Your job contains 1 sequence.
>008397
MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF
YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI
RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPL
KRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVEL
KLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLH
AYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRH
CSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLM
LALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQ
YTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSGEGLQCYKKR
KPLKNPVDIERYPNDAGMAIHPREVIV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008397
(567 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122388 - symbol:MLH1 "AT4G09140" species:3702... 2126 3.8e-220 1
UNIPROTKB|Q5JN46 - symbol:P0401G10.10 "Os01g0958900 prote... 1839 9.8e-190 1
UNIPROTKB|E1BQE0 - symbol:MLH1 "Uncharacterized protein" ... 681 2.4e-108 2
MGI|MGI:101938 - symbol:Mlh1 "mutL homolog 1 (E. coli)" s... 662 3.5e-107 2
UNIPROTKB|P40692 - symbol:MLH1 "DNA mismatch repair prote... 672 2.2e-105 2
UNIPROTKB|E2RBM6 - symbol:MLH1 "Uncharacterized protein" ... 655 4.0e-104 2
UNIPROTKB|F1MPG0 - symbol:MLH1 "Uncharacterized protein" ... 652 4.6e-103 2
UNIPROTKB|E9PCU2 - symbol:MLH1 "DNA mismatch repair prote... 649 5.8e-103 2
RGD|620937 - symbol:Mlh1 "mutL homolog 1, colon cancer, n... 655 1.1e-101 2
UNIPROTKB|P97679 - symbol:Mlh1 "DNA mismatch repair prote... 655 1.1e-101 2
UNIPROTKB|A8HM54 - symbol:MLH1 "Mismatch repair protein" ... 629 1.1e-94 2
UNIPROTKB|H0Y818 - symbol:MLH1 "DNA mismatch repair prote... 672 8.9e-92 2
FB|FBgn0011659 - symbol:Mlh1 "Mlh1" species:7227 "Drosoph... 859 6.9e-86 1
ASPGD|ASPL0000056766 - symbol:AN0126 species:162425 "Emer... 804 4.7e-80 1
UNIPROTKB|Q5BH54 - symbol:AN0126.2 "DNA mismatch repair p... 804 4.7e-80 1
SGD|S000004777 - symbol:MLH1 "Protein required for mismat... 559 2.0e-77 2
UNIPROTKB|B7Z821 - symbol:MLH1 "cDNA FLJ55289, highly sim... 391 1.1e-69 2
CGD|CAL0005779 - symbol:MLH1 species:5476 "Candida albica... 528 1.8e-68 2
ZFIN|ZDB-GENE-040426-1600 - symbol:mlh1 "mutL homolog 1, ... 686 1.5e-67 1
POMBASE|SPBC1703.04 - symbol:mlh1 "MutL family protein Ml... 638 1.8e-62 1
UNIPROTKB|I3LT92 - symbol:MLH1 "Uncharacterized protein" ... 614 6.4e-60 1
UNIPROTKB|Q7SA79 - symbol:NCU08309 "Putative uncharacteri... 565 9.9e-55 1
UNIPROTKB|Q755L3 - symbol:AFL199C "AFL199Cp" species:2848... 564 1.3e-54 1
DICTYBASE|DDB_G0287393 - symbol:mlh1 "MutL DNA mismatch r... 365 1.7e-51 2
UNIPROTKB|Q7RE54 - symbol:PY05214 "HMLH1 gene product-rel... 235 4.1e-51 3
GENEDB_PFALCIPARUM|PF11_0184 - symbol:PF11_0184 "DNA mism... 233 7.4e-47 3
UNIPROTKB|Q8IIJ0 - symbol:PF11_0184 "DNA mismatch repair ... 233 7.4e-47 3
WB|WBGene00003373 - symbol:mlh-1 species:6239 "Caenorhabd... 269 8.5e-34 2
UNIPROTKB|Q9XU10 - symbol:mlh-1 "Protein MLH-1" species:6... 269 8.5e-34 2
UNIPROTKB|Q1RMN2 - symbol:MLH1 "Uncharacterized protein" ... 358 2.1e-32 1
UNIPROTKB|E7EUC9 - symbol:MLH1 "DNA mismatch repair prote... 294 2.6e-25 1
UNIPROTKB|P49850 - symbol:mutL "DNA mismatch repair prote... 307 2.0e-24 1
UNIPROTKB|Q74BP0 - symbol:mutL "DNA mismatch repair prote... 285 5.5e-22 1
TIGR_CMR|GSU_2001 - symbol:GSU_2001 "DNA mismatch repair ... 285 5.5e-22 1
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 285 5.6e-22 2
TIGR_CMR|CBU_1083 - symbol:CBU_1083 "DNA mismatch repair ... 268 3.8e-20 1
TIGR_CMR|BA_3904 - symbol:BA_3904 "DNA mismatch repair pr... 268 4.7e-20 1
UNIPROTKB|Q8A120 - symbol:mutL "DNA mismatch repair prote... 260 3.8e-19 1
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 253 3.5e-18 1
TIGR_CMR|DET_1195 - symbol:DET_1195 "DNA mismatch repair ... 250 3.7e-18 1
TIGR_CMR|SO_0601 - symbol:SO_0601 "DNA mismatch repair pr... 249 6.1e-18 1
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 244 1.8e-17 1
UNIPROTKB|Q8F6X4 - symbol:mutL "DNA mismatch repair prote... 238 8.8e-17 1
UNIPROTKB|C9JZ54 - symbol:MLH1 "DNA mismatch repair prote... 213 1.7e-16 1
UNIPROTKB|Q48P04 - symbol:mutL "DNA mismatch repair prote... 235 2.3e-16 1
UNIPROTKB|Q89DE6 - symbol:mutL "DNA mismatch repair prote... 233 3.3e-16 1
TIGR_CMR|CPS_0323 - symbol:CPS_0323 "DNA mismatch repair ... 232 4.9e-16 1
TIGR_CMR|VC_0345 - symbol:VC_0345 "DNA mismatch repair pr... 229 1.0e-15 1
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 230 1.5e-15 1
UNIPROTKB|P23367 - symbol:mutL species:83333 "Escherichia... 216 2.5e-14 1
UNIPROTKB|A6VD59 - symbol:mutL "DNA mismatch repair prote... 215 3.4e-14 1
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 161 3.9e-14 2
TIGR_CMR|NSE_0609 - symbol:NSE_0609 "DNA mismatch repair ... 214 4.6e-14 1
TIGR_CMR|ECH_0884 - symbol:ECH_0884 "DNA mismatch repair ... 205 7.4e-14 2
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 213 1.0e-13 1
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 213 1.6e-13 1
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 213 1.6e-13 1
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 213 1.6e-13 1
UNIPROTKB|Q9RTR0 - symbol:mutL "DNA mismatch repair prote... 209 2.2e-13 2
UNIPROTKB|P74925 - symbol:mutL "DNA mismatch repair prote... 206 2.2e-13 1
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 207 2.5e-13 1
UNIPROTKB|Q3KLC2 - symbol:mutL "DNA mismatch repair prote... 200 1.3e-12 1
UNIPROTKB|H0Y793 - symbol:MLH1 "DNA mismatch repair prote... 176 1.6e-12 1
TIGR_CMR|APH_0939 - symbol:APH_0939 "DNA mismatch repair ... 204 1.7e-12 2
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 129 3.5e-12 2
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 194 1.4e-11 2
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 206 1.8e-11 3
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 206 1.8e-11 3
TIGR_CMR|SPO_3362 - symbol:SPO_3362 "DNA mismatch repair ... 183 1.1e-10 1
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 128 1.1e-10 2
ZFIN|ZDB-GENE-030616-528 - symbol:pms1 "PMS1 postmeiotic ... 180 3.9e-10 1
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 152 6.0e-10 2
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 169 1.3e-09 2
UNIPROTKB|F1SN54 - symbol:PMS1 "Uncharacterized protein" ... 173 2.3e-09 1
UNIPROTKB|E2RAQ2 - symbol:PMS1 "Uncharacterized protein" ... 172 3.0e-09 1
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 145 4.3e-09 3
UNIPROTKB|P54277 - symbol:PMS1 "PMS1 protein homolog 1" s... 161 7.4e-09 2
UNIPROTKB|D4A651 - symbol:D4A651 "Uncharacterized protein... 167 1.0e-08 1
RGD|1359511 - symbol:Pms1 "postmeiotic segregation increa... 167 1.0e-08 1
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 114 1.1e-08 3
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 114 1.1e-08 3
UNIPROTKB|F1MW63 - symbol:PMS1 "Uncharacterized protein" ... 164 2.3e-08 1
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 121 2.4e-08 2
UNIPROTKB|Q7NL47 - symbol:mutL "DNA mismatch repair prote... 159 1.8e-07 2
ZFIN|ZDB-GENE-060810-45 - symbol:mlh3 "mutL homolog 3 (E.... 152 6.0e-07 1
UNIPROTKB|G3V419 - symbol:MLH3 "DNA mismatch repair prote... 150 1.1e-06 1
UNIPROTKB|Q9UHC1 - symbol:MLH3 "DNA mismatch repair prote... 150 1.3e-06 1
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 144 3.2e-06 1
UNIPROTKB|H0Y5L7 - symbol:MLH1 "DNA mismatch repair prote... 116 4.6e-06 1
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 141 6.4e-06 1
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 141 6.7e-06 1
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 141 6.7e-06 1
RGD|1309227 - symbol:Mlh3 "mutL homolog 3 (E. coli)" spec... 143 7.2e-06 1
UNIPROTKB|F1P0J4 - symbol:PMS1 "Uncharacterized protein" ... 145 2.1e-05 2
UNIPROTKB|E1BNK2 - symbol:MLH3 "Uncharacterized protein" ... 140 2.5e-05 2
UNIPROTKB|E2QZJ2 - symbol:MLH3 "Uncharacterized protein" ... 145 2.9e-05 2
UNIPROTKB|F1S2R6 - symbol:MLH3 "Uncharacterized protein" ... 140 4.8e-05 2
UNIPROTKB|E9PC65 - symbol:PMS1 "PMS1 protein homolog 1" s... 122 5.8e-05 2
UNIPROTKB|E1BA65 - symbol:PMS2 "Uncharacterized protein" ... 135 7.0e-05 2
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 129 0.00013 1
WARNING: Descriptions of 5 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2122388 [details] [associations]
symbol:MLH1 "AT4G09140" species:3702 "Arabidopsis
thaliana" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0006312 "mitotic recombination" evidence=RCA;IMP] [GO:0009555
"pollen development" evidence=RCA;IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 Pfam:PF02518
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687
GO:GO:0009555 GO:GO:0016887 GO:GO:0048316 GO:GO:0009845
GO:GO:0006298 GO:GO:0000790 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006312 EMBL:AL161514
GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712
GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
HSSP:P54278 ProtClustDB:CLSN2690816 EMBL:AJ012747 IPI:IPI00541714
PIR:F85092 PIR:T51620 RefSeq:NP_567345.2 UniGene:At.671
ProteinModelPortal:Q9ZRV4 SMR:Q9ZRV4 IntAct:Q9ZRV4 STRING:Q9ZRV4
PRIDE:Q9ZRV4 EnsemblPlants:AT4G09140.1 GeneID:826493
KEGG:ath:AT4G09140 TAIR:At4g09140 InParanoid:Q9ZRV4
PhylomeDB:Q9ZRV4 Genevestigator:Q9ZRV4 Uniprot:Q9ZRV4
Length = 737
Score = 2126 (753.4 bits), Expect = 3.8e-220, P = 3.8e-220
Identities = 407/542 (75%), Positives = 470/542 (86%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
MGFRGEALASMTYV HVTVTTITKG +HGYRVSYRDGVME EPKACAAVKGTQIMVENLF
Sbjct: 118 MGFRGEALASMTYVAHVTVTTITKGQIHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLF 177
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
YNMIARRKTLQNS+DDY KIVDLLSRMAIH+ NVSFSCRKHGA +ADVHS+ + SRLDSI
Sbjct: 178 YNMIARRKTLQNSADDYGKIVDLLSRMAIHYNNVSFSCRKHGAVKADVHSVVSPSRLDSI 237
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPL 180
R+VYGVSVA NL+++E S DSS F M+G++SNSNYVAKKT +VLF+NDRLVEC+ L
Sbjct: 238 RSVYGVSVAKNLMKVEVSSC-DSSGCTFDMEGFISNSNYVAKKTILVLFINDRLVECSAL 296
Query: 181 KRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVEL 240
KRA+EIVYAAT PKASKPF+YMSI LP EHVD+N+HPTK+EVSLLNQE+I+E IQS VE+
Sbjct: 297 KRAIEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEV 356
Query: 241 KLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLN--PSGSKLQKVPVNKMVRTDSSDPAGR 298
KLR +ND+RT++EQ VE S+ + D ++ PSG K QKVPVNKMVRTDSSDPAGR
Sbjct: 357 KLRNANDTRTFQEQKVEYIQSTLTSQKSDSPVSQKPSGQKTQKVPVNKMVRTDSSDPAGR 416
Query: 299 LHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIV 358
LHA++Q KP + +LS VRSSVRQRRN ETADL+S+QELI VD CH G+L+ V
Sbjct: 417 LHAFLQPKPQSLPDKVSSLSVVRSSVRQRRNPKETADLSSVQELIAGVDSCCHPGMLETV 476
Query: 359 RHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSEL 418
R+C+++GMADDV+AL+Q+NTH+YLANVV+LSKELMYQ LRRFAHFNAIQLSDPAPLSEL
Sbjct: 477 RNCTYVGMADDVFALVQYNTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDPAPLSEL 536
Query: 419 LMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIIL 478
++LALKEEDLD N DDLKE+IAEMNTELLK+KAEMLEEYF V ID+ NLSRLP+IL
Sbjct: 537 ILLALKEEDLDPGNDTKDDLKERIAEMNTELLKEKAEMLEEYFSVHIDSSANLSRLPVIL 596
Query: 479 DQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSGEGLQCYK 538
DQYTPDMDR+PEF+LCLGNDV+WEDEK CFQ ++AA+GNFYAMHPPLLPNPSG+G+Q Y
Sbjct: 597 DQYTPDMDRVPEFLLCLGNDVEWEDEKSCFQGVSAAIGNFYAMHPPLLPNPSGDGIQFYS 656
Query: 539 KR 540
KR
Sbjct: 657 KR 658
>UNIPROTKB|Q5JN46 [details] [associations]
symbol:P0401G10.10 "Os01g0958900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008207
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:AP003238
EMBL:AK103319 RefSeq:NP_001045457.1 UniGene:Os.10900 STRING:Q5JN46
GeneID:4325393 KEGG:osa:4325393 ProtClustDB:CLSN2690816
Uniprot:Q5JN46
Length = 724
Score = 1839 (652.4 bits), Expect = 9.8e-190, P = 9.8e-190
Identities = 344/544 (63%), Positives = 441/544 (81%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
MGFRGEALASMTYVGHVTVTTIT+G LHGYRVSYRDGVME+EPK CAAVKGTQ+MVENLF
Sbjct: 107 MGFRGEALASMTYVGHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLF 166
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
YNM+AR+KTLQNS+DDY KIVD +SR A+HH NV+FSCRKHGA RADVHS +TSSRLD+I
Sbjct: 167 YNMVARKKTLQNSNDDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAI 226
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPL 180
R+VYG SV +L++++ S Y D++ +FKMDGY+SN+NYVAKK TM+LF+NDRLV+C L
Sbjct: 227 RSVYGASVVRDLIEIKVS-YEDAADSIFKMDGYISNANYVAKKITMILFINDRLVDCTAL 285
Query: 181 KRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVEL 240
KRA+E VY+AT P+ASKPFIYMSI LP EHVDVN+HPTK+EVSLLNQE I+E I++A+E
Sbjct: 286 KRAIEFVYSATLPQASKPFIYMSIHLPSEHVDVNIHPTKKEVSLLNQERIIETIRNAIEE 345
Query: 241 KLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPS---GSKLQKVPVNKMVRTDSSDPAG 297
KL SN +R ++ Q + S + NP KD S G+K QK+PV++MVRTD +P+G
Sbjct: 346 KLMNSNTTRIFQTQALNLSGIAQANPQKDKVSEASMGSGTKSQKIPVSQMVRTDPRNPSG 405
Query: 298 RLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDI 357
RLH Y + +++ +L +VR+ VR RRN + DL+S EL+ ++D + H GLLDI
Sbjct: 406 RLHTYWHGQS-SNLEKKFDLVSVRNVVRSRRNQKDAGDLSSRHELLVEIDSSFHPGLLDI 464
Query: 358 VRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSE 417
V++C+++G+AD+ +AL+QHNT +YL NVV++SKELMYQ L RF +FNAIQLS+PAPL E
Sbjct: 465 VKNCTYVGLADEAFALIQHNTRLYLVNVVNISKELMYQQALCRFGNFNAIQLSEPAPLQE 524
Query: 418 LLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPII 477
LL++ALK+++L + E DD K +IAE+NTE+LK+ AEM+ EYF + ID G L+RLP++
Sbjct: 525 LLVMALKDDEL--MSDEKDDEKLEIAEVNTEILKENAEMINEYFSIHIDQDGKLTRLPVV 582
Query: 478 LDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSGEGLQCY 537
LDQYTPDMDR+PEFVL LGNDV W+DEK CF+ +A+A+GNFYA+HPP+LPNPSG G+ Y
Sbjct: 583 LDQYTPDMDRLPEFVLALGNDVTWDDEKECFRTVASAVGNFYALHPPILPNPSGNGIHLY 642
Query: 538 KKRK 541
KK +
Sbjct: 643 KKNR 646
>UNIPROTKB|E1BQE0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005712 "chiasma" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0007060
"male meiosis chromosome segregation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IEA] [GO:0045190
"isotype switching" evidence=IEA] [GO:0045950 "negative regulation
of mitotic recombination" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0006298 GO:GO:0001673 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303
GO:GO:0045950 GO:GO:0000289 GO:GO:0000239 GO:GO:0000712
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AADN02001321 IPI:IPI00594951 RefSeq:XP_418828.1
UniGene:Gga.10857 ProteinModelPortal:E1BQE0
Ensembl:ENSGALT00000019702 GeneID:420729 KEGG:gga:420729
NextBio:20823604 Uniprot:E1BQE0
Length = 757
Score = 681 (244.8 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 144/352 (40%), Positives = 222/352 (63%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVTVTT T YR SY DG +++ PK CA +GTQIMVE+LFY
Sbjct: 98 GFRGEALASISHVAHVTVTTKTADAKCAYRASYSDGKIKAPPKPCAGNQGTQIMVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L+N S++Y KI++++ R AIH++ +SFS +K G +DV +++ ++ +D+IR
Sbjct: 158 NVNTRRKALKNPSEEYAKILEVVGRYAIHNSGISFSVKKQGDTVSDVRTLSNATTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + N FKM GY++N+NY KK +LF+N RLVE L+
Sbjct: 218 SIFGNAVSRELIEVGCEDAN----LAFKMKGYITNANYSVKKCIFLLFINHRLVESTALR 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK++ PF+Y+S+ + P++VDVNVHPTK EV L+++ I+E++Q VE K
Sbjct: 274 KAIETVYAAYLPKSTHPFLYLSLEIAPKNVDVNVHPTKHEVHFLHEDSILERVQQHVESK 333
Query: 242 LRQSNDSRTYKEQTV----ESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 297
L SN SR Y QT+ E S S + G+ KV ++MVRTDS +
Sbjct: 334 LLGSNSSRMYFTQTLLPGAECSSSEVVKSAASSSTAAKGTS-DKVYAHQMVRTDSREQ-- 390
Query: 298 RLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNL--NETADLTSIQELIDDVD 347
+L A++Q + +++GP V + A++ + EL++ D
Sbjct: 391 KLDAFLQPV-NNPLSAGPTEETTGDKVGPPEGTVRPQDAEMEDVSELLETAD 441
Score = 410 (149.4 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
Identities = 79/187 (42%), Positives = 124/187 (66%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L +++ H L +++R SF+G +AL+QH T +YL N LS+EL Y
Sbjct: 503 NLTSVLTLQEEISNQSHESLQEMLRDHSFVGCVSPQWALVQHRTKLYLLNTTKLSQELFY 562
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL EL MLAL ED + +E D KE +AE E LK+K
Sbjct: 563 QILIYDFANFGVLRLSEPAPLYELAMLAL--EDPESGWTEEDGPKEGLAEYIVEFLKKKT 620
Query: 455 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 514
EML++YF ++ID GNL+ LP+++D Y P ++ +P F+L L +V+W++EK CF+ ++
Sbjct: 621 EMLKDYFSLEIDEEGNLTGLPLLIDNYIPLLEGLPMFILRLATEVNWDEEKECFETLSKE 680
Query: 515 LGNFYAM 521
L FY++
Sbjct: 681 LSMFYSI 687
Score = 42 (19.8 bits), Expect = 2.1e-37, Sum P(2) = 2.1e-37
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 256 VESSPSSPYNPSKDLHLNPSGSKLQKVP 283
V+ P PSK HL+P + +K P
Sbjct: 448 VQQDAVMPGGPSKSGHLSPEKALPRKRP 475
>MGI|MGI:101938 [details] [associations]
symbol:Mlh1 "mutL homolog 1 (E. coli)" species:10090 "Mus
musculus" [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0002204 "somatic recombination of immunoglobulin
genes involved in immune response" evidence=IGI] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005712 "chiasma"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006298
"mismatch repair" evidence=ISO;IDA;IMP] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IDA;TAS] [GO:0007129 "synapsis" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IMP] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=ISO;IGI] [GO:0032389 "MutLalpha complex"
evidence=IDA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IMP] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0045190 "isotype
switching" evidence=IMP] [GO:0045950 "negative regulation of
mitotic recombination" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 MGI:MGI:101938 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0005654 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0016887 GO:GO:0006298 Reactome:REACT_120463 GO:GO:0001673
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Reactome:REACT_27235
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 OrthoDB:EOG43N7C7
ChiTaRS:Mlh1 GO:GO:0032137 GO:GO:0007060 GO:GO:0043060
GO:GO:0051257 EMBL:AF250844 EMBL:AK168849 EMBL:U60872 EMBL:U59881
EMBL:U59882 EMBL:U59883 EMBL:U59884 IPI:IPI00122425
RefSeq:NP_081086.2 UniGene:Mm.486383 ProteinModelPortal:Q9JK91
SMR:Q9JK91 STRING:Q9JK91 PhosphoSite:Q9JK91 PaxDb:Q9JK91
PRIDE:Q9JK91 Ensembl:ENSMUST00000035079 GeneID:17350 KEGG:mmu:17350
GeneTree:ENSGT00550000074923 InParanoid:Q3TG77 NextBio:291948
Bgee:Q9JK91 CleanEx:MM_MLH1 Genevestigator:Q9JK91
GermOnline:ENSMUSG00000032498 Uniprot:Q9JK91
Length = 760
Score = 662 (238.1 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 139/331 (41%), Positives = 215/331 (64%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR SY DG +++ PK CA +GT I VE+LFY
Sbjct: 98 GFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+I RRK L+N S++Y KI++++ R +IH++ +SFS +K G +DV ++ ++ +D+IR
Sbjct: 158 NIITRRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE A L+
Sbjct: 218 SIFGNAVSRELIEVGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALR 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK + PF+Y+S+ + P++VDVNVHPTK EV L++E I++++Q +E K
Sbjct: 274 KAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIESK 333
Query: 242 LRQSNDSRTYKEQTVESSPSSPYN----PSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 297
L SN SR Y QT+ + P P+ + + + KV +MVRTDS +
Sbjct: 334 LLGSNSSRMYFTQTLLPGLAGPSGEAARPTTGVASSSTSGSGDKVYAYQMVRTDSREQ-- 391
Query: 298 RLHAYVQSKPHTSVASGPNLSAVRSSVRQRR 328
+L A++Q P +S+ GP+ + VR R
Sbjct: 392 KLDAFLQ--PVSSL--GPSQPQDPAPVRGAR 418
Score = 418 (152.2 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 89/236 (37%), Positives = 141/236 (59%)
Query: 286 KMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDD 345
K T S + + H ASG ++A + +RR +N LTS+ L ++
Sbjct: 463 KAAPTSSPGSSRKRHREDSDVEMVENASGKEMTA--ACYPRRRIIN----LTSVLSLQEE 516
Query: 346 VDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFN 405
+ CH L +++R+ SF+G + +AL QH T +YL N LS+EL YQ+++ FA+F
Sbjct: 517 ISERCHETLREMLRNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFG 576
Query: 406 AIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKI 465
++LS+PAPL +L MLAL + +E+D KE +AE E LK+KAEML +YF V+I
Sbjct: 577 VLRLSEPAPLFDLAMLALDSPESGW--TEDDGPKEGLAEYIVEFLKKKAEMLADYFSVEI 634
Query: 466 DTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAM 521
D GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++ FY++
Sbjct: 635 DEEGNLIGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSI 690
>UNIPROTKB|P40692 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0032407 "MutSalpha complex
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
EMBL:CH471055 GO:GO:0009636 GO:GO:0001666 GO:GO:0048477
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 Reactome:REACT_111183
GO:GO:0001673 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0006303
GO:GO:0045950 Orphanet:144 MIM:608089 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 eggNOG:COG0323
EMBL:AC006583 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:U07343 EMBL:U07418
EMBL:U40978 EMBL:U40960 EMBL:U40961 EMBL:U40962 EMBL:U40963
EMBL:U40964 EMBL:U40965 EMBL:U40966 EMBL:U40967 EMBL:U40968
EMBL:U40969 EMBL:U40970 EMBL:U40971 EMBL:U40972 EMBL:U40973
EMBL:U40974 EMBL:U40975 EMBL:U40976 EMBL:U40977 EMBL:U17857
EMBL:U17839 EMBL:U17840 EMBL:U17841 EMBL:U17842 EMBL:U17843
EMBL:U17844 EMBL:U17845 EMBL:U17846 EMBL:U17847 EMBL:U17848
EMBL:U17849 EMBL:U17851 EMBL:U17852 EMBL:U17853 EMBL:U17854
EMBL:U17855 EMBL:U17856 EMBL:AY217549 EMBL:AK295359 EMBL:AK298324
EMBL:AK316074 EMBL:AK316264 EMBL:AC011816 EMBL:BC006850
IPI:IPI00029754 IPI:IPI00742734 PIR:S43085 RefSeq:NP_000240.1
RefSeq:NP_001161089.1 RefSeq:NP_001161090.1 RefSeq:NP_001161091.1
RefSeq:NP_001245200.1 RefSeq:NP_001245202.1 RefSeq:NP_001245203.1
UniGene:Hs.195364 PDB:3NA3 PDB:3RBN PDBsum:3NA3 PDBsum:3RBN
ProteinModelPortal:P40692 SMR:P40692 DIP:DIP-27601N IntAct:P40692
MINT:MINT-257265 STRING:P40692 PhosphoSite:P40692 DMDM:730028
PaxDb:P40692 PRIDE:P40692 DNASU:4292 Ensembl:ENST00000231790
Ensembl:ENST00000455445 Ensembl:ENST00000458205
Ensembl:ENST00000539477 GeneID:4292 KEGG:hsa:4292 UCSC:uc003cgl.3
CTD:4292 GeneCards:GC03P037034 HGNC:HGNC:7127 HPA:CAB013294
MIM:120436 MIM:158320 MIM:609310 neXtProt:NX_P40692 Orphanet:587
PharmGKB:PA240 HOGENOM:HOG000176000 HOVERGEN:HBG006374
InParanoid:P40692 OrthoDB:EOG43N7C7 PhylomeDB:P40692 ChiTaRS:Mlh1
EvolutionaryTrace:P40692 GenomeRNAi:4292 NextBio:16893
PMAP-CutDB:P40692 ArrayExpress:P40692 Bgee:P40692 CleanEx:HS_MLH1
Genevestigator:P40692 GermOnline:ENSG00000076242 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 Uniprot:P40692
Length = 756
Score = 672 (241.6 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 137/315 (43%), Positives = 207/315 (65%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR SY DG +++ PK CA +GTQI VE+LFY
Sbjct: 98 GFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L+N S++Y KI++++ R ++H+ +SFS +K G ADV ++ +S +D+IR
Sbjct: 158 NIATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE L+
Sbjct: 218 SIFGNAVSRELIEIGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLR 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK + PF+Y+S+ + P++VDVNVHPTK EV L++E I+E++Q +E K
Sbjct: 274 KAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESK 333
Query: 242 LRQSNDSRTYKEQTVESSPSSP----YNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 297
L SN SR Y QT+ + P + L + + KV ++MVRTDS +
Sbjct: 334 LLGSNSSRMYFTQTLLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQ-- 391
Query: 298 RLHAYVQ--SKPHTS 310
+L A++Q SKP +S
Sbjct: 392 KLDAFLQPLSKPLSS 406
Score = 391 (142.7 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 502 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 561
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 562 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 619
Query: 455 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 514
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 620 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 679
Query: 515 LGNFYAMHPPLLPNPS 530
FY++ + S
Sbjct: 680 CAMFYSIRKQYISEES 695
Score = 42 (19.8 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 426 EDLDVENSENDDLKEKIA 443
ED DVE E+D KE A
Sbjct: 475 EDSDVEMVEDDSRKEMTA 492
>UNIPROTKB|E2RBM6 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043060 "meiotic metaphase I plate congression" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0016446 "somatic hypermutation
of immunoglobulin genes" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AAEX03013477 RefSeq:XP_534219.2 Ensembl:ENSCAFT00000007703
GeneID:477019 KEGG:cfa:477019 Uniprot:E2RBM6
Length = 757
Score = 655 (235.6 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 141/347 (40%), Positives = 217/347 (62%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR +Y DG +++ PK CA +GTQI VE+LFY
Sbjct: 98 GFRGEALASISHVAHVTITTKTAEAKCAYRATYSDGKLKAPPKPCAGNQGTQITVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L+N S++Y KI++++ R +IH++ +SFS +K G ADV ++ ++ +D+IR
Sbjct: 158 NISTRRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE L+
Sbjct: 218 SIFGNAVSRELIEVGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLR 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK + PF+Y+S+ + P++VDVNVHPTK EV L+++ I+E++Q +E K
Sbjct: 274 KAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIESK 333
Query: 242 LRQSNDSRTYKEQTVESSPSSPYNP--SKDLHLNPSGSKL-QKVPVNKMVRTDSSDPAGR 298
L SN SR Y QT+ + P PS + KV ++MVRTDS + +
Sbjct: 334 LLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTGATPSSTGSGDKVYAHQMVRTDSREQ--K 391
Query: 299 LHAYVQSKPHTSVASGPNLSAV----RSSVRQRRNLNETADLTSIQE 341
L A++Q P + S L AV R+ V R + ++ + E
Sbjct: 392 LDAFLQ--PMSKALSS-QLQAVVPEDRTDVSSGRTGQQDEEMFELPE 435
Score = 396 (144.5 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
Identities = 83/218 (38%), Positives = 131/218 (60%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 503 NLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 562
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL EL MLAL + +E D KE +AE E LK+KA
Sbjct: 563 QILIYDFANFGVLRLSEPAPLFELAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 620
Query: 455 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 514
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 621 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 680
Query: 515 LGNFYAMHPPLLPNPSG-EGLQ---CYKKRKPLKNPVD 548
FY++ + S G Q C P K V+
Sbjct: 681 CAMFYSIRKQYISEESTLSGQQSEVCGSSANPWKWTVE 718
Score = 44 (20.5 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 202 MSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPS 261
+ V+P + DV+ T ++ + + +++ +A + + T + + PS
Sbjct: 407 LQAVVPEDRTDVSSGRTGQQDEEMFELPEPDQV-AATNQGMEEETTEGTSETSEKKGPPS 465
Query: 262 SPYNPSK 268
SP NP K
Sbjct: 466 SPGNPRK 472
>UNIPROTKB|F1MPG0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:DAAA02053630 EMBL:DAAA02053631 IPI:IPI00705361
RefSeq:NP_001069462.2 UniGene:Bt.30133 Ensembl:ENSBTAT00000022288
GeneID:533652 KEGG:bta:533652 NextBio:20876104 ArrayExpress:F1MPG0
Uniprot:F1MPG0
Length = 758
Score = 652 (234.6 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 130/307 (42%), Positives = 203/307 (66%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR Y DG +++ PK CA +GTQI VE+LFY
Sbjct: 98 GFRGEALASISHVAHVTITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L+N S++Y KI++++ R A+H++ + FS +K G ADV ++ ++ +D+IR
Sbjct: 158 NISTRRKALKNPSEEYGKILEVVGRYAVHNSGIGFSVKKQGETVADVRTLPNATTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++E + + FKM+GY+SN+NY KK +LF+N RLVE A L+
Sbjct: 218 SIFGNAVSRELIEVECED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESASLR 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK++ PF+Y+S+ + P++VDVNVHPTK EV L+++ I+E++Q +E +
Sbjct: 274 KAIETVYAAYLPKSTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSILERLQQHIESR 333
Query: 242 LRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKL----QKVPVNKMVRTDSSDPAG 297
L SN SRTY QT+ P + + + S +V ++MVRTD +
Sbjct: 334 LLGSNASRTYFTQTLLPGLPGPSGEAVKSTASVTSSSTAGSGDRVYAHQMVRTDCREQ-- 391
Query: 298 RLHAYVQ 304
+L A++Q
Sbjct: 392 KLDAFLQ 398
Score = 389 (142.0 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 75/187 (40%), Positives = 122/187 (65%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 504 NLTSVLSLQEEINERGHETLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTRLSEELFY 563
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 564 QILVYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 621
Query: 455 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 514
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 622 EMLADYFSLEIDEEGNLVGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 681
Query: 515 LGNFYAM 521
FY++
Sbjct: 682 CAMFYSI 688
>UNIPROTKB|E9PCU2 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 GO:GO:0005524 GO:GO:0005634
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AC006583 KO:K08734 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 RefSeq:NP_001161089.1
UniGene:Hs.195364 DNASU:4292 GeneID:4292 KEGG:hsa:4292 CTD:4292
HGNC:HGNC:7127 ChiTaRS:Mlh1 GenomeRNAi:4292 NextBio:16893
IPI:IPI00924824 ProteinModelPortal:E9PCU2 SMR:E9PCU2 PRIDE:E9PCU2
Ensembl:ENST00000435176 UCSC:uc011ayc.2 ArrayExpress:E9PCU2
Bgee:E9PCU2 Uniprot:E9PCU2
Length = 658
Score = 649 (233.5 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 133/311 (42%), Positives = 203/311 (65%)
Query: 6 EALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIA 65
EALAS+++V HVT+TT T YR SY DG +++ PK CA +GTQI VE+LFYN+
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 66 RRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYG 125
RRK L+N S++Y KI++++ R ++H+ +SFS +K G ADV ++ +S +D+IR+++G
Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIRSIFG 123
Query: 126 VSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVE 185
+V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE L++A+E
Sbjct: 124 NAVSRELIEIGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIE 179
Query: 186 IVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQS 245
VYAA PK + PF+Y+S+ + P++VDVNVHPTK EV L++E I+E++Q +E KL S
Sbjct: 180 TVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGS 239
Query: 246 NDSRTYKEQTVESSPSSP----YNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHA 301
N SR Y QT+ + P + L + + KV ++MVRTDS + +L A
Sbjct: 240 NSSRMYFTQTLLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQ--KLDA 297
Query: 302 YVQ--SKPHTS 310
++Q SKP +S
Sbjct: 298 FLQPLSKPLSS 308
Score = 391 (142.7 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 404 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 463
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 464 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 521
Query: 455 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 514
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 522 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 581
Query: 515 LGNFYAMHPPLLPNPS 530
FY++ + S
Sbjct: 582 CAMFYSIRKQYISEES 597
Score = 42 (19.8 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 426 EDLDVENSENDDLKEKIA 443
ED DVE E+D KE A
Sbjct: 377 EDSDVEMVEDDSRKEMTA 394
>RGD|620937 [details] [associations]
symbol:Mlh1 "mutL homolog 1, colon cancer, nonpolyposis type 2
(E. coli)" species:10116 "Rattus norvegicus" [GO:0000239
"pachytene" evidence=IEA;ISO] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA;ISO] [GO:0000712 "resolution
of meiotic recombination intermediates" evidence=IEA;ISO]
[GO:0000793 "condensed chromosome" evidence=ISO] [GO:0000794
"condensed nuclear chromosome" evidence=ISO] [GO:0000795
"synaptonemal complex" evidence=IEA;ISO;IDA] [GO:0001666 "response
to hypoxia" evidence=IEP] [GO:0001673 "male germ cell nucleus"
evidence=IEA;ISO] [GO:0002204 "somatic recombination of
immunoglobulin genes involved in immune response" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003697
"single-stranded DNA binding" evidence=IEA;ISO;IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005712 "chiasma"
evidence=IEA;ISO;IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006298
"mismatch repair" evidence=IEA;ISO;IBA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA;ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=ISO] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;IBA] [GO:0007140 "male meiosis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;IEP;ISO]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA;ISO;IBA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=IEA;ISO] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;ISO;IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA;ISO;IBA] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IEA;ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045132 "meiotic chromosome segregation"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IEA;ISO]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA;ISO] [GO:0048477 "oogenesis" evidence=IEA;ISO]
[GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 655 (235.6 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 136/308 (44%), Positives = 204/308 (66%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR SY DG +++ PK CA +GT I VE+LFY
Sbjct: 98 GFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+I R+K L+N S++Y KI++++ R +IH++ +SFS +K G +DV ++ ++ +D+IR
Sbjct: 158 NIITRKKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE A LK
Sbjct: 218 SIFGNAVSRELIEVGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALK 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK + PF+Y+ + + P++VDVNVHPTK EV L++E I+E++Q +E K
Sbjct: 274 KAIEAVYAAYLPKNTHPFLYLILEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESK 333
Query: 242 LRQSNDSRTYKEQTVESSPSSPYNPS-KDL----HLNPSGSKLQKVPVNKMVRTDSSDPA 296
L SN SR Y QT+ + P + K + SGS KV +MVRTDS D
Sbjct: 334 LLGSNSSRMYFTQTLLPGLAGPSGEAVKSTTGIASSSTSGSG-DKVHAYQMVRTDSRDQ- 391
Query: 297 GRLHAYVQ 304
+L A++Q
Sbjct: 392 -KLDAFMQ 398
Score = 373 (136.4 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 84/220 (38%), Positives = 133/220 (60%)
Query: 326 QRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANV 385
+RR +N T+ L S+QE I+D R H L +++R+ +F+G + +AL QH T +YL N
Sbjct: 499 RRRIINLTSVL-SLQEEIND--RG-HETLREMLRNHTFVGCVNPQWALAQHQTKLYLLNT 554
Query: 386 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEM 445
LS+EL YQ+++ FA+F ++L +PAPL + MLAL + +E D KE +AE
Sbjct: 555 TKLSEELFYQILIYDFANFGVLRLPEPAPLFDFAMLALDSPESGW--TEEDGPKEGLAEY 612
Query: 446 NTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEK 505
E LK+KA+ML +YF V+ID GNL LP+++D Y P ++ +P F+L L +V+W++E+
Sbjct: 613 IVEFLKKKAKMLADYFSVEIDEEGNLIGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEE 672
Query: 506 CCFQAIAAALGNFYAMHPPLLPNPSG-EGLQCYKKRKPLK 544
C F++++ FY++ + S G Q P K
Sbjct: 673 C-FESLSKECAVFYSIRKQYILEESALSGQQSDMPGSPSK 711
Score = 48 (22.0 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 426 EDLDVENSENDDLKEKIA 443
ED DVE END KE A
Sbjct: 477 EDSDVEMMENDSRKEMTA 494
>UNIPROTKB|P97679 [details] [associations]
symbol:Mlh1 "DNA mismatch repair protein Mlh1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 655 (235.6 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 136/308 (44%), Positives = 204/308 (66%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR SY DG +++ PK CA +GT I VE+LFY
Sbjct: 98 GFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLQAPPKPCAGNQGTLITVEDLFY 157
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+I R+K L+N S++Y KI++++ R +IH++ +SFS +K G +DV ++ ++ +D+IR
Sbjct: 158 NIITRKKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVSDVRTLPNATTVDNIR 217
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE A LK
Sbjct: 218 SIFGNAVSRELIEVGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESAALK 273
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK + PF+Y+ + + P++VDVNVHPTK EV L++E I+E++Q +E K
Sbjct: 274 KAIEAVYAAYLPKNTHPFLYLILEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESK 333
Query: 242 LRQSNDSRTYKEQTVESSPSSPYNPS-KDL----HLNPSGSKLQKVPVNKMVRTDSSDPA 296
L SN SR Y QT+ + P + K + SGS KV +MVRTDS D
Sbjct: 334 LLGSNSSRMYFTQTLLPGLAGPSGEAVKSTTGIASSSTSGSG-DKVHAYQMVRTDSRDQ- 391
Query: 297 GRLHAYVQ 304
+L A++Q
Sbjct: 392 -KLDAFMQ 398
Score = 373 (136.4 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 84/220 (38%), Positives = 133/220 (60%)
Query: 326 QRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANV 385
+RR +N T+ L S+QE I+D R H L +++R+ +F+G + +AL QH T +YL N
Sbjct: 499 RRRIINLTSVL-SLQEEIND--RG-HETLREMLRNHTFVGCVNPQWALAQHQTKLYLLNT 554
Query: 386 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEM 445
LS+EL YQ+++ FA+F ++L +PAPL + MLAL + +E D KE +AE
Sbjct: 555 TKLSEELFYQILIYDFANFGVLRLPEPAPLFDFAMLALDSPESGW--TEEDGPKEGLAEY 612
Query: 446 NTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEK 505
E LK+KA+ML +YF V+ID GNL LP+++D Y P ++ +P F+L L +V+W++E+
Sbjct: 613 IVEFLKKKAKMLADYFSVEIDEEGNLIGLPLLIDSYVPPLEGLPIFILRLATEVNWDEEE 672
Query: 506 CCFQAIAAALGNFYAMHPPLLPNPSG-EGLQCYKKRKPLK 544
C F++++ FY++ + S G Q P K
Sbjct: 673 C-FESLSKECAVFYSIRKQYILEESALSGQQSDMPGSPSK 711
Score = 48 (22.0 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 426 EDLDVENSENDDLKEKIA 443
ED DVE END KE A
Sbjct: 477 EDSDVEMMENDSRKEMTA 494
>UNIPROTKB|A8HM54 [details] [associations]
symbol:MLH1 "Mismatch repair protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:DS496108
GO:GO:0000795 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 RefSeq:XP_001690102.1
ProteinModelPortal:A8HM54 STRING:A8HM54 EnsemblPlants:EDP09840
GeneID:5715471 KEGG:cre:CHLREDRAFT_146633 OMA:NDEENNT
ProtClustDB:CLSN2920798 Uniprot:A8HM54
Length = 1007
Score = 629 (226.5 bits), Expect = 1.1e-94, Sum P(2) = 1.1e-94
Identities = 127/261 (48%), Positives = 179/261 (68%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESE-PKACAAVKGTQIMVENL 59
+GFRGEAL S+++V H+ VTT+ + +G+RV+Y+D ME+ PK AAV GT I VE+L
Sbjct: 128 LGFRGEALCSISFVSHMAVTTMARDAQYGFRVTYKDSAMEAPGPKPVAAVPGTTITVEDL 187
Query: 60 FYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHT-NVSFSCRKHGAARADVHSIATSSRLD 118
FYN+ RRK L+++S++Y I+D L R A++ V FSCR+HG R D+ + A SRLD
Sbjct: 188 FYNVPTRRKALKSASEEYGLILDTLGRYAVYSAPGVGFSCRRHGDGRPDISTTAAGSRLD 247
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFV-------FKMDGYVSNSNYVA-KKTTMVLFV 170
++R VYG VA L+ L + + V K++G +S +NY + KKT +VLF+
Sbjct: 248 AVRAVYGADVARELLPLALAAGGGTGPEVPVEGPLGIKLEGLISGANYGSGKKTVLVLFI 307
Query: 171 NDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELI 230
N R VECAPL+RA+E VYAA PKASKP++++ + LPP V+VN+HPTKREV ++Q +
Sbjct: 308 NGRCVECAPLRRALEGVYAALLPKASKPWLFLDLRLPPRQVEVNMHPTKREVGFMHQAEV 367
Query: 231 VEKIQSAVELKLRQSNDSRTY 251
+E I+ AVE KL SNDSRT+
Sbjct: 368 IEVIRGAVEAKLLASNDSRTF 388
Score = 345 (126.5 bits), Expect = 1.1e-94, Sum P(2) = 1.1e-94
Identities = 81/229 (35%), Positives = 126/229 (55%)
Query: 312 ASGPNLSAVRSSVRQRRNLNETADL--TSIQELIDDVDRNCHSGLLDIVRHCSFIGMADD 369
ASG +L+A ++ R R A ++ L+ + + +CH L D++R +F+G+AD
Sbjct: 647 ASG-DLAAAAAAARALRRTPPAAVTRDAAVLSLLAEAEADCHGSLADLLREHTFVGIADG 705
Query: 370 VYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLD 429
ALLQH T +YL +V +LS +L YQL LRR+ + L P +SEL+ L L+ ++
Sbjct: 706 SLALLQHGTRLYLVDVGALSADLFYQLALRRWEQPLRLALEPPPLVSELVDLGLQLLEVQ 765
Query: 430 VENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIP 489
E D E++ + TELL+Q LE + +D +G L+ +P++L+ P+ R+
Sbjct: 766 GEWQPEDGSPEELGALVTELLQQNRPELEREIGLVVDEQGRLASVPLLLEGLLPEPSRLA 825
Query: 490 EFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPL-----LPNPSGEG 533
+ V+ L DVDW+ + A+A AL N YA PPL P PSG G
Sbjct: 826 DLVVALAKDVDWDSPRERALALARALANMYAARPPLPQGGGAPGPSGSG 874
>UNIPROTKB|H0Y818 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
Ensembl:ENST00000456676 Uniprot:H0Y818
Length = 679
Score = 672 (241.6 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 137/315 (43%), Positives = 207/315 (65%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR SY DG +++ PK CA +GTQI VE+LFY
Sbjct: 90 GFRGEALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFY 149
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L+N S++Y KI++++ R ++H+ +SFS +K G ADV ++ +S +D+IR
Sbjct: 150 NIATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTVDNIR 209
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N RLVE L+
Sbjct: 210 SIFGNAVSRELIEIGCED----KTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLR 265
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VYAA PK + PF+Y+S+ + P++VDVNVHPTK EV L++E I+E++Q +E K
Sbjct: 266 KAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESK 325
Query: 242 LRQSNDSRTYKEQTVESSPSSP----YNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 297
L SN SR Y QT+ + P + L + + KV ++MVRTDS +
Sbjct: 326 LLGSNSSRMYFTQTLLPGLAGPSGEMVKSTTSLTSSSTSGSSDKVYAHQMVRTDSREQ-- 383
Query: 298 RLHAYVQ--SKPHTS 310
+L A++Q SKP +S
Sbjct: 384 KLDAFLQPLSKPLSS 398
Score = 262 (97.3 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 55/132 (41%), Positives = 85/132 (64%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 494 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 553
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 554 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 611
Query: 455 EMLEEYFCVKID 466
EML +YF ++ID
Sbjct: 612 EMLADYFSLEID 623
Score = 42 (19.8 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 426 EDLDVENSENDDLKEKIA 443
ED DVE E+D KE A
Sbjct: 467 EDSDVEMVEDDSRKEMTA 484
>FB|FBgn0011659 [details] [associations]
symbol:Mlh1 "Mlh1" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 EMBL:AE013599
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
CTD:4292 GeneTree:ENSGT00550000074923 RefSeq:NP_477022.1
UniGene:Dm.26257 ProteinModelPortal:A1Z7C1 SMR:A1Z7C1 STRING:A1Z7C1
PRIDE:A1Z7C1 EnsemblMetazoa:FBtr0088790 GeneID:35796
KEGG:dme:Dmel_CG11482 UCSC:CG11482-RA FlyBase:FBgn0011659
InParanoid:A1Z7C1 OrthoDB:EOG470RZ8 PhylomeDB:A1Z7C1
GenomeRNAi:35796 NextBio:795251 Bgee:A1Z7C1 Uniprot:A1Z7C1
Length = 664
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 189/525 (36%), Positives = 306/525 (58%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V H+++ T T GY+ +Y DG ++ +PK CA +GT I +E+LFY
Sbjct: 100 GFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQPKPCAGNQGTIICIEDLFY 159
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
NM RR+ L++ ++++ ++ ++L+R A+H+ V F+ RK G A+ + + SSR ++IR
Sbjct: 160 NMPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIR 219
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+YG +++ L LE S ++ + F+ + ++ NY AKK M+LF+N RLVE L+
Sbjct: 220 IIYGAAISKEL--LEFSHRDEV--YKFEAECLITQVNYSAKKCQMLLFINQRLVESTALR 275
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+V+ +YA P+ PF+YMS+ LPP+++DVNVHPTK EV L QE IV+ I+ VE +
Sbjct: 276 TSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEAR 335
Query: 242 LRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHA 301
L SN +RT+ +Q P +P DL K Q++ +MVRTDS++ +L
Sbjct: 336 LLGSNATRTFYKQL--RLPGAP-----DLDETQLADKTQRIYPKEMVRTDSTEQ--KLDK 386
Query: 302 YVQS--KPHTSVASGPNLSAVR---SSVR-QRRNLNETADLTSIQELIDDVDRNCHSGLL 355
++ K + V+S + A R S R + L+S+ ++ V+R C L
Sbjct: 387 FLAPLVKSDSGVSSSSSQEASRLPEESFRVTAAKKSREVRLSSVLDMRKRVERQCSVQLR 446
Query: 356 DIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPL 415
+++ ++G D+ AL QH T +Y+ N S S+EL YQ ++ F + + I +S P PL
Sbjct: 447 STLKNLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITISPPLPL 506
Query: 416 SELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLP 475
ELL+L+L+ E + D K ++A+ ++L +KA ++ EYF ++I G L LP
Sbjct: 507 KELLILSLESEAAGWTPEDGD--KAELADGAADILLKKAPIMREYFGLRISEDGMLESLP 564
Query: 476 IILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYA 520
+L Q+ P + +P ++L L +VDWE E CF+ FYA
Sbjct: 565 SLLHQHRPCVAHLPVYLLRLATEVDWEQETRCFETFCRETARFYA 609
>ASPGD|ASPL0000056766 [details] [associations]
symbol:AN0126 species:162425 "Emericella nidulans"
[GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0000713
"meiotic heteroduplex formation" evidence=IEA] [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032390 "MutLbeta complex" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005739
GO:GO:0005524 EMBL:BN001308 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404 RefSeq:XP_657730.1
ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 196/558 (35%), Positives = 299/558 (53%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVM-------ESEPKACAAVKGTQI 54
GFRGEALAS++++ H+TVTT T +R Y DG + + PKA A GTQI
Sbjct: 121 GFRGEALASISHIAHLTVTTKTADSSCAWRAHYADGKLVPPKPGQSAAPKATAGRGGTQI 180
Query: 55 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
VE+LFYN+ RR+ +++S++Y KI+D++ R A+H + V+FSCRKHG A + +
Sbjct: 181 TVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDAGVSISTAVAL 240
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRL 174
+ +D IR ++G +VA+ LV+ + F G V+N+NY K+TT++LF+N R
Sbjct: 241 NTIDRIRQIHGSAVANELVEFSVKD----EKLGFTSSGLVTNANYHVKRTTILLFINHRS 296
Query: 175 VECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKI 234
VE +KRAVE YA+ PK PF+Y+ + + P +DVNVHPTKREV+ LN++ I++ I
Sbjct: 297 VESTAIKRAVEQTYASFLPKGGHPFVYIDLEIEPHRLDVNVHPTKREVNFLNEDEIIDNI 356
Query: 235 QSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK--DLHLNPSGSKLQKVPV-NKMVRTD 291
+ + KL Q + SRT+ QT+ S +P S+ D P K P N +VRTD
Sbjct: 357 CAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDADAAPKTPAPTKKPYENSLVRTD 416
Query: 292 SS-DPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETAD-------LTSIQELI 343
S + + S+P ++ + +V + T D LTS++ L
Sbjct: 417 SRVRKITSMLSPATSQPPSATLNLEGQLENTQTVLDDGLIYTTTDREPLKIALTSVKNLR 476
Query: 344 DDVDRNCHSGLLDIVRHCSFIGMAD--DVYALLQHNTHMYLANVVSLSKELMYQLVLRRF 401
V + H L + + +++G+ D A +Q +YL + E YQL L F
Sbjct: 477 AAVRSSMHQSLTETIASHTYVGLVDVNRRIAAVQAGVKLYLIDYGMFCAEFFYQLGLTDF 536
Query: 402 AHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIA---EMNTELLKQKAEMLE 458
+F IQL P L +LL +A E +L + + ++ +E + E+ + L + EML
Sbjct: 537 GNFGTIQLEPPPKLIDLLHIAA-ESELQQASEDYEEKREIFSAAPELVAKTLIDRREMLS 595
Query: 459 EYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNF 518
EYF ++I G L +P++L Y P + ++P F+L LG VDW E+ CF+ A L F
Sbjct: 596 EYFSIQISDDGYLLTIPLLLKGYVPCLGKLPRFLLRLGPYVDWTSEEECFRTFLAELAAF 655
Query: 519 YAMHPPLLPN-PSGEGLQ 535
Y P LP P E L+
Sbjct: 656 YT--PEQLPRMPPSEELR 671
>UNIPROTKB|Q5BH54 [details] [associations]
symbol:AN0126.2 "DNA mismatch repair protein Mlh1, putative
(AFU_orthologue; AFUA_5G11700)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 EMBL:BN001308
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACD01000004 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404
RefSeq:XP_657730.1 ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 196/558 (35%), Positives = 299/558 (53%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVM-------ESEPKACAAVKGTQI 54
GFRGEALAS++++ H+TVTT T +R Y DG + + PKA A GTQI
Sbjct: 121 GFRGEALASISHIAHLTVTTKTADSSCAWRAHYADGKLVPPKPGQSAAPKATAGRGGTQI 180
Query: 55 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
VE+LFYN+ RR+ +++S++Y KI+D++ R A+H + V+FSCRKHG A + +
Sbjct: 181 TVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGDAGVSISTAVAL 240
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRL 174
+ +D IR ++G +VA+ LV+ + F G V+N+NY K+TT++LF+N R
Sbjct: 241 NTIDRIRQIHGSAVANELVEFSVKD----EKLGFTSSGLVTNANYHVKRTTILLFINHRS 296
Query: 175 VECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKI 234
VE +KRAVE YA+ PK PF+Y+ + + P +DVNVHPTKREV+ LN++ I++ I
Sbjct: 297 VESTAIKRAVEQTYASFLPKGGHPFVYIDLEIEPHRLDVNVHPTKREVNFLNEDEIIDNI 356
Query: 235 QSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK--DLHLNPSGSKLQKVPV-NKMVRTD 291
+ + KL Q + SRT+ QT+ S +P S+ D P K P N +VRTD
Sbjct: 357 CAEIRSKLSQVDSSRTFLTQTLLPSIQTPKRSSQVQDADAAPKTPAPTKKPYENSLVRTD 416
Query: 292 SS-DPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETAD-------LTSIQELI 343
S + + S+P ++ + +V + T D LTS++ L
Sbjct: 417 SRVRKITSMLSPATSQPPSATLNLEGQLENTQTVLDDGLIYTTTDREPLKIALTSVKNLR 476
Query: 344 DDVDRNCHSGLLDIVRHCSFIGMAD--DVYALLQHNTHMYLANVVSLSKELMYQLVLRRF 401
V + H L + + +++G+ D A +Q +YL + E YQL L F
Sbjct: 477 AAVRSSMHQSLTETIASHTYVGLVDVNRRIAAVQAGVKLYLIDYGMFCAEFFYQLGLTDF 536
Query: 402 AHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIA---EMNTELLKQKAEMLE 458
+F IQL P L +LL +A E +L + + ++ +E + E+ + L + EML
Sbjct: 537 GNFGTIQLEPPPKLIDLLHIAA-ESELQQASEDYEEKREIFSAAPELVAKTLIDRREMLS 595
Query: 459 EYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNF 518
EYF ++I G L +P++L Y P + ++P F+L LG VDW E+ CF+ A L F
Sbjct: 596 EYFSIQISDDGYLLTIPLLLKGYVPCLGKLPRFLLRLGPYVDWTSEEECFRTFLAELAAF 655
Query: 519 YAMHPPLLPN-PSGEGLQ 535
Y P LP P E L+
Sbjct: 656 YT--PEQLPRMPPSEELR 671
>SGD|S000004777 [details] [associations]
symbol:MLH1 "Protein required for mismatch repair in mitosis
and meiosis" species:4932 "Saccharomyces cerevisiae" [GO:0000710
"meiotic mismatch repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0000404
"loop DNA binding" evidence=IDA] [GO:0032135 "DNA insertion or
deletion binding" evidence=IDA] [GO:0032139 "dinucleotide insertion
or deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0005524 "ATP binding" evidence=IEA;IMP] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000713
"meiotic heteroduplex formation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IPI] [GO:0032390 "MutLbeta complex"
evidence=IPI] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 SGD:S000004777 Prosite:PS00058
GO:GO:0005739 GO:GO:0005524 GO:GO:0016887 EMBL:BK006946
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:Z49705 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
GeneTree:ENSGT00550000074923 OrthoDB:EOG43XZBN EMBL:U07187
EMBL:DQ356633 EMBL:DQ356634 EMBL:DQ356635 EMBL:DQ356636
EMBL:DQ356637 EMBL:DQ356638 EMBL:DQ356639 EMBL:DQ356640
EMBL:DQ356641 EMBL:DQ356642 EMBL:DQ356643 EMBL:DQ356644
EMBL:DQ356645 EMBL:DQ356646 PIR:S54525 RefSeq:NP_013890.1
ProteinModelPortal:P38920 SMR:P38920 DIP:DIP-2412N IntAct:P38920
MINT:MINT-625234 STRING:P38920 EnsemblFungi:YMR167W GeneID:855203
KEGG:sce:YMR167W CYGD:YMR167w NextBio:978693 Genevestigator:P38920
GermOnline:YMR167W GO:GO:0000713 GO:GO:0000710 Uniprot:P38920
Length = 769
Score = 559 (201.8 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 122/296 (41%), Positives = 187/296 (63%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V VTVTT K +RVSY +G M PK A GT I+VE+LF+
Sbjct: 95 GFRGEALASISHVARVTVTTKVKEDRCAWRVSYAEGKMLESPKPVAGKDGTTILVEDLFF 154
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRL-DSI 120
N+ +R + L++ +D+Y+KI+D++ R AIH ++ FSC+K G + + S+ S + D I
Sbjct: 155 NIPSRLRALRSHNDEYSKILDVVGRYAIHSKDIGFSCKKFGDSNYSL-SVKPSYTVQDRI 213
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKT-TMVLFVNDRLVECAP 179
RTV+ SVASNL+ S+ D + + +DG V N N+++KK+ + + F+N+RLV C
Sbjct: 214 RTVFNKSVASNLITFHISKVEDLN--LESVDGKVCNLNFISKKSISPIFFINNRLVTCDL 271
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
L+RA+ VY+ PK ++PFIY+ IV+ P VDVNVHPTKREV L+Q+ I+EKI + +
Sbjct: 272 LRRALNSVYSNYLPKGNRPFIYLGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLH 331
Query: 240 LKLRQSNDSRTYKEQTVESS-PSS--PYNPSKDLHLNPSGSKLQKVPVNKMVRTDS 292
+L + SRT+K ++ ++ P S P+N + + N + +V N +S
Sbjct: 332 AELSAIDTSRTFKASSISTNKPESLIPFNDTIESDRNRKSLRQAQVVENSYTTANS 387
Score = 239 (89.2 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 66/213 (30%), Positives = 110/213 (51%)
Query: 325 RQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDV--YALLQHNTHMYL 382
++R N+N LTSI++L + VD + H L DI + +++G+ D+ A +QH+ ++L
Sbjct: 504 KERVNVN----LTSIKKLREKVDDSIHRELTDIFANLNYVGVVDEERRLAAIQHDLKLFL 559
Query: 383 ANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKI 442
+ S+ EL YQ+ L FA+F I L ++++ L E D N +D KEKI
Sbjct: 560 IDYGSVCYELFYQIGLTDFANFGKINLQSTNVSDDIVLYNLLSE-FDELN--DDASKEKI 616
Query: 443 AEMNTELLKQKAEMLEEYFCVKIDTRG--------NLSRLPIILDQYTPDMDRIPEFVLC 494
++ + ML EY+ +++ G L LP++L Y P + ++P F+
Sbjct: 617 ISKIWDM----SSMLNEYYSIELVNDGLDNDLKSVKLKSLPLLLKGYIPSLVKLPFFIYR 672
Query: 495 LGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLP 527
LG +VDWEDE+ C I + Y P ++P
Sbjct: 673 LGKEVDWEDEQECLDGILREIALLYI--PDMVP 703
>UNIPROTKB|B7Z821 [details] [associations]
symbol:MLH1 "cDNA FLJ55289, highly similar to DNA mismatch
repair protein Mlh1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 UniGene:Hs.195364
HGNC:HGNC:7127 HOVERGEN:HBG006374 ChiTaRS:Mlh1 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 EMBL:AK302807
IPI:IPI01012620 SMR:B7Z821 STRING:B7Z821 Ensembl:ENST00000536378
Uniprot:B7Z821
Length = 460
Score = 391 (142.7 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 76/196 (38%), Positives = 124/196 (63%)
Query: 335 DLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMY 394
+LTS+ L ++++ H L +++ + SF+G + +AL QH T +YL N LS+EL Y
Sbjct: 261 NLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFY 320
Query: 395 QLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKA 454
Q+++ FA+F ++LS+PAPL +L MLAL + +E D KE +AE E LK+KA
Sbjct: 321 QILIYDFANFGVLRLSEPAPLFDLAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKA 378
Query: 455 EMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAA 514
EML +YF ++ID GNL LP+++D Y P ++ +P F+L L +V+W++EK CF++++
Sbjct: 379 EMLADYFSLEIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKE 438
Query: 515 LGNFYAMHPPLLPNPS 530
FY++ + S
Sbjct: 439 CAMFYSIRKQYISEES 454
Score = 334 (122.6 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 73/167 (43%), Positives = 106/167 (63%)
Query: 150 MDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 209
M+GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P+
Sbjct: 1 MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQ 60
Query: 210 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSP----YN 265
+VDVNVHPTK EV L++E I+E++Q +E KL SN SR Y QT+ + P
Sbjct: 61 NVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEMVK 120
Query: 266 PSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ--SKPHTS 310
+ L + + KV ++MVRTDS + +L A++Q SKP +S
Sbjct: 121 STTSLTSSSTSGSSDKVYAHQMVRTDSREQ--KLDAFLQPLSKPLSS 165
Score = 42 (19.8 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 426 EDLDVENSENDDLKEKIA 443
ED DVE E+D KE A
Sbjct: 234 EDSDVEMVEDDSRKEMTA 251
>CGD|CAL0005779 [details] [associations]
symbol:MLH1 species:5476 "Candida albicans" [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032390 "MutLbeta
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000713 "meiotic heteroduplex formation"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 CGD:CAL0005779 Prosite:PS00058
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACQ01000151
EMBL:AACQ01000146 eggNOG:COG0323 KO:K08734 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
RefSeq:XP_712616.1 RefSeq:XP_712766.1 ProteinModelPortal:Q59SL0
STRING:Q59SL0 GeneID:3645595 GeneID:3645758 KEGG:cal:CaO19.11638
KEGG:cal:CaO19.4162 Uniprot:Q59SL0
Length = 717
Score = 528 (190.9 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 123/321 (38%), Positives = 188/321 (58%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMES----------EPKACAAVKG 51
GFRGEALAS++++ ++V T Y+ Y +G + S EPK A G
Sbjct: 98 GFRGEALASISHISRLSVITKQPNSKLAYKAYYMNGQLCSSNFKSSNTNVEPKPIAGKDG 157
Query: 52 TQIMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSI 111
TQI+VE+LFYN+ +R + L++ SD++ KI+D++ R AIH NV FSC+K+G V++
Sbjct: 158 TQIIVEDLFYNIPSRLRGLKSKSDEFAKILDIVGRYAIHCDNVGFSCKKYGDPLQQVNTR 217
Query: 112 ATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM-VLFV 170
+ IR VYG ++A+ L++++ ND V K+ G ++N+NY KK ++F+
Sbjct: 218 PQMPIKERIRVVYGSAIANELLEIDGIS-NDELGLV-KVSGVMTNANYNNKKKIQPIIFI 275
Query: 171 NDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELI 230
N RLV C PLKRA+ V++ PK S F Y+S+ + PE++DVNVHPTKREV LN++ I
Sbjct: 276 NHRLVTCEPLKRAINAVFSYFLPKGSHSFYYLSLEIKPENLDVNVHPTKREVRFLNEDEI 335
Query: 231 VEKIQSAVELKLRQSNDSRTYKEQTV----ESSPSSPYNPSKDLHLNPSGSKLQKVPVNK 286
++ I S + KL + SR +K Q+V +S L PS K ++ NK
Sbjct: 336 IDTIVSEIHTKLSSVDTSRKFKTQSVITKRRNSDEELEEHQLPKTLQPSLKKYRQE--NK 393
Query: 287 MVRTDSSDPAGRLHAYVQSKP 307
MVR D+S +L +++Q +P
Sbjct: 394 MVRVDASQ--SKLSSFMQQQP 412
Score = 185 (70.2 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 55/217 (25%), Positives = 99/217 (45%)
Query: 310 SVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADD 369
S+ P+ ++ R + +L SI L +D+ L +I + ++G+ D
Sbjct: 462 SILESPSKLEMKIETNHSRKQVQV-NLDSIASLKNDLTLIIDKPLTNIFNNAVYVGIVDP 520
Query: 370 VYAL--LQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLM-LALKEE 426
L Q++ ++L + ++ E YQ+ L F +F I+ +P L ++L L K E
Sbjct: 521 WKRLCCFQYDVKLFLCDYAAMLLEFYYQIGLHEFCNFGEIEFDEPIKLIDILQPLYDKNE 580
Query: 427 DLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMD 486
DL EK+ + K +M +EYF + ID L+ LP++L PD +
Sbjct: 581 DLIP--------MEKVIHA---IFHMK-DMFKEYFQIVIDDDKQLTTLPMLLVGVEPDFN 628
Query: 487 RIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHP 523
++P + LG +++ DEK C + + + FY P
Sbjct: 629 KLPYLIYRLGTKINYGDEKDCLRGVLRQIALFYLPEP 665
>ZFIN|ZDB-GENE-040426-1600 [details] [associations]
symbol:mlh1 "mutL homolog 1, colon cancer,
nonpolyposis type 2 (E. coli)" species:7955 "Danio rerio"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 ZFIN:ZDB-GENE-040426-1600 GO:GO:0005524
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0007141 GO:GO:0051026 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 HOVERGEN:HBG006374
GO:GO:0043060 GeneTree:ENSGT00550000074923 EMBL:BX936318
IPI:IPI00614918 UniGene:Dr.77529 Ensembl:ENSDART00000133388
Uniprot:B8A6F5
Length = 725
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 148/348 (42%), Positives = 221/348 (63%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR +Y DG ++S PK CA +GT I VE+LFY
Sbjct: 96 GFRGEALASISHVAHVTITTKTADAKCAYRANYCDGKLKSPPKPCAGNQGTLISVEDLFY 155
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L++ S++Y++IV+++SR AIH++ SFS +K G ADV ++ +S LD+IR
Sbjct: 156 NVSTRRKALKSPSEEYSRIVEVVSRYAIHNSGKSFSVKKQGEMVADVKTLPNASVLDNIR 215
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
V+GV+V+ L+++E + F FK+ GY+SN+NY KK ++LF+N RLVE + LK
Sbjct: 216 VVFGVAVSRELIEVECED----QKFAFKVKGYISNANYSVKKCILILFINHRLVESSALK 271
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A+E VY A PK + PF+Y+S+ + P+++DVNVHPTK EV L+++ I+E IQ +E K
Sbjct: 272 KAIETVYTAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSIIESIQKHIESK 331
Query: 242 LRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHA 301
L SN SRTY QT+ S+ + +K + S ++V ++MVRTDS A +L A
Sbjct: 332 LLGSNSSRTYFTQTLLPGLSASASVAKAS--SSSADSQERVYAHQMVRTDSK--AQKLDA 387
Query: 302 YVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQ--ELIDDVD 347
++Q AS + +A R + + DL + EL+ D
Sbjct: 388 FLQPS-----ASSSSTAAQRKTEKTSSTSTAVQDLVELDDAELLTAAD 430
Score = 434 (157.8 bits), Expect = 3.1e-40, P = 3.1e-40
Identities = 93/233 (39%), Positives = 145/233 (62%)
Query: 289 RTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDR 348
+TD+ P A + +PH +L+A +S+ +RR + LTSI+EL D ++
Sbjct: 440 QTDAQPPGDE--APPRKRPHVEEVK-EDLTA--ASLPRRRIVK----LTSIKELRDQIEL 490
Query: 349 NCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQ 408
H GL +++++ SF+G + L+QH T +YL N LS+EL YQ+++ F +F ++
Sbjct: 491 QTHKGLQELLQNHSFVGSVSPQWTLVQHQTKLYLLNTTKLSQELFYQILVYDFGNFGVLR 550
Query: 409 LSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTR 468
LS+PAPL +L MLAL E+ +E D KE +A+ + LKQKAEMLEEYF ++ID
Sbjct: 551 LSNPAPLYDLAMLALDSEESGW--TEEDGPKEGLAQYIVDFLKQKAEMLEEYFSLEIDAE 608
Query: 469 GNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAM 521
GNL+ LP++LD YTP M+ +P F+L L +V+W+ EK CF+ + +FY++
Sbjct: 609 GNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDKEKECFREFSVECSHFYSI 661
>POMBASE|SPBC1703.04 [details] [associations]
symbol:mlh1 "MutL family protein Mlh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 PomBase:SPBC1703.04 Prosite:PS00058
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0044732
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 EMBL:D89212 PIR:T43016 PIR:T50317
RefSeq:NP_596199.1 ProteinModelPortal:Q9P7W6 STRING:Q9P7W6
EnsemblFungi:SPBC1703.04.1 GeneID:2539949 KEGG:spo:SPBC1703.04
OrthoDB:EOG43XZBN NextBio:20801092 Uniprot:Q9P7W6
Length = 684
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 170/547 (31%), Positives = 275/547 (50%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-------MESEPKACAAVKGTQI 54
GFRGEALAS+++V VTV T +H ++ Y DG M P+ CA +GT I
Sbjct: 99 GFRGEALASISHVAKVTVVTKLSSDIHAWKAFYVDGALAPISPGMSPAPQPCAGKQGTVI 158
Query: 55 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
E+LFYN+ +R+ L+N S+++ +I+ L+ + AIH+ VSF+C+K G A + +
Sbjct: 159 TAEDLFYNVRSRKSALKNGSEEFRRIMILVQKYAIHNDQVSFNCKKVGDTVASLSLSSRL 218
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRL 174
S+ D IR +YG VAS+L E SS F +G++SN+++ KK+ ++LF+N+RL
Sbjct: 219 SKADKIRHIYGPRVASHLRDFSLGE-GQSSIVGFSANGFISNADFQDKKSNLILFINNRL 277
Query: 175 VECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKI 234
VE L+ A+E YA K + F+Y+S+ + PE +DVNVHP+KR V L + I I
Sbjct: 278 VESVELRHALEETYAKYLHKGASYFVYLSLNMSPEQLDVNVHPSKRIVHFLYDQEIATSI 337
Query: 235 QSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSD 294
+ L +++ R+Y Q + S S+ N S K + N +VRTD +
Sbjct: 338 CDKLGEILERTDTERSYPLQAMIPSISNTKNAES------SSQKAVRTYENYLVRTDPRE 391
Query: 295 PAGRLHA---YVQSKPHT----------SVASGPNLSAVRSSVRQRRNLNE--TADLTSI 339
+ + ++Q + S S N + ++ + E + DL SI
Sbjct: 392 RSIKSMLSDNFLQRSSNNYDNEIIEKVDSANSNKNATNDIKDLQTEEIVEEGNSIDLESI 451
Query: 340 QELIDDVDRNCHSGLLDIVRHCSFIGMADDV--YALLQHNTHMYLANVVSLSKELMYQLV 397
+ L V + H +I+ ++G+ A +QHN +Y+ + LS L YQ+
Sbjct: 452 KSLQKQVINSMHVLATNILTEHKYVGLVCPTRRIAAVQHNIGLYVVDYGKLSYHLFYQIC 511
Query: 398 LRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEML 457
L F ++ L P +S+L + +ED SE+ EK T LL + +ML
Sbjct: 512 LTEFGNYGEFVLETPLSISDLFEIVNGDED----KSES----EKF----TRLLVSRRDML 559
Query: 458 EEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDV-DWEDEKCCFQAIAAALG 516
++YF + + + G L+ +P++ +Y P +++P + L DW DEK C I A+
Sbjct: 560 KDYFSISVTSGGLLTAVPMLSPKYHPPFEQLPLLISSLTPKFFDWLDEKSCLNGIMKAIA 619
Query: 517 NFYAMHP 523
FY P
Sbjct: 620 KFYVPLP 626
>UNIPROTKB|I3LT92 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:CU993803
Ensembl:ENSSSCT00000027443 Uniprot:I3LT92
Length = 687
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 130/318 (40%), Positives = 205/318 (64%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V HVT+TT T YR Y DG +++ PK CA +GTQI VE+LFY
Sbjct: 29 GFRGEALASISHVAHVTITTKTADGKCAYRAHYSDGKLKAPPKPCAGNQGTQITVEDLFY 88
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK L+N S++Y KI++++ R +IH++ +SFS +K G ADV ++ ++ +D+IR
Sbjct: 89 NISTRRKALKNPSEEYGKILEVVGRYSIHNSGISFSVKKQGETVADVRTLPNATTVDNIR 148
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+++G +V+ L+++E + + FKM+GY+SN+NY KK +LF+N R ++ + L+
Sbjct: 149 SIFGNAVSRELIEVECED----KTLAFKMNGYISNANYSVKKCIFLLFIN-RNIDSSNLR 203
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+ VYAA FPK + P + S+ + P++VDVNVHPTK EV L+++ I+E++Q +E +
Sbjct: 204 ACIATVYAAYFPKQAHPSLSTSLEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIESR 263
Query: 242 LRQSNDSRTYKEQTVESSPSSP----YNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 297
L SN SRTY QT+ + P + D+ + +GS KV +MVRTD +
Sbjct: 264 LLGSNASRTYFTQTLLPGLTGPSGEAVKSAADVTPSSTGSG-DKVYAYQMVRTDCREQ-- 320
Query: 298 RLHAYVQSKPHTSVASGP 315
+L A++Q S++S P
Sbjct: 321 KLDAFLQPASK-SLSSQP 337
Score = 399 (145.5 bits), Expect = 4.4e-35, P = 4.4e-35
Identities = 103/353 (29%), Positives = 178/353 (50%)
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLP--PEHVDVNVHPTKREVSLLNQELIVEKIQSA 237
+K A ++ ++T K + Y + + +D + P + +S Q ++ E A
Sbjct: 290 VKSAADVTPSST-GSGDKVYAYQMVRTDCREQKLDAFLQPASKSLSSQPQAIVPEDRTDA 348
Query: 238 VELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG 297
+ RQ + E+ +E P+ +K L ++ K R S P
Sbjct: 349 FGSEARQQD------EEMLEL-PAPSEVAAKHQSLEEDTAERTSDLSEK--RGPPSSPGN 399
Query: 298 RLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDI 357
+ +S V + + +RR +N LTS+ L ++++ H L ++
Sbjct: 400 PRKRHRESSDVEMVEDANRKEMTAACIPRRRIIN----LTSVLTLQEEINERGHETLREM 455
Query: 358 VRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSE 417
+ + SF+G + +AL QH T +YL N LS+EL YQ+++ FA+F ++LS+PAPL +
Sbjct: 456 LHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSEPAPLFD 515
Query: 418 LLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPII 477
L MLAL + +E D KE +AE E LK+KAEML +YF ++ID GNL LP++
Sbjct: 516 LAMLALDSPESGW--TEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLVGLPLL 573
Query: 478 LDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPS 530
+D Y P ++ +P F+L L +V+W++EK CF++++ FY++ + S
Sbjct: 574 IDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEES 626
>UNIPROTKB|Q7SA79 [details] [associations]
symbol:NCU08309 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00018 Prosite:PS00058 GO:GO:0005739 GO:GO:0005524
InterPro:IPR018247 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 EMBL:AABX02000053
HSSP:P23367 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0000713 GO:GO:0000710 GO:GO:0032139
GO:GO:0000404 RefSeq:XP_962522.1 ProteinModelPortal:Q7SA79
STRING:Q7SA79 EnsemblFungi:EFNCRT00000008399 GeneID:3878663
KEGG:ncr:NCU08309 Uniprot:Q7SA79
Length = 751
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 137/374 (36%), Positives = 218/374 (58%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVM------ES-EPKACAAVKGTQI 54
GFRGEALAS++++ H+TVTT T+ +R Y G + +S +PK A +GTQI
Sbjct: 121 GFRGEALASISHIAHLTVTTKTQESNCAWRAHYGSGKLVPAKPGQSPDPKPVAGRQGTQI 180
Query: 55 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
VE+LFYN+ RR+ +++SD+Y KI+D++ R A+H ++V+FSC+K+G + + A +
Sbjct: 181 TVEDLFYNIPTRRRAFRSTSDEYNKIIDMVGRYAVHCSHVAFSCKKYGESSTSIAIQANA 240
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRL 174
S D IR +YG SVA+ L++ S+ + FK G +N+NY KKTT++LF+N R
Sbjct: 241 SSTDRIRQIYGGSVANELIEYSTSD----DRWGFKAQGLATNANYSLKKTTLLLFINHRC 296
Query: 175 VECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKI 234
VE + +++AVE YA+ PK PF+Y+S+ + PE VDVNVHPTKREV+ LN+ I++ I
Sbjct: 297 VESSNIRKAVEQTYASFLPKNGHPFVYLSLEIAPERVDVNVHPTKREVNFLNEHEIIQAI 356
Query: 235 QSAVELKLRQSNDSRTYKEQTVESS---PSSPYNPSKDLHLNPSG--SKLQKVPV---NK 286
+ KL + SRT+ QT+ +S S SG S +K P +
Sbjct: 357 CEHIRSKLAAVDTSRTFLTQTLLPGGTWSASDQQASSSTPSKTSGAASGARKTPARNESS 416
Query: 287 MVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNET-ADLTSIQELIDD 345
+VRTD++ ++ + + P +++A+G + S+ + +N T D+ I+ +
Sbjct: 417 LVRTDTN--MRKITSMLP--PASTMAAGSRGDEIPSTSGVKATINGTNMDVEMIK--YET 470
Query: 346 VDRNCHSGLLDIVR 359
V+R + L VR
Sbjct: 471 VEREATACRLISVR 484
Score = 277 (102.6 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 90/335 (26%), Positives = 145/335 (43%)
Query: 209 EHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK 268
EH+ + + L Q L+ SA + + S S+T + +P
Sbjct: 358 EHIRSKLAAVDTSRTFLTQTLLPGGTWSASDQQASSSTPSKT--SGAASGARKTPAR--N 413
Query: 269 DLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVA-SGPNLSAVRSSVRQR 327
+ L + + ++K+ M+ S+ AG + S +G N+
Sbjct: 414 ESSLVRTDTNMRKI--TSMLPPASTMAAGSRGDEIPSTSGVKATINGTNMDVEMIKYETV 471
Query: 328 RNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDV--YALLQHNTHMYLANV 385
L S++EL +V H L +I + +F+G+ D+ A +Q +YL +
Sbjct: 472 EREATACRLISVRELRAEVREEMHHELTEIFANHTFVGIVDERRRLAAIQGGVKLYLVDY 531
Query: 386 VSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEE-----D----LDVENSEND 436
+ E YQL L F +F I+ P L ELL +A + E D +D + +
Sbjct: 532 GRVCYEYFYQLGLTDFGNFGTIRFDPPLDLRELLSMAAESERTATADATGRVDKDGDDEM 591
Query: 437 DLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLG 496
D+ E I E+ + L ++ EML EYF +I G L +P+++ YTP M ++P F+L LG
Sbjct: 592 DVSE-IVELVADQLVERREMLLEYFSFEISPAGELLSIPLLIKGYTPSMAKLPRFLLELG 650
Query: 497 NDVDWEDEKCCFQAIAAALGNFYAMHPPLLPNPSG 531
VDW +EK CF+ L FY P LP G
Sbjct: 651 PRVDWSEEKACFEGFLKELAIFYV--PERLPATIG 683
>UNIPROTKB|Q755L3 [details] [associations]
symbol:AFL199C "AFL199Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
EMBL:AE016819 GenomeReviews:AE016819_GR HSSP:P23367 KO:K08734
OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 OrthoDB:EOG43XZBN
GO:GO:0000713 GO:GO:0000710 GO:GO:0032139 GO:GO:0000404
RefSeq:NP_985351.1 ProteinModelPortal:Q755L3 STRING:Q755L3
EnsemblFungi:AAS53175 GeneID:4621576 KEGG:ago:AGOS_AFL199C
PhylomeDB:Q755L3 Uniprot:Q755L3
Length = 771
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 141/420 (33%), Positives = 241/420 (57%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS++++ + V T TK + ++ Y +GVM EPK A GT I+V++LFY
Sbjct: 139 GFRGEALASISHIARLHVVTKTKENQCAWKAVYENGVMVGEPKPTAGKDGTTILVQDLFY 198
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ +R + L++ S+++ KIVD++ + AIH V FSC+K G + ++ TSS+ D IR
Sbjct: 199 NVPSRLRALRSPSEEFAKIVDVVGKYAIHSDGVGFSCKKFGETQYALNVRGTSSKSDKIR 258
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTT-MVLFVNDRLVECAPL 180
V+G V +NLV+++ S D + G ++ ++ KK+ V F+N+RLV C PL
Sbjct: 259 AVFGAPVVANLVEVDISA--DPEHGLTSSSGQITTPDFNNKKSIPAVFFINNRLVSCDPL 316
Query: 181 KRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVEL 240
+RA+ VY+ PK +KPFIYMS+ + PE+VDVNVHPTKREV L +E ++E+I + +
Sbjct: 317 RRALSQVYSNFLPKGNKPFIYMSLHITPENVDVNVHPTKREVRFLYEEELIERIGNLLHE 376
Query: 241 KLRQSNDSRTYKEQTVESSP-SSPYNPSKDLHLNPSGSKLQ-KVPVNKMVRTDSSDPAGR 298
+L Q + SRT+K ++ SS + + P+ ++ + K N +VRTD S +
Sbjct: 377 RLSQLDTSRTFKPGSLTPGKHSSTVSSAFRQSATPASTQPKAKRAENMLVRTDGSQ--AK 434
Query: 299 LHAYVQ-SKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDI 357
+ YV+ S+ TS S+ +S+R++ + + +L SI E D + + +
Sbjct: 435 ITNYVRASQSSTS-------SSFSTSLRKKSHAAASDELGSIGEDSQDTATSMTTSTQEP 487
Query: 358 --VRHCSFIGMADDVYALLQHN-THMYLANVVSLSKEL---MYQLVLRRFAHFNAIQLSD 411
+ + + + ++ Y ++Q T + L ++ +L +E+ M++ + FA + + D
Sbjct: 488 NHTKSRAILTLLNNEYEVVQRERTEVNLTSIKTLKQEVDEDMHKELTSVFADMTYVGVVD 547
Score = 242 (90.2 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 70/237 (29%), Positives = 109/237 (45%)
Query: 291 DSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNC 350
DS D A + Q HT + L V QR +LTSI+ L +VD +
Sbjct: 472 DSQDTATSMTTSTQEPNHTKSRAILTLLNNEYEVVQRERTE--VNLTSIKTLKQEVDEDM 529
Query: 351 HSGLLDIVRHCSFIGMADDVYAL--LQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQ 408
H L + +++G+ D L +QH ++L + SL EL YQ+ L FA+F I
Sbjct: 530 HKELTSVFADMTYVGVVDATRRLASIQHGLKLFLVDYGSLCNELFYQIGLTDFANFGKIY 589
Query: 409 LSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKI--D 466
+ D E LA+ + ++N+ ++ E T+ L EMLE Y+ ++I D
Sbjct: 590 IQDEVENRE--GLAIYQLLSKIDNASQSNILEI-----TQQLWDMREMLENYYSIEICGD 642
Query: 467 ----TRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFY 519
T + +P++L Y P + ++P F+ +G VDW EK C + I L FY
Sbjct: 643 ETDLTNVRIKSVPLLLKDYVPPLSKLPFFLYRMGTKVDWSSEKECLEGILRQLALFY 699
Score = 45 (20.9 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 90 HHTNVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYN 141
HH V+ KH AA + AT+S L Y + + S + LEAS N
Sbjct: 13 HHVRVT---EKHSAA---LILNATTSYLQRCVPQYRMHLPSRIKALEASVVN 58
>DICTYBASE|DDB_G0287393 [details] [associations]
symbol:mlh1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0032407 "MutSalpha
complex binding" evidence=ISS;IBA] [GO:0016887 "ATPase activity"
evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0032390 "MutLbeta
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 dictyBase:DDB_G0287393 Prosite:PS00058
GO:GO:0005524 GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AAFI02000100 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 RefSeq:XP_637285.1 HSSP:P23367
ProteinModelPortal:Q54KD8 STRING:Q54KD8 EnsemblProtists:DDB0232418
GeneID:8626116 KEGG:ddi:DDB_G0287393 KO:K08734 OMA:SIQVVVK
ProtClustDB:CLSZ2846671 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 Uniprot:Q54KD8
Length = 884
Score = 365 (133.5 bits), Expect = 1.7e-51, Sum P(2) = 1.7e-51
Identities = 90/282 (31%), Positives = 142/282 (50%)
Query: 246 NDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS 305
ND+ + + + +P NP + P SK Q+ + T ++ A +S
Sbjct: 539 NDNLIFNDNSENEAPRDIDNPLSSV--TPIKSKEQRQQQSTTTTTTTTTTT----ATTKS 592
Query: 306 KPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIG 365
S L ++ + +LTSI+ LI + N H GL + C F+G
Sbjct: 593 NSPASKNDIKKLQEHTFITPRKTRKYKQVELTSIKTLISEFQSNVHDGLKEFFNDCVFVG 652
Query: 366 MADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKE 425
D YAL+Q +YL N+ +++KEL YQL L RF+ F++I+ S + LL+++L
Sbjct: 653 CLDHSYALVQFGKKLYLINLENITKELFYQLSLLRFSDFDSIKFSQSLSIYSLLLVSL-- 710
Query: 426 EDLDVEN-SENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPD 484
D + E+D K+KIA+ T+LL K E+L EYF ++I+ G L +P +LD Y P
Sbjct: 711 -DSPLSGWMESDGPKDKIADYLTKLLISKKELLNEYFSIEINEDGELVGIPQVLDHYVPC 769
Query: 485 MDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAMHPPLL 526
D +P F+L L +V+WE EK CF I + +F+ + P L
Sbjct: 770 TDNLPIFLLKLATEVEWEFEKECFAGIVKEISSFFKIEPSFL 811
Score = 258 (95.9 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 63/204 (30%), Positives = 107/204 (52%)
Query: 148 FKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLP 207
F M G+ S++NY +KK +LF+N RLV+ LK +E VY+ PK + PF+++ +++P
Sbjct: 328 FTMKGFFSSTNYNSKKINFILFINGRLVDSKNLKTGLEQVYSKYLPKGTHPFMFIRLLVP 387
Query: 208 PEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTV-ESSPSSPYNP 266
P+++DVN+HPTK EV +L++E I+E IQ V+ +L S++S+T+ Q + +
Sbjct: 388 PKNIDVNIHPTKSEVKILHEEQIIEFIQQKVDQELSISSNSKTFSTQILLPGFDQDNVSS 447
Query: 267 SKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHT-SVASGPNLSAVRSSVR 325
S+ N S Q N ++++P R +K S + L A + +
Sbjct: 448 SQKKQKNSQSSSTQTKSTN-----NNNNPTSRKEPIEYAKDKIRSDSKSQTLDAFLNPMD 502
Query: 326 QRRNLNETADLTSIQEL--IDDVD 347
N + + D + DDVD
Sbjct: 503 YNNNNDSSIDDNDGSGIGRYDDVD 526
Score = 242 (90.2 bits), Expect = 1.7e-51, Sum P(2) = 1.7e-51
Identities = 58/170 (34%), Positives = 97/170 (57%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVM--------ESEPKACAAVKGTQ 53
GFRGEAL+S+++V H+ + T T YR Y +G + S+PK CA V GTQ
Sbjct: 153 GFRGEALSSISHVSHLKILTKTADSPCAYRACYLNGKLTPPSPNEQSSDPKPCAGVNGTQ 212
Query: 54 IMVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIAT 113
I VE+LF+N +R+ L+N+ D++++IV L+ + AI++ VSF +K G +VH+
Sbjct: 213 ITVEDLFFNTPSRKNVLKNTVDEHSRIVLLMKKYAINNPTVSFILKKQGDPTPEVHTSGG 272
Query: 114 SSRL--DSIRTVYGVSVASNL--VQLEASEYNDSSSFVFKMDG-YVSNSN 158
+ L D I ++YG ++ L + ++ + N ++ + G + NSN
Sbjct: 273 QNSLEKDVIGSLYGTDLSKELKIITIDPNNPNPNNDDDDNISGSQIKNSN 322
Score = 37 (18.1 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 272 LNPSGSKLQKVPVNKMVRTDSSDPAGRLH 300
+ PS KL+ VN +T+S+ ++
Sbjct: 806 IEPSFLKLRDTQVNNQQQTNSTTTTNNIN 834
>UNIPROTKB|Q7RE54 [details] [associations]
symbol:PY05214 "HMLH1 gene product-related" species:73239
"Plasmodium yoelii yoelii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 HSSP:P23367 KO:K08734
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AABL01001642
RefSeq:XP_725646.1 ProteinModelPortal:Q7RE54 STRING:Q7RE54
GeneID:3790985 KEGG:pyo:PY05214 EuPathDB:PlasmoDB:PY05214
Uniprot:Q7RE54
Length = 885
Score = 235 (87.8 bits), Expect = 4.1e-51, Sum P(3) = 4.1e-51
Identities = 70/234 (29%), Positives = 115/234 (49%)
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 179
I+ +YG SV+ L+ + +E +F FK G +S +Y +KK++ + F+NDRLVE
Sbjct: 308 IQKIYGRSVSKELIPIFVNE--KIPTF-FKCYGLISGPSYNSKKSSYIFFINDRLVESNI 364
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
LKRA E Y K + P++Y+++ L + VD+NVHPTK+EV L Q+ I I +E
Sbjct: 365 LKRACENQYNNFLGKGNYPWVYLALRLKYDIVDINVHPTKKEVHFLYQDEIATLISKKIE 424
Query: 240 LKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSD-PAGR 298
L+ N+ R+Y TV + LN +G K+ + K +T S+ G
Sbjct: 425 QVLKNINNMRSYNAPTVNLLQTK-------FDLN-TG----KIDIKKEKQTGSNGYSTGY 472
Query: 299 LHAYVQSKPHTSV---ASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRN 349
+ Y S ++ + N S V+ ++ +R + +T + D N
Sbjct: 473 SNGYSNSHSNSHIDGQRGSDNKSGVKKAIDTKRVRTDYKQITLTNYFVKKSDDN 526
Score = 234 (87.4 bits), Expect = 4.1e-51, Sum P(3) = 4.1e-51
Identities = 49/124 (39%), Positives = 77/124 (62%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-MESEPKACAAVKGTQIMVENLF 60
GFRGEALAS+++V ++T+TT + Y SY+DG + EP AC+ GT I ++LF
Sbjct: 108 GFRGEALASISHVSYLTITTKKRKSSSCYTCSYKDGKPTQKEPTACSGKDGTIIRFDDLF 167
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
YNM R KTL N +D+Y K +D+L + +IH+ +V+F+C+K + D+ + + I
Sbjct: 168 YNMKTRLKTL-NHNDEYNKCLDVLQKYSIHYPHVTFTCKKWLSNVVDLSTYNAGKGIGGI 226
Query: 121 RTVY 124
+Y
Sbjct: 227 GGIY 230
Score = 193 (73.0 bits), Expect = 4.1e-51, Sum P(3) = 4.1e-51
Identities = 49/203 (24%), Positives = 99/203 (48%)
Query: 322 SSVRQRRNL-NETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHM 380
S++ R L +E ++TSI++L + L + +++ ++G D++++L+Q+ +
Sbjct: 560 SNICYDRKLPSECDEITSIKKLRKICEEKEKKELTECLKNSIYVGPVDNMHSLIQYKEKL 619
Query: 381 YLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEED---LDVENSENDD 437
+ + + KE++YQ +L R + P PL +LL++ L + N N +
Sbjct: 620 LMIKMPLIIKEIIYQSILNRIGKIPPFKFDPPIPLYDLLLVGLNNSYSGFFENPNYANKN 679
Query: 438 LKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGN 497
++ E+ ++ EM +YF + I+ G++ P +Y P + +P L L
Sbjct: 680 IEIVCNELE-QVFYSYEEMYADYFSIVIED-GHIVTFPACCGEYFPGQEFLPLLFLRLAI 737
Query: 498 DVDWEDEKCCFQAIAAALGNFYA 520
+D+E+E C I L NFY+
Sbjct: 738 QIDYENEINCINGICYLLANFYS 760
Score = 48 (22.0 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 12/54 (22%), Positives = 30/54 (55%)
Query: 220 REVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLN 273
++++L N + + + E+ L + N+ T++ +E+ + YN S+D H++
Sbjct: 511 KQITLTNY-FVKKSDDNKKEITLFEDNEYETFQ---LEAPKPALYNVSQDKHIS 560
>GENEDB_PFALCIPARUM|PF11_0184 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein
MLH1, putative" species:5833 "Plasmodium falciparum" [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367
KO:K08734 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 RefSeq:XP_001347855.1
ProteinModelPortal:Q8IIJ0 EnsemblProtists:PF11_0184:mRNA
GeneID:810731 KEGG:pfa:PF11_0184 EuPathDB:PlasmoDB:PF3D7_1117800
HOGENOM:HOG000282300 OMA:DNNITCN ProtClustDB:CLSZ2500887
Uniprot:Q8IIJ0
Length = 1016
Score = 233 (87.1 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 47/124 (37%), Positives = 77/124 (62%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-MESEPKACAAVKGTQIMVENLF 60
GFRGEALAS+++V ++T+T+ + Y +Y+DG + EP C+ GT I ++LF
Sbjct: 140 GFRGEALASISHVSYLTITSKKRNSPFCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLF 199
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
YNM AR KT+ N +D+Y K +++L + AIH+ NVSF+C+K + D+++ +
Sbjct: 200 YNMPARLKTM-NPNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNTQKVGKGIGGY 258
Query: 121 RTVY 124
+Y
Sbjct: 259 AGIY 262
Score = 205 (77.2 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 179
I+ VYG +++ L + E S FK G +SN Y KK + F+NDRLVE
Sbjct: 410 IQKVYGRNISKELSTIFLKE--KSIPTFFKCYGLISNPTYNGKKGCYIFFINDRLVESNI 467
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
+K++ E Y+ K + P+IY+S+ L + VD+NVHPTK+EV L QE I I ++
Sbjct: 468 IKKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQ 527
Query: 240 LKLRQSNDSRTY 251
L+ ++ RT+
Sbjct: 528 EFLKSFHNMRTF 539
Score = 186 (70.5 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 47/203 (23%), Positives = 93/203 (45%)
Query: 320 VRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTH 379
+ + + R+ E +++SI++L + L + +++ ++G D++++L+Q+
Sbjct: 695 ISNKIYDRKYPCEADEISSIKKLKMICEEKEKKELTECLKNSIYVGPVDNMHSLIQYKEK 754
Query: 380 MYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLK 439
+ L + + KE+ YQ +L R + P PL +LL++A+ + N K
Sbjct: 755 LLLIKMPLIIKEVTYQSILNRLGKIPPFEFDPPIPLYDLLLVAVNNSYSGFYENPNYANK 814
Query: 440 --EKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGN 497
EK+ ++ EM +YF + I+ G + P +Y P + +P L L
Sbjct: 815 NIEKVCNELEQIFYTYNEMYSDYFSIIIED-GCIVTFPACCGEYFPGQEFLPFLFLRLAT 873
Query: 498 DVDWEDEKCCFQAIAAALGNFYA 520
+D+ E C I L NFY+
Sbjct: 874 QIDYSKEINCINGICYLLANFYS 896
Score = 40 (19.1 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 55 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTN 93
M+ N +N A++ L +D+Y K D + A H N
Sbjct: 623 MLYNGDHNGDAKQIDLYEHNDEYNKTYDQTNIRANLHMN 661
>UNIPROTKB|Q8IIJ0 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein MLH1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367 KO:K08734
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
RefSeq:XP_001347855.1 ProteinModelPortal:Q8IIJ0
EnsemblProtists:PF11_0184:mRNA GeneID:810731 KEGG:pfa:PF11_0184
EuPathDB:PlasmoDB:PF3D7_1117800 HOGENOM:HOG000282300 OMA:DNNITCN
ProtClustDB:CLSZ2500887 Uniprot:Q8IIJ0
Length = 1016
Score = 233 (87.1 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 47/124 (37%), Positives = 77/124 (62%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-MESEPKACAAVKGTQIMVENLF 60
GFRGEALAS+++V ++T+T+ + Y +Y+DG + EP C+ GT I ++LF
Sbjct: 140 GFRGEALASISHVSYLTITSKKRNSPFCYTCNYKDGKPTQDEPTVCSGKNGTIIRFDDLF 199
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
YNM AR KT+ N +D+Y K +++L + AIH+ NVSF+C+K + D+++ +
Sbjct: 200 YNMPARLKTM-NPNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNTQKVGKGIGGY 258
Query: 121 RTVY 124
+Y
Sbjct: 259 AGIY 262
Score = 205 (77.2 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 49/132 (37%), Positives = 74/132 (56%)
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 179
I+ VYG +++ L + E S FK G +SN Y KK + F+NDRLVE
Sbjct: 410 IQKVYGRNISKELSTIFLKE--KSIPTFFKCYGLISNPTYNGKKGCYIFFINDRLVESNI 467
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
+K++ E Y+ K + P+IY+S+ L + VD+NVHPTK+EV L QE I I ++
Sbjct: 468 IKKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQ 527
Query: 240 LKLRQSNDSRTY 251
L+ ++ RT+
Sbjct: 528 EFLKSFHNMRTF 539
Score = 186 (70.5 bits), Expect = 7.4e-47, Sum P(3) = 7.4e-47
Identities = 47/203 (23%), Positives = 93/203 (45%)
Query: 320 VRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTH 379
+ + + R+ E +++SI++L + L + +++ ++G D++++L+Q+
Sbjct: 695 ISNKIYDRKYPCEADEISSIKKLKMICEEKEKKELTECLKNSIYVGPVDNMHSLIQYKEK 754
Query: 380 MYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSENDDLK 439
+ L + + KE+ YQ +L R + P PL +LL++A+ + N K
Sbjct: 755 LLLIKMPLIIKEVTYQSILNRLGKIPPFEFDPPIPLYDLLLVAVNNSYSGFYENPNYANK 814
Query: 440 --EKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGN 497
EK+ ++ EM +YF + I+ G + P +Y P + +P L L
Sbjct: 815 NIEKVCNELEQIFYTYNEMYSDYFSIIIED-GCIVTFPACCGEYFPGQEFLPFLFLRLAT 873
Query: 498 DVDWEDEKCCFQAIAAALGNFYA 520
+D+ E C I L NFY+
Sbjct: 874 QIDYSKEINCINGICYLLANFYS 896
Score = 40 (19.1 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 55 MVENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTN 93
M+ N +N A++ L +D+Y K D + A H N
Sbjct: 623 MLYNGDHNGDAKQIDLYEHNDEYNKTYDQTNIRANLHMN 661
>WB|WBGene00003373 [details] [associations]
symbol:mlh-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 269 (99.8 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
Identities = 73/244 (29%), Positives = 122/244 (50%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V V + + Y+ ++ DG M ++ K A GT I +LFY
Sbjct: 94 GFRGEALASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAAGKNGTCITATDLFY 153
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RR + ++ + D L R AIH +VSF+ R++ A D + + D +
Sbjct: 154 NLPTRRNKMTTHGEEAKMVNDTLLRFAIHRPDVSFALRQNQAG--DFRTKGDGNFRDVVC 211
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNY-VA--KKTT---MVLFVNDRLV 175
+ G VA ++ L + +F + ++++ +A +KT+ +F+N R V
Sbjct: 212 NLLGRDVADTILPLSLNSTRLKFTFTGHISKPIASATAAIAQNRKTSRSFFSVFINGRSV 271
Query: 176 ECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ 235
C LK ++ V A A F + + + +DVNVHPTK V L +E I+E+I+
Sbjct: 272 RCDILKHPIDEVLGARQLHAQ--FCALHLQIDETRIDVNVHPTKNSVIFLEKEEIIEEIR 329
Query: 236 SAVE 239
+ E
Sbjct: 330 AYFE 333
Score = 178 (67.7 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
Identities = 44/191 (23%), Positives = 98/191 (51%)
Query: 338 SIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLV 397
SI+ L ++ N L ++ + +F+G + L+Q T +Y + ++ +E YQ+
Sbjct: 504 SIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQVLIQFGTSLYHLDFSTVLREFFYQIS 563
Query: 398 LRRFAHFNAIQLSDPAP-LSELLMLALKEEDLDVENSENDDLKEKIAEMNT--ELLKQKA 454
+ F ++ + +L + P + E+L L L E N ++ + +LL + A
Sbjct: 564 VFSFGNYGSYRLDEEPPAIIEILEL-LGELSTREPNYAAFEVFANVENRFAAEKLLAEHA 622
Query: 455 EMLEEYFCVKIDTRGN----LSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQA 510
++L +YF +K+D N ++ +P ++ + P ++++P + L +VD++DE+ F+
Sbjct: 623 DLLHDYFAIKLDQLENGRLHITEIPSLVHYFVPQLEKLPFLIATLVLNVDYDDEQNTFRT 682
Query: 511 IAAALGNFYAM 521
I A+G+ + +
Sbjct: 683 ICRAIGDLFTL 693
>UNIPROTKB|Q9XU10 [details] [associations]
symbol:mlh-1 "Protein MLH-1" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887
"ATPase activity" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 269 (99.8 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
Identities = 73/244 (29%), Positives = 122/244 (50%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+++V V + + Y+ ++ DG M ++ K A GT I +LFY
Sbjct: 94 GFRGEALASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAAGKNGTCITATDLFY 153
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RR + ++ + D L R AIH +VSF+ R++ A D + + D +
Sbjct: 154 NLPTRRNKMTTHGEEAKMVNDTLLRFAIHRPDVSFALRQNQAG--DFRTKGDGNFRDVVC 211
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNY-VA--KKTT---MVLFVNDRLV 175
+ G VA ++ L + +F + ++++ +A +KT+ +F+N R V
Sbjct: 212 NLLGRDVADTILPLSLNSTRLKFTFTGHISKPIASATAAIAQNRKTSRSFFSVFINGRSV 271
Query: 176 ECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ 235
C LK ++ V A A F + + + +DVNVHPTK V L +E I+E+I+
Sbjct: 272 RCDILKHPIDEVLGARQLHAQ--FCALHLQIDETRIDVNVHPTKNSVIFLEKEEIIEEIR 329
Query: 236 SAVE 239
+ E
Sbjct: 330 AYFE 333
Score = 178 (67.7 bits), Expect = 8.5e-34, Sum P(2) = 8.5e-34
Identities = 44/191 (23%), Positives = 98/191 (51%)
Query: 338 SIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLV 397
SI+ L ++ N L ++ + +F+G + L+Q T +Y + ++ +E YQ+
Sbjct: 504 SIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQVLIQFGTSLYHLDFSTVLREFFYQIS 563
Query: 398 LRRFAHFNAIQLSDPAP-LSELLMLALKEEDLDVENSENDDLKEKIAEMNT--ELLKQKA 454
+ F ++ + +L + P + E+L L L E N ++ + +LL + A
Sbjct: 564 VFSFGNYGSYRLDEEPPAIIEILEL-LGELSTREPNYAAFEVFANVENRFAAEKLLAEHA 622
Query: 455 EMLEEYFCVKIDTRGN----LSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQA 510
++L +YF +K+D N ++ +P ++ + P ++++P + L +VD++DE+ F+
Sbjct: 623 DLLHDYFAIKLDQLENGRLHITEIPSLVHYFVPQLEKLPFLIATLVLNVDYDDEQNTFRT 682
Query: 511 IAAALGNFYAM 521
I A+G+ + +
Sbjct: 683 ICRAIGDLFTL 693
>UNIPROTKB|Q1RMN2 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0051257 "spindle midzone
assembly involved in meiosis" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0045950 "negative regulation of mitotic
recombination" evidence=IEA] [GO:0045190 "isotype switching"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0001673 "male germ
cell nucleus" evidence=IEA] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 GO:GO:0005524 GO:GO:0008630
GO:GO:0048477 GO:GO:0007283 GO:GO:0016887 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 GO:GO:0045190 GO:GO:0007131
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
PANTHER:PTHR10073 HOGENOM:HOG000176000 OrthoDB:EOG43N7C7
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
GeneTree:ENSGT00550000074923 EMBL:DAAA02053630 EMBL:DAAA02053631
UniGene:Bt.30133 EMBL:BC114810 IPI:IPI00838277 STRING:Q1RMN2
Ensembl:ENSBTAT00000048965 HOVERGEN:HBG083452 InParanoid:Q1RMN2
Uniprot:Q1RMN2
Length = 233
Score = 358 (131.1 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 69/160 (43%), Positives = 106/160 (66%)
Query: 362 SFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLML 421
SF+G + +AL QH T +YL N LS+EL YQ+++ FA+F ++LS+PAPL +L ML
Sbjct: 6 SFVGCVNPQWALAQHQTKLYLLNTTRLSEELFYQILVYDFANFGVLRLSEPAPLFDLAML 65
Query: 422 ALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEMLEEYFCVKIDTRGNLSRLPIILDQY 481
AL + +E D KE +AE E LK+KAEML +YF ++ID GNL LP+++D Y
Sbjct: 66 ALDSPESGW--TEEDGPKEGLAEYIVEFLKKKAEMLADYFSLEIDEEGNLVGLPLLIDNY 123
Query: 482 TPDMDRIPEFVLCLGNDVDWEDEKCCFQAIAAALGNFYAM 521
P ++ +P F+L L +V+W++EK CF++++ FY++
Sbjct: 124 VPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSI 163
>UNIPROTKB|E7EUC9 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0005712 "chiasma" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0007060 "male meiosis chromosome segregation"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0045190 GO:GO:0071407
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
EMBL:AC006583 GO:GO:0005712 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
GO:GO:0032137 GO:GO:0007060 GO:GO:0043060 GO:GO:0051257
IPI:IPI01008784 ProteinModelPortal:E7EUC9 SMR:E7EUC9
Ensembl:ENST00000441265 ArrayExpress:E7EUC9 Bgee:E7EUC9
Uniprot:E7EUC9
Length = 105
Score = 294 (108.6 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 55/105 (52%), Positives = 76/105 (72%)
Query: 150 MDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPE 209
M+GY+SN+NY KK +LF+N RLVE L++A+E VYAA PK + PF+Y+S+ + P+
Sbjct: 1 MNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQ 60
Query: 210 HVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQ 254
+VDVNVHPTK EV L++E I+E++Q +E KL SN SR Y Q
Sbjct: 61 NVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQ 105
>UNIPROTKB|P49850 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U27343
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR ProtClustDB:PRK00095 PIR:A69663 RefSeq:NP_389587.1
PDB:3GAB PDB:3KDG PDB:3KDK PDBsum:3GAB PDBsum:3KDG PDBsum:3KDK
ProteinModelPortal:P49850 SMR:P49850 IntAct:P49850
EnsemblBacteria:EBBACT00000001153 GeneID:939455 KEGG:bsu:BSU17050
PATRIC:18975217 GenoList:BSU17050 BioCyc:BSUB:BSU17050-MONOMER
EvolutionaryTrace:P49850 Uniprot:P49850
Length = 627
Score = 307 (113.1 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 105/403 (26%), Positives = 182/403 (45%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ V H+ +TT T G G ++ + G + SE ++ + KGT+I+V NLF
Sbjct: 93 LGFRGEALPSIASVSHLEITTST-GEGAGTKLVLQGGNIISESRSSSR-KGTEIVVSNLF 150
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+N AR K ++ + I D+++R+A+ H VS R HG + + +
Sbjct: 151 FNTPARLKYMKTVHTELGNITDVVNRIALAHPEVSIRLRHHGKNLLQTNGNGDVRHV--L 208
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAP 179
+YG +VA ++ L S S F++ GY++ A + M VN R ++ P
Sbjct: 209 AAIYGTAVAKKMLPLHVS------SLDFEVKGYIALPEITRASRNYMSSVVNGRYIKNFP 262
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
L +AV Y P P ++ I + P VDVNVHP+K EV L + + + I+ ++
Sbjct: 263 LVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDLIRDGIK 322
Query: 240 LKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAG-- 297
D +K+Q + S P + + + P K V S+ P+
Sbjct: 323 -------D--VFKQQQLIPSAQVPKKSAPAIKNEQQFITFDEKPPEKKVPEKSTAPSYSP 373
Query: 298 -RLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSG--- 353
+L + V+ +P + P L + + E +D+++ Q + ++ CH
Sbjct: 374 MKLSSVVK-EPVDAEEKLPPLQFDAPPIVDQEQTLEVSDVSAEQP--ETFEQECHEEQPQ 430
Query: 354 -LLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQ 395
D V IG Y L Q+ +Y+ + + + + Y+
Sbjct: 431 PASDRVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYE 473
>UNIPROTKB|Q74BP0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 285 (105.4 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/244 (31%), Positives = 122/244 (50%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ V T+ T +G + G + Y +G E KAC +GT + V NLF
Sbjct: 94 LGFRGEALPSVASVSRFTLATRERGSIEGTEI-YAEGGKIREVKACGMAEGTVVSVRNLF 152
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+N AR K +++ + + DL++R+A+ V F+C G + + LD +
Sbjct: 153 FNTPARLKFMKSVETEGGHVADLVTRLALSRPEVRFTCVSDGKT---LFRALDGTLLDRV 209
Query: 121 RTVYGVSVASNLVQLE-ASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 179
+ G +VAS L ++ A+E + V + D VS S + + ++N R +
Sbjct: 210 AALLGKTVASALHPVDLATEGVRVTGLVARPD--VSRS----AASHLYTYINGRFIRDRV 263
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
++ A+ Y + P + + I + P VDVNVHPTK EV Q ++ + IQ AVE
Sbjct: 264 VQHAILQAYRNFLERGRYPVVVLFIEVSPGEVDVNVHPTKHEVRFRQQGIVHDVIQGAVE 323
Query: 240 LKLR 243
LR
Sbjct: 324 ETLR 327
>TIGR_CMR|GSU_2001 [details] [associations]
symbol:GSU_2001 "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 285 (105.4 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 77/244 (31%), Positives = 122/244 (50%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ V T+ T +G + G + Y +G E KAC +GT + V NLF
Sbjct: 94 LGFRGEALPSVASVSRFTLATRERGSIEGTEI-YAEGGKIREVKACGMAEGTVVSVRNLF 152
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+N AR K +++ + + DL++R+A+ V F+C G + + LD +
Sbjct: 153 FNTPARLKFMKSVETEGGHVADLVTRLALSRPEVRFTCVSDGKT---LFRALDGTLLDRV 209
Query: 121 RTVYGVSVASNLVQLE-ASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 179
+ G +VAS L ++ A+E + V + D VS S + + ++N R +
Sbjct: 210 AALLGKTVASALHPVDLATEGVRVTGLVARPD--VSRS----AASHLYTYINGRFIRDRV 263
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
++ A+ Y + P + + I + P VDVNVHPTK EV Q ++ + IQ AVE
Sbjct: 264 VQHAILQAYRNFLERGRYPVVVLFIEVSPGEVDVNVHPTKHEVRFRQQGIVHDVIQGAVE 323
Query: 240 LKLR 243
LR
Sbjct: 324 ETLR 327
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 285 (105.4 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 78/245 (31%), Positives = 119/245 (48%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
MGFRGEALAS+T + V + T L G ++ G ++ A A GT + V+ LF
Sbjct: 97 MGFRGEALASITAIAKVEILTRPPEELTGTKLVIHGGKVQETSDAGTA-PGTSVYVKELF 155
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
YN ARRK L++ + I D ++R+A+ + +SF+ G + + S +S S+
Sbjct: 156 YNTPARRKYLKSDRTELAHITDTVTRLALANPGISFTLLSEG--KPVIRSTGSSDLFKSL 213
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSN-SNYVAKKTTMVLFVNDRLVECAP 179
+ G A +++ LE Y F++ GYVS + +FVN R V
Sbjct: 214 VNLLGPDTARSMLPLE---YRTED---FEIRGYVSKPETNRGGSDQLYVFVNTRPVTSRA 267
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
+ AV Y PK P +++ L PE VDVNVHP K EV ++ + + + AVE
Sbjct: 268 INMAVREGYYTKIPKGRYPVAVLALTLNPEEVDVNVHPRKAEVRFSREKEVGDAVIRAVE 327
Query: 240 LKLRQ 244
L +
Sbjct: 328 KVLSE 332
Score = 45 (20.9 bits), Expect = 5.6e-22, Sum P(2) = 5.6e-22
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 356 DIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLR 399
D++ IG +Y L + + + + + + ++Y+ VLR
Sbjct: 465 DLLEDLRIIGQVSKMYILAEKGEDLVIIDQHAAHERVLYEQVLR 508
>TIGR_CMR|CBU_1083 [details] [associations]
symbol:CBU_1083 "DNA mismatch repair protein MutL"
species:227377 "Coxiella burnetii RSA 493" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_820082.2 ProteinModelPortal:Q83CM9 SMR:Q83CM9
GeneID:1208984 KEGG:cbu:CBU_1083 PATRIC:17930897
BioCyc:CBUR227377:GJ7S-1075-MONOMER Uniprot:Q83CM9
Length = 574
Score = 268 (99.4 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 85/310 (27%), Positives = 148/310 (47%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEALAS++ V +T+T+ K GYR+S + + P A +GT I V++LF
Sbjct: 92 LGFRGEALASISAVSRLTLTSRQKNAEMGYRISNISHKIMT-PVPAAHPQGTTIDVQDLF 150
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVH--SIAT-SSRL 117
YN ARRK L++ + ++ I ++ R+A+ H F H + +H S T S +
Sbjct: 151 YNTPARRKFLRSPATEFQHIRRIIERLALSHFTTEFLL--HHNEKEIIHFKSATTISGQE 208
Query: 118 DSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM-VLFVNDRLVE 176
+ I+++ G + + +E S+ S K GY++ + Y + + ++VN R V
Sbjct: 209 NRIKSILGDVFMQSALAIEFSQ----SGLTLK--GYIAEAAYTRSQPDLQYIYVNGRFVR 262
Query: 177 CAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQS 236
+ +A+ Y P + + + P VD+NVHPTK EV + + + + +
Sbjct: 263 DKLVAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDINVHPTKHEVRFRDPQWVRDFLIH 322
Query: 237 AVELKLRQSNDSRTYK--EQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSD 294
AV+ L Q+ + + T E +P + + P+ + + S +Q+ P
Sbjct: 323 AVKTALAQAKPGIVHPLPQSTAEYNPITNFAPTPLIEGQGNLSLIQEQPAPYTQTIVHKH 382
Query: 295 PAGRLHAYVQ 304
P G HA Q
Sbjct: 383 PLG--HALAQ 390
>TIGR_CMR|BA_3904 [details] [associations]
symbol:BA_3904 "DNA mismatch repair protein MutL"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552
RefSeq:NP_846151.1 RefSeq:YP_020542.1 RefSeq:YP_029870.1
ProteinModelPortal:Q81WR4 IntAct:Q81WR4 DNASU:1085120
EnsemblBacteria:EBBACT00000009631 EnsemblBacteria:EBBACT00000015187
EnsemblBacteria:EBBACT00000021815 GeneID:1085120 GeneID:2814810
GeneID:2848877 KEGG:ban:BA_3904 KEGG:bar:GBAA_3904 KEGG:bat:BAS3617
OMA:FLFINNR ProtClustDB:PRK00095
BioCyc:BANT260799:GJAJ-3676-MONOMER
BioCyc:BANT261594:GJ7F-3793-MONOMER Uniprot:Q81WR4
Length = 626
Score = 268 (99.4 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 85/265 (32%), Positives = 130/265 (49%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ V + + T T G G + + G + + K A+ KGT I V+NLF
Sbjct: 93 LGFRGEALPSIASVSELELITST-GDAPGTHLIIKGGDIIKQEKT-ASRKGTDITVQNLF 150
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+N AR K ++ + I D++ R+A+ H VS H + +H+ +
Sbjct: 151 FNTPARLKYMKTIHTELGNITDIVYRIAMSHPEVSLKLF-HNEKKL-LHTSGNGDVRQVL 208
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAP 179
++Y + VA LV +EA +S F K GYV+ A + M VN R V
Sbjct: 209 ASIYSIQVAKKLVPIEA----ESLDFTIK--GYVTLPEVTRASRNYMSTIVNGRYVRNFV 262
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQE----LIVEKIQ 235
L +A++ Y P P ++SI + P VDVNVHP K EV ++ LI E +Q
Sbjct: 263 LMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQ 322
Query: 236 SAVELKLRQSNDS--RTYKEQTVES 258
+A + K++ D+ T K++ ES
Sbjct: 323 AAFK-KIQLIPDAGVTTKKKEKDES 346
>UNIPROTKB|Q8A120 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:226186 "Bacteroides thetaiotaomicron VPI-5482" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE015928 GenomeReviews:AE015928_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
RefSeq:NP_812762.1 ProteinModelPortal:Q8A120 GeneID:1072957
KEGG:bth:BT_3851 PATRIC:21062728 OMA:EEFGNNS ProtClustDB:CLSK823666
BioCyc:BTHE226186:GJXV-3925-MONOMER Uniprot:Q8A120
Length = 640
Score = 260 (96.6 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 68/243 (27%), Positives = 123/243 (50%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
MGFRGEALAS+ V V + T + G ++ +ES+ +A + KG+ V+NLF
Sbjct: 94 MGFRGEALASIAAVAQVELKTRLESEELGTKLVIAGSKVESQ-EAVSCSKGSNFSVKNLF 152
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+N+ ARRK L+ +S + + I+ R+A+ H V+FS + + ++ ++ S I
Sbjct: 153 FNVPARRKFLKANSTELSNILAEFERIALVHPEVAFSLYSNDS---ELFNLPVSPLRQRI 209
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTT-MVLFVNDRLVECAP 179
++G + L+ +E + + + K+ GY++ KK FVN R +
Sbjct: 210 LAIFGKKLNQQLLNIEVN------TTMVKISGYIAKPETARKKGAHQYFFVNGRYMRHPY 263
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
+AV Y P + ++ + P ++DVN+HPTK E+ N++ I + + ++V+
Sbjct: 264 FHKAVMEAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILSASVK 323
Query: 240 LKL 242
L
Sbjct: 324 ESL 326
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 253 (94.1 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 89/344 (25%), Positives = 164/344 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHL-HGYRVSY-RDGVMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ VG V ++T T+ G +++ +G ++ + +GT +MV +L
Sbjct: 94 GFRGEALSSLCAVGQVIISTATQNEAPKGVQLNLDHEGSLKDK-LTIPFQRGTSVMVNDL 152
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
F + RRK L+ N +++K + LL A TN F + ++T+S D
Sbjct: 153 FCTLPVRRKLLEKNYKREFSKAISLLQAYATISTNKRFMVYHQTKNSGKLLQLSTNSNKD 212
Query: 119 ---SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTT---MVLFVND 172
+I V+G V+S+L+ +ND ++GY+S + + + + +LF+N
Sbjct: 213 MKLNIMNVFGTKVSSSLIP-----WNDGI-----IEGYISRPHVGSTRASNERQMLFINR 262
Query: 173 RLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVE 232
RLV + R ++ V+ + A PF +++ + +D+NV P K+ V L ++ I+E
Sbjct: 263 RLVNLPKIARVIQEVFKP-YSMAQSPFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIE 321
Query: 233 KIQSAVELKLRQSNDSRTY-KEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTD 291
I+++++ + + + Q++ S S + S D + Q +P + +D
Sbjct: 322 FIKNSLQNLCESCGHAISCSRSQSIFSYSSQIPDSSGD---STDQELPQSIPATESETSD 378
Query: 292 SSD------PAGR--LHAYVQSKPHTSVASGPNLSAVRSSVRQR 327
S P R + A Q TSVA G +L+ V + +R
Sbjct: 379 DSSFSYKRSPCKRKLVEATAQPAISTSVAEGASLAQVSKPLPER 422
>TIGR_CMR|DET_1195 [details] [associations]
symbol:DET_1195 "DNA mismatch repair protein, MutL/HexB
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552 OMA:FLFINNR
RefSeq:YP_181908.1 ProteinModelPortal:Q3Z791 STRING:Q3Z791
GeneID:3229520 KEGG:det:DET1195 PATRIC:21609425
ProtClustDB:CLSK935583 BioCyc:DETH243164:GJNF-1196-MONOMER
Uniprot:Q3Z791
Length = 566
Score = 250 (93.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 92/353 (26%), Positives = 154/353 (43%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ V + + T + G +S G M + A GT I + LF
Sbjct: 92 LGFRGEALPSIAAVADLEMLTAARTEESGTYLSLSGGEMVKHTRM-ARSPGTTIKLTRLF 150
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+ AR K L+ + +K+ +++ A+ + V F+ G R +++ D++
Sbjct: 151 SRVPARLKFLKTPQHEASKVSEVVLSYALAYPEVKFTLSIDG--RNTLNTPGNGKLRDAV 208
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAP 179
+YG VAS ++ LE Y S+ + G VS + + ++ FVN RL++
Sbjct: 209 LEIYGNDVASKMLDLETDSYRSSA---INISGLVSPPEISRSNRNSLHFFVNRRLIQSRA 265
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVE 239
L++A E Y+ P ++I L VDVN+HPTK EV ++ + +Q AV
Sbjct: 266 LQKAAEQAYSGLLMVGRYPLGVINIWLDGALVDVNIHPTKAEVKFSDESAVFTAVQRAVR 325
Query: 240 LKLRQSNDS-RTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKV-PVNKMVRTDSSDPAG 297
L + + +E +V S+ P P+G+ Q PV + +T S P
Sbjct: 326 SVLVEKPPTPHIAEEASVYRQESARQEPIWGETPKPAGTVQQYFSPVIQSAKT-SVLPLL 384
Query: 298 RLHAYVQSKPHTSVASGPN------LSAVRSSVRQRRNLNETADLTSIQELID 344
RL + +A GP+ A +R ++T + Q L+D
Sbjct: 385 RLVGQIGGL--YLLAEGPDGLYIIDQHAAHERIRYEEIASQTPSENARQSLLD 435
>TIGR_CMR|SO_0601 [details] [associations]
symbol:SO_0601 "DNA mismatch repair protein MutL"
species:211586 "Shewanella oneidensis MR-1" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:NP_716234.1
ProteinModelPortal:Q8EJ70 SMR:Q8EJ70 GeneID:1168468
KEGG:son:SO_0601 PATRIC:23520892 OMA:FTHIDEW Uniprot:Q8EJ70
Length = 631
Score = 249 (92.7 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 98/344 (28%), Positives = 163/344 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-MESEPKACAAVKGTQIMVENLF 60
GFRGEALAS++ V +T+T+ T ++ +Y +GV M + A G+ I V +LF
Sbjct: 93 GFRGEALASISSVSRLTLTSRTAEQSEAWQ-AYAEGVEMAVKVMPAAHPVGSTIEVVDLF 151
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR-LDS 119
+N ARR+ L++ ++T I + L R+A+ ++ F+ +G + + L
Sbjct: 152 FNTPARRRFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQR 211
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAP 179
+ V G A +++E +++D ++ GY+ + T +VN RLV
Sbjct: 212 LTQVAGRPFADEALRVEC-QHDD-----LRLSGYLQSPWSTVLTDTHYFYVNGRLVRDRL 265
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV----SLLNQELIVEKIQ 235
+ AV +A + +P + + + P VDVNVHP K EV S + I++ +Q
Sbjct: 266 VNHAVRQAFAQK-AEVEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYILQALQ 324
Query: 236 SAVEL--KLR------QSNDSRTYKEQTVESSP---SSPYNPSKDLHLNPSGSKLQKVPV 284
SA+E +LR Q +DS Y + ESS S + +K L ++ +G + +
Sbjct: 325 SALEEAGELRFEPHSPQIDDSSPYVKPETESSAFELQSTESNAKYLGIDTTGERQAEA-- 382
Query: 285 NKMVRTDSSD-PAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQR 327
++V SSD P R VQS S+ S P + SS R
Sbjct: 383 -RVVEYRSSDMPKMRTGTAVQSNAFGSM-SVPRETRSGSSGESR 424
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 244 (91.0 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 70/247 (28%), Positives = 117/247 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEAL S+ V +++ + +G +GY + G + + + A GT + V +LF+
Sbjct: 94 GFRGEALYSIAAVSKISIKSRVRGENNGYELIAHAGEVINLTEVGMAY-GTVVTVSDLFF 152
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N AR+K L++ + I + +MAI + V FS G + S +L +
Sbjct: 153 NTPARKKFLKSGQTEAGLIRQFIEKMAILYPGVKFSLFIDG--KKIYSSAGIQEQLGLLA 210
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLK 181
+G+ NL+ LE F K G + V VN RLV+ L
Sbjct: 211 RFWGLE-KGNLLMLEEKL---GEGFFIK-GGIALPPAGKPHRKLQVFAVNKRLVKSGILT 265
Query: 182 RAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELK 241
+A++ Y + P KP +++ +V+P VDVNVHP K EV ++++ I +++ + K
Sbjct: 266 KAIDDAYESLLPTGLKPLVFLEVVVPGTWVDVNVHPQKLEVKFMDEQKIYLDVRTIIRNK 325
Query: 242 LRQSNDS 248
L + S
Sbjct: 326 LVNAKSS 332
>UNIPROTKB|Q8F6X4 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:189518 "Leptospira interrogans serovar Lai str. 56601"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 EMBL:AE010300
GenomeReviews:AE010300_GR KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR RefSeq:NP_711356.2 ProteinModelPortal:Q8F6X4
PaxDb:Q8F6X4 GeneID:1150518 KEGG:lil:LA_1175 PATRIC:22383195
ProtClustDB:CLSK573800 BioCyc:LINT189518:GJBB-947-MONOMER
Uniprot:Q8F6X4
Length = 593
Score = 238 (88.8 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 80/302 (26%), Positives = 145/302 (48%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+ V +T+ + TK ++ G + SE + GT+I+VE LF+
Sbjct: 94 GFRGEALASIASVSRLTLESGTKEQKTAWKTRSVAGKI-SEKEEIPGFIGTKILVEELFF 152
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIAT-SSRLDSI 120
N RRK L++ + KI D ++ A+ +V F + G +V + T ++ + I
Sbjct: 153 NTPVRRKFLKSIRSEDKKIRDRVTTQALAREDVRFRLFQDGK---EVFVLPTRENKKERI 209
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSN-YVAKKTTMVLFVNDRLVECAP 179
++G + +L+++ ++ GY+S+ + Y + +T +F+N R +E
Sbjct: 210 IDLFGENFRDHLLEVSLERGGIQAT------GYISDPDFYKSNRTGQFIFINGRPIEIKY 263
Query: 180 LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQE--------LIV 231
++ Y P P+ ++ + P VDVNVHP KRE+ L+++ LI
Sbjct: 264 SSVLLKKAYDELLPPNGHPYCFLFFEIDPSRVDVNVHPAKREIRFLDEDGFNGFFLALIQ 323
Query: 232 EKIQSA-----VELKLRQSNDS-RTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVN 285
++++S+ +ELK R + T+ + + SS NP L SK + ++
Sbjct: 324 KELRSSTPVSFLELKKRLLKPAPETHSTTSFYQARSSGKNPLLGRELFSGVSKQEGFELD 383
Query: 286 KM 287
+M
Sbjct: 384 RM 385
>UNIPROTKB|C9JZ54 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
IPI:IPI00783078 ProteinModelPortal:C9JZ54 SMR:C9JZ54 STRING:C9JZ54
Ensembl:ENST00000429117 ArrayExpress:C9JZ54 Bgee:C9JZ54
Uniprot:C9JZ54
Length = 83
Score = 213 (80.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 41/79 (51%), Positives = 58/79 (73%)
Query: 6 EALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFYNMIA 65
EALAS+++V HVT+TT T YR SY DG +++ PK CA +GTQI VE+LFYN+
Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63
Query: 66 RRKTLQNSSDDYTKIVDLL 84
RRK L+N S++Y KI++++
Sbjct: 64 RRKALKNPSEEYGKILEVV 82
>UNIPROTKB|Q48P04 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 ProtClustDB:PRK00095
HOGENOM:HOG000256551 OMA:ATMACHA RefSeq:YP_272865.1
ProteinModelPortal:Q48P04 SMR:Q48P04 STRING:Q48P04 GeneID:3560497
KEGG:psp:PSPPH_0563 PATRIC:19970177 Uniprot:Q48P04
Length = 648
Score = 235 (87.8 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 101/442 (22%), Positives = 185/442 (41%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEALAS++ V +T+T+ T+ ++V M + A GT + V +LF
Sbjct: 112 LGFRGEALASISSVARLTLTSRTRDADQAWQVETEGRDMAPRVQPAAHPVGTSVEVRDLF 171
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIAT-SSRLDS 119
+N ARRK L+ ++ + +++ RMA+ +V+F R +G +H ++R
Sbjct: 172 FNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNGKTMLSLHEAHDDTARARR 231
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM-VLFVNDRLVECA 178
+ + G + +E E N + G+V + + + FVN R V
Sbjct: 232 VSAICGPGFLEQALPIEI-ERNG-----LHLWGWVGLPTFSRSQADLQYFFVNGRAVRDK 285
Query: 179 PLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
+ AV Y P + + P VDVNVHPTK EV + ++ + + +
Sbjct: 286 LVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVNVHPTKHEVRFRDGRMVHDFLYGTL 345
Query: 239 ELKL---RQSNDSRTYKEQTVESSPSSP----YNPSKDLHLNPSGSKLQKVPVNKMVRTD 291
L R N E P+ P + P ++ L + + L++ R
Sbjct: 346 HRALGDVRPENQLGGSVPVAAEPRPTGPEAGEFGPQGEMRL--ANNVLEQPQGEPFARPA 403
Query: 292 SSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCH 351
+ AG + Y Q P + SG ++ +S+ R+ +A +S+ E D+ +
Sbjct: 404 AGGGAGSGYQY-QYTPRPT--SGVPVAEAQSAYREFFAPLPSAASSSLPESPGDIPPLGY 460
Query: 352 SGLLDIVRHCSFIGMADDVYALLQHNTH-MYLANVVSLSKELMYQLVLRRFAHFNAIQLS 410
+ + +Y +L N H + L ++ + + +MY+ + + A N
Sbjct: 461 A-----------LAQLKGIY-ILAENAHGLVLVDMHAAHERIMYERL--KIAMANEGLSG 506
Query: 411 DPAPLSELLMLALKEEDLDVEN 432
P + E L ++ +E D E+
Sbjct: 507 QPLLVPESLAVSQREADCAEEH 528
>UNIPROTKB|Q89DE6 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224911 "Bradyrhizobium japonicum USDA 110" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 EMBL:BA000040
GenomeReviews:BA000040_GR HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_774133.1 ProteinModelPortal:Q89DE6 GeneID:1054324
KEGG:bja:blr7493 PATRIC:21198969
BioCyc:BJAP224911:GJEJ-7548-MONOMER Uniprot:Q89DE6
Length = 603
Score = 233 (87.1 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ V +++TT G H + ++ G +SE A GT++ V +LF
Sbjct: 91 LGFRGEALPSIGSVARLSITTRHAGEPHAWALTVEGGE-KSEIMPAALAHGTRVEVNDLF 149
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIAT----SSR 116
Y AR K L+ + I +++ R+A+ +V+F+ G RA V A + R
Sbjct: 150 YATPARLKFLKTDRTEAEAIREVVRRLAMARPDVAFTLA--GEERAPVTWAAALPGAAGR 207
Query: 117 LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLV 175
L + + G S+ +++ A + V + GY + A LFVN R V
Sbjct: 208 LTRLGDILGAEFRSHAIEVHA----EREGIV--VSGYAAAPALTKANALGQYLFVNGRPV 261
Query: 176 ECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ 235
+ AV Y+ P+ P + + + L P VD NVHP K EV N L+ I
Sbjct: 262 RDKLILGAVRAAYSDYLPRDRHPVLALFVTLDPREVDANVHPAKTEVRFRNAGLVRALIV 321
Query: 236 SAVELKLRQSNDSRTYKEQTVESSPSSPYNPS 267
LK + + R + ES+ SS + P+
Sbjct: 322 HG--LKEALAREGRRTAANSGESALSS-FRPA 350
>TIGR_CMR|CPS_0323 [details] [associations]
symbol:CPS_0323 "DNA mismatch repair protein MutL"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
RefSeq:YP_267089.1 ProteinModelPortal:Q48A24 SMR:Q48A24
STRING:Q48A24 GeneID:3521200 KEGG:cps:CPS_0323 PATRIC:21464033
HOGENOM:HOG000256551 OMA:RMASTHA BioCyc:CPSY167879:GI48-426-MONOMER
Uniprot:Q48A24
Length = 652
Score = 232 (86.7 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 107/462 (23%), Positives = 189/462 (40%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEALAS++ V +T+T+ + ++ M K A GT I V +LF
Sbjct: 92 LGFRGEALASISSVARLTLTSKPQSQATAWQAVAEGRDMSVNIKPAAHPDGTSIEVLDLF 151
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR-LDS 119
+N ARRK L+ ++ I +++ R+A+ H VSFS +G +T ++ +
Sbjct: 152 FNTPARRKFLRTEKTEFNHIDEVVRRIALAHFEVSFSLTHNGNTVRQYRMASTHAQCIKR 211
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVL-FVNDRLVECA 178
+ V G + V+++ N + G+++ ++ + + +VN R++
Sbjct: 212 VAMVCGPKFIEHAVEVDCPHDN------MTLSGWLAKPSFSRSQNDLCYSYVNGRMMRDK 265
Query: 179 PLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
+ A+ YA P + P + + L VDVNVHP+K EV + + I S
Sbjct: 266 LINHAIRQAYADLLPPDTYPAFVLFLQLDHREVDVNVHPSKHEVRFHQSRYVHDFIYSVC 325
Query: 239 ELKLRQS---NDSRTYKEQTVESSPSSPYNPSKDLHLNP-SGSKLQKVPVNKMVRTDSSD 294
L + + T + + P Y+ L N GS P D
Sbjct: 326 HKALTSALAGEELFTTADSDLALVPEQSYS---SLGANDRQGSHSSNTPTLNYPSADYIR 382
Query: 295 PAGRLHAYVQSKPHTSVASG------PN-LSAVRSSVRQRRNLNETADLTSIQELI--DD 345
P ++ S+ TS SG N +S + +S Q + +Q D
Sbjct: 383 PLQHVNDASNSQS-TSSYSGYGQQHKTNAISKIAASNYQALMTPDKGSSAQVQNTSGSDQ 441
Query: 346 VDRNCH--SGLLDIVRHCSFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAH 403
H + L + +F+ + YAL + + + ++ L+K +LV + +
Sbjct: 442 ASAQKHETTTLQNSTDQSAFLSVHQPGYALYKTENGVRVLSLFKLAKSTYGKLVEQSWQ- 500
Query: 404 FNAIQLSD-PA------PLSELLMLALKEEDLDVENSENDDL 438
N + SD P PL ++L+L E+ L +E + L
Sbjct: 501 -NKTEQSDCPVECLVSQPLLLPVILSLSEQQLSFVLAEQEIL 541
>TIGR_CMR|VC_0345 [details] [associations]
symbol:VC_0345 "DNA mismatch repair protein MutL"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 PIR:A82334 RefSeq:NP_229999.1
ProteinModelPortal:Q9KV13 SMR:Q9KV13 DNASU:2615058 GeneID:2615058
KEGG:vch:VC0345 PATRIC:20079763 OMA:YAEGRDQ Uniprot:Q9KV13
Length = 653
Score = 229 (85.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 68/247 (27%), Positives = 118/247 (47%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-MESEPKACAAVKGTQIMVENL 59
+GFRGEALAS++ V +T+T+ T + +Y +G M + + A GT + V +L
Sbjct: 92 LGFRGEALASISSVSRLTLTSRTVAQEEAWS-AYSEGRDMAVKLQPAAHPVGTTVEVLDL 150
Query: 60 FYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDS 119
F+N ARRK L+ ++T I +LL R+A+ +VSF+ R +G + T + +
Sbjct: 151 FFNTPARRKFLRTEKTEFTHIDELLKRIALSRFDVSFTLRHNGKIVRQYRAATTLPQQEK 210
Query: 120 -IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM-VLFVNDRLVEC 177
+ V G +++++E K+ G+++ +++ + +VN R++
Sbjct: 211 RLAAVCGNPFVQHMLRIELEHQG------LKLHGWITTPEGARQQSDLQYCYVNGRMMRD 264
Query: 178 APLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSA 237
+ A+ Y + + I L P VDVNVHP K EV L+ + I A
Sbjct: 265 KLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDVNVHPAKHEVRFHQARLVHDFIYQA 324
Query: 238 VELKLRQ 244
+ L Q
Sbjct: 325 LSSALVQ 331
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 230 (86.0 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 87/324 (26%), Positives = 147/324 (45%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ +G +TV T TK G R+ + GV+ E K V GT + VE LF
Sbjct: 99 GFRGEALSSLCALGKLTVETRTKDEPVGTRLEFAHSGVVTGERKMARPV-GTAVTVEKLF 157
Query: 61 YNMIARRKTL-QNSSDDYTKIVDLLSRMAIHHTNVSFSCRK---HGAARADVHSIATSSR 116
+ R K +N +Y K++ LL+ A+ V C + A + + +SS
Sbjct: 158 STLPVRSKEFSRNIRKEYGKVISLLNAYALIAKGVRLVCTNTVGKNSKSAVLRTQGSSSL 217
Query: 117 LDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTT---MVLFVNDR 173
D+I TV+G++ L +N + S ++DG++S + + + +VN R
Sbjct: 218 KDNIITVFGLNTFKCL-----QPFNVTISEGCQVDGFLSKPGPGSGRNSGDRQFFYVNGR 272
Query: 174 LVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEK 233
V+ + + V +Y ++ K P ++ +P DVNV P KR++ ++ I+
Sbjct: 273 PVDMPKVSKLVNELYRSSNAK-QYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLS 331
Query: 234 IQSAVE-LKLRQ--SNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRT 290
++ +E L Q S + ++ E P+ +D+ L + + M T
Sbjct: 332 LREGIENLYCPQQCSFSINSVEDPGKEMDPAID-GSDEDMCLTEKENVSAPENDDDMDET 390
Query: 291 DSSDPAGRLHAYVQSKPHTSVASG 314
DS D + V S T VA+G
Sbjct: 391 DSDDEVTPENQKVPSSVTTRVATG 414
>UNIPROTKB|P23367 [details] [associations]
symbol:mutL species:83333 "Escherichia coli K-12"
[GO:0006298 "mismatch repair" evidence=IEA;IDA;IMP] [GO:0005524
"ATP binding" evidence=IEA;IDA] [GO:0032300 "mismatch repair
complex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000018 "regulation of DNA recombination" evidence=IMP]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 EMBL:U14003
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:L19346 EMBL:Z11831
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000018 eggNOG:COG0323
EMBL:M63655 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 HOGENOM:HOG000256551
PIR:PH0853 RefSeq:NP_418591.1 RefSeq:YP_492312.1 PDB:1B62 PDB:1B63
PDB:1BKN PDB:1NHH PDB:1NHI PDB:1NHJ PDB:1X9Z PDBsum:1B62
PDBsum:1B63 PDBsum:1BKN PDBsum:1NHH PDBsum:1NHI PDBsum:1NHJ
PDBsum:1X9Z ProteinModelPortal:P23367 SMR:P23367 DIP:DIP-10285N
IntAct:P23367 MINT:MINT-1266937 PRIDE:P23367
EnsemblBacteria:EBESCT00000002603 EnsemblBacteria:EBESCT00000002604
EnsemblBacteria:EBESCT00000002605 EnsemblBacteria:EBESCT00000017847
GeneID:12934482 GeneID:948691 KEGG:ecj:Y75_p4056 KEGG:eco:b4170
PATRIC:32123913 EchoBASE:EB1258 EcoGene:EG11281 OMA:FSHIDEI
BioCyc:EcoCyc:EG11281-MONOMER BioCyc:ECOL316407:JW4128-MONOMER
BioCyc:MetaCyc:EG11281-MONOMER EvolutionaryTrace:P23367
Genevestigator:P23367 Uniprot:P23367
Length = 615
Score = 216 (81.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 68/269 (25%), Positives = 123/269 (45%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGV-MESEPKACAAVKGTQIMVENL 59
+GFRGEALAS++ V +T+T+ T ++ +Y +G M K A GT + V +L
Sbjct: 92 LGFRGEALASISSVSRLTLTSRTAEQQEAWQ-AYAEGRDMNVTVKPAAHPVGTTLEVLDL 150
Query: 60 FYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDS 119
FYN ARRK L+ ++ I +++ R+A+ +V+ + +G ++ + +
Sbjct: 151 FYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKE- 209
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMV--LFVNDRLVEC 177
R + + + L Q A E+ + G+V++ N+ + +VN R++
Sbjct: 210 -RRLGAICGTAFLEQALAIEWQHGD---LTLRGWVADPNHTTPALAEIQYCYVNGRMMRD 265
Query: 178 APLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSA 237
+ A+ +P + + + P VDVNVHP K EV L+ + I
Sbjct: 266 RLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQG 325
Query: 238 VELKLRQSNDSRTYKEQTVESSPSS-PYN 265
V L+Q ++ + + +P S P N
Sbjct: 326 VLSVLQQQLETPLPLDDEPQPAPRSIPEN 354
>UNIPROTKB|A6VD59 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:381754 "Pseudomonas aeruginosa PA7" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:YP_001350994.1
ProteinModelPortal:A6VD59 SMR:A6VD59 STRING:A6VD59 GeneID:5355304
KEGG:pap:PSPA7_5675 PATRIC:19832835
BioCyc:PAER381754:GHMY-5681-MONOMER Uniprot:A6VD59
Length = 633
Score = 215 (80.7 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 63/232 (27%), Positives = 106/232 (45%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEALAS++ V +T+T+ T ++V M+ + A GT + V +LF
Sbjct: 96 LGFRGEALASISSVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLF 155
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS-SRLDS 119
+N ARRK L+ ++ + +++ R+A+ +V+F R +G +H +R
Sbjct: 156 FNTPARRKFLRAEKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARR 215
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLF-VNDRLVECA 178
+ V G + + +E E N + G+V + + + F VN R+V
Sbjct: 216 VGAVCGQAFLEQALPIEV-ERNG-----LHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDK 269
Query: 179 PLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELI 230
+ AV Y P + + P VDVNVHPTK EV + ++
Sbjct: 270 LVAHAVRQAYRDVLYNGRHPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMV 321
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 161 (61.7 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 45/159 (28%), Positives = 85/159 (53%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ + + +TT TK + R+ + ++G ++++ V GT + + NLF
Sbjct: 92 GFRGEALSSLCSLSNCIITTRTKNQVTAQRLVFDKEGKIQTQTPVAREV-GTTVQLSNLF 150
Query: 61 YNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHG--AARADVHSIATSSRL 117
+ R + + N +Y K++ +L A+ TN +C + R+ V S + S +
Sbjct: 151 KGLPVRYQEFKRNIKKEYAKLLTILQAYALISTNTRITCYNQAGKSPRSCVLSTTSGSTI 210
Query: 118 -DSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVS 155
D++ V+G ++ +L + AS DS +FK++G +S
Sbjct: 211 RDNLINVFGTKMSQSLDEFTAS---DS---LFKVNGLIS 243
Score = 108 (43.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 44/206 (21%), Positives = 92/206 (44%)
Query: 134 QLEASEYNDSSSFVFKMD-GYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATF 192
QL +S + SSS ++ G +S S A + FVN R E + L + + +Y +
Sbjct: 268 QLSSSSSSSSSSQSSQLSIGSLSRS--CADR--QFFFVNSRPFEHSKLAKEINSLYQSFH 323
Query: 193 PKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYK 252
+ S P + +I +P + DVNV P KR + + ++ ++ I LK +
Sbjct: 324 KRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDG--LKTMWETAQSVFD 381
Query: 253 EQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVA 312
+ + N + + + N SK+ P ++T+ + ++ + K H++
Sbjct: 382 TNQLGQFTFNDENENDNSNNNKQ-SKISSFPNLYTLKTEEDENNNKITTPI--KKHSTTT 438
Query: 313 SGPNLSAVRSSVRQRRNLNETADLTS 338
+ +L++ S+ +++ N T+ +S
Sbjct: 439 TTSSLNSPSSN---KKSSNSTSSSSS 461
Score = 46 (21.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 34/142 (23%), Positives = 55/142 (38%)
Query: 213 VNVHPTKREVSLLNQELIVEKIQSAVELKLRQSN-DSRTYKEQTVESS----PSSPYNPS 267
+ H T S LN +K ++ +N ++R E+ + S P +
Sbjct: 431 IKKHSTTTTTSSLNSPSSNKKSSNSTSSSSSSNNKNNRNNLEEDGDDSFDITDQQPLKRA 490
Query: 268 K-DLHLNPSGSK--LQKVPV-NKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSS 323
K D + N S K L K P NK ++ D YVQ P V S+
Sbjct: 491 KYDGNYNNSNKKPELPKTPYPNKKKNNENEDEDEDEDNYVQ----------P----VFSN 536
Query: 324 VRQRRNLNETADLTSIQELIDD 345
V + +N + + S+ ++IDD
Sbjct: 537 VNKSKNSSNSGSSNSLDDIIDD 558
>TIGR_CMR|NSE_0609 [details] [associations]
symbol:NSE_0609 "DNA mismatch repair protein, MutL/HexB
family" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
RefSeq:YP_506489.1 ProteinModelPortal:Q2GDF7 STRING:Q2GDF7
GeneID:3931746 KEGG:nse:NSE_0609 PATRIC:22681251
ProtClustDB:CLSK2527761 BioCyc:NSEN222891:GHFU-625-MONOMER
Uniprot:Q2GDF7
Length = 652
Score = 214 (80.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 63/259 (24%), Positives = 122/259 (47%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL S+ + + + G GY + + ++ C GT + V LF
Sbjct: 91 LGFRGEALHSIAITSEMKIASCFNGE--GYVIDAQTKEVKPHHIKC----GTLVEVRKLF 144
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+N+ + + L++ + + I++LL+R+A+ + N++F +G D + R++ +
Sbjct: 145 HNIPNKLRFLRSEKTELSSIIELLNRLALVNPNIAFELISNGRQVFDYQTATQLKRMEQL 204
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPL 180
+ V G N++ ++ + ND +F + ++ K+ ++FVN R V+ + +
Sbjct: 205 K-VLGKEFVENMIHVKHT--NDG---IFG-ELFLGLPTLTQKRNNCLIFVNGRPVKDSVI 257
Query: 181 KRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVEL 240
+ Y PK + P + I + VDVN+HP K EV + ++I + S
Sbjct: 258 SSVMRHAYNDYIPKNTYPIAVIFIRVHNNEVDVNIHPNKSEVKFRDPQVIRRFLLSVSSR 317
Query: 241 KLRQS--NDSRTYKEQTVE 257
L Q + S T ++ VE
Sbjct: 318 SLLQCGRSTSTTVADRAVE 336
>TIGR_CMR|ECH_0884 [details] [associations]
symbol:ECH_0884 "DNA mismatch repair protein, MutL/HexB
family" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 RefSeq:YP_507679.1 ProteinModelPortal:Q2GFV4
STRING:Q2GFV4 GeneID:3927913 KEGG:ech:ECH_0884 PATRIC:20577170
BioCyc:ECHA205920:GJNR-887-MONOMER Uniprot:Q2GFV4
Length = 673
Score = 205 (77.2 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 62/241 (25%), Positives = 112/241 (46%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGE L S+ VG V + + + + + + G E A GT I V +LF
Sbjct: 91 LGFRGEGLTSIAAVGKVKMVSKYRDSDTAWLMVFEGGEKTQELTPDALSCGTYIEVRDLF 150
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCR-KHGAARADVHSIATSSRLDS 119
+ R K L+ + I+D+++++A+ + NV FS + + + RL
Sbjct: 151 FATPNRLKFLRTEKAEVQSIIDMMNKLAMVNHNVMFSLFVDNKQVFKYLTQQSNIDRLSE 210
Query: 120 IRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVL-FVNDRLVECA 178
I+T+ G+ N + + E ++ GY+ + K++++ FVN R V
Sbjct: 211 IKTL-GMEFCKNSLPVNVKEEQ------IQLSGYIGSPTLSRGKSSLIYTFVNSRPVYDN 263
Query: 179 PLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
L AV Y+ K P + + + +P + VD NVHP K EV +++L+ + +A+
Sbjct: 264 LLIGAVRYAYSDFIEKDKYPVVVLYLDIPCDQVDANVHPNKSEVRFQDKKLVYRTVVNAI 323
Query: 239 E 239
+
Sbjct: 324 K 324
Score = 54 (24.1 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 530 SGEGLQCYKKRKPLKNPVDIERY 552
S E +C++ RKPL N D+++Y
Sbjct: 362 SSEFFKCFQNRKPLLNN-DVQKY 383
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 73/269 (27%), Positives = 122/269 (45%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ +G++TV T TK +++ G++ +E K + GT + V LF
Sbjct: 107 GFRGEALSSLCALGNLTVETRTKNEPVATLLTFDHSGLLTAEKKTARQI-GTTVTVRKLF 165
Query: 61 YNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR--- 116
N+ R K + N +Y K+V LL+ A+ V F C + T R
Sbjct: 166 SNLPVRSKEFKRNIRKEYGKLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSL 225
Query: 117 LDSIRTVYGVSVASNL--VQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRL 174
D+I TV+G+S ++L V + SE F+ K G + N ++ F+N R
Sbjct: 226 KDNIITVFGISTFTSLQPVSICVSEDCRVEGFLSK-PGQGTGRNLADRQ---YFFINGRP 281
Query: 175 VECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKI 234
V+ + + V +Y T + P + ++P D+NV P KR+V ++ ++ +
Sbjct: 282 VDMPKVSKLVNELYKDTSSR-KYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSL 340
Query: 235 QSAVELKLRQSNDSRTYKEQTVESSPSSP 263
+ + SN S Y E + P
Sbjct: 341 REGLNEIYSSSNAS--YIVNRFEENSEQP 367
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 213 (80.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/278 (26%), Positives = 125/278 (44%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ + +TT R+ + + + A KGT VE+LF
Sbjct: 89 GFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKTEVVAGQKGTVASVESLF 148
Query: 61 YNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR--- 116
+ RR+ L+ N +Y K+++LL A T V F+ K+ A+ V AT+
Sbjct: 149 RKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTI-KNTQAKKTVVVFATNGNPTT 207
Query: 117 LDSIRTVYGVSVASNLVQL-----------EASEYNDSSSFVFKMDGYVSNSNYVAKKTT 165
++I VYG L+ L E D S + ++ G++S + + T
Sbjct: 208 KENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNI-QVRGHISRPVFGEGRQT 266
Query: 166 ---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV 222
+LFVN R + +A+ VY + F A PF++ + DVNV P KR +
Sbjct: 267 PDRQMLFVNSRPCALPQITKAINEVYKS-FNLAQSPFVFADFHMDTNAYDVNVSPDKRTI 325
Query: 223 SLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP 260
L + ++E ++ +++ KL +S D + Q + P
Sbjct: 326 LLHDAGALIESLKQSLQ-KLFESADQTVPQSQILGKLP 362
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 213 (80.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/278 (26%), Positives = 125/278 (44%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ + +TT R+ + + + A KGT VE+LF
Sbjct: 89 GFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKTEVVAGQKGTVASVESLF 148
Query: 61 YNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR--- 116
+ RR+ L+ N +Y K+++LL A T V F+ K+ A+ V AT+
Sbjct: 149 RKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTI-KNTQAKKTVVVFATNGNPTT 207
Query: 117 LDSIRTVYGVSVASNLVQL-----------EASEYNDSSSFVFKMDGYVSNSNYVAKKTT 165
++I VYG L+ L E D S + ++ G++S + + T
Sbjct: 208 KENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNI-QVRGHISRPVFGEGRQT 266
Query: 166 ---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV 222
+LFVN R + +A+ VY + F A PF++ + DVNV P KR +
Sbjct: 267 PDRQMLFVNSRPCALPQITKAINEVYKS-FNLAQSPFVFADFHMDTNAYDVNVSPDKRTI 325
Query: 223 SLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP 260
L + ++E ++ +++ KL +S D + Q + P
Sbjct: 326 LLHDAGALIESLKQSLQ-KLFESADQTVPQSQILGKLP 362
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 213 (80.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/278 (26%), Positives = 125/278 (44%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ + +TT R+ + + + A KGT VE+LF
Sbjct: 89 GFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKTEVVAGQKGTVASVESLF 148
Query: 61 YNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR--- 116
+ RR+ L+ N +Y K+++LL A T V F+ K+ A+ V AT+
Sbjct: 149 RKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTI-KNTQAKKTVVVFATNGNPTT 207
Query: 117 LDSIRTVYGVSVASNLVQL-----------EASEYNDSSSFVFKMDGYVSNSNYVAKKTT 165
++I VYG L+ L E D S + ++ G++S + + T
Sbjct: 208 KENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNI-QVRGHISRPVFGEGRQT 266
Query: 166 ---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV 222
+LFVN R + +A+ VY + F A PF++ + DVNV P KR +
Sbjct: 267 PDRQMLFVNSRPCALPQITKAINEVYKS-FNLAQSPFVFADFHMDTNAYDVNVSPDKRTI 325
Query: 223 SLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSP 260
L + ++E ++ +++ KL +S D + Q + P
Sbjct: 326 LLHDAGALIESLKQSLQ-KLFESADQTVPQSQILGKLP 362
>UNIPROTKB|Q9RTR0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243230 "Deinococcus radiodurans R1" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000513
GenomeReviews:AE000513_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
PIR:G75364 RefSeq:NP_295419.1 ProteinModelPortal:Q9RTR0
GeneID:1800018 KEGG:dra:DR_1696 PATRIC:21631024 OMA:ATMACHA
ProtClustDB:CLSK445200 BioCyc:DRAD243230:GH46-2065-MONOMER
Uniprot:Q9RTR0
Length = 547
Score = 209 (78.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 65/240 (27%), Positives = 108/240 (45%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
+GFRGEAL + G + +TT + R+ + +E + A GT + V LF
Sbjct: 96 LGFRGEALWAAAQAGELELTTRPAAQVGAARLRAQGDAVEVSRTSAPA--GTTVTVSQLF 153
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+ AR +T +++ + I LL R +HH+ + + G R H A + ++
Sbjct: 154 ARLPARLRTQASAAAEVRDITALLGRYVLHHSALHWRLTVDGDPRL-TH--APADHRGAV 210
Query: 121 RTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAP 179
TVYG A+ ++ L+ G VS A++ M VN R + P
Sbjct: 211 ATVYGPLSANRVLTLDTPGVR----------GVVSRPELTRARRDRMHFAVNGRPIVAPP 260
Query: 180 -LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
L+RAV YA P + P + + + PE D N+HP K+ V+L + + +++ AV
Sbjct: 261 ELERAVIDAYAELLPAGTAPLCVLDLTVAPEDYDPNIHPAKQVVALADLPAVALRVRDAV 320
Score = 42 (19.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 362 SFIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLML 421
+ +G+ ++Y L Q +++ + + + +Y+ + R A L P P ELL L
Sbjct: 355 TLLGVYQELYLLAQGEGDLWVVDAHAAHERALYERLGRELG--TAAPLELPTP--ELLHL 410
>UNIPROTKB|P74925 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243274 "Thermotoga maritima MSB8" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 EMBL:U71053 PIR:H72427
RefSeq:NP_227838.1 ProteinModelPortal:P74925 GeneID:896837
KEGG:tma:TM0022 PATRIC:23934884 OMA:IQTLGFR ProtClustDB:CLSK874928
Uniprot:P74925
Length = 510
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 68/254 (26%), Positives = 114/254 (44%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+ V + T T+ ++ G +E E GT + V +LF+
Sbjct: 93 GFRGEALASIVQVSRAKIVTKTEKDALATQLMIAGGKVE-EISETHRDTGTTVEVRDLFF 151
Query: 62 NMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSIR 121
N+ RRK+L++S+ + ++ R + +V F G VHS + +
Sbjct: 152 NLPVRRKSLKSSAIELRMCREMFERFVLVRNDVDFVFTSDGKI---VHSFPRTQNIFERA 208
Query: 122 TVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRLVECAPL 180
+ + + E E + ++ G VS+ + +T +VN R V L
Sbjct: 209 LLILEDLRKGYITFE-EELSG-----LRIKGIVSSREVTRSSRTGEYFYVNGRFVVSEEL 262
Query: 181 KRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAVEL 240
+ VY PK S P + I + PE +DVN+HP+K V LN+E + + ++ ++
Sbjct: 263 HEVLMKVY--DLPKRSYPVAVLFIEVNPEELDVNIHPSKIVVKFLNEEKVKKSLEETLKR 320
Query: 241 KL-RQSNDSRTYKE 253
L R+ S Y+E
Sbjct: 321 NLARKWYRSVAYEE 334
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 207 (77.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 70/229 (30%), Positives = 109/229 (47%)
Query: 1 MGFRGEALASMTYVGHVT-VTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENL 59
+GFRGEAL S+ V V ++ + L G + G ++S C GT I V NL
Sbjct: 92 LGFRGEALPSIASVAQVICISRVADAEL-GVELRIAGGEVQSR-LPCGCPVGTTITVRNL 149
Query: 60 FYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDS 119
FYN RR+ L++ + + I ++ + A+ + VSFS G ++ TS D
Sbjct: 150 FYNTPVRREYLRSEATETGAISAIVQQYALAYPEVSFSLLIDGRM-----ALQTSGDGD- 203
Query: 120 IRTV----YGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYV-AKKTTMVLFVNDRL 174
+RTV YG+ V L+ ++A E ++V ++G +S + + + LF N R
Sbjct: 204 LRTVVVELYGLEVGRALLPVQA-EAGVDETWV-AVNGLISPPELTRSSRNYLSLFANRRA 261
Query: 175 VEC-APLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREV 222
++ L VE Y K P + + + P +DVNVHPTK EV
Sbjct: 262 LQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAIDVNVHPTKSEV 310
>UNIPROTKB|Q3KLC2 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:315277 "Chlamydia trachomatis A/HAR-13" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000051 GenomeReviews:CP000051_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
ProtClustDB:PRK00095 RefSeq:YP_328398.1 ProteinModelPortal:Q3KLC2
STRING:Q3KLC2 GeneID:3687613 KEGG:cta:CTA_0625 PATRIC:32023166
OMA:RRGFQKS BioCyc:CTRA315277:GI4C-650-MONOMER Uniprot:Q3KLC2
Length = 576
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 111/441 (25%), Positives = 189/441 (42%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAV---KGTQIMVEN 58
GFRGEAL S+ + + + T G L G + G EP C +GT I V +
Sbjct: 98 GFRGEALPSIASISKMEIHTARAGGL-GSKTLIEKG----EPVCCEPAPRQQGTTIAVHS 152
Query: 59 LFYNMIARRKTLQNSSD-DYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRL 117
LFYN + R++ Q S D I LL + + ++ R +++ +
Sbjct: 153 LFYN-VPMRQSFQKSPQMDRLAIRRLLENSVLSSEGIGWTWISE--CRQELYVAKKQGFI 209
Query: 118 DSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSN-YVAKKTTMVLFVNDRLVE 176
+ + V G S VQ EA + D ++ G++ + N + + + LF+N+R VE
Sbjct: 210 ERVALVLGES----FVQ-EAF-FIDKQQGDLRVLGFLGSPNQHRSTRQGQRLFINNRAVE 263
Query: 177 CAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQS 236
+ + + V YA P P + + LPP D NVHP K EV LL + I +
Sbjct: 264 SSFISKKVAEAYAWMIPAQRYPIFVLKLFLPPMWCDFNVHPQKTEVRLLQEGQISNLLVE 323
Query: 237 AV-ELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKV-PVNKMVRTDSSD 294
A+ E LR+S E+TV P+ + + + G + + P +V S
Sbjct: 324 AISEALLRRSPSL----EETVLKVPT------EKIPIENEGISVPSIRPA--IVSAPLSC 371
Query: 295 PAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVDRNCHSGL 354
P Y++++ T + S + S+ S V + R L + L++D + H
Sbjct: 372 PTFSQQPYLKTEMAT-IVSRDSASSSLSVVEKVRFLTSLGKVL----LVEDSE-GVHVVF 425
Query: 355 LDIVR-HCSFIGMADD-VYALLQHNTHMYLANVVSLSKELMYQLVLRRFAHFNA--IQLS 410
+ R H ++ + + + + L T + L + V ++K L + R A I+LS
Sbjct: 426 VQAARKHLFYVSLLSERLESRLACQTFL-LPSSVQMTK-LEADFLQMRLEALTALGIELS 483
Query: 411 DPAPLSELLMLA---LKEEDL 428
+P S + A ++EE+L
Sbjct: 484 RISPDSFAIESAPPFIQEEEL 504
>UNIPROTKB|H0Y793 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
ProteinModelPortal:H0Y793 Ensembl:ENST00000458009 Uniprot:H0Y793
Length = 95
Score = 176 (67.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 131 NLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYA 189
N V E E + + FKM+GY+SN+NY KK +LF+N RLVE L++A+E VYA
Sbjct: 3 NAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFLLFINHRLVESTSLRKAIETVYA 62
Query: 190 ATFPKASKPFIYMSI 204
A PK + PF+Y+ +
Sbjct: 63 AYLPKNTHPFLYLRL 77
>TIGR_CMR|APH_0939 [details] [associations]
symbol:APH_0939 "DNA mismatch repair protein MutL"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
RefSeq:YP_505509.1 ProteinModelPortal:Q2GJE2 STRING:Q2GJE2
GeneID:3931281 KEGG:aph:APH_0939 PATRIC:20950598
HOGENOM:HOG000256550 KO:K03572 OMA:IRNGTPM ProtClustDB:CLSK2465330
BioCyc:APHA212042:GHPM-952-MONOMER Uniprot:Q2GJE2
Length = 634
Score = 204 (76.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 66/240 (27%), Positives = 111/240 (46%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
MGFRGE L ++ V V + + + +++ G + GT + V +LF
Sbjct: 91 MGFRGEGLTAVASVARVKMVSKHVDAERAWSITFEGGEKTRDLTPGVLSCGTHVEVRDLF 150
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLDSI 120
+ R K L+ + IVDLL+R+A+ + ++FS R A S ++ +
Sbjct: 151 FATPTRLKFLRTEKAEMQNIVDLLNRLAMINYTIAFSLTI--VERQIFKYSAQESLIERL 208
Query: 121 RTVYGVSVASNLVQLEAS-EYNDSSSFVFKMDGYVSNSNYVAKKTTMV-LFVNDRLVECA 178
+ + A V E S E N S V ++ G++ + K MV FVN R +
Sbjct: 209 KEMR----AFGEVFCEQSLEINHSIDHV-RVYGHIGLPTFNKSKPGMVHTFVNGRPIYST 263
Query: 179 PLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
L AV+ Y PK P + +++ + P +VDVNVHP+K EV ++ L+ + + A+
Sbjct: 264 LLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVDVNVHPSKMEVRFQDKRLVYKAVLDAL 323
Score = 41 (19.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 498 DVDWEDEKCCFQAIAAALG-----NFYAMHPPLLPNPSG 531
+V ++D++ ++A+ ALG N YA P G
Sbjct: 306 EVRFQDKRLVYKAVLDALGEALSSNVYARFSPAATTSEG 344
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 129 (50.5 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 48/180 (26%), Positives = 82/180 (45%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEAL+S+ + VT++T K G R+ + ++ +GT + ++ LF+
Sbjct: 120 GFRGEALSSLCALSDVTISTCHKSAKVGTRLVFDHNGKITQKAPYPRQQGTTVSIQQLFH 179
Query: 62 NMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH-GAAR-ADVHSIATSSRL- 117
+ R K Q N +Y K+V +L I V +C G + + V S L
Sbjct: 180 TLPVRHKEFQRNIKKEYAKMVQILQAYCIISKGVRINCTNQVGQGKKSPVVSTTGGPNLK 239
Query: 118 DSIRTVYGVSVASNL---VQL---EA--SEYN----DSSSFVFKMDGYVSNSNYVAKKTT 165
++I V+G +L VQL EA EY D ++ + G++S ++ ++T
Sbjct: 240 ENIGAVFGKKQLQSLIPFVQLPPNEAVCEEYGLKSTDLPEKLYSITGFISRCDHGVGRST 299
Score = 121 (47.7 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 49/205 (23%), Positives = 97/205 (47%)
Query: 147 VFKMDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 203
++ + G++S ++ V + TT F+N R + A + + V VY + K PFI ++
Sbjct: 281 LYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHL-YNKHQYPFIVLN 339
Query: 204 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ-SAVEL---KLRQSNDSRTYKE--QTVE 257
I + E VD+NV P KR++ L ++L++ ++ S +E+ + + N ++ + V+
Sbjct: 340 ICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQNLLDIVGNVK 399
Query: 258 SSPSSPYNPSKDL--HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS----KPHTSV 311
+ P P ++ H + V + R S + +Y QS K S
Sbjct: 400 APPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLRESFSLHQTESYFQSPKKVKQRHSS 459
Query: 312 ASGPNLSAVRSSVR-QRRNLNETAD 335
+ +L + S+VR Q+ L+E ++
Sbjct: 460 SKQLSLDTILSTVRTQKAVLSEDSE 484
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 194 (73.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 63/252 (25%), Positives = 127/252 (50%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVEN 58
+GFRGEAL S+ + + ++T HGY + + + G ++ EP A ++GT + EN
Sbjct: 93 LGFRGEALNSLCMLSDLCISTKHDEFEHGYLLKFDKFGKLIHEEP--IARLRGTTVSCEN 150
Query: 59 LFYNMIARRKTL-QNSSDDYTKIVDLLSRMAIHHTNVSFSC----RKHGAARADVHSIAT 113
+F N+ R+K L +N ++ L+ + AI + + F + G + +++ + T
Sbjct: 151 IFKNIPIRKKDLIKNIKSQLNDLLTLMQQYAIIYHEIKFMIFNVVTQKGCTK-NMNMLIT 209
Query: 114 SSRLDSIRTVYGVSVASNLVQLEASEYN-DSSSFVFKMDGYVSNSNYVAK-KTTMVLFVN 171
+ D + Y + N+ L ++N + +++ K GY+S+SN + K ++N
Sbjct: 210 NGSDDIKKNFYSIFGKKNIGNL--IDFNITNENWLVK--GYISDSNSGRRDKDLQFYYMN 265
Query: 172 DRLVECAP-LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELI 230
+R + + + + +Y F P I +I+ +++D+NV P KREV + +
Sbjct: 266 NRPIHVIKNVNKIINTIYRE-FNSRLYPIIIFNILSDSKNIDINVTPDKREVFFTFENEL 324
Query: 231 VEKIQSAVELKL 242
E+I++ + +KL
Sbjct: 325 CEEIKTEL-IKL 335
Score = 50 (22.7 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 58/284 (20%), Positives = 109/284 (38%)
Query: 221 EVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSK-DLHL-----NP 274
+++L+N EKI++ + K++ + Y T E + N K DLH+ N
Sbjct: 723 QINLINLTNS-EKIRNTIFKKIKDVEKANNYLCLTDEKEENKYNNLFKNDLHIKQNSNNS 781
Query: 275 SGSKLQKVPVNKM-----VRTDSSDPAGRLHAYVQSK--PHTSVASGPNLSAVRSSV--- 324
+ S P+N + + D+ D + Y +S + N + S +
Sbjct: 782 NSSNSSNKPINGIGNEEDINFDNIDEQKK-DLYFKSNLFKKLKICGQFNKGFILSKIDLL 840
Query: 325 --RQRRNLNETADLTSIQELIDDVDRNCHSGLLDIVRHCSFIGMADDVYALLQHNTHMYL 382
+ N ++ D+ E ++VDR + L I +H + + Y + L
Sbjct: 841 YFKNEDNKSKNNDMNETDEN-ENVDRKNNYALFIIDQHAADEKSNFEKYNKIFTMKSQKL 899
Query: 383 ANVVSLS-KELMYQLVLRRFAHF--NAIQLSDPAPLSELLMLALKEEDLDVENSENDDLK 439
N + L ++ + F F N ++ + E + K + D N EN +
Sbjct: 900 INKIELELSPAQIHIIEKNFVIFLRNGFEIEI---IEEPINKKRKINN-DENNDENIISE 955
Query: 440 EKIAEMNTELLKQ---KAEMLEEYFCVKIDTRGNLSRLPIILDQ 480
E + EM LL ++LE + + +L+ PII D+
Sbjct: 956 ETLMEMKVYLLSLPVFNGKILEVVDFMSL--LHHLTNHPIIFDK 997
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 206 (77.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 64/254 (25%), Positives = 132/254 (51%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENL 59
+GFRGEAL S+ + +V +TT + + H Y + + + G + E + A ++GT + EN+
Sbjct: 93 LGFRGEALNSLCMLSNVNITTKNEENDHAYLLKFDKLGRLYHE-EPIARLRGTTVSCENI 151
Query: 60 FYNMIARRKT-LQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHS--IATSSR 116
F+N+ R+K ++N + ++ L+ + AI + N+ F ++ + + ++
Sbjct: 152 FHNIPIRKKDFIKNIKTQVSDLLLLMQQYAIIYHNIKFVIYNIVTSKGCTKNMNLLITNG 211
Query: 117 LDSIR----TVYGVSVASNLVQ--LEASEYNDSSSFVFKMDGYVSNSNYVAK-KTTMVLF 169
DSI+ ++YG NL++ ++ +E+N + GY+S+SN + K +
Sbjct: 212 TDSIKKNFYSIYGKRNIGNLIEFNIDGNEWN--------IRGYISDSNSGRRDKDLQFYY 263
Query: 170 VNDRLVECAP-LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQE 228
+N R + + + + +Y F P I +I+ +++D+NV P KREV ++
Sbjct: 264 INSRPIHILKNVNKLINTIYRE-FNSRLYPIIICNILSDTKNIDINVTPDKREVFFTFEQ 322
Query: 229 LIVEKIQSAVELKL 242
+ E +++A+ +KL
Sbjct: 323 EMCEHMKTAL-VKL 335
Score = 42 (19.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 419 LMLALKEED-LDVENSENDDLKEKIAEMNTELLKQ 452
L L ++D + EN N++++ K E+N+ L Q
Sbjct: 505 LSYTLSQKDYIPTENKMNNNIQIKNDELNSSSLFQ 539
Score = 40 (19.1 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 531 GEGLQCYKKRKPLKNPVDIERYPN 554
G +CYK N ++ E Y N
Sbjct: 1029 GHESECYKTHDNNSNNINCEDYDN 1052
Score = 38 (18.4 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 428 LDVENSENDDLKEKIAEMNTELLKQKAEM------LEEYFCVKIDTRGNL 471
L ++N ++ KE ++MN + + K + EY DT+ N+
Sbjct: 630 LSIDNVMMENNKEHFSDMNNNVYEYKLNNDDTKNNIYEYKLNSDDTKNNI 679
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 206 (77.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 64/254 (25%), Positives = 132/254 (51%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENL 59
+GFRGEAL S+ + +V +TT + + H Y + + + G + E + A ++GT + EN+
Sbjct: 93 LGFRGEALNSLCMLSNVNITTKNEENDHAYLLKFDKLGRLYHE-EPIARLRGTTVSCENI 151
Query: 60 FYNMIARRKT-LQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHS--IATSSR 116
F+N+ R+K ++N + ++ L+ + AI + N+ F ++ + + ++
Sbjct: 152 FHNIPIRKKDFIKNIKTQVSDLLLLMQQYAIIYHNIKFVIYNIVTSKGCTKNMNLLITNG 211
Query: 117 LDSIR----TVYGVSVASNLVQ--LEASEYNDSSSFVFKMDGYVSNSNYVAK-KTTMVLF 169
DSI+ ++YG NL++ ++ +E+N + GY+S+SN + K +
Sbjct: 212 TDSIKKNFYSIYGKRNIGNLIEFNIDGNEWN--------IRGYISDSNSGRRDKDLQFYY 263
Query: 170 VNDRLVECAP-LKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQE 228
+N R + + + + +Y F P I +I+ +++D+NV P KREV ++
Sbjct: 264 INSRPIHILKNVNKLINTIYRE-FNSRLYPIIICNILSDTKNIDINVTPDKREVFFTFEQ 322
Query: 229 LIVEKIQSAVELKL 242
+ E +++A+ +KL
Sbjct: 323 EMCEHMKTAL-VKL 335
Score = 42 (19.8 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 419 LMLALKEED-LDVENSENDDLKEKIAEMNTELLKQ 452
L L ++D + EN N++++ K E+N+ L Q
Sbjct: 505 LSYTLSQKDYIPTENKMNNNIQIKNDELNSSSLFQ 539
Score = 40 (19.1 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 531 GEGLQCYKKRKPLKNPVDIERYPN 554
G +CYK N ++ E Y N
Sbjct: 1029 GHESECYKTHDNNSNNINCEDYDN 1052
Score = 38 (18.4 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 428 LDVENSENDDLKEKIAEMNTELLKQKAEM------LEEYFCVKIDTRGNL 471
L ++N ++ KE ++MN + + K + EY DT+ N+
Sbjct: 630 LSIDNVMMENNKEHFSDMNNNVYEYKLNNDDTKNNIYEYKLNSDDTKNNI 679
>TIGR_CMR|SPO_3362 [details] [associations]
symbol:SPO_3362 "DNA mismatch repair protein MutL"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:YP_168558.1 ProteinModelPortal:Q5LN50 GeneID:3194545
KEGG:sil:SPO3362 PATRIC:23380177 Uniprot:Q5LN50
Length = 621
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 96/362 (26%), Positives = 145/362 (40%)
Query: 2 GFRGEALASMTYVGHVTVTTITKG-HLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL S+ VG +T+T+ +G RVS G K A GT + + +LF
Sbjct: 104 GFRGEALPSLGSVGRLTITSRARGAEAANIRVS---GGRVDPVKPAALRAGTVVELRDLF 160
Query: 61 YNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRK---HGAARADVHSIA-TSSR 116
+ AR K ++ + + D + R+A+ +VSF+ R G R + A T
Sbjct: 161 FATPARLKFMRTDRAEAQAVADTVKRLAMAEPSVSFTLRDVSGGGEGRLVFRADAETGDL 220
Query: 117 LDSIRTVYGVSVASNLVQLEASEYNDSSSFV------FKMDGYVSNSNYV-AKKTTMVLF 169
D++R L Q+ E+ D++ + ++ GY + Y LF
Sbjct: 221 FDALR--------DRLAQVMGREFTDNALRIDTMREGLRLYGYAALPTYSRGAAVAQYLF 272
Query: 170 VNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLN--- 226
VN R V L A+ Y + P + I P VDVNVHP K EV +
Sbjct: 273 VNGRPVRDKMLTGALRAAYFDFLSRDRHPAAALFIDCDPTLVDVNVHPAKSEVRFRDPGV 332
Query: 227 -QELIVEKIQSAV-ELKLRQSND--SRTYKEQTVESSPSSPYN---PSKDLHLN------ 273
+ LIV ++ A+ E R S T E + + Y PS +
Sbjct: 333 ARGLIVSALRHALAEAGHRASTTVAGATLGAMRPEQTGARIYQMDRPSPAARMASHQAQA 392
Query: 274 PSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNET 333
P ++L +MV + + A R P S+ P L A R V + + +T
Sbjct: 393 PGFAELSSSYSGRMVEPEPGEDARRAEEPPAETPPESL---P-LGAARGQVHENYIIAQT 448
Query: 334 AD 335
AD
Sbjct: 449 AD 450
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 128 (50.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL+S+ + + + T K G +V +G ++ CA GT +++ NLF
Sbjct: 117 GFRGEALSSLCALSDMVIQTRHKSTDVGVKVELDHEGRIKKR-SPCARGVGTTVLLANLF 175
Query: 61 YNMIARRKTL-QNSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSSR 116
+ RR+ +N ++TK+ +L + V C H GA + +
Sbjct: 176 STLPVRRRDFTRNIKKEFTKMCQILQAYCLVTKGVRILCSNHTPKGAKTIVLQTHGDQEV 235
Query: 117 LDSIRTVYGVSVASNLVQLEA 137
+ +I ++G A++LV L++
Sbjct: 236 MANISAIFGARQAADLVPLKS 256
Score = 108 (43.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 26/87 (29%), Positives = 50/87 (57%)
Query: 148 FKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 204
F+++G++S+ + A +++ FVN R + + + + VY + +PFIY++I
Sbjct: 299 FQLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIAKVMNEVYHR-YNVQQQPFIYLNI 357
Query: 205 VLPPEHVDVNVHPTKREVSLLNQELIV 231
+ VDVN+ P KR++ L+N E I+
Sbjct: 358 ITARSDVDVNLTPDKRQL-LINNERIL 383
>ZFIN|ZDB-GENE-030616-528 [details] [associations]
symbol:pms1 "PMS1 postmeiotic segregation increased
1 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
ZFIN:ZDB-GENE-030616-528 GO:GO:0005524 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 EMBL:AL672217 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HSSP:P54278 CTD:5378 HOVERGEN:HBG031886
KO:K10864 IPI:IPI00868181 RefSeq:NP_958476.2 UniGene:Dr.85558
ProteinModelPortal:Q8JFR9 STRING:Q8JFR9 GeneID:368631
KEGG:dre:368631 InParanoid:Q8JFR9 NextBio:20813079
ArrayExpress:Q8JFR9 Uniprot:Q8JFR9
Length = 896
Score = 180 (68.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 85/354 (24%), Positives = 143/354 (40%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHG--YRVSYRDGVMESEPKACAAVKGTQIMVENL 59
GFRGEALAS+ + V +TT T Y V + ++ +P +GT + NL
Sbjct: 91 GFRGEALASICAISEVIITTKTADDDFSIQYSVDHNGQIVSQKPSHLG--QGTTVCAANL 148
Query: 60 FYNMIARRKTLQNSS---DDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR 116
F N+ RR+ N+ D+ ++ +LL A+ + + H A S + R
Sbjct: 149 FKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAVIKPELRVTL-SHNKAVVWQKSRVSDHR 207
Query: 117 LDSIRTVYGVSVASNL-VQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLV 175
+ + SVA+ L VQ + + F G NS + +FVN R V
Sbjct: 208 TALMAVLGAASVANMLPVQHHQEQPEITIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPV 267
Query: 176 ECAPLKRAVEIVYAATFPKASK-----PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELI 230
+ + ++ Y + + P M+I +P VDVN+ P K EV L N++ +
Sbjct: 268 HHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEV 327
Query: 231 VEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGS-KLQKVPVNKMVR 289
+ +++ + SN K +P + + +P S K ++P +
Sbjct: 328 LLSVETMLISLYGYSNGEENLK---TAGNPPDVTSLDEPKRTSPDISLKHPELPEDSSSN 384
Query: 290 TDSSDPAGRLH--AYVQSKPHTS--VASGPNLSAVRSSVR-QRRNLNETADLTS 338
+ D L A S + V + +L ++ SV +N TADL S
Sbjct: 385 AEKQDGELSLSNTANTSSSSISEDWVINRSDLDSINCSVPVDDVVMNSTADLNS 438
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 152 (58.6 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 44/148 (29%), Positives = 70/148 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRV--SYRDGVMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+ + +++ P C KGT + V+NL
Sbjct: 105 GFRGEALSSLCALSDVTISTCHVSASIGTRLVLDHNGKIIQKTP--CPRPKGTTVSVQNL 162
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSS 115
FY + R K Q N +Y K+V +L I + SC G + V + +S
Sbjct: 163 FYTLPVRHKEFQRNIKKEYAKMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSSG 222
Query: 116 RLDSIRTVYGVSVASNLVQLEASEYNDS 143
++I +V+G +LV +DS
Sbjct: 223 MKENIGSVFGQKQLQSLVPFVQLPPSDS 250
Score = 75 (31.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 12/41 (29%), Positives = 29/41 (70%)
Query: 198 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
PF+ +++ + E VD+NV P KR++ L ++L++ +++++
Sbjct: 320 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 360
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 169 (64.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 60/236 (25%), Positives = 114/236 (48%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL +++ + +T+TT T YR + +D ++S+ +GT I + +LF
Sbjct: 92 GFRGEALNAISVLSQLTITTKTDSDEMAYRYQFNQDNTIKSKTLV-PRERGTTISLTDLF 150
Query: 61 YNMIARRKTL-QNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS----- 114
N+ R++ +N Y K+V++++ AI N C + +++ I S
Sbjct: 151 GNIPVRKQEFNKNIISQYNKLVNMITEYAIISVNCQI-CLINQSSKKGREMILNSGSPMK 209
Query: 115 SRLDSIRTVYGVSVASNLVQLE---ASEYNDSSSFVF--KMDGYVSNSNYVAKKTTMVLF 169
+ L V+ ++ LV L+ E + ++ + G V +S + K + LF
Sbjct: 210 NMLQKTAQVFSKKISDMLVDLKFDFGEECSVIEGYILNRQTSGSVQDSKSIQKNMSY-LF 268
Query: 170 VNDRLVECAPLKRAVEIVYAATFPK--ASKPFIY-MSIVLPPEHVDVNVHPTKREV 222
VN R V P K+ + +++ + K +S +IY + + + + +D NV P KR++
Sbjct: 269 VNTRPVN--PFKK-MNSIFSDIYKKYNSSARYIYILHLKVKKDAIDFNVSPDKRDI 321
Score = 55 (24.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 54/294 (18%), Positives = 125/294 (42%)
Query: 230 IVEKIQSAVELKLRQSNDS-RTYKEQTVESSPSSPYNPSKDLH-LNPSGSKLQKVPVNKM 287
I ++ + A E +L+ + + + KE+ E+ SKD + N + SK Q + ++
Sbjct: 505 IAQQRKKAYEEQLQNTREELQNSKEEYQENYQKKQQTSSKDHNNQNKTDSK-QLINEDEE 563
Query: 288 VRTDSSDPAGRLHAYVQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTSIQELIDDVD 347
D S +L Y QSK + S + + ++ ++ Q++ ++ +
Sbjct: 564 QNQDFSYFNDKLKLYKQSKQQSENNSKYQVKEYSFDMFKKSKQENSSKGQDNQKINNEDE 623
Query: 348 RNCHSGLLDIVRHCS-----FIGMADDVYALLQHNTHMYLANVVSLSKELMYQLVLRRFA 402
NC ++ S + +Y + + L SL++E +LV + F
Sbjct: 624 ENCDDQCCTQSQNYSNSQNEYKSEDSSLYKMKEEKQTKQLKQ--SLNQE---ELVQKHFQ 678
Query: 403 HFNAIQLSDPAPLSELLMLALK-EED----LDVENSENDDLKEKIAEMNTELLKQKAEML 457
++ + +EL+ + K ++D +++ + D+++E ++ +L ++E
Sbjct: 679 IQEEARILNKKQNNELMEIDEKIDQDQGRAFKIKSKKEDEIEELADDLEEQLKTWESEDF 738
Query: 458 EEYFCVKIDTRGNLSRLPIILDQYTPDMDRIPEFVLCLGNDVDWEDEKCCFQAI 511
++ V++ G ++ II Y + D+I F++ D DEK ++ +
Sbjct: 739 KKDKFVELQIIGQFNKAFIIA--YWVEKDQI--FLI----DQHASDEKTNYERL 784
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 423 LKEEDLDVENSENDDLKE 440
++EEDL E+SE ++ KE
Sbjct: 404 IQEEDLSNEDSEANNQKE 421
Score = 38 (18.4 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 218 TKREVSLLNQELIVEK---IQSAVE-LKLRQSND 247
TK+ LNQE +V+K IQ L +Q+N+
Sbjct: 660 TKQLKQSLNQEELVQKHFQIQEEARILNKKQNNE 693
>UNIPROTKB|F1SN54 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:CU467085 EMBL:CU582834
Ensembl:ENSSSCT00000017470 Uniprot:F1SN54
Length = 922
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 84/382 (21%), Positives = 166/382 (43%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL S+ V V +TT T + Y DG ++ +P +GT +
Sbjct: 91 GFRGEALGSICCVAEVLITTRTASD--NFSTQYVLDGSGHIISQKPSHLG--QGTTVTAL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
LF N+ R++ T + D+ K+ DLL + V H A + +
Sbjct: 147 KLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGVLKPEVRLVFI-HNKAIIWQKTRVSD 205
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM------VL 168
++ ++ +V G +V N+ EA +Y+ S ++ + G++ N T++ +
Sbjct: 206 HKM-ALMSVLGTAVMGNM---EAFQYHSEESQIY-LSGFLPKHNADHSVTSLSTPERSFI 260
Query: 169 FVNDRLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLL 225
F+N R V + + + Y K + P ++ I +P VDVN+ P K +V L
Sbjct: 261 FINSRPVHQKDILKLIRHYYNLKCLKETTRLYPIFFLKIDVPTVDVDVNLTPDKSQVLLQ 320
Query: 226 NQELIVEKIQSAVELKLRQSNDSRTYK-EQTVESSPSSPYNPSKD---LHLNPSGSKLQK 281
N+E ++ +++ + + +Y+ ++T SS + N + + L + G+
Sbjct: 321 NKESVLIALENLMTTCYGSLPSTNSYESDKTDVSSADTVVNKATETDVLFMETCGNNYPN 380
Query: 282 VPVNKMV-RTD-SSDPAGRLHAY-VQSKPHTSVASGPNLSAVRSSVRQRRNLNETADLTS 338
V + ++ + D D +G + V + H + G + ++ SS+ +N ++ + +
Sbjct: 381 VDTSAILFQNDVHDDKSGNNTDFCVDPQIHVADHFGDHFNSENSSID--KNTSQGIPMNN 438
Query: 339 IQELIDDVDRNCHSGLLDIVRH 360
+ L + + L+D V H
Sbjct: 439 LP-LKNTQKEYSETRLVDSVEH 459
>UNIPROTKB|E2RAQ2 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 KO:K10864 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AAEX03017899 RefSeq:XP_536002.1
Ensembl:ENSCAFT00000014945 GeneID:478840 KEGG:cfa:478840
Uniprot:E2RAQ2
Length = 930
Score = 172 (65.6 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 66/274 (24%), Positives = 120/274 (43%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL S+ V V +TT T + Y DG ++ +P +GT + V
Sbjct: 91 GFRGEALGSICCVAEVLITTRTASD--NFSTQYVLDGSGHIISQKPSHLG--QGTTVTVL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
LF N+ R++ T + D+ K+ DLL I + H A S
Sbjct: 147 KLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGILKPELRIVFI-HNKA-VIWQKTRVS 204
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM------VL 168
R ++R V G +V N+ E +Y+ S ++ + G++ + T++ +
Sbjct: 205 DRQVALRAVLGTAVMGNM---EPFQYHPEDSQIY-LSGFLPKHDVDHSSTSLSTPERSFI 260
Query: 169 FVNDRLVECAPLKRAVEIVY-AATFPKASK--PFIYMSIVLPPEHVDVNVHPTKREVSLL 225
F+N+R V + + + Y +AS+ P ++ I +P VDVN+ P K +V +
Sbjct: 261 FINNRPVHQKDILKLIRHYYNLKCLKEASRLYPIFFLKIDVPTADVDVNITPDKSQVLIQ 320
Query: 226 NQELIVEKIQSAVELKLRQSNDSRTYKEQTVESS 259
N+E ++ +++ + + +Y+ + S
Sbjct: 321 NKEAVLIALENLMTTCYGSLPSTNSYENNKTDVS 354
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 145 (56.1 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 45/145 (31%), Positives = 69/145 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEAL+S+ + VT++T G R+ + ++ KGT + V++LFY
Sbjct: 105 GFRGEALSSLCALSDVTISTCHGSASVGTRLVFDHNGKITQKTPYPRPKGTTVSVQHLFY 164
Query: 62 NMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSSRL 117
+ R K Q N +Y+K+V +L I V SC G A V + TS
Sbjct: 165 TLPVRYKEFQRNIKKEYSKMVQVLQAYCIISAGVRVSCTNQLGQGKRHAVVCTSGTSGMK 224
Query: 118 DSIRTVYGVSVASNL---VQLEASE 139
++I +V+G +L VQL S+
Sbjct: 225 ENIGSVFGQKQLQSLIPFVQLPPSD 249
Score = 75 (31.5 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 12/41 (29%), Positives = 29/41 (70%)
Query: 198 PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
PF+ +++ + E VD+NV P KR++ L ++L++ +++++
Sbjct: 319 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 42 (19.8 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 15/44 (34%), Positives = 18/44 (40%)
Query: 232 EKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPS 275
EKI+ L + + V SS SS YN S L PS
Sbjct: 489 EKIEKDSGLSSTSAGSEEEFSTPEVASSFSSDYNVSS-LEDRPS 531
>UNIPROTKB|P54277 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006200 "ATP catabolic
process" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 GO:GO:0005524 GO:GO:0016887 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:CH471058 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
Orphanet:144 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:U13695 EMBL:AB102870
EMBL:AB102875 EMBL:AY267352 EMBL:AC008122 EMBL:BC096330
EMBL:BC096332 IPI:IPI00005541 IPI:IPI00654710 IPI:IPI00896518
PIR:S47597 RefSeq:NP_000525.1 RefSeq:NP_001121615.1
RefSeq:NP_001121616.1 UniGene:Hs.111749 PDB:2CS1 PDBsum:2CS1
ProteinModelPortal:P54277 SMR:P54277 IntAct:P54277 STRING:P54277
PhosphoSite:P54277 DMDM:1709683 PaxDb:P54277 PRIDE:P54277
DNASU:5378 Ensembl:ENST00000409823 Ensembl:ENST00000441310
Ensembl:ENST00000447232 GeneID:5378 KEGG:hsa:5378 UCSC:uc002urh.4
CTD:5378 GeneCards:GC02P190648 H-InvDB:HIX0029784 HGNC:HGNC:9121
HPA:CAB010233 MIM:600258 neXtProt:NX_P54277 PharmGKB:PA33447
HOGENOM:HOG000039972 HOVERGEN:HBG031886 InParanoid:P54277 KO:K10864
OMA:PFFHHLT OrthoDB:EOG41C6VK PhylomeDB:P54277 ChiTaRS:PMS1
EvolutionaryTrace:P54277 GenomeRNAi:5378 NextBio:20866
ArrayExpress:P54277 Bgee:P54277 CleanEx:HS_PMS1
Genevestigator:P54277 GermOnline:ENSG00000064933 Uniprot:P54277
Length = 932
Score = 161 (61.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 62/251 (24%), Positives = 116/251 (46%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL S+ + V +TT T + Y DG ++ +P +GT +
Sbjct: 91 GFRGEALGSICCIAEVLITTRTAAD--NFSTQYVLDGSGHILSQKPSHLG--QGTTVTAL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
LF N+ R++ T + D+ KI DLL I ++ H A S +
Sbjct: 147 RLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLRIVF-VHNKAVIWQKSRVSD 205
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV----SNSNYVAKKTT--MVL 168
++ ++ +V G +V +N+ E+ +Y+ S ++ + G++ ++ ++ + T +
Sbjct: 206 HKM-ALMSVLGTAVMNNM---ESFQYHSEESQIY-LSGFLPKCDADHSFTSLSTPERSFI 260
Query: 169 FVNDRLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLL 225
F+N R V + + + Y K S P ++ I +P VDVN+ P K +V L
Sbjct: 261 FINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQ 320
Query: 226 NQELIVEKIQS 236
N+E ++ +++
Sbjct: 321 NKESVLIALEN 331
Score = 56 (24.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 375 QHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSE 434
+H L+N L + L Q+ RR + +Q+ P + L + K+ +D+E +
Sbjct: 665 KHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQI--PFSMKNLKINFKKQNKVDLEEKD 722
Query: 435 NDDLKEKIAEMNTELLKQKAEML 457
L + + L+ K E++
Sbjct: 723 EPCLIHNLRFPDAWLMTSKTEVM 745
Score = 43 (20.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 219 KREVSLLNQELIVEKIQSAVELKLRQSN 246
K + SL NQ + E +QS +E K R N
Sbjct: 667 KLKTSLSNQPKLDELLQSQIE-KRRSQN 693
Score = 40 (19.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 415 LSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEM 456
+ EL +EE L E DL+ ++M ++Q+++M
Sbjct: 605 IEELWKTLSEEEKLKYEEKATKDLERYNSQMK-RAIEQESQM 645
>UNIPROTKB|D4A651 [details] [associations]
symbol:D4A651 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
IPI:IPI00782442 PRIDE:D4A651 Ensembl:ENSRNOT00000043714
ArrayExpress:D4A651 Uniprot:D4A651
Length = 910
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 67/275 (24%), Positives = 119/275 (43%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL ++ V V VTT T + Y DG ++ +P +GT + V
Sbjct: 91 GFRGEALGAICNVAEVVVTTRTAAD--DFSTQYVLDGSGHILSQKPSHLG--QGTTVTVL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
LF N+ RR+ T + D+ + DLL A+ ++ + H A S
Sbjct: 147 KLFKNLPVRRQFYSTPKKCKDELKNVQDLLISYAVLKPDLRITF-VHNKAVIWQKSRVPD 205
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSF----VFKMDGYVSNSNYVAKKTTMVLFV 170
R+ ++ +V G +V N+ +E Y + S +F NS ++ +F+
Sbjct: 206 HRM-ALMSVLGTAVMGNMESVE--RYCEDSQIHLRGLFPKHDADHNSTSLSTPERSFIFI 262
Query: 171 NDRLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLLNQ 227
N R V + + + Y K S P ++ I +P VD+N+ P K +V L N+
Sbjct: 263 NSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNK 322
Query: 228 ELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSS 262
E ++ +++ + + +Y+ V+ S ++
Sbjct: 323 ESVLIALENLLMTCYGPLPTTESYENNRVDVSSAN 357
>RGD|1359511 [details] [associations]
symbol:Pms1 "postmeiotic segregation increased 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006298 "mismatch repair" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR009071
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 RGD:1359511 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 HSSP:P23367 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 HOVERGEN:HBG031886
KO:K10864 EMBL:BC061722 IPI:IPI00421583 RefSeq:NP_001009535.1
UniGene:Rn.47945 ProteinModelPortal:Q6P7D0 SMR:Q6P7D0 STRING:Q6P7D0
GeneID:494322 KEGG:rno:494322 UCSC:RGD:1359511 NextBio:697597
Genevestigator:Q6P7D0 Uniprot:Q6P7D0
Length = 919
Score = 167 (63.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 67/275 (24%), Positives = 119/275 (43%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL ++ V V VTT T + Y DG ++ +P +GT + V
Sbjct: 91 GFRGEALGAICNVAEVVVTTRTAAD--DFSTQYVLDGSGHILSQKPSHLG--QGTTVTVL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
LF N+ RR+ T + D+ + DLL A+ ++ + H A S
Sbjct: 147 KLFKNLPVRRQFYSTPKKCKDELKNVQDLLISYAVLKPDLRITF-VHNKAVIWQKSRVPD 205
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSF----VFKMDGYVSNSNYVAKKTTMVLFV 170
R+ ++ +V G +V N+ +E Y + S +F NS ++ +F+
Sbjct: 206 HRM-ALMSVLGTAVMGNMESVE--RYCEDSQIHLRGLFPKHDADHNSTSLSTPERSFIFI 262
Query: 171 NDRLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLLNQ 227
N R V + + + Y K S P ++ I +P VD+N+ P K +V L N+
Sbjct: 263 NSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNK 322
Query: 228 ELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSS 262
E ++ +++ + + +Y+ V+ S ++
Sbjct: 323 ESVLIALENLLMTCYGPLPTTESYENNRVDVSSAN 357
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 114 (45.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 147 VFKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 203
+FK+ G+VS+ + + T +++N+R VE + + + VY F K P I +
Sbjct: 265 LFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQ-FNKKQYPIIVLF 323
Query: 204 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
I +PPE +DVNV P K+ V L + ++ +++++
Sbjct: 324 IDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASM 358
Score = 105 (42.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 33/132 (25%), Positives = 63/132 (47%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENL 59
+GFRGEAL ++ V V++ T G R++Y G + A + GT I+V L
Sbjct: 95 LGFRGEALNALCTVSSVSIFTRASDTEIGTRLTYDHSGNIICRQSAAREL-GTTIIVNKL 153
Query: 60 FYNMIARRKTLQNSSD-DYTKIVDLLSRMAIHHTNVSFSCRKH-GAARADVHSI--ATSS 115
F + RRK L+ S ++ K++ + A+ ++ C + + ++ T+S
Sbjct: 154 FETLPVRRKELERSQKREFVKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTS 213
Query: 116 RLDSIRTVYGVS 127
D + ++G++
Sbjct: 214 IQDVVANLFGIA 225
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 318 SAVRSSVRQRRNLN 331
S VRSSV RR +N
Sbjct: 370 STVRSSVEDRRIMN 383
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 114 (45.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 147 VFKMDGYVSNSNYVAKKTT---MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 203
+FK+ G+VS+ + + T +++N+R VE + + + VY F K P I +
Sbjct: 265 LFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQ-FNKKQYPIIVLF 323
Query: 204 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
I +PPE +DVNV P K+ V L + ++ +++++
Sbjct: 324 IDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASM 358
Score = 105 (42.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 33/132 (25%), Positives = 63/132 (47%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDGVMESEPKACAAVKGTQIMVENL 59
+GFRGEAL ++ V V++ T G R++Y G + A + GT I+V L
Sbjct: 95 LGFRGEALNALCTVSSVSIFTRASDTEIGTRLTYDHSGNIICRQSAAREL-GTTIIVNKL 153
Query: 60 FYNMIARRKTLQNSSD-DYTKIVDLLSRMAIHHTNVSFSCRKH-GAARADVHSI--ATSS 115
F + RRK L+ S ++ K++ + A+ ++ C + + ++ T+S
Sbjct: 154 FETLPVRRKELERSQKREFVKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTS 213
Query: 116 RLDSIRTVYGVS 127
D + ++G++
Sbjct: 214 IQDVVANLFGIA 225
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 318 SAVRSSVRQRRNLN 331
S VRSSV RR +N
Sbjct: 370 STVRSSVEDRRIMN 383
>UNIPROTKB|F1MW63 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:DAAA02003905 EMBL:DAAA02003906
EMBL:DAAA02003907 IPI:IPI00702663 UniGene:Bt.20671
Ensembl:ENSBTAT00000025019 Uniprot:F1MW63
Length = 932
Score = 164 (62.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 65/274 (23%), Positives = 122/274 (44%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL S+ + V++TT T + Y DG ++ +P +GT +
Sbjct: 91 GFRGEALGSICCIAEVSITTKTAAD--NFSTQYVLDGGGHIISQKPSHLG--QGTTVTAL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATS 114
LF N+ R++ T + D+ KI DLL I +V H A + +
Sbjct: 147 RLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYGILKPDVRIVFI-HNKAIIWQKTRVSD 205
Query: 115 SRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTM------VL 168
++ ++ +V G +V N+ E+ +Y+ S +F + G++ + T++ +
Sbjct: 206 HKM-ALMSVLGTTVMGNM---ESFQYHCEESQIF-LSGFLPKHDADHSCTSLSTPERSFI 260
Query: 169 FVNDRLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLL 225
F+N R V + + + Y K S P ++ I +P VDVN+ P K +V L
Sbjct: 261 FINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPTADVDVNLTPDKSQVLLQ 320
Query: 226 NQELIVEKIQSAVELKLRQSNDSRTYKEQTVESS 259
N+E ++ +++ + + + +Y+ + S
Sbjct: 321 NKESVLIALENLMTTRYGSLPSTNSYESNKTDVS 354
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 121 (47.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/205 (23%), Positives = 97/205 (47%)
Query: 147 VFKMDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMS 203
++ + G++S ++ V + TT F+N R + A + + V VY + K PFI ++
Sbjct: 258 LYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHL-YNKHQYPFIVLN 316
Query: 204 IVLPPEHVDVNVHPTKREVSLLNQELIVEKIQ-SAVEL---KLRQSNDSRTYKE--QTVE 257
I + E VD+NV P KR++ L ++L++ ++ S +E+ + + N ++ + V+
Sbjct: 317 ICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQNLLDIVGNVK 376
Query: 258 SSPSSPYNPSKDL--HLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQS----KPHTSV 311
+ P P ++ H + V + R S + +Y QS K S
Sbjct: 377 APPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLRESFSLHQTESYFQSPKKVKQRHSS 436
Query: 312 ASGPNLSAVRSSVR-QRRNLNETAD 335
+ +L + S+VR Q+ L+E ++
Sbjct: 437 SKQLSLDTILSTVRTQKAVLSEDSE 461
Score = 92 (37.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEAL+S+ + VT++T K G R+ + ++ +GT + ++ LF+
Sbjct: 97 GFRGEALSSLCALSDVTISTCHKSAKVGTRLVFDHNGKITQKAPYPRQQGTTVSIQQLFH 156
Query: 62 NMIARRKTLQNS 73
+ R K Q +
Sbjct: 157 TLPVRHKEFQRN 168
>UNIPROTKB|Q7NL47 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:251221 "Gloeobacter violaceus PCC 7421" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:BA000045 GenomeReviews:BA000045_GR HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 RefSeq:NP_924225.1
ProteinModelPortal:Q7NL47 GeneID:2598842 KEGG:gvi:gvip188
PATRIC:22041969 OMA:NTHKAIN BioCyc:GVIO251221:GH9A-1330-MONOMER
Uniprot:Q7NL47
Length = 573
Score = 159 (61.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 57/245 (23%), Positives = 101/245 (41%)
Query: 1 MGFRGEALASMTYVGHVTVTTITKGHLHGYRVSY--RDGVMESEPKACAAVKGTQIMVEN 58
+GFRGE L S+ V + + T T R Y + ++ES+P AA GT + V
Sbjct: 134 LGFRGEGLHSIAVVARLEILTCTPTARTATRARYDHKGELVESQP--AAAAPGTVVTVSE 191
Query: 59 LFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
LF RR+ L ++ + L+ R A+ + F G + + + A +
Sbjct: 192 LFELQPVRRRFLADTKAQVRAVTQLVHRYALAYPGHLFELAVDGRLQLQLWA-APGLKQR 250
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECA 178
+++ + +L ++ + S A+ + +++N R V
Sbjct: 251 ALQLLNSYD-EHDLREVHLERDGRRVRLAIGLPDRCSR----ARADWLQIYINGRFVRHG 305
Query: 179 PLKRAVEIVYAATFPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQSAV 238
L++AV + T +P + ++LP + VD N HP K EV L E + +A+
Sbjct: 306 ELEQAVRAGFERTLRPGRQPVCIVQLILPADEVDWNRHPAKLEVQLAGTAPACELVVAAI 365
Query: 239 ELKLR 243
LR
Sbjct: 366 GEGLR 370
Score = 39 (18.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 407 IQLSDPAPLSELLMLALKE 425
+QL+ AP EL++ A+ E
Sbjct: 349 VQLAGTAPACELVVAAIGE 367
>ZFIN|ZDB-GENE-060810-45 [details] [associations]
symbol:mlh3 "mutL homolog 3 (E. coli)" species:7955
"Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 ZFIN:ZDB-GENE-060810-45 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 GeneTree:ENSGT00550000074903 EMBL:BX957326
IPI:IPI00488975 Ensembl:ENSDART00000143694 Bgee:E9QGN2
Uniprot:E9QGN2
Length = 1171
Score = 152 (58.6 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 48/177 (27%), Positives = 87/177 (49%)
Query: 2 GFRGEALASMTYVGH-VTVTTITKGHLHGYRVSYRD-GVMES-EPKACAAVKGTQIMVEN 58
GFRGEA++S+ + V +++ TK + Y S+ + +E E + GT + V N
Sbjct: 91 GFRGEAISSIVSLAEMVEISSRTKQSVKTYVKSFNETNALEVFEAQTVRPSAGTTVSVYN 150
Query: 59 LFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
LF+NM RRK + + +I + +++ H +VSF+ +K +A V TSS
Sbjct: 151 LFHNMPVRRKRMDPVLET-ERIRQRVEAISLMHPSVSFTVKKENSAHMMVQLSKTSSTYY 209
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLV 175
++G++ A L ++ Y F++ G++ + + LFVN+RL+
Sbjct: 210 RFVQIHGLNRAQKLGEVN---YEHEQ---FQITGHIGREGHY-NNSLQFLFVNERLL 259
>UNIPROTKB|G3V419 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 EMBL:AL049780
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V419 SMR:G3V419 Ensembl:ENST00000556257
ArrayExpress:G3V419 Bgee:G3V419 Uniprot:G3V419
Length = 1275
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 84/363 (23%), Positives = 149/363 (41%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGH-LHGYRVSYRDG--VMESEPKACAAVKGTQIMVEN 58
GFRGEALA++ + + K + + ++ G + E A GT + V N
Sbjct: 91 GFRGEALANIADMASAVEISSKKNRTMKTFVKLFQSGKALKACEADVTRASAGTTVTVYN 150
Query: 59 LFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
LFY + RRK + + + K+ + +++ H ++SFS R + + T
Sbjct: 151 LFYQLPVRRKCMDPRLE-FEKVRQRIEALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCS 209
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECA 178
+YG+ + L ++ + +Y + F++ GY+S+ + K LFVN RLV
Sbjct: 210 RFCQIYGLGKSQKLREI-SFKYKE-----FELSGYISSEAHY-NKNMQFLFVNKRLVLRT 262
Query: 179 PLKRAVEIVYAATF----PK--------------ASKPFIYMSIVLPPE----HVDVNVH 216
L + ++ + PK S P +Y V+ + DV +
Sbjct: 263 KLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRHRSTPELYGIYVINVQCQFCEYDVCME 322
Query: 217 PTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSG 276
P K + N + ++ IQ V++ L+Q ++ VE S S+D +
Sbjct: 323 PAKTLIEFQNWDTLLFCIQEGVKMFLKQ-------EKLFVELSGEDIKEFSEDNGFSLFD 375
Query: 277 SKLQKVPVNKMVRTDSSDPAGR-LHAY----VQSKP--HTSVASGPNLSAVRSSVRQRRN 329
+ LQK V R++ + L +Y +QSK + A N + R S R+N
Sbjct: 376 ATLQK-RVTSDERSNFQEACNNILDSYEMFNLQSKAVKRKTTAENVNTQSSRDSEATRKN 434
Query: 330 LNE 332
N+
Sbjct: 435 TND 437
>UNIPROTKB|Q9UHC1 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005712 "chiasma"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=NAS;IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=NAS;IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003696 "satellite
DNA binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0016887 GO:GO:0006298
GO:GO:0019237 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697
EMBL:AL049780 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
MIM:114500 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0007130 Orphanet:144 GO:GO:0003696 GO:GO:0007144
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AF195657 EMBL:AF195658
EMBL:AB039667 EMBL:AY963685 EMBL:L40399 IPI:IPI00005811
IPI:IPI00218050 RefSeq:NP_001035197.1 UniGene:Hs.436650
ProteinModelPortal:Q9UHC1 SMR:Q9UHC1 IntAct:Q9UHC1 STRING:Q9UHC1
PhosphoSite:Q9UHC1 DMDM:13878584 PaxDb:Q9UHC1 PRIDE:Q9UHC1
DNASU:27030 Ensembl:ENST00000238662 Ensembl:ENST00000355774
Ensembl:ENST00000556740 GeneID:27030 KEGG:hsa:27030 UCSC:uc001xrd.1
UCSC:uc001xre.1 CTD:27030 GeneCards:GC14M075481 HGNC:HGNC:7128
MIM:604395 MIM:614385 neXtProt:NX_Q9UHC1 PharmGKB:PA30845
HOGENOM:HOG000140944 HOVERGEN:HBG006375 InParanoid:Q9UHC1 KO:K08739
OMA:HGAIKFN PhylomeDB:Q9UHC1 ChiTaRS:MLH3 GenomeRNAi:27030
NextBio:49558 ArrayExpress:Q9UHC1 Bgee:Q9UHC1 CleanEx:HS_MLH3
Genevestigator:Q9UHC1 GermOnline:ENSG00000119684 Uniprot:Q9UHC1
Length = 1453
Score = 150 (57.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 84/363 (23%), Positives = 149/363 (41%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGH-LHGYRVSYRDG--VMESEPKACAAVKGTQIMVEN 58
GFRGEALA++ + + K + + ++ G + E A GT + V N
Sbjct: 91 GFRGEALANIADMASAVEISSKKNRTMKTFVKLFQSGKALKACEADVTRASAGTTVTVYN 150
Query: 59 LFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
LFY + RRK + + + K+ + +++ H ++SFS R + + T
Sbjct: 151 LFYQLPVRRKCMDPRLE-FEKVRQRIEALSLMHPSISFSLRNDVSGSMVLQLPKTKDVCS 209
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECA 178
+YG+ + L ++ + +Y + F++ GY+S+ + K LFVN RLV
Sbjct: 210 RFCQIYGLGKSQKLREI-SFKYKE-----FELSGYISSEAHY-NKNMQFLFVNKRLVLRT 262
Query: 179 PLKRAVEIVYAATF----PK--------------ASKPFIYMSIVLPPE----HVDVNVH 216
L + ++ + PK S P +Y V+ + DV +
Sbjct: 263 KLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRHRSTPELYGIYVINVQCQFCEYDVCME 322
Query: 217 PTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSG 276
P K + N + ++ IQ V++ L+Q ++ VE S S+D +
Sbjct: 323 PAKTLIEFQNWDTLLFCIQEGVKMFLKQ-------EKLFVELSGEDIKEFSEDNGFSLFD 375
Query: 277 SKLQKVPVNKMVRTDSSDPAGR-LHAY----VQSKP--HTSVASGPNLSAVRSSVRQRRN 329
+ LQK V R++ + L +Y +QSK + A N + R S R+N
Sbjct: 376 ATLQK-RVTSDERSNFQEACNNILDSYEMFNLQSKAVKRKTTAENVNTQSSRDSEATRKN 434
Query: 330 LNE 332
N+
Sbjct: 435 TND 437
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 74/314 (23%), Positives = 135/314 (42%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSYRDGVMESEPKACAAVKGTQIMVENLFY 61
GFRGEALAS+ + +TV T KG +++ Y + + KGT + + +LF
Sbjct: 95 GFRGEALASICAMASLTVITTQKGP-KAHKLEYDSHGRLVKKTVTSRNKGTTVQLRHLFN 153
Query: 62 NMIARRKT-LQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD-- 118
NM R+K ++N + K V LL A+ N S AA + ++T R D
Sbjct: 154 NMPVRKKEFVRNFKKQFGKCVTLLQSYALLSENCRLSIFNVNAAGSKSLLLSTPGRNDIS 213
Query: 119 -SIRTVYGVSVASNL----VQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDR 173
+I TV+G L + L+ +EY + + D + ++++ + + +++
Sbjct: 214 KNILTVFGSDGMHGLQKVGLHLDLNEYKEKMLKKYSEDSTLDDADH---RIAVTGYISRA 270
Query: 174 LVECAPLKRAVEIVYA----ATFPKASKPF--IYMS---IVLPPEHVDVNVHPTKREVSL 224
C + + +Y +P+ K IY S + P ++ + P +V++
Sbjct: 271 SFGCGRSGKDRQFIYINKRPVDYPQVLKCCNDIYRSFNNVQYPVIILNFELSPQFVDVNV 330
Query: 225 L-NQELIVEKIQSAVELKLRQSNDSRTYKEQTV---ESSPSSPYNPSKDLHLNPSGSKLQ 280
++ ++ + V L + D + EQ + +S PS P P +D L KL
Sbjct: 331 TPDKRTVLLHNEEYVLQSLAEKLDGH-FNEQELMLPKSLPSLPV-PHQDSELKVKRRKL- 387
Query: 281 KVPVNKMVRTDSSD 294
VP +++ T D
Sbjct: 388 -VPSQELIGTFEDD 400
>UNIPROTKB|H0Y5L7 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR014721 EMBL:AC006583
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AC011816
HGNC:HGNC:7127 ChiTaRS:Mlh1 Ensembl:ENST00000447829 Uniprot:H0Y5L7
Length = 58
Score = 116 (45.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 114 SSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVN 171
+S +D+IR+++G +V+ L+++ + + FKM+GY+SN+NY KK +LF+N
Sbjct: 4 ASTVDNIRSIFGNAVSRELIEIGCED----KTLAFKMNGYISNANYSVKKCIFLLFIN 57
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+++ +G +++ P +GT + V+ L
Sbjct: 105 GFRGEALSSLCALSDVTISTCHTSAKVGTRLAFDHNGKIVQKTPHP--RPRGTTVSVQQL 162
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH-GAARAD--VHSIATSS 115
FY + R K Q N +Y K+V +L I + SC G R V + +SS
Sbjct: 163 FYTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSS 222
Query: 116 RLDSIRTVYGVSVASNL---VQLEASE 139
++I +V+G +L VQL S+
Sbjct: 223 VKENIGSVFGQKQLQSLIPFVQLPPSD 249
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 71/286 (24%), Positives = 132/286 (46%)
Query: 102 GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEAS-----EYNDSSSFV----FK 149
G + V + +SS ++I +V+G +L VQL S EY + + V F
Sbjct: 209 GRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFH 268
Query: 150 MDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVL 206
+ G++S+ + V + +T F+N R + A + R V VY + + PFI ++I +
Sbjct: 269 ISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHM-YNRHQYPFIVLNISV 327
Query: 207 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSR-TYKEQT---VESSPSS 262
E +D+NV P KR++ L ++L++ +++++ + + SN ++ T +Q +E
Sbjct: 328 DSECIDINVTPDKRQILLQEEKLLLAVLKTSL-IAMFDSNVNKLTVSQQPLLDIEGHVIK 386
Query: 263 PYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ---SKPHTSV--ASGPNL 317
+ D P K Q P + RT+ + + ++ S HT+ + GP
Sbjct: 387 THQAEMD---KPLAEK-QDSPA--LFRTEGEEKRAVTISRLRENFSLRHTTENRSRGPQT 440
Query: 318 SAVRS-SVRQRRNLNETADLTS--IQELIDDVDRNCHSGLLDIVRH 360
R S RQ+R++ L S + D + +C G ++VRH
Sbjct: 441 PESRQISPRQKRHIQLPGALHSPCTPRPVPDTN-SC--GPQEVVRH 483
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 141 (54.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/141 (26%), Positives = 74/141 (52%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHL-HGYRVSYR-DGVMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + H T+ T T+ ++ + G ++S + +GT + VENL
Sbjct: 97 GFRGEALSSLCALSHFTIVTCTQKEAPKATKLEFETSGKLKST-SVVSGQRGTTVSVENL 155
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSR-- 116
F ++ RR+ L+ N ++ K+V+LL++ A T+V F+ + + +T
Sbjct: 156 FKSLPVRRRELERNIKREWGKVVNLLNQYACIQTSVKFTVSQQPTKGKRMVLFSTKGNPT 215
Query: 117 -LDSIRTVYGVSVASNLVQLE 136
++I V+G+ + L+ ++
Sbjct: 216 TRENIINVFGIKTMTALIAMD 236
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 141 (54.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+++ +G +++ P +GT + V+ L
Sbjct: 136 GFRGEALSSLCALSDVTISTCHTSAKVGTRLAFDHNGKIVQKTPHP--RPRGTTVSVQQL 193
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH-GAARAD--VHSIATSS 115
FY + R K Q N +Y K+V +L I + SC G R V + +SS
Sbjct: 194 FYTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSS 253
Query: 116 RLDSIRTVYGVSVASNL---VQLEASE 139
++I +V+G +L VQL S+
Sbjct: 254 VKENIGSVFGQKQLQSLIPFVQLPPSD 280
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 71/286 (24%), Positives = 132/286 (46%)
Query: 102 GAARADVHSIATSSRLDSIRTVYGVSVASNL---VQLEAS-----EYNDSSSFV----FK 149
G + V + +SS ++I +V+G +L VQL S EY + + V F
Sbjct: 240 GRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFH 299
Query: 150 MDGYVSNSNY-VAKKTT--MVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSIVL 206
+ G++S+ + V + +T F+N R + A + R V VY + + PFI ++I +
Sbjct: 300 ISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHM-YNRHQYPFIVLNISV 358
Query: 207 PPEHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSR-TYKEQT---VESSPSS 262
E +D+NV P KR++ L ++L++ +++++ + + SN ++ T +Q +E
Sbjct: 359 DSECIDINVTPDKRQILLQEEKLLLAVLKTSL-IAMFDSNVNKLTVSQQPLLDIEGHVIK 417
Query: 263 PYNPSKDLHLNPSGSKLQKVPVNKMVRTDSSDPAGRLHAYVQ---SKPHTSV--ASGPNL 317
+ D P K Q P + RT+ + + ++ S HT+ + GP
Sbjct: 418 THQAEMD---KPLAEK-QDSPA--LFRTEGEEKRAVTISRLRENFSLRHTTENRSRGPQT 471
Query: 318 SAVRS-SVRQRRNLNETADLTS--IQELIDDVDRNCHSGLLDIVRH 360
R S RQ+R++ L S + D + +C G ++VRH
Sbjct: 472 PESRQISPRQKRHIQLPGALHSPCTPRPVPDTN-SC--GPQEVVRH 514
>RGD|1309227 [details] [associations]
symbol:Mlh3 "mutL homolog 3 (E. coli)" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=ISO;IBA] [GO:0001673
"male germ cell nucleus" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005712 "chiasma"
evidence=ISO;IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=ISO;IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007130
"synaptonemal complex assembly" evidence=IEA;ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007140 "male
meiosis" evidence=IEA;ISO] [GO:0007144 "female meiosis I"
evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0019237
"centromeric DNA binding" evidence=IEA;ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 RGD:1309227
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0016887
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 GO:GO:0003697
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0007130
EMBL:CH473982 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 CTD:27030
KO:K08739 GeneTree:ENSGT00550000074903 IPI:IPI00877366
RefSeq:NP_001101513.1 UniGene:Rn.119254 Ensembl:ENSRNOT00000033493
GeneID:314320 KEGG:rno:314320 UCSC:RGD:1309227 OrthoDB:EOG4K9BB9
NextBio:667464 Uniprot:D4ADG4
Length = 1442
Score = 143 (55.4 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 47/189 (24%), Positives = 87/189 (46%)
Query: 2 GFRGEALASMTYVGH-VTVTTITKGHLHGYRVSYRDG--VMESEPKACAAVKGTQIMVEN 58
GFRGEALAS+ + V +++ L + +++G + E GT + V N
Sbjct: 91 GFRGEALASIADMASAVEISSKKSTTLKTFVKMFQNGKALAAREADLTRPSVGTTVTVYN 150
Query: 59 LFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
LFY RRK++ + + K+ + +++ H ++SFS R + + T
Sbjct: 151 LFYQFPVRRKSMDPRLE-FEKVRQRVEALSLMHPSISFSLRNDVSGSMILQLPKTKDICS 209
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECA 178
+YG+ + L ++ +Y + F+ +GY+S+ + K LFVN RLV
Sbjct: 210 RFCQIYGLGKSQKLREIHY-KYKE-----FEFNGYISSEAHY-NKNMQFLFVNRRLVLRT 262
Query: 179 PLKRAVEIV 187
L + ++ +
Sbjct: 263 KLHKLIDFL 271
>UNIPROTKB|F1P0J4 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AADN02034562 EMBL:AADN02034563
IPI:IPI00590399 PRIDE:F1P0J4 Ensembl:ENSGALT00000003701
Uniprot:F1P0J4
Length = 916
Score = 145 (56.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 65/249 (26%), Positives = 113/249 (45%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGH-LHGYRVSYRDGVMESEPKACAAVKGTQIMVENLF 60
GFRGEAL S+ + V VTT T + V G + S+ K +GT + V LF
Sbjct: 91 GFRGEALGSICCISEVLVTTRTADDDISTQYVLDSSGHVTSQ-KPSHLGQGTTVTVLKLF 149
Query: 61 YNMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRL 117
N+ R++ T + ++ K+ DLL I + + + A + + S
Sbjct: 150 KNLPVRKQFYSTNRKCKEELKKVHDLLIAYGIIKPELRITFVHNKAVIWQKNRV--SDHK 207
Query: 118 DSIRTVYGVSVASNLVQL----EASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDR 173
+ +V G +V ++V E E N S F+ K + S ++ + + + + FVN R
Sbjct: 208 MACMSVLGTAVMGSMVPFQHCCEDPEIN-LSGFLPKAESDSSLTSLSSSERSFI-FVNSR 265
Query: 174 LVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLLNQELI 230
V ++ + Y+ K S P +++I +P VDVNV P K EV L +E +
Sbjct: 266 PVH----QKEILKYYSVLMQKDSTRLYPVFFLNITVPASAVDVNVTPDKTEVLLQYKESV 321
Query: 231 VEKIQSAVE 239
+ +++ ++
Sbjct: 322 LLAVENVLK 330
Score = 39 (18.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 538 KKRKPLKNPVDIERYPNDAGMAI 560
K+ LK D+ERY +A A+
Sbjct: 609 KQEYELKAARDLERYNREANKAM 631
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 220 REVSLLNQELIVEKIQSAVEL 240
R+ L+N +L VEK++ V L
Sbjct: 740 RKRLLMNHKLPVEKLEKPVVL 760
>UNIPROTKB|E1BNK2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:DAAA02029619 IPI:IPI00924115
Ensembl:ENSBTAT00000061421 ArrayExpress:E1BNK2 Uniprot:E1BNK2
Length = 1452
Score = 140 (54.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 48/192 (25%), Positives = 88/192 (45%)
Query: 2 GFRGEALASMTYVGH-VTVTTITKGHLHGYRVSYRDGVMESEPKACAA-----VKGTQIM 55
GFRGEALAS+ + V +++ + + +++G KAC A GT +
Sbjct: 91 GFRGEALASIADMASAVEISSKKNKSMKTFVKLFQNG---KALKACEADLTRPSAGTTVT 147
Query: 56 VENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSS 115
V NLFY + RRK + + + K+ + +++ H +SFS R + + T
Sbjct: 148 VYNLFYQLPVRRKCMDPRLE-FEKVRQRIEALSLMHPTISFSLRNDVSGSMVLQLPKTKD 206
Query: 116 RLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLV 175
+YG+ + L ++ +Y + F++ G++S+ + K LFVN RLV
Sbjct: 207 ICSRFCQIYGLGKSQKLREINF-KYKE-----FELTGFISSEAHY-NKNMQFLFVNKRLV 259
Query: 176 ECAPLKRAVEIV 187
L + ++ +
Sbjct: 260 LRTKLHKLIDFL 271
Score = 48 (22.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 39/146 (26%), Positives = 62/146 (42%)
Query: 320 VRSSVRQRRNLNETADLT-SIQELIDDVDRNCHSGLLDIVRHCSFIGMA-DDVYALLQHN 377
+ + V + L T +L+ ++ I D+N H DI C M +D Y Q
Sbjct: 770 LNTEVEENNTLEITTNLSPQVEADIPWKDKN-HLDNSDI---CEITTMKYNDSYGSCQPV 825
Query: 378 THMYLANVVSLSKE---LMYQLV--------LRRFAHFNAIQLS-DPAPLSELLMLALKE 425
HM+ + + SKE L Q++ L+ HFN+ L + +P S LA K
Sbjct: 826 NHMFSSEKLPFSKEDDCLEQQMLCLTESTVTLQELPHFNSKFLDVEKSPES----LASKL 881
Query: 426 EDLDVENSENDDLKEKIAEMNTELLK 451
L + SE + + + N ELL+
Sbjct: 882 SRL--KGSERETQRMDVNHFN-ELLQ 904
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 408 QLSDPAPLSELLMLALKEEDLDVENSENDDLKEKIAEMNTE 448
Q+ P LS +LM +++ D +N +E IA +E
Sbjct: 994 QIGSPDSLSRMLMSRVEDSTAD-QNGTCFQSEESIARTCSE 1033
>UNIPROTKB|E2QZJ2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019237 "centromeric DNA binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007140 "male
meiosis" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0006298 GO:GO:0019237
GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:AAEX03005855
Ensembl:ENSCAFT00000026947 Uniprot:E2QZJ2
Length = 1424
Score = 145 (56.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGH-LHGYRVSYRDGVMESEPKACAA-----VKGTQIM 55
GFRGEALAS+ + + K + + +++G KAC A GT +
Sbjct: 91 GFRGEALASIADMASAVEISSKKNRTMKTFVKLFQNG---KALKACEANLTRPSAGTTVT 147
Query: 56 VENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSS 115
V NLFY + RRK + + + K+ + +++ H ++SFS R + + T
Sbjct: 148 VYNLFYQLPVRRKCMDPRLE-FEKVRQRIEALSLMHPSISFSLRNDVSGSMVLQVPKTKD 206
Query: 116 RLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLV 175
+YG+ + L +++ +Y + F++ GY+S+ + K LFVN RLV
Sbjct: 207 VCSRFCQIYGLGKSQKLREIKF-KYKE-----FELSGYISSEAHY-NKNMQFLFVNKRLV 259
Query: 176 ECAPLKRAVEIV 187
L + ++ +
Sbjct: 260 LRTKLHKFIDFL 271
Score = 42 (19.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 234 IQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSK 278
++S+++ K ++S ++QT E S S K L L + S+
Sbjct: 458 MESSLQTKDSSCSESGILEQQTAEVSESGENEKHKKLCLELNSSE 502
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 209 EHVDVNVHPTKREVSLLNQELIVEKIQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPS- 267
E ++ KR+ ++ N+ E + ++ +++NDS Y ++V+ S S S
Sbjct: 405 EMFNIQSKAVKRKATIENRRN-TENSRDLEGIR-KKTNDSFLYNYESVDPSHSKVMESSL 462
Query: 268 --KDLHLNPSG 276
KD + SG
Sbjct: 463 QTKDSSCSESG 473
>UNIPROTKB|F1S2R6 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:CT737372
Ensembl:ENSSSCT00000002644 Uniprot:F1S2R6
Length = 1427
Score = 140 (54.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 49/193 (25%), Positives = 91/193 (47%)
Query: 2 GFRGEALASMTYVGH-VTVTTITKGHLHGYRVSYRDGVMESEPKACAA-----VKGTQIM 55
GFRGEALAS+ + V +++ + + +++G KAC A GT +
Sbjct: 91 GFRGEALASIADMASAVEISSRRNKSMKTFVKLFQNG---KALKACEADLTRPSAGTTVT 147
Query: 56 VENLFYNMIARRKTLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSS 115
V NLFY + RRK + + + K+ + +++ H +VSFS R + + T
Sbjct: 148 VYNLFYQLPVRRKCMDPRLE-FEKVRQRVEALSLMHPSVSFSLRNDVSGSMVLQLPKTKD 206
Query: 116 RLDSIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYVS-NSNYVAKKTTMVLFVNDRL 174
+YG+ + L ++ +Y + F+++G++S ++Y K LFVN RL
Sbjct: 207 ICSRFCQIYGLGKSQKLREINF-KYKE-----FELNGFISAEAHY--NKNMQFLFVNKRL 258
Query: 175 VECAPLKRAVEIV 187
+ L + ++ +
Sbjct: 259 ILRTKLHKLIDFL 271
Score = 45 (20.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 415 LSELLMLALKEEDLDVENSENDDLKE 440
+ E + + LK+E L VE S N+D+KE
Sbjct: 340 IQEGVKMFLKKEKLFVELS-NEDIKE 364
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 261 SSPYNPSKDLHLNPS 275
SSP+N ++H N S
Sbjct: 947 SSPFNKDSEMHSNNS 961
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 235 QSAVELKLRQSNDSRTYKEQTVESS-PSSPYNPSKD-LHLNPS 275
+S+++ + ++SR +++TVE+S P K L LN S
Sbjct: 458 ESSLQNEDSACSESRILEQETVEASEPGENEKDKKSCLELNSS 500
>UNIPROTKB|E9PC65 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00873522
ProteinModelPortal:E9PC65 SMR:E9PC65 Ensembl:ENST00000424307
UCSC:uc010zgb.1 ArrayExpress:E9PC65 Bgee:E9PC65 Uniprot:E9PC65
Length = 711
Score = 122 (48.0 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 57/247 (23%), Positives = 111/247 (44%)
Query: 6 EALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVENLFY 61
+A A+ V V +TT T + Y DG ++ +P +GT + LF
Sbjct: 34 DAGATSVDVKLVLITTRTAAD--NFSTQYVLDGSGHILSQKPSHLG--QGTTVTALRLFK 89
Query: 62 NMIARRK---TLQNSSDDYTKIVDLLSRMAIHHTNVSFSCRKHGAARADVHSIATSSRLD 118
N+ R++ T + D+ KI DLL I ++ H A S + ++
Sbjct: 90 NLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLRIVF-VHNKAVIWQKSRVSDHKM- 147
Query: 119 SIRTVYGVSVASNLVQLEASEYNDSSSFVFKMDGYV----SNSNYVAKKTT--MVLFVND 172
++ +V G +V +N+ E+ +Y+ S ++ + G++ ++ ++ + T +F+N
Sbjct: 148 ALMSVLGTAVMNNM---ESFQYHSEESQIY-LSGFLPKCDADHSFTSLSTPERSFIFINS 203
Query: 173 RLVECAPLKRAVEIVYAATFPKASK---PFIYMSIVLPPEHVDVNVHPTKREVSLLNQEL 229
R V + + + Y K S P ++ I +P VDVN+ P K +V L N+E
Sbjct: 204 RPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKES 263
Query: 230 IVEKIQS 236
++ +++
Sbjct: 264 VLIALEN 270
Score = 56 (24.8 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 18/83 (21%), Positives = 36/83 (43%)
Query: 375 QHNTHMYLANVVSLSKELMYQLVLRRFAHFNAIQLSDPAPLSELLMLALKEEDLDVENSE 434
+H L+N L + L Q+ RR + +Q+ P + L + K+ +D+E +
Sbjct: 604 KHKLKTSLSNQPKLDELLQSQIEKRRSQNIKMVQI--PFSMKNLKINFKKQNKVDLEEKD 661
Query: 435 NDDLKEKIAEMNTELLKQKAEML 457
L + + L+ K E++
Sbjct: 662 EPCLIHNLRFPDAWLMTSKTEVM 684
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 135 (52.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 52/173 (30%), Positives = 82/173 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+ + +G +++ P +GT + V+ L
Sbjct: 98 GFRGEALSSLCALSDVTISTCHTSVKVGTRLVFDHNGKILQKTPYP--RPRGTTVSVQQL 155
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSS 115
FY + R K Q N ++ K+V +L I V SC G + V + +SS
Sbjct: 156 FYTLPVRHKEFQRNIKKEFAKMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSS 215
Query: 116 RLDSIRTVYGVSVASNL---VQLEAS-----EYNDSSSF----VFKMDGYVSN 156
++I V+G +L VQL S EY S S +F + G+VS+
Sbjct: 216 MKENIGLVFGQKQLQSLIPFVQLPPSDSICEEYGLSCSQALHNLFCISGFVSH 268
Score = 41 (19.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 16/80 (20%), Positives = 31/80 (38%)
Query: 234 IQSAVELKLRQSNDSRTYKEQTVESSPSSPYNPSKDLHLNPSGSKLQKVPVN---KMVRT 290
+ S VE++ + S + + S+P + +PS D + K + + K+ T
Sbjct: 479 LMSRVEMEEDSGHGSASAGSEEASSTPETSSHPSTDRVASSPEDKFSQENMESREKLPET 538
Query: 291 DSSDPAGRLHAYVQSKPHTS 310
D + H + TS
Sbjct: 539 DHRLSGTKCHLNQEESSSTS 558
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 236 SAVELKLRQSNDSRT---YKEQTVESSPSSPYNPSKDLHLNPS 275
S + L Q S T + T SSP++ + + LNPS
Sbjct: 543 SGTKCHLNQEESSSTSGVLPQPTKLSSPNAKRFTKEGIPLNPS 585
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 129 (50.5 bits), Expect = 0.00013, P = 0.00013
Identities = 40/148 (27%), Positives = 71/148 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+ + +G +++ P +GT + V+ L
Sbjct: 105 GFRGEALSSLCALSDVTISTCHASAKVGTRLVFDHNGKILQKSPYP--RPRGTTVSVQQL 162
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSS 115
FY + R K Q N ++ K+V +L I + V +C G + V + +S
Sbjct: 163 FYTLPVRHKEFQRNIKKEFAKMVQVLHAYCIISSGVRVTCTNQVGQGKRQPVVSTSGGAS 222
Query: 116 RLDSIRTVYGVSVASNLVQLEASEYNDS 143
++I +V+G +L+ +DS
Sbjct: 223 IKENIGSVFGQKQLQSLISFVQLPPSDS 250
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 43/148 (29%), Positives = 70/148 (47%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + ++V T + G R+ Y DG + + P GT + ++ L
Sbjct: 102 GFRGEALSSLCALSDLSVVTCHESAQIGARLVYDHDGRLTQCVPHP--RQHGTTVTLQKL 159
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH-GAA-RADVHSIATSSR 116
F + R K Q N +Y+K++ +L I T V +C G R+ V + S+
Sbjct: 160 FSTLPVRHKEFQRNIKKEYSKMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNS 219
Query: 117 L-DSIRTVYGVSVASNLVQLEASEYNDS 143
+ D+I V+G +L+ NDS
Sbjct: 220 MRDNIGAVFGPKQLQSLIPFRQISPNDS 247
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 125 (49.1 bits), Expect = 0.00035, P = 0.00035
Identities = 35/148 (23%), Positives = 69/148 (46%)
Query: 93 NVSFSCRKHGAARADVHSIATSSRLDSIRTVYGVSVASNLVQLEASEYNDSSSFV----- 147
N+ S ++ + R ++ S+ + + + V V + +Y D F+
Sbjct: 200 NLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFKNRMLGKYTDDPDFLDLDYK 259
Query: 148 FKMDGYVSNSNYVA---KKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASKPFIYMSI 204
++ GY+S +++ K ++VN R VE + L + VY TF P +++++
Sbjct: 260 IRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYK-TFNNVQFPAVFLNL 318
Query: 205 VLPPEHVDVNVHPTKREVSLLNQELIVE 232
LP +DVNV P KR + L N+ +++
Sbjct: 319 ELPMSLIDVNVTPDKRVILLHNERAVID 346
>UNIPROTKB|Q3BDU3 [details] [associations]
symbol:PMS1 "Rhabdomyosarcoma antigen MU-RMS-40.10E"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 Pfam:PF00505 GO:GO:0005524 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 HOGENOM:HOG000039972
HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AY540751 IPI:IPI00916989
SMR:Q3BDU3 STRING:Q3BDU3 Ensembl:ENST00000450931 Uniprot:Q3BDU3
Length = 659
Score = 93 (37.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 30/95 (31%), Positives = 44/95 (46%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG---VMESEPKACAAVKGTQIMVE 57
GFRGEAL S+ + V +TT T + Y DG ++ +P +GT +
Sbjct: 91 GFRGEALGSICCIAEVLITTRTAAD--NFSTQYVLDGSGHILSQKPSHLG--QGTTVTAL 146
Query: 58 NLFYNMIARRK---TLQNSSDDYTKIVDLLSRMAI 89
LF N+ R++ T + D+ KI DLL I
Sbjct: 147 RLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181
Score = 78 (32.5 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 144 SSFVFKMDGYVSNSNYVAKKTTMVLFVNDRLVECAPLKRAVEIVYAATFPKASK---PFI 200
S F+ K D S ++ + + + F+N R V + + + Y K S P
Sbjct: 198 SGFLPKCDADHSFTSLSTPERSFI-FINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVF 256
Query: 201 YMSIVLPPEHVDVNVHPTKREVSLLNQELIVEKIQS 236
++ I +P VDVN+ P K +V L N+E ++ +++
Sbjct: 257 FLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALEN 292
Score = 40 (19.1 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 415 LSELLMLALKEEDLDVENSENDDLKEKIAEMNTELLKQKAEM 456
+ EL +EE L E DL+ ++M ++Q+++M
Sbjct: 566 IEELWKTLSEEEKLKYEEKATKDLERYNSQMK-RAIEQESQM 606
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+ + +G +++ P +GT + V+ L
Sbjct: 58 GFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYP--RPRGTTVSVQQL 115
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSS 115
F + R K Q N +Y K+V +L I + SC G + V + + S
Sbjct: 116 FSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPS 175
Query: 116 RLDSIRTVYGVSVASNL---VQLEAS-----EY----NDSSSFVFKMDGYVSNSNY 159
++I +V+G +L VQL S EY +D+ +F + G++S +
Sbjct: 176 IKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTH 231
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 2 GFRGEALASMTYVGHVTVTTITKGHLHGYRVSY-RDG-VMESEPKACAAVKGTQIMVENL 59
GFRGEAL+S+ + VT++T G R+ + +G +++ P +GT + V+ L
Sbjct: 105 GFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYP--RPRGTTVSVQQL 162
Query: 60 FYNMIARRKTLQ-NSSDDYTKIVDLLSRMAIHHTNVSFSCRKH---GAARADVHSIATSS 115
F + R K Q N +Y K+V +L I + SC G + V + + S
Sbjct: 163 FSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPS 222
Query: 116 RLDSIRTVYGVSVASNL---VQLEAS-----EY----NDSSSFVFKMDGYVSNSNY 159
++I +V+G +L VQL S EY +D+ +F + G++S +
Sbjct: 223 IKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTH 278
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 567 567 0.00079 120 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 105
No. of states in DFA: 613 (65 KB)
Total size of DFA: 298 KB (2155 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.43u 0.14s 58.57t Elapsed: 00:00:03
Total cpu time: 58.45u 0.15s 58.60t Elapsed: 00:00:03
Start: Tue May 21 04:24:07 2013 End: Tue May 21 04:24:10 2013
WARNINGS ISSUED: 1