.
T Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~ 839 (1146)
T PRK08633 760 LLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLT 839 (1146)
T ss_pred HHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHH
Confidence 222110 00 0001235678999999999999999999999999999988888888999999999999999999987
Q ss_pred H-HHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHH
Q 008389 253 Y-TWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAM 330 (567)
Q Consensus 253 ~-~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~ 330 (567)
. .+.....|+++++.+ .+++..+++.++++++|++.++|++++.+.+........ ++++|.+++||+++++++.+.+
T Consensus 840 ~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~~~~~~~~~~ 918 (1146)
T PRK08633 840 VTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLM-FASLRLVVAGAEKLKPEVADAF 918 (1146)
T ss_pred HHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCccc-CCCeeeEEEcCCcCCHHHHHHH
Confidence 6 455566777777665 478999999999999999999999999998765444444 8899999999999999999999
Q ss_pred Hh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 331 SQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 331 ~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
++ +++++++.||+||++++++........... ........+++|.|+|++ +++|+|++++++++.| +.|||+++|
T Consensus 919 ~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~-~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v~g 994 (1146)
T PRK08633 919 EEKFGIRILEGYGATETSPVASVNLPDVLAADF-KRQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILIGG 994 (1146)
T ss_pred HHHhCCCeecccccccCcceEEEecCccccccc-ccccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEEcC
Confidence 85 599999999999998766543221110000 001112357899999999 8999999889999988 889999999
Q ss_pred ccccccccCCCccchhcccC----CccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCC--CceeeEE
Q 008389 410 NVVMKGYLKNPKANEETFAN----GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHP--AVLEASV 483 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~----g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~--~i~~~~v 483 (567)
+.++.||+++++.+.+.|.+ |||+|||+|++++||++++.||.||+||++|++|+|.|||+++.+++ .+.+++|
T Consensus 995 ~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v 1074 (1146)
T PRK08633 995 PQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAV 1074 (1146)
T ss_pred CCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEE
Confidence 99999999999999888877 99999999999999999999999999999999999999999999998 4668999
Q ss_pred EEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHh-cCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 484 VARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRA-KMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 484 ~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
++.+++..|+.++++++.. ..+. +++++++.+ +++.+++|..+++++ +|+|++||++|+.|++...+.
T Consensus 1075 ~~~~~~~~g~~~~~~v~~~----~~~~----~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1075 TAVPDEKKGEKLVVLHTCG----AEDV----EELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred EeccCCCCCcEEEEEEecC----ccCH----HHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 9999998899999988752 2233 567777764 699999999999888 999999999999999987664
No 86
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7.2e-65 Score=625.18 Aligned_cols=488 Identities=19% Similarity=0.253 Sum_probs=416.3
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+.|+.++|++++.++|+++|+++.++++||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|++|.++.+++.++++.+++++++++....+.+... .....+.++....
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~------------~~~~~~~~~~~~~------------------- 3222 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP------------AGDTALTLDRLDL------------------- 3222 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc------------cCCceeeecchhh-------------------
Confidence 999999999999999999999999987654432110 1112222222100
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
.......+.....++++++++|||||||.||||.++|+++.+.+......++++++|+++...|++|..+....+..+
T Consensus 3223 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 3300 (3956)
T PRK12467 3223 --NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTL 3300 (3956)
T ss_pred --cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHH
Confidence 011111122335678999999999999999999999999999999998999999999999999999999988888889
Q ss_pred hhcCeeEEecc--CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--C
Q 008389 259 ALCGTSICLRQ--VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--G 334 (567)
Q Consensus 259 ~~g~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~ 334 (567)
..|+++++.+. .++..+++.|+++++|++.++|+++..+++..... . ++++|.+++|||+++++..+.+.+. +
T Consensus 3301 ~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~--~-~~~lr~~~~gGe~~~~~~~~~~~~~~~~ 3377 (3956)
T PRK12467 3301 ICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGGA--D-CASLDIYVFGGEAVPPAAFEQVKRKLKP 3377 (3956)
T ss_pred hCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccccc--C-CCCceEEEEecCCCCHHHHHHHHHhCCC
Confidence 99999888765 68999999999999999999999999998654322 2 7889999999999999999999854 6
Q ss_pred CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccc
Q 008389 335 FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMK 414 (567)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~ 414 (567)
+++++.||+||++..++......+ ........++|+|++++ .+.|+|.+ ++++|.| +.|||+|+|+.+++
T Consensus 3378 ~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~~-~~~vp~G--~~GEL~i~G~~v~~ 3447 (3956)
T PRK12467 3378 RGLTNGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDGQ-LNPVPVG--VAGELYIGGVGLAR 3447 (3956)
T ss_pred CEEEeCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECCC-CCCCCCC--CCceEEEcchhhhh
Confidence 789999999999776654332111 01112236789999999 89999976 8999998 89999999999999
Q ss_pred cccCCCccchhccc--------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 415 GYLKNPKANEETFA--------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 415 gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
||+++++.+.++|. ++||+|||+|++++||.++++||+||+||++|.+|++.|||++|.++|+|.+++|++.
T Consensus 3448 GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~ 3527 (3956)
T PRK12467 3448 GYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLAR 3527 (3956)
T ss_pred hccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEe
Confidence 99999999999983 2479999999999999999999999999999999999999999999999999999987
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
.. ..+++++++++...+. .... ++++++++++||.|++|..+++++ +|+|++||++|++|++...+
T Consensus 3528 ~~-~~~~~lva~v~~~~~~-~~~~----~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3528 DG-AGGKQLVAYVVPADPQ-GDWR----ETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred cC-CCCcEEEEEEeCCCCC-cccH----HHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCCcc
Confidence 54 3578999999977653 2233 688999999999999999999888 99999999999999876543
No 87
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-64 Score=541.47 Aligned_cols=510 Identities=19% Similarity=0.266 Sum_probs=386.6
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC---------------------------CccccHHHHHHHHHHHHHHHHHccCCCCC
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG---------------------------STRYTWLQTYQRCRRLASALCKRSIGLGC 71 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~---------------------------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd 71 (567)
..|+.++|.++++.+||++|+.+. .+++||+||.++++++|..|.++|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 468999999999999999999983 37899999999999999999999999999
Q ss_pred EEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeE
Q 008389 72 TVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLL 151 (567)
Q Consensus 72 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (567)
+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+........ .....+
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~------~~~~~i 221 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGG------MPNTTI 221 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhcc------CCceEE
Confidence 99999999999999999999999999999999999999999999999999998765544333222110 012345
Q ss_pred EEecCCCCCcccchhccCCChHHHHHHHhcCC---CCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHH
Q 008389 152 IVIGDESCDPKDLKYALGRGAVEYEKFLQTGD---PQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVA 228 (567)
Q Consensus 152 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~ 228 (567)
+.++...... ........+|++++..+. .......+..++++++++|||||||.||||.+||+++.+++....
T Consensus 222 i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~ 297 (700)
T PTZ00216 222 IYLDSLPASV----DTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALE 297 (700)
T ss_pred EEECCCcccc----ccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHH
Confidence 5554321110 011223456777766542 111112334678999999999999999999999999998877665
Q ss_pred HHh----c-cCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccCCHHHHHH-------HHHhhCceEeeeCcHHHHH
Q 008389 229 LIW----G-MNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYS-------AIAKYGVTHFCAAPVVLNS 296 (567)
Q Consensus 229 ~~~----~-~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~-------~i~~~~~t~l~~~p~~~~~ 296 (567)
..+ + +.++|++++.+|++|.+++......+..|+ .+.+. ++..+.+ .+++++||++.++|.+++.
T Consensus 298 ~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~-~v~~~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~ 374 (700)
T PTZ00216 298 DRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGA-LIGFG--SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDT 374 (700)
T ss_pred hhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCC-EEEEC--CHHHhhhhhccccchHHHcCCcEEEechHHHHH
Confidence 443 2 467899999999999999876554444454 44442 4555554 6889999999999999988
Q ss_pred HHcCCCC-------------------------CC---------------cCCCCchhhhhccCCCCCHHHHHHHHhc-CC
Q 008389 297 IVNAPSE-------------------------DT---------------ILPLPHVVHVNTAGAAPPPSVLHAMSQK-GF 335 (567)
Q Consensus 297 l~~~~~~-------------------------~~---------------~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~~ 335 (567)
+.+.... .. ....+++|.+++||+++++++.++++.. +
T Consensus 375 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~- 453 (700)
T PTZ00216 375 IKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG- 453 (700)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-
Confidence 7642100 00 0001578999999999999999888754 6
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCC-ccCCCCCceEEEEEecccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQ-PVPADGKTIGEIVMSGNVVMK 414 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~-~~~~~~~~~Gei~v~~~~~~~ 414 (567)
++++.||+||+++.++..... ....+++|.|++++ +++|+|.+... ..+++ +.|||+|+|++++.
T Consensus 454 ~l~~~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~~ 519 (700)
T PTZ00216 454 MVIQGWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLFK 519 (700)
T ss_pred hHhhccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCcccc
Confidence 999999999997655432211 12347899999999 89999976321 22333 56999999999999
Q ss_pred cccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccceee-eCceecchHHHHHHHhcCCCceee--EEEEeecCC
Q 008389 415 GYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEA--SVVARADER 490 (567)
Q Consensus 415 gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~--~v~~~~~~~ 490 (567)
|||++++.+.+.| .+|||+|||+|++++||+++++||.||+|| .+|++|+|.+||+++.++|.|.++ +|++.++
T Consensus 520 GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~-- 597 (700)
T PTZ00216 520 GYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA-- 597 (700)
T ss_pred hhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC--
Confidence 9999999999999 589999999999999999999999999999 999999999999999999999973 3333332
Q ss_pred CCCcceEEEEEcCCcc-----------c----hhh----HHHHHHHHHHHH-hcCCCCCCCceeecCc--c-c----CCC
Q 008389 491 WGESPCAFVTLKPEVD-----------K----SNE----QQLAEDIMKFCR-AKMPAYWVPKSIVFGP--L-P----KTA 543 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~-----------~----~~~----~~~~~~l~~~l~-~~l~~~~~p~~i~~~~--l-P----~t~ 543 (567)
...++++|++..+.- . .+. +.+.+++.+..+ +.+..+..++.|.+.+ + + .|+
T Consensus 598 -~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~ 676 (700)
T PTZ00216 598 -RSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTA 676 (700)
T ss_pred -CceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCCh
Confidence 245888888753210 0 001 122233333332 4688899999888754 2 2 699
Q ss_pred CccccHHHHHHHHHHc
Q 008389 544 TGKIQKHVLRAKAKEM 559 (567)
Q Consensus 544 ~GKi~r~~l~~~~~~~ 559 (567)
++|++|+++++.|++.
T Consensus 677 t~K~~R~~i~~~y~~~ 692 (700)
T PTZ00216 677 AMKLKRRVIDERYADL 692 (700)
T ss_pred hhccchHHHHHHHHHH
Confidence 9999999999998864
No 88
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=5.8e-64 Score=579.73 Aligned_cols=493 Identities=18% Similarity=0.221 Sum_probs=410.4
Q ss_pred hhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 15 ANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 15 ~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
...+..|+.++|.++++++|+++|+++.++++||+||.+++.++|+.|.+.|+++||+|++++++++++++++|||+++|
T Consensus 453 ~~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G 532 (1296)
T PRK10252 453 VEIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAG 532 (1296)
T ss_pred CCCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhC
Confidence 34556799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++++|+++.++.+++.++++.+++++++++.+....+... ....+..+...
T Consensus 533 ~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~------------~~~~~~~~~~~----------------- 583 (1296)
T PRK10252 533 AAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV------------PDLTSLCYNAP----------------- 583 (1296)
T ss_pred CEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC------------CCceeeecccc-----------------
Confidence 9999999999999999999999999999987654432210 00111111110
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHH
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYT 254 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (567)
.... .........++++++++|||||||.||||.++|+++.+.+.+....++++++|++++..|++|..++...
T Consensus 584 ----~~~~--~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~ 657 (1296)
T PRK10252 584 ----LAPQ--GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEF 657 (1296)
T ss_pred ----cccc--cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHH
Confidence 0000 0011112356789999999999999999999999999999988889999999999999999998888888
Q ss_pred HHHhhhcCeeEEec---cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCc-CCCCchhhhhccCCCCCHHHHHHH
Q 008389 255 WSLAALCGTSICLR---QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTI-LPLPHVVHVNTAGAAPPPSVLHAM 330 (567)
Q Consensus 255 ~~~~~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~-~~l~~lr~i~~~G~~l~~~~~~~~ 330 (567)
+..+..|+++++.+ ..++..+.+.|+++++|++.++|+++..+++....... ..++++|.+++|||++++++.+.+
T Consensus 658 ~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~ 737 (1296)
T PRK10252 658 FWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREW 737 (1296)
T ss_pred HHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHH
Confidence 88888999988875 35889999999999999999999999999876433321 126789999999999999999999
Q ss_pred Hhc-CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 331 SQK-GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 331 ~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
.+. ++++++.||+||++..++......... ..........|.|++++ .+.|+|+. +++++.| +.|||+++|
T Consensus 738 ~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~~-~~~~~~g--~~Gel~i~g 809 (1296)
T PRK10252 738 QQLTGAPLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDAR-MRPVPPG--VAGDLYLTG 809 (1296)
T ss_pred HhcCCCEEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECCC-CCCCCCC--CceEEEecc
Confidence 865 889999999999976655433221110 00011235789999999 89999976 8999998 889999999
Q ss_pred ccccccccCCCccchhccc-------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeE
Q 008389 410 NVVMKGYLKNPKANEETFA-------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEAS 482 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~-------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~ 482 (567)
+.++.||+++++.+...|. ++||+|||+|++++||.++++||.||+||++|.+|++.|||.+|.++|+|.+++
T Consensus 810 ~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~ 889 (1296)
T PRK10252 810 IQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAV 889 (1296)
T ss_pred cccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceE
Confidence 9999999999999988882 349999999999999999999999999999999999999999999999999998
Q ss_pred EEEee----cCCCC--CcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 483 VVARA----DERWG--ESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 483 v~~~~----~~~~g--~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
|++.. +...| ..++++++...+. ..+. ++++++++++||.|++|..+++++ +|+|++||++|++|++.
T Consensus 890 v~~~~~~~~~~~~~~~~~lva~v~~~~~~-~~~~----~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 890 THACVINQAAATGGDARQLVGYLVSQSGL-PLDT----SALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred EEEEeccccccCCCCccEEEEEEEcCCCC-CCCH----HHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCCC
Confidence 77553 11122 3689999877654 3344 678899999999999999999887 99999999999999764
No 89
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4e-63 Score=518.12 Aligned_cols=495 Identities=26% Similarity=0.344 Sum_probs=409.9
Q ss_pred HHHHhhh-hhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecc
Q 008389 23 LWFLDRA-ATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 23 ~~~l~~~-a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.+++++. ++.+||++|+++.+..+||.||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++|++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeecc
Confidence 4566665 677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhc
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQT 181 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 181 (567)
+.++.+++.++++.+++++++++.+..+.+.+....++ ....++.++... .....+.++...
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-----------~~~~~~~~~~~~ 148 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSP-------HLEHRVVVGRPE-----------AGEVQLAELLAT 148 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCC-------CccEEEEeCCCC-----------cccccHHHHhhc
Confidence 99999999999999999999999887666555433222 334444443321 111233444433
Q ss_pred CCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHH-HHHHhccCCCcEEEEecCccchhhhHHHHH-Hhh
Q 008389 182 GDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLS-VALIWGMNEGAVYLWTLPMFHCNGWCYTWS-LAA 259 (567)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~-~~~ 259 (567)
...... .....++++++++|||||||.||+|.++|+++...+.. ....++++++|+++...|++|.+++...+. .+.
T Consensus 149 ~~~~~~-~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~ 227 (508)
T TIGR02262 149 ESEQFK-PAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMS 227 (508)
T ss_pred CCCccC-CCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHH
Confidence 222211 12345688999999999999999999999999887765 445678899999999999999999865444 455
Q ss_pred hcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-cCCee
Q 008389 260 LCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHV 337 (567)
Q Consensus 260 ~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i 337 (567)
.|++.++.+ .+++..+++.|+++++|.+.++|+++..++......... ..++|.++++|+++++++.+.|.+ +++++
T Consensus 228 ~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~-~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v 306 (508)
T TIGR02262 228 VGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAED-QVRLRLCTSAGEALPAEVGQRWQARFGVDI 306 (508)
T ss_pred cCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccc-cccceeEEEcCCCCCHHHHHHHHHHhCCch
Confidence 677666664 368999999999999999999999998887654332223 678999999999999999999885 58999
Q ss_pred eeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccccc
Q 008389 338 THTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYL 417 (567)
Q Consensus 338 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~ 417 (567)
++.||+||++.++..+... ....+.+|.|++++ .++|+|. ++.+++.+ +.|||+++|+.++.||+
T Consensus 307 ~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d~-~~~~~~~g--~~Gel~i~~~~~~~gY~ 371 (508)
T TIGR02262 307 VDGIGSTEMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVGD-GGQDVAAG--EPGELLISGPSSATMYW 371 (508)
T ss_pred hhCccccccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEECC-CCCCCCCC--CeeEEEEecCccccccC
Confidence 9999999998755543211 01236789999999 8999994 58999888 78999999999999999
Q ss_pred CCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceE
Q 008389 418 KNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCA 497 (567)
Q Consensus 418 ~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~ 497 (567)
++++.+...|.++||+|||+++++++|.+++.||.+|+|+.+|.++++.+||+.+.++++|.++++++.++...++++.+
T Consensus 372 ~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~ 451 (508)
T TIGR02262 372 NNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKA 451 (508)
T ss_pred CCHHHhHhhhhcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEE
Confidence 99999988899999999999999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHH
Q 008389 498 FVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRA 554 (567)
Q Consensus 498 ~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (567)
++++.++... .+...+++.+.++++|+.++.|..+.+++ +|+|++||++|+.|++
T Consensus 452 ~v~~~~~~~~--~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 452 FIVLRPGQDI--DTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred EEEeCCCCcc--ccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccC
Confidence 9988766422 12233788999999999999999998877 9999999999999875
No 90
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.8e-63 Score=519.84 Aligned_cols=503 Identities=27% Similarity=0.361 Sum_probs=408.1
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
++|+.++|++.++++|+++|+.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 2 ~~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v 81 (533)
T PRK07798 2 AWNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPV 81 (533)
T ss_pred cccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEE
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|+++.++.+++.++++.+++++++++....+.+.+...... ....++.++...... ...+..+++++
T Consensus 82 ~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~~ 148 (533)
T PRK07798 82 NVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP-------KLRTLVVVEDGSGND------LLPGAVDYEDA 148 (533)
T ss_pred ecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC-------CccEEEEecCCcccc------cCCccccHHHH
Confidence 99999999999999999999999999877666554422221 344555555432111 11134466776
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---------hcc------CCCcEEEEec
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---------WGM------NEGAVYLWTL 243 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---------~~~------~~~d~~~~~~ 243 (567)
+........ ......+.++++|||||||.||+|+++|+++.......... ..+ ..+++++...
T Consensus 149 ~~~~~~~~~--~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (533)
T PRK07798 149 LAAGSPERD--FGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAP 226 (533)
T ss_pred HhccCCcCC--CCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEec
Confidence 655432211 11223455789999999999999999999987654432221 112 5678999999
Q ss_pred CccchhhhHHHHHHhhhcCeeEEec--cCCHHHHHHHHHhhCceEeeeCcHHHHH-HHcCCC-CCCcCCCCchhhhhccC
Q 008389 244 PMFHCNGWCYTWSLAALCGTSICLR--QVTAKAVYSAIAKYGVTHFCAAPVVLNS-IVNAPS-EDTILPLPHVVHVNTAG 319 (567)
Q Consensus 244 p~~~~~g~~~~~~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~t~l~~~p~~~~~-l~~~~~-~~~~~~l~~lr~i~~~G 319 (567)
|++|..++...+.++..|+++++.+ .+++..+++.++++++|.+..+|..+.. +..... ..... ++++|.+++||
T Consensus 227 pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~-~~~l~~i~~gG 305 (533)
T PRK07798 227 PLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYD-LSSLFAIASGG 305 (533)
T ss_pred chhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCC-CCceEEEEECC
Confidence 9999999988888888999999887 7899999999999999999999876543 333222 22223 78999999999
Q ss_pred CCCCHHHHHHHHhc--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCC--ceeccccceeEeeCCCCCcc
Q 008389 320 AAPPPSVLHAMSQK--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQG--VRFIGLEKLDVIDTRTQQPV 395 (567)
Q Consensus 320 ~~l~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~i~d~~~~~~~ 395 (567)
+++++++.+++.+. +..+++.||+||++.+........ ....| .+.++. .++|+|++ ++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~i~~~~-~~~~ 370 (533)
T PRK07798 306 ALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-------------AVHTGGPRFTIGP-RTVVLDED-GNPV 370 (533)
T ss_pred CCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-------------CccCCCCccCCCc-eEEEECCC-CCCC
Confidence 99999999999854 789999999999865444321100 01222 567777 79999987 7788
Q ss_pred CCCCCceEEEEEecccccccccCCCccchhccc----CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHH
Q 008389 396 PADGKTIGEIVMSGNVVMKGYLKNPKANEETFA----NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENM 471 (567)
Q Consensus 396 ~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~----~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~ 471 (567)
+.+....|+++ +++.++.||++++..+...|. ++||+|||+|+++++|.+++.||.+|+|+.+|.+|++.+||.+
T Consensus 371 ~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~ 449 (533)
T PRK07798 371 EPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEA 449 (533)
T ss_pred CCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHH
Confidence 88743236665 566899999999998888773 3599999999999999999999999999999999999999999
Q ss_pred HhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHH
Q 008389 472 MYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKH 550 (567)
Q Consensus 472 l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (567)
+.+++.|.+++|++.++...|+.+.+++++.++. ..+. ++++++++++|+.+++|..+++++ +|+|.+||++|+
T Consensus 450 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~----~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~ 524 (533)
T PRK07798 450 LKAHPDVADALVVGVPDERWGQEVVAVVQLREGA-RPDL----AELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYR 524 (533)
T ss_pred HHhCccceeEEEEeccCcccCceEEEEEEECCCC-CCCH----HHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHH
Confidence 9999999999999999888888899999887664 3444 788899999999999999999887 999999999999
Q ss_pred HHHHHHHH
Q 008389 551 VLRAKAKE 558 (567)
Q Consensus 551 ~l~~~~~~ 558 (567)
.|+++..+
T Consensus 525 ~~~~~~~~ 532 (533)
T PRK07798 525 WAKEQAAE 532 (533)
T ss_pred HHhhhhcc
Confidence 99999875
No 91
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.7e-63 Score=530.41 Aligned_cols=496 Identities=17% Similarity=0.168 Sum_probs=383.2
Q ss_pred hhcccCHHHHHhhhhhcCCCceeEEECC-----ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 16 NYMALTPLWFLDRAATVHPTRTSVVHGS-----TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 16 ~~~~~t~~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
...+.|+.++|++++.++|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 35 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 114 (614)
T PRK08180 35 GDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAA 114 (614)
T ss_pred CCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHH
Confidence 3446799999999999999999998752 68999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCC-----hHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccch
Q 008389 91 PMAGAVLNAVNIRLN-----APTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLK 165 (567)
Q Consensus 91 ~~~G~~~v~i~~~~~-----~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (567)
+++|++++|+++.++ .+++.++++.++++++|++.... +......... ....++.......
T Consensus 115 ~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~------~~~~~i~~~~~~~------ 180 (614)
T PRK08180 115 MYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVP------ADVEVVAVRGAVP------ 180 (614)
T ss_pred HHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhcc------CCceEEEecCCCC------
Confidence 999999999999988 79999999999999999976421 1111111110 1122333322110
Q ss_pred hccCCChHHHHHHHhcCCCCC--CCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccC--CCcEEEE
Q 008389 166 YALGRGAVEYEKFLQTGDPQF--DWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMN--EGAVYLW 241 (567)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~d~~~~ 241 (567)
.....++.+++....... .......++++++|+|||||||.||||.+||+++..+.......++.. .++++++
T Consensus 181 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~ 257 (614)
T PRK08180 181 ---GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVD 257 (614)
T ss_pred ---CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEE
Confidence 011244566554322111 111224568999999999999999999999999998887777666653 5689999
Q ss_pred ecCccchhhhHHHH-HHhhhcCeeEEec-cCC---HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC----CcCCCCch
Q 008389 242 TLPMFHCNGWCYTW-SLAALCGTSICLR-QVT---AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED----TILPLPHV 312 (567)
Q Consensus 242 ~~p~~~~~g~~~~~-~~~~~g~~~~~~~-~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~~l~~l 312 (567)
.+|++|.+|+...+ .++..|+++++.+ .++ ...+++.++++++|+++++|+++..|++..... ... ++++
T Consensus 258 ~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~-~~~l 336 (614)
T PRK08180 258 WLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRF-FSRL 336 (614)
T ss_pred ecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhh-ccce
Confidence 99999999986544 4556677776654 233 357889999999999999999999998643221 122 6899
Q ss_pred hhhhccCCCCCHHHHHHHHhc-------CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceecccccee
Q 008389 313 VHVNTAGAAPPPSVLHAMSQK-------GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLD 385 (567)
Q Consensus 313 r~i~~~G~~l~~~~~~~~~~~-------~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 385 (567)
|.+++||+++++++.+++.+. ++++++.||+||++++++..... ....+++|.|+|++ +++
T Consensus 337 r~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~ 404 (614)
T PRK08180 337 KLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC-EVK 404 (614)
T ss_pred eEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc-EEE
Confidence 999999999999999998852 37899999999997665543211 12347899999999 899
Q ss_pred EeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEE----eCCCcEEEeccccceee-eC
Q 008389 386 VIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVK----HPDNYIEIKDRSKDIII-SG 459 (567)
Q Consensus 386 i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~----~~~g~l~~~GR~~d~i~-~~ 459 (567)
|+|+. ..|||+++|++++.||+++++.+...| .+|||+|||+|++ +++|++++.||.+|+|+ .+
T Consensus 405 i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~ 474 (614)
T PRK08180 405 LVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSS 474 (614)
T ss_pred EecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCC
Confidence 98853 469999999999999999999998888 4899999999999 46899999999999888 68
Q ss_pred ceecc--hHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc--------------chhhHHHHHHHHHHHHh
Q 008389 460 GENIS--SVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD--------------KSNEQQLAEDIMKFCRA 523 (567)
Q Consensus 460 G~~v~--~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~--------------~~~~~~~~~~l~~~l~~ 523 (567)
|++++ +.|+|..+.++|.|.+++|++.+++. +.++|+++++.. ..+. +++++++++
T Consensus 475 G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~----~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~ 546 (614)
T PRK08180 475 GTWVSVGPLRARAVSAGAPLVQDVVITGHDRDE----IGLLVFPNLDACRRLAGLLADASLAEVLAH----PAVRAAFRE 546 (614)
T ss_pred CcEecchhhhHHHHhhcCchhheEEEEcCCCCc----eEEEEEcCHHHHHHHHhhcccCCHHHHhcC----HHHHHHHHH
Confidence 98777 77888999999999999999998764 778888776520 0122 344555554
Q ss_pred cCCCCC--------CCceeecCc-ccCC------CCccccHHHHHHHHHHc
Q 008389 524 KMPAYW--------VPKSIVFGP-LPKT------ATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 524 ~l~~~~--------~p~~i~~~~-lP~t------~~GKi~r~~l~~~~~~~ 559 (567)
.|..+. +|+++.+++ +|++ ++||++|+++.+.|.+.
T Consensus 547 ~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~ 597 (614)
T PRK08180 547 RLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAAL 597 (614)
T ss_pred HHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHH
Confidence 444443 899999877 8865 45688999998888764
No 92
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.3e-63 Score=514.46 Aligned_cols=482 Identities=26% Similarity=0.410 Sum_probs=388.0
Q ss_pred hhhhcCCCceeEEEC--CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCC
Q 008389 28 RAATVHPTRTSVVHG--STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLN 105 (567)
Q Consensus 28 ~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~ 105 (567)
.++.++|+++|+.+. ++++||+||.++++++|+.|.+.|+.+||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 467789999999874 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCC
Q 008389 106 APTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQ 185 (567)
Q Consensus 106 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 185 (567)
.+++.++++.+++++++++.......... .. .....+.+.... .....+++......+.
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKV----GA------DLPLRLSFGGEI-----------DGFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHh----hh------ccceEEEecCcc-----------cccccHHHHhcccCCC
Confidence 99999999999999999987543322211 10 111112222110 0112233332221111
Q ss_pred CCCCCCCCcCceEEEEecCCCCCCCCeeee--ccHHHHHHH----HHHHHHhccCCCcEEEEecCccchhhhHHHHHHhh
Q 008389 186 FDWKPPQDEWQSIALGYTSGTTASPKGVVL--SHRGAYLMS----LSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAA 259 (567)
Q Consensus 186 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~--t~~~l~~~~----~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (567)
..+.++.++|+|||||||.||+|.+ +|.++.... ......+++..+++++..+|++|..++...+..+.
T Consensus 144 -----~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 144 -----LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred -----CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 1122357999999999999999996 455544322 11233567889999999999999998876666667
Q ss_pred hcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHHHHh-cCCe
Q 008389 260 LCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFH 336 (567)
Q Consensus 260 ~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~ 336 (567)
.|+++++...+++..+++.|+++++|.+.++|+++..+.+.... .... ++++|.++.+|+++++++.+.+.+ ++.+
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 297 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYD-VSSLRAVIHAAAPCPVDVKHAMIDWLGPI 297 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCC-hhhhheEEEcCCCCCHHHHHHHHHhcCCc
Confidence 78888877778999999999999999999999999998865432 1223 778999999999999999999885 4889
Q ss_pred eeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccc
Q 008389 337 VTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGY 416 (567)
Q Consensus 337 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy 416 (567)
+++.||+||+++++.... . ......+.+|.|+++. ++|+|.+ +++++.| +.|||+++|++++.||
T Consensus 298 ~~~~YG~tE~~~~~~~~~--~--------~~~~~~~~~G~~~~g~--~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy 362 (501)
T PRK13390 298 VYEYYSSTEAHGMTFIDS--P--------DWLAHPGSVGRSVLGD--LHICDDD-GNELPAG--RIGTVYFERDRLPFRY 362 (501)
T ss_pred eeeeecccccCceEEecc--h--------hhccCCCCcCCcccce--EEEECCC-CCCCCCC--CceEEEEecCCccccc
Confidence 999999999976543211 0 1112346789999983 8889875 8889888 8999999999999999
Q ss_pred cCCCccchhccc---CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCC
Q 008389 417 LKNPKANEETFA---NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGE 493 (567)
Q Consensus 417 ~~~~~~~~~~~~---~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~ 493 (567)
+++++.+...|. ++|++|||+|+++++|++++.||.+|+|+.+|.+|+|.+||+++.+++.|.+++|++.++...++
T Consensus 363 ~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e 442 (501)
T PRK13390 363 LNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGE 442 (501)
T ss_pred cCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCc
Confidence 999998887763 68999999999999999999999999999999999999999999999999999999999998899
Q ss_pred cceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 494 SPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
.+++++++.++. ..+ +...+++.++++++|+.++.|..+++++ ||+|++||++|++|+
T Consensus 443 ~~~~~v~~~~~~-~~~-~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 443 QVKAVIQLVEGI-RGS-DELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred eeEEEEEecCCC-Ccc-hhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 999999887654 211 1233688999999999999999999888 999999999999984
No 93
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.4e-62 Score=514.46 Aligned_cols=491 Identities=22% Similarity=0.282 Sum_probs=409.9
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
|++.++|++++..+|+++|+...+.++||+||.+++.++|..|.+.|+.+|++|+++++|+.++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFL 179 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (567)
+++.++.+++.++++..++++++++.+..... .....+... .+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~------------------~~~~~~ 128 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLEI---------------LGIPVITLD------------------ELKDIF 128 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEecccccccc---------------cCCcEEehH------------------Hhhhhh
Confidence 99999999999999999999999987651100 011111110 111111
Q ss_pred hcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhh
Q 008389 180 QTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAA 259 (567)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~ 259 (567)
... .......+...+++++++|||||||.||+|.++|+++..........+++..+++++...|++|..++...+.++.
T Consensus 129 ~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 207 (503)
T PRK04813 129 ATG-NPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLA 207 (503)
T ss_pred hcc-ccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHh
Confidence 101 1111122346678999999999999999999999999998888888888999999999999999998887777888
Q ss_pred hcCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--C
Q 008389 260 LCGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--G 334 (567)
Q Consensus 260 ~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~ 334 (567)
.|++++..+. .++..+++.++++++|++..+|++++.+.......... ++++|.++++|+++++.+.+++.+. +
T Consensus 208 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~-~~~l~~i~~~G~~l~~~~~~~~~~~~~~ 286 (503)
T PRK04813 208 SGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEH-LPNLTHFLFCGEELPHKTAKKLLERFPS 286 (503)
T ss_pred cCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCccc-CCCceEEEEecCcCCHHHHHHHHHHCCC
Confidence 8998887754 57899999999999999999999998876554333333 7899999999999999999999854 7
Q ss_pred CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccc
Q 008389 335 FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMK 414 (567)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~ 414 (567)
+++++.||+||++..++........ ........+|.+.+++ .++|+|.+ +.+++.+ +.|||+++|+.++.
T Consensus 287 ~~~~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~ 356 (503)
T PRK04813 287 ATIYNTYGPTEATVAVTSIEITDEM------LDQYKRLPIGYAKPDS-PLLIIDEE-GTKLPDG--EQGEIVISGPSVSK 356 (503)
T ss_pred ceEEeCcccchheeEEEEEEecccc------cccCCCCcccccCCCC-EEEEECCC-CCCCCCC--CceEEEEecccccc
Confidence 8999999999997655443222110 1112235689999999 89999975 8888887 78999999999999
Q ss_pred cccCCCccchhccc--C--CccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCC
Q 008389 415 GYLKNPKANEETFA--N--GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADER 490 (567)
Q Consensus 415 gy~~~~~~~~~~~~--~--g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~ 490 (567)
||+++++.+...|. + +||+|||+|++ ++|.+++.||.+|+|+.+|+++++.+||+.+.++|+|.+++|++.++..
T Consensus 357 gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 435 (503)
T PRK04813 357 GYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDH 435 (503)
T ss_pred ccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCC
Confidence 99999998887763 3 49999999999 8999999999999999999999999999999999999999999988777
Q ss_pred CCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHH
Q 008389 491 WGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAK 557 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~ 557 (567)
.++.++++++..++. .....++.++++++++++++.+.+|..+.+++ +|+|++||++|++|++.+.
T Consensus 436 ~~~~~~~~v~~~~~~-~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 436 KVQYLIAYVVPKEED-FEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred CccEEEEEEEecccc-ccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 678899999877653 22233455789999999999999999999888 9999999999999998875
No 94
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.5e-62 Score=515.23 Aligned_cols=512 Identities=24% Similarity=0.345 Sum_probs=409.5
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
..++.++|+++++++|+++|+++.++++||.||.+++.++|..|.+ .|+++||+|+++++|++++++++|||+++|+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 3579999999999999999999999999999999999999999984 899999999999999999999999999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCc--cc--c---------
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDP--KD--L--------- 164 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~--~--------- 164 (567)
+|++|.++.+++.++++.+++++++++.+..+.+.+..... ....++......... .. .
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT--------PVKHVILTRMGDQLSTAKGTLVNFVVKYIKR 173 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc--------CcceEEEecccccccccccccccchhhhccc
Confidence 99999999999999999999999999887655554433211 112222111000000 00 0
Q ss_pred --hhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhc---cCCCcEE
Q 008389 165 --KYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWG---MNEGAVY 239 (567)
Q Consensus 165 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---~~~~d~~ 239 (567)
..........+.+.+...............+++++++|||||||.||+|.++|+++..+.......+. ...++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 253 (560)
T PRK08974 174 LVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELV 253 (560)
T ss_pred ccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEE
Confidence 00000111222233322211111112245689999999999999999999999999877655443332 2446678
Q ss_pred EEecCccchhhhHH-HHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhc
Q 008389 240 LWTLPMFHCNGWCY-TWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNT 317 (567)
Q Consensus 240 ~~~~p~~~~~g~~~-~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~ 317 (567)
+..+|++|.+++.. .+..+..|++.++. ...++..+++.++++++|.+.++|+++..+.......... ++++|.+++
T Consensus 254 ~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~ 332 (560)
T PRK08974 254 VTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELD-FSSLKLSVG 332 (560)
T ss_pred EEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCC-ccceeEEEe
Confidence 88999999988754 34445567766665 3467889999999999999999999999998765544444 789999999
Q ss_pred cCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccC
Q 008389 318 AGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVP 396 (567)
Q Consensus 318 ~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~ 396 (567)
||+++++.+.+.+.+ .++++++.||+||++..++.+.... ......+|.|+|++ .++|+|++ +.+++
T Consensus 333 gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~~-~~~~~ 400 (560)
T PRK08974 333 GGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDDD-GNEVP 400 (560)
T ss_pred cCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECCC-CCCCC
Confidence 999999999999886 4899999999999987766543221 12236789999999 89999976 88888
Q ss_pred CCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCC
Q 008389 397 ADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHP 476 (567)
Q Consensus 397 ~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 476 (567)
.| +.|||+++|+.++.||+++++.+...|.+|||+|||+++++++|.++++||.+|+|+++|.+++|.+||+.+.+++
T Consensus 401 ~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~ 478 (560)
T PRK08974 401 PG--EPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHP 478 (560)
T ss_pred CC--CceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCC
Confidence 88 7899999999999999999999888888999999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 477 AVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 477 ~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
+|.+++|++.++...|+.++++++..+. ..+. +++++++.++++.+..|..+.+++ +|+|++||++|+.|+++
T Consensus 479 ~v~~~~v~~~~~~~~g~~~~~~v~~~~~--~~~~----~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~ 552 (560)
T PRK08974 479 KVLEVAAVGVPSEVSGEAVKIFVVKKDP--SLTE----EELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552 (560)
T ss_pred CeeEEEEEeeecCCcceEEEEEEECCCC--CCCH----HHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHH
Confidence 9999999999988878877777765432 2233 578889999999999999999887 99999999999999998
Q ss_pred HHHc
Q 008389 556 AKEM 559 (567)
Q Consensus 556 ~~~~ 559 (567)
..+.
T Consensus 553 ~~~~ 556 (560)
T PRK08974 553 ARAK 556 (560)
T ss_pred HHhh
Confidence 7654
No 95
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-62 Score=509.21 Aligned_cols=455 Identities=26% Similarity=0.374 Sum_probs=382.5
Q ss_pred hcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHH
Q 008389 31 TVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIA 110 (567)
Q Consensus 31 ~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 110 (567)
...++++|+++.++++||+||.++++++|..|. ++|+|+++++|++++++++|||+++|++++|+++..+.+++.
T Consensus 11 ~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 11 AAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred cccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 356799999999999999999999999999995 579999999999999999999999999999999999999999
Q ss_pred HHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCCCCCCC
Q 008389 111 FLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKP 190 (567)
Q Consensus 111 ~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 190 (567)
++++.+++++++++.+... . ....+ .+.... ..+ ....
T Consensus 86 ~~l~~~~~~~il~~~~~~~---------~-------~~~~~-~~~~~~--------------~~~-----------~~~~ 123 (471)
T PRK07787 86 HILADSGAQAWLGPAPDDP---------A-------GLPHV-PVRLHA--------------RSW-----------HRYP 123 (471)
T ss_pred HHHHhcCCCEEEecCCccc---------c-------cccce-eeeccc--------------ccc-----------ccCC
Confidence 9999999999999764110 0 01111 000000 000 0001
Q ss_pred CCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHH-HHhhhcCeeEEecc
Q 008389 191 PQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTW-SLAALCGTSICLRQ 269 (567)
Q Consensus 191 ~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~ 269 (567)
...++++++++|||||||.||+|.++|+++...+......+++..++++++.+|++|..|+...+ ..+..|++++....
T Consensus 124 ~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 203 (471)
T PRK07787 124 EPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR 203 (471)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC
Confidence 13467999999999999999999999999999888888888899999999999999999987644 45566777777777
Q ss_pred CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcC
Q 008389 270 VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYG 348 (567)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~ 348 (567)
+++..+++.++ +++|.+.++|+++..+.+..... .. ++++|.+++||+++++++.+++.+ ++.++++.||+||++.
T Consensus 204 ~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~-~~-l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 280 (471)
T PRK07787 204 PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAA-RA-LRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLI 280 (471)
T ss_pred CCHHHHHHHHh-hCceEEEcchHHHHHHHhCcccc-cc-ccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCc
Confidence 89999999999 99999999999999998754322 22 788999999999999999999985 5889999999999876
Q ss_pred CcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhccc
Q 008389 349 PSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFA 428 (567)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~ 428 (567)
.++.... ......++|.|++++ .++|+|++ +++++..+.+.|||+++|++++.||+++++.+...|.
T Consensus 281 ~~~~~~~-----------~~~~~~~vG~~~~g~-~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~ 347 (471)
T PRK07787 281 TLSTRAD-----------GERRPGWVGLPLAGV-ETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFT 347 (471)
T ss_pred ceecCCC-----------CcccCCcccccCCCc-EEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchhccc
Confidence 4433211 011236799999999 89999987 7888743335799999999999999999999988885
Q ss_pred -CCccccCceEEEeCCCcEEEeccc-cceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc
Q 008389 429 -NGWYHTGDLGVKHPDNYIEIKDRS-KDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD 506 (567)
Q Consensus 429 -~g~~~TGDl~~~~~~g~l~~~GR~-~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (567)
+|||+|||+|++++||++++.||. +|+++.+|.+++|.+||+.+.+++.|.+++|++.++...++.++++++...+
T Consensus 348 ~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~-- 425 (471)
T PRK07787 348 ADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGADD-- 425 (471)
T ss_pred CCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCCC--
Confidence 899999999999999999999996 8999999999999999999999999999999999988888999999987332
Q ss_pred chhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 507 KSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 507 ~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
.+. +++.+++++++++++.|..+.+++ ||+|++||++|+.|++.
T Consensus 426 -~~~----~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 426 -VAA----DELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred -CCH----HHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 233 678899999999999999999888 99999999999999763
No 96
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.2e-63 Score=621.30 Aligned_cols=482 Identities=20% Similarity=0.258 Sum_probs=412.5
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+.++.++|+++++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|++|.++.+++.++++.+++++++++......+... ....++.++.... .
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~------------~~~~~~~~~~~~~------------------~ 639 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLA------------AGVQVLDLDRPAA------------------W 639 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcc------------cCceEEEecCcch------------------h
Confidence 999999999999999999999999987653322100 1122333322100 0
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
+.. .....+.....++++++++|||||||.||||.++|+++.+.+.+....++++++|+++...|++|..++...+.++
T Consensus 640 ~~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L 718 (5163)
T PRK12316 640 LEG-YSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPL 718 (5163)
T ss_pred hcc-CCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHH
Confidence 111 1111112234678999999999999999999999999999999999999999999999999999999998888889
Q ss_pred hhcCeeEEec---cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--
Q 008389 259 ALCGTSICLR---QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK-- 333 (567)
Q Consensus 259 ~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-- 333 (567)
+.|+++++.+ ..++..+++.|+++++|++.++|++++.|.+..... . ++++|.+++|||++++++.+.+.+.
T Consensus 719 ~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~--~-~~~l~~~~~gGe~l~~~~~~~~~~~~~ 795 (5163)
T PRK12316 719 MSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDVA--S-CTSLRRIVCSGEALPADAQEQVFAKLP 795 (5163)
T ss_pred hCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccccc--c-CCCccEEEEeeccCCHHHHHHHHHhCC
Confidence 9999998874 368999999999999999999999999998754322 2 7899999999999999999998643
Q ss_pred CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccc
Q 008389 334 GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVM 413 (567)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~ 413 (567)
++++++.||+||++..++...... .......+|.|++++ .+.|+|++ ++++|.| +.|||+|+|+.++
T Consensus 796 ~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~~-~~~~p~G--~~GEl~i~G~~v~ 862 (5163)
T PRK12316 796 QAGLYNLYGPTEAAIDVTHWTCVE---------EGGDSVPIGRPIANL-ACYILDAN-LEPVPVG--VLGELYLAGRGLA 862 (5163)
T ss_pred CCeEEeCcCcChheeeeeEEeccc---------ccCCCCCCccccCCC-EEEEECCC-CCCCCCC--CceEEEecccccC
Confidence 789999999999975444322111 112235789999999 89999987 8999988 8899999999999
Q ss_pred ccccCCCccchhccc-------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 414 KGYLKNPKANEETFA-------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 414 ~gy~~~~~~~~~~~~-------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
.||+++++.+...|. ++||+|||+|++++||.++++||.||+||++|++|+|.|||++|.++|+|.+++|++.
T Consensus 863 ~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~ 942 (5163)
T PRK12316 863 RGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAV 942 (5163)
T ss_pred hhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEc
Confidence 999999999998872 3599999999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHH
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKA 556 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (567)
+ ++.++++|+..++. .... ++++++++++||.|++|..+++++ ||+|++||++|++|.+..
T Consensus 943 ~----~~~lva~vv~~~~~-~~~~----~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 943 D----GKQLVGYVVLESEG-GDWR----EALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred C----CCeEEEEEEccCCC-CCCH----HHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 6 56799999987654 3333 689999999999999999999888 999999999999998653
No 97
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-63 Score=612.20 Aligned_cols=501 Identities=21% Similarity=0.265 Sum_probs=418.5
Q ss_pred cccchhhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHh
Q 008389 10 LPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFG 89 (567)
Q Consensus 10 ~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 89 (567)
++....+.++.++.++|+++++++|+++|+++.++++||+||+++++++|+.|.+.|+++|++|++++++++++++++||
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 581 (3956)
T PRK12467 502 WNAPATEYAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLA 581 (3956)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 33344444567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccC
Q 008389 90 VPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALG 169 (567)
Q Consensus 90 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (567)
|+++|++++|++|.++.+++.++++++++++++++.+....+.. . ....++.++....
T Consensus 582 il~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-----~-------~~~~~~~~~~~~~---------- 639 (3956)
T PRK12467 582 VLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPV-----P-------AGLRSLCLDEPAD---------- 639 (3956)
T ss_pred HHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhccc-----c-------cCccEEEeccccc----------
Confidence 99999999999999999999999999999999998754322110 0 1122222222100
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchh
Q 008389 170 RGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCN 249 (567)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 249 (567)
.+.. .....+..+..++++++++|||||||.||||.++|+++.+.+......+++.++|+++...|++|..
T Consensus 640 --------~~~~-~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~ 710 (3956)
T PRK12467 640 --------LLCG-YSGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDL 710 (3956)
T ss_pred --------cccc-cCCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhH
Confidence 0000 0111112235678999999999999999999999999999999988899999999999999999999
Q ss_pred hhHHHHHHhhhcCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHH
Q 008389 250 GWCYTWSLAALCGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSV 326 (567)
Q Consensus 250 g~~~~~~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~ 326 (567)
++...+.++..|+++++.+. .++..+++.|+++++|++.++|++++.+++...... ..++|.+++|||++++++
T Consensus 711 ~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~---~~~lr~i~~gGe~l~~~~ 787 (3956)
T PRK12467 711 GVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVAL---PRPQRALVCGGEALQVDL 787 (3956)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhcccc---CCcccEEEEEeecCCHHH
Confidence 99888888999999988753 689999999999999999999999999987643322 567799999999999999
Q ss_pred HHHHHhc--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEE
Q 008389 327 LHAMSQK--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGE 404 (567)
Q Consensus 327 ~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 404 (567)
.+.+.+. ++++++.||+||++..++........ .......+|.|++++ .+.|+|++ ++++|.| +.||
T Consensus 788 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~-------~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~G--~~GE 856 (3956)
T PRK12467 788 LARVRALGPGARLINHYGPTETTVGVSTYELSDEE-------RDFGNVPIGQPLANL-GLYILDHY-LNPVPVG--VVGE 856 (3956)
T ss_pred HHHHHHhCCCCEEEeCcCCChhhhheeeEeccccc-------ccCCCCcccCCcCCC-EEEEECCC-CCCCCCC--CceE
Confidence 9999865 58999999999998766654322110 001125689999999 89999986 8999998 8999
Q ss_pred EEEecccccccccCCCccchhccc--------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCC
Q 008389 405 IVMSGNVVMKGYLKNPKANEETFA--------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHP 476 (567)
Q Consensus 405 i~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 476 (567)
|+|+|+.+++||+++++.+.++|. ++||+|||+|++++||.++++||.||+||++|.+|+|.|||+.|.++|
T Consensus 857 L~i~G~~v~~GYl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p 936 (3956)
T PRK12467 857 LYIGGAGLARGYHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQP 936 (3956)
T ss_pred EEecccccchhhcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCC
Confidence 999999999999999999998882 249999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 477 AVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 477 ~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
+|.+++|++.++. .+..++++++..............+++++++++.||.|++|..+++++ +|+|++||++|++|++.
T Consensus 937 ~V~~a~v~~~~~~-~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~ 1015 (3956)
T PRK12467 937 GVREAVVLAQPGD-AGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALPKP 1015 (3956)
T ss_pred CcceEEEEEEcCC-CCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcCCc
Confidence 9999999986544 467899999865443222222233789999999999999999999888 99999999999999876
Q ss_pred H
Q 008389 556 A 556 (567)
Q Consensus 556 ~ 556 (567)
.
T Consensus 1016 ~ 1016 (3956)
T PRK12467 1016 D 1016 (3956)
T ss_pred c
Confidence 4
No 98
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.7e-62 Score=510.32 Aligned_cols=459 Identities=17% Similarity=0.205 Sum_probs=353.4
Q ss_pred cCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccc------hHHHHHHHHHHhhhcCCCCCCCe
Q 008389 77 APNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEY------FKLAEEALKIMEEKSNGRFKPPL 150 (567)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 150 (567)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+....... .. .
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~--------~~-~ 71 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA--------PA-K 71 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc--------cc-e
Confidence 589999999999999999999999999999999999999999999998643 12222211110 11 2
Q ss_pred EEEecCCCCCcccchhccCCChHHHHHHHhcCCC----CC-CC-CCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHH
Q 008389 151 LIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDP----QF-DW-KPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMS 224 (567)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~-~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~ 224 (567)
.+.+........ . ........+++++..... .. .. ....+++++++|+|||||||.||||.+||++++...
T Consensus 72 ~i~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 72 AIVLPAAGEPVA-V--PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred EEEEeccCcccC-C--ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 222221100000 0 000122346666532111 00 11 111355899999999999999999999999988776
Q ss_pred HHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCC-
Q 008389 225 LSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPS- 302 (567)
Q Consensus 225 ~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~- 302 (567)
......++++++|++++.+|++|..++...+.++..|+++++.. .+++..+++.|+++++|++.++|+++..|++...
T Consensus 149 ~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~ 228 (499)
T PLN03051 149 SDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF 228 (499)
T ss_pred HHHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc
Confidence 65666678899999999999999999876667777888888876 3688999999999999999999999999987543
Q ss_pred -CCCcCCCCchhhhhccCCCCCHHHHHHHHh-c--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCcee
Q 008389 303 -EDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-K--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRF 378 (567)
Q Consensus 303 -~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 378 (567)
....+ +++||.+++||++++++..+++.+ . ++++++.||+||+++.+...... .....+++|.|.
T Consensus 229 ~~~~~~-~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~ 297 (499)
T PLN03051 229 AMEGLD-WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL----------QPQAPGAFSTAS 297 (499)
T ss_pred ccccCC-chhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc----------CCCCCccccCCC
Confidence 22233 789999999999999999988776 3 37899999999986543321100 011236799999
Q ss_pred ccccceeEeeCCCCCccCCCCCceEEEEEecccc--cccccCCCccchhcccCC----------ccccCceEEEeCCCcE
Q 008389 379 IGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVV--MKGYLKNPKANEETFANG----------WYHTGDLGVKHPDNYI 446 (567)
Q Consensus 379 ~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~--~~gy~~~~~~~~~~~~~g----------~~~TGDl~~~~~~g~l 446 (567)
+++ +++|+|++ |++++.|..+.|||+++|+.+ +.||++++. + ..|.+| ||+|||+|++|+||++
T Consensus 298 ~~~-~~~ivd~~-g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~-~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l 373 (499)
T PLN03051 298 LGT-RFVLLNDN-GVPYPDDQPCVGEVALAPPMLGASDRLLNADH-D-KVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYF 373 (499)
T ss_pred CCc-eEEEECCC-CCCCCCCCCcceEEEEecCcCCCCccccCCcc-c-ceeeecCCccccCCcceeecCCeEEECCCCcE
Confidence 999 89999976 888988754589999999976 579997542 2 233344 6899999999999999
Q ss_pred EEeccccceeeeCceecchHHHHHHHhc-CCCceeeEEEEeecCCCC-CcceEEE---EEcCCccchhhHHHHHHHHHHH
Q 008389 447 EIKDRSKDIIISGGENISSVEVENMMYL-HPAVLEASVVARADERWG-ESPCAFV---TLKPEVDKSNEQQLAEDIMKFC 521 (567)
Q Consensus 447 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~-~~~i~~~~v~~~~~~~~g-~~~~~~v---~~~~~~~~~~~~~~~~~l~~~l 521 (567)
++.||.||+||++|++|+|.|||++|.+ ||+|.+++|++.+++..| +.++++| +++++....+.+++.+.+++++
T Consensus 374 ~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l 453 (499)
T PLN03051 374 CVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAI 453 (499)
T ss_pred EEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHH
Confidence 9999999999999999999999999986 999999999999999888 6788988 7766542345556666777778
Q ss_pred HhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCCc
Q 008389 522 RAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGPV 562 (567)
Q Consensus 522 ~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~ 562 (567)
+++|+.+..|..|.+++ ||+|++||++|++|++++.+...-
T Consensus 454 ~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 495 (499)
T PLN03051 454 QTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKELSG 495 (499)
T ss_pred HhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhhcc
Confidence 88898877777788888 999999999999999988777553
No 99
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.5e-63 Score=620.81 Aligned_cols=488 Identities=21% Similarity=0.268 Sum_probs=413.2
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+.++.++|.++++++|+++|+++.++++||+||++++.++|..|.+.|+++|++|++++++++++++++|||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|++|.++.+++.++++.+++++++++.+....+... .....+.+... ..+
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~------------~~~~~~~~~~~---------------~~~--- 2131 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP------------AGVARLPLDRD---------------AEW--- 2131 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc------------cccceEeccch---------------hhh---
Confidence 999999999999999999999999987654332110 01111222110 000
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
.. .+...+.....++++++|+|||||||.||||.++|+++.+.+......++++++|+++...|++|..++...+.++
T Consensus 2132 -~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 2209 (5163)
T PRK12316 2132 -AD-YPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPL 2209 (5163)
T ss_pred -hc-cCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHH
Confidence 00 0111122235678999999999999999999999999999999988899999999999999999988888888888
Q ss_pred hhcCeeEEecc--CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--C
Q 008389 259 ALCGTSICLRQ--VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK--G 334 (567)
Q Consensus 259 ~~g~~~~~~~~--~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~--~ 334 (567)
+.|+++++.+. +++..+++.|+++++|++.++|+++..+.+....... ..++|.+++|||+++++..+.|.+. +
T Consensus 2210 ~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~--~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 2287 (5163)
T PRK12316 2210 LNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGR--PPAVRVYCFGGEAVPAASLRLAWEALRP 2287 (5163)
T ss_pred hCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccC--CcceeEEEEecccCCHHHHHHHHHhCCC
Confidence 89999866543 5889999999999999999999999999876543332 4589999999999999999999853 6
Q ss_pred CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccc
Q 008389 335 FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMK 414 (567)
Q Consensus 335 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~ 414 (567)
.++++.||+||++..++....... .........+|.|++++ .+.|+|++ ++++|.| ++|||+|+|+.+++
T Consensus 2288 ~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~g--~~GEl~i~G~~v~~ 2357 (5163)
T PRK12316 2288 VYLFNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDAD-LNLLAPG--MAGELYLGGEGLAR 2357 (5163)
T ss_pred cEEEECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECCC-CCCCCCC--CeeEEEecchhhcc
Confidence 789999999999765544322111 00111125689999999 89999987 8899998 89999999999999
Q ss_pred cccCCCccchhccc--------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEe
Q 008389 415 GYLKNPKANEETFA--------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVAR 486 (567)
Q Consensus 415 gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~ 486 (567)
||+++++.+...|. ++||+|||+|++++||.++++||+||+||++|.+|++.|||.+|.++|+|.+++|++.
T Consensus 2358 GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~ 2437 (5163)
T PRK12316 2358 GYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQ 2437 (5163)
T ss_pred cccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEE
Confidence 99999999999882 3599999999999999999999999999999999999999999999999999999988
Q ss_pred ecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHH
Q 008389 487 ADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKA 556 (567)
Q Consensus 487 ~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (567)
++. .++.++++|+..++. ..+. ++++++++++||.|++|..+++++ ||+|++||++|++|++..
T Consensus 2438 ~~~-~~~~l~a~v~~~~~~-~~~~----~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 2502 (5163)
T PRK12316 2438 DGA-SGKQLVAYVVPDDAA-EDLL----AELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKPD 2502 (5163)
T ss_pred ecC-CCeEEEEEEEecCCC-ccCH----HHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCCc
Confidence 766 578999999987765 3334 789999999999999999999888 999999999999997653
No 100
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-61 Score=505.55 Aligned_cols=491 Identities=26% Similarity=0.357 Sum_probs=400.7
Q ss_pred eeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhcc
Q 008389 37 TSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHS 116 (567)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~ 116 (567)
.|+...++.+||.||.++++++|+.|.+.|+.+||+|+++++|+++++++++||+++|++++++++.++.+++.++++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCc-----ccchhccCCChHHHHHHHhcCCCCCCCCCC
Q 008389 117 ASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDP-----KDLKYALGRGAVEYEKFLQTGDPQFDWKPP 191 (567)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 191 (567)
++++++++......+.+.. + ....++.+....... .............+++++...... ..
T Consensus 83 ~~~~i~~~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 148 (509)
T PRK12406 83 GARVLIAHADLLHGLASAL---P-------AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPY----DG 148 (509)
T ss_pred CCcEEEEccchhhhhhhhh---h-------cccceeecccccccccccccccccccCCCCccCHHHHhcccCcc----CC
Confidence 9999999887655443221 1 111122111110000 000001122334566554332211 12
Q ss_pred CCcCceEEEEecCCCCCCCCeeeeccHHH---HHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec
Q 008389 192 QDEWQSIALGYTSGTTASPKGVVLSHRGA---YLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR 268 (567)
Q Consensus 192 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l---~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~ 268 (567)
...+++++++|||||||.||+|.++|... ..........+++.+++++++..|++|..+..+.+..+..|+++++.+
T Consensus 149 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 228 (509)
T PRK12406 149 PPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQP 228 (509)
T ss_pred CCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEcc
Confidence 34679999999999999999999876543 333444456678899999999999999988887777788899888888
Q ss_pred cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHHHHhc-CCeeeeccCCcc
Q 008389 269 QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHAMSQK-GFHVTHTYGLSE 345 (567)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~~~i~~~YG~tE 345 (567)
..++..+++.++++++|.+.++|+++..++..... ...+ ++++|.+++||+++++++.+++.+. ++.+++.||+||
T Consensus 229 ~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 307 (509)
T PRK12406 229 RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYD-VSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTE 307 (509)
T ss_pred CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCC-CCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccc
Confidence 88999999999999999999999999999875432 2233 7899999999999999999999864 889999999999
Q ss_pred CcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccc-cccCCCccch
Q 008389 346 TYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMK-GYLKNPKANE 424 (567)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~-gy~~~~~~~~ 424 (567)
++.+++.+... .....+++|.|++++ .++++|+. +++++.+ +.|||+++++.++. ||+++++.+.
T Consensus 308 ~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~ 373 (509)
T PRK12406 308 SGAVTFATSED----------ALSHPGTVGKAAPGA-ELRFVDED-GRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRA 373 (509)
T ss_pred cCceEecCccc----------ccccCCCcCccCCCc-EEEEECCC-CCCCCCC--CceEEEEECCccccccccCCchhcc
Confidence 98755432211 112236789999999 89999976 8888888 78999999998875 9999998888
Q ss_pred hcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCC
Q 008389 425 ETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPE 504 (567)
Q Consensus 425 ~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~ 504 (567)
..+.++||+|||+++++++|.+++.||.+|+|+++|.+|++.+||+.|.++++|.++++++.++...++.+++++++.++
T Consensus 374 ~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 453 (509)
T PRK12406 374 EIDRGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPG 453 (509)
T ss_pred cccCCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCC
Confidence 88889999999999999999999999999999999999999999999999999999999999988778889999988765
Q ss_pred ccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCC
Q 008389 505 VDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGP 561 (567)
Q Consensus 505 ~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~ 561 (567)
. ..+. +++++.+++.++++++|..+.+.+ +|+|++||++|++|++.+.+.+.
T Consensus 454 ~-~~~~----~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~~ 506 (509)
T PRK12406 454 A-TLDE----ADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANAG 506 (509)
T ss_pred C-CCCH----HHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhcc
Confidence 4 3344 678899999999999999999887 99999999999999999887653
No 101
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.2e-62 Score=501.06 Aligned_cols=430 Identities=17% Similarity=0.191 Sum_probs=357.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHccC-CCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSI-GLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi 122 (567)
..+.|+||.+++.++|+.|.+.|+ .+|++|+++++|++++++++|||+++|++++|++|.++.+++.++++.+++++++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 347899999999999999999988 5799999999999999999999999999999999999999999999999999999
Q ss_pred EcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEe
Q 008389 123 VDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGY 202 (567)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 202 (567)
++.+.... . .... . . ......++++++++|
T Consensus 98 ~~~~~~~~-----------------~-----~~~~----------------~--------~----~~~~~~~~~~~~i~~ 127 (452)
T PRK07445 98 GLDQLKLS-----------------H-----PPPL----------------P--------S----QGILPNLETGWIMIP 127 (452)
T ss_pred ecCccccc-----------------c-----CCCC----------------C--------c----cccCCCCCCcEEEEe
Confidence 87653210 0 0000 0 0 001134578999999
Q ss_pred cCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhh
Q 008389 203 TSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKY 282 (567)
Q Consensus 203 TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 282 (567)
||||||.||+|.+||+++...+......+++.+ ++.++.+|++|.+|+...+.++..|+++++.+............++
T Consensus 128 TSGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~ 206 (452)
T PRK07445 128 TGGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNP 206 (452)
T ss_pred CCCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhc
Confidence 999999999999999999888887777777765 4678899999999998777788889988777533223233444578
Q ss_pred CceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeeccCCccCcCCcccccCCCCCCCC
Q 008389 283 GVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSL 362 (567)
Q Consensus 283 ~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 362 (567)
+++++.++|++++.+++.. ... ++++|.+++||+++++++.+.+.+.++++++.||+||+++.+.....
T Consensus 207 ~~t~~~~vP~~l~~l~~~~---~~~-l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~------- 275 (452)
T PRK07445 207 SDFFLSLVPTQLQRLLQLR---PQW-LAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKP------- 275 (452)
T ss_pred CceEEEehHHHHHHHHhhC---hhh-hhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCc-------
Confidence 9999999999999998632 122 78999999999999999999888779999999999998765443211
Q ss_pred ChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeC
Q 008389 363 PPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHP 442 (567)
Q Consensus 363 ~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~ 442 (567)
........++|.|+|++ +++|++ + +.|||+++|+.++.||++++.. .+|||+|||+|++++
T Consensus 276 --~~~~~~~~~~G~~~p~~-~v~i~~---------g--~~Gel~v~g~~~~~gY~~~~~~-----~~g~~~TGDl~~~d~ 336 (452)
T PRK07445 276 --DDFLAGNNSSGQVLPHA-QITIPA---------N--QTGNITIQAQSLALGYYPQILD-----SQGIFETDDLGYLDA 336 (452)
T ss_pred --hhhccCCCcCCccCCCC-eEEEcC---------C--CcceEEEeCCccchhhcCCccC-----CCCEEECCCEEEEcC
Confidence 11112246789999999 788871 2 6799999999999999975431 378999999999999
Q ss_pred CCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHH
Q 008389 443 DNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCR 522 (567)
Q Consensus 443 ~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~ 522 (567)
||++++.||.||+|+++|++|+|.+||+++.++|+|.+++|++.+++..|+.++++++..++. .+. ++++++++
T Consensus 337 dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~--~~~----~~l~~~~~ 410 (452)
T PRK07445 337 QGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPS--ISL----EELKTAIK 410 (452)
T ss_pred CCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCC--CCH----HHHHHHHH
Confidence 999999999999999999999999999999999999999999999998899999999987652 233 68899999
Q ss_pred hcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 523 AKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 523 ~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
++|+.+++|+.+++++ +|+|++||++|++|++++.+..
T Consensus 411 ~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 449 (452)
T PRK07445 411 DQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRL 449 (452)
T ss_pred HhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhh
Confidence 9999999999999888 9999999999999999987753
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=8.8e-63 Score=612.10 Aligned_cols=493 Identities=20% Similarity=0.248 Sum_probs=415.2
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+.++.++|.+++.++|+++|+++.+.++||+||+++++++|+.|.+.|+++|++|+|++++++++++++||++++|++++
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|++|.++.+++.++++.+++++++++....+........+... ....++..+...
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------------------- 3853 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA-----NRPRLLVWEEVQ-------------------- 3853 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc-----cccceeeecccc--------------------
Confidence 9999999999999999999999999988765444332222100 111222221110
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
....+...+.....+++.+|++|||||||.||||+++|+++.+.+......++++++|+++...++.+..++...+.++
T Consensus 3854 -~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l 3932 (4334)
T PRK05691 3854 -AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAP 3932 (4334)
T ss_pred -cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHH
Confidence 0001111122235678999999999999999999999999999999888899999999999999999999999999999
Q ss_pred hhcCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc--
Q 008389 259 ALCGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK-- 333 (567)
Q Consensus 259 ~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-- 333 (567)
+.|+++++++. .++..+++.++++++|++.++|+.+..++..... .+++||.+++|||++++++.+.|.+.
T Consensus 3933 ~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~----~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 4008 (4334)
T PRK05691 3933 LFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ----ALDGLRWMLPTGEAMPPELARQWLQRYP 4008 (4334)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc----cCCCceEEEecCCcCCHHHHHHHHHhCC
Confidence 99999988754 5789999999999999999999999998754321 27889999999999999999999754
Q ss_pred CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccc
Q 008389 334 GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVM 413 (567)
Q Consensus 334 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~ 413 (567)
++++++.||+||++..++........ .......+|.|++++ .+.|+|.. ++++|.| ..|||+|+|+.++
T Consensus 4009 ~~~l~n~YG~TE~t~~~~~~~~~~~~-------~~~~~~~iG~p~~~~-~~~v~d~~-~~~~p~g--~~GEL~i~G~~v~ 4077 (4334)
T PRK05691 4009 QIGLVNAYGPAECSDDVAFFRVDLAS-------TRGSYLPIGSPTDNN-RLYLLDEA-LELVPLG--AVGELCVAGTGVG 4077 (4334)
T ss_pred CCeEEeCccCccceeEEEEEEccccc-------ccCCcCCCCCccCCC-EEEEECCC-CCCCCCC--CceEEEEeccccc
Confidence 78999999999998766544322110 111234689999999 89999976 8999998 8999999999999
Q ss_pred ccccCCCccchhcc--------cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEE
Q 008389 414 KGYLKNPKANEETF--------ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVA 485 (567)
Q Consensus 414 ~gy~~~~~~~~~~~--------~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~ 485 (567)
+||+++++.+..+| .++||+|||+|++++||.++++||.|++||++|.+|.+.|||+.+.++|+|.+++|+.
T Consensus 4078 ~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~ 4157 (4334)
T PRK05691 4078 RGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAV 4157 (4334)
T ss_pred ccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEE
Confidence 99999999999998 2469999999999999999999999999999999999999999999999999988865
Q ss_pred eecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 486 RADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
.. ...++.++++++...+.. ......++++.+++++||+|++|..+++++ ||+|+|||++|++|++.
T Consensus 4158 ~~-~~~~~~l~a~~~~~~~~~--~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4158 QE-GVNGKHLVGYLVPHQTVL--AQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred ec-CCCCcEEEEEEeCCcccc--cchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 54 344678999998765531 222334678999999999999999999887 99999999999999865
No 103
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-62 Score=503.35 Aligned_cols=450 Identities=23% Similarity=0.293 Sum_probs=380.8
Q ss_pred HHHHH-hhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeec
Q 008389 22 PLWFL-DRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 22 ~~~~l-~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i 100 (567)
+.+.+ .++++++|+++|+++.++.+||.||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|+
T Consensus 4 ~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~ 83 (458)
T PRK09029 4 FSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPL 83 (458)
T ss_pred hhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeec
Confidence 33333 56688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHh
Q 008389 101 NIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQ 180 (567)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (567)
++..+.+++..+++.+++++++++.+.... .. +. .. ....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~----~~----------~~-~~~~------------------------ 123 (458)
T PRK09029 84 NPQLPQPLLEELLPSLTLDFALVLEGENTF-SA----LT----------SL-HLQL------------------------ 123 (458)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcccch-hh----cc----------cc-cccc------------------------
Confidence 999999999999999999999988765321 00 00 00 0000
Q ss_pred cCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhh
Q 008389 181 TGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAAL 260 (567)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~ 260 (567)
.. ........++++++++|||||||.||+|.++|+++..........+++..+++++..+|++|.+|+...+..+..
T Consensus 124 -~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~ 200 (458)
T PRK09029 124 -VE--GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYA 200 (458)
T ss_pred -cc--ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhC
Confidence 00 001112456789999999999999999999999999998888888899999999999999999998766666777
Q ss_pred cCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeec
Q 008389 261 CGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHT 340 (567)
Q Consensus 261 g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~ 340 (567)
|+++++.+. ..+++.+ .++|.+..+|+++..+...... ..++|.+++||+++++.+.+.+.+.+.++++.
T Consensus 201 G~~v~~~~~---~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~ 270 (458)
T PRK09029 201 GATLVVRDK---QPLEQAL--AGCTHASLVPTQLWRLLDNRSE-----PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCG 270 (458)
T ss_pred CceEEeCCh---HHHHHHH--hhceeeecChHHHHHHHhcccc-----CCcceEEEECCCCCCHHHHHHHHHcCCcEecc
Confidence 777666543 4566777 3799999999999999876443 34689999999999999999998889999999
Q ss_pred cCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCC
Q 008389 341 YGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNP 420 (567)
Q Consensus 341 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~ 420 (567)
||+||++........ ....++|.|++++ .++|.+ |||+++|+.++.||++++
T Consensus 271 YG~tE~~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~ 322 (458)
T PRK09029 271 YGLTEMASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQG 322 (458)
T ss_pred ccccccCcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCc
Confidence 999999764432110 1124589999999 788864 899999999999999998
Q ss_pred ccchhcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEE
Q 008389 421 KANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVT 500 (567)
Q Consensus 421 ~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~ 500 (567)
+.+.....+|||+|||+|+++ ||.+++.||++|+|+++|.+|+|.+||+.+.++|+|.+++|++.+++..|+.++++|+
T Consensus 323 ~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~ 401 (458)
T PRK09029 323 QLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVE 401 (458)
T ss_pred cccccccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEE
Confidence 887666678999999999999 9999999999999999999999999999999999999999999999988999999998
Q ss_pred EcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcC
Q 008389 501 LKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMG 560 (567)
Q Consensus 501 ~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~ 560 (567)
...+ .+. ++++++++++|+.|++|..+.+++ +|+|++||++|+.|+++++...
T Consensus 402 ~~~~---~~~----~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 402 SDSE---AAV----VNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred cCcc---cCH----HHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhcc
Confidence 6632 223 688999999999999999999888 9999999999999999988654
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-61 Score=504.14 Aligned_cols=494 Identities=26% Similarity=0.384 Sum_probs=402.3
Q ss_pred HhhhhhcCCCceeEEE--CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc
Q 008389 26 LDRAATVHPTRTSVVH--GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR 103 (567)
Q Consensus 26 l~~~a~~~p~~~a~~~--~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~ 103 (567)
....++++|+++|+++ .++.+||+||.+++.++|+.|.+.|+++|++|+++++++++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3467889999999987 46889999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCC
Q 008389 104 LNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGD 183 (567)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 183 (567)
++.+.+.++++.++++.++++........+...... .....+.+...... .....+.+.+....
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 146 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCP-------GVRHRLVLDGDGEL---------EGFVGYAEAVAGLP 146 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCC-------CceEEEEecCCCCC---------cccccHHHHhcCCC
Confidence 999999999999999999999877665544433222 22233333321110 11122333333211
Q ss_pred CCCCCCCCCCcCceEEEEecCCCCCCCCeeeec--cHHHHH---HHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 184 PQFDWKPPQDEWQSIALGYTSGTTASPKGVVLS--HRGAYL---MSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 184 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t--~~~l~~---~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
. ....+.++.++++|||||||.||+|.++ |.++.. ........+++..++++++..|++|.+++...+..+
T Consensus 147 ~----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~ 222 (511)
T PRK13391 147 A----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVI 222 (511)
T ss_pred C----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHH
Confidence 1 1112345678999999999999999964 555432 223344556788899999999999999998888888
Q ss_pred hhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHHHHh-cCC
Q 008389 259 ALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGF 335 (567)
Q Consensus 259 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~ 335 (567)
..|+++++...+++..+++.++++++|++.++|+++..+.+.... .... ++++|.+++||+++++++.+.+.+ ++.
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~-~~~l~~~~~gg~~~~~~~~~~~~~~~g~ 301 (511)
T PRK13391 223 RLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYD-LSSLEVAIHAAAPCPPQVKEQMIDWWGP 301 (511)
T ss_pred HcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCC-ccceeEEEEccCCCCHHHHHHHHHHcCC
Confidence 999999988888999999999999999999999999988865322 1223 789999999999999999999986 488
Q ss_pred eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccc
Q 008389 336 HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKG 415 (567)
Q Consensus 336 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~g 415 (567)
.+++.||+||++++...... . .....+.+|.|+++. ++|+|.+ +.+++.| +.|||+++|+ ++.|
T Consensus 302 ~v~~~YG~tE~~~~~~~~~~--~--------~~~~~~~vG~~~~g~--~~i~d~~-~~~~~~g--~~Gel~~~g~-~~~g 365 (511)
T PRK13391 302 IIHEYYAATEGLGFTACDSE--E--------WLAHPGTVGRAMFGD--LHILDDD-GAELPPG--EPGTIWFEGG-RPFE 365 (511)
T ss_pred ceeeeeccccccceEEecCc--c--------ccccCCCcCCcccce--EEEECCC-CCCCCCC--CceEEEEecC-cceE
Confidence 99999999999765443211 0 112236789999984 7889876 8888887 7899999999 8889
Q ss_pred ccCCCccchhccc--CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCC
Q 008389 416 YLKNPKANEETFA--NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGE 493 (567)
Q Consensus 416 y~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~ 493 (567)
|+++++.+...|. ++||+|||+|+++++|.+++.||.+|+++++|.++++.+||+++.+++.|.+++|++.++...|+
T Consensus 366 y~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~ 445 (511)
T PRK13391 366 YLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGE 445 (511)
T ss_pred EcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCc
Confidence 9999988877764 48999999999999999999999999999999999999999999999999999999999988889
Q ss_pred cceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 494 SPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 494 ~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
.++++++..++. ..+ +.+.++++++++++++.++.|..+.+++ +|+|++||++|+.|++.+..
T Consensus 446 ~~~~~~~~~~~~-~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 446 EVKAVVQPVDGV-DPG-PALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eeEEEEEECCCC-Ccc-cchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 999999877654 211 2234789999999999999999999887 99999999999999998864
No 105
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-61 Score=533.20 Aligned_cols=491 Identities=16% Similarity=0.185 Sum_probs=379.0
Q ss_pred hcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 17 YMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 17 ~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
...+|+.++|+++++++||++|+++.++++||+||+++++++|+.|.+.|+++||+|+|+++|++++++++|||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYE 176 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
++|++|. .++.++++.++++++|++.+..+.+.. ....++.++...... ...........++
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~-------------~~~~iiv~~~~~~~~--~~~~~~~~~~~~~ 585 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQ-------------LPGRVLVLGGGESRD--LDLPDDADVIDME 585 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHh-------------cCceEEEecCCcccc--ccCCcchhhhhhh
Confidence 9999985 678999999999999998776554322 123455554321100 0000000011111
Q ss_pred HHHhcCCCCCCC--CCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHH
Q 008389 177 KFLQTGDPQFDW--KPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYT 254 (567)
Q Consensus 177 ~~l~~~~~~~~~--~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 254 (567)
+..........+ ..+..++++++|+|| ||||.||++.++|.++..........+++..+|++++.+|++|.+|+...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~ 664 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVS 664 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHH
Confidence 111110000000 112235789999998 68888888888887766555455556788999999999999999999887
Q ss_pred HHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc
Q 008389 255 WSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK 333 (567)
Q Consensus 255 ~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~ 333 (567)
+..++.+|+.+++ ..+++..+++.|+++++|++.++|+++..|++........ ++++|.++ |+.+++++.+.+.+.
T Consensus 665 l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~-~~slr~~~--g~gl~~~l~~~~~~~ 741 (994)
T PRK07868 665 LGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHG-NHPVRLFI--GSGMPTGLWERVVEA 741 (994)
T ss_pred HHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCC-CCceEEEe--cCCCCHHHHHHHHHH
Confidence 7777787776665 5689999999999999999999999999998764332223 67888765 345999999998864
Q ss_pred -C-CeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEe--eC--------CCC--CccCCCC
Q 008389 334 -G-FHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVI--DT--------RTQ--QPVPADG 399 (567)
Q Consensus 334 -~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~--d~--------~~~--~~~~~~~ 399 (567)
+ +++++.||+||++...... . ....+++|+|+|++..++|. |+ +.| +.++.|
T Consensus 742 ~~~~~l~~~YG~TE~~~~~~~~---~----------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~g- 807 (994)
T PRK07868 742 FAPAHVVEFFATTDGQAVLANV---S----------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVN- 807 (994)
T ss_pred hCchheeeeeeccccccccccc---C----------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCC-
Confidence 4 7899999999976433211 0 02346899999997445543 21 224 445556
Q ss_pred CceEEEEEecccccccccCCCccch--hcc--cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcC
Q 008389 400 KTIGEIVMSGNVVMKGYLKNPKANE--ETF--ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLH 475 (567)
Q Consensus 400 ~~~Gei~v~~~~~~~gy~~~~~~~~--~~~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (567)
+.|||+++++... ++..+. ..| .+|||+|||+|++|+||+|+++||.||+||++|.+|+|.|||++|.+|
T Consensus 808 -e~Gel~~~~~~~~-----~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~h 881 (994)
T PRK07868 808 -EVGVLLARARGPI-----DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRI 881 (994)
T ss_pred -CceEEEEecCCCC-----ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcC
Confidence 7899999987532 232221 123 379999999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHH
Q 008389 476 PAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRA 554 (567)
Q Consensus 476 ~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~ 554 (567)
|+|.+++|++.+++. ++.++++|+++++. ..+. ++|++++++ ++.|++|+.|++++ ||+|++||++|++|++
T Consensus 882 p~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~-~~~~----~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~ 954 (994)
T PRK07868 882 GGVDLAVTYGVEVGG-RQLAVAAVTLRPGA-AITA----ADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRA 954 (994)
T ss_pred CCeeEEEEEeecCCC-CceEEEEEEeCCCC-cCCH----HHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHh
Confidence 999999999998875 68899999988765 4445 678888886 99999999999988 9999999999999987
Q ss_pred HH
Q 008389 555 KA 556 (567)
Q Consensus 555 ~~ 556 (567)
..
T Consensus 955 ~~ 956 (994)
T PRK07868 955 AG 956 (994)
T ss_pred cC
Confidence 64
No 106
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-61 Score=514.47 Aligned_cols=497 Identities=16% Similarity=0.153 Sum_probs=375.4
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECC------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGS------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
..|+.++|+++++++||++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 48 ~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 127 (624)
T PRK12582 48 PRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQ 127 (624)
T ss_pred ccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 6789999999999999999998753 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCCh-----HHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 93 AGAVLNAVNIRLNA-----PTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 93 ~G~~~v~i~~~~~~-----~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
+|++++|++|.++. +++.++++.++++++|++.... .......+.. ....++.+.....
T Consensus 128 ~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~------~~~~~i~~~~~~~-------- 191 (624)
T PRK12582 128 AGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP--FARALAALDL------LDVTVVHVTGPGE-------- 191 (624)
T ss_pred cCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH--HHHHHHhhhh------cCceEEEEcCCCc--------
Confidence 99999999999885 8999999999999999976421 1111111110 1122344332110
Q ss_pred cCCChHHHHHHHhcCCCCC-C-CCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCC---CcEEEEe
Q 008389 168 LGRGAVEYEKFLQTGDPQF-D-WKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNE---GAVYLWT 242 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~---~d~~~~~ 242 (567)
......+.++........ . ......++++++|+|||||||.||+|.+||+++..+.......+.... .++++..
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 270 (624)
T PRK12582 192 -GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDW 270 (624)
T ss_pred -ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEe
Confidence 112234555544322110 0 011245688999999999999999999999999887766655554443 5799999
Q ss_pred cCccchhhhHHHHHH-hhhcCeeEEec-cCC---HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCC----cCCCCchh
Q 008389 243 LPMFHCNGWCYTWSL-AALCGTSICLR-QVT---AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDT----ILPLPHVV 313 (567)
Q Consensus 243 ~p~~~~~g~~~~~~~-~~~g~~~~~~~-~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~----~~~l~~lr 313 (567)
+|++|.+|+...+.. +..|+++++.. .++ ...+++.++++++|++.++|+++..|++...... .. ++++|
T Consensus 271 lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~-~~slr 349 (624)
T PRK12582 271 MPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSF-FKNLR 349 (624)
T ss_pred chHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHH-hhhee
Confidence 999999998765554 45566665543 233 3456788899999999999999999876432211 12 67899
Q ss_pred hhhccCCCCCHHHHHHHHhc-------CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeE
Q 008389 314 HVNTAGAAPPPSVLHAMSQK-------GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDV 386 (567)
Q Consensus 314 ~i~~~G~~l~~~~~~~~~~~-------~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i 386 (567)
.+++||+++++++.+++.+. ++++++.||+||+++++...... ....+++|.|+|++ +++|
T Consensus 350 ~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~i 417 (624)
T PRK12582 350 LMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPGV-ELKL 417 (624)
T ss_pred EEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCCc-EEEE
Confidence 99999999999999998864 36899999999997655422110 12347899999999 7888
Q ss_pred eeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEE-e---CCCcEEEeccccceee-eCc
Q 008389 387 IDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVK-H---PDNYIEIKDRSKDIII-SGG 460 (567)
Q Consensus 387 ~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~-~---~~g~l~~~GR~~d~i~-~~G 460 (567)
++. | +.|||+++|++++.|||++++.+.+.| .+|||+|||+|++ + ++|++++.||.+|+|+ .+|
T Consensus 418 ~~~--------G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G 487 (624)
T PRK12582 418 APV--------G--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTG 487 (624)
T ss_pred ccC--------C--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCC
Confidence 642 3 689999999999999999999998888 5899999999998 4 4699999999999999 689
Q ss_pred eecchHHHH--HHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCc------c-------chhhHHHHHHHH---HHHH
Q 008389 461 ENISSVEVE--NMMYLHPAVLEASVVARADERWGESPCAFVTLKPEV------D-------KSNEQQLAEDIM---KFCR 522 (567)
Q Consensus 461 ~~v~~~~iE--~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~------~-------~~~~~~~~~~l~---~~l~ 522 (567)
++|+|.+|| .++.++|.|.+++|++.+++. +.++|++.... . ..+.+++.+.++ +..+
T Consensus 488 ~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~----~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 563 (624)
T PRK12582 488 TWVSVGTLRPDAVAACSPVIHDAVVAGQDRAF----IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHN 563 (624)
T ss_pred cEechHHHHHHHHHhcCcchheEEEEcCCCCc----EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHH
Confidence 999998885 678899999999999998776 44554432211 0 012223333333 3334
Q ss_pred hcCCCCC-CCceeecCc-cc------CCCCccccHHHHHHHHHHc
Q 008389 523 AKMPAYW-VPKSIVFGP-LP------KTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 523 ~~l~~~~-~p~~i~~~~-lP------~t~~GKi~r~~l~~~~~~~ 559 (567)
+.++.+. +|..+.+.+ .| +|++||++|+...+.|.+.
T Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~ 608 (624)
T PRK12582 564 AEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAAL 608 (624)
T ss_pred hhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHH
Confidence 4577777 999988776 65 5678889999998888764
No 107
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.7e-61 Score=499.99 Aligned_cols=484 Identities=27% Similarity=0.375 Sum_probs=396.2
Q ss_pred eeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhcc
Q 008389 37 TSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHS 116 (567)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~ 116 (567)
.++.+.++.+||.||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++.++++.+
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45666789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCCCCCCCCCCcCc
Q 008389 117 ASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQ 196 (567)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 196 (567)
++++++++....+.+.+....... ....++..... ......+.+........ .....++
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~~~~~~~ 141 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA------GVPLLLVVAGP-----------VPGFRSYEEALAAQPDT----PIADETA 141 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc------cccEEEEeCCC-----------CCccccHHHHHhcCCCC----CCCCCCc
Confidence 999999998776655543322210 12223332211 01223444444332211 1234567
Q ss_pred eEEEEecCCCCCCCCeeeeccHHHHHHHH------HHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccC
Q 008389 197 SIALGYTSGTTASPKGVVLSHRGAYLMSL------SVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQV 270 (567)
Q Consensus 197 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~------~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~ 270 (567)
.++++|||||||.||+|.++|.++..... ..........++++++..|++|..++...+.+...|+++++.+.+
T Consensus 142 ~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~ 221 (502)
T PRK08276 142 GADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKF 221 (502)
T ss_pred ceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCC
Confidence 89999999999999999999877543321 111122235678999999999999988888888888888888788
Q ss_pred CHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC--CCcCCCCchhhhhccCCCCCHHHHHHHHhc-CCeeeeccCCccCc
Q 008389 271 TAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE--DTILPLPHVVHVNTAGAAPPPSVLHAMSQK-GFHVTHTYGLSETY 347 (567)
Q Consensus 271 ~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~~~i~~~YG~tE~~ 347 (567)
++..+++.++++++|++.++|+++..+++.... ...+ ++++|.++++|++++.++.+++.+. +.++++.||+||++
T Consensus 222 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~ 300 (502)
T PRK08276 222 DAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYD-VSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGG 300 (502)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCC-cccceEEEecCCCCCHHHHHHHHHHhCcHhhhhccccccc
Confidence 999999999999999999999999999876532 2233 7899999999999999999999864 88899999999998
Q ss_pred CCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc
Q 008389 348 GPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF 427 (567)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~ 427 (567)
+++...... .....+.+|.|+ ++ .++|+|++ +.+++.+ +.|||+++|+.++.||+++++.+...|
T Consensus 301 ~~~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~ 365 (502)
T PRK08276 301 GVTVITSED----------WLAHPGSVGKAV-LG-EVRILDED-GNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAAR 365 (502)
T ss_pred ceeEecCcc----------ccccCCCcceec-cc-EEEEECCC-CCCCcCC--CceEEEEECCCccchhcCCHHHHHHHh
Confidence 755432211 112236789999 77 79999965 8888877 789999999999999999999888888
Q ss_pred cC-CccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCcc
Q 008389 428 AN-GWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVD 506 (567)
Q Consensus 428 ~~-g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 506 (567)
.+ +||+|||+|+++++|.+++.||.+|+++++|.++++.+||..+.++|+|.++++++..++..++.++++++.+++..
T Consensus 366 ~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 445 (502)
T PRK08276 366 NPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGAD 445 (502)
T ss_pred cCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCC
Confidence 55 99999999999999999999999999999999999999999999999999999999999888899999999887642
Q ss_pred chhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHc
Q 008389 507 KSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 507 ~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~ 559 (567)
. .+.+.+++++.++++++.++.|..+++++ +|+|++||++|+.|++.+.+.
T Consensus 446 -~-~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 446 -A-GDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred -C-ChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 1 22334688999999999999999999888 999999999999999998765
No 108
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.2e-61 Score=602.05 Aligned_cols=491 Identities=19% Similarity=0.255 Sum_probs=414.0
Q ss_pred cccchhhhcccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHh
Q 008389 10 LPKNAANYMALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFG 89 (567)
Q Consensus 10 ~~~~~~~~~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 89 (567)
|.......++.++.++|++++..+|+++|+++.++++||+||.+++.++|+.|.+.|+++|++|++++++++++++++||
T Consensus 1121 ~~~~~~~~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~la 1200 (4334)
T PRK05691 1121 WGQAPCAPAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLA 1200 (4334)
T ss_pred ccCCCCCCccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 33333444567899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccC
Q 008389 90 VPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALG 169 (567)
Q Consensus 90 ~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (567)
|+++|++++|++|.++.+++.++++.++++++|++......+... .....+.++....
T Consensus 1201 ilkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~~~~~---------- 1258 (4334)
T PRK05691 1201 ILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA------------EGVSAIALDSLHL---------- 1258 (4334)
T ss_pred HHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc------------cCceEEeeccccc----------
Confidence 999999999999999999999999999999999987654332110 0111222211100
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchh
Q 008389 170 RGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCN 249 (567)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 249 (567)
...+...+.....++++++++|||||||.||||.++|+++.+.+.+....++++++|+++...|++|..
T Consensus 1259 -----------~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~ 1327 (4334)
T PRK05691 1259 -----------DSWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDV 1327 (4334)
T ss_pred -----------cccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHH
Confidence 000001111234568999999999999999999999999999998888889999999999999999988
Q ss_pred hhHHHHHHhhhcCeeEEec---cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHH
Q 008389 250 GWCYTWSLAALCGTSICLR---QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSV 326 (567)
Q Consensus 250 g~~~~~~~~~~g~~~~~~~---~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~ 326 (567)
++...+.+++.|+++++.. ..++..+++.++++++|++.++|++++.+....... . ++++|.+++|||++++++
T Consensus 1328 s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~--~-~~~lr~~~~gGe~l~~~~ 1404 (4334)
T PRK05691 1328 SVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLAA--A-CTSLRRLFSGGEALPAEL 1404 (4334)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcccc--c-CCcccEEEEeecCCCHHH
Confidence 8888888889999998874 368899999999999999999999999998653322 2 789999999999999999
Q ss_pred HHHHHhc--CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEE
Q 008389 327 LHAMSQK--GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGE 404 (567)
Q Consensus 327 ~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 404 (567)
.+.+.+. ++++++.||+||++..++....... ......+|.|++++ .+.|+|++ ++++|.| +.||
T Consensus 1405 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~---------~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~G--~~GE 1471 (4334)
T PRK05691 1405 RNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAE---------DGERSPIGRPLGNV-LCRVLDAE-LNLLPPG--VAGE 1471 (4334)
T ss_pred HHHHHHhCCCcEEEeCCCcChheeeeeeeecccc---------cCCCCcccceeCCC-EEEEECCC-CCCCCCC--CceE
Confidence 9999854 6899999999999765543221110 11235789999999 89999987 8999998 8999
Q ss_pred EEEecccccccccCCCccchhccc--------CCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCC
Q 008389 405 IVMSGNVVMKGYLKNPKANEETFA--------NGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHP 476 (567)
Q Consensus 405 i~v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 476 (567)
|+|+|+.+++||+++++.+...|. .+||+|||+|++++||.++++||.|++||++|.+|+|.|||.+|.++|
T Consensus 1472 L~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~ 1551 (4334)
T PRK05691 1472 LCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQP 1551 (4334)
T ss_pred EEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCC
Confidence 999999999999999999998883 249999999999999999999999999999999999999999999999
Q ss_pred CceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHH
Q 008389 477 AVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAK 555 (567)
Q Consensus 477 ~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~ 555 (567)
+|.+++|++..+.. +..++++++...+. ..+. ++++++++++||.|++|..+++++ +|+|++||++|++|++.
T Consensus 1552 ~V~~a~v~~~~~~~-~~~lva~~~~~~~~-~~~~----~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1552 GVAQAAVLVREGAA-GAQLVGYYTGEAGQ-EAEA----ERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred CcceEEEEEeeCCC-CCEEEEEEEeCCCC-CCCH----HHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 99999998766543 57899999876654 3333 589999999999999999999888 99999999999999764
No 109
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.9e-60 Score=542.85 Aligned_cols=498 Identities=21% Similarity=0.217 Sum_probs=397.4
Q ss_pred ccCHHHHHhhhhhcCC-CceeEEE-CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 19 ALTPLWFLDRAATVHP-TRTSVVH-GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p-~~~a~~~-~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
+.++.+.+.+.++++| ++.|+.+ .++++||+||+++++++|+.|++ |+++||+|+++++|+++++++++||+++|++
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 708 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRV 708 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCE
Confidence 5788889988888886 5677776 36899999999999999999975 9999999999999999999999999999999
Q ss_pred eeeccccCChHHHHHHHhccCceEEEEcccchHHHH--HHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHH
Q 008389 97 LNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAE--EALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVE 174 (567)
Q Consensus 97 ~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (567)
++|+++..+.+++.++++++++++++++++..+... .....+. ....++.+++..... .....
T Consensus 709 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~--------~~~~~ 773 (1140)
T PRK06814 709 PAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE-------FGIRIIYLEDVRAQI--------GLADK 773 (1140)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc-------cCceEEEehHhhccC--------ChHHH
Confidence 999999999999999999999999999876544321 1111111 223444444321000 00111
Q ss_pred HHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH-
Q 008389 175 YEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY- 253 (567)
Q Consensus 175 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~- 253 (567)
+.+......+.. ......++++++++|||||||.||+|.++|+++.++.......++++++|++++.+|++|..|+..
T Consensus 774 ~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 852 (1140)
T PRK06814 774 IKGLLAGRFPLV-YFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGG 852 (1140)
T ss_pred HHHHhhccCCcc-ccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHH
Confidence 222222221111 111346789999999999999999999999999998888888889999999999999999999854
Q ss_pred HHHHhhhcCeeEEecc-CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh
Q 008389 254 TWSLAALCGTSICLRQ-VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ 332 (567)
Q Consensus 254 ~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~ 332 (567)
.+..+..|++.++.+. .+...+.+.++++++|++.++|++++.+.+... ..+ ++++|.+++||+++++++.+.+.+
T Consensus 853 ~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~-~~~lr~v~~gg~~l~~~~~~~~~~ 929 (1140)
T PRK06814 853 LVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH--PYD-FRSLRYVFAGAEKVKEETRQTWME 929 (1140)
T ss_pred HHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc--ccc-ccceeEEEEcCCcCCHHHHHHHHH
Confidence 4445566777766653 567788999999999999999999999887532 223 789999999999999999999885
Q ss_pred -cCCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccc
Q 008389 333 -KGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNV 411 (567)
Q Consensus 333 -~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~ 411 (567)
.++++++.||+||++..+..+... ....+++|.|+|++ ++++.+.+ + .+ +.|||+++|++
T Consensus 930 ~~~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~-~----~~--~~Gel~v~g~~ 990 (1140)
T PRK06814 930 KFGIRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVP-G----ID--EGGRLFVRGPN 990 (1140)
T ss_pred HhCCcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecC-C----CC--CceEEEEeCCC
Confidence 489999999999998765443211 11246899999999 79887754 2 12 67999999999
Q ss_pred ccccccCCCccch-hcccCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCC
Q 008389 412 VMKGYLKNPKANE-ETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADER 490 (567)
Q Consensus 412 ~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~ 490 (567)
++.||+++++... ..+.+|||+|||+|++|+||++++.||.||+||++|++|+|.|||+.+.+++.+.+++|++.+++.
T Consensus 991 ~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~ 1070 (1140)
T PRK06814 991 VMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDAR 1070 (1140)
T ss_pred cchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCC
Confidence 9999998765332 223689999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCcceEEEEEcCCccchhhHHHHHHHHHHHHhc-CCCCCCCceeecCc-ccCCCCccccHHHHHHHHHHcCCcc
Q 008389 491 WGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAK-MPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKEMGPVR 563 (567)
Q Consensus 491 ~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~~~~~~ 563 (567)
.|+.+++++. .. +.+. ++++++++++ ++++++|..+.+++ +|+|++||++|++|+++..+....+
T Consensus 1071 ~g~~~~~~~~-~~---~~~~----~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~ 1137 (1140)
T PRK06814 1071 KGERIILLTT-AS---DATR----AAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAAKP 1137 (1140)
T ss_pred CCceEEEEEc-CC---CcCH----HHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhccc
Confidence 8888777654 11 2233 5777888864 99999999999888 9999999999999999988875544
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-61 Score=507.75 Aligned_cols=508 Identities=20% Similarity=0.246 Sum_probs=376.3
Q ss_pred cCHHHHHhhhhhcCCCceeEEECC---------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhh
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGS---------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGV 90 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~ 90 (567)
|++.++|++++..+|+++|+++.+ +++||+||..++.++|+.|.+.| .+||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 478899999999999999998642 68999999999999999999999 68999999999999999999999
Q ss_pred hhcCCeeeeccc---cCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhc
Q 008389 91 PMAGAVLNAVNI---RLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYA 167 (567)
Q Consensus 91 ~~~G~~~v~i~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (567)
+++|++++|+++ ..+.+++.++++.+++++++++++..+.+......... .....++.++....
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-------- 146 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPG-----QSAPPVIEVDLLDL-------- 146 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhccc-----ccccceEeeccccc--------
Confidence 999999999997 45788999999999999999998876655443211110 01112222221100
Q ss_pred cCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH-hc-----cCCCcEEEE
Q 008389 168 LGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI-WG-----MNEGAVYLW 241 (567)
Q Consensus 168 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~-----~~~~d~~~~ 241 (567)
... .. ........+++++++|||||||.||+|.++|++++.++...... +. ...++++++
T Consensus 147 -----------~~~-~~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (578)
T PRK05850 147 -----------DSP-RG--SDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVS 212 (578)
T ss_pred -----------ccC-Cc--cccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEE
Confidence 000 00 01122456899999999999999999999999998877665443 22 356889999
Q ss_pred ecCccchhhhHHH-HHHhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHH-cCCCC---CCcCCCCch
Q 008389 242 TLPMFHCNGWCYT-WSLAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIV-NAPSE---DTILPLPHV 312 (567)
Q Consensus 242 ~~p~~~~~g~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~-~~~~~---~~~~~l~~l 312 (567)
.+|++|..|+... +.++..|+++++..+ .++..+++.++++++++. .+|.++..+. ..... .... ++++
T Consensus 213 ~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~-~~~l 290 (578)
T PRK05850 213 WLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLD-LGGV 290 (578)
T ss_pred ECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcc-hhhh
Confidence 9999999998754 445566777666653 278999999999999865 5666544333 22111 1223 6789
Q ss_pred hhhhccCCCCCHHHHHHHHhc----C---CeeeeccCCccCcCCcccccCCCCCC--CCChhhh------------hhhh
Q 008389 313 VHVNTAGAAPPPSVLHAMSQK----G---FHVTHTYGLSETYGPSTVCAWKPEWD--SLPPETQ------------ARMK 371 (567)
Q Consensus 313 r~i~~~G~~l~~~~~~~~~~~----~---~~i~~~YG~tE~~~~~~~~~~~~~~~--~~~~~~~------------~~~~ 371 (567)
|.+++||+++++++.+++.+. + ..+++.||+||++..+.......... ....... ....
T Consensus 291 r~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 370 (578)
T PRK05850 291 LGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPL 370 (578)
T ss_pred eeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceE
Confidence 999999999999999888743 2 36899999999865443321110000 0000000 0011
Q ss_pred ccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhccc------------CCccccCceEE
Q 008389 372 ARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFA------------NGWYHTGDLGV 439 (567)
Q Consensus 372 ~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~------------~g~~~TGDl~~ 439 (567)
..+|.|. +. +++|+|++++.+++.| +.|||+++|+.++.||+++++.+...|. +|||+|||+|+
T Consensus 371 ~~~g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~ 446 (578)
T PRK05850 371 VSYGSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGF 446 (578)
T ss_pred EeccCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceee
Confidence 2334432 34 7899998878889888 8999999999999999999999998883 47999999999
Q ss_pred EeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhH--HHHHHH
Q 008389 440 KHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQ--QLAEDI 517 (567)
Q Consensus 440 ~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~--~~~~~l 517 (567)
++ +|++++.||.+|+|+++|++|+|.+||+++.+++.+ +++|+++++. .++.++++|+++++. ..+.+ .....+
T Consensus 447 ~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~-~~~~~~~~~~~~l 522 (578)
T PRK05850 447 IS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRG-DSDEEAMDRLRTV 522 (578)
T ss_pred EE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEecccc-CcchhhhhhHHHH
Confidence 98 999999999999999999999999999999999985 5788888876 578899999988764 22221 123455
Q ss_pred HHHHHhcCCC--CCCCceeecC---cccCCCCccccHHHHHHHHHHcCCcccc
Q 008389 518 MKFCRAKMPA--YWVPKSIVFG---PLPKTATGKIQKHVLRAKAKEMGPVRKS 565 (567)
Q Consensus 518 ~~~l~~~l~~--~~~p~~i~~~---~lP~t~~GKi~r~~l~~~~~~~~~~~~~ 565 (567)
++.+.+.++. ...|..+.++ .||+|++||++|++|+++|.+...++..
T Consensus 523 ~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~~~~ 575 (578)
T PRK05850 523 KREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFTRLD 575 (578)
T ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCccccc
Confidence 5555544432 2345555544 3999999999999999999988776653
No 111
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-61 Score=458.61 Aligned_cols=519 Identities=22% Similarity=0.267 Sum_probs=430.4
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECC-----------------------ccccHHHHHHHHHHHHHHHHHccCCCCCE-EE
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGS-----------------------TRYTWLQTYQRCRRLASALCKRSIGLGCT-VA 74 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~-----------------------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~-V~ 74 (567)
-.|+++++++..+.+.++.++.+++ .++||.|+..++.++|.+|.+.|++++++ ++
T Consensus 40 ~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~ 119 (678)
T KOG1180|consen 40 ASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIA 119 (678)
T ss_pred cccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 4899999999999999999997632 67999999999999999999999998777 99
Q ss_pred EEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEe
Q 008389 75 IIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVI 154 (567)
Q Consensus 75 l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 154 (567)
|++..+.+|+++++||++-+..+|-+...+..+.+.|-|++++++.+|++.+.++.+...++..+ ..+.+|.+
T Consensus 120 iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~-------~vk~II~~ 192 (678)
T KOG1180|consen 120 IFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK-------TVKHIIYF 192 (678)
T ss_pred EEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC-------ceeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999988777766666 67888888
Q ss_pred cCCCCCc--ccchh--ccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH
Q 008389 155 GDESCDP--KDLKY--ALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI 230 (567)
Q Consensus 155 ~~~~~~~--~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 230 (567)
++.+... ++... .......+|++++..+.....+..+..++|+|.|+|||||||.||||+++|.|+++........
T Consensus 193 d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~ 272 (678)
T KOG1180|consen 193 DPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGEN 272 (678)
T ss_pred cCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhccc
Confidence 7533222 22221 1245677899999998877666666688999999999999999999999999999999888776
Q ss_pred h-ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccCCHHH--------HHHHHHhhCceEeeeCcHHHHHHHcCC
Q 008389 231 W-GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKA--------VYSAIAKYGVTHFCAAPVVLNSIVNAP 301 (567)
Q Consensus 231 ~-~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~i~~~~~t~l~~~p~~~~~l~~~~ 301 (567)
. .+.+.|+++..+|+.|+..+.+-+.++..|+.+-+-++.+... ---.+..+|||++.++|..|+++.+..
T Consensus 273 v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgV 352 (678)
T KOG1180|consen 273 VPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGV 352 (678)
T ss_pred CcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHH
Confidence 6 6889999999999999999999999999999877764432211 112456789999999999998876421
Q ss_pred CCC-----------------------------------------CcCCCCchhhhhccCCCCCHHHHHHHHhc-CCeeee
Q 008389 302 SED-----------------------------------------TILPLPHVVHVNTAGAAPPPSVLHAMSQK-GFHVTH 339 (567)
Q Consensus 302 ~~~-----------------------------------------~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~~~i~~ 339 (567)
..+ +.....+||.+++||++++++..+.+.-. .|++.+
T Consensus 353 l~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~q 432 (678)
T KOG1180|consen 353 LSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQ 432 (678)
T ss_pred HHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccc
Confidence 110 00114588999999999999999999965 779999
Q ss_pred ccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCC
Q 008389 340 TYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKN 419 (567)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~ 419 (567)
+||.||+.+..+..... ....+.+|.|++.+ +++++|-+.+...+.+....|||+++|++++.||+++
T Consensus 433 GYGLTEtca~~tv~e~~-----------d~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn 500 (678)
T KOG1180|consen 433 GYGLTETCAAATVLEPE-----------DFSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKN 500 (678)
T ss_pred cccccchhcccEecChh-----------hcccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCC
Confidence 99999997776654321 23347899999999 8999998888888777656799999999999999999
Q ss_pred Cccchhcc--cCC--ccccCceEEEeCCCcEEEeccccceee-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCc
Q 008389 420 PKANEETF--ANG--WYHTGDLGVKHPDNYIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEASVVARADERWGES 494 (567)
Q Consensus 420 ~~~~~~~~--~~g--~~~TGDl~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 494 (567)
++.+.+.| .+| ||+|||+|++++||+|.+++|.+|.+| .+|+.|+.+.||.+++..|.|...+|.+..... .
T Consensus 501 ~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~s---~ 577 (678)
T KOG1180|consen 501 EEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNKS---K 577 (678)
T ss_pred hhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecccccc---e
Confidence 99999999 378 999999999999999999999999999 999999999999999999999999998887654 5
Q ss_pred ceEEEEEcCCcc----------chhh----------HHHHHHHHHHH-HhcCCCCCCCceeecCcccCC-------CCcc
Q 008389 495 PCAFVTLKPEVD----------KSNE----------QQLAEDIMKFC-RAKMPAYWVPKSIVFGPLPKT-------ATGK 546 (567)
Q Consensus 495 ~~~~v~~~~~~~----------~~~~----------~~~~~~l~~~l-~~~l~~~~~p~~i~~~~lP~t-------~~GK 546 (567)
++++||++.+.. ..+. .++.++|.+.- .++|....+|..|++.+.|=| ..=|
T Consensus 578 ~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT~A~K 657 (678)
T KOG1180|consen 578 PVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVTAALK 657 (678)
T ss_pred eEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccHHHHH
Confidence 999999986421 1011 23445555555 456999999999999886644 4569
Q ss_pred ccHHHHHHHHHHc
Q 008389 547 IQKHVLRAKAKEM 559 (567)
Q Consensus 547 i~r~~l~~~~~~~ 559 (567)
+.|+.+++.|++.
T Consensus 658 LKRk~I~~~~k~e 670 (678)
T KOG1180|consen 658 LKRKEILAAYKKE 670 (678)
T ss_pred hhHHHHHHHHHHH
Confidence 9999999998864
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.4e-60 Score=499.66 Aligned_cols=500 Identities=21% Similarity=0.265 Sum_probs=382.7
Q ss_pred cCHHHHHhhhhhcCCCceeEEECC---ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGS---TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~---~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
.|+.++|+..+..+|+..++...+ +.+||+||+.++.++|..|.++|+++||+|+++++|++++++++|||+++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 100 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLV 100 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCe
Confidence 589999999999988777654332 67999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCC-------hHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccC
Q 008389 97 LNAVNIRLN-------APTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALG 169 (567)
Q Consensus 97 ~v~i~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (567)
++|+++..+ .+++.++++.+++++++++.+..+.+.+.... ....+..
T Consensus 101 ~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~----------~~~~~~~--------------- 155 (579)
T PRK09192 101 PVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHG----------NPLLHVL--------------- 155 (579)
T ss_pred eEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcc----------cccccee---------------
Confidence 999976443 58899999999999999998766555443211 1111111
Q ss_pred CChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHH-HhccCCCcEEEEecCccch
Q 008389 170 RGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVAL-IWGMNEGAVYLWTLPMFHC 248 (567)
Q Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~d~~~~~~p~~~~ 248 (567)
.+.++....... .......++++++++|||||||.||+|.++|+++...+..... .+++.++|+++..+|++|.
T Consensus 156 ----~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 230 (579)
T PRK09192 156 ----SHAWFKALPEAD-VALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHD 230 (579)
T ss_pred ----ehhhhcccCCCc-cccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCc
Confidence 111111111111 1112245688999999999999999999999999988887777 7889999999999999999
Q ss_pred hhhHHHHHH-hhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCC---CCcCCCCchhhhhccCC
Q 008389 249 NGWCYTWSL-AALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSE---DTILPLPHVVHVNTAGA 320 (567)
Q Consensus 249 ~g~~~~~~~-~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~---~~~~~l~~lr~i~~~G~ 320 (567)
+|+...+.. +..|++.++... .++..+++.+.++++++++..|..+..+...... .... ++++|.+++||+
T Consensus 231 ~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~-l~~lr~~~~gG~ 309 (579)
T PRK09192 231 MGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELD-LSCWRVAGIGAD 309 (579)
T ss_pred chhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccc-hhhhheeEecCc
Confidence 998865655 445555555532 3688999999999999877755555544432211 1223 789999999999
Q ss_pred CCCHHHHHHHHhc----C---CeeeeccCCccCcCCcccccCCCCCC---------------CCC--hhhhhhhhccCCc
Q 008389 321 APPPSVLHAMSQK----G---FHVTHTYGLSETYGPSTVCAWKPEWD---------------SLP--PETQARMKARQGV 376 (567)
Q Consensus 321 ~l~~~~~~~~~~~----~---~~i~~~YG~tE~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~~~G~ 376 (567)
++++.+.+.+.+. + ..+++.||+||+++.++......... ..+ .........++|.
T Consensus 310 ~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ 389 (579)
T PRK09192 310 MIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGK 389 (579)
T ss_pred cCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCC
Confidence 9999999888754 2 24899999999976555432211100 000 0000011257899
Q ss_pred eeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc-cCCccccCceEEEeCCCcEEEeccccce
Q 008389 377 RFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF-ANGWYHTGDLGVKHPDNYIEIKDRSKDI 455 (567)
Q Consensus 377 ~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~ 455 (567)
++|++ .++|+|++ ++.++.+ +.|||+++|+.++.||+++ ..+...| .+|||+|||+|++ ++|+++++||.+|+
T Consensus 390 ~~p~~-~v~i~d~~-~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~ 463 (579)
T PRK09192 390 ALPGH-EIEIRNEA-GMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDL 463 (579)
T ss_pred cCCCc-EEEEECCC-CCCCCCC--CEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccE
Confidence 99999 89999976 7888877 8999999999999999999 4444444 6899999999999 89999999999999
Q ss_pred eeeCceecchHHHHHHHhcCCCce--eeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCC-CCCCCc
Q 008389 456 IISGGENISSVEVENMMYLHPAVL--EASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMP-AYWVPK 532 (567)
Q Consensus 456 i~~~G~~v~~~~iE~~l~~~~~i~--~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~-~~~~p~ 532 (567)
|+++|.+|+|.+||++|.++|+|. +++|++.+++. ++.++++++..++. ..+. .++.+++++.+. .+..|.
T Consensus 464 i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~-~~~~----~~l~~~~~~~l~~~~~~~~ 537 (579)
T PRK09192 464 IIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISD-EERR----GQLIHALAALVRSEFGVEA 537 (579)
T ss_pred EEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCC-hHHH----HHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999998 89999998875 55788887765543 3344 456666666653 466777
Q ss_pred eeecC---cccCCCCccccHHHHHHHHHHcCCc
Q 008389 533 SIVFG---PLPKTATGKIQKHVLRAKAKEMGPV 562 (567)
Q Consensus 533 ~i~~~---~lP~t~~GKi~r~~l~~~~~~~~~~ 562 (567)
.+.++ +||+|++||++|++|++++.++...
T Consensus 538 ~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~~ 570 (579)
T PRK09192 538 AVELVPPHSLPRTSSGKLSRAKAKKRYLSGAFA 570 (579)
T ss_pred eEEEeCCCCcCCCCCcchhHHHHHHHHHcCCCC
Confidence 66654 3999999999999999998887553
No 113
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.5e-60 Score=485.44 Aligned_cols=435 Identities=25% Similarity=0.400 Sum_probs=365.7
Q ss_pred cHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEccc
Q 008389 47 TWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQE 126 (567)
Q Consensus 47 Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (567)
||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+.+..++++++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred chHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCC
Q 008389 127 YFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGT 206 (567)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGt 206 (567)
...... ... .+..+................+++++++|||||
T Consensus 81 ~~~~~~-----------------~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 122 (436)
T TIGR01923 81 LEEKDF-----------------QAD---------------------SLDRIEAAGRYETSLSASFNMDQIATLMFTSGT 122 (436)
T ss_pred ccccce-----------------eec---------------------chHhhhhcccccccccccCCcCceEEEEeCCCC
Confidence 421000 000 001111111111111223456789999999999
Q ss_pred CCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceE
Q 008389 207 TASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTH 286 (567)
Q Consensus 207 TG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~ 286 (567)
||.||+|.++|+++...+......++++++|++++.+|++|.+++...+..+..|+++++...+ ..+++.++++++|+
T Consensus 123 TG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~ 200 (436)
T TIGR01923 123 TGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF--NQLLEMIANERVTH 200 (436)
T ss_pred CCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--HHHHHHHHHhCCeE
Confidence 9999999999999999988888889999999999999999999998777778888888777554 38999999999999
Q ss_pred eeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeeccCCccCcCCcccccCCCCCCCCChhh
Q 008389 287 FCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPET 366 (567)
Q Consensus 287 l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 366 (567)
+.++|+++..+++.... .+++|.++++|+++++++.+++...++++++.||+||+++.+........
T Consensus 201 ~~~~P~~l~~l~~~~~~-----~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~-------- 267 (436)
T TIGR01923 201 ISLVPTQLNRLLDEGGH-----NENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEML-------- 267 (436)
T ss_pred EEeHHHHHHHHHhCcCC-----CCceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCcccc--------
Confidence 99999999999886542 26789999999999999999988889999999999999776554321110
Q ss_pred hhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcE
Q 008389 367 QARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYI 446 (567)
Q Consensus 367 ~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l 446 (567)
.....+|.|++++ ++.+.+.+.+ +.|||+++|+.++.||+++++.+...+.+|||+|||+|++++||.+
T Consensus 268 --~~~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~ 336 (436)
T TIGR01923 268 --HARPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFL 336 (436)
T ss_pred --ccccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCE
Confidence 1112489999999 7888433211 5699999999999999998888777778899999999999999999
Q ss_pred EEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCC
Q 008389 447 EIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMP 526 (567)
Q Consensus 447 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~ 526 (567)
++.||.+|+|+++|.++++.+||+++.+++.|.+++|++.++...+..+.+++++.++. +. +++.+++++.++
T Consensus 337 ~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~---~~----~~l~~~l~~~l~ 409 (436)
T TIGR01923 337 YVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDI---SQ----AKLIAYLTEKLA 409 (436)
T ss_pred EEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCC---CH----HHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999998877778888998877643 23 678889999999
Q ss_pred CCCCCceeecCc-ccCCCCccccHHHH
Q 008389 527 AYWVPKSIVFGP-LPKTATGKIQKHVL 552 (567)
Q Consensus 527 ~~~~p~~i~~~~-lP~t~~GKi~r~~l 552 (567)
.+++|..+.+++ ||+|++||++|++|
T Consensus 410 ~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 410 KYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred CCCCCeEEEEecCCCCCCCCceecccC
Confidence 999999999888 99999999999865
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-58 Score=485.36 Aligned_cols=494 Identities=21% Similarity=0.242 Sum_probs=375.9
Q ss_pred CHHHHHhhhhhcCCCceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 21 TPLWFLDRAATVHPTRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 21 t~~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
++.+.|...+..+|+.+++...+ +.+||.||++++.++|..|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888889999999999997654 6899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChHHH-------HHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCC
Q 008389 99 AVNIRLNAPTI-------AFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRG 171 (567)
Q Consensus 99 ~i~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (567)
++++..+.+++ .++++.++++.+++++......... .. ....+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----~~------~~~~~-------------------- 132 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVL----EE------KGIRV-------------------- 132 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhh----cc------cCCce--------------------
Confidence 99988776544 4567888999999987654332211 00 00011
Q ss_pred hHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCC-cEEEEecCccchhh
Q 008389 172 AVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEG-AVYLWTLPMFHCNG 250 (567)
Q Consensus 172 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-d~~~~~~p~~~~~g 250 (567)
..+++++..... .......+++++++|||||||.||+|.++|+++...+......+++..+ |++++.+|++|..|
T Consensus 133 -~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 208 (545)
T PRK07768 133 -LTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMG 208 (545)
T ss_pred -eehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchH
Confidence 223333322111 1123456899999999999999999999999999888877777888876 89999999999999
Q ss_pred hHHHHH-HhhhcCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCC----CCCCcCCCCchhhhhccCCC
Q 008389 251 WCYTWS-LAALCGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAP----SEDTILPLPHVVHVNTAGAA 321 (567)
Q Consensus 251 ~~~~~~-~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~----~~~~~~~l~~lr~i~~~G~~ 321 (567)
+...+. ....|++.+...+ .++..+.+.+++++++++.+.|..+..+.... .....+ ++++|.++++|++
T Consensus 209 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~lr~~~~~g~~ 287 (545)
T PRK07768 209 MVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFD-LSSLRFALNGAEP 287 (545)
T ss_pred HHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCC-chheeeEEeccCC
Confidence 876554 4566666666643 36788999999999999887777766655432 111233 7899999999999
Q ss_pred CCHHHHHHHHh----cCC---eeeeccCCccCcCCcccccCCCCCC-------C-------CC-hhhhhhhhccCCceec
Q 008389 322 PPPSVLHAMSQ----KGF---HVTHTYGLSETYGPSTVCAWKPEWD-------S-------LP-PETQARMKARQGVRFI 379 (567)
Q Consensus 322 l~~~~~~~~~~----~~~---~i~~~YG~tE~~~~~~~~~~~~~~~-------~-------~~-~~~~~~~~~~~G~~~~ 379 (567)
++++..+++.+ ++. .+++.||+||++..++......... . .+ ..........+|.|++
T Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 367 (545)
T PRK07768 288 IDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLP 367 (545)
T ss_pred CCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCC
Confidence 99999998875 344 4999999999976554332211000 0 00 0001223468999999
Q ss_pred cccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCCcEEEeccccceeeeC
Q 008389 380 GLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDNYIEIKDRSKDIIISG 459 (567)
Q Consensus 380 ~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~ 459 (567)
++ .++|+|++ +++++.+ +.|||+++|+.++.||++.+......+.+|||+|||+|+++++|.++++||.+|+|+.+
T Consensus 368 g~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~ 443 (545)
T PRK07768 368 GL-EVRVVDED-GQVLPPR--GVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMA 443 (545)
T ss_pred CC-EEEEECCC-CCCCCCC--CEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEEC
Confidence 99 89999965 8888887 78999999999999999876655555578899999999999999999999999999999
Q ss_pred ceecchHHHHHHHhcCCCceeeEEEEee--cCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCC--CCCceee
Q 008389 460 GENISSVEVENMMYLHPAVLEASVVARA--DERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAY--WVPKSIV 535 (567)
Q Consensus 460 G~~v~~~~iE~~l~~~~~i~~~~v~~~~--~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~i~ 535 (567)
|.++++.+||..+.++|+|.+++|++.. +...++..+++++..+..+.... .++.+.+++.+.++ ..|..+.
T Consensus 444 G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~l~~~~~~~l~~~~~~~p~~v~ 519 (545)
T PRK07768 444 GRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEV----RRIRHQVAHEVVAEVGVRPRNVV 519 (545)
T ss_pred CEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccccHHHH----HHHHHHHHHHHHHHhCCCccEEE
Confidence 9999999999999999999998877654 33334555555554433322222 34555555554433 4677676
Q ss_pred cC---cccCCCCccccHHHHHHHHH
Q 008389 536 FG---PLPKTATGKIQKHVLRAKAK 557 (567)
Q Consensus 536 ~~---~lP~t~~GKi~r~~l~~~~~ 557 (567)
++ +||+|++||++|+.|++.|.
T Consensus 520 ~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 520 VLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred EeCCCcCCCCCchhHHHHHHHHhcC
Confidence 55 39999999999999998764
No 115
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-58 Score=464.23 Aligned_cols=406 Identities=18% Similarity=0.181 Sum_probs=348.4
Q ss_pred eEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccC
Q 008389 38 SVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSA 117 (567)
Q Consensus 38 a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~ 117 (567)
++++.++++||.||.++++++|+.|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46788899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCCCCCCCCCCcCce
Q 008389 118 SAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQS 197 (567)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 197 (567)
++.++++..... . .. .....++++
T Consensus 80 ~~~~i~~~~~~~---------------------~---~~--------------------------------~~~~~~~~~ 103 (414)
T PRK08308 80 CHGLLYGESDFT---------------------K---LE--------------------------------AVNYLAEEP 103 (414)
T ss_pred CCEEEecCcccc---------------------c---cc--------------------------------CCCCCCCCc
Confidence 999998653100 0 00 001345689
Q ss_pred EEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH-HHHHhhhcCeeEEeccCCHHHHH
Q 008389 198 IALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY-TWSLAALCGTSICLRQVTAKAVY 276 (567)
Q Consensus 198 ~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~~~~g~~~~~~~~~~~~~~~ 276 (567)
++++|||||||.||+|.++|+++.++.......+.+..+|+++..+|++|.+|+.. .+..+..|+++++...+++..++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 183 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFAL 183 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHH
Confidence 99999999999999999999999998888888888899999999999999999854 45556678888888888999999
Q ss_pred HHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeeccCCccCcCCcccccCC
Q 008389 277 SAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWK 356 (567)
Q Consensus 277 ~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~ 356 (567)
+.++++++|++.++|+.+..+.+.... ..+++.++++|+++++++.+.+++.+.++++.||+||++.+.....
T Consensus 184 ~~l~~~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-- 256 (414)
T PRK08308 184 NILRNTPQHILYAVPLMLHILGRLLPG-----TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD-- 256 (414)
T ss_pred HHHHHhCCeEEEcCHHHHHHHHhcCCc-----cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC--
Confidence 999999999999999999999876432 2357788999999999999999987889999999999975332110
Q ss_pred CCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCc
Q 008389 357 PEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGD 436 (567)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGD 436 (567)
......+|.|+|++ ++++.+.. + +.||+++++. ++||+|||
T Consensus 257 -----------~~~~~~~G~p~~~~-~~~~~~~~-------~--~~gel~v~~~------------------~~~~~TGD 297 (414)
T PRK08308 257 -----------MKSHLDLGNPLPHV-SVSAGSDE-------N--APEEIVVKMG------------------DKEIFTKD 297 (414)
T ss_pred -----------CCCCCccCccCCCe-EEEEecCC-------C--CCceEEEEcC------------------CceEECCc
Confidence 01235789999999 78886532 2 5699999752 57999999
Q ss_pred eEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHH
Q 008389 437 LGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAED 516 (567)
Q Consensus 437 l~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~ 516 (567)
+|++++||.+++.||.+|+||++|++|+|.+||+.+.++++|.+++|++.+++..++.++++++...+. +. ++
T Consensus 298 l~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~---~~----~~ 370 (414)
T PRK08308 298 LGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEI---DP----VQ 370 (414)
T ss_pred eEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCC---CH----HH
Confidence 999999999999999999999999999999999999999999999999999988888999988865432 33 67
Q ss_pred HHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHH
Q 008389 517 IMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLR 553 (567)
Q Consensus 517 l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~ 553 (567)
++++++++++.+++|..+.+++ +|+|++||++|+.|+
T Consensus 371 l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 371 LREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 8899999999999999999888 999999999999654
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=9.4e-57 Score=458.70 Aligned_cols=400 Identities=27% Similarity=0.424 Sum_probs=317.3
Q ss_pred HhhhhhcCCCceeEEE-CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccC
Q 008389 26 LDRAATVHPTRTSVVH-GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRL 104 (567)
Q Consensus 26 l~~~a~~~p~~~a~~~-~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~ 104 (567)
|+++|+++||++|+++ ..+++||+||+++++++|..|.+.|+++||+|+++++|++++++++|||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6889999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhccCceEEEEc--ccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcC
Q 008389 105 NAPTIAFLLGHSASAVIMVD--QEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTG 182 (567)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 182 (567)
+.+++.++++.++++++|+. .+... +........ .......++.++....... ...........
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 146 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEP-LKKLKSIFK----QEDPSSSIIILDRDDLPKK---------EALKSASLSDE 146 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHH-HHHHHHHHT----TSTTTEEEEEESHSSCTTC---------HHHHHHHHCHC
T ss_pred ccccccccccccceeEEEEeccccccc-cccchhhhc----ccccccccccccccccccc---------ccccccccccc
Confidence 99999999999999999981 01111 222211111 0012344555554322111 00011100000
Q ss_pred CCCCCCCCC-CCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHH--HHhccCCCcEEEEecCccchhhh-HHHHHHh
Q 008389 183 DPQFDWKPP-QDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVA--LIWGMNEGAVYLWTLPMFHCNGW-CYTWSLA 258 (567)
Q Consensus 183 ~~~~~~~~~-~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~d~~~~~~p~~~~~g~-~~~~~~~ 258 (567)
.. .+ ..++++++++|||||||.||+|.++|+++.+.+.... ..++++ |++++.+|++|.+|+ ...+.++
T Consensus 147 ~~-----~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l 219 (417)
T PF00501_consen 147 PQ-----SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAAL 219 (417)
T ss_dssp SH-----STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHH
T ss_pred cc-----cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccc
Confidence 00 00 0457999999999999999999999999998877754 223333 699999999999999 6777777
Q ss_pred hhcCeeEEeccCC---HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC----CcCCCCchhhhhccCCCCCHHHHHHHH
Q 008389 259 ALCGTSICLRQVT---AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED----TILPLPHVVHVNTAGAAPPPSVLHAMS 331 (567)
Q Consensus 259 ~~g~~~~~~~~~~---~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~~~~l~~lr~i~~~G~~l~~~~~~~~~ 331 (567)
..|+++++.+... +..+++.++++++|++.++|++++.+++..... ... ++++|.++++|+++++++.++++
T Consensus 220 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~-l~~lr~v~~~G~~l~~~~~~~~~ 298 (417)
T PF00501_consen 220 FSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKD-LSSLRTVISGGEPLPPDLLRRLR 298 (417)
T ss_dssp HCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTT-GTT-SEEEEESST-CHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccccccccccccccccccccccccccc-cccccccccccccCChhhccccc
Confidence 7888888876543 477899999999999999999999999832221 123 88899999999999999999999
Q ss_pred hc-CC-eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEec
Q 008389 332 QK-GF-HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSG 409 (567)
Q Consensus 332 ~~-~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~ 409 (567)
+. +. ++++.||+||++++++... ........+++|.|+|++ +++|+|++++++++.+ +.|||+++|
T Consensus 299 ~~~~~~~i~~~YG~tE~~~~~~~~~---------~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~ 366 (417)
T PF00501_consen 299 KAFGNAPIINLYGSTETGSIATIRP---------PEDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRG 366 (417)
T ss_dssp HHHTTSEEEEEEEEGGGSSEEEEEE---------TTTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEES
T ss_pred cccccccceecccccccceeeeccc---------cccccccccccccccccc-cccccccccccccccc--ccccccccC
Confidence 65 55 8999999999988876542 112223447789999999 8999999999999988 889999999
Q ss_pred ccccccccCCCccchhcccC-CccccCceEEEeCCCcEEEeccccceeeeC
Q 008389 410 NVVMKGYLKNPKANEETFAN-GWYHTGDLGVKHPDNYIEIKDRSKDIIISG 459 (567)
Q Consensus 410 ~~~~~gy~~~~~~~~~~~~~-g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~ 459 (567)
++++.||+++++.+...|.+ |||+|||+|++++||+++++||.||+||++
T Consensus 367 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 367 PNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred CccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999999999976 899999999999999999999999999864
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=8.1e-54 Score=408.25 Aligned_cols=499 Identities=21% Similarity=0.282 Sum_probs=393.8
Q ss_pred cccCHHHHHhhhhhcCCCceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 18 MALTPLWFLDRAATVHPTRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 18 ~~~t~~~~l~~~a~~~p~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
++.|+.++|.++++++|+++|+++.+ +++||+|+++.+.++|+.|...|++.||.||++|+|.++++.++|+++++|+
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv 154 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGV 154 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCc
Confidence 46899999999999999999999987 7999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEY 175 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
+...||++...+.+.|-++.++++++|++++..+.+.+....+.. ........+... ...+..++
T Consensus 155 ~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~------~~i~~~~~~~~~---------~~~g~~~L 219 (649)
T KOG1179|consen 155 ITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIK------NGIHVFSLGPTS---------VPDGIESL 219 (649)
T ss_pred eeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhh------ccceEEecCCCC---------CCchHHHH
Confidence 999999999999999999999999999999988877776433321 112222222221 12234455
Q ss_pred HHHHhcCCCCCCC---CCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhH
Q 008389 176 EKFLQTGDPQFDW---KPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWC 252 (567)
Q Consensus 176 ~~~l~~~~~~~~~---~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~ 252 (567)
.+.+......+.+ ....+-.++++.+|||||||.||+.++||......+......++++++|+++..+|++|+.|..
T Consensus 220 ~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~i 299 (649)
T KOG1179|consen 220 LAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGI 299 (649)
T ss_pred HHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHH
Confidence 5555554444322 2334568899999999999999999999999888888788889999999999999999999887
Q ss_pred HHHHH-hhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHH
Q 008389 253 YTWSL-AALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMS 331 (567)
Q Consensus 253 ~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~ 331 (567)
..+.. +..|+++++-.+|+..++|+...+|++|++.-.-.+.+.|++.+...... --.+| +.-|..+.+++++.|.
T Consensus 300 lGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er-~HkVR--la~GNGLR~diW~~Fv 376 (649)
T KOG1179|consen 300 LGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER-QHKVR--LAYGNGLRPDIWQQFV 376 (649)
T ss_pred HHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc-CceEE--EEecCCCCchHHHHHH
Confidence 66554 56677777778999999999999999999999999999999987765433 33455 4457778899999998
Q ss_pred -hcCC-eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCc------eeccccceeEeeCCCCCcc--------
Q 008389 332 -QKGF-HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGV------RFIGLEKLDVIDTRTQQPV-------- 395 (567)
Q Consensus 332 -~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~------~~~~~~~~~i~d~~~~~~~-------- 395 (567)
++|+ +|.+.||+||...-......+ .+.+|. -+..+ ++-=.|+++++++
T Consensus 377 ~RFg~~~IgE~YgaTEgn~~~~N~d~~--------------vGA~G~~~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci 441 (649)
T KOG1179|consen 377 KRFGIIKIGEFYGATEGNSNLVNYDGR--------------VGACGFMSRLLKLLYPF-RLIKVDPETGEPIRDSQGLCI 441 (649)
T ss_pred HHcCCCeEEEEeccccCcceeeeecCc--------------cccccchhhhhhhccce-EEEEecCCCCceeecCCceEE
Confidence 5566 599999999975433322111 111211 11112 3333566666654
Q ss_pred --CCCCCceEEEEEe----cc-cccccccCCCccchh-----cc--cCCccccCceEEEeCCCcEEEeccccceeeeCce
Q 008389 396 --PADGKTIGEIVMS----GN-VVMKGYLKNPKANEE-----TF--ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGE 461 (567)
Q Consensus 396 --~~~~~~~Gei~v~----~~-~~~~gy~~~~~~~~~-----~~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~ 461 (567)
++| |.|.++-+ .| .-+.||.+....+.. .| .|-||+|||+-.+|+.|++|+.+|..|.++..|+
T Consensus 442 ~~~~G--EpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGE 519 (649)
T KOG1179|consen 442 PCPPG--EPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGE 519 (649)
T ss_pred ECCCC--CCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCC
Confidence 444 77865432 22 237899986655543 34 3559999999999999999999999999999999
Q ss_pred ecchHHHHHHHhcCCCceeeEEEEeecCCC-CCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-c
Q 008389 462 NISSVEVENMMYLHPAVLEASVVARADERW-GESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-L 539 (567)
Q Consensus 462 ~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~-g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-l 539 (567)
+|+..|||+++..+.+++|+.|.|+.-+.. |-.=.|.|++.+.. +.+. ..+-..+++.||+|.+|.++.+.+ +
T Consensus 520 NVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~-~~d~----~~l~~~l~~~LP~YA~P~FlRl~~~i 594 (649)
T KOG1179|consen 520 NVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTT-EKDL----EKLYQHLRENLPSYARPRFLRLQDEI 594 (649)
T ss_pred cccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcc-cchH----HHHHHHHHhhCccccchHHHHHHhhh
Confidence 999999999999999999999998876554 33334555566665 5555 678889999999999999999988 9
Q ss_pred cCCCCccccHHHHHHHH
Q 008389 540 PKTATGKIQKHVLRAKA 556 (567)
Q Consensus 540 P~t~~GKi~r~~l~~~~ 556 (567)
++|.+=|..+..|.+..
T Consensus 595 ~~TgTFKl~K~~L~~eg 611 (649)
T KOG1179|consen 595 EKTGTFKLQKTELQKEG 611 (649)
T ss_pred hcccchhhHHHHHHHcc
Confidence 99999999999998764
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.1e-51 Score=418.29 Aligned_cols=393 Identities=24% Similarity=0.284 Sum_probs=328.2
Q ss_pred cHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcc
Q 008389 47 TWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQ 125 (567)
Q Consensus 47 Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (567)
||.||.+.+.++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCC
Q 008389 126 EYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSG 205 (567)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSG 205 (567)
.....+... ....+.+... +...................+++++++||||
T Consensus 81 ~~~~~~~~~-------------~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 130 (408)
T TIGR01733 81 ALASRLAGL-------------VLPIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSG 130 (408)
T ss_pred chhhhcccc-------------CCceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCC
Confidence 765544321 1122222111 0000001000000111134688999999999
Q ss_pred CCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEeccCC---HHHHHHHHHhh
Q 008389 206 TTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQVT---AKAVYSAIAKY 282 (567)
Q Consensus 206 tTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~~~---~~~~~~~i~~~ 282 (567)
|||.||+|.+||+++...+......++++++|++++..|++|.+++...+.++..|+++++..... +..+.+.++++
T Consensus 131 TtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 210 (408)
T TIGR01733 131 STGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEH 210 (408)
T ss_pred CCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHc
Confidence 999999999999999999998888889999999999999999999988888888898888876543 68999999999
Q ss_pred CceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhc-C-CeeeeccCCccCcCCcccccCCCCCC
Q 008389 283 GVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQK-G-FHVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
Q Consensus 283 ~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-~-~~i~~~YG~tE~~~~~~~~~~~~~~~ 360 (567)
++|.+.++|.+++.+.+... .. ++++|.++++|+++++++.+.+.+. + +.+++.||+||+++++..........
T Consensus 211 ~~t~l~~~p~~~~~l~~~~~---~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~ 286 (408)
T TIGR01733 211 PVTVLNLTPSLLALLAAALP---PA-LASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDA 286 (408)
T ss_pred CceEEEeCHHHHHHHHHhhh---hc-ccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCcccc
Confidence 99999999999999998754 22 7899999999999999999999855 5 89999999999987765332222111
Q ss_pred CCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccC-------C--c
Q 008389 361 SLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFAN-------G--W 431 (567)
Q Consensus 361 ~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~-------g--~ 431 (567)
. .. ...++|.|++++ .++|+|++ +++++.| +.|||+++|+.++.||+++++.+...|.. | |
T Consensus 287 ~-----~~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 356 (408)
T TIGR01733 287 P-----RE-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARL 356 (408)
T ss_pred C-----Cc-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceE
Confidence 0 00 257899999999 89999998 8888888 78999999999999999999888877732 2 9
Q ss_pred cccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEE
Q 008389 432 YHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASV 483 (567)
Q Consensus 432 ~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v 483 (567)
|+|||+|+++++|++++.||.+|+|+.+|++++|.+||+++..++.|.+++|
T Consensus 357 ~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 357 YRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred EECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 9999999999999999999999999999999999999999999999998865
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.3e-47 Score=421.40 Aligned_cols=480 Identities=15% Similarity=0.080 Sum_probs=350.4
Q ss_pred cCHHHHHhhhhhcCCCceeEEEC---C--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcC
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHG---S--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAG 94 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~---~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G 94 (567)
.|+.++|++.++++|+++|+... + +++||+|+.++++++|..|.+.|+++||+|+|+++|+++|+++.+||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 58999999999999999999742 3 679999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcc-cchhccCCChH
Q 008389 95 AVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPK-DLKYALGRGAV 173 (567)
Q Consensus 95 ~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 173 (567)
++++|+++ +.+++.++++.++++++|++.+..+.+.+... ...+.++.++....... ......+....
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---------~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~ 575 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---------RKLETVVYTHSFYDEDDHAVARDLNITLI 575 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---------cCCcEEEEECCCcccccccccccCCccee
Confidence 99999975 46789999999999999998776665443211 14677887753211000 00001112346
Q ss_pred HHHHHHhcCCCCCC-CCCCCCcCceEEEEe---cCCCCCCCCeeeeccHHHHHHHHHHHHHh---ccCCCcEEEEecCcc
Q 008389 174 EYEKFLQTGDPQFD-WKPPQDEWQSIALGY---TSGTTASPKGVVLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMF 246 (567)
Q Consensus 174 ~~~~~l~~~~~~~~-~~~~~~~~~~~~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~ 246 (567)
+|++++..+..... ...+.+++|++.|+| ||||||.||||++||+|++.++....... ...++|++++.+|++
T Consensus 576 s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLa 655 (1452)
T PTZ00297 576 PYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFA 655 (1452)
T ss_pred eHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHH
Confidence 68888887642111 122346788888885 99999999999999999999988765432 456789999999999
Q ss_pred chhhhHHHHHHhhhcCeeEEeccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC----------------------
Q 008389 247 HCNGWCYTWSLAALCGTSICLRQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED---------------------- 304 (567)
Q Consensus 247 ~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~---------------------- 304 (567)
|+++....+.++..|+++.. +++..+++.|++++||++.++|.+|+.+.......
T Consensus 656 HI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~ 732 (1452)
T PTZ00297 656 MLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRL 732 (1452)
T ss_pred HHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 99997766666667776643 47899999999999999999999999876431110
Q ss_pred ----CcC---------------CCCchhhhhccCCCCCHHHHHHHHhcCCeeeeccCCccCcCCcccccCCCCCCCCChh
Q 008389 305 ----TIL---------------PLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETYGPSTVCAWKPEWDSLPPE 365 (567)
Q Consensus 305 ----~~~---------------~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 365 (567)
... -...+|.+++||. ++........++++...||+||+. +.+....
T Consensus 733 ~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga---~~~l~~~l~~~i~i~~g~glTE~~---~~~~~~~-------- 798 (1452)
T PTZ00297 733 INIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVS---EESTSFSLLEHISVCYVPCLREVF---FLPSEGV-------- 798 (1452)
T ss_pred HhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCC---ccccChHHhCCceEEEecceEEee---eecCCCC--------
Confidence 000 0134566666652 222223334467888899999952 1111110
Q ss_pred hhhhhhccCCceeccccceeEeeC-CCCCccCCCCCceEEEEEecccccccccCCCccchhcccCCccccCceEEEeCCC
Q 008389 366 TQARMKARQGVRFIGLEKLDVIDT-RTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPDN 444 (567)
Q Consensus 366 ~~~~~~~~~G~~~~~~~~~~i~d~-~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g 444 (567)
....|.|+|++ +++|.+. +.+.. + ..|||+++ |+++++.|.+. .+||+ +||
T Consensus 799 -----~~~~G~Plpgv-EvKI~~~~E~~~~---~--~~GEIlvr-------~~kdpe~T~e~-~~gW~---------~dG 850 (1452)
T PTZ00297 799 -----FCVDGTPAPSL-QVDLEPFDEPSDG---A--GIGQLVLA-------KKGEPRRTLPI-AAQWK---------RDR 850 (1452)
T ss_pred -----cccCCeecCce-EEEEcccccccCC---C--CCCeEEEE-------ECCChHHHHHh-hCcCc---------cCC
Confidence 01239999999 8999874 22221 1 35999995 35778777763 35664 699
Q ss_pred cEEEeccccceee-eCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccc----------------
Q 008389 445 YIEIKDRSKDIII-SGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDK---------------- 507 (567)
Q Consensus 445 ~l~~~GR~~d~i~-~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~---------------- 507 (567)
+|+++||.+|+|| .+|++|.|..||+.+..+|.|.+++|+|...+. ++|+|+++.+.-.
T Consensus 851 ~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~----lvALVvpd~e~l~~~wa~~~gi~~~~~~~ 926 (1452)
T PTZ00297 851 TLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP----IIAIVSPNRDTVEFEWRQSHCMGEGGGPA 926 (1452)
T ss_pred eEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc----eEEEEEeCHHHHHHHHHHHcCCCcccccc
Confidence 9999999999999 999999999999999999999999999987665 8999988753211
Q ss_pred --hhhHHHHH----HHHHHH---H--hcCCCCCCCceeecCc--c-c----CCCCccccHHHHHHHHHHc
Q 008389 508 --SNEQQLAE----DIMKFC---R--AKMPAYWVPKSIVFGP--L-P----KTATGKIQKHVLRAKAKEM 559 (567)
Q Consensus 508 --~~~~~~~~----~l~~~l---~--~~l~~~~~p~~i~~~~--l-P----~t~~GKi~r~~l~~~~~~~ 559 (567)
.+..++.+ .+.+.+ . +.+..+.+++.+.+.+ + + .|++.|+.|+.+.+.|++.
T Consensus 927 ~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~ 996 (1452)
T PTZ00297 927 RQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSV 996 (1452)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHH
Confidence 01122211 233332 2 1256677887766643 4 2 7999999999999998764
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.1e-47 Score=378.61 Aligned_cols=319 Identities=25% Similarity=0.359 Sum_probs=272.2
Q ss_pred CcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe---cc
Q 008389 193 DEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL---RQ 269 (567)
Q Consensus 193 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~---~~ 269 (567)
.++++++++|||||||.||+|.++|+++..........+ ...++++..+|++|.+|+...+..++.|++.+++ ..
T Consensus 33 ~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~~ 110 (358)
T PRK07824 33 IDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSAG 110 (358)
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCCC
Confidence 457899999999999999999999999988776655443 3557889999999999998888888888888773 34
Q ss_pred CCHHHHHHHHHhhC--ceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCCeeeeccCCccCc
Q 008389 270 VTAKAVYSAIAKYG--VTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGFHVTHTYGLSETY 347 (567)
Q Consensus 270 ~~~~~~~~~i~~~~--~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~i~~~YG~tE~~ 347 (567)
+++..+++.+++++ .++...+|..+..++...... .. ++++|.+++||+++++++.+++.+.++++++.||+||++
T Consensus 111 ~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~-~~-~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~ 188 (358)
T PRK07824 111 FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAAT-AA-LAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETS 188 (358)
T ss_pred cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcccc-CC-cccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccC
Confidence 78999999999998 566677888888777654322 23 789999999999999999999988899999999999986
Q ss_pred CCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcc
Q 008389 348 GPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETF 427 (567)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~ 427 (567)
+.+. ..|.|++++ ++++.+ |||+++|+.++.||++++.... ..
T Consensus 189 ~~~~---------------------~~G~~~~g~-~v~i~~--------------Gei~v~g~~~~~gY~~~~~~~~-~~ 231 (358)
T PRK07824 189 GGCV---------------------YDGVPLDGV-RVRVED--------------GRIALGGPTLAKGYRNPVDPDP-FA 231 (358)
T ss_pred CCcC---------------------cCceeCCCC-EEEecC--------------CEEEEecCccccccCCCccccc-cc
Confidence 5321 247788888 787732 8999999999999998876432 22
Q ss_pred cCCccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccc
Q 008389 428 ANGWYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDK 507 (567)
Q Consensus 428 ~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~ 507 (567)
.+|||+|||+|++ ++|.+++.||.||+|+.+|++|+|.+||..+.++|+|.+++|++.+++..|+.++++++...+. .
T Consensus 232 ~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~-~ 309 (358)
T PRK07824 232 EPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGP-A 309 (358)
T ss_pred CCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCC-C
Confidence 5789999999999 7999999999999999999999999999999999999999999999988899999999876544 3
Q ss_pred hhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHHHH
Q 008389 508 SNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKAKE 558 (567)
Q Consensus 508 ~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~~~ 558 (567)
... +++++++++.++.+++|..|.+++ ||+|++||++|++|++++.+
T Consensus 310 ~~~----~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 310 PTL----EALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred cCH----HHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 344 788999999999999999999888 99999999999999999865
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-38 Score=340.13 Aligned_cols=409 Identities=22% Similarity=0.270 Sum_probs=337.5
Q ss_pred ccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
..++...|.+.+...|++.|+.+.+.++||+|+..++.++|..|.+.|+.++++|+++.+.+.+++++++|+++.|+.++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 36899999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|+++.++.+++..+++.++++.+++.......... ... +.++.... .
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~----------------~-- 352 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG--------------LPG-LALDDALS----------------E-- 352 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEecccccccccc--------------CCc-cccccccc----------------c--
Confidence 99999999999999999999999998333221000 000 11111000 0
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHHHHHHh
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCYTWSLA 258 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 258 (567)
....... .....+++.+|++|||||||.||||..+|+++.+...+....+.++..|+++...++.+.......+...
T Consensus 353 --~~~~~~~-~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l 429 (642)
T COG1020 353 --IPDTDPI-PQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGAL 429 (642)
T ss_pred --CCccCcc-cccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHH
Confidence 0000000 1123457899999999999999999999999999888787889999999999999987777778888889
Q ss_pred hhcCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCC-cCCCCchhhhhccCCCCCHHHHHHHHhc-
Q 008389 259 ALCGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDT-ILPLPHVVHVNTAGAAPPPSVLHAMSQK- 333 (567)
Q Consensus 259 ~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~-~~~l~~lr~i~~~G~~l~~~~~~~~~~~- 333 (567)
..|++++.... .++..+...+.++++|.+..+|..+..++....... ......+|.+++||+.++......+...
T Consensus 430 ~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~ 509 (642)
T COG1020 430 LEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLA 509 (642)
T ss_pred hCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhc
Confidence 99998888753 578999999999999999999999999987622211 1113358999999999999999988754
Q ss_pred --CCeeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccc
Q 008389 334 --GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNV 411 (567)
Q Consensus 334 --~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~ 411 (567)
...+.+.||.||+...+.......... . ....|.|+++. .+.|+| +.++++|.+ ..||+++.|.+
T Consensus 510 ~~~~~l~~~ygpTe~~~~~~~~~~~~~~~--------~-~~piG~p~~n~-~~~ild-~~~~~~p~g--v~gel~i~g~~ 576 (642)
T COG1020 510 ALARRLLNLYGPTEATLDAPSFPISAELE--------S-RVPIGRPVANT-QLYILD-QGLRPLPLG--VPGELYIAGLG 576 (642)
T ss_pred cccceEeeccCccHHhhheeeEEcccccC--------C-CCCcceeeCCC-eEEEEC-CCCCcCCCC--CCeeeEECCcc
Confidence 468999999999654444332211110 0 46889999998 899999 449999999 78999999999
Q ss_pred ccccccCCCccchhcccCC-ccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCC
Q 008389 412 VMKGYLKNPKANEETFANG-WYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHP 476 (567)
Q Consensus 412 ~~~gy~~~~~~~~~~~~~g-~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~ 476 (567)
+..||+++++.+..+|... +|+|||++++.+||.+.++||.|+++|++|.++.+.+||..+.++|
T Consensus 577 ~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 577 LALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 9999999999999999775 9999999999999999999999999999999999999999998764
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=1.6e-38 Score=314.36 Aligned_cols=287 Identities=21% Similarity=0.233 Sum_probs=226.8
Q ss_pred CceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCC--CcEEEEecCccchhhhHHHHH-HhhhcCeeEEeccCC
Q 008389 195 WQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNE--GAVYLWTLPMFHCNGWCYTWS-LAALCGTSICLRQVT 271 (567)
Q Consensus 195 ~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~d~~~~~~p~~~~~g~~~~~~-~~~~g~~~~~~~~~~ 271 (567)
+..++++|||||||.||+|.++|+++.+.+......+++.. .+++++.+|++|++|+.+.+. .+..|++++....++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 35778999999999999999999999988887777777654 467999999999999865444 455677777777788
Q ss_pred HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHhcCC-eeeeccCCccCcCCc
Q 008389 272 AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQKGF-HVTHTYGLSETYGPS 350 (567)
Q Consensus 272 ~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~-~i~~~YG~tE~~~~~ 350 (567)
+..+++.++.+ |++.++|++++.+.+.. .. +++++. ++||++++++..+.+++.+. ++++.||+||+++++
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~-l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~ 246 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD----YR-LPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIG 246 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC----cC-CCccee-EecCCCCCHHHHHHHHHhcccchhheeccccccccc
Confidence 88888887654 89999999999998753 22 566775 67899999999999987764 699999999998755
Q ss_pred ccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccchhcccCC
Q 008389 351 TVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANEETFANG 430 (567)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g 430 (567)
+... ....|.++|++ .+.+ + + +. + .|+ ..
T Consensus 247 ~~~~----------------~~~~~~~~p~~-~~~~-~-~-~~----------~---~g~------------------~~ 275 (386)
T TIGR02372 247 LREA----------------PDDPFRLLPDL-ACFA-D-T-LS----------S---AGL------------------AR 275 (386)
T ss_pred cccC----------------CCCCcccCCCc-cccC-C-C-cc----------C---CCc------------------cc
Confidence 4321 02245566666 3332 1 1 10 0 011 12
Q ss_pred ccccCceEEEeCCCcEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhh
Q 008389 431 WYHTGDLGVKHPDNYIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNE 510 (567)
Q Consensus 431 ~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~ 510 (567)
|++|||+|+++++|++++.||.||+|+++|++|+|.+||+.+.++|+|.+++|.. .|+++.++|+++++. ..
T Consensus 276 ~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~-~~-- 347 (386)
T TIGR02372 276 RLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDA-DE-- 347 (386)
T ss_pred eeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCC-Ch--
Confidence 5889999999999999999999999999999999999999999999999998853 256789999987654 22
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCcccc
Q 008389 511 QQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQ 548 (567)
Q Consensus 511 ~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~ 548 (567)
+.+.++++++++++++.|++|..+.+++ +|+|++||++
T Consensus 348 ~~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 348 AELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 2234688999999999999999999988 9999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=2.8e-37 Score=313.82 Aligned_cols=325 Identities=19% Similarity=0.203 Sum_probs=240.7
Q ss_pred CcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHH---HHHhccCCCcEEEEecCccchh-hhHHHHHHhhhcCeeEEec
Q 008389 193 DEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSV---ALIWGMNEGAVYLWTLPMFHCN-GWCYTWSLAALCGTSICLR 268 (567)
Q Consensus 193 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~-g~~~~~~~~~~g~~~~~~~ 268 (567)
+.++++.+++||||||.||++.++|.++..+.... ...++++++|++++..++.+.. ++...+.....|++++.+.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45678889999999999999999999987654433 2345889999998877655433 3333444556777777777
Q ss_pred cCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcC-CCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccC
Q 008389 269 QVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTIL-PLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSET 346 (567)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~ 346 (567)
..++..+++.|+++++|++.++|+++..|++........ ...++|.++++||++++++++.+++ +++++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 677899999999999999999999999998754332221 1358999999999999999999985 59999999999998
Q ss_pred cCC--cccccCCCCCCCCChhhhhhhhccCCceec--cccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCcc
Q 008389 347 YGP--STVCAWKPEWDSLPPETQARMKARQGVRFI--GLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKA 422 (567)
Q Consensus 347 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~ 422 (567)
++. ...|.. ...|.+++ .+ .++|+|+++++++++| +.|||++++..
T Consensus 233 ~~~~~~~~~~~----------------~~~g~~~~~~~~-~~eivd~~~g~~v~~G--e~Gelvvt~~~----------- 282 (422)
T TIGR02155 233 IGPGVAMECVE----------------TQDGLHIWEDHF-YPEIIDPHTGEVLPDG--EEGELVFTTLT----------- 282 (422)
T ss_pred cCCceeecccc----------------cCCCceEecCee-EEEEECCCCCCCCCCC--CeeEEEEecCC-----------
Confidence 532 222210 01122332 34 6789998789999988 88999998742
Q ss_pred chhcccCCccccCceEEEeCC-C-----cEEEeccccceeeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcce
Q 008389 423 NEETFANGWYHTGDLGVKHPD-N-----YIEIKDRSKDIIISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPC 496 (567)
Q Consensus 423 ~~~~~~~g~~~TGDl~~~~~~-g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~ 496 (567)
...|..+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.++.++|+|.....+........+.+.
T Consensus 283 -~~~~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~ 361 (422)
T TIGR02155 283 -KEALPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELT 361 (422)
T ss_pred -ccccceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEE
Confidence 23445679999999999875 4 4689999999999999999999999999999999843333444444456788
Q ss_pred EEEEEcCCcc----chhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHH
Q 008389 497 AFVTLKPEVD----KSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKH 550 (567)
Q Consensus 497 ~~v~~~~~~~----~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~ 550 (567)
++|+..++.. ..+.+.+.++|++.+++.+..+.. ..+..++ ||+|+ ||+.|-
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 8888765431 122344567888899988876643 1222233 99988 999763
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=2.3e-32 Score=277.84 Aligned_cols=512 Identities=15% Similarity=0.153 Sum_probs=353.0
Q ss_pred cCHHHHHhhhhhcCCCceeEEECC------ccccHHHHHHHHHHHHHHHHHc-cCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGS------TRYTWLQTYQRCRRLASALCKR-SIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
.|+.|+|+..+..+||++|+...+ .++||++|..+|.+++..|... -+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 789999999999999999999843 7899999999999999999964 789999999999999999999999999
Q ss_pred cCCeeeecccc------CChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchh
Q 008389 93 AGAVLNAVNIR------LNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKY 166 (567)
Q Consensus 93 ~G~~~v~i~~~------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (567)
+|.+++|++|. .....+..+++.+++.+|+++......++..........+ ..+.++...+...
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s---~~p~i~~~~~~~~------- 919 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQS---AIPLILVLPKLPE------- 919 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhh---cchhhhcccccch-------
Confidence 99999999884 2356678899999999999999877766544322222111 1222222222100
Q ss_pred ccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCcc
Q 008389 167 ALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMF 246 (567)
Q Consensus 167 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~ 246 (567)
............. ...+......+.+|++-+.--++|.--++.++|..+++.++.......+.+..-++...+.+
T Consensus 920 ---t~~k~~~~~~k~~--~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 920 ---TIRKRKKNIKKLN--TPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred ---hhhhhhhhhhccC--CCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 0001111111111 11122235668899999999999999999999999999999999999888888888888888
Q ss_pred chhhhHHHHHHhhh-cCeeEEecc----CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchh-----hhh
Q 008389 247 HCNGWCYTWSLAAL-CGTSICLRQ----VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVV-----HVN 316 (567)
Q Consensus 247 ~~~g~~~~~~~~~~-g~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr-----~i~ 316 (567)
...|+...++...+ |...+++++ .++..++..|+++++.-.+.+-..++.+.......... ++... .++
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~en-l~~~gnn~s~s~v 1073 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVEN-LSKRGNNTSSSIV 1073 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccch-hhhhhccccccee
Confidence 77887766555554 555555543 47899999999999999999988888877654433222 22211 121
Q ss_pred -ccCCCCCHHHHHHHHhc----CC---eeeeccCCccCcCCcccccC--------------CCCCCCCC--hhhhhhhhc
Q 008389 317 -TAGAAPPPSVLHAMSQK----GF---HVTHTYGLSETYGPSTVCAW--------------KPEWDSLP--PETQARMKA 372 (567)
Q Consensus 317 -~~G~~l~~~~~~~~~~~----~~---~i~~~YG~tE~~~~~~~~~~--------------~~~~~~~~--~~~~~~~~~ 372 (567)
..-+.......+.+.+. +. .+...|+.-=--.++..... .++..... .........
T Consensus 1074 v~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~ 1153 (1363)
T KOG3628|consen 1074 VPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLY 1153 (1363)
T ss_pred eecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccc
Confidence 12233333334444322 22 23333432211111111000 00000000 001111223
Q ss_pred cCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCc-cchhcc----------cCCccccCceEEEe
Q 008389 373 RQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPK-ANEETF----------ANGWYHTGDLGVKH 441 (567)
Q Consensus 373 ~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~-~~~~~~----------~~g~~~TGDl~~~~ 441 (567)
..|...+++ ++.|++|++-.++..| +.||||+.|.+-+.+|+...+ .....| ..+|-||||+|+..
T Consensus 1154 dSG~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~ 1230 (1363)
T KOG3628|consen 1154 DSGKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLR 1230 (1363)
T ss_pred cCCcccccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeee
Confidence 457788888 8999999999999888 899999999988887775422 222333 23599999999985
Q ss_pred C------C----CcEEEeccccceeeeCceecchHHHHHHH-hcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhh
Q 008389 442 P------D----NYIEIKDRSKDIIISGGENISSVEVENMM-YLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNE 510 (567)
Q Consensus 442 ~------~----g~l~~~GR~~d~i~~~G~~v~~~~iE~~l-~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~ 510 (567)
. + ..+|++|-.++.+.++|.+++|.+||..+ +.|+.|.+|+|+....- ++++++...+
T Consensus 1231 ~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~gl-----vVvviE~~gq------ 1299 (1363)
T KOG3628|consen 1231 RTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATGL-----VVVVIECHGQ------ 1299 (1363)
T ss_pred eeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCCe-----EEEEEEecCc------
Confidence 3 2 35899999999999999999999999988 46899999999987542 4555554332
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceee-cCc---ccCCCCccccHHHHHHHHHHcCC
Q 008389 511 QQLAEDIMKFCRAKMPAYWVPKSIV-FGP---LPKTATGKIQKHVLRAKAKEMGP 561 (567)
Q Consensus 511 ~~~~~~l~~~l~~~l~~~~~p~~i~-~~~---lP~t~~GKi~r~~l~~~~~~~~~ 561 (567)
+.+.+-+--.+...|.+|.++..++ |++ +|+++.|..+|..+++.+.+..+
T Consensus 1300 ~~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL 1354 (1363)
T KOG3628|consen 1300 QELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKL 1354 (1363)
T ss_pred hhHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhccc
Confidence 1122233334455677787777555 666 99999999999999999887754
No 125
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-32 Score=287.32 Aligned_cols=505 Identities=19% Similarity=0.174 Sum_probs=336.3
Q ss_pred CHHHHHhhhhhcCCCceeEEECC--------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhh
Q 008389 21 TPLWFLDRAATVHPTRTSVVHGS--------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPM 92 (567)
Q Consensus 21 t~~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~ 92 (567)
++...+++.+..+|...+..+-. ..+||++.+..+..+++.|...|...|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 56667888888888888876621 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCC----hHH---HHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccch
Q 008389 93 AGAVLNAVNIRLN----APT---IAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLK 165 (567)
Q Consensus 93 ~G~~~v~i~~~~~----~~~---l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (567)
.|..+.+++|.++ ++. +.+.+......++ ..+. ++.+.-++..+..
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~-------~~l~------------------i~~~~~~~~~~~~-- 169 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIV-------RRLN------------------IIDILLNSLFPKL-- 169 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccceeh-------hhhh------------------hHHHHhhcccccc--
Confidence 9999999999998 221 1111111111111 1000 0000000000000
Q ss_pred hccCCChHHHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCc
Q 008389 166 YALGRGAVEYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPM 245 (567)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~ 245 (567)
........|..+..... ........++..+.+.||||+||.||+|..+|..+.+...+....+.....+++-.....
T Consensus 170 -sv~~~~~~f~~~~~~~~--~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~ 246 (1032)
T KOG1178|consen 170 -SVETIADSFQMVLHNED--TREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSV 246 (1032)
T ss_pred -chhhccchhhhhhccCC--CcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhhee
Confidence 00000011111111111 111122345668889999999999999999999999999888888888877765333333
Q ss_pred cchhhhHHHHHHhhhcCeeEEec-c---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC----C-----cC---CC
Q 008389 246 FHCNGWCYTWSLAALCGTSICLR-Q---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED----T-----IL---PL 309 (567)
Q Consensus 246 ~~~~g~~~~~~~~~~g~~~~~~~-~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----~-----~~---~l 309 (567)
+........+.++++.+..+..+ . .++.++...+++++++..+.+|++.++++...... . .+ ..
T Consensus 247 ~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~ 326 (1032)
T KOG1178|consen 247 YFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKR 326 (1032)
T ss_pred ecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccc
Confidence 33333344455555555544442 2 34799999999999999999999988888765442 0 01 13
Q ss_pred CchhhhhccCCCCCHHHHHHHHhc---CCeeeeccCCccCcCCcccccCCCCCCCCChhhh---hhhhccCCceeccccc
Q 008389 310 PHVVHVNTAGAAPPPSVLHAMSQK---GFHVTHTYGLSETYGPSTVCAWKPEWDSLPPETQ---ARMKARQGVRFIGLEK 383 (567)
Q Consensus 310 ~~lr~i~~~G~~l~~~~~~~~~~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~~~~~~~ 383 (567)
+.|+....+|++....+...+... ++. ..-|+.++..+........+.-..+..+.. .......|.+. -
T Consensus 327 ~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~-~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~----~ 401 (1032)
T KOG1178|consen 327 SCLKLVVLGGEPLLVSLYTSTFDLLAEIFF-GLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLT----V 401 (1032)
T ss_pred hhheeeeecCCccchhhhhhhhhcccceee-eecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCc----c
Confidence 478888999999998888855533 222 233888888777665443322111000000 00000111111 1
Q ss_pred eeEeeCCCCCccCCC--CCceEEEEEecccccccccCCCccchhcc------cCCccccCceEEEeCCCcEEEeccccce
Q 008389 384 LDVIDTRTQQPVPAD--GKTIGEIVMSGNVVMKGYLKNPKANEETF------ANGWYHTGDLGVKHPDNYIEIKDRSKDI 455 (567)
Q Consensus 384 ~~i~d~~~~~~~~~~--~~~~Gei~v~~~~~~~gy~~~~~~~~~~~------~~g~~~TGDl~~~~~~g~l~~~GR~~d~ 455 (567)
+++.... +.+...+ ..+.|.-...+..+..| +..++.....+ .+..|+|||.|+..++|.+.+.||.|++
T Consensus 402 ~~~~~~~-~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~q 479 (1032)
T KOG1178|consen 402 LESLYRA-GGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQ 479 (1032)
T ss_pred eeeeecc-CcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccce
Confidence 2222221 3333322 01222222223344445 22333222222 3558999999999999999999999999
Q ss_pred eeeCceecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceee
Q 008389 456 IISGGENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIV 535 (567)
Q Consensus 456 i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~ 535 (567)
||.+|.++...+|+..+..+|.|.++.+....+.+.++++.+|++...+...... ..|+.++..+|+.|++|..++
T Consensus 480 IK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~----~~i~~~l~~~La~y~vPs~~V 555 (1032)
T KOG1178|consen 480 IKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLI----RDIRNYLKKELASYMLPSLVV 555 (1032)
T ss_pred EEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCchhH----HHHHHhhcccccceecceEEE
Confidence 9999999999999999999999999999999999889999999998887744443 789999999999999999888
Q ss_pred cCc-ccCCCCccccHHHHHHHHHHcCCccccC
Q 008389 536 FGP-LPKTATGKIQKHVLRAKAKEMGPVRKSK 566 (567)
Q Consensus 536 ~~~-lP~t~~GKi~r~~l~~~~~~~~~~~~~~ 566 (567)
.++ +|+|++||||+++|.+...+...+-.|+
T Consensus 556 ~l~~vPl~~~GKvDkkaL~~~~s~~~~~~~s~ 587 (1032)
T KOG1178|consen 556 PLAKVPLNPNGKVDKKALLEYNSKLTNVQDSS 587 (1032)
T ss_pred EhhhCCcCCCCCcChhhhhhhhhhhcccccce
Confidence 777 9999999999999999777766655543
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.98 E-value=2.4e-30 Score=262.78 Aligned_cols=321 Identities=17% Similarity=0.133 Sum_probs=218.7
Q ss_pred CCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHH-HHHhhhcCeeEEe
Q 008389 192 QDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYT-WSLAALCGTSICL 267 (567)
Q Consensus 192 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~-~~~~~~g~~~~~~ 267 (567)
.+.++++.+++||||||.||+|.+||+++.......... .+++++|+++...+..+..+.... ..+...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 345688899999999999999999999988776555443 388999999999888776554433 3344556654332
Q ss_pred ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcC-CCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCcc
Q 008389 268 RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTIL-PLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSE 345 (567)
Q Consensus 268 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE 345 (567)
. .....++.|+++++|.+.++|+.+..|++........ ...++|.+++|||++++++++.+++ +++++++.||+||
T Consensus 163 ~--~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE 240 (445)
T TIGR03335 163 G--KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTE 240 (445)
T ss_pred C--chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhh
Confidence 2 2356789999999999999999988887643332221 1468999999999999999998885 5999999999999
Q ss_pred CcCCcccccCCCCCCCCChhhhhhhhccCCceec--cccceeEeeCCCCCccCCCCCceEEEEEeccccc-----ccccC
Q 008389 346 TYGPSTVCAWKPEWDSLPPETQARMKARQGVRFI--GLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVM-----KGYLK 418 (567)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~-----~gy~~ 418 (567)
++ ++..|... .|..++ .+ .++|+|++++.++++| +.|||++++.... ...+
T Consensus 241 ~~-~~~~c~~~-----------------~g~h~~~d~~-~vEIvDp~~~~~vp~G--e~GELvvT~L~~~~~r~~~Pli- 298 (445)
T TIGR03335 241 GT-MCGECQAV-----------------AGLHVPEDLV-HLDVYDPRHQRFLPDG--ECGRIVLTTLLKPGERCGSLLI- 298 (445)
T ss_pred hh-heEEecCC-----------------CCccccCCce-EEEEEcCCCCCCCcCC--CceEEEEEecCCCCccCCceEE-
Confidence 85 33333211 122232 34 6899999988889988 8999999886431 1122
Q ss_pred CCccchhcccCCccccCceEEEeC-C----C----cEEEeccccceeeeCceecchHHHHHHHhcC---CCce-eeEEEE
Q 008389 419 NPKANEETFANGWYHTGDLGVKHP-D----N----YIEIKDRSKDIIISGGENISSVEVENMMYLH---PAVL-EASVVA 485 (567)
Q Consensus 419 ~~~~~~~~~~~g~~~TGDl~~~~~-~----g----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~---~~i~-~~~v~~ 485 (567)
.|+|||++++.. + | .+...||.||+++++|.+++|.+||++|.+. +++. +..++.
T Consensus 299 ------------RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~ 366 (445)
T TIGR03335 299 ------------NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFL 366 (445)
T ss_pred ------------EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEE
Confidence 299999999732 2 2 2445699999999999999999999999994 5554 344544
Q ss_pred eecCCCCCcceEEEEEcCCccchhhHHHHHHHHHH----H---HhcCCCCCCCceeecCc---ccCC-CCccccH
Q 008389 486 RADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKF----C---RAKMPAYWVPKSIVFGP---LPKT-ATGKIQK 549 (567)
Q Consensus 486 ~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~----l---~~~l~~~~~p~~i~~~~---lP~t-~~GKi~r 549 (567)
.........+.+.|+..+.. ..+.+.+.+.+.+. + ++.+....+...+.+++ +||+ +.||..|
T Consensus 367 ~~~~~~~~~~~v~~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 367 YGEEEGEITLRVSLECEDKD-NCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred ecCCCCCceEEEEEEecCcc-cchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 33322223455666665543 22233333334333 1 11111222223344433 9998 4699765
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.97 E-value=2.1e-28 Score=234.71 Aligned_cols=323 Identities=18% Similarity=0.231 Sum_probs=237.5
Q ss_pred CCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh---ccCCCcEEEEecCcc-chhhhHHHHHHhhhcCeeEEe
Q 008389 192 QDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMF-HCNGWCYTWSLAALCGTSICL 267 (567)
Q Consensus 192 ~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~-~~~g~~~~~~~~~~g~~~~~~ 267 (567)
...++...+..||||||+|+.+.+|+..+..++..+.+.+ +...+|++..+.... +..|+.....+--.|.+++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 3445666788999999999999999999888877776654 788999988877642 333334444444466666656
Q ss_pred ccCCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcC-CCCchhhhhccCCCCCHHHHHHHH-hcCCeeeeccCCcc
Q 008389 268 RQVTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTIL-PLPHVVHVNTAGAAPPPSVLHAMS-QKGFHVTHTYGLSE 345 (567)
Q Consensus 268 ~~~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~l~~lr~i~~~G~~l~~~~~~~~~-~~~~~i~~~YG~tE 345 (567)
..-+....+.+++++++|++.++|+.+..|++...+.... .-.++|.+++|+|+.+++.++.+. .+|+..++.||+||
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 6668899999999999999999999999999876665311 145889999999999999999999 55999999999999
Q ss_pred CcCCc-ccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEecccccccccCCCccch
Q 008389 346 TYGPS-TVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYLKNPKANE 424 (567)
Q Consensus 346 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~~~~~~~~ 424 (567)
..+.. ..|......+. .-+.. .++|+||++|++++.| +.|||+++..+- .....
T Consensus 247 ~~g~g~~eC~~~~glhi---------------~eD~~-~~Ei~dP~t~e~l~dg--e~GelV~T~L~~-------~~~Pl 301 (438)
T COG1541 247 GFGPGAGECTERNGLHI---------------WEDHF-IFEIVDPETGEQLPDG--ERGELVITTLTK-------EGMPL 301 (438)
T ss_pred ccCCcccccccccCCCc---------------chhhc-eeeeecCCcCccCCCC--CeeEEEEEeccc-------cCcce
Confidence 97773 45544332111 11223 7999999999999999 889999987531 11111
Q ss_pred hcccCCccccCceEEEeCC----C-----cEEEeccccceeeeCceecchHHHHHHHhcCCCce-eeEEEEeecCCCCCc
Q 008389 425 ETFANGWYHTGDLGVKHPD----N-----YIEIKDRSKDIIISGGENISSVEVENMMYLHPAVL-EASVVARADERWGES 494 (567)
Q Consensus 425 ~~~~~g~~~TGDl~~~~~~----g-----~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~-~~~v~~~~~~~~g~~ 494 (567)
-.|+|||++.+.++ | -..+.||.||++.+.|.+|+|.+||.++.+.+.+. +.+++... ......
T Consensus 302 -----IRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~ 375 (438)
T COG1541 302 -----IRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDE 375 (438)
T ss_pred -----EEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCce
Confidence 13999999999863 2 24689999999999999999999999999999998 77777666 444567
Q ss_pred ceEEEEEcCCcc-chhhHHHHHHHHHHHHhcCCCCCCCceeecC---cccCCCCccccH
Q 008389 495 PCAFVTLKPEVD-KSNEQQLAEDIMKFCRAKMPAYWVPKSIVFG---PLPKTATGKIQK 549 (567)
Q Consensus 495 ~~~~v~~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~---~lP~t~~GKi~r 549 (567)
+.+.|+..++.. ..+..++...+.+.+++.+. ....|.++ .+|||-. |..|
T Consensus 376 L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~v~~v~~g~l~r~~~-K~kr 430 (438)
T COG1541 376 LTVRVELENEAEELEDERRLAKKLIKNIKSELG---VRVEVELVEPGELPRTEG-KAKR 430 (438)
T ss_pred EEEEEEecCcccchHHHHHHHHHHHHHHHhhcC---CceEEEEEeccceecccC-ceeE
Confidence 888888876521 22222233455555555454 22333333 3999985 6543
No 128
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=8.4e-26 Score=206.92 Aligned_cols=218 Identities=11% Similarity=0.059 Sum_probs=163.6
Q ss_pred HhhhhhcCCCceeEEEC-C-----ccccHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 26 LDRAATVHPTRTSVVHG-S-----TRYTWLQTYQRCRRLASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 26 l~~~a~~~p~~~a~~~~-~-----~~~Ty~el~~~~~~lA~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
+...+..+|+++|+++. + .++||+||.+++.++|+.|++ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 46678889999999853 2 369999999999999999998 7999999999999999999999999999999999
Q ss_pred eccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChHHHHHH
Q 008389 99 AVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAVEYEKF 178 (567)
Q Consensus 99 ~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
|++ .+++++++++++..+.+.. . ..++.+........... ....+...+.+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 133 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-------------S-GEVVALSLDPLGRRVAG-ELPPGVIDFAPE 133 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-------------C-CceEEEeccccccCCCC-CCCCcccchhhh
Confidence 995 6799999999887665320 1 22333321100000000 001223466666
Q ss_pred HhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHhccCCCcEEEEecCccchhhhHH-HHHH
Q 008389 179 LQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIWGMNEGAVYLWTLPMFHCNGWCY-TWSL 257 (567)
Q Consensus 179 l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~-~~~~ 257 (567)
+........+.....++|++.++||||+ +|++++.+. ...+++++|+++ ..|++|.+|+.. .+..
T Consensus 134 ~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~ 199 (227)
T TIGR03089 134 VRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAP 199 (227)
T ss_pred hhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHH
Confidence 6543333222213456899999999986 666665554 566789999999 999999999965 5566
Q ss_pred hhhcCeeEEeccCCHHHHHHHHHhhCce
Q 008389 258 AALCGTSICLRQVTAKAVYSAIAKYGVT 285 (567)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~~~~i~~~~~t 285 (567)
+..|+++++++.+++..+++.|+++|+|
T Consensus 200 l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 200 LAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 6779999999999999999999999987
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.88 E-value=4.7e-21 Score=196.20 Aligned_cols=502 Identities=17% Similarity=0.101 Sum_probs=333.4
Q ss_pred HHHHHhhhhhcCCCceeEEECC-----ccccHHHHHHHHHHHHH-HHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhc
Q 008389 22 PLWFLDRAATVHPTRTSVVHGS-----TRYTWLQTYQRCRRLAS-ALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMA 93 (567)
Q Consensus 22 ~~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~el~~~~~~lA~-~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~ 93 (567)
+..+++..-..++...|.+.-+ ..+||..+..++.+.|+ .|.+.|+.++|+|.+++..+ +++++..++|...
T Consensus 96 ~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~ 175 (1363)
T KOG3628|consen 96 IIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLL 175 (1363)
T ss_pred hHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcccccc
Confidence 4566666667788888887733 78999999999999999 66677999999999998665 8999999999999
Q ss_pred CCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHhhhcCCCCCCCeEEEecCCCCCcccchhccCCChH
Q 008389 94 GAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIMEEKSNGRFKPPLLIVIGDESCDPKDLKYALGRGAV 173 (567)
Q Consensus 94 G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (567)
|.+++|+.+..+.+++..+++..+.+++++.......+........ ....+. ..+..
T Consensus 176 g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s--------~~k~v~---------------~w~t~ 232 (1363)
T KOG3628|consen 176 GIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVS--------LAKAVA---------------WWKTN 232 (1363)
T ss_pred ceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCccc--------HHHHHH---------------hhhcc
Confidence 9999999999999999999999999999987766544332210000 000000 00000
Q ss_pred HHHHHHhcCCCCCCCCCCCCcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHH--------------------HHhcc
Q 008389 174 EYEKFLQTGDPQFDWKPPQDEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVA--------------------LIWGM 233 (567)
Q Consensus 174 ~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--------------------~~~~~ 233 (567)
++. .....+....++.+-. ..+|-||.+++|.--+++.+|+ ++.+..... ..+++
T Consensus 233 ~~k---~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~ 307 (1363)
T KOG3628|consen 233 DFK---GNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPV 307 (1363)
T ss_pred ccc---ceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcccc
Confidence 000 0000011111122223 7889999999999999999998 444332221 12345
Q ss_pred CCCcEEEEecCccchhhhHHHH-HHhhhcCeeEEecc---CCHHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCC-----
Q 008389 234 NEGAVYLWTLPMFHCNGWCYTW-SLAALCGTSICLRQ---VTAKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSED----- 304 (567)
Q Consensus 234 ~~~d~~~~~~p~~~~~g~~~~~-~~~~~g~~~~~~~~---~~~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~----- 304 (567)
...+.++.........|+..+. .+.+.|.|.+.+++ +.|..+.+++.+++.+++.+--..+++........
T Consensus 308 ~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~ 387 (1363)
T KOG3628|consen 308 PSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATL 387 (1363)
T ss_pred CcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCccccc
Confidence 5677777777777777776554 45566777777766 67899999999999999998877776655332211
Q ss_pred -----CcCCCCchhhhhccCCCCCHHHHHHHHhc-----CC---e---------------eeeccCCccCcCCcccccCC
Q 008389 305 -----TILPLPHVVHVNTAGAAPPPSVLHAMSQK-----GF---H---------------VTHTYGLSETYGPSTVCAWK 356 (567)
Q Consensus 305 -----~~~~l~~lr~i~~~G~~l~~~~~~~~~~~-----~~---~---------------i~~~YG~tE~~~~~~~~~~~ 356 (567)
...+++++|.+++.-..++.+..+..... |. + ....=+++|.+.........
T Consensus 388 s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~ 467 (1363)
T KOG3628|consen 388 SFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQ 467 (1363)
T ss_pred chhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCccc
Confidence 11237899999999999998876655422 22 1 11112223333222211110
Q ss_pred CCC-----------------C--CCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEEEEEeccccccccc
Q 008389 357 PEW-----------------D--SLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGEIVMSGNVVMKGYL 417 (567)
Q Consensus 357 ~~~-----------------~--~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Gei~v~~~~~~~gy~ 417 (567)
... . ..........+..+|...|+-..+.++++++.+.|..+ ++|||||.+++...+||
T Consensus 468 ~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~~~~~ 545 (1363)
T KOG3628|consen 468 MADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLGKLFY 545 (1363)
T ss_pred ccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCccccee
Confidence 000 0 00111222334566777776657899999999999998 89999999999999999
Q ss_pred CCCccchhccc-------------CCccccCceEEEeCCCcEEEeccccceee-eCceecchHH----------HHHHHh
Q 008389 418 KNPKANEETFA-------------NGWYHTGDLGVKHPDNYIEIKDRSKDIII-SGGENISSVE----------VENMMY 473 (567)
Q Consensus 418 ~~~~~~~~~~~-------------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~-~~G~~v~~~~----------iE~~l~ 473 (567)
..+..+...|. ..+.|||-+|+++ +|.++++|-.+|.+. ..|..++..+ |+.+++
T Consensus 546 al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R 624 (1363)
T KOG3628|consen 546 ALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMR 624 (1363)
T ss_pred eccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHh
Confidence 99888888772 2389999999999 777777777777776 7887766544 455566
Q ss_pred cCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCc-e-eecCc---ccCCCCcccc
Q 008389 474 LHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPK-S-IVFGP---LPKTATGKIQ 548 (567)
Q Consensus 474 ~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~-~-i~~~~---lP~t~~GKi~ 548 (567)
..+.|.++.++- .++.++.++..+...+.+.- +.+.+.++. +...+... . +.+++ +|||+-|-+.
T Consensus 625 ~v~~VF~~saf~------~E~~~Vv~~esP~a~e~~~~---q~~~~v~q~-l~~iHqv~vyCilivP~~tLPrt~~~Gi~ 694 (1363)
T KOG3628|consen 625 GVIAVFDVSAFE------DEHIVVVVLESPDATEENSF---QWMSRVFQA-LDSIHQVGVYCILIVPANTLPRTPLGGIH 694 (1363)
T ss_pred ccceEEEEeeee------cceEEEEEEeCcchhhhhhh---hHHHHHHHH-HHHHhcccceEEEEeccccCCCccccccc
Confidence 778888888876 23466666666655332221 222222222 22222222 2 22444 9999998899
Q ss_pred HHHHHHHHHHcCCccc
Q 008389 549 KHVLRAKAKEMGPVRK 564 (567)
Q Consensus 549 r~~l~~~~~~~~~~~~ 564 (567)
-..+++.|.++.++..
T Consensus 695 ~~~~k~~F~~G~L~~~ 710 (1363)
T KOG3628|consen 695 NNECKQAFLEGSLPPS 710 (1363)
T ss_pred cHHHHHHHHcCCCCcc
Confidence 9999999999987754
No 130
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.3e-21 Score=186.39 Aligned_cols=117 Identities=21% Similarity=0.262 Sum_probs=106.8
Q ss_pred cccCCccccCceEEE-eCCCcEEEeccccceeeeCc---eecchHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEE
Q 008389 426 TFANGWYHTGDLGVK-HPDNYIEIKDRSKDIIISGG---ENISSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTL 501 (567)
Q Consensus 426 ~~~~g~~~TGDl~~~-~~~g~l~~~GR~~d~i~~~G---~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~ 501 (567)
.|.+|||+|||+|++ |++|++++.||.+ +| ++|+|. ||+++.++|+|.+|+|++++++.+|+.++|+|++
T Consensus 205 ~~~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~ 278 (365)
T PRK09188 205 LPSRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEA 278 (365)
T ss_pred cccCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEE
Confidence 347899999999998 6999999999998 78 799999 9999999999999999999999999999999997
Q ss_pred cCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCc-ccCCCCccccHHHHHHHH
Q 008389 502 KPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGP-LPKTATGKIQKHVLRAKA 556 (567)
Q Consensus 502 ~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~-lP~t~~GKi~r~~l~~~~ 556 (567)
... .+. ++++++++++|+. ++|..+.+++ +|+|++||++|+.|+.++
T Consensus 279 ~~~---~~~----~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 279 ELP---ADE----KSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIA 326 (365)
T ss_pred CCC---CCH----HHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHh
Confidence 642 233 6899999999999 9999999888 999999999999999886
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.79 E-value=3.6e-17 Score=162.33 Aligned_cols=253 Identities=14% Similarity=0.129 Sum_probs=164.6
Q ss_pred eEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCe-eEEe-ccCC
Q 008389 197 SIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGT-SICL-RQVT 271 (567)
Q Consensus 197 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~-~~~~-~~~~ 271 (567)
-..+..||||||.|-.+..+.............. .++..++++..... ..+..+.. ...... .-.+ -..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~---~~~~ly~~--~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLR---ADNNLYQS--VNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEc---cChhHHHH--HHhccceeeecCCCcC
Confidence 4457789999999999999998765443332222 24556665554421 11111111 111111 1111 1256
Q ss_pred HHHHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHHHh-cCCeeeeccCCccCcCCc
Q 008389 272 AKAVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAMSQ-KGFHVTHTYGLSETYGPS 350 (567)
Q Consensus 272 ~~~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~-~~~~i~~~YG~tE~~~~~ 350 (567)
.+.+++.|++++|+++.++|+.+..|++........ ..++.++++||.+++..++.+++ +|+++++.||+|| |.++
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~--~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT--IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC--CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheE
Confidence 789999999999999999999999999865544332 36899999999999999999984 5999999999999 6666
Q ss_pred ccccCCCCCCCCChhhhhhhhccCCceecccccee--EeeCCCCCccCCCCCceEEEEEeccc-ccccccCCCccchhcc
Q 008389 351 TVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLD--VIDTRTQQPVPADGKTIGEIVMSGNV-VMKGYLKNPKANEETF 427 (567)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~--i~d~~~~~~~~~~~~~~Gei~v~~~~-~~~gy~~~~~~~~~~~ 427 (567)
..|..+. ++. ..+...++ ++|++ ++ +..++++-. -....+
T Consensus 253 ~eC~~g~-lHl----------------~ed~~~vE~~ivD~~-~~---------~~~ViT~L~n~~~PlI---------- 295 (430)
T TIGR02304 253 STCRCGT-LHL----------------NEDLVHIEKQYLDEH-KR---------FVPIITDFTRTTQPIV---------- 295 (430)
T ss_pred EecCCCC-EEE----------------ccccEEEEeeEECCC-Cc---------eEEEEecCCCccceEE----------
Confidence 6653221 111 11111345 77866 22 344665532 222222
Q ss_pred cCCccccCceEEEeCC----C----cE-EEeccccceeee---Ccee--cchHHHHHHH-hcCCCceeeEEEEeecCCCC
Q 008389 428 ANGWYHTGDLGVKHPD----N----YI-EIKDRSKDIIIS---GGEN--ISSVEVENMM-YLHPAVLEASVVARADERWG 492 (567)
Q Consensus 428 ~~g~~~TGDl~~~~~~----g----~l-~~~GR~~d~i~~---~G~~--v~~~~iE~~l-~~~~~i~~~~v~~~~~~~~g 492 (567)
.|+|||++.+.++ | .+ .+.||.+|++++ +|.. ++|..++..+ ...+.|.+.+++.....
T Consensus 296 ---RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~~~--- 369 (430)
T TIGR02304 296 ---RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTGSA--- 369 (430)
T ss_pred ---eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEccCC---
Confidence 2999999988644 2 23 488999999984 4544 5999999874 46789999988765332
Q ss_pred CcceEEEEE
Q 008389 493 ESPCAFVTL 501 (567)
Q Consensus 493 ~~~~~~v~~ 501 (567)
.+.+.++.
T Consensus 370 -~l~v~~~~ 377 (430)
T TIGR02304 370 -QLELIADC 377 (430)
T ss_pred -eEEEEEEe
Confidence 36666665
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.23 E-value=1.8e-11 Score=90.20 Aligned_cols=69 Identities=49% Similarity=0.854 Sum_probs=59.3
Q ss_pred HHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeec---Cc-ccCC
Q 008389 467 EVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVF---GP-LPKT 542 (567)
Q Consensus 467 ~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~---~~-lP~t 542 (567)
|||+++.++|+|.+|+|++.+++.+|+++++++++ +. ++|+++++++|++|+.|+.+.+ .+ ||+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~-------~~----~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t 69 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL-------DE----EEIRDHLRDKLPPYMVPRRIRFVRLDEELPRT 69 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE-------HH----HHHHHHHHHHS-GGGS-SEEEEEEESSSEEBE
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe-------ee----cccccchhhhCCCcceeeEEEEccccCcCCCC
Confidence 79999999999999999999999999999999997 22 7899999999999999954443 36 9999
Q ss_pred CCcc
Q 008389 543 ATGK 546 (567)
Q Consensus 543 ~~GK 546 (567)
++||
T Consensus 70 ~~GK 73 (73)
T PF13193_consen 70 PSGK 73 (73)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 9998
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.93 E-value=7e-08 Score=94.12 Aligned_cols=226 Identities=20% Similarity=0.240 Sum_probs=131.5
Q ss_pred cCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---h-ccCCC-cEEEEecCccc-hhhhH---HHHHHhhhcCee
Q 008389 194 EWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---W-GMNEG-AVYLWTLPMFH-CNGWC---YTWSLAALCGTS 264 (567)
Q Consensus 194 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~-~~~~~-d~~~~~~p~~~-~~g~~---~~~~~~~~g~~~ 264 (567)
.+++...+.||||||.|--+.+.+..+..+....... + +.... -.++...|-.. ...+. .........++.
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 3456678899999999876777776655554333332 2 22211 22333334321 11111 111111223333
Q ss_pred EEec--cCCHHHHHHHHH----hhCceEeeeCcHHHHHHHcCCCCCCcC-CCC-chhhhhccC------CCCCH-HHHHH
Q 008389 265 ICLR--QVTAKAVYSAIA----KYGVTHFCAAPVVLNSIVNAPSEDTIL-PLP-HVVHVNTAG------AAPPP-SVLHA 329 (567)
Q Consensus 265 ~~~~--~~~~~~~~~~i~----~~~~t~l~~~p~~~~~l~~~~~~~~~~-~l~-~lr~i~~~G------~~l~~-~~~~~ 329 (567)
..+. .++...++..+. +.++..+++.|.++..++....+.... .++ ..+.+-+|| +.+++ +..+.
T Consensus 168 ~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~~ 247 (365)
T PF04443_consen 168 FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYAR 247 (365)
T ss_pred eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHHH
Confidence 3343 356666666664 457888999998777766543332221 032 334444554 44654 44555
Q ss_pred HHh-cCC----eeeeccCCccCcCCcccccCCCCCCCCChhhhhhhhccCCceeccccceeEeeCCCCCccCCCCCceEE
Q 008389 330 MSQ-KGF----HVTHTYGLSETYGPSTVCAWKPEWDSLPPETQARMKARQGVRFIGLEKLDVIDTRTQQPVPADGKTIGE 404 (567)
Q Consensus 330 ~~~-~~~----~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~d~~~~~~~~~~~~~~Ge 404 (567)
+.+ +|+ .+++.||+||.......|..... +.|. .+.|.|++|..+++.| +.|-
T Consensus 248 l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~------------------~~p~--wV~iRDp~tl~~~~~G--e~Gl 305 (365)
T PF04443_consen 248 LQEVFGVIPIENIYDMYGMTELNSQAYECGHGHF------------------HVPP--WVIIRDPETLEPLPPG--ETGL 305 (365)
T ss_pred HHHHHCCCCHHHeeeeeeccccchhheeCCCCcc------------------cCCC--eEEEECCCCCcCCCCC--CeeE
Confidence 555 577 69999999998766555432111 1222 3778899999999998 8899
Q ss_pred EEEecccccccccCCCccchhcccCCccccCceEEEeCC--------CcEEEeccccc
Q 008389 405 IVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHPD--------NYIEIKDRSKD 454 (567)
Q Consensus 405 i~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~--------g~l~~~GR~~d 454 (567)
|.+-++.... | -+...|.|+|.++.+ .++.++||.+.
T Consensus 306 i~vidl~~~s-~------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 306 IQVIDLANTS-Y------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred EEEEcccccC-C------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 9886653221 1 123669999988754 27999999774
No 134
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.59 E-value=4.9e-08 Score=100.87 Aligned_cols=88 Identities=20% Similarity=0.237 Sum_probs=58.5
Q ss_pred ceEEEEEecccccccccCCCccchhcccCCccccCceEEEeC--CC--cEEEeccccceeeeCceecchHHHHHHHhcC-
Q 008389 401 TIGEIVMSGNVVMKGYLKNPKANEETFANGWYHTGDLGVKHP--DN--YIEIKDRSKDIIISGGENISSVEVENMMYLH- 475 (567)
Q Consensus 401 ~~Gei~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~--~g--~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~- 475 (567)
+.=||+++.. .|.|+ |+.||++++.. ++ .+.|+||.+.++++.|++++-.+|+.++.+.
T Consensus 356 ~~YelviTt~---~GLyR-------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~ 419 (528)
T PF03321_consen 356 EEYELVITTN---SGLYR-------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARAL 419 (528)
T ss_dssp -EEEEEEEST---TS-SS-------------EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHH
T ss_pred CeEEEEEecc---cceee-------------eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHH
Confidence 4567888653 45554 99999999864 34 7999999999999999999999999998764
Q ss_pred ----CCceeeEEEEeecCCCCCcceEEEEEcCC
Q 008389 476 ----PAVLEASVVARADERWGESPCAFVTLKPE 504 (567)
Q Consensus 476 ----~~i~~~~v~~~~~~~~g~~~~~~v~~~~~ 504 (567)
-.+.+..+.+.........-+.++++...
T Consensus 420 ~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 420 QETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp HCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred HhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 33667777666322223345566666555
No 135
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.92 E-value=2.6e-05 Score=60.54 Aligned_cols=85 Identities=24% Similarity=0.398 Sum_probs=57.3
Q ss_pred ceecchHHHHHHHhcCCCce-eeEEEEeecCCCCCcceEEEEEcCCccc--hhhHHHHHHHHHHHHhcCCCCCCCceeec
Q 008389 460 GENISSVEVENMMYLHPAVL-EASVVARADERWGESPCAFVTLKPEVDK--SNEQQLAEDIMKFCRAKMPAYWVPKSIVF 536 (567)
Q Consensus 460 G~~v~~~~iE~~l~~~~~i~-~~~v~~~~~~~~g~~~~~~v~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~p~~i~~ 536 (567)
|.+++|.+||+++.++|++. +.+++.... ...+.+.+.|+..++... .+.+++.++|.+.+++.+.= .| .+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~-~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~l 76 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTRE-GGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVEL 76 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEE-TTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcC-CCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEE
Confidence 78999999999999999999 555554433 346789999999887532 34567778888888888752 22 4444
Q ss_pred Cc---ccCCCCccccH
Q 008389 537 GP---LPKTATGKIQK 549 (567)
Q Consensus 537 ~~---lP~t~~GKi~r 549 (567)
++ |||+ .||..|
T Consensus 77 v~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 77 VPPGTLPRS-EGKAKR 91 (96)
T ss_dssp E-TT-S----SSSS-S
T ss_pred ECCCCccCC-CCcceE
Confidence 33 9997 578765
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.88 E-value=0.00028 Score=73.47 Aligned_cols=43 Identities=9% Similarity=0.162 Sum_probs=38.7
Q ss_pred cccCceEEEeC----CCcEEEeccccceeeeCceecchHHHHHHHhc
Q 008389 432 YHTGDLGVKHP----DNYIEIKDRSKDIIISGGENISSVEVENMMYL 474 (567)
Q Consensus 432 ~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~ 474 (567)
|+.||+.++.. --.|.|+||.+.++++.|++++-.+++.++.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 99999999864 24799999999999999999999999998876
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.78 E-value=0.003 Score=65.40 Aligned_cols=44 Identities=9% Similarity=0.157 Sum_probs=38.4
Q ss_pred cccCceEEEe----CCCcEEEeccccceeeeCceecchHHHHHHHhcC
Q 008389 432 YHTGDLGVKH----PDNYIEIKDRSKDIIISGGENISSVEVENMMYLH 475 (567)
Q Consensus 432 ~~TGDl~~~~----~~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (567)
||.||+.++. ....|.|++|.+.+..+.|+|.+-.++..++.+.
T Consensus 417 YrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 417 YRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 9999999875 3468999999999999999999999998888653
No 138
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.34 E-value=0.0071 Score=62.64 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=38.1
Q ss_pred cccCceEEEeC----CCcEEEeccccceeeeCceecchHHHHHHHhcC
Q 008389 432 YHTGDLGVKHP----DNYIEIKDRSKDIIISGGENISSVEVENMMYLH 475 (567)
Q Consensus 432 ~~TGDl~~~~~----~g~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~ 475 (567)
||.||+.++.. ...|.|++|.+-+..+.|+|.+-.++..++.+.
T Consensus 423 YrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 423 YRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred EecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 99999998753 467999999999999999999999998887653
No 139
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.75 E-value=0.067 Score=53.08 Aligned_cols=94 Identities=18% Similarity=0.091 Sum_probs=77.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH--HHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA--IYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
-.+|+.|....+..+|+.|...|..+||+|.....-+.. -+-..+|+.++|+.++|+.+. ..+.-..++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 459999999999999999999999999999987762211 167789999999999999883 45666789999999999
Q ss_pred EEcccchHHHHHHHHHH
Q 008389 122 MVDQEYFKLAEEALKIM 138 (567)
Q Consensus 122 i~~~~~~~~~~~~~~~~ 138 (567)
.+.+.+.-.+.+.....
T Consensus 187 ~~tps~~l~lae~~~~~ 203 (438)
T COG1541 187 AATPSYLLYLAEEAEEE 203 (438)
T ss_pred EEChHHHHHHHHHHHHc
Confidence 99998877766655543
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=87.64 E-value=4.2 Score=41.80 Aligned_cols=83 Identities=10% Similarity=0.011 Sum_probs=63.5
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH--HHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA--IYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
.-+|..++...+...+..+...|+.+||++.+..+-+.. .....+++..+|+.++|... ......+++..++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 458999999988888988888899999999998765542 23456788999998776543 2345678899999999
Q ss_pred EEcccchH
Q 008389 122 MVDQEYFK 129 (567)
Q Consensus 122 i~~~~~~~ 129 (567)
++.....-
T Consensus 181 ~~~ps~ll 188 (445)
T TIGR03335 181 VASVFKLL 188 (445)
T ss_pred EECHHHHH
Confidence 87665433
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.53 E-value=3.9 Score=41.63 Aligned_cols=89 Identities=16% Similarity=0.076 Sum_probs=68.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChH--HHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIP--AIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
-.+|..++......++..+...|+++||++....+.+. ......+++...|+.+++++.. ..+.+...++..++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGG-QTEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCC-CHHHHHHHHHHHCCCEE
Confidence 34788888777777888888889999999887665432 2233467788999999988765 45778899999999999
Q ss_pred EEcccchHHHHH
Q 008389 122 MVDQEYFKLAEE 133 (567)
Q Consensus 122 i~~~~~~~~~~~ 133 (567)
++.+.....+.+
T Consensus 172 ~~~Ps~l~~L~~ 183 (422)
T TIGR02155 172 MVTPSYMLNLLE 183 (422)
T ss_pred EEcHHHHHHHHH
Confidence 998887665543
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=80.28 E-value=9.9 Score=34.86 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=56.1
Q ss_pred CCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeeccccCChHHHH
Q 008389 33 HPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAVNIRLNAPTIA 110 (567)
Q Consensus 33 ~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 110 (567)
.++.+|++....-.|.+.+.... ...|+.++|++. .+|-. ..+...+++++..|+..+.+ +.++++++-
T Consensus 148 ~~~D~a~l~yTsg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l 218 (227)
T TIGR03089 148 DATAPALVAGGGEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLD 218 (227)
T ss_pred CCCcceeeeccccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHH
Confidence 34666776655444555444332 556889999999 88754 34556789999999998887 699999999
Q ss_pred HHHhccCc
Q 008389 111 FLLGHSAS 118 (567)
Q Consensus 111 ~~l~~~~~ 118 (567)
..+++.++
T Consensus 219 ~~i~~~~v 226 (227)
T TIGR03089 219 QIAETERV 226 (227)
T ss_pred HHHHhhcC
Confidence 98888765
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=76.05 E-value=18 Score=37.85 Aligned_cols=96 Identities=13% Similarity=0.046 Sum_probs=70.5
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChH--HHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIP--AIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.++++.. ...+|+..+...+..+...+ +++++|++....+... .+...+++++..|+.+++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL---GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh---CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 4466776652 14688988876665554443 7889999988877543 3455678999999987765
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
+..+++.+...+++.++.++...+.....+.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 270 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLL 270 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHH
Confidence 5678899999999999999988777655543
No 144
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=72.64 E-value=31 Score=34.94 Aligned_cols=95 Identities=8% Similarity=0.076 Sum_probs=72.7
Q ss_pred CCCceeEEE---------CCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcC--ChHHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVH---------GSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAP--NIPAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~---------~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~--~~~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.||..+-+. ++.++|.-.+.+.+..++..+ |+...+++++-.| ++.-.++..+|++..|+..|.-.
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~ 308 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPA 308 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeC
Confidence 456655554 237899999999998888766 7766555555333 23445777899999999999889
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
|.+.+..+.+.+.+.++..++..+...-.
T Consensus 309 ~~f~~k~alqai~~ekcT~l~gtPtM~~D 337 (596)
T KOG1177|consen 309 PSFDPKDALQAISNEKCTTLYGTPTMFVD 337 (596)
T ss_pred CCCChHHHHHHHHhhceEEEecChHHHHH
Confidence 99999999999999999999988765443
No 145
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=70.82 E-value=36 Score=36.00 Aligned_cols=97 Identities=10% Similarity=0.019 Sum_probs=68.9
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. +..+|++.+...+..... ..++.++|++...+|-. ..+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4677887763 256898888765544433 34778899888877743 233344567778888877665
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
....++.+...+++.++..+...+.....+.
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 288 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYIL 288 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHH
Confidence 5578899999999999999998887766544
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=68.65 E-value=41 Score=35.59 Aligned_cols=83 Identities=8% Similarity=-0.001 Sum_probs=63.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCC--hHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPN--IPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
..+|++.+...+..+... .+++++|++....|- ...++..+++++..|+..+......++..+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 568888887665554443 488999999887775 344556678899999888866667788889999999999999
Q ss_pred EEcccchH
Q 008389 122 MVDQEYFK 129 (567)
Q Consensus 122 i~~~~~~~ 129 (567)
+..+....
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 88776543
No 147
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=67.64 E-value=16 Score=36.05 Aligned_cols=65 Identities=22% Similarity=0.185 Sum_probs=49.3
Q ss_pred HHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccc-----cCChHHHHHHHhccCceEEEE
Q 008389 55 CRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNI-----RLNAPTIAFLLGHSASAVIMV 123 (567)
Q Consensus 55 ~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~~~~~~vi~ 123 (567)
+..+.-.|+.+++++||-|.+ .+..|+...=+++..|+.+|.++- +.+++.++..+... .++||.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 556666677778999995554 466788888899999999999875 35688888888774 666664
No 148
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=65.79 E-value=69 Score=32.24 Aligned_cols=88 Identities=11% Similarity=0.044 Sum_probs=62.6
Q ss_pred CcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-
Q 008389 193 DEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR- 268 (567)
Q Consensus 193 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~- 268 (567)
.++.++++. -..-.+|+..+...+...... .+++.++++....+-. ...+...+++...|+..+.+.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~-~~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS-IEFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS-HHHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc-ceeeeeeccccccccccccccc
Confidence 345666655 235578888887776665544 4788999988888764 233445566666777777774
Q ss_pred cCCHHHHHHHHHhhCceEeee
Q 008389 269 QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~ 289 (567)
......+...+++.+++++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 467899999999999999996
No 149
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.52 E-value=49 Score=35.02 Aligned_cols=82 Identities=12% Similarity=0.073 Sum_probs=61.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCC--hHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPN--IPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
..+|++.+...+..+...+ +++++|++....|- ....+..+++++..|+.++......++..+...+++.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 5688988876666554443 78899998877664 345666778888899887754556778888899999999999
Q ss_pred EEcccch
Q 008389 122 MVDQEYF 128 (567)
Q Consensus 122 i~~~~~~ 128 (567)
+..+..+
T Consensus 296 ~~~P~~~ 302 (558)
T PRK12583 296 YGVPTMF 302 (558)
T ss_pred eccHHHH
Confidence 8876653
No 150
>PLN02736 long-chain acyl-CoA synthetase
Probab=64.58 E-value=75 Score=34.52 Aligned_cols=87 Identities=15% Similarity=0.054 Sum_probs=63.6
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|++.+...+...... .++.++|++...++-..-+ ....+.+...|+..+.+ +...+.++...+++.++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 457888887776665544 4899999998888764322 23345556667776655 456889999999999999999
Q ss_pred eCcHHHHHHHcC
Q 008389 289 AAPVVLNSIVNA 300 (567)
Q Consensus 289 ~~p~~~~~l~~~ 300 (567)
..+..+..+...
T Consensus 156 ~~~~~~~~~~~~ 167 (651)
T PLN02736 156 CVPQTLNTLLSC 167 (651)
T ss_pred ECHHHHHHHHHH
Confidence 998877766543
No 151
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=63.57 E-value=39 Score=35.25 Aligned_cols=85 Identities=8% Similarity=0.063 Sum_probs=63.7
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH-HHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI-YEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi 122 (567)
..+|++.+...+..... ..+++++|++....|....+ +...++++..|+..+..+. .+++.+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR-FDPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC-CCHHHHHHHHHHhCCeEEE
Confidence 45788888876666555 44888999998887754322 3344558888998877665 4889999999999999999
Q ss_pred EcccchHHHH
Q 008389 123 VDQEYFKLAE 132 (567)
Q Consensus 123 ~~~~~~~~~~ 132 (567)
+.+.....+.
T Consensus 261 ~~p~~~~~l~ 270 (521)
T PRK06187 261 AVPTIWQMLL 270 (521)
T ss_pred chHHHHHHHH
Confidence 9877665544
No 152
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=60.63 E-value=61 Score=34.50 Aligned_cols=97 Identities=9% Similarity=-0.085 Sum_probs=68.0
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH--HHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA--IYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. +..+|++.+...+.. .....++.++|++....+.... ....+++.+..|+..+...
T Consensus 203 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 203 DREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 3466776652 245788777554433 3334578899987666554432 2456778889999888777
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
...+++.+...+++.++.++...+.....+.
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7788999999999999999998887665543
No 153
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=59.32 E-value=75 Score=31.79 Aligned_cols=98 Identities=20% Similarity=0.122 Sum_probs=72.8
Q ss_pred CCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeecccc
Q 008389 34 PTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNIR 103 (567)
Q Consensus 34 p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~ 103 (567)
++.++++.. ...+|++.+...+..+.. ..+++++|++....|.+.. .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 566777652 256788888877776665 3367789999887776543 455678888889888877665
Q ss_pred CC--hHHHHHHHhccCceEEEEcccchHHHHHH
Q 008389 104 LN--APTIAFLLGHSASAVIMVDQEYFKLAEEA 134 (567)
Q Consensus 104 ~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (567)
.. +..+..+++..++..+++.+.....+...
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 54 68889999999999999998887766553
No 154
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=57.99 E-value=56 Score=27.13 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=56.1
Q ss_pred cEEEEecCc-cchhhhHHHHHHhhh-cCeeEEec-cCCHHHHHHHHHhhCceEeeeCcH------HHHHHHcCCCCCCcC
Q 008389 237 AVYLWTLPM-FHCNGWCYTWSLAAL-CGTSICLR-QVTAKAVYSAIAKYGVTHFCAAPV------VLNSIVNAPSEDTIL 307 (567)
Q Consensus 237 d~~~~~~p~-~~~~g~~~~~~~~~~-g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~p~------~~~~l~~~~~~~~~~ 307 (567)
.+++...+- .|..|.......+-. |--++.+. ...++++.+++.+++++++..+-. .+..+.+......
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~-- 82 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG-- 82 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC--
Confidence 344444443 577777654444444 44444454 457899999999999998876632 2233332222221
Q ss_pred CCCchhhhhccCCCC-----CHHHHHHHHhcCCeeeeccCC
Q 008389 308 PLPHVVHVNTAGAAP-----PPSVLHAMSQKGFHVTHTYGL 343 (567)
Q Consensus 308 ~l~~lr~i~~~G~~l-----~~~~~~~~~~~~~~i~~~YG~ 343 (567)
++.+ .++.||... +++..+.+++.|+ -..|+.
T Consensus 83 -~~~~-~i~vGG~~~~~~~~~~~~~~~l~~~G~--~~vf~~ 119 (137)
T PRK02261 83 -LGDI-LLYVGGNLVVGKHDFEEVEKKFKEMGF--DRVFPP 119 (137)
T ss_pred -CCCC-eEEEECCCCCCccChHHHHHHHHHcCC--CEEECc
Confidence 3333 366666553 3455566777673 344553
No 155
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=57.48 E-value=1.3e+02 Score=32.75 Aligned_cols=79 Identities=11% Similarity=0.018 Sum_probs=59.6
Q ss_pred eeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 212 GVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
...+|++.+...+..+... .|++++|++...+|..-- .+...+++...|+..+.+ ..+.+..+...|++.+++++
T Consensus 90 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 90 TIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 3568999987776666554 489999999999987542 233445566667776665 45789999999999999999
Q ss_pred eeCc
Q 008389 288 CAAP 291 (567)
Q Consensus 288 ~~~p 291 (567)
++..
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 9865
No 156
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=57.41 E-value=59 Score=32.97 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=61.2
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChH-HHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIP-AIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi 122 (567)
..+|++.+...+..++..+ +++++|++....+-.. ..+..+++++..|+..+..++. +.+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 5689999888777666554 7899999988776542 2234568889999988877543 3888899999999999
Q ss_pred EcccchHHH
Q 008389 123 VDQEYFKLA 131 (567)
Q Consensus 123 ~~~~~~~~~ 131 (567)
..+.....+
T Consensus 203 ~~P~~l~~l 211 (436)
T TIGR01923 203 LVPTQLNRL 211 (436)
T ss_pred eHHHHHHHH
Confidence 877655443
No 157
>PLN02565 cysteine synthase
Probab=57.22 E-value=1.4e+02 Score=29.11 Aligned_cols=89 Identities=10% Similarity=-0.028 Sum_probs=60.5
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHccC-CCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRSI-GLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
++.+-.+. .+-||++= -+..+-..+.+.|. .+|....+....+-.-+...++|..+|..++.+-|...+..-...
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 55555543 44455542 33333334445554 788554455555556666677888899999888888888888999
Q ss_pred HhccCceEEEEccc
Q 008389 113 LGHSASAVIMVDQE 126 (567)
Q Consensus 113 l~~~~~~~vi~~~~ 126 (567)
++..+++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999864
No 158
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=57.18 E-value=58 Score=34.22 Aligned_cols=88 Identities=14% Similarity=0.004 Sum_probs=67.3
Q ss_pred eeeeccHHHHHHHHHHHHHh---c--cCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCce
Q 008389 212 GVVLSHRGAYLMSLSVALIW---G--MNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVT 285 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~~---~--~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t 285 (567)
+..+|+..+...+..++..+ + ++.+|++....|-...+. ...++++..|+..... +.++..++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78899999888877776655 2 678999999999754332 3345556666666555 457899999999999999
Q ss_pred EeeeCcHHHHHHHcC
Q 008389 286 HFCAAPVVLNSIVNA 300 (567)
Q Consensus 286 ~l~~~p~~~~~l~~~ 300 (567)
+++.....+..+.+.
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999999888887544
No 159
>PLN03052 acetate--CoA ligase; Provisional
Probab=56.95 E-value=1.4e+02 Score=33.08 Aligned_cols=98 Identities=9% Similarity=0.055 Sum_probs=66.0
Q ss_pred cCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-cc
Q 008389 194 EWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQ 269 (567)
Q Consensus 194 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (567)
++.++++....+..|.+ ...+|...+...+...... .+++++|++...+|..- -.....+.+...|+..+.+ +.
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi~p~ 266 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSIADS 266 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEeeCCC
Confidence 45566554332221222 3458999887776665544 58999999999998643 2233445556667666666 45
Q ss_pred CCHHHHHHHHHhhCceEeeeCcHH
Q 008389 270 VTAKAVYSAIAKYGVTHFCAAPVV 293 (567)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~p~~ 293 (567)
+.+..+...+++.++.++++....
T Consensus 267 ~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 267 FAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCHHHHHHHHHhcCceEEEEcCcc
Confidence 788999999999999999987643
No 160
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=55.76 E-value=64 Score=33.62 Aligned_cols=85 Identities=8% Similarity=-0.065 Sum_probs=65.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi 122 (567)
..+|+..+...+..+...+ ++.++|++...+|-+.. .+..+++++..|+..+.. +...++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 5688888877766665544 67899999888876543 345678889999988755 557889999999999999999
Q ss_pred EcccchHHHH
Q 008389 123 VDQEYFKLAE 132 (567)
Q Consensus 123 ~~~~~~~~~~ 132 (567)
..+.....+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 9887765443
No 161
>PRK11761 cysM cysteine synthase B; Provisional
Probab=55.74 E-value=1.4e+02 Score=28.64 Aligned_cols=87 Identities=10% Similarity=-0.028 Sum_probs=59.2
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
++.+-.++ .+=||++ +-+..+...+.+.| +.+|+.|.. ...+-.-....++|...|..+..+-|...++.....
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 55555544 4455655 33333344444555 567777655 444555666677888899988888887777778889
Q ss_pred HhccCceEEEEcc
Q 008389 113 LGHSASAVIMVDQ 125 (567)
Q Consensus 113 l~~~~~~~vi~~~ 125 (567)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 162
>PLN03051 acyl-activating enzyme; Provisional
Probab=55.13 E-value=58 Score=33.95 Aligned_cols=95 Identities=11% Similarity=-0.077 Sum_probs=64.7
Q ss_pred CCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeecccc
Q 008389 34 PTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNIR 103 (567)
Q Consensus 34 p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~ 103 (567)
++.+|++.. +..+|++.+...+... ....++.++|++...+|-+-. .+..+++++..|+..+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 466676652 2457877765443322 234578899988766654321 134567888999998877655
Q ss_pred CChHHHHHHHhccCceEEEEcccchHHH
Q 008389 104 LNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
..++.+...+++.++.++..-+.....+
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~~~~~l 222 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPSIVKAW 222 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHHHHHHH
Confidence 6678899999999999999877766544
No 163
>PRK08308 acyl-CoA synthetase; Validated
Probab=54.67 E-value=1.1e+02 Score=30.72 Aligned_cols=96 Identities=10% Similarity=0.098 Sum_probs=68.2
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.++++.. +..+|++.+...+..+...+ ++..+|++...+|.. ..++..+++++..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 4556666552 25689998887666555443 567888887777654 344566788899999877664
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
..++..+...+++.++.+++..+.....+.
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 205 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPLMLHILG 205 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHHHHHHHH
Confidence 456788888999999999988777655443
No 164
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=53.65 E-value=1.6e+02 Score=27.89 Aligned_cols=98 Identities=22% Similarity=0.180 Sum_probs=60.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccC----ChHHHHHHHhccCce
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRL----NAPTIAFLLGHSASA 119 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~----~~~~l~~~l~~~~~~ 119 (567)
.++-.+-+ -|.-.||+.|++. |..|..++......+... +...|..+..++-.. ..+++..+++..+++
T Consensus 10 ~~iG~GHv-~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHV-MRCLTLARALHAQ----GAEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHH-HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 33333333 3677899999765 456777776655544332 357777776664432 345688899999999
Q ss_pred EEEEcccc-hHHHHHHHHHHhhhcCCCCCCCeEEEecCC
Q 008389 120 VIMVDQEY-FKLAEEALKIMEEKSNGRFKPPLLIVIGDE 157 (567)
Q Consensus 120 ~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 157 (567)
++|+|.-. ...+....+. ....++.+++.
T Consensus 83 ~vV~D~y~~~~~~~~~~k~---------~~~~l~~iDD~ 112 (279)
T TIGR03590 83 ILIVDHYGLDADWEKLIKE---------FGRKILVIDDL 112 (279)
T ss_pred EEEEcCCCCCHHHHHHHHH---------hCCeEEEEecC
Confidence 99999842 2233322221 34567777764
No 165
>PRK09274 peptide synthase; Provisional
Probab=53.61 E-value=1.1e+02 Score=32.23 Aligned_cols=80 Identities=15% Similarity=0.066 Sum_probs=56.3
Q ss_pred CeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceE
Q 008389 211 KGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTH 286 (567)
Q Consensus 211 K~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 286 (567)
+...+|+..+...+...... .+++++|++...++-.. --....+.+...|+..+.+. .....++...+++.++..
T Consensus 38 ~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 116 (552)
T PRK09274 38 AYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDA 116 (552)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCE
Confidence 33468999887776666554 47899999998887543 22334455556666666554 456788889999999999
Q ss_pred eeeCc
Q 008389 287 FCAAP 291 (567)
Q Consensus 287 l~~~p 291 (567)
++..+
T Consensus 117 ~i~~~ 121 (552)
T PRK09274 117 FIGIP 121 (552)
T ss_pred EEecc
Confidence 88765
No 166
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=52.76 E-value=60 Score=28.28 Aligned_cols=57 Identities=21% Similarity=0.277 Sum_probs=40.1
Q ss_pred chHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCC
Q 008389 464 SSVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPA 527 (567)
Q Consensus 464 ~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 527 (567)
-...|+..+.++++|.++.|+...+. .++-|.+... ....+++.+.+.+.+++..|.
T Consensus 76 ~a~~i~~~v~~~~~V~~A~vvv~~~~-----a~Vav~~~~~--~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 76 LADRIANRVKKVPGVEDATVVVTDDN-----AYVAVDLDFN--RFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHHhcCCCceEEEEEEECCE-----EEEEEEeccc--ccchhHHHHHHHHHHHHhCCC
Confidence 35678899999999999999888654 4444444422 344456667888888887775
No 167
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=52.64 E-value=26 Score=34.81 Aligned_cols=81 Identities=20% Similarity=0.148 Sum_probs=51.5
Q ss_pred hhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc-----C
Q 008389 30 ATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR-----L 104 (567)
Q Consensus 30 a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~ 104 (567)
++....+-++...+. ...+-..|...|+++||.|.+= ...+....-|+..+|+.++.++.+ .
T Consensus 35 a~~~g~~~~~~~~sg----------t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~i 101 (363)
T PF01041_consen 35 AEYFGVKYAVAVSSG----------TSALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNI 101 (363)
T ss_dssp HHHHTSSEEEEESSH----------HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB
T ss_pred HHHhCCCeEEEeCCh----------hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCc
Confidence 344445555555432 3455566667899999988884 445566777888999999998764 5
Q ss_pred ChHHHHHHHhccCceEEEEc
Q 008389 105 NAPTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~ 124 (567)
+++.+...+..-. ++|+..
T Consensus 102 d~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 102 DPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp -HHHHHHHHHTTE-EEEEEE
T ss_pred CHHHHHHHhccCc-cEEEEe
Confidence 5788888776533 555543
No 168
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=52.41 E-value=99 Score=32.83 Aligned_cols=97 Identities=8% Similarity=-0.012 Sum_probs=67.7
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeeccc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNI 102 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~ 102 (567)
.++.+|++.. +..+|++.+...+..... ..++.++|++....|-.-. .+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---hcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4577776652 246788877654444332 3478899988887774322 234567788888887655 5
Q ss_pred cCChHHHHHHHhccCceEEEEcccchHHHHH
Q 008389 103 RLNAPTIAFLLGHSASAVIMVDQEYFKLAEE 133 (567)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (567)
.+.+..+...+++.++..+...+.....+..
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 6788999999999999999998877665543
No 169
>PLN02654 acetate-CoA ligase
Probab=52.01 E-value=1.5e+02 Score=32.46 Aligned_cols=81 Identities=14% Similarity=0.067 Sum_probs=59.4
Q ss_pred eeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 212 GVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
...+|+..+...+..+... .+++++|++...+|... --....+.+...|+..+.+ ..+....+...++..++.++
T Consensus 118 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~l 196 (666)
T PLN02654 118 DASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVV 196 (666)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 3568999987776665554 58999999999988643 2223445555666666655 45788999999999999999
Q ss_pred eeCcHH
Q 008389 288 CAAPVV 293 (567)
Q Consensus 288 ~~~p~~ 293 (567)
++...+
T Consensus 197 i~~~~~ 202 (666)
T PLN02654 197 ITCNAV 202 (666)
T ss_pred EEcCcc
Confidence 987653
No 170
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=51.82 E-value=1e+02 Score=32.40 Aligned_cols=94 Identities=12% Similarity=-0.028 Sum_probs=67.4
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. ...+|++.+...+...... .++.++|++....|-. ..++..+++++..|+.++..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 4577877753 2568888887766554433 3678899888777643 234556778899999888775
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
..++..+...+++.++.++...+.....
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 292 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVD 292 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHH
Confidence 5678888999999999998887765443
No 171
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=51.52 E-value=43 Score=27.79 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=34.7
Q ss_pred HHHHHHHHHccCCCCCEEEEEcCC---hHHHHHHHHhhhhcCCeee
Q 008389 56 RRLASALCKRSIGLGCTVAIIAPN---IPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 56 ~~lA~~L~~~g~~~gd~V~l~~~~---~~~~~~~~lA~~~~G~~~v 98 (567)
+.++..|.+.|+.+++.|.+++.. +.....+++++-.+|..-+
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 478888889999999999999975 5666777788888886544
No 172
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=51.05 E-value=85 Score=26.76 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=37.3
Q ss_pred hHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCC
Q 008389 465 SVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPA 527 (567)
Q Consensus 465 ~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 527 (567)
...|...+.++|+|.++.++...+. .++-|.+.........+++..++.+.+++.-|.
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~-----A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~~dp~ 113 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY-----AYVGVDLTNGLEGSVTDELKEKVAETVKSTDNR 113 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE-----EEEEEEcCCCcchhhHHHHHHHHHHHHHhhCCC
Confidence 4567888889999999999888654 333344444433334455566666666664443
No 173
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=50.59 E-value=98 Score=34.01 Aligned_cols=87 Identities=10% Similarity=0.027 Sum_probs=64.1
Q ss_pred eeeeccHHHHHHHHHHHH---HhccCCCcEEEEecCccchhhhH-HHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceE
Q 008389 212 GVVLSHRGAYLMSLSVAL---IWGMNEGAVYLWTLPMFHCNGWC-YTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTH 286 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~ 286 (567)
-..+|++.+...+..+.. ..+++++|++...++-.. .|. ..+++...|+..+.+ ....++++...+++.++.+
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRA--EWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 356788888777666655 458899999888887543 333 344556667766655 4578899999999999999
Q ss_pred eeeCcHHHHHHHcC
Q 008389 287 FCAAPVVLNSIVNA 300 (567)
Q Consensus 287 l~~~p~~~~~l~~~ 300 (567)
++.....+..+...
T Consensus 182 li~~~~~~~~l~~~ 195 (696)
T PLN02387 182 VICDSKQLKKLIDI 195 (696)
T ss_pred EEECHHHHHHHHHH
Confidence 99998888777654
No 174
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=50.34 E-value=2.4e+02 Score=27.06 Aligned_cols=68 Identities=19% Similarity=0.098 Sum_probs=48.9
Q ss_pred HHHHHHHH----cc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcc
Q 008389 57 RLASALCK----RS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQ 125 (567)
Q Consensus 57 ~lA~~L~~----~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (567)
|+|..+.+ .| +++|+.| |=...+-.-+...+.|...|..++.+=|..-..+-..+|+.+++.+++++.
T Consensus 44 R~A~~mI~~Ae~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 44 RIALYMIEDAEKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHHHHHHHHHHHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 44444443 34 8899833 334334444556677778898888888877777788999999999999987
No 175
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=50.07 E-value=3.1e+02 Score=28.30 Aligned_cols=59 Identities=14% Similarity=0.067 Sum_probs=40.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccc-cCChHHHHHHHhccCceEEEEccc
Q 008389 67 IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNI-RLNAPTIAFLLGHSASAVIMVDQE 126 (567)
Q Consensus 67 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~-~~~~~~l~~~l~~~~~~~vi~~~~ 126 (567)
+++||+|++=-| ++..+...+-...+..+.||++. ...++.+...++.-+++++.+.+.
T Consensus 176 ~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 176 LDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred CCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 457888877555 44444455555555555555543 677899999999889999998764
No 176
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.27 E-value=1.4e+02 Score=30.85 Aligned_cols=96 Identities=11% Similarity=0.017 Sum_probs=66.9
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeeccc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNI 102 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~ 102 (567)
.++.++++.. ...+|++.+...+.... ...++.++|++....|-.-. .+..+++.+..|+..+..+
T Consensus 139 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 139 DLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 3466666542 14578887765443332 23588999999998875322 2344577778899877654
Q ss_pred cCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 103 RLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
..++..+...+++.++..+...+.....+.
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 678899999999999999999887666543
No 177
>PRK08316 acyl-CoA synthetase; Validated
Probab=49.08 E-value=1.6e+02 Score=30.64 Aligned_cols=85 Identities=11% Similarity=-0.025 Sum_probs=61.5
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++.+++++....+... ..+...+.+...|+..+.+. ......+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSD-AYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 567888887666655544 47889999988887544 33445556666676666664 46778899999999999999
Q ss_pred eCcHHHHHHH
Q 008389 289 AAPVVLNSIV 298 (567)
Q Consensus 289 ~~p~~~~~l~ 298 (567)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 9887766554
No 178
>PRK07788 acyl-CoA synthetase; Validated
Probab=48.86 E-value=1.3e+02 Score=31.85 Aligned_cols=84 Identities=12% Similarity=-0.005 Sum_probs=60.8
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|++.+...+...... .++.++|++...++-.- .-....+.+...|+..+.+. .....++...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 57888887766665554 47889999988876532 22334456666777777664 467889999999999999999
Q ss_pred CcHHHHHHH
Q 008389 290 APVVLNSIV 298 (567)
Q Consensus 290 ~p~~~~~l~ 298 (567)
.+.+...+.
T Consensus 153 ~~~~~~~~~ 161 (549)
T PRK07788 153 DDEFTDLLS 161 (549)
T ss_pred CchhHHHHH
Confidence 887766553
No 179
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=48.67 E-value=1e+02 Score=29.70 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=59.0
Q ss_pred HHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHh
Q 008389 61 ALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIME 139 (567)
Q Consensus 61 ~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 139 (567)
-|.+.|+.||.+|+|..--+.-.+...+|.+. |..+..|+... ..-+..++..++..++...+..+........++
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHhhc
Confidence 35677999999999999989999999998764 77777776553 344567899999999988877777776665554
No 180
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=48.61 E-value=1.9e+02 Score=31.14 Aligned_cols=96 Identities=13% Similarity=0.037 Sum_probs=65.1
Q ss_pred CcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-c
Q 008389 193 DEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-R 268 (567)
Q Consensus 193 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~ 268 (567)
.++.++++... ..+| ....+|++.+...+...... .+++++|++...+|... -.....+.+...|+..+.+ +
T Consensus 70 ~p~~~Al~~~~-~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEG-DEPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEeccCC
Confidence 34556655432 1122 24568999887776665544 48899999999988653 2233445566667766655 4
Q ss_pred cCCHHHHHHHHHhhCceEeeeCcH
Q 008389 269 QVTAKAVYSAIAKYGVTHFCAAPV 292 (567)
Q Consensus 269 ~~~~~~~~~~i~~~~~t~l~~~p~ 292 (567)
.+.+..+...++..++..+++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 578899999999999999988764
No 181
>PRK06164 acyl-CoA synthetase; Validated
Probab=48.50 E-value=1.2e+02 Score=31.80 Aligned_cols=95 Identities=15% Similarity=0.107 Sum_probs=70.2
Q ss_pred CCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChH-HHHHHHHhhhhcCCeeeecccc
Q 008389 34 PTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIP-AIYEAHFGVPMAGAVLNAVNIR 103 (567)
Q Consensus 34 p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~i~~~ 103 (567)
++.++++.. ...+|+..+...+..++..+ ++.++|++...+|-+- ..+..+++++..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 567777662 24678888877776666555 6789999988887642 2345678888889887765 56
Q ss_pred CChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 104 LNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
..+..+...+++.++..++..+.....+.
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 77888999999999999998877665443
No 182
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=47.37 E-value=1.4e+02 Score=31.54 Aligned_cols=85 Identities=9% Similarity=-0.012 Sum_probs=62.8
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+......+ ++.+++++....+...-+ +...+.+...|+..+.+. .....++...+++.+++.+++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 578888877766666544 788999998887765433 344556666777776664 467899999999999999999
Q ss_pred CcHHHHHHHc
Q 008389 290 APVVLNSIVN 299 (567)
Q Consensus 290 ~p~~~~~l~~ 299 (567)
....+..+.+
T Consensus 125 ~~~~~~~~~~ 134 (542)
T PRK06155 125 EAALLAALEA 134 (542)
T ss_pred ChhhHHHHHH
Confidence 8877766543
No 183
>PRK06188 acyl-CoA synthetase; Validated
Probab=47.18 E-value=1.5e+02 Score=31.08 Aligned_cols=84 Identities=5% Similarity=-0.066 Sum_probs=61.8
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMV 123 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~ 123 (567)
..+|+..+...+.... ...++..+|++....|-+-.+...+++.+..|+..+..+ ...+..+...++..++.++..
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 4577877776554433 345788899998888876555556677788898877665 567889999999999999998
Q ss_pred cccchHHH
Q 008389 124 DQEYFKLA 131 (567)
Q Consensus 124 ~~~~~~~~ 131 (567)
.+.....+
T Consensus 262 ~P~~l~~l 269 (524)
T PRK06188 262 VPTMIYAL 269 (524)
T ss_pred hHHHHHHH
Confidence 77655443
No 184
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=47.12 E-value=2e+02 Score=31.24 Aligned_cols=79 Identities=11% Similarity=0.010 Sum_probs=58.0
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+..+... .+++++|++...+|... -.....+.+...|+..+.+ +.+...++...+++.++..++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~-e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIP-QAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 468999887776666554 48999999999998753 2233445566667666655 457789999999999999998
Q ss_pred eCcH
Q 008389 289 AAPV 292 (567)
Q Consensus 289 ~~p~ 292 (567)
+...
T Consensus 192 ~~~~ 195 (652)
T TIGR01217 192 TVDG 195 (652)
T ss_pred Eccc
Confidence 7653
No 185
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=47.09 E-value=2.2e+02 Score=28.36 Aligned_cols=60 Identities=13% Similarity=0.027 Sum_probs=46.4
Q ss_pred cCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcc
Q 008389 66 SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQ 125 (567)
Q Consensus 66 g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (567)
.+.+|....+....+-.-+...++|...|..+..+-|...+..-..+++..++++++++.
T Consensus 106 ~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 106 LITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred CcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 367785444445556666677778899999988888877777778999999999999975
No 186
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=46.73 E-value=63 Score=32.29 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=34.6
Q ss_pred HHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc-----CChHHHHHHHhccCceEEEE
Q 008389 62 LCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR-----LNAPTIAFLLGHSASAVIMV 123 (567)
Q Consensus 62 L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~vi~ 123 (567)
+...++++||.|.+-.+. +.....++...|+.+++++.+ .+.+.+...++. +.++|+.
T Consensus 63 l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 344477888887774443 333345556778877777643 345666666553 5566654
No 187
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=46.65 E-value=2.2e+02 Score=30.86 Aligned_cols=80 Identities=14% Similarity=0.008 Sum_probs=58.6
Q ss_pred eeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 212 GVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
...+|+..+...+...... .+++++|++...+|... -.....+.+...|+..+.+ +.+....+...++..++.++
T Consensus 112 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~l 190 (655)
T PRK03584 112 RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVL 190 (655)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEE
Confidence 3568898887766665544 47899999999998643 2234455666677776666 45678899999999999999
Q ss_pred eeCcH
Q 008389 288 CAAPV 292 (567)
Q Consensus 288 ~~~p~ 292 (567)
++...
T Consensus 191 i~~~~ 195 (655)
T PRK03584 191 IAVDG 195 (655)
T ss_pred EEccc
Confidence 88654
No 188
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=46.22 E-value=2.1e+02 Score=30.90 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=59.3
Q ss_pred eeeeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 212 GVVLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
...+|++.+...+......+ ++.++|++...+|... -.....+.+...|+..+.+ +.+.+..+...+++.++..+
T Consensus 96 ~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~l 174 (637)
T PRK00174 96 SRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIP-EAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLV 174 (637)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 56789999887766666554 7899999998887643 2233455566677776666 45678999999999999999
Q ss_pred eeCcH
Q 008389 288 CAAPV 292 (567)
Q Consensus 288 ~~~p~ 292 (567)
++...
T Consensus 175 i~~~~ 179 (637)
T PRK00174 175 ITADE 179 (637)
T ss_pred EEcCc
Confidence 88654
No 189
>PLN03102 acyl-activating enzyme; Provisional
Probab=45.96 E-value=1.2e+02 Score=32.40 Aligned_cols=82 Identities=6% Similarity=-0.019 Sum_probs=59.1
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|.+.+...+...... .++..+|++...+|..- --....+.+...|+..+.+. ..+..++...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 58888887776666654 47899999998888543 22233445556666666553 468899999999999999998
Q ss_pred CcHHHHH
Q 008389 290 APVVLNS 296 (567)
Q Consensus 290 ~p~~~~~ 296 (567)
.+.+...
T Consensus 118 ~~~~~~~ 124 (579)
T PLN03102 118 DRSFEPL 124 (579)
T ss_pred ChhhHHH
Confidence 7765543
No 190
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=45.24 E-value=1.9e+02 Score=31.02 Aligned_cols=101 Identities=15% Similarity=0.121 Sum_probs=73.4
Q ss_pred hcCCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHH-HhhhhcCCeeeec
Q 008389 31 TVHPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAH-FGVPMAGAVLNAV 100 (567)
Q Consensus 31 ~~~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~-lA~~~~G~~~v~i 100 (567)
...||.+|.+.. +.-+||+.+...+..+...+. -++++|++..++|-.--+=-++ +++...|.+.+.
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~- 263 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL- 263 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE-
Confidence 457888888762 366999999999888888775 4789999999999653332222 444444444333
Q ss_pred cccCChHHHHHHHhccCceEEEEcccchHHHHHHH
Q 008389 101 NIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEAL 135 (567)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 135 (567)
...++..+..-+...+|.+++.-+...+.+....
T Consensus 264 -~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 264 -FKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred -ecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 3456888999999999999999888877776654
No 191
>PRK07529 AMP-binding domain protein; Validated
Probab=45.23 E-value=1.6e+02 Score=31.94 Aligned_cols=95 Identities=9% Similarity=0.017 Sum_probs=60.9
Q ss_pred cCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-cc
Q 008389 194 EWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQ 269 (567)
Q Consensus 194 ~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~ 269 (567)
++.++++....+.. ..+...+|++.+...+...... .+++++|++...+|-..-+ ....+.+...| ..+.+ +.
T Consensus 39 p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~G-i~~pi~~~ 115 (632)
T PRK07529 39 PDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAG-IANPINPL 115 (632)
T ss_pred CCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhC-EEEeCCCc
Confidence 34555554432211 1234578999887766665544 4789999999999865422 23334444444 33333 44
Q ss_pred CCHHHHHHHHHhhCceEeeeCc
Q 008389 270 VTAKAVYSAIAKYGVTHFCAAP 291 (567)
Q Consensus 270 ~~~~~~~~~i~~~~~t~l~~~p 291 (567)
..++++...+++.++..++...
T Consensus 116 ~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 116 LEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CCHHHHHHHHHhcCCcEEEEeC
Confidence 6789999999999999999864
No 192
>PRK07638 acyl-CoA synthetase; Validated
Probab=45.22 E-value=1.3e+02 Score=31.11 Aligned_cols=85 Identities=6% Similarity=-0.060 Sum_probs=61.9
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi 122 (567)
..+|.+.+...+...+. ..+++++|++....+-... ++...+..+..|+..+.. +..++..+...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 45777777665554433 3478899998876655433 355667778889987755 567889999999999999999
Q ss_pred EcccchHHHH
Q 008389 123 VDQEYFKLAE 132 (567)
Q Consensus 123 ~~~~~~~~~~ 132 (567)
..+.....+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 9887765544
No 193
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=44.05 E-value=2.3e+02 Score=30.53 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=57.5
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (567)
-.+|++.+...+...... .+++++|++...+|..- -.....+.+...|+..+.+ ..+...++...++..++.+++
T Consensus 82 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~-e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 160 (628)
T TIGR02316 82 RTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIA-EAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIV 160 (628)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 458899887766655544 48999999999998753 2233455566667776665 457788999999999999998
Q ss_pred eCc
Q 008389 289 AAP 291 (567)
Q Consensus 289 ~~p 291 (567)
+..
T Consensus 161 ~~~ 163 (628)
T TIGR02316 161 SAD 163 (628)
T ss_pred ECC
Confidence 864
No 194
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=43.95 E-value=3.4e+02 Score=27.06 Aligned_cols=72 Identities=15% Similarity=0.082 Sum_probs=52.6
Q ss_pred HHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchH
Q 008389 55 CRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK 129 (567)
Q Consensus 55 ~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (567)
+..+-..|.+.+.++| .|+--..| ....+.||+.++|..+..+=|...+......++..++.+++......+
T Consensus 101 a~~~~~kla~~~~~~g-ViasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 101 AGNALQKLAKQQKKAG-VIASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred HHHHHHHHHHhhhcCc-eEEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 3333344444333444 45554454 456678999999999999999999999999999999999998776544
No 195
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=43.83 E-value=2.8e+02 Score=26.49 Aligned_cols=90 Identities=10% Similarity=-0.072 Sum_probs=56.6
Q ss_pred CceeEEECCc--cccHHHHHHHHHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHH
Q 008389 35 TRTSVVHGST--RYTWLQTYQRCRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAF 111 (567)
Q Consensus 35 ~~~a~~~~~~--~~Ty~el~~~~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 111 (567)
-++.+-.++. +-|+++ +.+..+.....+.| +.+|++|. ....+-.-....++|.+.|..+..+-|...++....
T Consensus 21 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKD--RIALNMIWDAEKRGLLKPGKTIV-EPTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred ceEEEEEcccCCCCcchH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 3555555443 334443 22222333344455 47777764 444444555566677789998888877666666688
Q ss_pred HHhccCceEEEEcccc
Q 008389 112 LLGHSASAVIMVDQEY 127 (567)
Q Consensus 112 ~l~~~~~~~vi~~~~~ 127 (567)
.++..++++++++...
T Consensus 98 ~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 98 LLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCEEEEECCCC
Confidence 8999999999998764
No 196
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=43.52 E-value=1.6e+02 Score=32.52 Aligned_cols=92 Identities=9% Similarity=0.046 Sum_probs=64.2
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCC--hHHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPN--IPAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. +..+|++.+...+..+... .++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 4567777652 2568888887766655443 378899998888775 3344456788888999888665
Q ss_pred ccCChHHHHHHHhccCceEEEEcccc
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEY 127 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (567)
.......+...+++.++..+...+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44455667778888899888766544
No 197
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=43.24 E-value=2.2e+02 Score=29.95 Aligned_cols=81 Identities=11% Similarity=0.006 Sum_probs=57.1
Q ss_pred CeeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceE
Q 008389 211 KGVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTH 286 (567)
Q Consensus 211 K~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 286 (567)
+...+|+..+...+...... .++++++++...++...-+ ....+.+...|+..+.+. .....++...++..++..
T Consensus 52 ~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (547)
T PRK13295 52 APRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKV 130 (547)
T ss_pred ccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceE
Confidence 34578898887766665554 4789999999888765433 334455556666666553 457788999999999999
Q ss_pred eeeCcH
Q 008389 287 FCAAPV 292 (567)
Q Consensus 287 l~~~p~ 292 (567)
++....
T Consensus 131 li~~~~ 136 (547)
T PRK13295 131 LVVPKT 136 (547)
T ss_pred EEEecc
Confidence 887653
No 198
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=43.00 E-value=3.6e+02 Score=27.10 Aligned_cols=67 Identities=10% Similarity=0.073 Sum_probs=45.8
Q ss_pred HHHHHHHHHc---cCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEc
Q 008389 56 RRLASALCKR---SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 56 ~~lA~~L~~~---g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~ 124 (567)
+.+|..+.+. .+.+.+-|.+-..-..-+..++.|++.-|=.++..+|.++.- ...+...+++.+.+.
T Consensus 72 eaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y--~~~~~~~gg~~v~v~ 141 (393)
T COG0436 72 EAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSY--EAAVKLAGGKPVPVP 141 (393)
T ss_pred HHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCH--HHHHHhcCCEEEEEe
Confidence 4556666543 455666587777777888888999999997777777777653 345566666666654
No 199
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=42.96 E-value=3.6e+02 Score=27.03 Aligned_cols=107 Identities=10% Similarity=-0.002 Sum_probs=64.8
Q ss_pred ccCHHHHHhhhhhcCCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCC--CCCEEEEEcCChH--HHHH
Q 008389 19 ALTPLWFLDRAATVHPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIG--LGCTVAIIAPNIP--AIYE 85 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~--~gd~V~l~~~~~~--~~~~ 85 (567)
..++.++++-..+++-+..+++.. +..+|++.+...+..+++.+ ++. +.|++..++|-.- .+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~ 155 (386)
T TIGR02372 79 RRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLF 155 (386)
T ss_pred hccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHH
Confidence 345555555555555455555542 26689999988888777765 443 3456776766542 3344
Q ss_pred HHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 86 AHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 86 ~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
.++..+..|+.++... ..++..+...++.. .+++..+.....+
T Consensus 156 ~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 156 SCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHH
Confidence 5566778898877664 45665555555432 5666666655443
No 200
>PLN02246 4-coumarate--CoA ligase
Probab=42.89 E-value=1.5e+02 Score=31.23 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=58.3
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
-.+|+..+...+...... .+++++|++....+-.. ..+...+.+...|+..+.+. .....++...++..++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 358888887766665554 47899999998887542 22234445555566665553 46778899999999999998
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
........+
T Consensus 128 ~~~~~~~~~ 136 (537)
T PLN02246 128 TQSCYVDKL 136 (537)
T ss_pred EccchHHHH
Confidence 877655544
No 201
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=42.76 E-value=1.7e+02 Score=30.45 Aligned_cols=95 Identities=13% Similarity=-0.070 Sum_probs=67.0
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH--HHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA--IYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.++++.. +..+|++.+...+.... ....+++++|++....|-... +...+++.+..|+.++..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3567777652 25678887766544322 233488999988877765443 3445677788898888777
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFK 129 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (567)
...++..+...+++.++.++...+....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 264 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYA 264 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHH
Confidence 6677889999999999999998876543
No 202
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=42.38 E-value=87 Score=31.25 Aligned_cols=56 Identities=18% Similarity=0.166 Sum_probs=33.4
Q ss_pred HccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc-----CChHHHHHHHhccCceEEEE
Q 008389 64 KRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR-----LNAPTIAFLLGHSASAVIMV 123 (567)
Q Consensus 64 ~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~vi~ 123 (567)
..++++||.|.+-.+... ....++...|+.++.++.+ .+.+.+...+.. +.++|+.
T Consensus 65 ~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 65 LLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred HhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 346778888777554433 3334556677777776532 446677776654 5566653
No 203
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=42.36 E-value=3.4e+02 Score=27.43 Aligned_cols=64 Identities=14% Similarity=-0.066 Sum_probs=50.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeec--cccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 67 IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAV--NIRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 67 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i--~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
--+|-+|+.+.+-.+...+.+..+...|+.+... ||....++....|...+..++-...+..+.
T Consensus 29 pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~e 94 (406)
T TIGR00936 29 PLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEE 94 (406)
T ss_pred CCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHH
Confidence 3368899999999999999999999999976655 777777888888888888877654444333
No 204
>PLN02550 threonine dehydratase
Probab=42.27 E-value=4.3e+02 Score=28.24 Aligned_cols=101 Identities=8% Similarity=0.002 Sum_probs=61.6
Q ss_pred hhhhcCCCceeEEECCccc--cHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCC
Q 008389 28 RAATVHPTRTSVVHGSTRY--TWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLN 105 (567)
Q Consensus 28 ~~a~~~p~~~a~~~~~~~~--Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~ 105 (567)
+..+....++.+-.++.+- ||++ +-...++.+ |.+....+| .|+ +..+=....+.++|.++|..+..+-|...
T Consensus 117 ~LS~~~g~~IylK~E~lqptGSFK~-RGA~n~I~~-L~~e~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~t 191 (591)
T PLN02550 117 KLSERLGVKVLLKREDLQPVFSFKL-RGAYNMMAK-LPKEQLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTT 191 (591)
T ss_pred HhhHhhCCEEEEEEcCCCCCCcHHH-HHHHHHHHH-HHHhcCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 3333344456665555333 4554 222233332 333344566 444 34455555667789999998888878777
Q ss_pred hHHHHHHHhccCceEEEEcccchHHHHH
Q 008389 106 APTIAFLLGHSASAVIMVDQEYFKLAEE 133 (567)
Q Consensus 106 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (567)
+..-...++..++.++++...+.+....
T Consensus 192 p~~Kv~~~r~~GAeVvl~g~~~dea~~~ 219 (591)
T PLN02550 192 PEIKWQSVERLGATVVLVGDSYDEAQAY 219 (591)
T ss_pred CHHHHHHHHHcCCEEEEeCCCHHHHHHH
Confidence 7777788899999999998765444333
No 205
>PRK10877 protein disulfide isomerase II DsbC; Provisional
Probab=41.83 E-value=2.5e+02 Score=25.76 Aligned_cols=48 Identities=15% Similarity=0.040 Sum_probs=27.1
Q ss_pred CceEEEeCCCcEEEeccccceeeeCce---ecchHHHHHHHhcCCCceeeEEEEee
Q 008389 435 GDLGVKHPDNYIEIKDRSKDIIISGGE---NISSVEVENMMYLHPAVLEASVVARA 487 (567)
Q Consensus 435 GDl~~~~~~g~l~~~GR~~d~i~~~G~---~v~~~~iE~~l~~~~~i~~~~v~~~~ 487 (567)
|.+.|.++||.+.+.|..=| ..+. .+.-..++..+..++ .+..+++.+
T Consensus 55 ~~i~Y~~~dg~y~i~G~l~d---~~~~~~~~~t~~~~~~~~~~l~--~~~i~~g~~ 105 (232)
T PRK10877 55 SGVLYITDDGKHIIQGPMYD---VSGTAPVNVTNQLLLKKLNALE--KEMIVYKAP 105 (232)
T ss_pred CeEEEEcCCCCEEEeeeeEe---cCCCCCCChHHHHHHHHHHhhh--hhcEEecCC
Confidence 55888999999999987544 3332 332222333444444 344555544
No 206
>PRK05857 acyl-CoA synthetase; Validated
Probab=41.73 E-value=2e+02 Score=30.28 Aligned_cols=80 Identities=13% Similarity=-0.041 Sum_probs=57.5
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++++++++...++... ..+...+++...|+..+.+. ......+...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 458999887776666554 47889999998887543 22344555566666666664 46788899999999999988
Q ss_pred eCcHH
Q 008389 289 AAPVV 293 (567)
Q Consensus 289 ~~p~~ 293 (567)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 87754
No 207
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=41.67 E-value=1.8e+02 Score=34.11 Aligned_cols=97 Identities=9% Similarity=0.072 Sum_probs=69.8
Q ss_pred cCCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeec
Q 008389 32 VHPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 32 ~~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 100 (567)
..+|.+|++.. +..+|++.+...+...... .++.++|++...+|-. ..+....++.+..|+..+..
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~ 855 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYH 855 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEe
Confidence 34677777752 2568888887766655443 3678899887776643 33344467778889888877
Q ss_pred cccCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 101 NIRLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
+...+++.+...+++.++..+...+.....+
T Consensus 856 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 856 PDPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 6667889999999999999999887765543
No 208
>PLN03013 cysteine synthase
Probab=41.27 E-value=3.2e+02 Score=27.83 Aligned_cols=81 Identities=11% Similarity=0.001 Sum_probs=55.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi 122 (567)
-+-|+++ +-+..+-....+.| +.+|....+....+-.-+...++|...|..++.+-|...+++....++..++++++
T Consensus 149 PtGSfKd--R~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 149 PCCSVKD--RIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred CccccHH--HHHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 4455665 22333333333445 57885545555556666666778888998888887877788888999999999999
Q ss_pred Eccc
Q 008389 123 VDQE 126 (567)
Q Consensus 123 ~~~~ 126 (567)
++..
T Consensus 227 v~~~ 230 (429)
T PLN03013 227 TDPA 230 (429)
T ss_pred ECCC
Confidence 9765
No 209
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=41.00 E-value=2.1e+02 Score=30.12 Aligned_cols=84 Identities=11% Similarity=0.044 Sum_probs=59.4
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++.+++++...++-...+ +...+.++..|+..+.+. .....++...+++.++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 368888887776665554 4788999998887765422 234456666777666554 35678899999999999998
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
..+..+..+
T Consensus 133 ~~~~~~~~~ 141 (546)
T PLN02330 133 TNDTNYGKV 141 (546)
T ss_pred EccchhhhH
Confidence 877665544
No 210
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=40.06 E-value=1.6e+02 Score=28.52 Aligned_cols=88 Identities=11% Similarity=0.043 Sum_probs=57.0
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLL 113 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l 113 (567)
++.+-.+. .+-|+++- .+..+-..+.+.|..+++.|.... .+-.-..+.++|...|..++.+-|...+......+
T Consensus 17 ~i~~K~E~~nptGS~K~R--~a~~~l~~a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l 93 (316)
T cd06448 17 NVFLKLENLQPSGSFKIR--GIGHLCQKSAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKL 93 (316)
T ss_pred eEEEEeccCCCcCChHHH--HHHHHHHHHHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 45555433 44555542 122222223333434466665544 45555666788889999988888877778888999
Q ss_pred hccCceEEEEccc
Q 008389 114 GHSASAVIMVDQE 126 (567)
Q Consensus 114 ~~~~~~~vi~~~~ 126 (567)
+..++++++++..
T Consensus 94 ~~~GA~v~~~~~~ 106 (316)
T cd06448 94 RDEGATVVVHGKV 106 (316)
T ss_pred HHcCCEEEEECCc
Confidence 9999999999876
No 211
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=40.00 E-value=54 Score=31.17 Aligned_cols=55 Identities=5% Similarity=0.047 Sum_probs=44.0
Q ss_pred ccccHHHHHHH-----HHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee
Q 008389 44 TRYTWLQTYQR-----CRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN 98 (567)
Q Consensus 44 ~~~Ty~el~~~-----~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 98 (567)
..+.|.++... ...+...|.+.|+.+++.|.++|.++.....+++++-.+|..-+
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~v 259 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVPNV 259 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCc
Confidence 35777777632 46677777888999999999999999999999999988998533
No 212
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=39.87 E-value=1.8e+02 Score=32.27 Aligned_cols=99 Identities=11% Similarity=0.144 Sum_probs=67.9
Q ss_pred eeeccHHHHHHHHHHHHH------hccCCC-----------cEEEEecCccchhhhH-HHHHHhhhcCeeEEe-ccCCHH
Q 008389 213 VVLSHRGAYLMSLSVALI------WGMNEG-----------AVYLWTLPMFHCNGWC-YTWSLAALCGTSICL-RQVTAK 273 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~------~~~~~~-----------d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~ 273 (567)
..+|++.+...+..+... .|+.++ |++....+-. ..|. ..+++...|+..+.+ ..+.++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~--~ew~~~~lA~~~~Gav~Vpl~~~~~~~ 167 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS--INWLVADLACMLSGVTTLVMHSKFSID 167 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC--HHHHHHHHHHHHcCCeEEEecCCCCHH
Confidence 467888877766655443 267777 7887777653 3333 455566677777766 567899
Q ss_pred HHHHHHHhhCceEeeeCcHHHHHHHcCCCCCCcCCCCchhhhhcc
Q 008389 274 AVYSAIAKYGVTHFCAAPVVLNSIVNAPSEDTILPLPHVVHVNTA 318 (567)
Q Consensus 274 ~~~~~i~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~i~~~ 318 (567)
++...+++-++.+++..+..+..+...... ++.++.++.-
T Consensus 168 el~~il~~s~~~~lv~~~~~~~~l~~~~~~-----~~~l~~ii~~ 207 (746)
T PTZ00342 168 VIVDILNETKLEWLCLDLDLVEGLLERKNE-----LPHLKKLIIL 207 (746)
T ss_pred HHHHHHhcCCCCEEEEcHHHHHHHHHhhcc-----CCCceEEEEE
Confidence 999999999999999988888777654321 4455555443
No 213
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=39.81 E-value=3e+02 Score=29.67 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=56.9
Q ss_pred eeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 212 GVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
.-.+|.+.+...+...... .+++++|++...+|... -.....+.+...|+..+.+ +.+....+...+++.++..+
T Consensus 82 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~l 160 (629)
T PRK10524 82 ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLI 160 (629)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEE
Confidence 3467888887766555544 48999999999988643 2233445556667666655 45778899999999999999
Q ss_pred eeCc
Q 008389 288 CAAP 291 (567)
Q Consensus 288 ~~~p 291 (567)
++..
T Consensus 161 i~~~ 164 (629)
T PRK10524 161 VSAD 164 (629)
T ss_pred EEcc
Confidence 8765
No 214
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=39.56 E-value=70 Score=25.36 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=33.2
Q ss_pred HHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 56 RRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 56 ~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
..+...+.+.++.+++.|.++|..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666777889999999999999988877777777888874
No 215
>PRK08162 acyl-CoA synthetase; Validated
Probab=39.53 E-value=1.7e+02 Score=30.83 Aligned_cols=83 Identities=10% Similarity=0.022 Sum_probs=60.7
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+......+ ++.++|++....+-.. -.+...+.++..|+..+.+. .....++...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIP-AMVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCch-HHHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 588988877766666554 7899999998887643 22334455556666666553 467899999999999999999
Q ss_pred CcHHHHHH
Q 008389 290 APVVLNSI 297 (567)
Q Consensus 290 ~p~~~~~l 297 (567)
.+.++..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 88776554
No 216
>PRK07514 malonyl-CoA synthase; Validated
Probab=39.25 E-value=2.1e+02 Score=29.57 Aligned_cols=84 Identities=10% Similarity=-0.014 Sum_probs=59.7
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++.++|++....+... -.....+.+...|+..+.+. ......+...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 468888876665555544 47899999988887652 22334455566676666554 46778899999999999999
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887766544
No 217
>PRK06381 threonine synthase; Validated
Probab=39.10 E-value=3.2e+02 Score=26.42 Aligned_cols=105 Identities=10% Similarity=-0.030 Sum_probs=63.6
Q ss_pred ccCHHHHHhhhhhcCC-CceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 19 ALTPLWFLDRAATVHP-TRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p-~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
..|..-.+++..+... .++.+-.++ .+=||++ +.+..+...+.+.|. +.|. ....+-.-..+.++|...|.
T Consensus 14 g~TPL~~~~~l~~~~G~~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~lv-~aSsGN~g~alA~~aa~~G~ 87 (319)
T PRK06381 14 GGTPLLRARKLEEELGLRKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGIT-VGTCGNYGASIAYFARLYGL 87 (319)
T ss_pred CCCceeEhHhhHHhcCCceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEEE-EeCCcHHHHHHHHHHHHcCC
Confidence 3344333444333333 366666654 3444444 222333333445442 3443 35556666777788889999
Q ss_pred eeeeccccCChHHHHHHHhccCceEEEEcccchH
Q 008389 96 VLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK 129 (567)
Q Consensus 96 ~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (567)
.+..+-|...+......++..++++++++.++..
T Consensus 88 ~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~~ 121 (319)
T PRK06381 88 KAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYEE 121 (319)
T ss_pred cEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHHH
Confidence 8888777666666678999999999999876443
No 218
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=38.82 E-value=2.5e+02 Score=27.57 Aligned_cols=116 Identities=14% Similarity=0.029 Sum_probs=76.4
Q ss_pred cCHHHHHhhhhhcCCCceeEEECCccccHH-HHHHHHHHHHHHHHHc-cCCCCCEEEEEcCChHHHHHHHHhhhhcCCee
Q 008389 20 LTPLWFLDRAATVHPTRTSVVHGSTRYTWL-QTYQRCRRLASALCKR-SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVL 97 (567)
Q Consensus 20 ~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~-el~~~~~~lA~~L~~~-g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 97 (567)
.|.........++...++.+-.++-+.|.. .++-.-+++.+ |... .-..| .|+--..|+.+- ..|||-++|...
T Consensus 25 ~TPL~~s~~Ls~~~g~~v~lK~E~lQ~~gSFK~RGA~n~i~~-Ls~e~~~~~g-ViaaSaGNHaQG--vA~aa~~lGi~a 100 (347)
T COG1171 25 PTPLQRSPSLSERLGAEIYLKRENLQPVGSFKIRGAYNKLSS-LSEEEERAAG-VIAASAGNHAQG--VAYAAKRLGIKA 100 (347)
T ss_pred CCCcccchhhHHhhCceEEEeeccCcccccchhhhHHHHHHh-cChhhhhcCc-eEEecCCcHHHH--HHHHHHHhCCCE
Confidence 444444445555667788887766332222 33334444444 4422 22333 566666666655 468999999999
Q ss_pred eeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHHHHh
Q 008389 98 NAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALKIME 139 (567)
Q Consensus 98 v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 139 (567)
+.+=|..++..-..-++..++.+++.+..+.+......+...
T Consensus 101 ~IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a~~~a~ 142 (347)
T COG1171 101 TIVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAAEELAE 142 (347)
T ss_pred EEEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHHH
Confidence 999899999888899999999999999988766665554443
No 219
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=38.60 E-value=3.5e+02 Score=25.70 Aligned_cols=65 Identities=15% Similarity=0.017 Sum_probs=48.1
Q ss_pred HHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccc
Q 008389 62 LCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEY 127 (567)
Q Consensus 62 L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (567)
+.+.| .++|+.|.. ...+-.-..+.++|.+.|..++.+-|..........++..++++++++...
T Consensus 44 a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 44 AEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 33444 335666554 555666677778888999988888777666777789999999999998765
No 220
>PRK07787 acyl-CoA synthetase; Validated
Probab=38.57 E-value=2.3e+02 Score=29.07 Aligned_cols=95 Identities=11% Similarity=0.021 Sum_probs=66.5
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCC--hHHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPN--IPAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. ...+|++.+...+..++.. .++.++|++....|- ...++..+++++..|+.++...
T Consensus 126 ~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 126 DPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 4566666652 2457888887766655544 367889987666553 2345566888999999887664
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
..++..+...++ .++..+.+.+.....+.
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 567888999999 89998888776554433
No 221
>PRK13388 acyl-CoA synthetase; Provisional
Probab=38.30 E-value=3.6e+02 Score=28.42 Aligned_cols=83 Identities=8% Similarity=-0.126 Sum_probs=58.7
Q ss_pred eeccHHHHHHHHHHHHHh---cc-CCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 214 VLSHRGAYLMSLSVALIW---GM-NEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~-~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
.+|+..+...+......+ ++ .+++++...++....+ ....+.+...|+..+.+. .....++...+++.+++.++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 678888887766666544 67 6889988888754432 234455566677666664 45678899999999999999
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
+.......+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 877655443
No 222
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=38.08 E-value=50 Score=29.18 Aligned_cols=35 Identities=23% Similarity=0.316 Sum_probs=30.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcC
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAP 78 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~ 78 (567)
.-+||.++.+.+.++|..+.+.|.+|.-.||+.-.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaiaRG 39 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIARG 39 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCC
Confidence 45899999999999999999999999877776443
No 223
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=38.00 E-value=2.3e+02 Score=30.83 Aligned_cols=85 Identities=18% Similarity=0.016 Sum_probs=61.1
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|++.+...+...... .++.++|++...++-..- -+...+.+...|+..+.+ +.....++...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 458999887776666554 478999999988876432 223345556667666655 446788999999999999999
Q ss_pred eCcHHHHHHH
Q 008389 289 AAPVVLNSIV 298 (567)
Q Consensus 289 ~~p~~~~~l~ 298 (567)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776665553
No 224
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.76 E-value=2e+02 Score=30.61 Aligned_cols=83 Identities=12% Similarity=-0.025 Sum_probs=59.2
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .+++.+|++....+.... -+...+.+...|+..+.+ +......+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 47888887766665554 478899999988876443 223445555566666655 4567899999999999999998
Q ss_pred CcHHHHHH
Q 008389 290 APVVLNSI 297 (567)
Q Consensus 290 ~p~~~~~l 297 (567)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 225
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=37.56 E-value=3.8e+02 Score=25.68 Aligned_cols=88 Identities=14% Similarity=-0.021 Sum_probs=57.0
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
++.+-.++ .+-||++ +.+..+...+.+.| +.+|+.|. ....+-.-..+.++|...|..+..+-|...+..-...
T Consensus 23 ~i~~K~E~~~ptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~ 99 (299)
T TIGR01136 23 RVLAKLEGRNPSGSVKD--RIALSMIEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKL 99 (299)
T ss_pred eEEEEEcccCCCCCccH--HHHHHHHHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 45554443 3345554 22333333344445 46777664 4555555566667788899988888787666667788
Q ss_pred HhccCceEEEEccc
Q 008389 113 LGHSASAVIMVDQE 126 (567)
Q Consensus 113 l~~~~~~~vi~~~~ 126 (567)
++..++++++++..
T Consensus 100 ~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 100 LRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999865
No 226
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=37.25 E-value=1.9e+02 Score=30.45 Aligned_cols=96 Identities=14% Similarity=0.012 Sum_probs=67.7
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH---HHHHHhhhhcCCeeeec
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI---YEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~---~~~~lA~~~~G~~~v~i 100 (567)
.++.+|++.. +..+|.+.+...+...... .++.++|++...+|-.-.+ ....++++..|+..+..
T Consensus 180 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 180 PADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEI---CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHh---cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 4566777652 2568888888876665443 4788999988887754332 22467888889987754
Q ss_pred cccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 101 NIRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
+..++......+++.++.++...+.....+.
T Consensus 257 -~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 287 (536)
T PRK10946 257 -PDPSATLCFPLIEKHQVNVTALVPPAVSLWL 287 (536)
T ss_pred -CCCCHHHHHHHHHHhCCcEEEeChHHHHHHH
Confidence 4556777888999999999998777655543
No 227
>PRK10717 cysteine synthase A; Provisional
Probab=36.96 E-value=3.9e+02 Score=26.07 Aligned_cols=62 Identities=15% Similarity=0.041 Sum_probs=46.5
Q ss_pred Hcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEccc
Q 008389 64 KRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQE 126 (567)
Q Consensus 64 ~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (567)
+.| +++|+.|.. +..+-.-..+.++|.++|..+..+-|...++.....++..++++++++..
T Consensus 57 ~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 57 KRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 344 467776555 55555666667788889988888777766777888999999999999863
No 228
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.93 E-value=2.5e+02 Score=29.05 Aligned_cols=83 Identities=14% Similarity=0.074 Sum_probs=59.5
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+...... .++++++++....+... ......+.++..|+..+.+. .....++...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 47778776666555544 47889999998887653 33344566666777766664 456788999999999999998
Q ss_pred CcHHHHHH
Q 008389 290 APVVLNSI 297 (567)
Q Consensus 290 ~p~~~~~l 297 (567)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 87766554
No 229
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=36.81 E-value=2.1e+02 Score=34.21 Aligned_cols=96 Identities=10% Similarity=-0.002 Sum_probs=69.6
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH-HHHHHhhhhcCCeeeeccc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI-YEAHFGVPMAGAVLNAVNI 102 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~i~~ 102 (567)
.|+.+|++.. +..+|.+.+.+....... ..++.++|++....+-+.+. +.-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN---HYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4667777652 256888877665544433 34889999999988877654 3446778889999887765
Q ss_pred --cCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 103 --RLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 103 --~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
...++.+...+++.++.++...+.....+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 34678899999999999998877665544
No 230
>PRK13383 acyl-CoA synthetase; Provisional
Probab=36.63 E-value=2.2e+02 Score=29.69 Aligned_cols=84 Identities=14% Similarity=0.049 Sum_probs=59.2
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+......+ ++.++|++...++..- ......+.+...|+..+.+. .....++...+++.++..+++
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 478888776666655544 7889999888887533 22334445556666666554 467899999999999999999
Q ss_pred CcHHHHHHH
Q 008389 290 APVVLNSIV 298 (567)
Q Consensus 290 ~p~~~~~l~ 298 (567)
.+.+...+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 887766543
No 231
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=36.28 E-value=3.6e+02 Score=28.01 Aligned_cols=83 Identities=8% Similarity=-0.041 Sum_probs=58.0
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++.++|++....+...-+ ....+.+...|+..+.+ +...+..+...+++.++..++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 46788876666655543 4788999999887764422 23344555566665555 3467899999999999999999
Q ss_pred CcHHHHHH
Q 008389 290 APVVLNSI 297 (567)
Q Consensus 290 ~p~~~~~l 297 (567)
.+.....+
T Consensus 116 ~~~~~~~~ 123 (517)
T PRK08008 116 SAQFYPMY 123 (517)
T ss_pred ecchhHHH
Confidence 88765443
No 232
>PLN02614 long-chain acyl-CoA synthetase
Probab=36.28 E-value=2.6e+02 Score=30.56 Aligned_cols=84 Identities=14% Similarity=0.024 Sum_probs=60.4
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhH-HHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWC-YTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
..+|+..+...+...... .++.++|++...++-.. .|. ..+.+...|+..+.+ +...+.++...+++.++.++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~--e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~v 155 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSP--EWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIV 155 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEE
Confidence 457888887766665544 48899999998888653 333 344555666666655 45678999999999999999
Q ss_pred eeCcHHHHHHH
Q 008389 288 CAAPVVLNSIV 298 (567)
Q Consensus 288 ~~~p~~~~~l~ 298 (567)
+.....+..+.
T Consensus 156 i~~~~~~~~~~ 166 (666)
T PLN02614 156 FVEEKKISELF 166 (666)
T ss_pred EECHHHHHHHH
Confidence 98876665543
No 233
>PLN00011 cysteine synthase
Probab=36.12 E-value=2.4e+02 Score=27.48 Aligned_cols=65 Identities=15% Similarity=-0.022 Sum_probs=48.2
Q ss_pred HHHHcc-CCCC-CEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEccc
Q 008389 61 ALCKRS-IGLG-CTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQE 126 (567)
Q Consensus 61 ~L~~~g-~~~g-d~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (567)
...+.| +.+| +.|.. ...+-.-....++|..+|..+..+-|...++....+++..++++++++..
T Consensus 58 ~a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 58 DAEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 333444 6777 55544 55566666677788889998888877766677888999999999999864
No 234
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=36.07 E-value=2.5e+02 Score=29.36 Aligned_cols=96 Identities=13% Similarity=0.007 Sum_probs=66.7
Q ss_pred cCCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH--HH-HHHhhhhcCCeeee
Q 008389 32 VHPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI--YE-AHFGVPMAGAVLNA 99 (567)
Q Consensus 32 ~~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~--~~-~~lA~~~~G~~~v~ 99 (567)
..++++|++.. ...+|...+...+..... ..++.++|++...+|....+ .. ..++++..|+..+.
T Consensus 180 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~ 256 (527)
T TIGR02275 180 TKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVL 256 (527)
T ss_pred CCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEE
Confidence 34677777652 256888887766554333 45788899988887755332 22 35777888887765
Q ss_pred ccccCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 100 VNIRLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 100 i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
.+...+..+...+++.++.++...+.....+
T Consensus 257 -~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 257 -APDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred -CCCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 4456778888899999999999887765543
No 235
>PRK13391 acyl-CoA synthetase; Provisional
Probab=36.00 E-value=3.5e+02 Score=28.08 Aligned_cols=82 Identities=13% Similarity=0.127 Sum_probs=58.4
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+......+ ++.+++++....+... -.+...+.++..|...+.+. ......+...+++.++..++.
T Consensus 24 ~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~-~~~~~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~ 102 (511)
T PRK13391 24 VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNL-RYLEVCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALIT 102 (511)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEE
Confidence 488888877766665544 7889999988877543 22334455566666666563 467889999999999999988
Q ss_pred CcHHHHH
Q 008389 290 APVVLNS 296 (567)
Q Consensus 290 ~p~~~~~ 296 (567)
.+.....
T Consensus 103 ~~~~~~~ 109 (511)
T PRK13391 103 SAAKLDV 109 (511)
T ss_pred chhhHHH
Confidence 8766544
No 236
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=35.89 E-value=3.6e+02 Score=25.20 Aligned_cols=72 Identities=13% Similarity=0.040 Sum_probs=46.8
Q ss_pred HHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhc------C--CeeeeccccC---ChHHHHHHHhccCceEEE
Q 008389 55 CRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMA------G--AVLNAVNIRL---NAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 55 ~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~------G--~~~v~i~~~~---~~~~l~~~l~~~~~~~vi 122 (567)
.+++.+.+.+.+ +.+|++|+|.+.-+.+.++.+..+... | ..++-++... +.+.+..+.+..+....+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 344555566643 578999999999999998777666332 2 3445555543 334456677777777777
Q ss_pred Eccc
Q 008389 123 VDQE 126 (567)
Q Consensus 123 ~~~~ 126 (567)
.+.+
T Consensus 93 ~~~~ 96 (258)
T PRK10696 93 EEQD 96 (258)
T ss_pred EEec
Confidence 6543
No 237
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=35.88 E-value=3.5e+02 Score=24.84 Aligned_cols=92 Identities=7% Similarity=-0.103 Sum_probs=56.8
Q ss_pred CceeEEECCc--cccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 35 TRTSVVHGST--RYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 35 ~~~a~~~~~~--~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
.++.+-.++. +-|+++- .+..+...+.+.|..+++.|... ..+-.-....++|...|..++.+-|...+..-...
T Consensus 15 ~~l~~K~e~~~ptgS~K~R--~a~~~l~~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~ 91 (244)
T cd00640 15 ANIYLKLEFLNPTGSFKDR--GALNLILLAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQ 91 (244)
T ss_pred CEEEEEecccCCcCCcHHH--HHHHHHHHHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 4555555443 3344432 22223333334443245555554 33555566667777799888888887777788889
Q ss_pred HhccCceEEEEcccchH
Q 008389 113 LGHSASAVIMVDQEYFK 129 (567)
Q Consensus 113 l~~~~~~~vi~~~~~~~ 129 (567)
++..+++++.++..+.+
T Consensus 92 ~~~~Ga~v~~~~~~~~~ 108 (244)
T cd00640 92 MRALGAEVVLVPGDFDD 108 (244)
T ss_pred HHHCCCEEEEECCCHHH
Confidence 99999999999887443
No 238
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=35.57 E-value=3.6e+02 Score=27.55 Aligned_cols=56 Identities=13% Similarity=0.078 Sum_probs=28.6
Q ss_pred CCCCCEEEEEcCChHHHHHHH--HhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEc
Q 008389 67 IGLGCTVAIIAPNIPAIYEAH--FGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 67 ~~~gd~V~l~~~~~~~~~~~~--lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~ 124 (567)
+++||.|.+ .++++.....+ ..+.+.|+.+..++...+++.+...++. +.++|+++
T Consensus 97 l~~GD~VI~-~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 97 CSSGDHLLC-SSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred cCCCCEEEE-CCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 566666554 23333222222 2245566666666665556666666654 44555543
No 239
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=35.57 E-value=1.5e+02 Score=29.62 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=35.5
Q ss_pred HHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc-----CChHHHHHHHhccCceEEE
Q 008389 56 RRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR-----LNAPTIAFLLGHSASAVIM 122 (567)
Q Consensus 56 ~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~vi 122 (567)
..+...|...++++||.|.+-.+.. .....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLTW---VSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCcH---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444445555678888776644432 22234455677777766532 345667666643 455555
No 240
>PRK05852 acyl-CoA synthetase; Validated
Probab=35.12 E-value=2.6e+02 Score=29.38 Aligned_cols=86 Identities=9% Similarity=0.043 Sum_probs=61.6
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeee-ccccCChHHHHHHHhccCceE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNA-VNIRLNAPTIAFLLGHSASAV 120 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~-i~~~~~~~~l~~~l~~~~~~~ 120 (567)
..+|+..+...+..+...+ +++++|++....|.. ..++..+++++..|...+. -...+++..+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4578888877666665444 688999888777654 3455667888887776443 223566788889999999999
Q ss_pred EEEcccchHHHH
Q 008389 121 IMVDQEYFKLAE 132 (567)
Q Consensus 121 vi~~~~~~~~~~ 132 (567)
++..+.....+.
T Consensus 271 ~~~~P~~~~~l~ 282 (534)
T PRK05852 271 YTAVPTIHQILL 282 (534)
T ss_pred EEcChHHHHHHH
Confidence 998887765544
No 241
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.83 E-value=2.9e+02 Score=29.41 Aligned_cols=98 Identities=15% Similarity=0.149 Sum_probs=66.1
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH-HHHHHhhhhcCCeeeeccc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI-YEAHFGVPMAGAVLNAVNI 102 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~i~~ 102 (567)
.++.++++.. +..+|++.+...+..+. .....++.++|++...+|-.-.+ +...++++..|+..+...+
T Consensus 179 ~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 179 DETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred CccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 4466666652 24578877754443322 11234788999988877754332 3445777888888776666
Q ss_pred cCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 103 RLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
..+++.+...+++.++.+++..+.....+
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 77889999999999999999877655433
No 242
>PRK07798 acyl-CoA synthetase; Validated
Probab=34.70 E-value=4.1e+02 Score=27.65 Aligned_cols=84 Identities=5% Similarity=-0.101 Sum_probs=57.4
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhH-HHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEe
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWC-YTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l 287 (567)
-.+|+..+...+...... .++..+|++....+-. ..+. ..+.++..|+..+.+. .....++...+++.++..+
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~--~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 104 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNR--IEYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVAL 104 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--HHHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEE
Confidence 358888887666655544 4788899988877543 3333 3445555566655553 4577889999999999999
Q ss_pred eeCcHHHHHHH
Q 008389 288 CAAPVVLNSIV 298 (567)
Q Consensus 288 ~~~p~~~~~l~ 298 (567)
+........+.
T Consensus 105 ~~~~~~~~~~~ 115 (533)
T PRK07798 105 VYEREFAPRVA 115 (533)
T ss_pred EEchhhHHHHH
Confidence 88876655543
No 243
>PRK07470 acyl-CoA synthetase; Validated
Probab=34.41 E-value=3.1e+02 Score=28.70 Aligned_cols=98 Identities=10% Similarity=-0.028 Sum_probs=61.9
Q ss_pred CCCceeEEECC---------ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecc-c
Q 008389 33 HPTRTSVVHGS---------TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVN-I 102 (567)
Q Consensus 33 ~p~~~a~~~~~---------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~-~ 102 (567)
.++.+|++... .-+|++.+...+......+. .++.++|++..+.|-+..+-...+..+..|+..+.++ .
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 34667776632 45788777543332211111 2667889888888766443333333445565555443 4
Q ss_pred cCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 103 RLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
..+++.+...++..++.++...+.....+
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 268 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKML 268 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHH
Confidence 57788999999999999999988776554
No 244
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=34.35 E-value=2.5e+02 Score=30.05 Aligned_cols=83 Identities=13% Similarity=0.039 Sum_probs=58.8
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++++++++...++-... .+...+.+...|+..+.+. .....++...+++.++..++.
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~-~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~ 140 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPE-YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIV 140 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 47888887766555544 478899999988876432 2344556666677666664 456788999999999999998
Q ss_pred CcHHHHHH
Q 008389 290 APVVLNSI 297 (567)
Q Consensus 290 ~p~~~~~l 297 (567)
.......+
T Consensus 141 ~~~~~~~~ 148 (600)
T PRK08279 141 GEELVEAF 148 (600)
T ss_pred ChHHHHHH
Confidence 87665544
No 245
>PRK06839 acyl-CoA synthetase; Validated
Probab=34.09 E-value=3e+02 Score=28.40 Aligned_cols=86 Identities=10% Similarity=0.017 Sum_probs=60.3
Q ss_pred eeeeccHHHHHHHHHHHHH----hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceE
Q 008389 212 GVVLSHRGAYLMSLSVALI----WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTH 286 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 286 (567)
...+|+..+...+...... .++.+++++...++-... .....+.+...|+..+.+. ..++.++...+++.+++.
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 3568888887776666554 468899998888876532 2334445555666666554 367888999999999999
Q ss_pred eeeCcHHHHHHH
Q 008389 287 FCAAPVVLNSIV 298 (567)
Q Consensus 287 l~~~p~~~~~l~ 298 (567)
++..+.....+.
T Consensus 104 i~~~~~~~~~~~ 115 (496)
T PRK06839 104 LFVEKTFQNMAL 115 (496)
T ss_pred EEEcHHHHHHHH
Confidence 999887765543
No 246
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=33.92 E-value=2.7e+02 Score=29.29 Aligned_cols=97 Identities=14% Similarity=0.017 Sum_probs=64.9
Q ss_pred eEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHH----hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCC
Q 008389 197 SIALGYTSGTTASPKGVVLSHRGAYLMSLSVALI----WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVT 271 (567)
Q Consensus 197 ~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~ 271 (567)
...++|-+-.++. -.+|.+.+.......... .++ ++|++...+|...-. ....+++.-.|+-...+ ..+.
T Consensus 26 ~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 26 DTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred ceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCCC
Confidence 3445555444444 677888877665555544 346 999999999975422 22334444455544444 5689
Q ss_pred HHHHHHHHHhhCceEeeeCcHHHHHHH
Q 008389 272 AKAVYSAIAKYGVTHFCAAPVVLNSIV 298 (567)
Q Consensus 272 ~~~~~~~i~~~~~t~l~~~p~~~~~l~ 298 (567)
+..+..-|.+.++.++++....++...
T Consensus 101 ~~al~~Ri~d~~~k~vit~d~~~~~gk 127 (528)
T COG0365 101 AEAVADRIADLGPKVLIADDGTFRNGK 127 (528)
T ss_pred HHHHHHHHHccCCCEEEEecccccccc
Confidence 999999999999999998877766544
No 247
>PRK09088 acyl-CoA synthetase; Validated
Probab=33.54 E-value=4.1e+02 Score=27.32 Aligned_cols=78 Identities=8% Similarity=-0.040 Sum_probs=54.7
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++..++++...++-... .+...+.+...|+..+.+. .....++...+++.+++.+++
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 57888887766655544 468899998888776442 2333455556666666554 467888999999999999987
Q ss_pred CcH
Q 008389 290 APV 292 (567)
Q Consensus 290 ~p~ 292 (567)
...
T Consensus 101 ~~~ 103 (488)
T PRK09088 101 DDA 103 (488)
T ss_pred cch
Confidence 653
No 248
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=33.42 E-value=2.5e+02 Score=29.13 Aligned_cols=84 Identities=10% Similarity=0.022 Sum_probs=58.5
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+...... .++.+++++....|... -.....+.+...|+..+.+. .....++...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDF-AFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 46777776665555544 47889999998887543 22334445555666666554 467889999999999999998
Q ss_pred CcHHHHHHH
Q 008389 290 APVVLNSIV 298 (567)
Q Consensus 290 ~p~~~~~l~ 298 (567)
.......+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 877666553
No 249
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=33.42 E-value=91 Score=24.04 Aligned_cols=53 Identities=4% Similarity=-0.241 Sum_probs=37.9
Q ss_pred ccccHHHHHHH----HHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCe
Q 008389 44 TRYTWLQTYQR----CRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 44 ~~~Ty~el~~~----~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 96 (567)
..+.+.++... ...+...+...++.+++.|.++|.++.....+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 34556665432 235666666677888899999999988877777778888864
No 250
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=33.39 E-value=2.4e+02 Score=29.74 Aligned_cols=83 Identities=11% Similarity=0.036 Sum_probs=59.2
Q ss_pred eeccHHHHHHHHHHHH----HhccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 214 VLSHRGAYLMSLSVAL----IWGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~----~~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
.+|+..+...+..... ..++++++++...++...- -+...+.+...|+..+.+. .....++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 4788888776665554 3578999999988876532 2234455666677766564 46788999999999999999
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
........+
T Consensus 129 ~~~~~~~~~ 137 (560)
T PRK08751 129 VIDNFGTTV 137 (560)
T ss_pred EcchhHHHH
Confidence 887665443
No 251
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=33.04 E-value=4.4e+02 Score=25.13 Aligned_cols=88 Identities=9% Similarity=-0.026 Sum_probs=56.7
Q ss_pred CceeEEECCc--cccHHHHHHHHHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHH
Q 008389 35 TRTSVVHGST--RYTWLQTYQRCRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAF 111 (567)
Q Consensus 35 ~~~a~~~~~~--~~Ty~el~~~~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 111 (567)
.++.+-.++. +=|+++ +.+..+.....+.| +.+|+.|.. ...+-.-....++|...|..+..+-|...+..-..
T Consensus 23 ~~i~~K~E~~nptGS~K~--R~a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 99 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKD--RPALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKA 99 (290)
T ss_pred CeEEEEEccCCCCccHHH--HHHHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 3555555443 333332 22222223333344 477776655 55555666667788889998888888776677778
Q ss_pred HHhccCceEEEEcc
Q 008389 112 LLGHSASAVIMVDQ 125 (567)
Q Consensus 112 ~l~~~~~~~vi~~~ 125 (567)
.++..++++++++.
T Consensus 100 ~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 100 AMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999876
No 252
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=32.97 E-value=4.4e+02 Score=27.02 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=35.0
Q ss_pred cCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc-----CChHHHHHHHhccCceEEEEc
Q 008389 66 SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR-----LNAPTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 66 g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~-----~~~~~l~~~l~~~~~~~vi~~ 124 (567)
++++||.|.+-.+... ....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~t~~---a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAGFP---TTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 7889998877554433 3344555678887776543 356777776653 56666654
No 253
>PRK06178 acyl-CoA synthetase; Validated
Probab=32.89 E-value=2.8e+02 Score=29.33 Aligned_cols=84 Identities=12% Similarity=0.050 Sum_probs=60.9
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++++++++...++.... .....+.+...|+..+.+. ......+...+++.++..+++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 57888887666655543 478899999888876542 3344555666677666554 467789999999999999999
Q ss_pred CcHHHHHHH
Q 008389 290 APVVLNSIV 298 (567)
Q Consensus 290 ~p~~~~~l~ 298 (567)
.+..+..+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 988776554
No 254
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=32.86 E-value=2.5e+02 Score=29.70 Aligned_cols=83 Identities=10% Similarity=-0.000 Sum_probs=59.2
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++.++|++...++.... .....+.++..|+..+.+. .....++...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 368999887776665554 478899999988876432 2334456666777766664 45788999999999999999
Q ss_pred eCcHHHHH
Q 008389 289 AAPVVLNS 296 (567)
Q Consensus 289 ~~p~~~~~ 296 (567)
....+...
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665443
No 255
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.51 E-value=3.9e+02 Score=28.14 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=71.6
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. +..+|++.+...+..+...+... +.+.|++...+|-. .-+...+++.+..|...+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 4778888752 25689999988877776666431 77888877777754 445667788889999888776
Q ss_pred c-cCChHHHHHHHhccCceEEEEcccchHH
Q 008389 102 I-RLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 102 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
+ .+.++.+...+...++..+..-+.....
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ 277 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRE 277 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHH
Confidence 5 6889888898888887777776665544
No 256
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=32.51 E-value=1.7e+02 Score=30.59 Aligned_cols=79 Identities=16% Similarity=0.003 Sum_probs=61.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcC--ChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAP--NIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~--~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
--+|+......+.-+.. -.|+.+.|+|-+.+| ++.-.++-+-+|+..|+++| |...+|+..+-.-..+.++.++
T Consensus 260 Avith~r~~~~a~g~~~---~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 260 AVITHLRYLQGAAGFYY---VFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHHHHHHHHHHHH---HhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 34777665554443333 449999999988886 56777888899999999866 8899999999999999999888
Q ss_pred EEccc
Q 008389 122 MVDQE 126 (567)
Q Consensus 122 i~~~~ 126 (567)
-.-.|
T Consensus 336 QYIGE 340 (649)
T KOG1179|consen 336 QYIGE 340 (649)
T ss_pred ehHHH
Confidence 65444
No 257
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=32.38 E-value=1.9e+02 Score=28.81 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=40.2
Q ss_pred HHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccc-----cCChHHHHHHHhc---cCceEEEE
Q 008389 56 RRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNI-----RLNAPTIAFLLGH---SASAVIMV 123 (567)
Q Consensus 56 ~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~-----~~~~~~l~~~l~~---~~~~~vi~ 123 (567)
..+...+...++++||.|.+-.+.. ....-++...|+.++.++. ..+.+.+...++. -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 4444555556788999877755543 3334556677887776654 2456777777763 35566663
No 258
>PRK05850 acyl-CoA synthetase; Validated
Probab=32.08 E-value=6e+02 Score=26.91 Aligned_cols=83 Identities=13% Similarity=0.054 Sum_probs=58.3
Q ss_pred eeeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEecc----CCHHHHHHHHHhhCce
Q 008389 213 VVLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQ----VTAKAVYSAIAKYGVT 285 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t 285 (567)
..+|+..+...+......+ + .++|++...++... --+...+.+...|+..+.+.. ....++...++..++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 4688888876666555443 4 57899888888653 223345555666777666643 3567899999999999
Q ss_pred EeeeCcHHHHHH
Q 008389 286 HFCAAPVVLNSI 297 (567)
Q Consensus 286 ~l~~~p~~~~~l 297 (567)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766654
No 259
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=31.64 E-value=5.5e+02 Score=26.45 Aligned_cols=49 Identities=12% Similarity=0.177 Sum_probs=31.3
Q ss_pred HccCCCCCEEEEEcCChHHHHHHHHh-hhhcCCeeeec--------------cccCChHHHHHHHhccC
Q 008389 64 KRSIGLGCTVAIIAPNIPAIYEAHFG-VPMAGAVLNAV--------------NIRLNAPTIAFLLGHSA 117 (567)
Q Consensus 64 ~~g~~~gd~V~l~~~~~~~~~~~~lA-~~~~G~~~v~i--------------~~~~~~~~l~~~l~~~~ 117 (567)
..++++||.| + +..++...-| +...|++++=+ ..+++++.+...++...
T Consensus 111 ~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 111 RIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 4588999964 3 3333334444 67778877633 34577889999887643
No 260
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=30.75 E-value=2.2e+02 Score=21.01 Aligned_cols=67 Identities=9% Similarity=0.243 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchH
Q 008389 50 QTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK 129 (567)
Q Consensus 50 el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (567)
++.+.++..++.|+.-|+.|. |.++.|.-++++..- ..-.+|.. ...++..+.++|++|..++.
T Consensus 9 ~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~~-~l~~~~lk-------------vy~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSEE-VLEVSGLK-------------VYVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEE-------------EEE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHHH-HHHhhCce-------------EEEHHhcCCceEEEchHHhc
Confidence 567778899999999999987 888888777776440 00011111 13567889999999998866
Q ss_pred HHH
Q 008389 130 LAE 132 (567)
Q Consensus 130 ~~~ 132 (567)
..+
T Consensus 73 ~~~ 75 (85)
T PF08967_consen 73 QLK 75 (85)
T ss_dssp TST
T ss_pred ccc
Confidence 543
No 261
>PRK07476 eutB threonine dehydratase; Provisional
Probab=30.69 E-value=3.8e+02 Score=26.06 Aligned_cols=55 Identities=9% Similarity=-0.060 Sum_probs=41.4
Q ss_pred CChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHH
Q 008389 78 PNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 78 ~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (567)
..+-.-..+.++|.+.|..++.+-|...+......++..++++++++....+...
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~ 128 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDAQA 128 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHHHH
Confidence 4455556667788899998888777777777788899999999999876544333
No 262
>PRK05973 replicative DNA helicase; Provisional
Probab=30.52 E-value=1.9e+02 Score=26.72 Aligned_cols=106 Identities=15% Similarity=0.070 Sum_probs=66.6
Q ss_pred Ccccccccccccchhhh---cccCHHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHH--HHHHHHHccCCCCCEEEE
Q 008389 1 MSMAKGIDDLPKNAANY---MALTPLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRR--LASALCKRSIGLGCTVAI 75 (567)
Q Consensus 1 ~~~~~~~~~~~~~~~~~---~~~t~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~--lA~~L~~~g~~~gd~V~l 75 (567)
|-|+.++..+.+.+-.. ...++.+.+++.|....- -+|.-|...+.. -+..|. -|+.+|+.+.|
T Consensus 1 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~a~~~g~----------~~w~~~~~~~~~~~p~~~l~-GGl~~Gsl~LI 69 (237)
T PRK05973 1 MRLSAPIYHLKRKAKLLSRAQNIPLHEALDRIAAEEGF----------SSWSLLAAKAAATTPAEELF-SQLKPGDLVLL 69 (237)
T ss_pred CCcchHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcc----------chHHHHHHhccCCCCHHHhc-CCCCCCCEEEE
Confidence 44555665555433332 357788888888764432 245555555443 233443 39999999999
Q ss_pred EcCChHH--HHHHHH--hhhhcCCeeeeccccCChHHHHHHHhccC
Q 008389 76 IAPNIPA--IYEAHF--GVPMAGAVLNAVNIRLNAPTIAFLLGHSA 117 (567)
Q Consensus 76 ~~~~~~~--~~~~~l--A~~~~G~~~v~i~~~~~~~~l~~~l~~~~ 117 (567)
..+++.- .+...+ ..++-|-.++.+....+.+++...+...+
T Consensus 70 aG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~~R~~s~g 115 (237)
T PRK05973 70 GARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVRDRLRALG 115 (237)
T ss_pred EeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHHHHcC
Confidence 9987632 333322 23345888888888888888888887664
No 263
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=30.32 E-value=3.2e+02 Score=28.29 Aligned_cols=84 Identities=10% Similarity=0.013 Sum_probs=61.1
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeecccc--CChHHHHHHHhccCceE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNIR--LNAPTIAFLLGHSASAV 120 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~--~~~~~l~~~l~~~~~~~ 120 (567)
..+|+..+...+..+... .++..++++....|-+.. .+..+++++..|+..+..+.. ..+..+...++..++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 568888887666544443 477888888777665433 345678899999998877654 45678888999999999
Q ss_pred EEEcccchHH
Q 008389 121 IMVDQEYFKL 130 (567)
Q Consensus 121 vi~~~~~~~~ 130 (567)
+...+.....
T Consensus 236 ~~~~p~~~~~ 245 (502)
T TIGR01734 236 WVSTPSFVDM 245 (502)
T ss_pred EEEChhHHHH
Confidence 9888776543
No 264
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=30.28 E-value=3.9e+02 Score=31.38 Aligned_cols=96 Identities=9% Similarity=0.027 Sum_probs=67.0
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCCh--HHHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNI--PAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. +..+|.+.+...+...+.. .+++++|++...+|-. ..+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 5677777652 2458888887766665543 3778999988887753 233355677778898887665
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
.....+.+...+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555566777889999999998877655443
No 265
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=30.26 E-value=6.9e+02 Score=27.22 Aligned_cols=83 Identities=12% Similarity=0.035 Sum_probs=59.1
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhH-HHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEe
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWC-YTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHF 287 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l 287 (567)
..+|++.+...+...... .++.++|++...++-.. .|. ..+.+...|+..+.+ ....++++...++..+++.+
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~--ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v 152 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCP--QWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFV 152 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEE
Confidence 346888887776666554 48899999888887643 343 344555667666655 45678999999999999999
Q ss_pred eeCcHHHHHH
Q 008389 288 CAAPVVLNSI 297 (567)
Q Consensus 288 ~~~p~~~~~l 297 (567)
+.....+..+
T Consensus 153 ~~~~~~~~~~ 162 (660)
T PLN02430 153 FVQDKKIKEL 162 (660)
T ss_pred EECHHHHHHH
Confidence 9877654443
No 266
>PRK09224 threonine dehydratase; Reviewed
Probab=30.23 E-value=4.4e+02 Score=27.65 Aligned_cols=96 Identities=10% Similarity=0.053 Sum_probs=58.5
Q ss_pred CCceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHH
Q 008389 34 PTRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAF 111 (567)
Q Consensus 34 p~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~ 111 (567)
..++.+-.++ .+-||+. +-....++. |.+....+| | +.+..+-....+.++|.++|..++.+-|...+..-..
T Consensus 34 g~~i~lK~E~lqptgSfK~-RgA~n~i~~-l~~~~~~~g--v-V~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~ 108 (504)
T PRK09224 34 GNQVLLKREDLQPVFSFKL-RGAYNKMAQ-LTEEQLARG--V-ITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVD 108 (504)
T ss_pred CCEEEEEecCCCCCCCChH-HHHHHHHHh-hhHHhcCCE--E-EEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3456665554 3345655 222223332 332211222 2 3344566666777889999998888777777766677
Q ss_pred HHhccCceEEEEcccchHHHHHH
Q 008389 112 LLGHSASAVIMVDQEYFKLAEEA 134 (567)
Q Consensus 112 ~l~~~~~~~vi~~~~~~~~~~~~ 134 (567)
.++..+++++++...+.+....+
T Consensus 109 ~~r~~GA~Vi~~g~~~~~a~~~a 131 (504)
T PRK09224 109 AVRAFGGEVVLHGDSFDEAYAHA 131 (504)
T ss_pred HHHhCCCEEEEECCCHHHHHHHH
Confidence 89999999999987655444433
No 267
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=30.07 E-value=2.4e+02 Score=27.58 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=46.2
Q ss_pred HHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcc
Q 008389 62 LCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQ 125 (567)
Q Consensus 62 L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (567)
|++.+++||++|+|..--+.-.+.+.+|-.. |+.++.++.+ ++-....++.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 4556899999999999889999999888744 4777777654 3334567778899999865
No 268
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=29.90 E-value=1.2e+02 Score=29.60 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=43.3
Q ss_pred cccHHHHHHH------HHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 45 RYTWLQTYQR------CRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 45 ~~Ty~el~~~------~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
.+-|.++... ...+...+.+.|+.+++.|.++|..+.....+++++-.+|..-+-
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~~v~ 298 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKTDVP 298 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCee
Confidence 4667666442 466777788889999999999999999988889999999975443
No 269
>PRK05939 hypothetical protein; Provisional
Probab=29.08 E-value=5.2e+02 Score=26.03 Aligned_cols=56 Identities=9% Similarity=0.063 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEc
Q 008389 67 IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 67 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~ 124 (567)
+++||.|.+.-+.-......+-++-+.|+.+..++.. ..+.+...++. +.++|+++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 5677877664322111112222344567777666543 45666666643 55666553
No 270
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=28.96 E-value=29 Score=16.60 Aligned_cols=9 Identities=44% Similarity=0.789 Sum_probs=6.7
Q ss_pred ccCCccCcC
Q 008389 340 TYGLSETYG 348 (567)
Q Consensus 340 ~YG~tE~~~ 348 (567)
.||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 489888754
No 271
>PRK13382 acyl-CoA synthetase; Provisional
Probab=28.51 E-value=3.8e+02 Score=28.19 Aligned_cols=82 Identities=12% Similarity=-0.030 Sum_probs=56.7
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+...... .++.+++++...++-... -+...+.+...|+..+.+. .....++...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 57888877666555554 478899999988875432 2334455555666666564 356788999999999999988
Q ss_pred CcHHHHH
Q 008389 290 APVVLNS 296 (567)
Q Consensus 290 ~p~~~~~ 296 (567)
.......
T Consensus 147 ~~~~~~~ 153 (537)
T PRK13382 147 DEEFSAT 153 (537)
T ss_pred chhhHHH
Confidence 7655443
No 272
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=28.25 E-value=3.1e+02 Score=26.61 Aligned_cols=90 Identities=10% Similarity=-0.132 Sum_probs=53.7
Q ss_pred CceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 35 TRTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 35 ~~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
.++.+-.++ .+=|+++ +.+..+...+.+.| ++.|... ..+-.-..+.++|...|..+..+-|...+..-...
T Consensus 38 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKD--RGMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHH--hhHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 345555543 3344442 22333333333444 4455544 23333344457888899888877776566677788
Q ss_pred HhccCceEEEEcccchHH
Q 008389 113 LGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 113 l~~~~~~~vi~~~~~~~~ 130 (567)
++..++++++++....+.
T Consensus 112 l~~~GA~Vi~~~~~~~~~ 129 (324)
T cd01563 112 ALAYGATVLAVEGNFDDA 129 (324)
T ss_pred HHHcCCEEEEECCcHHHH
Confidence 999999999998765443
No 273
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=28.19 E-value=2.3e+02 Score=28.74 Aligned_cols=116 Identities=14% Similarity=0.114 Sum_probs=63.8
Q ss_pred CHHHHHhhhhhcCC-CceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeee
Q 008389 21 TPLWFLDRAATVHP-TRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNA 99 (567)
Q Consensus 21 t~~~~l~~~a~~~p-~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 99 (567)
.+.+.-+..|+.+. ++..+...+.+-. ..|..+ . -+++||.|.+ -.|+--.++. |+...|+.++.
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g---------~~a~i~-a-~~~~gd~VLv-~RN~HkSv~~--alil~ga~Pvy 132 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSG---------NQAMIM-A-LCRPGDKVLV-DRNCHKSVYN--ALILSGAIPVY 132 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHH---------HHHHHH-H-HTTTTCEEEE-ETT--HHHHH--HHHHHTEEEEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHH---------HHHHHH-H-hcCCCCEEEE-cCCcHHHHHH--HHHHcCCeEEE
Confidence 45566666666665 5555555443321 111111 1 1479998665 5555555544 99999999999
Q ss_pred cccc---------CCh-----HHHHHHHhccC-ce----EEEEcccchH---HHHHHHHHHhhhcCCCCCCCeEEEecCC
Q 008389 100 VNIR---------LNA-----PTIAFLLGHSA-SA----VIMVDQEYFK---LAEEALKIMEEKSNGRFKPPLLIVIGDE 157 (567)
Q Consensus 100 i~~~---------~~~-----~~l~~~l~~~~-~~----~vi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 157 (567)
|+|. .++ +.+...+++.. ++ ++|+++.+.. .+....+.+. .....+.+++.
T Consensus 133 i~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h-------~~~~~llvDEA 205 (417)
T PF01276_consen 133 IPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICH-------KHGIPLLVDEA 205 (417)
T ss_dssp EEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHC-------CTECEEEEE-T
T ss_pred ecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhc-------ccCCEEEEEcc
Confidence 9884 234 77877776543 33 5777776543 3444444444 34445556554
No 274
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=28.14 E-value=2.8e+02 Score=29.12 Aligned_cols=76 Identities=13% Similarity=0.041 Sum_probs=53.9
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++.++|++...+|... -.+...+.++..|+..+.+. .....++...++..++..++.
T Consensus 49 ~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 127 (547)
T PRK06087 49 SYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFA 127 (547)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEE
Confidence 57888887766665554 47899999998877543 22334555666677666554 466788999999999998877
Q ss_pred C
Q 008389 290 A 290 (567)
Q Consensus 290 ~ 290 (567)
.
T Consensus 128 ~ 128 (547)
T PRK06087 128 P 128 (547)
T ss_pred e
Confidence 4
No 275
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.04 E-value=3.3e+02 Score=28.86 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=57.4
Q ss_pred eeccHHHHHHHHHHHHHh----ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 214 VLSHRGAYLMSLSVALIW----GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
.+|+..+...+......+ ++.++|++...++... .-....+.+...|+..+.+. .....++...+++.++..++
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~-~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii 127 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVL-QYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALV 127 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEE
Confidence 578888877766666543 6889999999887643 22233455556666666554 46778899999999999998
Q ss_pred eCcHHHH
Q 008389 289 AAPVVLN 295 (567)
Q Consensus 289 ~~p~~~~ 295 (567)
.......
T Consensus 128 ~~~~~~~ 134 (562)
T PRK05677 128 CLANMAH 134 (562)
T ss_pred Eecchhh
Confidence 8765544
No 276
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=27.73 E-value=2.4e+02 Score=27.05 Aligned_cols=63 Identities=10% Similarity=0.105 Sum_probs=36.1
Q ss_pred hHHHHHHHhcCCCceeeEEEEeecCCCCCcceEEEEEcCCccchhhHHHHHHHHHHHHhcCCC
Q 008389 465 SVEVENMMYLHPAVLEASVVARADERWGESPCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPA 527 (567)
Q Consensus 465 ~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 527 (567)
..+|++.+.++|+|.++.=+-...-.....+.+.++..++..-.+..++.+++++.++++++.
T Consensus 215 ~~~I~~~i~~~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~ 277 (299)
T PRK09509 215 RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPG 277 (299)
T ss_pred HHHHHHHHHhCCCCcCceeeeeEeeCCeEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 467888888888876544222222111123445566665542334455667788888887764
No 277
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=27.56 E-value=74 Score=22.69 Aligned_cols=31 Identities=26% Similarity=0.143 Sum_probs=18.2
Q ss_pred cccHHHHHHHHHHHHHHHHHccCCCCCEEEE
Q 008389 45 RYTWLQTYQRCRRLASALCKRSIGLGCTVAI 75 (567)
Q Consensus 45 ~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l 75 (567)
.+.|-+-.-+...+-..|.+.|+++||.|-|
T Consensus 32 ~~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 32 SLRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp GHHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 3444444444555667778889999999876
No 278
>PRK06382 threonine dehydratase; Provisional
Probab=27.44 E-value=4.2e+02 Score=26.81 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=40.9
Q ss_pred cCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 77 APNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
+..+=.-..+.++|...|..+..+-|...+..-...++..+++++++...+.+.
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~a 132 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDEA 132 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHHH
Confidence 344445555678899999988888887777777788999999999998764443
No 279
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.32 E-value=3.8e+02 Score=28.11 Aligned_cols=82 Identities=10% Similarity=-0.030 Sum_probs=57.4
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++++++++....+-... .+...+.+...|+..+.+. .....++...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 57888887766665544 478899998888775432 2334555566677666654 457788999999999999988
Q ss_pred CcHHHHH
Q 008389 290 APVVLNS 296 (567)
Q Consensus 290 ~p~~~~~ 296 (567)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 8765544
No 280
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=27.13 E-value=5.7e+02 Score=26.77 Aligned_cols=79 Identities=15% Similarity=0.043 Sum_probs=55.2
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++.+++++...++-.. -.+...+.+...|+..+.+. .....++...++..+++.++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 130 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRW-EFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFV 130 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEE
Confidence 467888887766555544 47889999998887543 22334455566666655553 45678899999999999998
Q ss_pred eCcH
Q 008389 289 AAPV 292 (567)
Q Consensus 289 ~~p~ 292 (567)
..+.
T Consensus 131 ~~~~ 134 (538)
T TIGR03208 131 VPSV 134 (538)
T ss_pred Eccc
Confidence 7654
No 281
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=26.53 E-value=8.2e+02 Score=26.20 Aligned_cols=85 Identities=11% Similarity=-0.052 Sum_probs=57.9
Q ss_pred eeeeccHHHHHHHHHHHHHh--ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-cc-CC--HHHHHHHHHhhCce
Q 008389 212 GVVLSHRGAYLMSLSVALIW--GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQ-VT--AKAVYSAIAKYGVT 285 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~~--~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~-~~--~~~~~~~i~~~~~t 285 (567)
...+|+..+...+..+...+ .+.++|++...++.... -+...+.+...|+..+.+ .. .. ..++...++..++.
T Consensus 66 ~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 144 (612)
T PRK12476 66 AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPT 144 (612)
T ss_pred ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCC
Confidence 34679988877766655544 26899999988886532 233444555666666555 22 22 67889999999999
Q ss_pred EeeeCcHHHHHH
Q 008389 286 HFCAAPVVLNSI 297 (567)
Q Consensus 286 ~l~~~p~~~~~l 297 (567)
.+++.+.....+
T Consensus 145 ~li~~~~~~~~~ 156 (612)
T PRK12476 145 VVLTTTAAAEAV 156 (612)
T ss_pred EEEEcHHHHHHH
Confidence 999987665543
No 282
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=26.40 E-value=4.6e+02 Score=23.27 Aligned_cols=110 Identities=11% Similarity=0.001 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhc----cCCCcEEEEecCc--cchhhhHHHHHHhhhcCeeEEe--ccCCHHHHHHHHHhhCceEeee
Q 008389 218 RGAYLMSLSVALIWG----MNEGAVYLWTLPM--FHCNGWCYTWSLAALCGTSICL--RQVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 218 ~~l~~~~~~~~~~~~----~~~~d~~~~~~p~--~~~~g~~~~~~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~t~l~~ 289 (567)
+.+...+......+. .....+++...+. .|..|....-..+-..|--++. ....++++.+.+++.+++++..
T Consensus 62 ~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~l 141 (197)
T TIGR02370 62 DAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTG 141 (197)
T ss_pred HHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEE
Q ss_pred Cc------HHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHHHHH
Q 008389 290 AP------VVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVLHAM 330 (567)
Q Consensus 290 ~p------~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~ 330 (567)
+- ..++.+.+...+.. +..--.+++||.++.++..+.+
T Consensus 142 S~~~~~~~~~~~~~i~~l~~~~---~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 142 SALMTTTMYGQKDINDKLKEEG---YRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred ccccccCHHHHHHHHHHHHHcC---CCCCCEEEEEChhcCHHHHHHh
No 283
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=26.20 E-value=3.9e+02 Score=22.31 Aligned_cols=86 Identities=15% Similarity=0.066 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHc---cCCCCCEEEEEc-CChHHHHHHH-HhhhhcCCeeeeccccC-------ChHHHHHHHhccC
Q 008389 50 QTYQRCRRLASALCKR---SIGLGCTVAIIA-PNIPAIYEAH-FGVPMAGAVLNAVNIRL-------NAPTIAFLLGHSA 117 (567)
Q Consensus 50 el~~~~~~lA~~L~~~---g~~~gd~V~l~~-~~~~~~~~~~-lA~~~~G~~~v~i~~~~-------~~~~l~~~l~~~~ 117 (567)
.|.+++..+-....+. ..-+|..|++++ .+|...-.++ .|+.++|+.++.+++.. +..+...+|...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3444455555544432 344566676655 6666655444 89999999999998643 356677788888
Q ss_pred ceEEEEcccchHHHHHHHH
Q 008389 118 SAVIMVDQEYFKLAEEALK 136 (567)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~~ 136 (567)
+++|++=......+.+..+
T Consensus 95 ~D~iv~R~~~~~~~~~~a~ 113 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAE 113 (142)
T ss_dssp CSEEEEEESSHHHHHHHHH
T ss_pred hheEEEEeccchHHHHHHH
Confidence 7777775555555555443
No 284
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=25.93 E-value=4.9e+02 Score=24.74 Aligned_cols=57 Identities=18% Similarity=0.043 Sum_probs=44.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEccc
Q 008389 69 LGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQE 126 (567)
Q Consensus 69 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (567)
.++.| +....+-.-..+.++|...|..++.+-|...+..-...++..+++++.+...
T Consensus 55 ~~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 55 GGRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TTSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred cccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 34556 5566666677777888888999888888777777788999999999988764
No 285
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=25.83 E-value=4.5e+02 Score=31.78 Aligned_cols=98 Identities=9% Similarity=-0.115 Sum_probs=62.3
Q ss_pred CcCceEEEEecCCCCCCCCeeeeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEecc
Q 008389 193 DEWQSIALGYTSGTTASPKGVVLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQ 269 (567)
Q Consensus 193 ~~~~~~~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~ 269 (567)
.++.++++...+...+......+|++.+...+......+ ++++++++...++-... .....+.++..|+..+.+.+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEeccCC
Confidence 345666654322111111234689998887776666554 78999999988876532 23445566667777666644
Q ss_pred -CCHHHHHHHHHhhCceEeeeCc
Q 008389 270 -VTAKAVYSAIAKYGVTHFCAAP 291 (567)
Q Consensus 270 -~~~~~~~~~i~~~~~t~l~~~p 291 (567)
..+.++...++..++..++...
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 4567788888888888877643
No 286
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=25.81 E-value=1.3e+02 Score=21.70 Aligned_cols=46 Identities=24% Similarity=0.191 Sum_probs=31.9
Q ss_pred ccCHHHHHhhhhhcCCC-------ceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCC
Q 008389 19 ALTPLWFLDRAATVHPT-------RTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPN 79 (567)
Q Consensus 19 ~~t~~~~l~~~a~~~p~-------~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~ 79 (567)
..|+.+++++...++|+ ..++...++.++ .+.-++.||+|+++-|-
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~ppv 77 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPPV 77 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCCC
Confidence 57999999999888775 333444455444 22357899999998663
No 287
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=25.80 E-value=81 Score=22.50 Aligned_cols=20 Identities=35% Similarity=0.182 Sum_probs=15.0
Q ss_pred HHHHHHHHccCCCCCEEEEE
Q 008389 57 RLASALCKRSIGLGCTVAII 76 (567)
Q Consensus 57 ~lA~~L~~~g~~~gd~V~l~ 76 (567)
.+-..|.+.|+++||.|-|.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEc
Confidence 34555667799999999874
No 288
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.72 E-value=2.2e+02 Score=20.80 Aligned_cols=66 Identities=11% Similarity=0.044 Sum_probs=50.0
Q ss_pred ccccHHHHHHHHHHHHH---HHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceE
Q 008389 44 TRYTWLQTYQRCRRLAS---ALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAV 120 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~---~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~ 120 (567)
...||+||.+.-+.++. .|....++..|-|+|+-=++.... -++.+.-..+.+++...++..++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchh
Confidence 35799999988776654 455568888999999876665432 3567788888999999888888764
No 289
>PRK12582 acyl-CoA synthetase; Provisional
Probab=25.66 E-value=3.2e+02 Score=29.47 Aligned_cols=78 Identities=8% Similarity=-0.118 Sum_probs=53.2
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEecc-CC-----HHHHHHHHHhhC
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQ-VT-----AKAVYSAIAKYG 283 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~~-----~~~~~~~i~~~~ 283 (567)
-.+|+..+...+...... .+++++|++...++-.. --....+.+...|+..+.+.+ .. ..++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSI-EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 468899887776666554 47899999998888542 223344455556666665543 22 378888999999
Q ss_pred ceEeeeCc
Q 008389 284 VTHFCAAP 291 (567)
Q Consensus 284 ~t~l~~~p 291 (567)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88887754
No 290
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=25.39 E-value=6.3e+02 Score=26.43 Aligned_cols=54 Identities=9% Similarity=-0.053 Sum_probs=41.7
Q ss_pred cCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 77 APNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
+..+=....+.++|.+.|..++.+-|...+..-...++..+++++++...+.+.
T Consensus 71 aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~~~d~a 124 (499)
T TIGR01124 71 ASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGANFDDA 124 (499)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCcCHHHH
Confidence 445555666778889999988888887777777789999999999998665433
No 291
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=25.33 E-value=4.8e+02 Score=26.68 Aligned_cols=62 Identities=10% Similarity=-0.093 Sum_probs=47.0
Q ss_pred EEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHH
Q 008389 74 AIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEAL 135 (567)
Q Consensus 74 ~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 135 (567)
.+....+=.-..+.++|..+|..+..+-|...+..-...++..+++++++..++........
T Consensus 155 Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~A~ 216 (431)
T TIGR02035 155 IAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEEGR 216 (431)
T ss_pred EEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHH
Confidence 34445555666677888888988888888777888889999999999999987655444433
No 292
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=25.22 E-value=4.1e+02 Score=27.25 Aligned_cols=87 Identities=8% Similarity=-0.106 Sum_probs=56.3
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHcc-CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRS-IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g-~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
++.+-.++ .+-|++.= -....+...+ +.| +.+|+.|.. +..+-.-....++|.+.|..+..+-|...++.-...
T Consensus 27 ~i~~K~E~~nptGS~K~R-~a~~~l~~a~-~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKDR-IALRMIEDAE-ASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHHH-HHHHHHHHHH-HcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 55555544 33334332 2222333333 344 467776655 455666667778888999988888776666677789
Q ss_pred HhccCceEEEEcc
Q 008389 113 LGHSASAVIMVDQ 125 (567)
Q Consensus 113 l~~~~~~~vi~~~ 125 (567)
++..++++++++.
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 9999999999875
No 293
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=25.21 E-value=4.2e+02 Score=25.33 Aligned_cols=60 Identities=7% Similarity=-0.006 Sum_probs=43.0
Q ss_pred CCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 70 GCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 70 gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
++.|... ..+-.-..+.++|...|..++.+-|...+......++..++++++++.++...
T Consensus 65 ~~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~~~ 124 (304)
T cd01562 65 AKGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFDEA 124 (304)
T ss_pred CCcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 3444443 44555666667777899888777776666677889999999999998864443
No 294
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=25.19 E-value=1.5e+02 Score=21.82 Aligned_cols=42 Identities=21% Similarity=0.029 Sum_probs=34.7
Q ss_pred HHHHHH-ccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeec
Q 008389 59 ASALCK-RSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 59 A~~L~~-~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i 100 (567)
..+|.+ .|+++|+.++.+.-...|.++.+=|++++.-+-+-.
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~ 45 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELAT 45 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEe
Confidence 345665 499999999999999999999999999998665544
No 295
>PLN02356 phosphateglycerate kinase
Probab=25.14 E-value=4.7e+02 Score=26.62 Aligned_cols=64 Identities=14% Similarity=-0.058 Sum_probs=45.8
Q ss_pred HHHHccC-CCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcc
Q 008389 61 ALCKRSI-GLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQ 125 (567)
Q Consensus 61 ~L~~~g~-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (567)
.+.+.|. .+|..|+ ....+-.-+...++|...|..++.+-|...+.+-...++..+++++.++.
T Consensus 94 ~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 94 EALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 3334443 4776554 34445556777788888999888887776667777899999999999853
No 296
>PRK09192 acyl-CoA synthetase; Validated
Probab=25.14 E-value=5e+02 Score=27.56 Aligned_cols=86 Identities=8% Similarity=-0.112 Sum_probs=59.4
Q ss_pred eeeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEecc-C-------CHHHHHHHHH
Q 008389 212 GVVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLRQ-V-------TAKAVYSAIA 280 (567)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~~-~-------~~~~~~~~i~ 280 (567)
.-.+|...+...+...... .++++++++...++... ......+.+...|+..+.+.. . ..+++...++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDG-DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCch-hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 3568888887666555554 47899999998888643 223344556667777666632 1 1578999999
Q ss_pred hhCceEeeeCcHHHHHHH
Q 008389 281 KYGVTHFCAAPVVLNSIV 298 (567)
Q Consensus 281 ~~~~t~l~~~p~~~~~l~ 298 (567)
..++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999998876654444
No 297
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.11 E-value=3.1e+02 Score=27.48 Aligned_cols=107 Identities=21% Similarity=0.160 Sum_probs=57.7
Q ss_pred eccHHHHHHHHHHH---HHhccCCCcEEEEecCccchhhhHHHHHHh-hhcCeeEEe-ccCCHHHHHHHHHhhCceEeee
Q 008389 215 LSHRGAYLMSLSVA---LIWGMNEGAVYLWTLPMFHCNGWCYTWSLA-ALCGTSICL-RQVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 215 ~t~~~l~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~-~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (567)
+|.+.+...+.... ...|++++|+++.-+|-. ..|...+.++ -.|..-+.. +.....++-...+...++.++.
T Consensus 54 ~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~--~ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~ 131 (542)
T COG1021 54 LSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNV--AEFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIV 131 (542)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCch--HHHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheee
Confidence 67777766655554 446899999999888853 3344334443 344444433 4444445544555445544433
Q ss_pred C----cHHHHHHHcCCCCCCcCCCCchhhhhccCCCCCHHHH
Q 008389 290 A----PVVLNSIVNAPSEDTILPLPHVVHVNTAGAAPPPSVL 327 (567)
Q Consensus 290 ~----p~~~~~l~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~ 327 (567)
. ....+.+++....+ .+++|+++.-|+.-.+...
T Consensus 132 ~~~~~gFd~~~~ar~~~a~----~~tlr~v~v~ge~~~~~~~ 169 (542)
T COG1021 132 ARQHSGFDYRPFARELVAK----HPTLRHVIVAGEAEHPSVL 169 (542)
T ss_pred chhhcccCcHHHHHHHHhh----CCcceEEEEccCCCCcchh
Confidence 2 11122222211111 5778888888887544333
No 298
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=24.86 E-value=7.3e+02 Score=25.05 Aligned_cols=24 Identities=8% Similarity=0.134 Sum_probs=16.5
Q ss_pred CChHHHHHHHhccCceEEEEcccc
Q 008389 104 LNAPTIAFLLGHSASAVIMVDQEY 127 (567)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~ 127 (567)
..-+++..+++..+|++|+++...
T Consensus 156 ID~d~l~~~a~~~kPklIi~G~S~ 179 (399)
T PF00464_consen 156 IDYDELEKLAKEHKPKLIICGASS 179 (399)
T ss_dssp B-HHHHHHHHHHH--SEEEEE-SS
T ss_pred ECHHHHHHHHhhcCCCEEEECchh
Confidence 446788999999999999998754
No 299
>PLN02479 acetate-CoA ligase
Probab=24.82 E-value=4.7e+02 Score=27.70 Aligned_cols=81 Identities=7% Similarity=0.071 Sum_probs=57.7
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+......+ ++.++|++....+... -.+...+.++..|+..+.+. .....++...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 578888877766665554 7899999998888543 22233445556666665553 467789999999999999998
Q ss_pred CcHHHH
Q 008389 290 APVVLN 295 (567)
Q Consensus 290 ~p~~~~ 295 (567)
.+.++.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 876643
No 300
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.77 E-value=4e+02 Score=22.03 Aligned_cols=59 Identities=7% Similarity=-0.161 Sum_probs=44.8
Q ss_pred HHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEccc---chHHHHHHHHHHh
Q 008389 81 PAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQE---YFKLAEEALKIME 139 (567)
Q Consensus 81 ~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (567)
....+..+.+-..|.-++.+-.+.+++++.....+.+|++|..+.. ....+.+....+.
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~ 79 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCI 79 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHH
Confidence 3345555666678999999999999999999999999999998753 3444555555444
No 301
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=24.74 E-value=5.1e+02 Score=25.84 Aligned_cols=92 Identities=10% Similarity=0.000 Sum_probs=56.7
Q ss_pred CceeEEECCc--cccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHH
Q 008389 35 TRTSVVHGST--RYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFL 112 (567)
Q Consensus 35 ~~~a~~~~~~--~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~ 112 (567)
.++.+-.++. +=||++ + -+......+.+.+...+ .+.+..+=....+.++|.+.|..+..+-|...+..-...
T Consensus 15 ~~i~~K~E~~~ptgS~K~-R-~a~~~i~~~~~~~~~~~---vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 89 (380)
T TIGR01127 15 SEVYLKLENLQKTGSFKI-R-GALNKIANLSEDQRQRG---VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKA 89 (380)
T ss_pred CeEEEEecCCCCCCCcHH-H-HHHHHHHhcchhccCCE---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHH
Confidence 4556655543 445554 2 22222222333333222 333444555566778889999988888887777777889
Q ss_pred HhccCceEEEEcccchHHH
Q 008389 113 LGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 113 l~~~~~~~vi~~~~~~~~~ 131 (567)
++..++++++++..+.+..
T Consensus 90 ~~~~GA~V~~~~~~~~~a~ 108 (380)
T TIGR01127 90 TKSYGAEVILHGDDYDEAY 108 (380)
T ss_pred HHHCCCEEEEECCCHHHHH
Confidence 9999999999986544433
No 302
>PLN02574 4-coumarate--CoA ligase-like
Probab=24.72 E-value=4.4e+02 Score=27.82 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=57.9
Q ss_pred eeccHHHHHHHHHHHH---H-hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 214 VLSHRGAYLMSLSVAL---I-WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
.+|+..+...+..... . .+++++|++....+-.. ..+...+.+...|+..+.+. .....++...+++.++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 4678877665554443 3 57899999998887543 22334455556666666554 45778899999999999998
Q ss_pred eCcHHHHHHH
Q 008389 289 AAPVVLNSIV 298 (567)
Q Consensus 289 ~~p~~~~~l~ 298 (567)
..+.....+.
T Consensus 145 ~~~~~~~~~~ 154 (560)
T PLN02574 145 TSPENVEKLS 154 (560)
T ss_pred ECHHHHHHHH
Confidence 8877665553
No 303
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=24.63 E-value=2e+02 Score=19.56 Aligned_cols=49 Identities=12% Similarity=0.171 Sum_probs=31.9
Q ss_pred ceEEEEEcCCccchhhHHHHHHHHHHHHhcCCCCCCCceeecCcccCCC
Q 008389 495 PCAFVTLKPEVDKSNEQQLAEDIMKFCRAKMPAYWVPKSIVFGPLPKTA 543 (567)
Q Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~lP~t~ 543 (567)
|.+.+...++.+....+++.+++.+.+.+.++.-..-..+.|.++|+..
T Consensus 2 P~i~i~~~~Grs~EqK~~L~~~it~a~~~~~~~p~~~v~V~i~ev~~~~ 50 (60)
T PRK02289 2 PFVRIDLFEGRSQEQKNALAREVTEVVSRIAKAPKEAIHVFINDMPEGT 50 (60)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEEeChhh
Confidence 4566777777656667777788888888877643333344556688654
No 304
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=24.35 E-value=3.7e+02 Score=28.43 Aligned_cols=80 Identities=13% Similarity=0.007 Sum_probs=55.6
Q ss_pred eeeccHHHHHHHHHHHHHh----ccCCCcEEEEecCccchhhhH-HHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceE
Q 008389 213 VVLSHRGAYLMSLSVALIW----GMNEGAVYLWTLPMFHCNGWC-YTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTH 286 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~~----~~~~~d~~~~~~p~~~~~g~~-~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~ 286 (567)
..+|...+..........+ +++++|++...++... .+. ..+.+...|+..+.+. .....++...+++.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~--e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVL--QYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 3678888877766655543 7889999998877543 333 3445555565555453 457789999999999999
Q ss_pred eeeCcHHH
Q 008389 287 FCAAPVVL 294 (567)
Q Consensus 287 l~~~p~~~ 294 (567)
++..+.+.
T Consensus 126 ~i~~~~~~ 133 (562)
T PRK12492 126 LVYLNMFG 133 (562)
T ss_pred EEeccccc
Confidence 98766543
No 305
>PRK12483 threonine dehydratase; Reviewed
Probab=24.32 E-value=5.6e+02 Score=26.95 Aligned_cols=62 Identities=15% Similarity=0.036 Sum_probs=45.7
Q ss_pred EEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHHH
Q 008389 75 IIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEALK 136 (567)
Q Consensus 75 l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (567)
+.+..+=....+.++|..+|..+..+=|...+..-...++..+++++++...+.+....+..
T Consensus 89 V~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~A~~ 150 (521)
T PRK12483 89 ITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHALK 150 (521)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHH
Confidence 33444556666778899999988888787777777788999999999998765554444433
No 306
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=24.32 E-value=2e+02 Score=25.14 Aligned_cols=46 Identities=4% Similarity=0.008 Sum_probs=31.3
Q ss_pred CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHh
Q 008389 43 STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFG 89 (567)
Q Consensus 43 ~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA 89 (567)
+.-+||.|+...+.++|..+.+. +.....+.+-..++-..++..+|
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La 59 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLL 59 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHH
Confidence 56789999999999999999875 22222344444555555555555
No 307
>PRK10595 SOS cell division inhibitor; Provisional
Probab=24.28 E-value=3.1e+02 Score=23.55 Aligned_cols=37 Identities=14% Similarity=-0.050 Sum_probs=19.8
Q ss_pred HHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCC
Q 008389 59 ASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGA 95 (567)
Q Consensus 59 A~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 95 (567)
+.+|.+.|+..+..+.|...+..+.+.++-=|++.|.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~ 106 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGN 106 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCC
Confidence 3445555665554444444455555555555555554
No 308
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=24.28 E-value=4.2e+02 Score=27.73 Aligned_cols=88 Identities=13% Similarity=0.024 Sum_probs=59.0
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCC-CCCEEEEEcCChHH-HHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIG-LGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~-~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.+|++.. +..+|++.+...+..++.. .++. ++|++....|-.-. .+..+++++..|+..+..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 4567777652 2568998887776665544 3677 88888887765432 2334677888898877654
Q ss_pred c-cC--ChHHHHHHHhccCceEEEE
Q 008389 102 I-RL--NAPTIAFLLGHSASAVIMV 123 (567)
Q Consensus 102 ~-~~--~~~~l~~~l~~~~~~~vi~ 123 (567)
. .+ .+..+...+++.++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 22 4567788888889886644
No 309
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=24.26 E-value=3.9e+02 Score=28.08 Aligned_cols=84 Identities=7% Similarity=-0.092 Sum_probs=57.5
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
..+|+..+...+...... .++.++|++....+...-+ ....+.+...|+..+.+. .....++...++..++..++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 457888887766666554 4789999988887754322 223344455566655553 45678999999999999998
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
....+...+
T Consensus 117 ~~~~~~~~~ 125 (542)
T PRK06018 117 TDLTFVPIL 125 (542)
T ss_pred EccccHHHH
Confidence 877655444
No 310
>PRK08246 threonine dehydratase; Provisional
Probab=23.74 E-value=6.6e+02 Score=24.19 Aligned_cols=61 Identities=15% Similarity=0.101 Sum_probs=44.4
Q ss_pred CCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHH
Q 008389 69 LGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKL 130 (567)
Q Consensus 69 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (567)
+++.|... ..+-.-..+.++|...|..+..+-|...++....+++..++++++++..+...
T Consensus 67 ~~~~vv~a-SsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 127 (310)
T PRK08246 67 PAAGVVAA-SGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYADA 127 (310)
T ss_pred cCCeEEEe-CCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHHHH
Confidence 45555443 44555666677888899888877776666777789999999999998754433
No 311
>PRK08526 threonine dehydratase; Provisional
Probab=23.64 E-value=5.9e+02 Score=25.72 Aligned_cols=59 Identities=14% Similarity=-0.079 Sum_probs=43.9
Q ss_pred cCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHHH
Q 008389 77 APNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEAL 135 (567)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 135 (567)
+..+=....+.++|.++|..+..+-|...+..-...++..++.++++...+.+....+.
T Consensus 74 aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a~~~a~ 132 (403)
T PRK08526 74 ASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEAYAFAL 132 (403)
T ss_pred ECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHHH
Confidence 55555566777889999988888878766666667799999999999876555444433
No 312
>PRK13390 acyl-CoA synthetase; Provisional
Probab=23.54 E-value=8.2e+02 Score=25.19 Aligned_cols=79 Identities=15% Similarity=0.074 Sum_probs=55.2
Q ss_pred eeeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEee
Q 008389 213 VVLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~ 288 (567)
-.+|+..+...+...... .++.++|++....+... ..+...+.+...|+..+.+ ....+.++...++..++..+.
T Consensus 23 ~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~-~~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i 101 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSP-EALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLV 101 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEE
Confidence 358888887766666554 47889999988877644 2233445556666666555 346778888899998988887
Q ss_pred eCcH
Q 008389 289 AAPV 292 (567)
Q Consensus 289 ~~p~ 292 (567)
....
T Consensus 102 ~~~~ 105 (501)
T PRK13390 102 ASAA 105 (501)
T ss_pred Ecch
Confidence 7654
No 313
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.51 E-value=2.2e+02 Score=29.90 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=58.7
Q ss_pred ccccHHHHHHHHHHHHHHHH-HccCCCCCEEEEEcCChHH-HHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEE
Q 008389 44 TRYTWLQTYQRCRRLASALC-KRSIGLGCTVAIIAPNIPA-IYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVI 121 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~-~~g~~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~v 121 (567)
..+|.+.+.... .+..+. ..++.++|++..+.|-.-. .....++++..|+.++...+...++.+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 456766654322 222222 3478889988877764322 233347778899988877677888999999999999999
Q ss_pred EEcccchHHHH
Q 008389 122 MVDQEYFKLAE 132 (567)
Q Consensus 122 i~~~~~~~~~~ 132 (567)
...+.....+.
T Consensus 272 ~~~P~~~~~l~ 282 (539)
T PRK07008 272 AGVPTVWLGLL 282 (539)
T ss_pred EechHHHHHHH
Confidence 88777655443
No 314
>PRK05638 threonine synthase; Validated
Probab=23.29 E-value=3.6e+02 Score=27.68 Aligned_cols=91 Identities=10% Similarity=-0.050 Sum_probs=54.1
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLL 113 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l 113 (567)
++.+-.+. -+-||++=- ....+...+ +.| .+.|+. ...+-.-..+..+|.+.|..+..+-|...+..-...+
T Consensus 81 ~l~~K~E~~nPtGSfKdR~-a~~~i~~a~-~~g---~~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~ 154 (442)
T PRK05638 81 NVYIKDETRNPTGSFRDRL-ATVAVSYGL-PYA---ANGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQM 154 (442)
T ss_pred eEEEEeCCCCCCCChHHHH-HHHHHHHHH-HcC---CCEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHH
Confidence 45554433 566677622 222222222 332 344544 4444445555566678888877777765666667899
Q ss_pred hccCceEEEEcccchHHHH
Q 008389 114 GHSASAVIMVDQEYFKLAE 132 (567)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~ 132 (567)
+..+++++.++....+...
T Consensus 155 ~~~GA~vi~v~~~~~~~~~ 173 (442)
T PRK05638 155 IAFGAKIIRYGESVDEAIE 173 (442)
T ss_pred HhcCcEEEEECCCHHHHHH
Confidence 9999999999876544443
No 315
>PLN02409 serine--glyoxylate aminotransaminase
Probab=23.24 E-value=6.8e+02 Score=25.13 Aligned_cols=74 Identities=12% Similarity=-0.036 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHc-cCCCCCEEEEEcCChHHHHH-HHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEc
Q 008389 50 QTYQRCRRLASALCKR-SIGLGCTVAIIAPNIPAIYE-AHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 50 el~~~~~~lA~~L~~~-g~~~gd~V~l~~~~~~~~~~-~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~ 124 (567)
++.+..+++...|.+. |...++ +.++..++...+. ++..++.-|-.++..++.........+++..+.+++...
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~-~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGT-PFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC-EEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 3444444444444433 554444 4444444444433 334455666655555555444444556666666666554
No 316
>PRK06721 threonine synthase; Reviewed
Probab=23.08 E-value=4.7e+02 Score=25.78 Aligned_cols=88 Identities=7% Similarity=-0.171 Sum_probs=51.4
Q ss_pred ceeEEECC--ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccC-ChHHHHHH
Q 008389 36 RTSVVHGS--TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRL-NAPTIAFL 112 (567)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~-~~~~l~~~ 112 (567)
++.+-.++ .+-|+++--.. .+.....+.|. ++|.. ...+-.-..+.++|...|..+..+-|.. .+..-...
T Consensus 44 ~i~~K~E~~nptGS~KdR~a~--~~i~~a~~~g~---~~vV~-aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~ 117 (352)
T PRK06721 44 QLYGKYEGANPTGSFKDRGMV--MAVAKAKEEGS---EAIIC-ASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQ 117 (352)
T ss_pred eEEEEecCCCCccchHHHHHH--HHHHHHHHCCC---CEEEE-ECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHH
Confidence 45555544 33445543222 22222334442 33433 3344455566677888998877777754 34555668
Q ss_pred HhccCceEEEEcccchH
Q 008389 113 LGHSASAVIMVDQEYFK 129 (567)
Q Consensus 113 l~~~~~~~vi~~~~~~~ 129 (567)
++..++++++++..+..
T Consensus 118 ~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 118 AVAYGAEIISIEGNFDD 134 (352)
T ss_pred HHHcCCEEEEECCCHHH
Confidence 89999999999876544
No 317
>PRK08813 threonine dehydratase; Provisional
Probab=22.98 E-value=7.4e+02 Score=24.46 Aligned_cols=84 Identities=13% Similarity=-0.085 Sum_probs=53.3
Q ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEE
Q 008389 44 TRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMV 123 (567)
Q Consensus 44 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~ 123 (567)
.+-||++--.. ..+. .+.+.+...+ .+....+=.-....++|...|..+..+-|...+..-...++.+++.++.+
T Consensus 59 ptGSfK~RgA~-~~l~-~a~~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~ 133 (349)
T PRK08813 59 RTGSYKVRGAL-NALL-AGLERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQH 133 (349)
T ss_pred CcCCCHHHHHH-HHHH-HHHHcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEE
Confidence 55566543222 2233 3334443323 34445556666777889999988877777666667778889999999999
Q ss_pred cccchHHHH
Q 008389 124 DQEYFKLAE 132 (567)
Q Consensus 124 ~~~~~~~~~ 132 (567)
...+.+...
T Consensus 134 g~~~~~a~~ 142 (349)
T PRK08813 134 GNSYDEAYA 142 (349)
T ss_pred CCCHHHHHH
Confidence 876544433
No 318
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=22.78 E-value=5.5e+02 Score=22.84 Aligned_cols=98 Identities=5% Similarity=-0.091 Sum_probs=64.1
Q ss_pred CCccccHHHHHHHHHHHHHHHHHc-------cCCCCCEEEEEcCCh----HHHHHHHHhhhhcCCeeeeccccCChHHHH
Q 008389 42 GSTRYTWLQTYQRCRRLASALCKR-------SIGLGCTVAIIAPNI----PAIYEAHFGVPMAGAVLNAVNIRLNAPTIA 110 (567)
Q Consensus 42 ~~~~~Ty~el~~~~~~lA~~L~~~-------g~~~gd~V~l~~~~~----~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~ 110 (567)
...+++..|..-.+..+-..+... .-..+-+|.+.+..+ ....++...+-..|.-++.+..+.+.+++.
T Consensus 47 ~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~ 126 (201)
T cd02070 47 EEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFV 126 (201)
T ss_pred ccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 456788888777666555544432 221234666665443 233444445556799999999999999999
Q ss_pred HHHhccCceEEEEccc---chHHHHHHHHHHh
Q 008389 111 FLLGHSASAVIMVDQE---YFKLAEEALKIME 139 (567)
Q Consensus 111 ~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (567)
..+.+.+|++|..+-. ....+.+..+.+.
T Consensus 127 ~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr 158 (201)
T cd02070 127 EAVKEHKPDILGLSALMTTTMGGMKEVIEALK 158 (201)
T ss_pred HHHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 9999999999987653 3444555555554
No 319
>PRK06145 acyl-CoA synthetase; Validated
Probab=22.76 E-value=6.6e+02 Score=25.84 Aligned_cols=95 Identities=7% Similarity=0.021 Sum_probs=63.5
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChH--HHHHHHHhhhhcCCeeeecc
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIP--AIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~i~ 101 (567)
.++.++++.. ...+|++.+...+. ......++..+|++....|-.- .+....++++..|+..+..
T Consensus 147 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~- 222 (497)
T PRK06145 147 APTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH- 222 (497)
T ss_pred CccceEEEEeCCCCCCCCcEEEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-
Confidence 4566776542 25688888765443 2334458899999888776432 2223345667777776554
Q ss_pred ccCChHHHHHHHhccCceEEEEcccchHHH
Q 008389 102 IRLNAPTIAFLLGHSASAVIMVDQEYFKLA 131 (567)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (567)
+..++..+...+++.++..+...+.....+
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 252 (497)
T PRK06145 223 REFDPEAVLAAIERHRLTCAWMAPVMLSRV 252 (497)
T ss_pred CcCCHHHHHHHHHHhCCeEEEehHHHHHHH
Confidence 567889999999999999998877655443
No 320
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=22.36 E-value=4.7e+02 Score=26.46 Aligned_cols=60 Identities=12% Similarity=-0.037 Sum_probs=46.3
Q ss_pred EEEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHH
Q 008389 74 AIIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEE 133 (567)
Q Consensus 74 ~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (567)
.+....+=.-....++|...|..+..+-|...+..-...++..+++++.++.++......
T Consensus 137 VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~~ 196 (404)
T cd06447 137 IAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVEE 196 (404)
T ss_pred EEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHHH
Confidence 344555566667778999999988888887788888899999999999998765554433
No 321
>PRK06060 acyl-CoA synthetase; Validated
Probab=22.31 E-value=4.8e+02 Score=28.66 Aligned_cols=81 Identities=11% Similarity=-0.011 Sum_probs=55.0
Q ss_pred eeccHHHHHHHHHHHHH---hccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALI---WGMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+...... .++.+++++...++-...+ +...+.++..|+..+.+. .....++...+++.++.++++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 47888887766665544 4789999999888764322 233445555666555553 456678888888999998887
Q ss_pred CcHHHH
Q 008389 290 APVVLN 295 (567)
Q Consensus 290 ~p~~~~ 295 (567)
......
T Consensus 109 ~~~~~~ 114 (705)
T PRK06060 109 SDALRD 114 (705)
T ss_pred chHHhh
Confidence 655443
No 322
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.79 E-value=4.3e+02 Score=27.89 Aligned_cols=81 Identities=11% Similarity=-0.005 Sum_probs=56.3
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEe-ccCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICL-RQVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|...+...+......+ +++.+|++...++-...+ +...+.+...|+..+.+ +.....++...++..+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 478888877766655543 788899999888764432 33445555566555555 3466788999999999999988
Q ss_pred CcHHHH
Q 008389 290 APVVLN 295 (567)
Q Consensus 290 ~p~~~~ 295 (567)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 775544
No 323
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=21.76 E-value=5.5e+02 Score=24.35 Aligned_cols=55 Identities=16% Similarity=0.125 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecccc----------CChHHHHHHHhc-cCceEEEEc
Q 008389 67 IGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVNIR----------LNAPTIAFLLGH-SASAVIMVD 124 (567)
Q Consensus 67 ~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~~~----------~~~~~l~~~l~~-~~~~~vi~~ 124 (567)
+++||.|.+.-+...- ..-++...|+.++.+++. .+.+.+...++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5689988876554322 233455678877776542 457888888864 467765543
No 324
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=21.69 E-value=3.2e+02 Score=26.04 Aligned_cols=64 Identities=14% Similarity=0.012 Sum_probs=47.9
Q ss_pred cCCCCCEEEEEcCChHHHHHHHHhhhhcCCeee-eccccCChHHHHHHHhccCceEEEEcccchH
Q 008389 66 SIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLN-AVNIRLNAPTIAFLLGHSASAVIMVDQEYFK 129 (567)
Q Consensus 66 g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v-~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (567)
.+++||.|.--..||.---+.+-=|-..|..-+ .+...-..+++...|...++..||++.+...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 678999998888887655444444555565444 4455667899999999999999999887654
No 325
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.50 E-value=6.8e+02 Score=26.23 Aligned_cols=93 Identities=10% Similarity=-0.018 Sum_probs=60.9
Q ss_pred CCCceeEEEC---------CccccHHHHHHHHHHHHHHHHHccCCCC-CEEEEEcCCh--HHHHHHHHhhhhcCCeeeec
Q 008389 33 HPTRTSVVHG---------STRYTWLQTYQRCRRLASALCKRSIGLG-CTVAIIAPNI--PAIYEAHFGVPMAGAVLNAV 100 (567)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~lA~~L~~~g~~~g-d~V~l~~~~~--~~~~~~~lA~~~~G~~~v~i 100 (567)
.++.++++.. ...+|++.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 4567777653 256888888765554433 3467776 7877776654 44455566778889887777
Q ss_pred ccc---CChHHHHHHHhccCceEEEEcccch
Q 008389 101 NIR---LNAPTIAFLLGHSASAVIMVDQEYF 128 (567)
Q Consensus 101 ~~~---~~~~~l~~~l~~~~~~~vi~~~~~~ 128 (567)
.+. ..+..+..++++.++.++.+.....
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 257 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFAY 257 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHHH
Confidence 553 2456677889999999876544433
No 326
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members. are a sub-families of this Pfam.; InterPro: IPR000891 Pyruvate carboxylase (6.4.1.1 from EC) (PC), a member of the biotin-dependent enzyme family, is involved in the gluconeogenesis by mediating the carboxylation of pyruvate to oxaloacetate. Biotin-dependent carboxylase enzymes perform a two step reaction. Enzyme-bound biotin is first carboxylated by bicarbonate and ATP and the carboxyl group temporarily bound to biotin is subsequently transferred to an acceptor substrate such as pyruvate []. PC has three functional domains: a biotin carboxylase (BC) domain, a carboxyltransferase (CT) domain which perform the second part of the reaction and a biotinyl domain [, ]. The mechanism by which the carboxyl group is transferred from the carboxybiotin to the pyruvate is not well understood. The pyruvate carboxyltransferase domain is also found in other pyruvate binding enzymes and acetyl-CoA dependent enzymes suggesting that this domain can be associated with different enzymatic activities. This domain is found towards the N-terminal region of various aldolase enzymes. This N-terminal TIM barrel domain [] interacts with the C-terminal domain. The C-terminal DmpG_comm domain (IPR012425 from INTERPRO) is thought to promote heterodimerisation with members of IPR003361 from INTERPRO to form a bifunctional aldolase-dehydrogenase []. ; GO: 0003824 catalytic activity; PDB: 3MP5_E 3MP3_E 2CW6_E 3MP4_D 3HBL_A 3HB9_C 3HO8_A 3BG5_C 1YDN_B 3RMJ_A ....
Probab=21.33 E-value=3.4e+02 Score=24.79 Aligned_cols=71 Identities=17% Similarity=-0.007 Sum_probs=46.9
Q ss_pred HHHHHhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHH-HHHHHhhhhcCCeee
Q 008389 22 PLWFLDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAI-YEAHFGVPMAGAVLN 98 (567)
Q Consensus 22 ~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v 98 (567)
+.++.+...+..++.+.+.+-....+=.++.+.+..+...+- .-.+.+++-|...+ ++..++++.+|+..+
T Consensus 139 ~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~v~~lv~~~~~~~~------~~~l~~H~Hnd~Gla~An~laA~~aGa~~i 210 (237)
T PF00682_consen 139 LLELAEALAEAGADIIYLADTVGIMTPEDVAELVRALREALP------DIPLGFHAHNDLGLAVANALAALEAGADRI 210 (237)
T ss_dssp HHHHHHHHHHHT-SEEEEEETTS-S-HHHHHHHHHHHHHHST------TSEEEEEEBBTTS-HHHHHHHHHHTT-SEE
T ss_pred HHHHHHHHHHcCCeEEEeeCccCCcCHHHHHHHHHHHHHhcc------CCeEEEEecCCccchhHHHHHHHHcCCCEE
Confidence 445666666667888888887777777776666665555542 25789999887765 556699999998875
No 327
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=21.30 E-value=2.1e+02 Score=22.78 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=31.0
Q ss_pred HHHHHHHHHccCCCCCEEEEEcCC-hHHHHHHHHhhhhcCCe
Q 008389 56 RRLASALCKRSIGLGCTVAIIAPN-IPAIYEAHFGVPMAGAV 96 (567)
Q Consensus 56 ~~lA~~L~~~g~~~gd~V~l~~~~-~~~~~~~~lA~~~~G~~ 96 (567)
..+.+.+.+.++.+++.|.++|.. +.....+...+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 455666777788899999999988 46666667777778864
No 328
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=20.98 E-value=4.2e+02 Score=20.90 Aligned_cols=56 Identities=11% Similarity=0.058 Sum_probs=40.5
Q ss_pred HHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEccc---chHHHHHHHHHHh
Q 008389 84 YEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQE---YFKLAEEALKIME 139 (567)
Q Consensus 84 ~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (567)
......+-..|..++.+.+..+.+++...+.+.++++|..+.. ....+.+..+.+.
T Consensus 17 ~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 17 NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 3334444557999999999999999999999999999887643 3444455444444
No 329
>PRK06110 hypothetical protein; Provisional
Probab=20.97 E-value=7e+02 Score=24.19 Aligned_cols=60 Identities=17% Similarity=0.052 Sum_probs=42.2
Q ss_pred EEcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHHH
Q 008389 75 IIAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEEA 134 (567)
Q Consensus 75 l~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (567)
+-...+-.-..+.++|...|..+..+-|...+..-...++..+++++.++..+.+.....
T Consensus 74 v~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~a 133 (322)
T PRK06110 74 ISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQAAREEA 133 (322)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHH
Confidence 334455666677788889998877776655555556889999999999976654444433
No 330
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=20.93 E-value=2.5e+02 Score=30.79 Aligned_cols=98 Identities=17% Similarity=0.059 Sum_probs=58.7
Q ss_pred HHHHhhhhhcC-CCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEcCChHHHHHHHHhhhhcCCeeeecc
Q 008389 23 LWFLDRAATVH-PTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIAPNIPAIYEAHFGVPMAGAVLNAVN 101 (567)
Q Consensus 23 ~~~l~~~a~~~-p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~i~ 101 (567)
.+.=+..|+-+ .|+..+...+.+-. .+ +. +.. -+.+||.|. +-.|+--.+.. |+...|+.++.+.
T Consensus 198 ~eAe~~AA~~fgAd~tyfvvNGTS~~--------n~-av-~~a-~~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~ 263 (714)
T PRK15400 198 KEAEEYIARVFNADRSYMVTNGTSTA--------NK-IV-GMY-SAPAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFR 263 (714)
T ss_pred HHHHHHHHHHhCCCcEEEEeCchHHH--------HH-HH-HHH-hcCCCCEEE-eecccHHHHHH--HHHHcCCeEEEec
Confidence 34444455544 36666666654432 11 11 111 257899665 46666666544 9999999999998
Q ss_pred ccC---------C-----hHHHHHHHhcc-Cce----EEEEcccchHHHHHH
Q 008389 102 IRL---------N-----APTIAFLLGHS-ASA----VIMVDQEYFKLAEEA 134 (567)
Q Consensus 102 ~~~---------~-----~~~l~~~l~~~-~~~----~vi~~~~~~~~~~~~ 134 (567)
|.. + .+.+...++.. +++ ++|+++.+.....++
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~ 315 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNT 315 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCH
Confidence 864 3 56777777654 233 778877765544433
No 331
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=20.86 E-value=7.5e+02 Score=23.94 Aligned_cols=54 Identities=9% Similarity=-0.061 Sum_probs=41.1
Q ss_pred EcCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchH
Q 008389 76 IAPNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFK 129 (567)
Q Consensus 76 ~~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (567)
....+-.-..+.++|...|..+..+-|...+..-...++..++++++++..+..
T Consensus 72 ~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (317)
T TIGR02991 72 AASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQDD 125 (317)
T ss_pred EECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHHH
Confidence 334455566677888889998877777666677788899999999999875443
No 332
>PRK08638 threonine dehydratase; Validated
Probab=20.85 E-value=7.3e+02 Score=24.24 Aligned_cols=57 Identities=5% Similarity=-0.043 Sum_probs=43.0
Q ss_pred cCChHHHHHHHHhhhhcCCeeeeccccCChHHHHHHHhccCceEEEEcccchHHHHH
Q 008389 77 APNIPAIYEAHFGVPMAGAVLNAVNIRLNAPTIAFLLGHSASAVIMVDQEYFKLAEE 133 (567)
Q Consensus 77 ~~~~~~~~~~~lA~~~~G~~~v~i~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (567)
...+-.-....++|...|..+..+-|...+..-...++..++++++++....+....
T Consensus 81 ~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~ 137 (333)
T PRK08638 81 CSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTIAK 137 (333)
T ss_pred eCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHHHHH
Confidence 444555667778889999988888787666777889999999999997665444433
No 333
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=20.28 E-value=92 Score=21.16 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=15.7
Q ss_pred cCceEEEeCCCcEEEeccccc
Q 008389 434 TGDLGVKHPDNYIEIKDRSKD 454 (567)
Q Consensus 434 TGDl~~~~~~g~l~~~GR~~d 454 (567)
-|.+.+.++||.+.+.|+.=|
T Consensus 32 ~~~i~Y~~~dg~yli~G~l~d 52 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQLYD 52 (57)
T ss_dssp TTEEEEEETTSSEEEES-EEE
T ss_pred CCeEEEEcCCCCEEEEeEEEe
Confidence 456888999999999887543
No 334
>PRK07867 acyl-CoA synthetase; Validated
Probab=20.24 E-value=7.2e+02 Score=26.02 Aligned_cols=83 Identities=12% Similarity=-0.138 Sum_probs=57.4
Q ss_pred eeccHHHHHHHHHHHHHh----ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEee
Q 008389 214 VLSHRGAYLMSLSVALIW----GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFC 288 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~----~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 288 (567)
.+|+..+...+..+...+ +..+++++...++-.. -.....+.+...|+..+.+. ...+.++...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 578888877766655543 4667888887777432 22234455566677666564 46788999999999999999
Q ss_pred eCcHHHHHH
Q 008389 289 AAPVVLNSI 297 (567)
Q Consensus 289 ~~p~~~~~l 297 (567)
+.......+
T Consensus 107 ~~~~~~~~~ 115 (529)
T PRK07867 107 TESAHAELL 115 (529)
T ss_pred ECHhHHHHH
Confidence 987766543
No 335
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=20.21 E-value=4.1e+02 Score=22.87 Aligned_cols=90 Identities=11% Similarity=-0.058 Sum_probs=53.6
Q ss_pred HhhhhhcCCCceeEEECCccccHHHHHHHHHHHHHHHHHccCCCCCEEEEEc-CChHHHHHHHHhhhhcC--Ceeeeccc
Q 008389 26 LDRAATVHPTRTSVVHGSTRYTWLQTYQRCRRLASALCKRSIGLGCTVAIIA-PNIPAIYEAHFGVPMAG--AVLNAVNI 102 (567)
Q Consensus 26 l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~l~~-~~~~~~~~~~lA~~~~G--~~~v~i~~ 102 (567)
|-|+++..+..+.+-+.++.+|=+=. ..+.++|++|.++|+.+ |+|.+-- -...+..-.+.+++-.. .++--+.|
T Consensus 6 LmRHgkA~~~~~~~~D~dR~Lt~~G~-~ea~~~a~~L~~~~~~~-D~VL~Spa~Ra~QTae~v~~~~~~~~~~~~~~l~p 83 (163)
T COG2062 6 LMRHGKAEWAAPGIADFDRPLTERGR-KEAELVAAWLAGQGVEP-DLVLVSPAVRARQTAEIVAEHLGEKKVEVFEELLP 83 (163)
T ss_pred EeecccccccCCCCCCccCcCCHHHH-HHHHHHHHHHHhcCCCC-CEEEeChhHHHHHHHHHHHHhhCcccceeccccCC
Confidence 34667777777777788888886654 45889999999999844 4554422 12233333333333322 33334445
Q ss_pred cCChHHHHHHHhccC
Q 008389 103 RLNAPTIAFLLGHSA 117 (567)
Q Consensus 103 ~~~~~~l~~~l~~~~ 117 (567)
.-.+..+...++...
T Consensus 84 ~~d~~~~l~~l~~~~ 98 (163)
T COG2062 84 NGDPGTVLDYLEALG 98 (163)
T ss_pred CCCHHHHHHHHHHhc
Confidence 656666666655544
No 336
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=20.20 E-value=4.8e+02 Score=26.12 Aligned_cols=49 Identities=12% Similarity=0.034 Sum_probs=21.9
Q ss_pred EcCChHHHHH-HHHhhhhcCCeeeeccccCCh--HHHHHHHhccCceEEEEc
Q 008389 76 IAPNIPAIYE-AHFGVPMAGAVLNAVNIRLNA--PTIAFLLGHSASAVIMVD 124 (567)
Q Consensus 76 ~~~~~~~~~~-~~lA~~~~G~~~v~i~~~~~~--~~l~~~l~~~~~~~vi~~ 124 (567)
..+++.+.+. ++.+++..|-.++..++.+.. ..+..+.......+.+.+
T Consensus 71 ~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d 122 (382)
T TIGR02080 71 VTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD 122 (382)
T ss_pred EEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC
Confidence 3444444433 333455556555555555542 222233344445555554
No 337
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=20.19 E-value=5.8e+02 Score=25.98 Aligned_cols=78 Identities=12% Similarity=-0.030 Sum_probs=55.4
Q ss_pred eeccHHHHHHHHHHHHHh---ccCCCcEEEEecCccchhhhHHHHHHhhhcCeeEEec-cCCHHHHHHHHHhhCceEeee
Q 008389 214 VLSHRGAYLMSLSVALIW---GMNEGAVYLWTLPMFHCNGWCYTWSLAALCGTSICLR-QVTAKAVYSAIAKYGVTHFCA 289 (567)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~l~~ 289 (567)
.+|+..+...+......+ ++.+++++....+... ......+.+...|+..+.+. ......+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~-~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSP-ETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 578888877776666554 7889999888877543 22334456666677776664 456788888999999988887
Q ss_pred CcH
Q 008389 290 APV 292 (567)
Q Consensus 290 ~p~ 292 (567)
...
T Consensus 107 ~~~ 109 (458)
T PRK09029 107 LEG 109 (458)
T ss_pred cCc
Confidence 554
No 338
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=20.12 E-value=4.4e+02 Score=26.39 Aligned_cols=11 Identities=9% Similarity=-0.085 Sum_probs=5.4
Q ss_pred cHHHHHHHHHH
Q 008389 47 TWLQTYQRCRR 57 (567)
Q Consensus 47 Ty~el~~~~~~ 57 (567)
|+.+|.++..+
T Consensus 54 ~~~~lE~~lA~ 64 (385)
T PRK08574 54 TLRPLEEALAK 64 (385)
T ss_pred cHHHHHHHHHH
Confidence 55555554433
Done!