Citrus Sinensis ID: 008395

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------
MLKPQVHQSHQSLKPLVPLSKPFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
cccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEEEEEEEEEEEEEEEEEEccccccccccccHHHHcccccEEEEEEEEEccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEEEccccEEEEEEEEEEccccccEEEEEcccEEccccccccEEEEcccccccccccHHHHHHHHHHHHHHcccccccEEEccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccHHHHcccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHcccEEEEEccccccccccccccccccEEEccEEEEEEccccccccEEEEEEcccccccccccEEEEccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHccccccc
ccccHHccccccccccccccccccccccccccccccccccccccEEEEEEEccEcEEEEEEcccccEEEEEEEEEEccHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccHHHHHHcccccccccEEEEEEEEEccccccccEEEEEEccccEEEEEEEEEcccccccEEEEEEEEEcEHHHccccEEEEccccccHHHccHHHHHHHHHHHHHHHcccccccccccccccEEcEcccccHHHcHHHccccEcccccccccEEcccccEcccccccEcccccccccHHHccccccHHHcHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHcccccccccHHHHHHHHccccccHHHHcEEccccEEEccccHHHcccccHHHcHHHHHHHHHHcccccccEEcccccccccccHHHHccccccccHHHcccccccccHHHHHHHcccEEEEEcHHHHHHHHHHHHccccccccEEEEEEEEcccccEEEEEEEEEccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
mlkpqvhqshqslkplvplskpflrgnFHAFralqssssiknipkirigispsvnIKAITTFTQKSTQVKAFVTikpsvgglvsgfvDDVKDMFGKSLLLELVSaeldpktgaekptikgfahragedkdghiiyeskfevppsfgeVGAILVEnehhkemylndivldgprngpvnitcgswvqskhvnkqkrifftnksylpsqtpngltRLRAEELLNLrgdgqgerkthdriydydvyndlgvpdfcselarpvlggkehpyprrcrtgrppcetdpasesrtlinyvprdeaFSEIKQLQFSAKTLYSVLHGLvpsletaiidtdlgfpyFTTIDKLFnegvnvpmpetfkEKALWRTILPRLVKGIEDTGKevlrfetpetmdrdkffwfrdeefgrqtlaglnpysirlvtewplrstldpeiygppesaITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELkgttlygsrtlffsypsgtlrplaieltrppmdgkpqwkqvftpswhstECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
mlkpqvhqshqslkplvplSKPFLRGNFHAFRalqssssiknipkirigispsvNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSaeldpktgaekptiKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFftnksylpsqtpnglTRLRAEELLnlrgdgqgerkthdriyDYDVYNDLGVPDFCSELARpvlggkehpyprrcrtgrppcetdpasesrTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRlvkgiedtgkevlrfetpetmdrdkFFWFRDEEFgrqtlaglnpysIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTlffsypsgtlrPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
MLKPQVHQSHQSLKPLVPLSKPFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
********************KPFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAEL*************F*******KDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLP**************LL***********THDRIYDYDVYNDLGVPDFCSELARPVLG***************************LINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYS****
*****************************************************************STQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLEL*******************AHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGR**********SRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRP******QW**VFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
************LKPLVPLSKPFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
*******QSHQSLKPLVPLSKPFLRG**************KNIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSI**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
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MLKPQVHQSHQSLKPLVPLSKPFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSITS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query567 2.2.26 [Sep-21-2011]
O24370 899 Linoleate 13S-lipoxygenas N/A no 0.973 0.614 0.617 0.0
Q84YK8 941 Probable lipoxygenase 8, yes no 0.844 0.509 0.544 1e-152
P38419 924 Lipoxygenase 7, chloropla no no 0.844 0.518 0.546 1e-152
Q8GSM2 896 Lipoxygenase 2.3, chlorop N/A no 0.873 0.552 0.549 1e-151
P38418 896 Lipoxygenase 2, chloropla yes no 0.843 0.533 0.513 1e-142
P93184 936 Lipoxygenase 2.1, chlorop N/A no 0.902 0.547 0.514 1e-139
Q8GSM3 932 Lipoxygenase 2.2, chlorop N/A no 0.931 0.566 0.476 1e-129
Q8H016 918 Probable lipoxygenase 6 O no no 0.924 0.570 0.436 1e-123
Q9LNR3 919 Lipoxygenase 3, chloropla no no 0.851 0.525 0.451 1e-119
Q9FNX8 926 Lipoxygenase 4, chloropla no no 0.818 0.501 0.459 1e-118
>sp|O24370|LOX21_SOLTU Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1 Back     alignment and function desciption
 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/562 (61%), Positives = 425/562 (75%), Gaps = 10/562 (1%)

Query: 1   MLKPQVHQSHQSLKPLVPL--SKPFLRGNFHAFRALQSSSSIKNIPKIRI--GISPSVNI 56
           MLKPQ+ QS QS K L+P   + P    +F     L  +  +K     R+    + +   
Sbjct: 1   MLKPQLQQSSQSTKALIPSWNTNPLFLASF-PINILNKNFRLKKKNNFRVHHNYNGASTT 59

Query: 57  KAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKP 116
           KA+ + T+K+T VKA VT++  V   +S  +DD+ D+ GKSLLL +V+AELD KTG EKP
Sbjct: 60  KAVLSSTEKATGVKAVVTVQKQVNLNLSRGLDDIGDLLGKSLLLWIVAAELDHKTGIEKP 119

Query: 117 TIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPV 176
            I+ +AHR G D DG   YE+ F +P  FGEVGAIL+ENEHHKEMY+ +IV+DG  +G V
Sbjct: 120 GIRAYAHR-GRDVDGDTHYEADFVIPQDFGEVGAILIENEHHKEMYVKNIVIDGFVHGKV 178

Query: 177 NITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRI 236
            ITC SWV SK  N  KRIFFTNKSYLPSQTP+G++RLR EEL+ LRGDG GERK  +RI
Sbjct: 179 EITCNSWVHSKFDNPDKRIFFTNKSYLPSQTPSGVSRLREEELVTLRGDGIGERKVFERI 238

Query: 237 YDYDVYNDLGVPDFCSELA-RPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRD 295
           YDYDVYNDLG  D  ++ A RPVLGGKE PYPRRC+TGRP  + DP SE+R+   YVPRD
Sbjct: 239 YDYDVYNDLGEADSNNDDAKRPVLGGKELPYPRRCKTGRPRSKKDPLSETRSTFVYVPRD 298

Query: 296 EAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETF 355
           EAFSE+K + FS  T+YSVLH +VP+LE+ + D +LGFP+F  ID LFN GV+  +P   
Sbjct: 299 EAFSEVKSVAFSGNTVYSVLHAVVPALESVVTDPNLGFPHFPAIDSLFNVGVD--LPGLG 356

Query: 356 KEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIR 415
            +K+    ++PRL+K I DT K+VL FE+P+ + RDKF WFRD EF RQTLAGLNPYSIR
Sbjct: 357 DKKSGLFNVVPRLIKAISDTRKDVLLFESPQLVQRDKFSWFRDVEFARQTLAGLNPYSIR 416

Query: 416 LVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYV 475
           LVTEWPLRS LDP++YGPPES ITKELIEKEIG  MTVE+A++QKKLFILDYHDLLLPYV
Sbjct: 417 LVTEWPLRSKLDPKVYGPPESEITKELIEKEIGNYMTVEQAVQQKKLFILDYHDLLLPYV 476

Query: 476 EKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPS-WHSTECWL 534
            KV ELKG+ LYGSRT+FF  P GTL+PLAIELTRPP+D KPQWK+V++P+ W++T  WL
Sbjct: 477 NKVNELKGSMLYGSRTIFFLTPQGTLKPLAIELTRPPVDDKPQWKEVYSPNDWNATGAWL 536

Query: 535 WRLAKAHVLAHDSGYHQLVSHW 556
           W+LAKAHVL+HDSGYHQLVSHW
Sbjct: 537 WKLAKAHVLSHDSGYHQLVSHW 558
Plant lipoxygenase involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence. May not be involved in the bulk production of jasmonate upon wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Linolenic acid is the preferred substrate, before linoleic and arachidonic acids. Has also some activity with phosphatidylglycerol, but not with galactolipids.
Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 1EC: 2
>sp|Q84YK8|LOXC2_ORYSJ Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1 Back     alignment and function description
>sp|P38419|LOXC1_ORYSJ Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2 Back     alignment and function description
>sp|Q8GSM2|LOX23_HORVU Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1 Back     alignment and function description
>sp|P38418|LOX2_ARATH Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1 Back     alignment and function description
>sp|P93184|LOX21_HORVU Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM3|LOX22_HORVU Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1 Back     alignment and function description
>sp|Q8H016|LOX6_ORYSJ Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2 Back     alignment and function description
>sp|Q9LNR3|LOX3_ARATH Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9FNX8|LOX4_ARATH Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query567
224053392 897 predicted protein [Populus trichocarpa] 0.962 0.608 0.671 0.0
213876486 900 lipoxygenase [Camellia sinensis] 0.966 0.608 0.668 0.0
224103783565 predicted protein [Populus trichocarpa] 0.973 0.976 0.660 0.0
71999169 898 lipoxygenase LOX1 [Populus deltoides] 0.964 0.609 0.657 0.0
229554825 901 lipoxygenase [Camellia sinensis] 0.964 0.607 0.656 0.0
308943877 901 lipoxygenase [Camellia sinensis] 0.964 0.607 0.657 0.0
71999171 903 lipoxygenase LOX2 [Populus deltoides] 0.971 0.610 0.664 0.0
255544764 900 lipoxygenase, putative [Ricinus communis 0.968 0.61 0.659 0.0
312837045 889 lipoxygenase [Vitis hybrid cultivar] 0.970 0.618 0.620 0.0
32454712 900 lipoxygenase, partial [Nicotiana attenua 0.970 0.611 0.637 0.0
>gi|224053392|ref|XP_002297796.1| predicted protein [Populus trichocarpa] gi|222845054|gb|EEE82601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/566 (67%), Positives = 445/566 (78%), Gaps = 20/566 (3%)

Query: 1   MLKPQVHQSHQSLKPLVPLSKPFLRGNFHA-FRALQSSSSIKNIPKIRIGISPSVNIKAI 59
           MLKPQ+HQSH S K    L KPF+ G+ HA F     S S K   K+R+G     +IK+I
Sbjct: 1   MLKPQLHQSHLSTKIPFLLPKPFIHGSGHASFPVYSRSLSTKANKKVRVGYKHG-SIKSI 59

Query: 60  TTFTQKSTQVKAFVTIKPSVG------GLVSGFVDDVKDMFGKSLLLELVSAELDPKTGA 113
            + TQ+ST VKA VT+K +V       G+  G +DD  D+FGK+LLLELVSAELDPKTG 
Sbjct: 60  ASVTQQSTDVKAVVTVKQTVVDFWTEIGIERG-LDDFTDLFGKTLLLELVSAELDPKTGL 118

Query: 114 EKPTIKGFAHR---AGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDG 170
           EKP+I+ +AH+    GED    I YE+ F VPP FGE+GAI VENEHHKEMYL+D+VLDG
Sbjct: 119 EKPSIRKYAHKIDHEGED----IKYEADFVVPPDFGEIGAIFVENEHHKEMYLHDVVLDG 174

Query: 171 PRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGER 230
              GPV++TC SW+ SK  NK+KR+FFTNKSYLPSQTP+G+ RLR EEL+ LRG+GQG+R
Sbjct: 175 FPTGPVHVTCDSWIHSKFDNKKKRLFFTNKSYLPSQTPSGIRRLREEELVLLRGNGQGQR 234

Query: 231 KTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLIN 290
           K  DRIYDYDVYND+G PD   ELARPVLGGKEHPYPRRCRTGRP CETDP+SE R    
Sbjct: 235 KAGDRIYDYDVYNDIGNPDKKPELARPVLGGKEHPYPRRCRTGRPRCETDPSSEKRVSAF 294

Query: 291 YVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVP 350
           YVPRDEAFSE+KQL FSAKTLYS+ H L+PS+   I D +LGFPY T ID LF+EG+ +P
Sbjct: 295 YVPRDEAFSEVKQLTFSAKTLYSLFHALIPSIGNVIDDANLGFPYMTAIDSLFSEGIEMP 354

Query: 351 MPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLN 410
                 ++  W+ ++PRL K I   G +VLRFE P+ M+RDKFFWF+DEEF RQTLAGLN
Sbjct: 355 ---PLTKEGFWKEVMPRLFKVIAGGG-DVLRFEVPKPMERDKFFWFKDEEFARQTLAGLN 410

Query: 411 PYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDL 470
           PYSI+ VTEWPL+S LDPEIYGPPESAIT EL+E EIGG+  V++AI++KKLFILDYHDL
Sbjct: 411 PYSIKSVTEWPLKSELDPEIYGPPESAITSELLEAEIGGVTRVDKAIREKKLFILDYHDL 470

Query: 471 LLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHST 530
           LLP+V KVRE+KGTTLYGSRT+FF  P GTLRPLAIELTRPPMDGKPQWKQVFTP +HST
Sbjct: 471 LLPFVSKVREIKGTTLYGSRTVFFLTPEGTLRPLAIELTRPPMDGKPQWKQVFTPCYHST 530

Query: 531 ECWLWRLAKAHVLAHDSGYHQLVSHW 556
            CWLWRLAKAHVLAHDSG+HQLVSHW
Sbjct: 531 GCWLWRLAKAHVLAHDSGFHQLVSHW 556

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|213876486|gb|ACJ54281.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|224103783|ref|XP_002334016.1| predicted protein [Populus trichocarpa] gi|222839571|gb|EEE77908.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|71999169|gb|AAZ57444.1| lipoxygenase LOX1 [Populus deltoides] Back     alignment and taxonomy information
>gi|229554825|gb|ACQ76787.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|308943877|gb|ADO51752.1| lipoxygenase [Camellia sinensis] Back     alignment and taxonomy information
>gi|71999171|gb|AAZ57445.1| lipoxygenase LOX2 [Populus deltoides] Back     alignment and taxonomy information
>gi|255544764|ref|XP_002513443.1| lipoxygenase, putative [Ricinus communis] gi|223547351|gb|EEF48846.1| lipoxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|312837045|dbj|BAJ34928.1| lipoxygenase [Vitis hybrid cultivar] Back     alignment and taxonomy information
>gi|32454712|gb|AAP83137.1| lipoxygenase, partial [Nicotiana attenuata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query567
UNIPROTKB|P38419 924 CM-LOX1 "Lipoxygenase 7, chlor 0.858 0.527 0.545 2.9e-142
TAIR|locus:2096915 896 LOX2 "lipoxygenase 2" [Arabido 0.843 0.533 0.513 5.4e-134
TAIR|locus:2030215 926 LOX4 "lipoxygenase 4" [Arabido 0.818 0.501 0.461 4.6e-112
TAIR|locus:2018848 919 LOX3 "lipoxygenase 3" [Arabido 0.851 0.525 0.451 1.6e-111
TAIR|locus:2008808 917 LOX6 "lipoxygenase 6" [Arabido 0.857 0.529 0.425 2e-102
TAIR|locus:2011030 859 LOX1 "lipoxygenase 1" [Arabido 0.814 0.537 0.412 2.3e-87
TAIR|locus:2087837 886 LOX5 [Arabidopsis thaliana (ta 0.728 0.466 0.408 6e-80
UNIPROTKB|P29250 870 LOX1.1 "Linoleate 9S-lipoxygen 0.813 0.529 0.386 4.2e-79
UNIPROTKB|H9L001 681 Gga.6903 "Uncharacterized prot 0.243 0.202 0.310 2.2e-06
ZFIN|ZDB-GENE-090311-47 674 alox5 "arachidonate 5-lipoxyge 0.250 0.210 0.273 1.5e-05
UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
 Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
 Identities = 275/504 (54%), Positives = 354/504 (70%)

Query:    66 STQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRA 125
             + +VKA  TIK +VG L++  +D ++D+ G+SL LELVS+ELD KTG EK T++ +AH  
Sbjct:    83 AVRVKAVATIKVTVGELINRSID-IRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNV 141

Query:   126 GEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL---DGPRNGPV-NITCG 181
              +D    + YE+ F+VP  FG +GAI+V NE  +EM+L DI L   DG  N  V  I C 
Sbjct:   142 DDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCN 201

Query:   182 SWVQSKHVNKQ----KRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIY 237
             SWVQ K V  +    KRIFF NK+YLP QTP GL   R  +L   RGDG GER+  DR+Y
Sbjct:   202 SWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVY 261

Query:   238 DYDVYNDLGVPDFCSELARPVLGG-KEHPYPRRCRTGRPPCETDPASESRTLINYVPRDE 296
             DYDVYNDLG PD   +LARPVLGG K+ PYPRRCRTGRPP + DP SE+R    YVPRDE
Sbjct:   262 DYDVYNDLGNPDSNGDLARPVLGGNKQFPYPRRCRTGRPPSKKDPKSETRKGNVYVPRDE 321

Query:   297 AFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDT---DLGFPYFTTIDKLFNEGVNVPMPE 353
              FS  K+  F  KT+ SVL   VP+ ++ ++D    +L FP F  IDKLF +GV +P  +
Sbjct:   322 EFSPEKEDYFLRKTVGSVLQAAVPAAQSLLLDKLKWNLPFPSFFVIDKLFEDGVELPGVD 381

Query:   354 TFKEKALWRTILPRLVKGIEDTGKE-VLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPY 412
                      +++PRL++ + DT  E +LRFETP  + +DKF W RDEEF R+TLAG+NPY
Sbjct:   382 KLN---FLESVVPRLLEHLRDTPAEKILRFETPANIQKDKFAWLRDEEFARETLAGINPY 438

Query:   413 SIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLL 472
             +I LV E+PL+S LDP +YGP ESAIT +L+E+++  +MTVEEAI QK+LF+LD+HDL L
Sbjct:   439 AIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFMLDFHDLFL 498

Query:   473 PYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTEC 532
             PYV K+R L  TT+YGSRT+FF    GTL+ LAIELTRP    +PQW+QVFTPS  +T  
Sbjct:   499 PYVHKIRSLDHTTMYGSRTVFFLTDDGTLQLLAIELTRPASPSQPQWRQVFTPSTDATMS 558

Query:   533 WLWRLAKAHVLAHDSGYHQLVSHW 556
             WLWR+AKAHV AHD+G+H+L++HW
Sbjct:   559 WLWRMAKAHVRAHDAGHHELITHW 582
GO:0009607 "response to biotic stimulus" evidence=ISS;IMP
GO:0009611 "response to wounding" evidence=ISS;IMP
GO:0016166 "phytoene dehydrogenase activity" evidence=ISS;IDA
GO:0051707 "response to other organism" evidence=ISS;IDA
TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|H9L001 Gga.6903 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090311-47 alox5 "arachidonate 5-lipoxygenase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.13.11LOW CONFIDENCE prediction!
3rd Layer1.13.11.120.824
3rd Layer4.1.20.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_I000375
hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (897 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP74A1
cytochrome P450 allene oxide synthase (EC-4.2.1.92) (526 aa)
     •• 0.902
gw1.XVIII.245.1
SubName- Full=Putative uncharacterized protein; (138 aa)
     •  0.899
gw1.XVI.1394.1
hypothetical protein (823 aa)
     •  0.899
gw1.40.286.1
phospholipase A1 (EC-3.1.1.32) (357 aa)
     •  0.899
fgenesh4_pg.C_LG_II001255
phospholipase A1 (EC-3.1.1.32) (367 aa)
     •  0.899
eugene3.00060391
hypothetical protein (856 aa)
     •  0.899
CYP74B7
cytochrome P450 fatty acid hydroperoxide lyase (492 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_VIII0936
SubName- Full=Putative uncharacterized protein; (642 aa)
     •  0.899
grail3.0064002701
SubName- Full=Putative uncharacterized protein; (382 aa)
      • 0.502

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
PLN02305 918 PLN02305, PLN02305, lipoxygenase 1e-169
PLN02264 919 PLN02264, PLN02264, lipoxygenase 1e-159
PLN02337 866 PLN02337, PLN02337, lipoxygenase 1e-149
pfam00305 667 pfam00305, Lipoxygenase, Lipoxygenase 1e-140
cd01751137 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox 1e-51
smart00308105 smart00308, LH2, Lipoxygenase homology 2 (beta bar 3e-15
pfam01477115 pfam01477, PLAT, PLAT/LH2 domain 3e-09
>gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase Back     alignment and domain information 
 Score =  502 bits (1294), Expect = e-169
 Identities = 242/526 (46%), Positives = 338/526 (64%), Gaps = 21/526 (3%)

Query: 42  NIPKIRIGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMF----GKS 97
           N       + PS   K           V+A +TI+  +   ++   +D  + F    G+ 
Sbjct: 62  NKSVDGSSLLPSSRSKY-----AGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQG 116

Query: 98  LLLELVSAELDPKTGAEKP---TIKGFAHRAGEDKDGHII-YESKFEVPPSFGEVGAILV 153
           +L++LVS E+DP TG+ K    +++G+  +     D HI+ Y + F VP  FG+ GA+LV
Sbjct: 117 ILIQLVSEEIDPVTGSGKSVESSVRGWLPKP--SNDPHIVEYAADFTVPFDFGKPGAVLV 174

Query: 154 ENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTR 213
            N H KE YL +IV+ G  +GP+     +W+ S+  N + RI F N++YLPSQTP G+  
Sbjct: 175 TNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKD 234

Query: 214 LRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTG 273
           LR E+LL+LRG+G+GERK HDRIYDY  YNDLG PD   +LARPVLGG+E PYPRRCRTG
Sbjct: 235 LRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTG 294

Query: 274 RPPCETDPASESRTLIN---YVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTD 330
           RPP + DP  ESR       YVPRDE F EIK+  FSA  L ++LH L+PS+  A+  +D
Sbjct: 295 RPPTKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSD 354

Query: 331 LGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDR 390
           + F  F+ IDKL+N+G+ +   E   +       L   +K +    + +L+++ P  + R
Sbjct: 355 IPFTCFSDIDKLYNDGILLKTEE--PKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKR 412

Query: 391 DKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGI 450
           D+F W RD EF RQ LAG+NP +I ++ E+P+ S LDP +YGPPESA+T+ELIE+E+ G 
Sbjct: 413 DRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIERELEG- 471

Query: 451 MTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTR 510
           MTVE+AI++K+LFILDYHD+LLP++EK+  L     Y SRT+FF   +G LRP+AIEL+ 
Sbjct: 472 MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSL 531

Query: 511 PPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHW 556
           PP    P  K V+T    +T  W+W+LAKAHV ++D+G HQLV+HW
Sbjct: 532 PPTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHW 577

Length = 918
>gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase Back     alignment and domain information
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase Back     alignment and domain information
>gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase Back     alignment and domain information
>gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 567
PLN02305 918 lipoxygenase 100.0
PLN02264 919 lipoxygenase 100.0
PLN02337 866 lipoxygenase 100.0
PF00305 667 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li 100.0
cd01751137 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re 100.0
smart00308105 LH2 Lipoxygenase homology 2 (beta barrel) domain. 99.25
PF01477113 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg 98.85
cd00113116 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin 98.58
cd02899109 PLAT_SR Scavenger receptor protein. A subfamily of 98.36
cd01753113 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u 98.07
cd01756120 PLAT_repeat PLAT/LH2 domain repeats of family of p 97.94
cd01752120 PLAT_polycystin PLAT/LH2 domain of polycystin-1 li 97.7
cd01757114 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter 97.69
cd01754129 PLAT_plant_stress PLAT/LH2 domain of plant-specifi 97.68
>PLN02305 lipoxygenase Back     alignment and domain information 
Probab=100.00  E-value=4.7e-159  Score=1327.93  Aligned_cols=496  Identities=46%  Similarity=0.844  Sum_probs=465.6

Q ss_pred             cceeeEEEEeecc-eeeeeeEeeecccCCcccccchhhhhhcCCcEEEEEEeeeeCCCCCCcc---ceeccccccCCCCC
Q 008395           54 VNIKAITTFTQKS-TQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEK---PTIKGFAHRAGEDK  129 (567)
Q Consensus        54 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~k---~~l~~w~~~~~~~~  129 (567)
                      .++||+|++|+|+ +|++++.+          +++|+++|++|++|+|||||++++++||+||   ++|++|+++ ....
T Consensus        82 ~~i~~~v~~~~~~~~~~~~~~~----------~~~d~~~~~~g~~v~lqLvS~~~~~~~g~gk~~~~~l~~~~~~-~~~~  150 (918)
T PLN02305         82 IDVRAVITIRKKIKEKITEKFE----------DQWEYFMNGIGQGILIQLVSEEIDPVTGSGKSVESSVRGWLPK-PSND  150 (918)
T ss_pred             CeEEEEEEEEeecccchhhccc----------chhhHHHHhhCCeEEEEEEeccccCCCCCcccccchhhccccC-CCCC
Confidence            5799999999998 89998777          8999999999999999999999999999665   899999987 3322


Q ss_pred             CCcEEEEEEEecCCCCCceEEEEEEecCCCceeeeeEEEccCCCCcEEEEeccceecCCCCccceEEeeccccccCCCCH
Q 008395          130 DGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPN  209 (567)
Q Consensus       130 ~~~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~~~i~FpCnsWV~~~~~~~~~rifF~nk~yLP~~tp~  209 (567)
                      +++++|+++|+|+++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+.+||||+||+|||++||+
T Consensus       151 ~~~~~~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~  230 (918)
T PLN02305        151 PHIVEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPP  230 (918)
T ss_pred             CCceEEEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCH
Confidence            66789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCccccCeEEeccccCCCCCCCCCCccccccCCCCCCCCCcccCCCCCCCCCCCCccccCC-
Q 008395          210 GLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASESRTL-  288 (567)
Q Consensus       210 ~L~~~Re~EL~~lRG~g~gerk~~dRiYdydvYnDlG~Pd~~~~l~RpvlGG~~~PYPRR~RTGR~~~~~dp~sesr~~-  288 (567)
                      +|++|||+||++|||||+||||+||||||||||||||+||++++++||||||++|||||||||||+|+++||.+|||.. 
T Consensus       231 ~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~  310 (918)
T PLN02305        231 GIKDLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEEWPYPRRCRTGRPPTKKDPLCESRIEK  310 (918)
T ss_pred             HHHHHHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCCCCCCCcCcCCCCCCCCCCcccccccC
Confidence            9999999999999999999999999999999999999999999999999999669999999999999999999999954 


Q ss_pred             --CCccCCCCCcChhhhcccccchhHHHHhhhhhhhhhhhccCCCCCCCHHHHHHHhccCCCCCCCchhhHHHHHhhh-h
Q 008395          289 --INYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTI-L  365 (567)
Q Consensus       289 --~~yvPrDE~Fs~~K~~dF~~~~lk~~~~~~ip~l~~~~~~~~~~f~sf~di~~Ly~~g~~l~~~~~~~~~~~~~~~-~  365 (567)
                        .+||||||+|+++|+++|+++++|+++|+++|+|+++++.+..+|++|+||++||++|++||.    .....++.+ +
T Consensus       311 ~~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~----~~~~~~~~~p~  386 (918)
T PLN02305        311 PHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKT----EEPKDIGLNPF  386 (918)
T ss_pred             CCCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCc----hhhhhhhcCCc
Confidence              479999999999999999999999999999999999998889999999999999999999995    211222223 3


Q ss_pred             --hhhhhcccccccccccccCccccccccccccccHHHHHhhhhCCCcccccccccCCCCCCCCCCccCCCCCcccHHHH
Q 008395          366 --PRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELI  443 (567)
Q Consensus       366 --~~i~~~~~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yG~~~s~it~e~i  443 (567)
                        ++++++ .++++.+||||+|+||++|+++|++|+|||||+|||+||++|++|++||++|+|||++||+|+|+||+|||
T Consensus       387 ~~~~~~~i-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~v  465 (918)
T PLN02305        387 LGNFMKQV-LSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELI  465 (918)
T ss_pred             hHHHHHHh-hhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHH
Confidence              345555 77889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCcccHHHHHhcCCEEEEcCCccccchhhhcccCCCceeeeeeeeEeecCCCceeeEEEEecCCCCCCCCCCCeEE
Q 008395          444 EKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVF  523 (567)
Q Consensus       444 e~~l~g~~tl~eal~~grLFilDy~d~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PIAIqL~~p~~~~~~~~~~Vf  523 (567)
                      +..|+| +||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+++++++++.+++||
T Consensus       466 e~~L~G-~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~Vf  544 (918)
T PLN02305        466 ERELEG-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVY  544 (918)
T ss_pred             HhhcCC-CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceee
Confidence            999998 9999999999999999999999999999999999999999999999999999999999999877666778999


Q ss_pred             eCCCCCCCChHHHHHHHHHHhccchhHHHHHHHhhcccccccC
Q 008395          524 TPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSIT  566 (567)
Q Consensus       524 tP~d~~~~~~~W~LAKa~v~~aD~~~HQlisH~lrTHLv~e~~  566 (567)
                      ||.+++++.|.|+||||||++||++|||+|+|||+||+++|+.
T Consensus       545 tP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~Epf  587 (918)
T PLN02305        545 THGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPY  587 (918)
T ss_pred             CCCCCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHH
Confidence            9987778899999999999999999999999999999999973

>PLN02264 lipoxygenase Back     alignment and domain information
>PLN02337 lipoxygenase Back     alignment and domain information
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 Back     alignment and domain information
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins Back     alignment and domain information
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain Back     alignment and domain information
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 Back     alignment and domain information
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain Back     alignment and domain information
>cd02899 PLAT_SR Scavenger receptor protein Back     alignment and domain information
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase Back     alignment and domain information
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function Back     alignment and domain information
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins Back     alignment and domain information
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family Back     alignment and domain information
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
2iuj_A 853 Crystal Structure Of Soybean Lipoxygenase-B Length 3e-96
1ik3_A 857 Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope 2e-93
1rov_A 857 Lipoxygenase-3 Treated With Cumene Hydroperoxide Le 3e-92
2iuk_A 864 Crystal Structure Of Soybean Lipoxygenase-D Length 1e-88
2sbl_B 839 The Three-Dimensional Structure Of An Arachidonic A 4e-88
3bne_A 839 Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 4e-88
1fgt_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng 5e-88
3bnb_A 839 Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 5e-88
1fgr_A 839 Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng 5e-88
3bnd_A 839 Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 5e-88
1fgm_A 839 Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng 5e-88
3pzw_A 839 Soybean Lipoxygenase-1 - Re-Refinement Length = 839 5e-88
3bnc_A 839 Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 5e-88
1y4k_A 839 Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng 6e-88
1fgq_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng 1e-87
1fgo_A 839 Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng 2e-87
3v98_A 691 S663d Stable-5-Lox Length = 691 2e-08
3v92_B 691 S663a Stable-5-Lox Length = 691 2e-08
3o8y_A 691 Stable-5-Lipoxygenase Length = 691 2e-08
3vf1_A 698 Structure Of A Calcium-Dependent 11r-Lipoxygenase S 6e-08
3fg4_A 696 Crystal Structure Of Delta413-417:gs I805a Lox Leng 3e-04
3fg1_A 696 Crystal Structure Of Delta413-417:gs Lox Length = 6 3e-04
3dy5_A 1066 Allene Oxide Synthase 8r-Lipoxygenase From Plexaura 3e-04
2fnq_A 699 Insights From The X-Ray Crystal Structure Of Coral 3e-04
3fg3_A 696 Crystal Structure Of Delta413-417:gs I805w Lox Leng 3e-04
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 Back     alignment and structure 
Iteration: 1

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 191/427 (44%), Positives = 255/427 (59%), Gaps = 12/427 (2%)
Query: 135 YESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-DGPRNGPVNITCGSWVQSKHVNKQK 193
           Y+++F+    FG  GA  ++N    E YL  ++L D P +G ++  C SWV +    K  
Sbjct: 95  YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 194 RIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSE 253
           RIFF N +YLPS+TP  L + R EEL N+RGDG GERK  DRIYDYDVYNDLG PD   +
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEK 214
Query: 254 LARPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYS 313
            ARPVLGG   PYPRR RTGR     DP SE      Y+PRDEAF  +K   F A  + S
Sbjct: 215 YARPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKS 274
Query: 314 VLHGLVPSLETAIIDT--DLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKG 371
           V   ++P L  A       L F  F  + KL+  GV   +P  F       T +P + + 
Sbjct: 275 VAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVT--LPTNFLSNI---TPIPIIKEL 329
Query: 372 IEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIY 431
               G++ L++  P+ M  DK  W  DEEF R+T+AGLNP  I+++ E+PL S LD + Y
Sbjct: 330 FRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAY 389
Query: 432 GPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRT 491
           G     ITKE +E  +GG +TVE+AI+ KKLFILD+HD L+PY+ K+     T  Y +RT
Sbjct: 390 GDHTCIITKEHLEPNLGG-LTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRT 447
Query: 492 LFFSYPSGTLRPLAIELTRPPMDGKPQW--KQVFTPSWHSTECWLWRLAKAHVLAHDSGY 549
           +FF    GTL PLAIEL++P   G+      +V+ PS    E ++W LAKA+V+ +D+ Y
Sbjct: 448 IFFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACY 507
Query: 550 HQLVSHW 556
           HQ++SHW
Sbjct: 508 HQIISHW 514
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 Back     alignment and structure
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 Back     alignment and structure
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 Back     alignment and structure
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 Back     alignment and structure
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 Back     alignment and structure
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 Back     alignment and structure
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 Back     alignment and structure
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 Back     alignment and structure
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 Back     alignment and structure
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 Back     alignment and structure
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 Back     alignment and structure
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 Back     alignment and structure
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 Back     alignment and structure
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 Back     alignment and structure
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 Back     alignment and structure
>pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 Back     alignment and structure
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 Back     alignment and structure
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 Back     alignment and structure
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 Back     alignment and structure
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 Back     alignment and structure
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 Back     alignment and structure
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 Back     alignment and structure
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 0.0
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 1e-177
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 1e-167
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 2e-50
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 1e-49
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 5e-48
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 2e-46
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 7e-45
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 4e-40
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 7e-38
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 Back     alignment and structure
 Score =  536 bits (1381), Expect = 0.0
 Identities = 185/505 (36%), Positives = 264/505 (52%), Gaps = 21/505 (4%)

Query: 65  KSTQVKAFVTIKPSVGG---LVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGF 121
              ++K  V + P            VD++    G+S+ L+L+SA      G  K     F
Sbjct: 4   AGHKIKGTVVLMPKNELEVNPDGSAVDNLNAFLGRSVSLQLISATKADAHGKGKVGKDTF 63

Query: 122 AHR----AGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDG-PRNGPV 176
                        G   +   FE   S G  GA  ++N    E +L  + L+     G +
Sbjct: 64  LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTI 123

Query: 177 NITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRI 236
              C SWV +  + K  RIFF N +Y+PS+TP  L   R EEL +LRG+G GERK +DRI
Sbjct: 124 RFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRI 183

Query: 237 YDYDVYNDLGVPDFCSELARPVLGG-KEHPYPRRCRTGRPPCETDPASESRTLINYVPRD 295
           YDYDVYNDLG PD   +LARPVLGG    PYPRR RTGR P  TDP +E +  + YVPRD
Sbjct: 184 YDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRD 243

Query: 296 EAFSEIKQLQFSAKTLYSVLHGLVPSLETAI--IDTDLGFPYFTTIDKLFNEGVNVPMPE 353
           E    +K          S+   + P+ E+A     T + F  F  +  L+  G+ +P   
Sbjct: 244 ENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP--- 300

Query: 354 TFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYS 413
             ++       LP + +     G+ +L+F  P  +   +  W  DEEF R+ +AG+NP  
Sbjct: 301 --RDVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCV 358

Query: 414 IRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLP 473
           IR + E+P +S LDP IYG   S IT + ++ +     T++EA+  ++LF+LDYHD+ +P
Sbjct: 359 IRGLEEFPPKSNLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMP 415

Query: 474 YVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDG--KPQWKQVFTPSWHSTE 531
           YV ++ +L     Y +RT+ F    GTL+P+AIEL+ P   G       QV  P+    E
Sbjct: 416 YVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVE 475

Query: 532 CWLWRLAKAHVLAHDSGYHQLVSHW 556
             +W LAKA+V+ +DS YHQL+SHW
Sbjct: 476 STIWLLAKAYVIVNDSCYHQLMSHW 500
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query567
2iuk_A 864 SEED lipoxygenase; iron, dioxygenase, metal-bindin 100.0
1f8n_A 839 Lipoxygenase-1; dioxygenase, metalloprotein, fatty 100.0
2iuj_A 853 Lipoxygenase L-5; dioxygenase, metal-binding, oxid 100.0
1lox_A 662 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot 100.0
3v98_A 691 Arachidonate 5-lipoxygenase; dioxygenase, oxidored 100.0
3fg1_A 696 Allene oxide synthase-lipoxygenase protein; arichi 100.0
3vf1_A 698 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik 100.0
3dy5_A 1066 Allene oxide synthase-lipoxygenase protein; fusion 100.0
3rde_A 573 Arachidonate 12-lipoxygenase, 12S-type; C-terminal 100.0
3d3l_A 541 Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir 100.0
2wxu_A370 Phospholipase C; cytolysis, hydrolase, hemolysis, 98.07
1olp_A370 Alpha-toxin; zinc phospholipase C, GAS gangrene de 98.02
3cwz_B384 RAB6IP1, RAB6-interacting protein 1; RAB small GTP 96.27
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Back     alignment and structure
Probab=100.00  E-value=1.7e-151  Score=1276.27  Aligned_cols=501  Identities=40%  Similarity=0.664  Sum_probs=461.5

Q ss_pred             cceeeEEEEeecc-eeeeeeEeeeccc------------CCcccccchhhhhhcCCcEEEEEEeeeeCCCCCCcc----c
Q 008395           54 VNIKAITTFTQKS-TQVKAFVTIKPSV------------GGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEK----P  116 (567)
Q Consensus        54 ~~~~~~~~~~~~~-~~~~~~~~~~~~~------------~~~~~~~~d~~~~~~g~~v~lqLvS~~~~~~~g~~k----~  116 (567)
                      .++||+|++|+|+ +|++++.+++...            .+-+.+++|+++|++|++|+|||||+++||+||+||    +
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqlvs~~~~~~~~~~k~~~~~   88 (864)
T 2iuk_A            9 QKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNISMQLISATQTDGSGNGKVGKEV   88 (864)
T ss_dssp             CCEEEEEEEEEGGGSCHHHHTTC-----------------------CCSGGGSCSTTEEEEEEEEEEECSSSCEEEEEEE
T ss_pred             CEEEEEEEEEecccccccccccccccccccccccccccccccccchhhhHHHhccCeEEEEEEecccCCCCCCCcCCCcc
Confidence            5799999999998 8888766332211            112248889999999999999999999999999885    9


Q ss_pred             eeccccccCCCCCCCcEEEEEEEecCCCCCceEEEEEEecCCCceeeeeEEEccCCC-CcEEEEeccceecCCCCccceE
Q 008395          117 TIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN-GPVNITCGSWVQSKHVNKQKRI  195 (567)
Q Consensus       117 ~l~~w~~~~~~~~~~~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~l~~~p~-~~i~FpCnsWV~~~~~~~~~ri  195 (567)
                      +|++|+.+....++++++|+++|.||++||+||||+|+|+|++||||++|+|+++|+ |++||+||||||+.++|+.+||
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~Ri  168 (864)
T 2iuk_A           89 YLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRI  168 (864)
T ss_dssp             ECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSCEE
T ss_pred             cccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCceEEEEEEEecCCCCCcEEEecCccccCCCCCCCCce
Confidence            999999554446788999999999999999999999999999999999999999996 8999999999999999999999


Q ss_pred             EeeccccccCCCCHHHHHHHHHHHHhhcCCCCCCccccCeEEeccccCCCCCCCCCCccccccCCC-CCCCCCcccCCCC
Q 008395          196 FFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGG-KEHPYPRRCRTGR  274 (567)
Q Consensus       196 fF~nk~yLP~~tp~~L~~~Re~EL~~lRG~g~gerk~~dRiYdydvYnDlG~Pd~~~~l~RpvlGG-~~~PYPRR~RTGR  274 (567)
                      ||+||+|||++||++|+++||+||++|||||+||||+||||||||||||||+||++++  |||||| ++|||||||||||
T Consensus       169 fF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~~pyPrR~rtgr  246 (864)
T 2iuk_A          169 FFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRTGR  246 (864)
T ss_dssp             EEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECCCC
T ss_pred             eccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhhhhhhcCCCcccCCC--CcccCCCCCCCCCccccCCC
Confidence            9999999999999999999999999999999999999999999999999999999987  999999 9999999999999


Q ss_pred             CCCCCCCCccccCCCCccCCCCCcChhhhcccccchhHHHHhhhhhhhhhhhc--c-CCCCCCCHHHHHHHhccCCCCCC
Q 008395          275 PPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAII--D-TDLGFPYFTTIDKLFNEGVNVPM  351 (567)
Q Consensus       275 ~~~~~dp~sesr~~~~yvPrDE~Fs~~K~~dF~~~~lk~~~~~~ip~l~~~~~--~-~~~~f~sf~di~~Ly~~g~~l~~  351 (567)
                      +|+++||.+|+|.+ +||||||+|+++|+++|.++++++++|.++|+|++++.  + +..+|+||+||++||++|++||.
T Consensus       247 ~~~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~l~~  325 (864)
T 2iuk_A          247 ERTRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPT  325 (864)
T ss_dssp             CBCSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEECCH
T ss_pred             CCCCCCCCcccccc-CCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhccccCch
Confidence            99999999999975 99999999999999999999999999999999999885  3 67899999999999999999984


Q ss_pred             CchhhHHHHHhhh--hhhhhhcccccccccccccCccccccccccccccHHHHHhhhhCCCcccccccccCCCCCCCCCC
Q 008395          352 PETFKEKALWRTI--LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPE  429 (567)
Q Consensus       352 ~~~~~~~~~~~~~--~~~i~~~~~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~  429 (567)
                             ..++.+  ++.+++++++++++++|||+|+||++|+++|++|+|||||+|||+||++|++|++||++|+|||+
T Consensus       326 -------~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~  398 (864)
T 2iuk_A          326 -------DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPT  398 (864)
T ss_dssp             -------HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSCHH
T ss_pred             -------hhhcccCcHHHHHHHhhccccchhcCCCcceecccchhhhchHHHHHHHhcCCCchhhhhhhccCCcccCChh
Confidence                   233443  45778887888999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcccHHHHHHhhCCcccHHHHHhcCCEEEEcCCccccchhhhcccCCCceeeeeeeeEeecCCCceeeEEEEec
Q 008395          430 IYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELT  509 (567)
Q Consensus       430 ~yG~~~s~it~e~ie~~l~g~~tl~eal~~grLFilDy~d~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PIAIqL~  509 (567)
                      +||+++|+||++||+..|+| +||+|||++|||||+||||++|||+.++|.++++++|||+||||++++|+|+||||||+
T Consensus       399 ~yg~~~s~it~e~i~~~l~g-~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIqLs  477 (864)
T 2iuk_A          399 LYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELS  477 (864)
T ss_dssp             HHCCCCCCCCHHHHGGGTTT-CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEE
T ss_pred             hcCCcccccCHHHHhhccCC-CcHHHHHhcCCEEEecchhhhccchhhcccCCCceeecceEEEEEcCCCCEeEEEEEee
Confidence            99999999999999999998 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC--CCCCeEEeCCCCCCCChHHHHHHHHHHhccchhHHHHHHHhhccccccc
Q 008395          510 RPPMDGK--PQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSI  565 (567)
Q Consensus       510 ~p~~~~~--~~~~~VftP~d~~~~~~~W~LAKa~v~~aD~~~HQlisH~lrTHLv~e~  565 (567)
                      +|+++++  +++++||||+|+++++|.|+||||||++||++|||+|+||++||+++|+
T Consensus       478 ~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Ep  535 (864)
T 2iuk_A          478 KPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEP  535 (864)
T ss_dssp             ECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHH
T ss_pred             CCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Confidence            9876544  3679999999877778999999999999999999999999999999996
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Back     alignment and structure
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Back     alignment and structure
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Back     alignment and structure
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Back     alignment and structure
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Back     alignment and structure
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Back     alignment and structure
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Back     alignment and structure
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Back     alignment and structure
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Back     alignment and structure
>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A Back     alignment and structure
>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 Back     alignment and structure
>3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 567
d3bnea1 690 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom 1e-162
d2p0ma1 551 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory 9e-50
d3bnea2143 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl 2e-41
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 Back     information, alignment and structure

class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

 Score =  475 bits (1225), Expect = e-162
 Identities = 148/359 (41%), Positives = 206/359 (57%), Gaps = 13/359 (3%)

Query: 203 LPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGG- 261
           +PS+TP  L   R EEL +LRG+G GERK +DRIYDYDVYNDLG PD   +LARPVLGG 
Sbjct: 1   VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60

Query: 262 KEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPS 321
              PYPRR RTGR P  TDP +E +  + YVPRDE    +K          S+   + P+
Sbjct: 61  STFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPA 120

Query: 322 LETAII--DTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKEV 379
            E+A     T + F  F  +  L+  G+ +P              LP + +     G+ +
Sbjct: 121 FESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIP-----LPVIKELYRTDGQHI 175

Query: 380 LRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAIT 439
           L+F  P  +   +  W  DEEF R+ +AG+NP  IR + E+P +S LDP IYG   S IT
Sbjct: 176 LKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKIT 235

Query: 440 KELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSG 499
            + ++ +     T++EA+  ++LF+LDYHD+ +PYV ++ +L     Y +RT+ F    G
Sbjct: 236 ADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDG 292

Query: 500 TLRPLAIELTRPPMDG--KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHW 556
           TL+P+AIEL+ P   G       QV  P+    E  +W LAKA+V+ +DS YHQL+SHW
Sbjct: 293 TLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHW 351
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query567
d3bnea1 690 Lipoxigenase, C-terminal domain {Soybean (Glycine 100.0
d2p0ma1 551 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 100.0
d3bnea2143 Plant lipoxigenase {Soybean (Glycine max), isozyme 100.0
d2p0ma2111 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T 97.74
d1olpa2121 Alpha-toxin, C-terminal domain {Clostridium absonu 97.48
d1ca1a2121 Alpha-toxin, C-terminal domain {Clostridium perfri 97.0
d1rp1a1113 Pancreatic lipase, C-terminal domain {Dog (Canis f 92.84
d1bu8a1114 Pancreatic lipase, C-terminal domain {Rat (Rattus 92.05
d1gpla1112 Pancreatic lipase, C-terminal domain {Guinea pig ( 83.52
>d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Lipoxigenase
superfamily: Lipoxigenase
family: Plant lipoxigenases
domain: Lipoxigenase, C-terminal domain
species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]

Probab=100.00  E-value=5.8e-115  Score=965.12  Aligned_cols=354  Identities=42%  Similarity=0.750  Sum_probs=336.4

Q ss_pred             ccCCCCHHHHHHHHHHHHhhcCCCCCCccccCeEEeccccCCCCCCCCCCccccccCCC-CCCCCCcccCCCCCCCCCCC
Q 008395          203 LPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGG-KEHPYPRRCRTGRPPCETDP  281 (567)
Q Consensus       203 LP~~tp~~L~~~Re~EL~~lRG~g~gerk~~dRiYdydvYnDlG~Pd~~~~l~RpvlGG-~~~PYPRR~RTGR~~~~~dp  281 (567)
                      ||++||++|++|||+||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+||++||
T Consensus         1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp   80 (690)
T d3bnea1           1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP   80 (690)
T ss_dssp             CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred             CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999 78999999999999999999


Q ss_pred             CccccCCCCccCCCCCcChhhhcccccchhHHHHhhhhhhhhhhhc--cCCCCCCCHHHHHHHhccCCCCCCCchhhHHH
Q 008395          282 ASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAII--DTDLGFPYFTTIDKLFNEGVNVPMPETFKEKA  359 (567)
Q Consensus       282 ~sesr~~~~yvPrDE~Fs~~K~~dF~~~~lk~~~~~~ip~l~~~~~--~~~~~f~sf~di~~Ly~~g~~l~~~~~~~~~~  359 (567)
                      .+|+|...+||||||+|+++|++||.++++|+++|+++|.|+++++  ++..+|+||+||++||++|+++|.    .  .
T Consensus        81 ~~e~r~~~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~----~--~  154 (690)
T d3bnea1          81 NTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPR----D--V  154 (690)
T ss_dssp             TSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCH----H--H
T ss_pred             CcccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCch----h--h
Confidence            9999999999999999999999999999999999999999999875  467899999999999999999985    2  3


Q ss_pred             HHhhh-hhhhhhcccccccccccccCccccccccccccccHHHHHhhhhCCCcccccccccCCCCCCCCCCccCCCCCcc
Q 008395          360 LWRTI-LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAI  438 (567)
Q Consensus       360 ~~~~~-~~~i~~~~~~~~~~~lkfp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yG~~~s~i  438 (567)
                      +.+.+ ++.++++++++++.++|||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+||+++||++.|+|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~s~i  234 (690)
T d3bnea1         155 ISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKI  234 (690)
T ss_dssp             HHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCCCCC
T ss_pred             hhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchhhhh
Confidence            33333 67899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHhhCCcccHHHHHhcCCEEEEcCCccccchhhhcccCCCceeeeeeeeEeecCCCceeeEEEEecCCCCCCC--
Q 008395          439 TKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGK--  516 (567)
Q Consensus       439 t~e~ie~~l~g~~tl~eal~~grLFilDy~d~~lp~l~~in~~~g~~~YAprtLffl~~dG~L~PIAIqL~~p~~~~~--  516 (567)
                      |+++++  ++| +||++||++|||||+||||+++|++.++|..++++.|||+||||++++|+|+||||||+++++.++  
T Consensus       235 t~~~i~--l~G-~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~~~  311 (690)
T d3bnea1         235 TADSLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGDLS  311 (690)
T ss_dssp             CGGGCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTCCC
T ss_pred             hHhhhc--cCc-cHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcccC
Confidence            999985  778 999999999999999999999999999999999999999999999999999999999999986553  


Q ss_pred             CCCCeEEeCCCCCCCChHHHHHHHHHHhccchhHHHHHHHhhccccccc
Q 008395          517 PQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWYTYSFYSSI  565 (567)
Q Consensus       517 ~~~~~VftP~d~~~~~~~W~LAKa~v~~aD~~~HQlisH~lrTHLv~e~  565 (567)
                      +++++||||+|+++++|.|+||||||++||++|||+|+||++||+++|+
T Consensus       312 ~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Ep  360 (690)
T d3bnea1         312 AAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEP  360 (690)
T ss_dssp             CCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHH
T ss_pred             CCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHH
Confidence            6789999999977678999999999999999999999999999999996
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Back     information, alignment and structure
>d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} Back     information, alignment and structure
>d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Back     information, alignment and structure
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]} Back     information, alignment and structure