Query 008400
Match_columns 567
No_of_seqs 542 out of 4315
Neff 9.2
Searched_HMMs 29240
Date Tue Mar 26 01:19:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008400.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008400hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jxv_A 70 kDa peptidyl-prolyl 100.0 5.6E-66 1.9E-70 527.2 28.5 355 27-383 1-355 (356)
2 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.9E-56 1E-60 474.2 45.8 387 151-553 29-422 (457)
3 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 2.7E-43 9.4E-48 374.4 21.4 375 35-504 29-407 (457)
4 1q1c_A FK506-binding protein 4 100.0 7.6E-40 2.6E-44 320.8 28.2 223 35-264 49-276 (280)
5 1p5q_A FKBP52, FK506-binding p 100.0 2.1E-37 7.2E-42 315.8 38.1 282 263-554 18-302 (336)
6 2if4_A ATFKBP42; FKBP-like, al 100.0 9E-38 3.1E-42 318.7 24.4 279 269-551 48-333 (338)
7 3jxv_A 70 kDa peptidyl-prolyl 100.0 7.7E-37 2.6E-41 311.9 27.1 220 35-261 125-354 (356)
8 1q1c_A FK506-binding protein 4 100.0 4E-36 1.4E-40 294.4 29.5 223 151-389 49-280 (280)
9 2if4_A ATFKBP42; FKBP-like, al 99.9 2.3E-26 7.8E-31 234.3 14.3 297 20-517 32-334 (338)
10 1yat_A FK506 binding protein; 99.9 5E-24 1.7E-28 180.2 15.3 111 33-144 2-113 (113)
11 3o5e_A Peptidyl-prolyl CIS-tra 99.9 6.7E-24 2.3E-28 186.8 15.3 111 35-145 33-143 (144)
12 3kz7_A FK506-binding protein 3 99.9 7.8E-24 2.7E-28 180.9 15.1 109 35-143 2-118 (119)
13 3o5q_A Peptidyl-prolyl CIS-tra 99.9 5.8E-24 2E-28 183.7 14.2 111 35-145 17-127 (128)
14 1r9h_A FKB-6, FK506 binding pr 99.9 7.6E-24 2.6E-28 184.5 14.2 112 35-146 12-123 (135)
15 2y78_A Peptidyl-prolyl CIS-tra 99.9 2.1E-23 7.2E-28 180.7 15.5 111 32-143 23-133 (133)
16 2f4e_A ATFKBP42; FKBP-like, al 99.9 2.7E-23 9.2E-28 189.5 16.7 129 19-148 31-163 (180)
17 2ppn_A FK506-binding protein 1 99.9 1.9E-23 6.5E-28 174.9 13.6 107 38-144 1-107 (107)
18 2lgo_A FKBP; infectious diseas 99.9 1.7E-23 5.7E-28 180.7 13.2 113 31-143 16-130 (130)
19 3b7x_A FK506-binding protein 6 99.9 6.9E-24 2.3E-28 184.5 10.0 125 19-144 6-133 (134)
20 4dip_A Peptidyl-prolyl CIS-tra 99.9 8.1E-23 2.8E-27 176.0 14.7 112 32-145 7-123 (125)
21 1jvw_A Macrophage infectivity 99.9 4.1E-23 1.4E-27 185.2 12.8 112 32-146 32-144 (167)
22 2lkn_A AH receptor-interacting 99.9 2.4E-23 8.4E-28 184.7 10.3 115 34-149 7-162 (165)
23 2vn1_A 70 kDa peptidylprolyl i 99.9 3.1E-22 1.1E-26 173.2 15.9 112 33-145 11-127 (129)
24 3oe2_A Peptidyl-prolyl CIS-tra 99.9 1.3E-22 4.6E-27 188.5 14.4 106 33-144 113-218 (219)
25 3uf8_A Ubiquitin-like protein 99.9 1.7E-22 5.9E-27 188.6 15.2 111 32-143 99-209 (209)
26 1fd9_A Protein (macrophage inf 99.9 2.4E-22 8.2E-27 187.2 14.8 111 32-145 101-211 (213)
27 1u79_A FKBP-type peptidyl-prol 99.9 9.6E-23 3.3E-27 176.2 10.9 111 32-143 7-128 (129)
28 2jwx_A FKBP38NTD, FK506-bindin 99.9 3.7E-22 1.3E-26 176.9 14.9 110 33-147 38-151 (157)
29 2awg_A 38 kDa FK-506 binding p 99.9 5.4E-22 1.8E-26 168.9 15.2 108 33-144 8-117 (118)
30 1q6h_A FKBP-type peptidyl-prol 99.9 9.9E-22 3.4E-26 184.3 15.1 108 33-144 117-224 (224)
31 2d9f_A FK506-binding protein 8 99.9 9.4E-22 3.2E-26 171.2 12.7 113 32-148 11-126 (135)
32 1p5q_A FKBP52, FK506-binding p 99.9 5.5E-22 1.9E-26 201.7 13.0 271 146-510 18-293 (336)
33 3rkv_A Putative peptidylprolyl 99.9 1.4E-21 4.8E-26 176.4 13.1 154 392-545 4-161 (162)
34 2pbc_A FK506-binding protein 2 99.8 9.8E-21 3.3E-25 156.8 12.0 96 51-146 4-99 (102)
35 3o5e_A Peptidyl-prolyl CIS-tra 99.8 4E-20 1.4E-24 162.7 15.1 116 262-382 25-142 (144)
36 1r9h_A FKB-6, FK506 binding pr 99.8 7.4E-20 2.5E-24 159.2 13.3 118 151-274 12-135 (135)
37 3o5q_A Peptidyl-prolyl CIS-tra 99.8 1.5E-19 5E-24 156.0 14.3 114 264-382 11-126 (128)
38 2f4e_A ATFKBP42; FKBP-like, al 99.8 1.5E-19 5.2E-24 164.7 15.2 127 269-399 48-179 (180)
39 2lkn_A AH receptor-interacting 99.8 3.2E-20 1.1E-24 164.6 9.6 86 268-355 8-96 (165)
40 3kz7_A FK506-binding protein 3 99.8 3.2E-19 1.1E-23 152.1 15.4 111 269-381 3-118 (119)
41 2fbn_A 70 kDa peptidylprolyl i 99.8 1.1E-18 3.6E-23 163.0 19.8 179 372-550 11-190 (198)
42 4gco_A Protein STI-1; structur 99.8 6.4E-19 2.2E-23 152.2 13.8 114 397-525 11-124 (126)
43 3b7x_A FK506-binding protein 6 99.8 3.5E-19 1.2E-23 154.7 10.2 115 262-382 18-133 (134)
44 2awg_A 38 kDa FK-506 binding p 99.8 2.2E-18 7.6E-23 146.5 14.9 111 263-382 6-117 (118)
45 2vn1_A 70 kDa peptidylprolyl i 99.8 2.7E-18 9.1E-23 148.4 15.3 115 264-383 10-127 (129)
46 2hr2_A Hypothetical protein; a 99.8 5.7E-19 1.9E-23 156.2 11.1 139 394-535 6-155 (159)
47 1yat_A FK506 binding protein; 99.8 3.6E-18 1.2E-22 144.1 15.0 108 269-381 5-112 (113)
48 2ppn_A FK506-binding protein 1 99.8 2.3E-18 7.8E-23 143.9 13.5 106 271-381 1-106 (107)
49 2jwx_A FKBP38NTD, FK506-bindin 99.8 2.7E-18 9.3E-23 152.0 14.2 114 264-385 37-151 (157)
50 4dip_A Peptidyl-prolyl CIS-tra 99.8 3.6E-18 1.2E-22 146.8 13.0 114 267-384 9-124 (125)
51 2d9f_A FK506-binding protein 8 99.8 3.4E-18 1.2E-22 148.6 11.8 121 263-391 10-131 (135)
52 1jvw_A Macrophage infectivity 99.8 9.3E-18 3.2E-22 150.4 14.6 121 268-397 35-155 (167)
53 2y78_A Peptidyl-prolyl CIS-tra 99.8 1.2E-17 4.1E-22 144.5 14.4 109 267-381 25-133 (133)
54 4dt4_A FKBP-type 16 kDa peptid 99.8 9.4E-19 3.2E-23 156.1 7.6 132 52-192 24-158 (169)
55 2lgo_A FKBP; infectious diseas 99.8 1.3E-17 4.4E-22 143.8 14.2 105 272-381 26-130 (130)
56 2kr7_A FKBP-type peptidyl-prol 99.7 5E-18 1.7E-22 149.9 11.8 131 51-192 5-139 (151)
57 1ihg_A Cyclophilin 40; ppiase 99.7 1.5E-17 5.3E-22 170.9 16.8 155 391-545 215-370 (370)
58 3prb_A FKBP-type peptidyl-prol 99.7 1.1E-18 3.7E-23 163.4 6.8 168 53-232 2-190 (231)
59 3pr9_A FKBP-type peptidyl-prol 99.7 1.3E-18 4.5E-23 153.8 6.1 129 53-193 2-144 (157)
60 3oe2_A Peptidyl-prolyl CIS-tra 99.7 2.7E-17 9.4E-22 152.8 14.8 104 268-382 115-218 (219)
61 3uf8_A Ubiquitin-like protein 99.7 4.4E-17 1.5E-21 152.0 16.0 122 254-381 88-209 (209)
62 1ix5_A FKBP; ppiase, isomerase 99.7 8.9E-19 3E-23 154.7 2.9 131 52-192 1-144 (151)
63 1u79_A FKBP-type peptidyl-prol 99.7 1.4E-17 4.9E-22 143.7 9.7 109 151-260 10-128 (129)
64 2kfw_A FKBP-type peptidyl-prol 99.7 1.3E-17 4.6E-22 152.5 8.7 130 53-192 3-134 (196)
65 2k8i_A SLYD, peptidyl-prolyl C 99.7 4.9E-17 1.7E-21 145.9 11.1 134 53-196 3-138 (171)
66 1fd9_A Protein (macrophage inf 99.7 1.7E-16 6E-21 147.6 14.2 109 267-383 103-211 (213)
67 2pbc_A FK506-binding protein 2 99.7 9.6E-17 3.3E-21 132.7 10.0 91 167-262 4-98 (102)
68 1q6h_A FKBP-type peptidyl-prol 99.7 6.5E-16 2.2E-20 144.8 14.9 105 268-381 119-223 (224)
69 4gcn_A Protein STI-1; structur 99.7 3.3E-16 1.1E-20 135.2 11.4 115 395-525 4-125 (127)
70 3upv_A Heat shock protein STI1 99.7 6.4E-16 2.2E-20 132.6 12.1 116 398-528 3-124 (126)
71 3cgm_A SLYD, peptidyl-prolyl C 99.6 1.9E-16 6.3E-21 140.4 7.3 128 53-195 3-133 (158)
72 1hxv_A Trigger factor; FKBP fo 99.6 2.3E-16 8E-21 132.0 7.0 85 51-143 28-112 (113)
73 3sz7_A HSC70 cochaperone (SGT) 99.6 6.4E-15 2.2E-19 132.7 12.8 121 397-532 9-131 (164)
74 3gyz_A Chaperone protein IPGC; 99.6 8.7E-15 3E-19 130.2 13.0 105 397-516 34-138 (151)
75 2xcb_A PCRH, regulatory protei 99.6 2.4E-14 8.2E-19 125.8 12.7 122 397-533 16-137 (142)
76 2vgx_A Chaperone SYCD; alterna 99.6 2E-14 6.7E-19 127.5 11.9 119 397-530 19-137 (148)
77 4ga2_A E3 SUMO-protein ligase 99.5 2.8E-14 9.6E-19 126.8 11.4 115 397-526 29-144 (150)
78 3q49_B STIP1 homology and U bo 99.5 3.1E-14 1.1E-18 123.4 10.8 120 399-533 9-133 (137)
79 4ga2_A E3 SUMO-protein ligase 99.5 2.6E-14 9E-19 127.0 9.5 127 405-546 3-129 (150)
80 1a17_A Serine/threonine protei 99.5 1E-12 3.5E-17 117.4 17.7 124 392-530 6-129 (166)
81 3urz_A Uncharacterized protein 99.5 4.4E-13 1.5E-17 125.8 15.1 131 399-529 4-135 (208)
82 1elw_A TPR1-domain of HOP; HOP 99.5 4.4E-13 1.5E-17 112.0 12.2 114 398-526 3-116 (118)
83 1hxv_A Trigger factor; FKBP fo 99.4 2.2E-13 7.4E-18 113.9 9.1 82 167-260 28-112 (113)
84 4gyw_A UDP-N-acetylglucosamine 99.4 4.9E-13 1.7E-17 148.4 14.8 137 397-533 7-162 (723)
85 2xev_A YBGF; tetratricopeptide 99.4 1E-12 3.6E-17 112.3 13.3 118 399-528 2-122 (129)
86 2vyi_A SGTA protein; chaperone 99.4 1.6E-12 5.4E-17 110.6 13.5 122 393-529 6-127 (131)
87 2dba_A Smooth muscle cell asso 99.4 8.3E-13 2.8E-17 115.5 12.0 117 398-526 27-143 (148)
88 1hxi_A PEX5, peroxisome target 99.4 3.5E-13 1.2E-17 115.0 8.7 102 400-516 18-119 (121)
89 2lni_A Stress-induced-phosphop 99.4 8.6E-13 2.9E-17 113.0 11.0 115 398-527 15-129 (133)
90 1elr_A TPR2A-domain of HOP; HO 99.4 1.7E-12 5.7E-17 110.6 11.6 118 398-531 3-127 (131)
91 4dt4_A FKBP-type 16 kDa peptid 99.4 7E-12 2.4E-16 111.7 15.5 81 168-261 24-108 (169)
92 2kr7_A FKBP-type peptidyl-prol 99.4 1.2E-12 4.1E-17 115.3 10.5 81 167-260 5-89 (151)
93 2pl2_A Hypothetical conserved 99.4 1.3E-12 4.5E-17 123.5 10.7 94 450-545 75-179 (217)
94 4gyw_A UDP-N-acetylglucosamine 99.4 1.4E-12 4.9E-17 144.7 12.6 116 400-515 44-178 (723)
95 4i17_A Hypothetical protein; T 99.4 3.7E-12 1.3E-16 120.8 13.4 104 400-518 8-112 (228)
96 3pr9_A FKBP-type peptidyl-prol 99.4 7.9E-12 2.7E-16 110.3 14.3 79 169-261 2-97 (157)
97 1zu2_A Mitochondrial import re 99.4 7.7E-13 2.6E-17 116.6 7.7 104 409-527 12-136 (158)
98 2c2l_A CHIP, carboxy terminus 99.4 2.6E-12 8.9E-17 126.7 12.2 102 399-515 4-105 (281)
99 2k8i_A SLYD, peptidyl-prolyl C 99.4 2E-11 6.9E-16 109.4 16.5 80 169-261 3-85 (171)
100 2kfw_A FKBP-type peptidyl-prol 99.3 1.7E-12 5.8E-17 118.7 8.6 80 169-261 3-85 (196)
101 1wao_1 Serine/threonine protei 99.3 3.2E-12 1.1E-16 135.8 11.6 120 396-530 3-122 (477)
102 3prb_A FKBP-type peptidyl-prol 99.3 2.7E-11 9.2E-16 113.3 15.5 79 169-261 2-97 (231)
103 2h6f_A Protein farnesyltransfe 99.3 4.7E-12 1.6E-16 130.3 11.4 131 398-528 96-246 (382)
104 1ix5_A FKBP; ppiase, isomerase 99.3 4.2E-12 1.5E-16 111.8 9.3 80 169-261 2-98 (151)
105 2h6f_A Protein farnesyltransfe 99.3 5.8E-12 2E-16 129.6 11.9 132 399-530 131-288 (382)
106 3k9i_A BH0479 protein; putativ 99.3 2E-12 6.8E-17 109.3 6.9 98 412-521 3-100 (117)
107 2pl2_A Hypothetical conserved 99.3 1.3E-11 4.5E-16 116.6 13.1 135 399-534 39-203 (217)
108 3vtx_A MAMA; tetratricopeptide 99.3 1.9E-11 6.5E-16 111.6 13.8 147 399-546 5-170 (184)
109 1na0_A Designed protein CTPR3; 99.3 3.6E-11 1.2E-15 101.1 14.1 114 399-527 9-122 (125)
110 1w26_A Trigger factor, TF; cha 99.3 3.5E-12 1.2E-16 132.3 7.8 99 51-157 156-254 (432)
111 4gco_A Protein STI-1; structur 99.3 3.8E-11 1.3E-15 103.0 12.7 102 446-548 11-112 (126)
112 2kck_A TPR repeat; tetratricop 99.3 1.5E-11 5E-16 101.6 9.6 102 399-515 6-110 (112)
113 3cgm_A SLYD, peptidyl-prolyl C 99.3 8.1E-11 2.8E-15 104.1 14.6 78 169-261 3-80 (158)
114 3vtx_A MAMA; tetratricopeptide 99.3 5E-11 1.7E-15 108.8 13.9 118 399-516 39-175 (184)
115 3urz_A Uncharacterized protein 99.3 3.4E-11 1.2E-15 112.9 12.7 106 404-525 59-199 (208)
116 2e2e_A Formate-dependent nitri 99.3 4.3E-11 1.5E-15 108.6 12.7 112 399-525 44-158 (177)
117 4i17_A Hypothetical protein; T 99.2 5.2E-11 1.8E-15 112.8 13.2 117 401-532 44-169 (228)
118 3gyz_A Chaperone protein IPGC; 99.2 3.1E-12 1.1E-16 113.6 4.1 99 448-547 36-134 (151)
119 1hh8_A P67PHOX, NCF-2, neutrop 99.2 4.3E-11 1.5E-15 111.8 12.2 131 397-546 4-150 (213)
120 3ieg_A DNAJ homolog subfamily 99.2 1.8E-10 6E-15 115.9 16.2 122 400-532 235-356 (359)
121 1xnf_A Lipoprotein NLPI; TPR, 99.2 3.3E-10 1.1E-14 109.7 15.5 114 397-525 41-154 (275)
122 3uq3_A Heat shock protein STI1 99.2 1.1E-10 3.8E-15 111.7 11.8 117 399-530 105-221 (258)
123 1t11_A Trigger factor, TF; hel 99.2 1.1E-11 3.8E-16 126.8 4.8 101 51-159 159-259 (392)
124 2fo7_A Synthetic consensus TPR 99.2 2.9E-10 9.8E-15 96.6 12.4 129 401-545 3-131 (136)
125 2yhc_A BAMD, UPF0169 lipoprote 99.2 4.3E-10 1.5E-14 106.6 14.9 111 399-521 4-135 (225)
126 2vsy_A XCC0866; transferase, g 99.2 1.4E-10 4.9E-15 125.9 13.0 132 399-546 23-157 (568)
127 3qky_A Outer membrane assembly 99.2 4.5E-10 1.5E-14 108.8 15.2 139 399-549 52-227 (261)
128 3qky_A Outer membrane assembly 99.1 1.3E-10 4.4E-15 112.6 10.9 110 399-520 15-135 (261)
129 3as5_A MAMA; tetratricopeptide 99.1 6.7E-10 2.3E-14 100.2 14.7 132 399-546 42-173 (186)
130 4abn_A Tetratricopeptide repea 99.1 1.8E-10 6.1E-15 122.3 12.4 121 400-535 171-311 (474)
131 1hh8_A P67PHOX, NCF-2, neutrop 99.1 1.6E-10 5.6E-15 107.8 10.7 103 399-516 37-155 (213)
132 2pzi_A Probable serine/threoni 99.1 3.6E-11 1.2E-15 133.5 7.3 126 399-525 433-577 (681)
133 4abn_A Tetratricopeptide repea 99.1 2.7E-10 9.2E-15 120.9 12.7 131 399-546 102-250 (474)
134 3u4t_A TPR repeat-containing p 99.1 4.9E-10 1.7E-14 108.5 13.4 131 401-545 39-170 (272)
135 2vgx_A Chaperone SYCD; alterna 99.1 7.3E-11 2.5E-15 104.3 6.8 100 448-548 21-120 (148)
136 2l6j_A TPR repeat-containing p 99.1 1.9E-11 6.4E-16 101.3 2.6 93 399-506 4-102 (111)
137 3uq3_A Heat shock protein STI1 99.1 6.2E-10 2.1E-14 106.4 13.3 123 399-545 79-201 (258)
138 2e2e_A Formate-dependent nitri 99.1 7.5E-11 2.6E-15 107.0 6.5 133 400-548 11-146 (177)
139 2pzi_A Probable serine/threoni 99.1 1.2E-10 4.1E-15 129.3 9.0 87 447-534 466-552 (681)
140 2kat_A Uncharacterized protein 99.1 5.9E-10 2E-14 93.4 11.1 94 417-525 3-98 (115)
141 2y4t_A DNAJ homolog subfamily 99.1 1.5E-09 5.2E-14 113.3 16.8 121 400-531 258-378 (450)
142 3as5_A MAMA; tetratricopeptide 99.1 5.3E-10 1.8E-14 100.9 11.1 132 398-545 7-138 (186)
143 1qqe_A Vesicular transport pro 99.1 9E-10 3.1E-14 108.9 13.4 112 397-517 75-193 (292)
144 1fch_A Peroxisomal targeting s 99.1 4.5E-10 1.5E-14 113.9 11.4 120 400-534 218-348 (368)
145 3qou_A Protein YBBN; thioredox 99.1 7.7E-10 2.6E-14 109.2 12.6 130 399-544 117-282 (287)
146 4gcn_A Protein STI-1; structur 99.1 5E-10 1.7E-14 96.0 9.8 70 447-516 7-76 (127)
147 2q7f_A YRRB protein; TPR, prot 99.1 1.2E-09 4.2E-14 103.5 13.5 129 400-528 58-205 (243)
148 2yhc_A BAMD, UPF0169 lipoprote 99.1 1.7E-09 5.8E-14 102.4 14.4 132 400-544 42-211 (225)
149 2ho1_A Type 4 fimbrial biogene 99.1 8.6E-10 3E-14 105.5 12.4 132 401-546 107-238 (252)
150 2r5s_A Uncharacterized protein 99.1 5.7E-10 1.9E-14 101.3 10.6 81 465-546 91-173 (176)
151 3mkr_A Coatomer subunit epsilo 99.1 1.4E-09 4.9E-14 107.5 14.2 115 400-531 131-249 (291)
152 3u4t_A TPR repeat-containing p 99.1 1.1E-09 3.8E-14 106.0 13.1 117 399-530 74-190 (272)
153 3ieg_A DNAJ homolog subfamily 99.0 1.2E-09 4E-14 109.8 13.4 110 399-523 3-115 (359)
154 1hxi_A PEX5, peroxisome target 99.0 3E-09 1E-13 90.3 13.9 94 451-545 20-113 (121)
155 3upv_A Heat shock protein STI1 99.0 1.8E-09 6.1E-14 91.8 12.6 99 448-547 4-102 (126)
156 4eqf_A PEX5-related protein; a 99.0 5.3E-10 1.8E-14 113.6 10.9 99 401-514 215-313 (365)
157 2q7f_A YRRB protein; TPR, prot 99.0 1E-09 3.6E-14 104.0 12.1 80 448-527 159-238 (243)
158 2gw1_A Mitochondrial precursor 99.0 9E-10 3.1E-14 116.9 12.8 106 395-516 2-107 (514)
159 1qqe_A Vesicular transport pro 99.0 1.1E-09 3.6E-14 108.4 12.3 112 398-518 116-235 (292)
160 4eqf_A PEX5-related protein; a 99.0 6.4E-10 2.2E-14 113.0 10.8 130 404-547 182-311 (365)
161 2ho1_A Type 4 fimbrial biogene 99.0 1.9E-09 6.4E-14 103.2 13.3 128 401-544 73-202 (252)
162 3fp2_A TPR repeat-containing p 99.0 9.3E-10 3.2E-14 117.7 12.2 115 387-517 13-127 (537)
163 2l6j_A TPR repeat-containing p 99.0 2.4E-09 8.4E-14 88.3 12.0 67 449-515 5-71 (111)
164 2vq2_A PILW, putative fimbrial 99.0 2.4E-09 8E-14 100.0 13.2 97 449-546 77-176 (225)
165 2vq2_A PILW, putative fimbrial 99.0 2.9E-09 9.8E-14 99.4 13.8 118 402-532 79-198 (225)
166 1na3_A Designed protein CTPR2; 99.0 4.1E-09 1.4E-13 83.5 12.3 80 448-527 9-88 (91)
167 3u3w_A Transcriptional activat 99.0 2.3E-09 7.7E-14 105.9 13.0 146 399-553 115-273 (293)
168 2y4t_A DNAJ homolog subfamily 99.0 3.9E-09 1.3E-13 110.2 15.4 112 397-523 24-138 (450)
169 2fo7_A Synthetic consensus TPR 99.0 2.3E-09 7.8E-14 90.9 11.1 101 400-515 36-136 (136)
170 2xcb_A PCRH, regulatory protei 99.0 4E-09 1.4E-13 92.0 12.8 100 448-548 18-117 (142)
171 1fch_A Peroxisomal targeting s 99.0 6.3E-09 2.2E-13 105.3 16.1 148 399-547 132-315 (368)
172 2hr2_A Hypothetical protein; a 99.0 3.8E-09 1.3E-13 93.2 12.1 100 448-548 11-133 (159)
173 3cv0_A Peroxisome targeting si 99.0 2.2E-09 7.6E-14 106.4 12.1 134 399-548 172-317 (327)
174 1w3b_A UDP-N-acetylglucosamine 99.0 2.2E-09 7.4E-14 110.1 12.3 145 399-544 169-332 (388)
175 3sz7_A HSC70 cochaperone (SGT) 99.0 4.4E-09 1.5E-13 94.0 12.8 99 447-546 10-108 (164)
176 3hym_B Cell division cycle pro 99.0 6.6E-09 2.3E-13 103.1 15.4 145 400-545 23-187 (330)
177 1w3b_A UDP-N-acetylglucosamine 99.0 2.8E-09 9.4E-14 109.3 12.8 146 399-545 135-299 (388)
178 3edt_B KLC 2, kinesin light ch 99.0 4E-09 1.4E-13 102.0 13.2 142 397-546 41-198 (283)
179 3ro3_A PINS homolog, G-protein 99.0 7.9E-09 2.7E-13 90.6 13.7 109 396-513 6-120 (164)
180 3hym_B Cell division cycle pro 99.0 4.3E-09 1.5E-13 104.5 13.0 133 399-547 90-223 (330)
181 3ma5_A Tetratricopeptide repea 98.9 5.5E-09 1.9E-13 85.3 10.5 68 448-515 7-74 (100)
182 1xnf_A Lipoprotein NLPI; TPR, 98.9 3.9E-09 1.3E-13 102.1 11.2 128 406-545 12-139 (275)
183 3n71_A Histone lysine methyltr 98.9 1.3E-08 4.3E-13 107.7 15.8 146 393-546 303-464 (490)
184 3mkr_A Coatomer subunit epsilo 98.9 5.3E-09 1.8E-13 103.4 11.6 97 410-521 177-274 (291)
185 4g1t_A Interferon-induced prot 98.9 6.2E-09 2.1E-13 109.5 12.3 125 399-529 51-185 (472)
186 2ifu_A Gamma-SNAP; membrane fu 98.9 6.7E-09 2.3E-13 103.4 11.8 108 398-516 115-228 (307)
187 3u3w_A Transcriptional activat 98.9 8.9E-09 3E-13 101.6 12.4 107 398-512 154-267 (293)
188 2kc7_A BFR218_protein; tetratr 98.9 8.1E-10 2.8E-14 89.6 3.9 69 451-519 3-72 (99)
189 3q49_B STIP1 homology and U bo 98.9 1.7E-08 5.7E-13 86.7 12.4 101 448-549 9-109 (137)
190 2kc7_A BFR218_protein; tetratr 98.9 1.1E-08 3.6E-13 82.9 10.4 60 448-515 34-94 (99)
191 2qfc_A PLCR protein; TPR, HTH, 98.9 2.8E-08 9.5E-13 98.0 15.2 136 401-545 117-265 (293)
192 3ulq_A Response regulator aspa 98.9 2.1E-08 7.2E-13 102.8 14.8 129 397-533 141-281 (383)
193 2gw1_A Mitochondrial precursor 98.9 1.6E-08 5.3E-13 107.2 14.3 117 401-526 374-493 (514)
194 2vsy_A XCC0866; transferase, g 98.9 5.5E-09 1.9E-13 113.4 10.7 119 412-546 2-120 (568)
195 3q15_A PSP28, response regulat 98.9 1.4E-08 5E-13 103.9 13.3 109 397-514 180-293 (378)
196 3ulq_A Response regulator aspa 98.9 1.2E-08 4.3E-13 104.4 12.5 109 396-513 181-295 (383)
197 1w26_A Trigger factor, TF; cha 98.9 5.1E-09 1.7E-13 108.6 9.5 85 167-262 156-242 (432)
198 3fp2_A TPR repeat-containing p 98.9 1.1E-08 3.8E-13 109.3 12.4 153 395-548 239-409 (537)
199 2ifu_A Gamma-SNAP; membrane fu 98.8 9.7E-09 3.3E-13 102.2 10.9 109 397-515 74-188 (307)
200 3cv0_A Peroxisome targeting si 98.8 4.8E-08 1.6E-12 96.7 15.7 147 399-546 89-269 (327)
201 1na3_A Designed protein CTPR2; 98.8 1.1E-08 3.8E-13 81.0 8.8 84 398-496 8-91 (91)
202 3rkv_A Putative peptidylprolyl 98.8 1.4E-08 4.7E-13 90.6 10.2 98 448-546 11-126 (162)
203 2kck_A TPR repeat; tetratricop 98.8 1.2E-08 4.3E-13 83.6 9.2 95 450-545 8-105 (112)
204 2xev_A YBGF; tetratricopeptide 98.8 2.9E-08 9.8E-13 84.2 10.8 98 451-549 5-108 (129)
205 1pc2_A Mitochondria fission pr 98.8 1.6E-08 5.5E-13 88.0 9.2 102 414-530 13-119 (152)
206 3gw4_A Uncharacterized protein 98.8 3.7E-08 1.3E-12 90.5 12.0 141 398-548 25-178 (203)
207 3q15_A PSP28, response regulat 98.8 5E-08 1.7E-12 99.8 14.2 143 396-547 138-291 (378)
208 1elw_A TPR1-domain of HOP; HOP 98.8 5.8E-08 2E-12 80.2 12.0 97 448-545 4-100 (118)
209 3edt_B KLC 2, kinesin light ch 98.8 3.5E-08 1.2E-12 95.2 12.3 109 396-511 82-198 (283)
210 2qfc_A PLCR protein; TPR, HTH, 98.8 2.8E-08 9.4E-13 98.0 11.7 107 398-512 154-267 (293)
211 3ro3_A PINS homolog, G-protein 98.8 4.2E-08 1.4E-12 85.9 11.6 108 398-514 48-161 (164)
212 4a1s_A PINS, partner of inscut 98.8 4.5E-08 1.6E-12 100.8 13.5 125 396-531 45-181 (411)
213 2lni_A Stress-induced-phosphop 98.8 5.8E-08 2E-12 82.3 11.9 98 448-546 16-113 (133)
214 3nf1_A KLC 1, kinesin light ch 98.8 4.4E-08 1.5E-12 96.2 12.4 142 397-546 67-224 (311)
215 2xpi_A Anaphase-promoting comp 98.8 5.2E-08 1.8E-12 105.6 14.0 133 399-547 373-505 (597)
216 3nf1_A KLC 1, kinesin light ch 98.7 8.3E-08 2.8E-12 94.2 13.7 109 397-512 109-225 (311)
217 3sf4_A G-protein-signaling mod 98.7 6.4E-08 2.2E-12 99.0 13.2 127 398-533 186-324 (406)
218 3qww_A SET and MYND domain-con 98.7 1.5E-07 5E-12 98.0 15.2 124 395-525 294-430 (433)
219 2xpi_A Anaphase-promoting comp 98.7 2.2E-07 7.4E-12 100.7 17.0 147 399-546 305-470 (597)
220 4a1s_A PINS, partner of inscut 98.7 4E-08 1.4E-12 101.2 9.9 143 398-550 222-376 (411)
221 2dba_A Smooth muscle cell asso 98.7 1.7E-07 5.7E-12 81.2 12.4 97 449-546 29-128 (148)
222 2vyi_A SGTA protein; chaperone 98.7 2.7E-07 9.3E-12 77.5 13.4 100 446-546 10-109 (131)
223 3ro2_A PINS homolog, G-protein 98.7 8.5E-08 2.9E-12 94.8 11.8 122 399-531 5-138 (338)
224 3ro2_A PINS homolog, G-protein 98.7 1.1E-07 3.7E-12 94.0 12.4 140 397-546 181-332 (338)
225 1a17_A Serine/threonine protei 98.7 2.5E-07 8.5E-12 81.8 13.4 99 447-546 12-110 (166)
226 2ond_A Cleavage stimulation fa 98.7 1.5E-07 5.2E-12 93.4 12.8 87 415-516 80-168 (308)
227 3qwp_A SET and MYND domain-con 98.7 3.4E-07 1.2E-11 95.2 15.9 127 396-529 284-423 (429)
228 2fbn_A 70 kDa peptidylprolyl i 98.6 3.6E-07 1.2E-11 84.2 14.2 98 447-545 37-150 (198)
229 2ond_A Cleavage stimulation fa 98.6 1.7E-07 5.9E-12 93.0 12.7 148 401-549 101-273 (308)
230 3sf4_A G-protein-signaling mod 98.6 1E-07 3.5E-12 97.5 11.3 122 399-531 9-142 (406)
231 1na0_A Designed protein CTPR3; 98.6 3.4E-07 1.2E-11 76.2 12.2 98 448-546 9-106 (125)
232 2c2l_A CHIP, carboxy terminus 98.6 1.9E-07 6.4E-12 91.6 11.9 96 449-545 5-100 (281)
233 1ouv_A Conserved hypothetical 98.6 3.2E-07 1.1E-11 88.9 13.4 75 449-527 75-157 (273)
234 1t11_A Trigger factor, TF; hel 98.6 1.4E-08 4.9E-13 103.8 3.7 85 167-262 159-245 (392)
235 1elr_A TPR2A-domain of HOP; HO 98.6 2.3E-07 7.9E-12 78.1 10.5 98 448-546 4-108 (131)
236 1wao_1 Serine/threonine protei 98.6 1.3E-08 4.4E-13 107.9 2.7 102 399-515 40-154 (477)
237 4g1t_A Interferon-induced prot 98.6 1.4E-07 4.8E-12 99.1 10.5 120 399-525 94-218 (472)
238 4f3v_A ESX-1 secretion system 98.6 4E-07 1.4E-11 88.4 12.6 109 401-523 137-248 (282)
239 1zu2_A Mitochondrial import re 98.5 2.5E-07 8.6E-12 81.4 9.5 88 459-546 13-120 (158)
240 1dce_A Protein (RAB geranylger 98.5 3.6E-07 1.2E-11 98.7 12.8 123 393-530 22-157 (567)
241 2v5f_A Prolyl 4-hydroxylase su 98.5 7.2E-07 2.5E-11 73.2 11.4 79 451-529 8-93 (104)
242 1dce_A Protein (RAB geranylger 98.5 6.3E-07 2.1E-11 96.8 13.9 116 399-529 63-191 (567)
243 3gw4_A Uncharacterized protein 98.5 8.1E-07 2.8E-11 81.4 12.8 110 396-513 63-178 (203)
244 3rjv_A Putative SEL1 repeat pr 98.5 4E-07 1.4E-11 85.1 10.8 128 399-527 18-173 (212)
245 3k9i_A BH0479 protein; putativ 98.5 1.3E-07 4.4E-12 79.3 6.0 87 460-547 2-91 (117)
246 1ouv_A Conserved hypothetical 98.5 1.3E-06 4.3E-11 84.7 14.0 93 448-545 110-214 (273)
247 1ihg_A Cyclophilin 40; ppiase 98.5 4.1E-07 1.4E-11 93.0 10.6 96 450-546 225-336 (370)
248 3dra_A Protein farnesyltransfe 98.5 9E-07 3.1E-11 87.6 12.1 120 410-544 43-173 (306)
249 2v5f_A Prolyl 4-hydroxylase su 98.5 8.9E-07 3E-11 72.7 10.0 83 399-489 5-87 (104)
250 3rjv_A Putative SEL1 repeat pr 98.4 4.8E-07 1.6E-11 84.6 9.0 110 406-528 18-137 (212)
251 3bee_A Putative YFRE protein; 98.4 1.1E-06 3.8E-11 70.4 9.9 69 449-517 7-78 (93)
252 3dra_A Protein farnesyltransfe 98.4 2E-06 6.8E-11 85.1 13.4 113 399-526 67-190 (306)
253 3q7a_A Farnesyltransferase alp 98.4 2.7E-06 9.3E-11 85.2 13.9 121 411-546 66-196 (349)
254 1hz4_A MALT regulatory protein 98.4 3.1E-06 1.1E-10 85.9 14.4 108 398-514 52-167 (373)
255 3dss_A Geranylgeranyl transfer 98.4 2.4E-06 8.2E-11 85.1 12.3 111 404-529 34-157 (331)
256 2r5s_A Uncharacterized protein 98.3 7.1E-07 2.4E-11 80.5 7.1 70 451-521 9-78 (176)
257 1nzn_A CGI-135 protein, fissio 98.3 3.4E-06 1.2E-10 70.7 9.8 103 413-530 15-122 (126)
258 3dss_A Geranylgeranyl transfer 98.3 1.1E-05 3.9E-10 80.3 15.3 100 415-529 90-192 (331)
259 1klx_A Cysteine rich protein B 98.3 4.4E-06 1.5E-10 72.3 10.9 96 405-521 31-134 (138)
260 3ma5_A Tetratricopeptide repea 98.3 1.3E-06 4.4E-11 70.9 6.7 80 399-493 7-88 (100)
261 4f3v_A ESX-1 secretion system 98.2 2.3E-06 7.9E-11 83.0 8.5 130 403-549 106-240 (282)
262 3qou_A Protein YBBN; thioredox 98.2 1.3E-06 4.5E-11 85.7 7.0 112 399-510 151-283 (287)
263 2kat_A Uncharacterized protein 98.2 6.9E-06 2.4E-10 68.1 10.3 80 466-546 3-82 (115)
264 2xm6_A Protein corresponding t 98.2 9.2E-06 3.2E-10 86.0 12.4 96 448-548 363-469 (490)
265 3n71_A Histone lysine methyltr 98.2 4.2E-06 1.4E-10 88.4 9.6 113 396-515 348-468 (490)
266 3q7a_A Farnesyltransferase alp 98.2 6.1E-06 2.1E-10 82.6 10.2 116 399-529 88-214 (349)
267 2ooe_A Cleavage stimulation fa 98.1 7.7E-06 2.6E-10 87.5 11.3 148 401-549 323-495 (530)
268 2ooe_A Cleavage stimulation fa 98.1 8.8E-06 3E-10 87.1 10.9 129 399-527 272-436 (530)
269 1hz4_A MALT regulatory protein 98.0 3.3E-05 1.1E-09 78.2 13.0 108 395-512 10-123 (373)
270 3gty_X Trigger factor, TF; cha 98.0 5.2E-06 1.8E-10 85.9 6.5 88 52-159 154-241 (433)
271 1xi4_A Clathrin heavy chain; a 97.9 4.7E-05 1.6E-09 87.5 13.1 107 401-530 1197-1328(1630)
272 3o48_A Mitochondria fission 1 97.9 5.1E-05 1.7E-09 63.6 10.0 82 449-530 41-126 (134)
273 1y8m_A FIS1; mitochondria, unk 97.9 9.9E-05 3.4E-09 62.7 11.7 81 449-529 40-124 (144)
274 1klx_A Cysteine rich protein B 97.9 6.2E-05 2.1E-09 64.9 10.4 94 412-528 8-105 (138)
275 1b89_A Protein (clathrin heavy 97.9 3.9E-05 1.3E-09 78.9 9.9 106 401-530 124-255 (449)
276 2xm6_A Protein corresponding t 97.8 0.00015 5E-09 76.7 13.8 93 399-510 39-143 (490)
277 1pc2_A Mitochondria fission pr 97.8 0.00013 4.4E-09 63.4 10.1 79 399-491 32-114 (152)
278 4b4t_Q 26S proteasome regulato 97.8 0.00015 5.2E-09 74.7 12.5 121 393-513 49-206 (434)
279 3e4b_A ALGK; tetratricopeptide 97.7 8.8E-05 3E-09 77.7 10.4 121 401-527 178-329 (452)
280 3u64_A Protein TP_0956; tetrat 97.7 0.00013 4.5E-09 70.1 10.6 86 416-514 180-272 (301)
281 4b4t_Q 26S proteasome regulato 97.7 0.00011 3.6E-09 75.9 10.7 64 448-511 95-164 (434)
282 3ffl_A Anaphase-promoting comp 97.7 0.00027 9.3E-09 61.7 10.9 117 401-525 22-164 (167)
283 3ly7_A Transcriptional activat 97.7 0.00036 1.2E-08 69.8 13.2 112 404-516 201-344 (372)
284 1xi4_A Clathrin heavy chain; a 97.6 0.00019 6.7E-09 82.6 11.1 107 404-515 1054-1167(1630)
285 3e4b_A ALGK; tetratricopeptide 97.6 0.00023 7.7E-09 74.6 10.8 74 448-527 283-365 (452)
286 3mv2_B Coatomer subunit epsilo 97.4 0.00029 9.8E-09 69.1 8.2 99 405-521 182-292 (310)
287 3mv2_B Coatomer subunit epsilo 97.3 0.00073 2.5E-08 66.3 8.9 121 402-536 103-231 (310)
288 3qwp_A SET and MYND domain-con 97.2 0.00078 2.7E-08 69.8 9.2 93 396-495 326-426 (429)
289 2ff4_A Probable regulatory pro 97.2 0.0054 1.9E-07 62.5 14.7 113 398-510 114-233 (388)
290 3bee_A Putative YFRE protein; 97.2 0.00062 2.1E-08 54.1 5.9 68 399-481 6-76 (93)
291 3qww_A SET and MYND domain-con 97.1 0.0011 3.8E-08 68.7 9.0 80 396-482 337-421 (433)
292 3u64_A Protein TP_0956; tetrat 97.1 0.00087 3E-08 64.4 7.1 66 463-528 178-251 (301)
293 1nzn_A CGI-135 protein, fissio 96.7 0.0083 2.8E-07 50.1 9.4 46 446-491 72-117 (126)
294 1b89_A Protein (clathrin heavy 96.7 0.0055 1.9E-07 62.9 10.0 143 392-534 141-300 (449)
295 3o48_A Mitochondria fission 1 96.6 0.016 5.4E-07 48.6 10.0 45 447-491 77-121 (134)
296 3ffl_A Anaphase-promoting comp 96.5 0.0095 3.2E-07 52.0 8.7 94 398-492 62-165 (167)
297 1y8m_A FIS1; mitochondria, unk 96.5 0.026 8.8E-07 47.9 11.0 44 447-490 76-119 (144)
298 3gty_X Trigger factor, TF; cha 96.5 0.0048 1.7E-07 63.6 8.0 72 168-262 154-227 (433)
299 4e6h_A MRNA 3'-END-processing 96.3 0.063 2.1E-06 58.8 15.8 142 404-546 383-533 (679)
300 4e6h_A MRNA 3'-END-processing 96.0 0.024 8.4E-07 62.0 10.6 134 402-550 437-574 (679)
301 3mkr_B Coatomer subunit alpha; 95.7 0.33 1.1E-05 47.0 15.7 114 402-515 105-231 (320)
302 3mv2_A Coatomer subunit alpha; 95.7 0.074 2.5E-06 51.6 11.1 117 400-516 115-241 (325)
303 4h7y_A Dual specificity protei 95.6 0.21 7.2E-06 42.7 12.2 94 416-517 36-129 (161)
304 3ly7_A Transcriptional activat 95.0 0.17 6E-06 50.4 11.7 125 416-546 194-339 (372)
305 3txn_A 26S proteasome regulato 94.8 0.24 8.1E-06 50.1 12.4 98 404-510 104-209 (394)
306 4gns_B Protein CSD3, chitin bi 94.8 0.18 6.2E-06 55.3 12.3 59 450-508 339-397 (754)
307 3kae_A CDC27, possible protein 94.4 0.46 1.6E-05 41.3 11.2 95 405-519 39-151 (242)
308 2uy1_A Cleavage stimulation fa 93.9 0.86 3E-05 47.7 14.8 119 402-522 216-360 (493)
309 4b4t_R RPN7, 26S proteasome re 93.7 0.2 6.8E-06 51.6 9.3 100 401-512 133-238 (429)
310 1zbp_A Hypothetical protein VP 93.6 0.46 1.6E-05 44.9 10.7 69 457-525 6-74 (273)
311 1ya0_A SMG-7 transcript varian 91.8 1.1 3.9E-05 46.6 11.9 83 446-528 150-232 (497)
312 3txn_A 26S proteasome regulato 90.8 2.3 7.9E-05 42.8 12.6 134 398-531 18-191 (394)
313 1zbp_A Hypothetical protein VP 90.5 1 3.6E-05 42.5 9.0 63 406-483 4-66 (273)
314 2uy1_A Cleavage stimulation fa 90.0 1.8 6.1E-05 45.3 11.5 126 402-548 289-415 (493)
315 2v6y_A AAA family ATPase, P60 89.9 0.54 1.8E-05 36.0 5.4 40 391-430 2-42 (83)
316 4b4t_P 26S proteasome regulato 89.6 3.9 0.00013 42.0 13.5 105 398-511 136-247 (445)
317 2cpt_A SKD1 protein, vacuolar 87.1 1.3 4.4E-05 36.3 6.3 44 388-431 6-50 (117)
318 4gns_B Protein CSD3, chitin bi 85.9 0.77 2.6E-05 50.4 5.6 60 400-474 338-397 (754)
319 2w2u_A Hypothetical P60 katani 84.7 1.2 4.1E-05 34.0 4.6 41 390-430 9-50 (83)
320 1ya0_A SMG-7 transcript varian 83.6 3.3 0.00011 43.1 9.0 81 399-494 152-232 (497)
321 4g26_A Pentatricopeptide repea 82.8 6.2 0.00021 41.2 10.8 99 403-515 109-210 (501)
322 2ff4_A Probable regulatory pro 82.5 9.4 0.00032 38.3 11.7 80 453-532 120-221 (388)
323 3mkq_B Coatomer subunit alpha; 81.0 5.4 0.00019 35.1 8.0 26 401-426 36-61 (177)
324 1wfd_A Hypothetical protein 15 81.0 4.6 0.00016 31.4 6.8 37 395-431 11-47 (93)
325 2v6x_A Vacuolar protein sortin 80.1 1.7 5.9E-05 33.2 4.0 41 390-430 4-44 (85)
326 4b4t_S RPN3, 26S proteasome re 79.6 2.8 9.7E-05 43.5 6.6 68 448-515 231-303 (523)
327 4g26_A Pentatricopeptide repea 78.8 11 0.00037 39.3 11.1 98 412-523 83-183 (501)
328 4a5x_A MITD1, MIT domain-conta 78.7 5.9 0.0002 30.3 6.6 34 397-430 14-47 (86)
329 3mkq_A Coatomer beta'-subunit; 77.8 5.1 0.00017 44.1 8.6 83 402-504 655-745 (814)
330 4b4t_R RPN7, 26S proteasome re 76.6 4.4 0.00015 41.4 7.1 76 450-525 133-213 (429)
331 3mkq_A Coatomer beta'-subunit; 76.5 6.3 0.00021 43.3 8.9 79 401-507 683-761 (814)
332 1wy6_A Hypothetical protein ST 76.1 18 0.00062 30.3 9.1 61 451-511 93-154 (172)
333 3mkq_B Coatomer subunit alpha; 75.9 7.2 0.00025 34.3 7.2 46 459-509 16-61 (177)
334 3kae_A CDC27, possible protein 75.8 28 0.00096 30.3 10.5 53 452-509 37-89 (242)
335 4fhn_B Nucleoporin NUP120; pro 75.6 5.5 0.00019 46.3 8.3 105 403-507 846-963 (1139)
336 4b4t_P 26S proteasome regulato 74.1 29 0.001 35.4 12.6 102 447-548 136-249 (445)
337 2dl1_A Spartin; SPG20, MIT, st 72.3 18 0.00062 29.1 8.0 75 393-467 16-97 (116)
338 2crb_A Nuclear receptor bindin 71.3 6.1 0.00021 30.3 4.7 28 482-509 15-42 (97)
339 3ax2_A Mitochondrial import re 70.0 5.6 0.00019 29.3 4.2 40 392-431 10-49 (73)
340 2crb_A Nuclear receptor bindin 69.8 6.6 0.00022 30.1 4.6 36 396-431 12-47 (97)
341 3t5v_B Nuclear mRNA export pro 69.7 9.3 0.00032 39.2 7.4 103 413-515 140-254 (455)
342 3lpz_A GET4 (YOR164C homolog); 67.1 91 0.0031 30.3 13.5 110 393-505 29-159 (336)
343 2wb7_A PT26-6P; extra chromoso 65.4 17 0.0006 37.0 8.1 16 416-431 449-464 (526)
344 1om2_A Protein (mitochondrial 65.2 11 0.00036 29.4 5.1 41 391-431 12-52 (95)
345 4a5x_A MITD1, MIT domain-conta 64.6 44 0.0015 25.3 8.8 18 492-509 26-43 (86)
346 2cfu_A SDSA1; SDS-hydrolase, l 63.3 15 0.0005 39.8 7.9 61 482-544 449-509 (658)
347 3ax2_A Mitochondrial import re 62.6 20 0.00068 26.3 5.9 37 487-523 22-58 (73)
348 2vkj_A TM1634; membrane protei 59.5 39 0.0013 25.6 7.0 33 396-428 50-82 (106)
349 2vkj_A TM1634; membrane protei 59.0 55 0.0019 24.8 7.8 47 482-529 53-103 (106)
350 3spa_A Mtrpol, DNA-directed RN 58.3 67 0.0023 36.4 11.9 100 401-511 129-230 (1134)
351 2w2u_A Hypothetical P60 katani 57.7 48 0.0016 24.9 7.6 19 456-474 27-45 (83)
352 2v6y_A AAA family ATPase, P60 57.5 54 0.0018 24.6 7.9 13 503-515 39-51 (83)
353 2dl1_A Spartin; SPG20, MIT, st 56.8 17 0.0006 29.2 5.2 45 462-514 17-61 (116)
354 4h7y_A Dual specificity protei 56.4 34 0.0012 29.1 7.2 72 410-497 71-142 (161)
355 1qsa_A Protein (soluble lytic 56.1 16 0.00056 39.0 6.5 56 455-510 292-347 (618)
356 2wpv_A GET4, UPF0363 protein Y 54.4 1.5E+02 0.0053 28.3 12.8 27 480-506 132-158 (312)
357 1wfd_A Hypothetical protein 15 52.9 75 0.0026 24.3 8.3 14 502-515 42-55 (93)
358 3t5x_A PCI domain-containing p 51.9 28 0.00096 31.2 6.5 40 445-484 11-50 (203)
359 3spa_A Mtrpol, DNA-directed RN 50.6 1.4E+02 0.0049 33.9 12.9 96 450-546 129-230 (1134)
360 3qnk_A Putative lipoprotein; a 46.8 1.1E+02 0.0039 31.6 11.2 48 464-511 153-211 (517)
361 2ijq_A Hypothetical protein; s 46.4 91 0.0031 26.7 8.5 59 453-511 37-104 (161)
362 2rpa_A Katanin P60 ATPase-cont 46.0 89 0.003 23.2 7.9 25 486-510 16-40 (78)
363 4gq2_M Nucleoporin NUP120; bet 45.5 63 0.0022 36.5 9.5 27 403-429 844-870 (950)
364 2ijq_A Hypothetical protein; s 44.0 89 0.003 26.8 8.0 68 402-476 35-103 (161)
365 2npm_A 14-3-3 domain containin 43.6 59 0.002 30.3 7.4 53 416-476 173-226 (260)
366 2yin_A DOCK2, dedicator of cyt 43.6 32 0.0011 35.0 6.1 95 402-496 38-140 (436)
367 2br9_A 14-3-3E, 14-3-3 protein 43.0 53 0.0018 30.1 6.9 54 416-476 147-201 (234)
368 2cpt_A SKD1 protein, vacuolar 42.8 1.3E+02 0.0044 24.2 10.2 20 501-520 44-63 (117)
369 3eab_A Spastin; spastin, MIT, 42.7 1.1E+02 0.0038 23.3 7.4 67 395-461 12-85 (89)
370 3ubw_A 14-3-3E, 14-3-3 protein 40.2 62 0.0021 30.1 6.9 54 416-476 173-227 (261)
371 3uzd_A 14-3-3 protein gamma; s 40.0 63 0.0022 29.9 6.9 54 416-476 148-202 (248)
372 1om2_A Protein (mitochondrial 39.9 35 0.0012 26.4 4.3 36 487-522 25-60 (95)
373 4gq2_M Nucleoporin NUP120; bet 39.5 38 0.0013 38.3 6.5 52 455-510 817-868 (950)
374 2v6x_A Vacuolar protein sortin 39.0 1.2E+02 0.0041 22.6 7.9 19 492-510 23-41 (85)
375 1o9d_A 14-3-3-like protein C; 38.9 66 0.0022 30.0 6.9 53 416-475 152-205 (260)
376 2wvi_A Mitotic checkpoint seri 36.3 2E+02 0.007 24.6 9.8 49 467-515 79-129 (164)
377 2ymb_A MITD1, MIT domain-conta 35.4 7.9 0.00027 36.2 0.0 40 393-432 17-56 (257)
378 3t5x_A PCI domain-containing p 35.1 77 0.0026 28.3 6.6 34 482-515 14-47 (203)
379 2o8p_A 14-3-3 domain containin 34.9 80 0.0027 28.8 6.6 59 411-476 137-196 (227)
380 3otn_A SUSD superfamily protei 33.8 1.5E+02 0.0052 30.2 9.6 48 464-511 160-226 (482)
381 3iqu_A 14-3-3 protein sigma; s 33.7 88 0.003 28.7 6.7 55 415-476 149-204 (236)
382 2wpv_A GET4, UPF0363 protein Y 32.7 3.3E+02 0.011 25.9 13.6 86 402-496 16-106 (312)
383 3i4g_A SUSD-like carbohydrate 32.4 1.3E+02 0.0043 31.3 8.8 48 464-511 167-227 (528)
384 3re2_A Predicted protein; meni 32.2 2.9E+02 0.0099 27.1 10.1 51 478-528 292-348 (472)
385 2cfu_A SDSA1; SDS-hydrolase, l 32.1 53 0.0018 35.3 5.9 49 450-498 451-499 (658)
386 3myv_A SUSD superfamily protei 32.1 79 0.0027 32.1 7.0 47 464-510 164-218 (454)
387 4fhn_B Nucleoporin NUP120; pro 30.9 40 0.0014 39.0 5.0 52 454-509 818-869 (1139)
388 3mcx_A SUSD superfamily protei 29.9 98 0.0033 31.6 7.3 49 464-512 176-232 (477)
389 3efz_A 14-3-3 protein; 14-3-3, 29.3 83 0.0028 29.4 5.8 57 416-477 169-226 (268)
390 3kez_A Putative sugar binding 29.0 89 0.003 31.8 6.7 47 464-510 170-224 (461)
391 2rpa_A Katanin P60 ATPase-cont 28.7 37 0.0012 25.3 2.7 26 451-476 15-40 (78)
392 2yhe_A SEC-alkyl sulfatase; hy 34.8 12 0.00041 40.5 0.0 52 451-502 464-515 (668)
393 3htx_A HEN1; HEN1, small RNA m 27.5 69 0.0024 35.5 5.6 65 285-349 560-650 (950)
394 4b4t_S RPN3, 26S proteasome re 27.4 1E+02 0.0034 32.0 6.6 69 403-481 235-303 (523)
395 3ckc_A SUSD; TPR repeat, carbo 27.4 3.6E+02 0.012 27.5 11.4 88 417-510 104-231 (527)
396 4a1g_A Mitotic checkpoint seri 26.8 2.9E+02 0.0098 23.3 8.7 49 467-515 84-134 (152)
397 3lew_A SUSD-like carbohydrate 26.7 1.1E+02 0.0037 31.5 6.9 48 464-511 174-232 (495)
398 2cwy_A Hypothetical protein TT 26.0 2E+02 0.0068 22.0 6.6 63 403-476 5-67 (94)
399 2oo2_A Hypothetical protein AF 25.3 86 0.0029 23.7 4.2 37 392-428 28-64 (86)
400 2pmr_A Uncharacterized protein 24.9 90 0.0031 23.7 4.3 35 392-426 32-66 (87)
401 2rkl_A Vacuolar protein sortin 22.4 1.2E+02 0.004 20.6 4.0 40 391-430 12-51 (53)
402 3ph0_C ASCG; type III secretio 22.3 2E+02 0.0067 19.8 6.3 51 451-502 9-60 (61)
403 3myv_A SUSD superfamily protei 22.3 1.1E+02 0.0036 31.1 5.8 30 447-476 189-218 (454)
404 2zan_A Vacuolar protein sortin 22.1 19 0.00064 36.8 0.0 38 394-431 6-43 (444)
405 4b4t_O 26S proteasome regulato 21.8 5.7E+02 0.02 25.0 12.9 93 456-548 84-197 (393)
406 3iv0_A SUSD homolog; NP_809186 20.9 3.5E+02 0.012 27.4 9.5 46 464-509 166-239 (481)
407 3kez_A Putative sugar binding 20.5 1.2E+02 0.004 30.9 5.7 30 447-476 195-224 (461)
408 3lxu_X Tripeptidyl-peptidase 2 20.4 5.7E+02 0.02 29.8 11.6 86 439-525 1232-1326(1354)
No 1
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=5.6e-66 Score=527.21 Aligned_cols=355 Identities=81% Similarity=1.270 Sum_probs=222.7
Q ss_pred cCCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccc
Q 008400 27 KVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKG 106 (567)
Q Consensus 27 ~~~~~~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~G 106 (567)
+++++..++++|++|+++++|+|+..|..||.|.+||++++.||++|++++.+++|+.|.+|.+++|+||+++|.+|++|
T Consensus 1 ~~~~~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~gm~~G 80 (356)
T 3jxv_A 1 KVGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKG 80 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhcCCCC
Confidence 46778889999999999999999778999999999999999999999999987789999999999999999999999999
Q ss_pred cEEEEEecCCcccCCCCCCCCCCCCCcEEEEEEEEEEeeccccccccceeeeeeeccccccCCCCCCeEEEEEEEEeCCC
Q 008400 107 ENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDG 186 (567)
Q Consensus 107 e~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g 186 (567)
++++|+|||++|||+.+.++.||++++++|+|+|++|.++.++..++.+.++++.+|.|+.+|..++.|++||+++++||
T Consensus 81 e~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dg 160 (356)
T 3jxv_A 81 ENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDG 160 (356)
T ss_dssp -------------------------------------CCEEETTSSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTS
T ss_pred CEEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCC
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeeeccceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeee
Q 008400 187 MVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEI 266 (567)
Q Consensus 187 ~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~ 266 (567)
++|+++.++.|.+|.+++++||+++|.+|+.||++++.|||+++||+.|.+.......|||+++|+|+|+|++|..+.++
T Consensus 161 t~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv 240 (356)
T 3jxv_A 161 TVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEI 240 (356)
T ss_dssp CEEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEE
T ss_pred CEEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEeccccc
Confidence 99999999999999999999999999999999999999999999999998766666789999999999999999999999
Q ss_pred ecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEE
Q 008400 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (567)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (567)
+.|++++++++++|.|..+|..++.|+|||.+++.||++|+++.. .+.+|+.|.+|.+++|+||+.+|..|++||++.|
T Consensus 241 ~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~-~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v 319 (356)
T 3jxv_A 241 GDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGH-DEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALV 319 (356)
T ss_dssp STTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESC-TTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEE
T ss_pred ccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccc-cCCcCEEEEECCCccchHHHHHHhCCCCCCEEEE
Confidence 999999999999999988999999999999999999999998754 4578999999999999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCccEEEEEEEEEeee
Q 008400 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (567)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~ 383 (567)
.|+|.++||+.+... ...||++++++|+|+|+++.+
T Consensus 320 ~ip~~~aYG~~~~~~-~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 320 TIPPEYAYGSTESKQ-DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EECGGGTTTTSCEES-SSEECTTCCEEEEEEEEEEEC
T ss_pred EEChHHccCCCCcCC-CCcCCcCCeEEEEEEEEEEEc
Confidence 999999999887533 256899999999999999864
No 2
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.9e-56 Score=474.21 Aligned_cols=387 Identities=36% Similarity=0.632 Sum_probs=334.8
Q ss_pred cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEecCCCCcchHHHHHhhccCCcEEEEEec
Q 008400 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (567)
Q Consensus 151 ~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip 226 (567)
.++++.++++.+|+|...|..||.|+|||++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 678899999999999777999999999999999999999986 6899999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeeecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEE
Q 008400 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVF 306 (567)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~ 306 (567)
|+++||..|.+ +.|||+++|+|+|+|++|.. .+++.|++++++++++|.|..+|..|+.|+|||++++ +|++|
T Consensus 109 ~~~~yg~~g~~-----~~i~~~~~l~~~v~l~~~~~-~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f 181 (457)
T 1kt0_A 109 PEYAYGSAGSL-----PKIPSNATLFFEIELLDFKG-EDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMF 181 (457)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEE
T ss_pred hHHhccccCCC-----CCCCCCCcEEEEEeeceeec-ccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEE
Confidence 99999988874 57999999999999999976 4778999999999999999889999999999999999 89999
Q ss_pred EeccCCCCcccEEEEcCccc---hhhHHHHHHhccCCCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeee
Q 008400 307 VKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (567)
Q Consensus 307 ~~~~~~~~~~~~~~~lg~~~---vi~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~ 383 (567)
+++ +++|.+|++. ++++|+.++..|++||++.+.++|.++|+..+... ..||+++.+.|.++|.++.+
T Consensus 182 ~~~-------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~--~~ip~~~~l~y~~~l~~~~~ 252 (457)
T 1kt0_A 182 DCR-------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPK--FGIEPNAELIYEVTLKSFEK 252 (457)
T ss_dssp EEE-------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGG--GTBCTTCCEEEEEEEEEEEC
T ss_pred ecC-------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcc--cCCCCCCEEEEEhhhhhccc
Confidence 753 4899999874 89999999999999999999999999999988653 46899999999999999999
Q ss_pred cccccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccC
Q 008400 384 EKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD 463 (567)
Q Consensus 384 ~~~~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~ 463 (567)
....|.+..+++...+..++++|+.+++.|+|.+|+..|++|+.+.+.......+...+...+...+|+|+|.||+++++
T Consensus 253 A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~ 332 (457)
T 1kt0_A 253 AKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLRE 332 (457)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999887666777788888999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008400 464 YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNM 543 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~ 543 (567)
|++|+.+|++||+++|+++++|+++|.+|+.+++|++|+.+|++|++++|+|..++..+..+..++++.+++++++|++|
T Consensus 333 ~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 333 YTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhhhcccc
Q 008400 544 FAKMKSRAQG 553 (567)
Q Consensus 544 f~~~~~~~~~ 553 (567)
|.++...++.
T Consensus 413 f~k~~~~d~~ 422 (457)
T 1kt0_A 413 FKKFAEQDAK 422 (457)
T ss_dssp ----------
T ss_pred Hhhhhhcccc
Confidence 9998776654
No 3
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=2.7e-43 Score=374.35 Aligned_cols=375 Identities=31% Similarity=0.488 Sum_probs=273.5
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEec
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip 114 (567)
+++|+.|+++++|+|...|..||.|.|||++++.||++|++|+.++.|+.|.+|.+++|+||+++|.+|++|++++|+||
T Consensus 29 ~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~i~ 108 (457)
T 1kt0_A 29 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLLCK 108 (457)
T ss_dssp ----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEEEC
Confidence 68899999999999954599999999999999889999999988778999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCcEEEEEEEEEEeeccccccccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeeccc
Q 008400 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADG 194 (567)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~ 194 (567)
|+++||..+.++.||++++++|+|+|++|... ++..+++++++++..|.|+..|..|+.|+++|++++ +|++|++ .+
T Consensus 109 ~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~-~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~-~~ 185 (457)
T 1kt0_A 109 PEYAYGSAGSLPKIPSNATLFFEIELLDFKGE-DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDC-RD 185 (457)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEE-EE
T ss_pred hHHhccccCCCCCCCCCCcEEEEEeeceeecc-cccCCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEec-Cc
Confidence 99999999998899999999999999999875 566788999999999999999999999999999999 8888886 46
Q ss_pred eEEEecCC---CCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeeecCcc
Q 008400 195 VEFTVKDG---HFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKK 271 (567)
Q Consensus 195 ~~~~~g~~---~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~ 271 (567)
+.|.+|.| .++++|+.++..|+.|+++.|.++|.++|+..|.+ ...|||++.+.|.+.+.+|....+...
T Consensus 186 ~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~----~~~ip~~~~l~y~~~l~~~~~A~~~~~--- 258 (457)
T 1kt0_A 186 VAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP----KFGIEPNAELIYEVTLKSFEKAKESWE--- 258 (457)
T ss_dssp EEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBG----GGTBCTTCCEEEEEEEEEEECCCCGGG---
T ss_pred eEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCc----ccCCCCCCEEEEEhhhhhcccCcchhh---
Confidence 89999976 48999999999999999999999999999988864 236899999999999988754222110
Q ss_pred eeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCcc-chhhHHHHHHhccCCCcEEEEEEcC
Q 008400 272 VIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALLTIAP 350 (567)
Q Consensus 272 v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v~i~~ 350 (567)
+.+. ..|... ..+..-|. .-+..|+. .-+..++.++... +
T Consensus 259 ---~~~~-----~~~~~a-------~~~~~~G~-------------~~~~~g~~~~A~~~y~~Al~~~-----------p 299 (457)
T 1kt0_A 259 ---MDTK-----EKLEQA-------AIVKEKGT-------------VYFKGGKYMQAVIQYGKIVSWL-----------E 299 (457)
T ss_dssp ---SCHH-----HHHHHH-------HHHHHHHH-------------HHHHTTCHHHHHHHHHHHHHHH-----------T
T ss_pred ---cCHH-----HHHHHH-------HHHHHHHH-------------HHHhCCCHHHHHHHHHHHHHHh-----------c
Confidence 0000 000000 00000000 00111221 1223344443211 1
Q ss_pred CCccCCccccccccCCCCCccEEEEEEEEEeeecccccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh
Q 008400 351 EYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (567)
Q Consensus 351 ~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~~~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (567)
. ...+ .. ....+.....+..+.++|..+++.|+|++|+..|++|+.+.+
T Consensus 300 ~-----------------~~~~---------~~-----~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 348 (457)
T 1kt0_A 300 M-----------------EYGL---------SE-----KESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS 348 (457)
T ss_dssp T-----------------CCSC---------CH-----HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred c-----------------cccC---------Ch-----HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 0 0000 00 000122334577889999999999999999999999999877
Q ss_pred ccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 008400 431 YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFD 504 (567)
Q Consensus 431 ~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~ 504 (567)
.+ ..+|+++|.||+++++|++|+.+|++|++++|++..++.+++.++..++++++|.+.
T Consensus 349 ~~---------------~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 349 AN---------------EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp TC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---------------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 345899999999999999999999999999999999999999999999999988754
No 4
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=7.6e-40 Score=320.80 Aligned_cols=223 Identities=44% Similarity=0.762 Sum_probs=205.0
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEec
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip 114 (567)
+++|++|+++++|+|...|..||.|.|||++++.||++|++++.++.|+.|.+|.+++|+||++||.+|++|++++|+||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 58899999999999955599999999999999989999999987678999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCcEEEEEEEEEEeeccccc--cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeec
Q 008400 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSVKDIC--KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (567)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~~~~~~--~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (567)
|++|||..+.++.||++++++|+|+|+++... ++. .++++.++++++|+|...+..||.|+++|++++ +|++|++
T Consensus 129 p~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~~-~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~- 205 (280)
T 1q1c_A 129 PEYAYGSAGSPPKIPPNATLVFEVELFEFKGE-DLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ- 205 (280)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEECE-ECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-
T ss_pred cHHhCCCcCccCCCCCCCcEEEEEEeeeeccc-ccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-
Confidence 99999999988899999999999999999864 444 778899999999999878999999999999998 8999887
Q ss_pred cceEEEecCCC---CcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeeccccee
Q 008400 193 DGVEFTVKDGH---FCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVS 264 (567)
Q Consensus 193 ~~~~~~~g~~~---~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~ 264 (567)
.++.|.+|.+. +++||+++|.+|++||+++|.|||+++||+.+.+ ...|||+++|+|+|+|+++....
T Consensus 206 ~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~----~~~IP~~~~l~f~V~L~~i~~~~ 276 (280)
T 1q1c_A 206 RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKE----KFQIPPNAELKYELHLKSFEKAK 276 (280)
T ss_dssp EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBG----GGTBCTTCCEEEEEEEEEEECCC
T ss_pred CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCc----cCccCCCCeEEEEEEEEEEeCCC
Confidence 68999999987 5999999999999999999999999999988753 13599999999999999987544
No 5
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=2.1e-37 Score=315.78 Aligned_cols=282 Identities=38% Similarity=0.697 Sum_probs=260.5
Q ss_pred eeeeecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccc---hhhHHHHHHhccC
Q 008400 263 VSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMK 339 (567)
Q Consensus 263 ~~d~~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~---vi~gle~~l~~M~ 339 (567)
..+++.|++++|+|+++|.|..+|..|+.|+|||.+++ +|++|+++ |++|.+|.+. ++++|+.+|..|+
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-------~~~f~lG~g~~~~~~~~~e~al~~~~ 89 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-------ELRFEIGEGENLDLPYGLERAIQRME 89 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-------EEEEETTCGGGGTCCHHHHHHHTTCC
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-------CeEEEeCCCCccccchHHHHHHhcCC
Confidence 35677899999999999999878999999999999999 89999864 6999999986 4899999999999
Q ss_pred CCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeeecccccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHH
Q 008400 340 KNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARAS 419 (567)
Q Consensus 340 ~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~~~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~ 419 (567)
+||++.+.++|.++||..+... ..||+++.+.|+++|.++.+....+.+..+.....+..+...|+.+++.|+|++|+
T Consensus 90 ~Ge~~~l~i~p~~ayg~~g~~~--~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~ 167 (336)
T 1p5q_A 90 KGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQAL 167 (336)
T ss_dssp TTCEEEEEECTTTTTTTTCBGG--GTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCeEEEEECCccccCcCCCCc--cCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999988653 25899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHH
Q 008400 420 KRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLD 499 (567)
Q Consensus 420 ~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~ 499 (567)
..|++|+.+.+.......+.......+...+++|+|.||+++++|++|+.+|+++|+++|+++++|+++|.+|..+|+++
T Consensus 168 ~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~ 247 (336)
T 1p5q_A 168 LQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFE 247 (336)
T ss_dssp HHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH
Confidence 99999999999887666677788888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhccccc
Q 008400 500 LAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMKSRAQGG 554 (567)
Q Consensus 500 ~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~~~~~~~ 554 (567)
+|+.+|++|++++|++..+...+..+...+++..+++++.|++||+++...+...
T Consensus 248 ~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 302 (336)
T 1p5q_A 248 LARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 302 (336)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999999999987766543
No 6
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=9e-38 Score=318.72 Aligned_cols=279 Identities=34% Similarity=0.524 Sum_probs=211.9
Q ss_pred CcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecC-CcEEEeccCCCCcccEEEEcCcc-chhhHHHHHHhccCCCcEEEE
Q 008400 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQD-GTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALL 346 (567)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~-g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v 346 (567)
+.++.++|+++|.|. .|..|+.|+|||.+++.+ |++|+++.. .+.|++|.+|.+ .+|+||+.+|.+|++||++.|
T Consensus 48 ~~~~~~~~~~~g~g~-~~~~gd~v~v~y~g~~~~~g~~fd~~~~--~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~ 124 (338)
T 2if4_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERALV 124 (338)
T ss_dssp ETTEEEEEEECCBSC-CCCTTCEEEEEEEEEETTTCCCCEEHHH--HTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEE
T ss_pred CCCeEEEEEeCCCCC-CCCCCCEEEEEEEEEEcCCCcEeecccC--CCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEE
Confidence 568999999999995 899999999999999985 999998742 467999999999 899999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCccEEEEEEEEEeeecc---cccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHH
Q 008400 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEK---ESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYE 423 (567)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~---~~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~ 423 (567)
+|++.++||..+... ...||+++++.|.|+|..+.... ..|.++.++++..+..++..|+.+++.|+|.+|+..|.
T Consensus 125 ~i~~~~~yg~~~~~~-~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~ 203 (338)
T 2if4_A 125 HVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYE 203 (338)
T ss_dssp EECGGGSSCSSCCCS-SSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHH
T ss_pred EECHHHhcCCCCCCC-CCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 999999999987632 24699999999999999887643 46888999999999999999999999999999999999
Q ss_pred HHHHhhhccC--CCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHH
Q 008400 424 KAVKYIEYDT--SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLA 501 (567)
Q Consensus 424 ~al~~~~~~~--~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A 501 (567)
+|+.+.+.+. ............+...+|+|+|.||+++++|++|+.+|+++|+++|++.++|+++|.+|..+|+|++|
T Consensus 204 ~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A 283 (338)
T 2if4_A 204 MAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSA 283 (338)
T ss_dssp HHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999877543 11223334445566678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhcc
Q 008400 502 EFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMKSRA 551 (567)
Q Consensus 502 ~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~~~~ 551 (567)
+.+|++|++++|++..++..+..+..+.....+++++.|++||.......
T Consensus 284 ~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 284 RDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp HHHHHHTTC-----------------------------------------
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 99999999999999999999999988888888888999999998765443
No 7
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=7.7e-37 Score=311.86 Aligned_cols=220 Identities=39% Similarity=0.688 Sum_probs=205.9
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEec
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip 114 (567)
.+.++.++++++|.|+..|..||.|.|||++++.||++|+++ .++.|.+|.+++++||++||.+|++||++.|+||
T Consensus 125 ~D~~~~k~i~~~G~g~~~p~~g~~V~v~y~g~l~dgt~~~~~----~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~ 200 (356)
T 3jxv_A 125 KDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKS----EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVK 200 (356)
T ss_dssp SSSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEE----EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEEC
T ss_pred cCceeEEEEEecCcccCCCCCCCEEEEEEEEEECCCCEEecc----CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEC
Confidence 568999999999999999999999999999999999999987 4799999999999999999999999999999999
Q ss_pred CCcccCCCCCCC-----CCCCCCcEEEEEEEEEEeeccccccccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEe
Q 008400 115 PELAYGESGSPP-----TIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVV 189 (567)
Q Consensus 115 ~~~ayg~~~~~~-----~ip~~~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~ 189 (567)
|+++||..|.++ .||++++|+|+|+|++|..+.++..+.++.++++++|.|+..|+.||.|++||++++.+|++|
T Consensus 201 p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~f 280 (356)
T 3jxv_A 201 PQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVF 280 (356)
T ss_dssp GGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEE
T ss_pred hHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEE
Confidence 999999998764 699999999999999999989999999999999999999999999999999999999999999
Q ss_pred eec-----cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeeccc
Q 008400 190 GKA-----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWK 261 (567)
Q Consensus 190 ~~~-----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (567)
+++ +|+.|.+|.+++++||+++|.+|++||+++|+|||+++||+.+... ...|||+++|+|+|+|++|.
T Consensus 281 d~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~---~~~Ip~~~~l~f~vel~~~~ 354 (356)
T 3jxv_A 281 LKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQ---DAIVPPNSTVIYEVELVSFV 354 (356)
T ss_dssp EEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEES---SSEECTTCCEEEEEEEEEEE
T ss_pred eeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCC---CCcCCcCCeEEEEEEEEEEE
Confidence 865 6899999999999999999999999999999999999999876421 24689999999999999874
No 8
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=100.00 E-value=4e-36 Score=294.40 Aligned_cols=223 Identities=37% Similarity=0.671 Sum_probs=202.4
Q ss_pred cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEecCCCCcchHHHHHhhccCCcEEEEEec
Q 008400 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (567)
Q Consensus 151 ~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip 226 (567)
.++++.++++++|.|...|..||.|+++|++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip 128 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCK 128 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEEEC
Confidence 678999999999999777999999999999999999999986 6899999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeee--cCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCc
Q 008400 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGT 304 (567)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~--~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~ 304 (567)
|+++||+.|.+ +.|||+++|+|+|+|++|.. .++. .|+++.++++++|.|...|..|+.|+|||.+++ +|+
T Consensus 129 p~~aYG~~g~~-----~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~ 201 (280)
T 1q1c_A 129 PEYAYGSAGSP-----PKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDK 201 (280)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTE
T ss_pred cHHhCCCcCcc-----CCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccccccCCceEEEEEEEEe-CCE
Confidence 99999988763 57999999999999999976 4667 799999999999999878999999999999998 899
Q ss_pred EEEeccCCCCcccEEEEcCccc---hhhHHHHHHhccCCCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 305 VFVKKGHSEEEQLFEFKTDEEQ---VIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 305 ~~~~~~~~~~~~~~~~~lg~~~---vi~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
+|++ .+++|.+|.+. +|+||+.+|..|++||++.|.++++|+||..+... ..||+++++.|+|+|+++
T Consensus 202 ~fd~-------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~--~~IP~~~~l~f~V~L~~i 272 (280)
T 1q1c_A 202 LFDQ-------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEK--FQIPPNAELKYELHLKSF 272 (280)
T ss_dssp EEEE-------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGG--GTBCTTCCEEEEEEEEEE
T ss_pred EEec-------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCcc--CccCCCCeEEEEEEEEEE
Confidence 9975 36999999998 49999999999999999999999999999876542 259999999999999999
Q ss_pred eecccccC
Q 008400 382 EKEKESWD 389 (567)
Q Consensus 382 ~~~~~~~~ 389 (567)
.+.++.|+
T Consensus 273 ~~~~~~W~ 280 (280)
T 1q1c_A 273 EKAKESWE 280 (280)
T ss_dssp ECCCC---
T ss_pred eCCCCCCC
Confidence 98888874
No 9
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.93 E-value=2.3e-26 Score=234.29 Aligned_cols=297 Identities=19% Similarity=0.256 Sum_probs=176.6
Q ss_pred CCCCcCccCCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcC-CCEEeecCCCCCcEEEEccCC-cchHHHH
Q 008400 20 PDDAPMMKVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQG-NVIKGWD 97 (567)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~-g~~~~~t~~~~~p~~~~lG~~-~~i~gl~ 97 (567)
.+++.++++.....+.++|+.|+++++|+| ..|..||.|.|||++++.+ |++|++++..+.|+.|.+|.+ ++|+||+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e 110 (338)
T 2if4_A 32 QEGNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLA 110 (338)
T ss_dssp ---CCCCCCCSCCEEEETTEEEEEEECCBS-CCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHH
T ss_pred cccCCCCCCCcCceeCCCCeEEEEEeCCCC-CCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHH
Confidence 345555678777888999999999999999 7899999999999999985 999999987678999999999 8999999
Q ss_pred HHhcccccccEEEEEecCCcccCCCCC--CCCCCCCCcEEEEEEEEEEeeccccccccceeeeeeeccccccCCCCCCeE
Q 008400 98 IGIKTMKKGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEV 175 (567)
Q Consensus 98 ~~l~~m~~Ge~~~i~ip~~~ayg~~~~--~~~ip~~~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~g~~~~~~~d~V 175 (567)
++|.+|++||+++|+|||+++||..+. .+.||++++++|.|+|+++....+..
T Consensus 111 ~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~------------------------- 165 (338)
T 2if4_A 111 IGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGK------------------------- 165 (338)
T ss_dssp HHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCB-------------------------
T ss_pred HHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCcccc-------------------------
Confidence 999999999999999999999999987 36799999999999998775421100
Q ss_pred EEEEEEEeCCCeEeeeccceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEE
Q 008400 176 LVNYEARLEDGMVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIAL 255 (567)
Q Consensus 176 ~v~y~~~~~~g~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v 255 (567)
..+...+++-+.. +
T Consensus 166 --------------------------~~~~~~~~~~~~~---------------a------------------------- 179 (338)
T 2if4_A 166 --------------------------ARSDMTVEERIGA---------------A------------------------- 179 (338)
T ss_dssp --------------------------TTTBCCHHHHHHH---------------H-------------------------
T ss_pred --------------------------ccccCCHHHHHHH---------------H-------------------------
Confidence 0000000000000 0
Q ss_pred EeecccceeeeecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCcc-chhhHHHHH
Q 008400 256 ELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRA 334 (567)
Q Consensus 256 ~l~~~~~~~d~~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~ 334 (567)
..+ ..-|... +..|+. .-+..++.+
T Consensus 180 --~~~---------------------------------------~~~g~~~-------------~~~g~~~~A~~~y~~A 205 (338)
T 2if4_A 180 --DRR---------------------------------------KMDGNSL-------------FKEEKLEEAMQQYEMA 205 (338)
T ss_dssp --HHH---------------------------------------HHHHHHT-------------CSSSCCHHHHHHHHHH
T ss_pred --HHH---------------------------------------HHHHHHH-------------HhcCCHHHHHHHHHHH
Confidence 000 0000000 001111 123345555
Q ss_pred HhccCCCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeeecccccCCChHHHHHHHhhhhhhhhHHHhcCc
Q 008400 335 VITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGK 414 (567)
Q Consensus 335 l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~~~~~~~~~e~~~~a~~~~~~G~~~~~~g~ 414 (567)
+....... .|...+.. ......-....+.+.|..+++.|+
T Consensus 206 l~~~p~~~----------~~~~~~~~------------------------------~~~~~~l~~~~~~nla~~~~~~g~ 245 (338)
T 2if4_A 206 IAYMGDDF----------MFQLYGKY------------------------------QDMALAVKNPCHLNIAACLIKLKR 245 (338)
T ss_dssp HHHSCHHH----------HHTCCHHH------------------------------HHHHHHHHTHHHHHHHHHHHTTTC
T ss_pred HHHhccch----------hhhhcccH------------------------------HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 43221000 00000000 000011122467899999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH-HH
Q 008400 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA-YI 493 (567)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a-~~ 493 (567)
|++|+..|++|+.+.+.+. .+|+++|.+|+.+++|++|+.+++++++++|++..++..++.+ ..
T Consensus 246 ~~~A~~~~~~al~~~p~~~---------------~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 246 YDEAIGHCNIVLTEEEKNP---------------KALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp CHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 9999999999999876432 4589999999999999999999999999999999999999998 44
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHH
Q 008400 494 QMADLDLAEFDIKKALEIDPDNRD 517 (567)
Q Consensus 494 ~l~~~~~A~~~~~~al~l~P~n~~ 517 (567)
..+.+++|...|++++...|++..
T Consensus 311 ~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 311 EKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCC
Confidence 567788999999999999998854
No 10
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.91 E-value=5e-24 Score=180.19 Aligned_cols=111 Identities=51% Similarity=0.889 Sum_probs=104.5
Q ss_pred eecCCCeEEEEEEcccCCCC-CCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEE
Q 008400 33 EIGNQGLKKKLVKEGEGWDT-PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (567)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~-~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i 111 (567)
.++++|++|+++++|+| .. ++.||.|.|||++++.||++|++++..+.|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 2 ~~~~~g~~~~~~~~G~g-~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v 80 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDG-ATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARL 80 (113)
T ss_dssp EECGGGCEEEEEECCCS-SCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEE
T ss_pred CCCCCCeEEEEEECCCC-cccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEE
Confidence 35789999999999999 55 99999999999999989999999987668999999999999999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCcEEEEEEEEEEe
Q 008400 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (567)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~ 144 (567)
.|||++|||+.+.++.||++++++|+|+|++++
T Consensus 81 ~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 81 TIPGPYAYGPRGFPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EECHHHCcCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999999999888899999999999999873
No 11
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.91 E-value=6.7e-24 Score=186.82 Aligned_cols=111 Identities=52% Similarity=0.906 Sum_probs=105.9
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEec
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip 114 (567)
.++|++|+++++|+|...|..||.|.|||++++.||++|++++.++.|+.|.+|.+++|+||+++|.+|++|++++|+||
T Consensus 33 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 112 (144)
T 3o5e_A 33 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 112 (144)
T ss_dssp CSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEEEC
Confidence 58999999999999955899999999999999999999999988778999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCcEEEEEEEEEEee
Q 008400 115 PELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (567)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~ 145 (567)
|++|||..+.++.|||+++|+|+|+|++|+.
T Consensus 113 p~~aYG~~g~~~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 113 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHCcCCCCCCCCcCCCCeEEEEEEEEEecC
Confidence 9999999999889999999999999999863
No 12
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.91 E-value=7.8e-24 Score=180.87 Aligned_cols=109 Identities=46% Similarity=0.832 Sum_probs=102.2
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCC-------CCcEEEEccCCcchHHHHHHhccccccc
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDR-------STPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~-------~~p~~~~lG~~~~i~gl~~~l~~m~~Ge 107 (567)
.|+|++|+++++|+|...|+.||.|.|||++++.||++|++++.. +.|+.|.+|.+++|+||+++|.+|++|+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge 81 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGE 81 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCC
Confidence 589999999999999657999999999999999999999999753 4899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCC-CCCCCCcEEEEEEEEEE
Q 008400 108 NAVFTIPPELAYGESGSPP-TIPPNATLQFDVELLSW 143 (567)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~-~ip~~~~l~~~vel~~~ 143 (567)
+++|+|||++|||+.+.++ .|||+++++|+|+|+++
T Consensus 82 ~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 82 KARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred EEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 9999999999999999865 79999999999999986
No 13
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.91 E-value=5.8e-24 Score=183.66 Aligned_cols=111 Identities=52% Similarity=0.906 Sum_probs=105.5
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEec
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip 114 (567)
.++|++|+++++|+|...|..||.|.|||++++.||++|++++.++.|+.|.+|.+++|+||+++|.+|++|++++|.||
T Consensus 17 ~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~ip 96 (128)
T 3o5q_A 17 KDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCK 96 (128)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEEC
T ss_pred CCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 67899999999999955799999999999999999999999987678999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCcEEEEEEEEEEee
Q 008400 115 PELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (567)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~ 145 (567)
|++|||..+.++.|||+++++|+|+|++++.
T Consensus 97 ~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 97 PEYAYGSAGSLPKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred hHHcCCCCCCCCCcCCCCEEEEEEEEEEecC
Confidence 9999999999889999999999999999864
No 14
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.91 E-value=7.6e-24 Score=184.46 Aligned_cols=112 Identities=55% Similarity=0.988 Sum_probs=105.3
Q ss_pred cCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEec
Q 008400 35 GNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIP 114 (567)
Q Consensus 35 ~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip 114 (567)
+++|++|+++++|+|...|..||.|.|||++++.||++|++++.+++|+.|.+|.+++++||++||.+|++|++++|+||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 67999999999999955799999999999999889999999986568999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCcEEEEEEEEEEeec
Q 008400 115 PELAYGESGSPPTIPPNATLQFDVELLSWTSV 146 (567)
Q Consensus 115 ~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~~ 146 (567)
|++|||+.+.++.||++++++|+|+|+++...
T Consensus 92 ~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 92 SDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp GGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred hHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 99999999988899999999999999999864
No 15
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.90 E-value=2.1e-23 Score=180.73 Aligned_cols=111 Identities=52% Similarity=0.868 Sum_probs=105.1
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEE
Q 008400 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (567)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i 111 (567)
...+++|++|+++++|+| ..++.||.|.|||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|
T Consensus 23 ~~~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 23 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred cEECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 345889999999999999 8999999999999999989999999987678999999999999999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCcEEEEEEEEEE
Q 008400 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (567)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~ 143 (567)
.|||++|||+.+.++.|||+++++|+|+|+++
T Consensus 102 ~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 TIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 99999999999988889999999999999874
No 16
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.90 E-value=2.7e-23 Score=189.53 Aligned_cols=129 Identities=29% Similarity=0.558 Sum_probs=115.2
Q ss_pred CCCCCcCccCCceeeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEc-CCCEEeecCCCCCcEEEEccCC-cchHHH
Q 008400 19 LPDDAPMMKVGEEKEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQG-NVIKGW 96 (567)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~-~g~~~~~t~~~~~p~~~~lG~~-~~i~gl 96 (567)
+++..++++......++++|++|+++++|+| ..|..||.|.|||++++. +|++|++++.++.|+.|.+|.+ ++|+||
T Consensus 31 ~~~~~~p~~~~~~~~~~~~gl~~~vl~~G~G-~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~ 109 (180)
T 2f4e_A 31 SQEGNVPPKVDSEAEVLDEKVSKQIIKEGHG-SKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGL 109 (180)
T ss_dssp ---CCSCCCCCSCCEEEETTEEEEEEECCBS-CCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHH
T ss_pred CCcccCCcccCCCcEECCCceEEEEEeCCCC-CCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHH
Confidence 4445555677777788999999999999999 799999999999999998 6999999988778999999999 999999
Q ss_pred HHHhcccccccEEEEEecCCcccCCCCC--CCCCCCCCcEEEEEEEEEEeeccc
Q 008400 97 DIGIKTMKKGENAVFTIPPELAYGESGS--PPTIPPNATLQFDVELLSWTSVKD 148 (567)
Q Consensus 97 ~~~l~~m~~Ge~~~i~ip~~~ayg~~~~--~~~ip~~~~l~~~vel~~~~~~~~ 148 (567)
+++|.+|++|++++|+|||++|||..+. ++.||++++++|+|+|+++..+..
T Consensus 110 eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 110 AIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp HHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCC
T ss_pred HHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCcc
Confidence 9999999999999999999999999986 468999999999999999987543
No 17
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.90 E-value=1.9e-23 Score=174.95 Aligned_cols=107 Identities=50% Similarity=0.934 Sum_probs=100.4
Q ss_pred CeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCc
Q 008400 38 GLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPEL 117 (567)
Q Consensus 38 g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ 117 (567)
|++|+++++|+|...++.||.|.+||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++++|.|||++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ 80 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY 80 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECGGG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECHHH
Confidence 78999999999943499999999999999999999999986568999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCcEEEEEEEEEEe
Q 008400 118 AYGESGSPPTIPPNATLQFDVELLSWT 144 (567)
Q Consensus 118 ayg~~~~~~~ip~~~~l~~~vel~~~~ 144 (567)
|||+.+.++.||++++++|+|+|++++
T Consensus 81 ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 81 AYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp TTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred ccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 999999888899999999999999873
No 18
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.90 E-value=1.7e-23 Score=180.75 Aligned_cols=113 Identities=54% Similarity=0.963 Sum_probs=104.7
Q ss_pred eeeecCCCeEEE--EEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccE
Q 008400 31 EKEIGNQGLKKK--LVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGEN 108 (567)
Q Consensus 31 ~~~~~~~g~~~~--~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~ 108 (567)
....+++|++|+ ++++|+|...|+.||.|.|||++++.||++|++++..++|+.|.+|.+++++||+++|.+|++|++
T Consensus 16 ~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~ 95 (130)
T 2lgo_A 16 TQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEK 95 (130)
T ss_dssp SCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEE
T ss_pred cceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCE
Confidence 345588999999 999999943399999999999999889999999988778999999999999999999999999999
Q ss_pred EEEEecCCcccCCCCCCCCCCCCCcEEEEEEEEEE
Q 008400 109 AVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (567)
Q Consensus 109 ~~i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~ 143 (567)
++|.|||++|||+.+.++.|||+++++|+|+|+++
T Consensus 96 ~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 96 ALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp EEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred EEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999999988889999999999999874
No 19
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.90 E-value=6.9e-24 Score=184.49 Aligned_cols=125 Identities=35% Similarity=0.630 Sum_probs=103.6
Q ss_pred CCCCCcCccCCceee--ecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEc-CCCEEeecCCCCCcEEEEccCCcchHH
Q 008400 19 LPDDAPMMKVGEEKE--IGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKG 95 (567)
Q Consensus 19 ~~~~~~~~~~~~~~~--~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~-~g~~~~~t~~~~~p~~~~lG~~~~i~g 95 (567)
.+...|+..+..... ++++|++|+++++|+| ..+..||.|.|||++++. +|++|++++.+++|+.|.+|.+++|+|
T Consensus 6 ~~~~~~~~~~~~~~~~v~~~~gl~~~vl~~G~g-~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G 84 (134)
T 3b7x_A 6 APGQSLYERLSQRMLDISGDRGVLKDVIREGAG-DLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWG 84 (134)
T ss_dssp ---CCHHHHHTTTCEESSSSSSEEEEEEECCEE-EECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHH
T ss_pred CCCCChhHHhccccceeeCCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHH
Confidence 345566666554442 3799999999999999 778899999999999988 699999998767899999999999999
Q ss_pred HHHHhcccccccEEEEEecCCcccCCCCCCCCCCCCCcEEEEEEEEEEe
Q 008400 96 WDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (567)
Q Consensus 96 l~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~ 144 (567)
|++||.+|++|++++|+|||++|||+.+.++.|||+++++|+|+|+++.
T Consensus 85 ~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 85 MELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp HHHHHHTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred HHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 9999999999999999999999999999888899999999999999884
No 20
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.89 E-value=8.1e-23 Score=175.99 Aligned_cols=112 Identities=38% Similarity=0.661 Sum_probs=104.3
Q ss_pred eeecCCCeEEEEEEccc--CCCCCCCCCEEEEEEEEEEc-CCCEEeecCC--CCCcEEEEccCCcchHHHHHHhcccccc
Q 008400 32 KEIGNQGLKKKLVKEGE--GWDTPENGDEVEVHYTGTLL-DGTQFDSSRD--RSTPFKFTLGQGNVIKGWDIGIKTMKKG 106 (567)
Q Consensus 32 ~~~~~~g~~~~~~~~G~--G~~~~~~gd~V~v~Y~~~~~-~g~~~~~t~~--~~~p~~~~lG~~~~i~gl~~~l~~m~~G 106 (567)
..++++|++|+++++|+ | ..++.||.|.|||++++. ||++|++++. .+.|+.|.+|.+++|+||+++|.+|++|
T Consensus 7 ~~~~~~gl~~~~l~~g~~~g-~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 7 ALIPEPEVKIEVLQKPFICH-RKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp GGCCCCCCEEEEEECCSCCS-CCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred eEECCCCeEEEEEEcCCCCC-CcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 34588999999999999 6 889999999999999998 9999999973 3589999999999999999999999999
Q ss_pred cEEEEEecCCcccCCCCCCCCCCCCCcEEEEEEEEEEee
Q 008400 107 ENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (567)
Q Consensus 107 e~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~ 145 (567)
++++|.|||++|||+.+.+ .||++++++|+|+|+++.+
T Consensus 86 e~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 86 EKRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp CEEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred CEEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 9999999999999999965 8999999999999999875
No 21
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.89 E-value=4.1e-23 Score=185.21 Aligned_cols=112 Identities=43% Similarity=0.696 Sum_probs=105.0
Q ss_pred eeecCCCeEEEEEEcccCCCC-CCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEE
Q 008400 32 KEIGNQGLKKKLVKEGEGWDT-PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (567)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~-~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~ 110 (567)
...+++|++|+++++|+| .. |..||.|.|||++++.||++|++++.++.|+.|.+| ++|+||+++|.+|++|++++
T Consensus 32 ~~~~~sGl~~~vl~~G~G-~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Ge~~~ 108 (167)
T 1jvw_A 32 AVKLPSGLVFQRIARGSG-KRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRPN--EVIKGWTEALQLMREGDRWR 108 (167)
T ss_dssp EEECTTSCEEEEEECCCC-SBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECGG--GSCHHHHHHHTTCCTTCEEE
T ss_pred cEECCCCEEEEEEEcCCC-CcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEeC--chhHHHHHHHcCCCCCCEEE
Confidence 456899999999999999 66 999999999999998899999999876689999996 89999999999999999999
Q ss_pred EEecCCcccCCCCCCCCCCCCCcEEEEEEEEEEeec
Q 008400 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSV 146 (567)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~~ 146 (567)
|+|||++|||..+.++.||||++++|+|+|+++...
T Consensus 109 ~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~ 144 (167)
T 1jvw_A 109 LFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDG 144 (167)
T ss_dssp EEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGG
T ss_pred EEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcC
Confidence 999999999999988899999999999999999753
No 22
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.89 E-value=2.4e-23 Score=184.69 Aligned_cols=115 Identities=26% Similarity=0.449 Sum_probs=98.4
Q ss_pred ecCCCeEEEEEEcccCCCCC--CCCCEEEEEEEEEEcC--CCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEE
Q 008400 34 IGNQGLKKKLVKEGEGWDTP--ENGDEVEVHYTGTLLD--GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (567)
Q Consensus 34 ~~~~g~~~~~~~~G~G~~~~--~~gd~V~v~Y~~~~~~--g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~ 109 (567)
++.+||+|+++++|+| ..| ..||.|.|||++++.| |++||||+.+++|+.|.+|.+++|+||++||.+|++|+++
T Consensus 7 ~~~~Gv~~~vl~~G~G-~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRG-ELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HHTTSCCCCEEECCSS-CCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred ccCCCeEEEEEECCcC-CCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 5789999999999999 544 5799999999999864 9999999999999999999999999999999999999999
Q ss_pred EEEecCCcccCCC-------C-CCCC-----------------------------CCCCCcEEEEEEEEEEeecccc
Q 008400 110 VFTIPPELAYGES-------G-SPPT-----------------------------IPPNATLQFDVELLSWTSVKDI 149 (567)
Q Consensus 110 ~i~ip~~~ayg~~-------~-~~~~-----------------------------ip~~~~l~~~vel~~~~~~~~~ 149 (567)
+|+|||++|||.. + .... ++++++|+|+|||++|..+...
T Consensus 86 ~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ey 162 (165)
T 2lkn_A 86 QFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTY 162 (165)
T ss_dssp EEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTC
T ss_pred EEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCccc
Confidence 9999999999921 0 0011 2344789999999999876543
No 23
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.89 E-value=3.1e-22 Score=173.22 Aligned_cols=112 Identities=46% Similarity=0.833 Sum_probs=101.3
Q ss_pred eecCCCe-EEEEEEcc---cCCCCCCCCCEEEEEEEEEE-cCCCEEeecCCCCCcEEEEccCCcchHHHHHHhccccccc
Q 008400 33 EIGNQGL-KKKLVKEG---EGWDTPENGDEVEVHYTGTL-LDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGE 107 (567)
Q Consensus 33 ~~~~~g~-~~~~~~~G---~G~~~~~~gd~V~v~Y~~~~-~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge 107 (567)
.++++|+ +++++++| +| ..|..||.|.|||++++ .||++|++++..+.|+.|.+|.+++++||+++|.+|++|+
T Consensus 11 ~~~~~g~~~~~il~~G~~g~g-~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge 89 (129)
T 2vn1_A 11 ELTADGGVIKTILKKGDEGEE-NIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNE 89 (129)
T ss_dssp ECSTTSSEEEEEEECCCCSGG-GSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTC
T ss_pred EECCCCCEEEEEEeCCCCCCC-CcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCC
Confidence 3456665 45789966 45 78999999999999998 7999999998767899999999999999999999999999
Q ss_pred EEEEEecCCcccCCCCCCCCCCCCCcEEEEEEEEEEee
Q 008400 108 NAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (567)
Q Consensus 108 ~~~i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~ 145 (567)
+++|.|||++|||+.+.++.||++++++|+|+|+++..
T Consensus 90 ~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 90 KCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999999999999998888999999999999999875
No 24
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.89 E-value=1.3e-22 Score=188.50 Aligned_cols=106 Identities=34% Similarity=0.616 Sum_probs=101.4
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEE
Q 008400 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (567)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ 112 (567)
..+++|++|+++++|+| ..|..||.|.|||++++.||++|+++ +.|+.|.+| ++|+||+++|.+|++|++++|+
T Consensus 113 ~~~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 113 KELADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp EECGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred EECCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 45899999999999999 89999999999999999999999999 589999998 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCcEEEEEEEEEEe
Q 008400 113 IPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (567)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~ 144 (567)
|||++|||..+.++.|||+++++|+|+|++|+
T Consensus 187 IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 99999999999888899999999999999985
No 25
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.89 E-value=1.7e-22 Score=188.62 Aligned_cols=111 Identities=52% Similarity=0.873 Sum_probs=105.6
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEE
Q 008400 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (567)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i 111 (567)
...+++|++|+++++|+| ..|..||.|.|||++++.||++|++++..+.|+.|.+|.+++++||++||.+|++|++++|
T Consensus 99 ~~~~~sGl~~~vl~~G~G-~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v 177 (209)
T 3uf8_A 99 VVTTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 177 (209)
T ss_dssp CEECTTSCEEEEEECCCS-CBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEE
T ss_pred ccCCCCceEEEEEEcCCC-CcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEE
Confidence 355899999999999999 7899999999999999999999999988778999999999999999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCcEEEEEEEEEE
Q 008400 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSW 143 (567)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~ 143 (567)
.|||++|||+.+.++.|||+++++|+|+|+++
T Consensus 178 ~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 178 TIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp EECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 99999999999988889999999999999874
No 26
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.88 E-value=2.4e-22 Score=187.17 Aligned_cols=111 Identities=36% Similarity=0.624 Sum_probs=104.7
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEE
Q 008400 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVF 111 (567)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i 111 (567)
...+++|++|+++++|+| ..|..||.|.|||++++.||++|++++.++.|+.|.+| ++|+||+++|.+|++|++++|
T Consensus 101 v~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v 177 (213)
T 1fd9_A 101 VVVLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQVS--QVIPGWTEALQLMPAGSTWEI 177 (213)
T ss_dssp EEECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEGG--GSCHHHHHHHTTCCTTCEEEE
T ss_pred cEECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEcC--chhhHHHHHHcCCCCCCEEEE
Confidence 356899999999999999 89999999999999999999999999876789999996 899999999999999999999
Q ss_pred EecCCcccCCCCCCCCCCCCCcEEEEEEEEEEee
Q 008400 112 TIPPELAYGESGSPPTIPPNATLQFDVELLSWTS 145 (567)
Q Consensus 112 ~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~~ 145 (567)
+|||++|||+.+.++.|||+++++|+|+|+++..
T Consensus 178 ~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 178 YVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred EECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 9999999999998888999999999999999864
No 27
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.88 E-value=9.6e-23 Score=176.24 Aligned_cols=111 Identities=41% Similarity=0.706 Sum_probs=103.3
Q ss_pred eeecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcc------ccc
Q 008400 32 KEIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKT------MKK 105 (567)
Q Consensus 32 ~~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~------m~~ 105 (567)
...+++|++|+++++|+| ..++.||.|.|||++++.||++|++++.+++|+.|.+|.+++|+||+++|.| |++
T Consensus 7 ~~~~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~ 85 (129)
T 1u79_A 7 FSVSPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLT 85 (129)
T ss_dssp CEECTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBT
T ss_pred cEECCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCC
Confidence 345889999999999999 8899999999999999889999999986568999999999999999999999 999
Q ss_pred ccEEEEEecCCcccCCCCCC-----CCCCCCCcEEEEEEEEEE
Q 008400 106 GENAVFTIPPELAYGESGSP-----PTIPPNATLQFDVELLSW 143 (567)
Q Consensus 106 Ge~~~i~ip~~~ayg~~~~~-----~~ip~~~~l~~~vel~~~ 143 (567)
|++++|.|||++|||+.+.+ +.||++++++|+|+|+++
T Consensus 86 Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 86 GGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999999863 479999999999999986
No 28
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=176.91 Aligned_cols=110 Identities=34% Similarity=0.574 Sum_probs=102.4
Q ss_pred eecCCCe-EEEEEEcccCCC--CCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEE
Q 008400 33 EIGNQGL-KKKLVKEGEGWD--TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (567)
Q Consensus 33 ~~~~~g~-~~~~~~~G~G~~--~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~ 109 (567)
.++++|+ +|+++++|+| . .|..||.|.|||++++.||++|+++ +|+.|.+|.+++|+||+++|.+|++|+++
T Consensus 38 ~~~~sG~v~~~vl~~G~G-~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~ 112 (157)
T 2jwx_A 38 DILGNGLLRKKTLVPGPP-GSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 112 (157)
T ss_dssp ESSSSSSEEEEEEECCST-TSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTTSCTTCEE
T ss_pred eECCCCCEEEEEEEccCC-CccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcCCCCCCEE
Confidence 4678886 8999999999 5 8999999999999999899999984 79999999999999999999999999999
Q ss_pred EEEecCCcccCCCC-CCCCCCCCCcEEEEEEEEEEeecc
Q 008400 110 VFTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSVK 147 (567)
Q Consensus 110 ~i~ip~~~ayg~~~-~~~~ip~~~~l~~~vel~~~~~~~ 147 (567)
+|+|||++|||..+ .++.||++++++|+|+|+++....
T Consensus 113 ~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 113 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred EEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 99999999999999 677899999999999999997654
No 29
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.88 E-value=5.4e-22 Score=168.91 Aligned_cols=108 Identities=34% Similarity=0.563 Sum_probs=100.3
Q ss_pred eecCCC-eEEEEEEcccCC-CCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEE
Q 008400 33 EIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAV 110 (567)
Q Consensus 33 ~~~~~g-~~~~~~~~G~G~-~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~ 110 (567)
.++++| ++|+++++|+|. ..|+.||.|.|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|++++
T Consensus 8 ~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~ 83 (118)
T 2awg_A 8 DILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETAM 83 (118)
T ss_dssp ESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGGSCTTCEEE
T ss_pred EECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhCCCCCCEEE
Confidence 456777 999999999993 27999999999999998899999984 799999999999999999999999999999
Q ss_pred EEecCCcccCCCCCCCCCCCCCcEEEEEEEEEEe
Q 008400 111 FTIPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (567)
Q Consensus 111 i~ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~ 144 (567)
|.|||++|||..+.++.||++++++|+|+|++++
T Consensus 84 ~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 84 VTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 9999999999999888899999999999999875
No 30
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.87 E-value=9.9e-22 Score=184.26 Aligned_cols=108 Identities=49% Similarity=0.915 Sum_probs=101.7
Q ss_pred eecCCCeEEEEEEcccCCCCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEE
Q 008400 33 EIGNQGLKKKLVKEGEGWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFT 112 (567)
Q Consensus 33 ~~~~~g~~~~~~~~G~G~~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ 112 (567)
.++++|++|+++++|+| ..|..||.|.|||++++.||++|++++.++.|+.|.+| ++|+||+++|.+|++|++++|+
T Consensus 117 ~~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~lg--~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 117 KTSSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp EECTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEGG--GSCHHHHHHGGGSCTTCEEEEE
T ss_pred EECCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEcC--CcchhHHHHHcCCCCCCEEEEE
Confidence 34789999999999999 89999999999999999999999999887789999996 8999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCcEEEEEEEEEEe
Q 008400 113 IPPELAYGESGSPPTIPPNATLQFDVELLSWT 144 (567)
Q Consensus 113 ip~~~ayg~~~~~~~ip~~~~l~~~vel~~~~ 144 (567)
|||+++||+.+.++ |||+++++|+|+|++++
T Consensus 194 IP~~laYG~~g~~~-IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 194 IPPELAYGKAGVPG-IPPNSTLVFDVELLDVK 224 (224)
T ss_dssp ECGGGTTTTTCBTT-BCTTCCEEEEEEEEEEC
T ss_pred ECchhhcCcCCCCC-CCCCCEEEEEEEEEEeC
Confidence 99999999999875 99999999999999873
No 31
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=9.4e-22 Score=171.19 Aligned_cols=113 Identities=34% Similarity=0.539 Sum_probs=103.2
Q ss_pred eeecCCC-eEEEEEEcccCC-CCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEE
Q 008400 32 KEIGNQG-LKKKLVKEGEGW-DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENA 109 (567)
Q Consensus 32 ~~~~~~g-~~~~~~~~G~G~-~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~ 109 (567)
..++++| ++|+++++|+|. ..|..||.|.|||++++.||++|+++ +|+.|.+|.+++++||+++|.+|++|+++
T Consensus 11 ~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~ 86 (135)
T 2d9f_A 11 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPLMDVGETA 86 (135)
T ss_dssp EESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGGSCTTCEE
T ss_pred cEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 4556777 999999999992 28999999999999999899999973 79999999999999999999999999999
Q ss_pred EEEecCCcccCCCC-CCCCCCCCCcEEEEEEEEEEeeccc
Q 008400 110 VFTIPPELAYGESG-SPPTIPPNATLQFDVELLSWTSVKD 148 (567)
Q Consensus 110 ~i~ip~~~ayg~~~-~~~~ip~~~~l~~~vel~~~~~~~~ 148 (567)
+|.|||++|||..+ .++.|||+++++|+|+|+++....+
T Consensus 87 ~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 87 MVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp EEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCS
T ss_pred EEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCc
Confidence 99999999999998 6778999999999999999986544
No 32
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.87 E-value=5.5e-22 Score=201.70 Aligned_cols=271 Identities=22% Similarity=0.281 Sum_probs=195.6
Q ss_pred ccccccccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeeccceEEEecCCC---CcchHHHHHhhccCCcEEE
Q 008400 146 VKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVEFTVKDGH---FCPTLAKAVKTMKKGEKVL 222 (567)
Q Consensus 146 ~~~~~~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~~g~~~---~~~gl~~~l~~m~~Ge~~~ 222 (567)
..+++.++++.+++++.|.|...|..|+.|+|+|++++ +|++|+++ |+.|.+|.|. ++++|+++|.+|+.|+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~ 95 (336)
T 1p5q_A 18 GSHMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-ELRFEIGEGENLDLPYGLERAIQRMEKGEHSI 95 (336)
T ss_dssp ----CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEE
T ss_pred ceeecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-CeEEEeCCCCccccchHHHHHHhcCCCCCeEE
Confidence 34567789999999999999778999999999999999 89999887 8999999886 5899999999999999999
Q ss_pred EEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeeecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecC
Q 008400 223 LAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQD 302 (567)
Q Consensus 223 i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~ 302 (567)
+.|||+++||..|.+. ..||+++++.|++.|.+|........ +.+. ..|..
T Consensus 96 l~i~p~~ayg~~g~~~----~~i~~~~~l~f~~~L~~~~~A~~~~~------~a~~-----~~p~~-------------- 146 (336)
T 1p5q_A 96 VYLKPSYAFGSVGKEK----FQIPPNAELKYELHLKSFEKAKESWE------MNSE-----EKLEQ-------------- 146 (336)
T ss_dssp EEECTTTTTTTTCBGG----GTBCSSCCEEEEEEEEEEECCCCGGG------CCHH-----HHHHH--------------
T ss_pred EEECCccccCcCCCCc----cCCCCCCeEEEEEEEeecccccchhc------CCHH-----HHHHH--------------
Confidence 9999999999888641 25899999999999998754222110 0000 00000
Q ss_pred CcEEEeccCCCCcccEEEEcCcc-chhhHHHHHHhccCCCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 303 GTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 303 g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
.... . .. ...-+..|+. .-+..++.++... |. ...+
T Consensus 147 a~~~----~-~~-g~~~~~~g~~~~A~~~y~~Al~~~-----------p~-----------------~~~~--------- 183 (336)
T 1p5q_A 147 STIV----K-ER-GTVYFKEGKYKQALLQYKKIVSWL-----------EY-----------------ESSF--------- 183 (336)
T ss_dssp HHHH----H-HH-HHHHHHHTCHHHHHHHHHHHHHHT-----------TT-----------------CCCC---------
T ss_pred HHHH----H-HH-HHHHHHCCCHHHHHHHHHHHHHHh-----------hc-----------------cccC---------
Confidence 0000 0 00 0000111211 1223344444221 10 0000
Q ss_pred eecccccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc
Q 008400 382 EKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL 461 (567)
Q Consensus 382 ~~~~~~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~ 461 (567)
. .....+.....+..+.+.|..+++.|+|++|+..|++|+.+.+.+. .+++++|.+|..+
T Consensus 184 ~-----~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~ 243 (336)
T 1p5q_A 184 S-----NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNE---------------KGLSRRGEAHLAV 243 (336)
T ss_dssp C-----SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHT
T ss_pred C-----hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHC
Confidence 0 0001122334477889999999999999999999999999876533 4589999999999
Q ss_pred cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHH-HHHHHHHHH
Q 008400 462 KDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLA-EFDIKKALE 510 (567)
Q Consensus 462 ~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A-~~~~~~al~ 510 (567)
++|++|+.+++++++++|++..++++++.++..++++++| ...|++++.
T Consensus 244 g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 244 NDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 456666664
No 33
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.86 E-value=1.4e-21 Score=176.43 Aligned_cols=154 Identities=29% Similarity=0.392 Sum_probs=131.7
Q ss_pred hHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccC---CCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHH
Q 008400 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT---SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAE 468 (567)
Q Consensus 392 ~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~---~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai 468 (567)
.++++..+..+++.|+.+|+.|+|.+|+..|.+|+.+++... ....++..........+|+|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 457788999999999999999999999999999999865421 22334556667788899999999999999999999
Q ss_pred HHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 469 KLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR-DVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 469 ~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~-~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
.+|+++|+++|+++++|+++|.+|..+|+|++|+.+|++|++++|+|. .+...+..+..++++.++++++.|++||+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999998 88999999999999999999999999996
No 34
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.84 E-value=9.8e-21 Score=156.84 Aligned_cols=96 Identities=52% Similarity=0.898 Sum_probs=90.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCC
Q 008400 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (567)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (567)
..++.||.|.|||++++.||++|++++.+++|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+.+.++.||+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~ 83 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPG 83 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCT
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCc
Confidence 67899999999999998899999999876689999999999999999999999999999999999999999998888999
Q ss_pred CCcEEEEEEEEEEeec
Q 008400 131 NATLQFDVELLSWTSV 146 (567)
Q Consensus 131 ~~~l~~~vel~~~~~~ 146 (567)
+++++|+|+|+++...
T Consensus 84 ~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 84 GATLVFEVELLKIERR 99 (102)
T ss_dssp TCCEEEEEEEEEEGGG
T ss_pred CCeEEEEEEEEEeccc
Confidence 9999999999998753
No 35
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.84 E-value=4e-20 Score=162.66 Aligned_cols=116 Identities=39% Similarity=0.599 Sum_probs=106.2
Q ss_pred ceeeee--cCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccC
Q 008400 262 TVSEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMK 339 (567)
Q Consensus 262 ~~~d~~--~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~ 339 (567)
..+|++ .|++++++++++|.|...|..++.|+|||++++.||++|+++. .++.|++|.+|.+.+|+||+.+|..|+
T Consensus 25 ~~~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~~i~G~e~~l~gm~ 102 (144)
T 3o5e_A 25 QGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMK 102 (144)
T ss_dssp HCEECCSSCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESG--GGTSCEEEETTSSSSCHHHHHHHTTCC
T ss_pred ccccccccCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeec--ccCCCeEEEeCCCcccHHHHHHHhCCC
Confidence 346677 7999999999999997789999999999999999999999865 357899999999999999999999999
Q ss_pred CCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEee
Q 008400 340 KNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (567)
Q Consensus 340 ~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~ 382 (567)
+||++.|.|+|.++||+.+.. ..|||+++|+|+|+|+++.
T Consensus 103 ~Ge~~~v~ipp~~aYG~~g~~---~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 103 KGEICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp BTCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CCCEEEEEEChHHCcCCCCCC---CCcCCCCeEEEEEEEEEec
Confidence 999999999999999998865 4799999999999999886
No 36
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.82 E-value=7.4e-20 Score=159.18 Aligned_cols=118 Identities=32% Similarity=0.594 Sum_probs=100.3
Q ss_pred cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEecCCCCcchHHHHHhhccCCcEEEEEec
Q 008400 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK 226 (567)
Q Consensus 151 ~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip 226 (567)
.++++.++++++|+|...+..+|.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.||
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~ip 91 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIR 91 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEEEC
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEEEC
Confidence 678999999999999768999999999999999999999986 7999999999999999999999999999999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecccceeeee--cCcceeE
Q 008400 227 PQYGFGEKGKSASGNEGAVPPNATLQIALELVSWKTVSEIT--DDKKVIK 274 (567)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~~~~d~~--~d~~v~k 274 (567)
|+++||+.|.+ +.|||+++|+|+|+|+++.. .++. +|++|+|
T Consensus 92 ~~~aYG~~g~~-----~~Ip~~~~l~f~v~l~~i~~-~~l~~~~d~~v~k 135 (135)
T 1r9h_A 92 SDYGYGDAGSP-----PKIPGGATLIFEVELFEWSA-EDISPDRDGTILR 135 (135)
T ss_dssp GGGTTTTTCBT-----TTBCTTCCEEEEEEEEEEEC--------------
T ss_pred hHHcCCCCCCC-----CCcCcCCcEEEEEEEEEeec-CCcCcCCCCcccC
Confidence 99999998764 57999999999999999976 4666 6777765
No 37
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.82 E-value=1.5e-19 Score=155.97 Aligned_cols=114 Identities=39% Similarity=0.619 Sum_probs=103.9
Q ss_pred eeee--cCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCC
Q 008400 264 SEIT--DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (567)
Q Consensus 264 ~d~~--~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~G 341 (567)
+|++ .|+++.++++++|.|...|..++.|+|||++++.||++|+++. .++.|++|.+|.+.+|+||+.+|..|++|
T Consensus 11 ~di~~~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~~i~G~e~~l~gm~~G 88 (128)
T 3o5q_A 11 EDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSH--DRNEPFVFSLGKGQVIKAWDIGVATMKKG 88 (128)
T ss_dssp EECCSSCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHH--HHTSCEEEETTSSSSCHHHHHHHTTCCTT
T ss_pred ceecccCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecC--CCCCCEEEEECCCCccHHHHHHHhcCCCC
Confidence 4444 6899999999999997789999999999999999999999864 24679999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEee
Q 008400 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (567)
Q Consensus 342 E~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~ 382 (567)
|++.|.|++.++||+.+.. ..|||+++|+|+|+|+++.
T Consensus 89 e~~~v~ip~~~aYG~~g~~---~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 89 EICHLLCKPEYAYGSAGSL---PKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp CEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CEEEEEEChHHcCCCCCCC---CCcCCCCEEEEEEEEEEec
Confidence 9999999999999998765 3799999999999999886
No 38
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.82 E-value=1.5e-19 Score=164.68 Aligned_cols=127 Identities=35% Similarity=0.503 Sum_probs=102.3
Q ss_pred CcceeEEEEeCCCCCCCCCCCCEEEEEEEEEec-CCcEEEeccCCCCcccEEEEcCcc-chhhHHHHHHhccCCCcEEEE
Q 008400 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEE-QVIDGLDRAVITMKKNEVALL 346 (567)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~-~g~~~~~~~~~~~~~~~~~~lg~~-~vi~gle~~l~~M~~GE~~~v 346 (567)
+.++.++++++|.|. .|..|+.|+|||++++. +|++|+++.. ++.|+.|.+|.+ .+|+||+.+|..|++||++.|
T Consensus 48 ~~gl~~~vl~~G~G~-~~~~Gd~V~v~Y~g~l~~dG~~fdss~~--~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v 124 (180)
T 2f4e_A 48 DEKVSKQIIKEGHGS-KPSKYSTCFLHYRAWTKNSQHKFEDTWH--EQQPIELVLGKEKKELAGLAIGVASMKSGERALV 124 (180)
T ss_dssp ETTEEEEEEECCBSC-CBCTTCEEEEEEEEEETTTCCEEEETTT--TTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEE
T ss_pred CCceEEEEEeCCCCC-CCCCCCEEEEEEEEEECCCCcEEeccCc--cCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEE
Confidence 457999999999995 89999999999999998 5999998753 568999999999 999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCccEEEEEEEEEeeeccc---ccCCChHHHHHHH
Q 008400 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKE---SWDMNTEEKIEAA 399 (567)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~~---~~~~~~~e~~~~a 399 (567)
.|++.++||..+... ...||++++|+|+|+|+++....+ .|+|+.++++..|
T Consensus 125 ~iPp~~aYG~~g~~~-~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 125 HVGWELAYGKEGNFS-FPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EECGGGTTTTTCBSS-SSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EECchHhCCcCCccc-CCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 999999999887531 246999999999999999998777 8999999998876
No 39
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.81 E-value=3.2e-20 Score=164.64 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=78.2
Q ss_pred cCcceeEEEEeCCCCCCC-CCCCCEEEEEEEEEecC--CcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEE
Q 008400 268 DDKKVIKKILKEGDGFER-PNEGAVVKVKLIGKLQD--GTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVA 344 (567)
Q Consensus 268 ~d~~v~k~il~~G~g~~~-p~~~~~v~v~y~~~l~~--g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~ 344 (567)
.+.+|.|+||++|.|... +..|++|+|||+++|.| |++||+++. ++.|++|.+|.+++|+||+.+|.+|++||++
T Consensus 8 ~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~--rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~ 85 (165)
T 2lkn_A 8 REDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRA--RGKPMELIIGKKFKLPVWETIVCTMREGEIA 85 (165)
T ss_dssp HTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTT--TTCCEEEESSSSCSCSHHHHHHTTCCTTCEE
T ss_pred cCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEeccc--CCCCEEEEecCCCccHHHHHHHhcCccCceE
Confidence 467899999999999532 35799999999999965 999999874 7899999999999999999999999999999
Q ss_pred EEEEcCCCccC
Q 008400 345 LLTIAPEYAFG 355 (567)
Q Consensus 345 ~v~i~~~~~yg 355 (567)
.|+|+|+++||
T Consensus 86 ~~~ipp~laYG 96 (165)
T 2lkn_A 86 QFLCDIKHVVL 96 (165)
T ss_dssp EEECCHHHHSS
T ss_pred EEEECHHHhcC
Confidence 99999999999
No 40
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.81 E-value=3.2e-19 Score=152.13 Aligned_cols=111 Identities=41% Similarity=0.624 Sum_probs=99.6
Q ss_pred CcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCC-----CCcccEEEEcCccchhhHHHHHHhccCCCcE
Q 008400 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHS-----EEEQLFEFKTDEEQVIDGLDRAVITMKKNEV 343 (567)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~-----~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~ 343 (567)
..++.|+|+++|+|...|..++.|+|||.+++.||++|+++... ....|++|.+|.+.+|+||+.+|..|++||+
T Consensus 3 p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~ 82 (119)
T 3kz7_A 3 PPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEK 82 (119)
T ss_dssp SCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCE
T ss_pred CCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCE
Confidence 45799999999999778999999999999999999999987531 1248999999999999999999999999999
Q ss_pred EEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 344 ALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 344 ~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
+.|.|++.++||+.+... ..|||+++|+|+|+|+++
T Consensus 83 ~~v~ip~~~aYG~~g~~~--~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 83 ARLEIEPEWAYGKKGQPD--AKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp EEEEECGGGTTCTTCBGG--GTBCTTCCEEEEEEEEEE
T ss_pred EEEEECcHHhcCCCCCCC--CccCcCCeEEEEEEEEEe
Confidence 999999999999987643 369999999999999876
No 41
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.81 E-value=1.1e-18 Score=162.96 Aligned_cols=179 Identities=32% Similarity=0.457 Sum_probs=139.8
Q ss_pred EEEEEEEEEeeecccccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChH-HHHHHHHHHHHH
Q 008400 372 VHYEVELVSFEKEKESWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVAC 450 (567)
Q Consensus 372 l~f~ieL~~~~~~~~~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e-~~~~~~~~~~~~ 450 (567)
......+..+.+..+.|.++.+++...+..++..|+.++..|+|.+|+..|.+|+.+.+........ .......+...+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISC 90 (198)
T ss_dssp -----------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 3344556788889999999999999999999999999999999999999999999988776543322 333345556788
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
++|+|.||+++++|++|+.+|++++.++|.++++++++|.+|..+|++++|+.+|+++++++|++..+...+..+...++
T Consensus 91 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 170 (198)
T 2fbn_A 91 NLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLK 170 (198)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhhhhc
Q 008400 531 EYNKKEAKFYGNMFAKMKSR 550 (567)
Q Consensus 531 ~~~~~e~~~~~~~f~~~~~~ 550 (567)
+..+.+++.|++||++...-
T Consensus 171 ~~~~~~~~~~~~~f~~~~~~ 190 (198)
T 2fbn_A 171 EARKKDKLTFGGMFDKGPLY 190 (198)
T ss_dssp HHHC----------------
T ss_pred HHHHHHHHHHHHHhcccchh
Confidence 99999999999999865443
No 42
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.79 E-value=6.4e-19 Score=152.20 Aligned_cols=114 Identities=31% Similarity=0.492 Sum_probs=107.3
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
+.|+.++++|+.+|+.|+|++|+..|++|+++.|.+. .+|+|+|.||.++|++++|+.+|+++++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA---------------ILYSNRAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHhhHHHhhccHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999877644 3489999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
++|+++++|+++|.+|..+|++++|+.+|+++++++|+|.+++..++.|
T Consensus 76 ~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999998888776
No 43
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.78 E-value=3.5e-19 Score=154.72 Aligned_cols=115 Identities=29% Similarity=0.496 Sum_probs=97.8
Q ss_pred ceeeeecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEec-CCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCC
Q 008400 262 TVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (567)
Q Consensus 262 ~~~d~~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~-~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (567)
.+.+++.++++.++++++|.|. .+..++.|+|||++++. +|++|+++.. +..|++|.+|.+.+|+||+.+|..|++
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g~-~~~~gd~V~v~Y~g~l~~~G~~fdss~~--~~~p~~f~lG~g~~i~G~e~aL~gm~~ 94 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAGD-LVAPDASVLVKYSGYLEHMDRPFDSNYF--RKTPRLMKLGEDITLWGMELGLLSMRR 94 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEEE-ECCTTCEEEEEEEEECTTCSSCSEEC---------CEEC-CCCCCHHHHHHHHTCEE
T ss_pred ccceeeCCCCEEEEEEEcCCCC-CCCCCCEEEEEEEEEECCCCeEEEecCC--CCCCEEEEcCCcchhHHHHHHHhCCCC
Confidence 4578889999999999999995 57789999999999998 6999987642 468999999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEee
Q 008400 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (567)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~ 382 (567)
||++.|.|+++++||+.+..+ .|||+++++|+|+|+++.
T Consensus 95 Ge~~~v~ip~~~aYG~~~~~~---~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 95 GELARFLFKPNYAYGTLGCPP---LIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEC
T ss_pred CCEEEEEECHHHCcCCCCCCC---CcCcCCeEEEEEEEEEEe
Confidence 999999999999999987643 599999999999999875
No 44
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.78 E-value=2.2e-18 Score=146.45 Aligned_cols=111 Identities=30% Similarity=0.414 Sum_probs=101.4
Q ss_pred eeeeecCcceeEEEEeCCCCC-CCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCC
Q 008400 263 VSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (567)
Q Consensus 263 ~~d~~~d~~v~k~il~~G~g~-~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~G 341 (567)
+.++++++++.++++++|.|. ..|..++.|+|||.+++.+|++|++ ..|++|.+|.+.+++||+.+|..|++|
T Consensus 6 ~~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds------~~p~~f~lG~~~~i~g~e~~l~gm~~G 79 (118)
T 2awg_A 6 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDVG 79 (118)
T ss_dssp EEESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEE------EEEEEEETTSSCSCHHHHHHGGGSCTT
T ss_pred ceEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEEC------CCCEEEEECCCChhHHHHHHHhCCCCC
Confidence 467888999999999999985 3799999999999999999999985 368999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEee
Q 008400 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (567)
Q Consensus 342 E~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~ 382 (567)
|++.|.++++++||+.+.. ..|||++++.|+|+|+++.
T Consensus 80 e~~~~~ip~~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 80 ETAMVTADSKYCYGPQGRS---PYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp CEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEE
T ss_pred CEEEEEEChHHccCCCCCC---CccCCCCeEEEEEEEEEec
Confidence 9999999999999988754 3699999999999999875
No 45
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.78 E-value=2.7e-18 Score=148.45 Aligned_cols=115 Identities=38% Similarity=0.633 Sum_probs=102.2
Q ss_pred eeeecCcceeEEEEeCC-CC-CCCCCCCCEEEEEEEEEe-cCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCC
Q 008400 264 SEITDDKKVIKKILKEG-DG-FERPNEGAVVKVKLIGKL-QDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKK 340 (567)
Q Consensus 264 ~d~~~d~~v~k~il~~G-~g-~~~p~~~~~v~v~y~~~l-~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~ 340 (567)
.+.+.+|.++++++++| .| ...|..++.|+|||.+++ .+|++|+++.. ++.|++|.+|.+.+++||+.+|..|++
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~--~~~p~~f~lG~g~~i~g~e~~l~gm~~ 87 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFD--RNVPFKFHLEQGEVIKGWDICVSSMRK 87 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGG--TTCCEEEETTSSSSCHHHHHHHTTCCT
T ss_pred cEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCC--CCccEEEEeCCCCcCHHHHHHHhCCCC
Confidence 45568899999999987 55 267999999999999999 79999998752 468999999999999999999999999
Q ss_pred CcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeee
Q 008400 341 NEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (567)
Q Consensus 341 GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~ 383 (567)
||++.|.|++.++||+.+.. ..|||+++++|+|+|+++.+
T Consensus 88 Ge~~~v~ip~~~aYG~~~~~---~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 88 NEKCLVRIESMYGYGDEGCG---ESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TCEEEEEECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEEEC
T ss_pred CCEEEEEEChHHcCCCCCCC---CCcCCCCeEEEEEEEEEEec
Confidence 99999999999999998754 35999999999999999864
No 46
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.78 E-value=5.7e-19 Score=156.23 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=120.7
Q ss_pred HHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHH
Q 008400 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTK 473 (567)
Q Consensus 394 e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~ 473 (567)
.....|..+++.|+.+|+.|+|++|+..|++||++.|...... ..........+|+|+|.|+.++|+|++|+.+|++
T Consensus 6 ~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~---a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~k 82 (159)
T 2hr2_A 6 KEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE---AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADK 82 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS---CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh---hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3466789999999999999999999999999999998744321 0011223455899999999999999999999999
Q ss_pred Hhcc-------CCCCHHHH----HHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008400 474 VLDL-------DSRNVKAL----YRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (567)
Q Consensus 474 al~~-------~p~~~ka~----~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~ 535 (567)
||++ +|++.++| ||+|.++..+|++++|+.+|++|++++|++..+...+..+++.+++..++
T Consensus 83 AL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 83 ALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99999999 99999999999999999999999999999999999999888877766543
No 47
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.78 E-value=3.6e-18 Score=144.13 Aligned_cols=108 Identities=31% Similarity=0.500 Sum_probs=97.9
Q ss_pred CcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEEEE
Q 008400 269 DKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTI 348 (567)
Q Consensus 269 d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~i 348 (567)
+.++.++++++|.|..+|..++.|++||.+++.||++|+++.. ++.|++|.+|.+.+++||+.+|..|++||++.|.+
T Consensus 5 ~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~i 82 (113)
T 1yat_A 5 EGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVD--RGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTI 82 (113)
T ss_dssp GGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTT--TTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEEE
T ss_pred CCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCC--CCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 4569999999999965599999999999999999999998752 46899999999999999999999999999999999
Q ss_pred cCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 349 APEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 349 ~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
++.++||+.+.. ..|||+++++|+|+|+++
T Consensus 83 p~~~ayG~~~~~---~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 83 PGPYAYGPRGFP---GLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp CGGGTTTTTCBT---TTBCTTCCEEEEEEEEEE
T ss_pred CHHHCcCCCCCC---CCcCCCCeEEEEEEEEEe
Confidence 999999988764 359999999999999876
No 48
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.78 E-value=2.3e-18 Score=143.90 Aligned_cols=106 Identities=31% Similarity=0.591 Sum_probs=96.1
Q ss_pred ceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEEEEcC
Q 008400 271 KVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAP 350 (567)
Q Consensus 271 ~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~i~~ 350 (567)
++.++++++|+|...|..++.|++||.+++.||++|+++.. ++.|++|.+|.+.+++||+.+|..|++||++.+.+++
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~--~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~ip~ 78 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRD--RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISP 78 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHH--HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEEECG
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCC--CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEEECH
Confidence 47899999999976699999999999999999999998642 3579999999999999999999999999999999999
Q ss_pred CCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 351 EYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 351 ~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
.++||+.+.. ..|||++++.|+|+|+++
T Consensus 79 ~~ayG~~~~~---~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 79 DYAYGATGHP---GIIPPHATLVFDVELLKL 106 (107)
T ss_dssp GGTTTTTCBT---TTBCTTCCEEEEEEEEEE
T ss_pred HHccCCCCCC---CCcCCCCeEEEEEEEEEe
Confidence 9999988764 369999999999999876
No 49
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=152.02 Aligned_cols=114 Identities=30% Similarity=0.419 Sum_probs=102.2
Q ss_pred eeeecCcceeEEEEeCCCCC-CCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCc
Q 008400 264 SEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNE 342 (567)
Q Consensus 264 ~d~~~d~~v~k~il~~G~g~-~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE 342 (567)
.+.+++|.+.++++++|+|. ..|..++.|+|||.+++.||++|++ +.|++|.+|.+.+|+||+.+|..|++||
T Consensus 37 ~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds------~~p~~f~lG~g~vi~G~eeaL~gMk~Ge 110 (157)
T 2jwx_A 37 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDVGE 110 (157)
T ss_dssp EESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEE------EEEEEEETTTTSSCHHHHHHTTTSCTTC
T ss_pred ceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeec------CCCEEEEeCCCChhHHHHHHHcCCCCCC
Confidence 56778888899999999994 4799999999999999999999986 3689999999999999999999999999
Q ss_pred EEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeeecc
Q 008400 343 VALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEK 385 (567)
Q Consensus 343 ~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~ 385 (567)
++.|.|+++++||+.+... ..|||+++|+|+|+|+++.+..
T Consensus 111 ~~~v~IP~~~aYG~~g~~~--~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 111 TAMVTADSKYCYGPQGSRS--PYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp EEEEEECGGGTTTTTCCSS--SCCCTTCCEEEEEEEEEEEECS
T ss_pred EEEEEECchhcCCcccccC--CCcCCCCeEEEEEEEEEEEccc
Confidence 9999999999999887221 3699999999999999997654
No 50
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.76 E-value=3.6e-18 Score=146.83 Aligned_cols=114 Identities=21% Similarity=0.363 Sum_probs=100.9
Q ss_pred ecCcceeEEEEeCCCC-CCCCCCCCEEEEEEEEEec-CCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEE
Q 008400 267 TDDKKVIKKILKEGDG-FERPNEGAVVKVKLIGKLQ-DGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVA 344 (567)
Q Consensus 267 ~~d~~v~k~il~~G~g-~~~p~~~~~v~v~y~~~l~-~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~ 344 (567)
+.+.++.++++++|.+ ...|..++.|+|||++++. ||++|+++.......|++|.+|.+.+++||+.+|..|++||++
T Consensus 9 ~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~ 88 (125)
T 4dip_A 9 IPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVGEKR 88 (125)
T ss_dssp CCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTTCEE
T ss_pred ECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCCCEE
Confidence 4577899999999983 3689999999999999998 9999998752124689999999999999999999999999999
Q ss_pred EEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeeec
Q 008400 345 LLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKE 384 (567)
Q Consensus 345 ~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~ 384 (567)
.|.|++.++||+.+.. .|||+++|+|+|+|+++.+.
T Consensus 89 ~~~ip~~~aYG~~g~~----~Ip~~~~l~f~vel~~i~~~ 124 (125)
T 4dip_A 89 KLIIPPALGYGKEGKG----KIPPESTLIFNIDLLEIRNG 124 (125)
T ss_dssp EEEECGGGTTTTTCBT----TBCTTCCEEEEEEEEEEECC
T ss_pred EEEEChHHhcCCCCCC----CCCCCCeEEEEEEEEEEEcC
Confidence 9999999999998743 69999999999999998753
No 51
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.4e-18 Score=148.64 Aligned_cols=121 Identities=28% Similarity=0.371 Sum_probs=106.0
Q ss_pred eeeeecCcceeEEEEeCCCCC-CCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCC
Q 008400 263 VSEITDDKKVIKKILKEGDGF-ERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKN 341 (567)
Q Consensus 263 ~~d~~~d~~v~k~il~~G~g~-~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~G 341 (567)
+.++++++++.++++++|.|. ..|..++.|+|||++++.||++|++ ..|++|.+|.+.+++||+.+|..|++|
T Consensus 10 ~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds------~~p~~f~lG~g~~i~G~e~~L~gm~~G 83 (135)
T 2d9f_A 10 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE------EPELVFTLGDCDVIQALDLSVPLMDVG 83 (135)
T ss_dssp CEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE------EEEEEEETTSCCSCTTTTTTGGGSCTT
T ss_pred CcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec------CCCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 467788999999999999984 4799999999999999999999985 468999999999999999999999999
Q ss_pred cEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEeeecccccCCC
Q 008400 342 EVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMN 391 (567)
Q Consensus 342 E~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~~~~~~~ 391 (567)
|++.|.++++++||+.+... ..|||++++.|+|+|+++....+.-.++
T Consensus 84 e~~~v~ip~~~aYG~~~~~~--~~Ip~~~~l~f~vel~~v~~~~~~e~~s 131 (135)
T 2d9f_A 84 ETAMVTADSKYCYGPQGSRS--PYIPPHAALCLEVTLKTAVDRPDLEMSG 131 (135)
T ss_dssp CEEEEEECHHHHTCTTCCSS--SCCCTTCCEEEEEEEEEEESSCSSSSCC
T ss_pred CEEEEEEChhHccCcCCcCC--CccCCCCeEEEEEEEEEeecCCchhhcC
Confidence 99999999999999887322 3699999999999999998755543333
No 52
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.76 E-value=9.3e-18 Score=150.37 Aligned_cols=121 Identities=26% Similarity=0.408 Sum_probs=103.8
Q ss_pred cCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEEE
Q 008400 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (567)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~ 347 (567)
-+.++.++++++|.|...|..|+.|+|||.+++.||++|+++.. ++.|++|.+ +.+|+||+.+|..|++||++.|.
T Consensus 35 ~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~ 110 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRE--RGKPTTFRP--NEVIKGWTEALQLMREGDRWRLF 110 (167)
T ss_dssp CTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHH--HTSCEEECG--GGSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEe--CchhHHHHHHHcCCCCCCEEEEE
Confidence 46679999999999954499999999999999999999998752 458999999 47999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCccEEEEEEEEEeeecccccCCChHHHHH
Q 008400 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEKEKESWDMNTEEKIE 397 (567)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~~~~~~~~~~~e~~~ 397 (567)
||+.++||+.+.. ..||||++|+|+|+|+++.+. .+.++.++.-+
T Consensus 111 Ip~~laYG~~g~~---~~Ipp~s~LiF~VeL~~i~~~--~~~~~~~e~~~ 155 (167)
T 1jvw_A 111 IPYDLAYGVTGGG---GMIPPYSPLEFDVELISIKDG--GKGRTAEEVDE 155 (167)
T ss_dssp ECGGGTTTTTCSS---SSSCTTCCEEEEEEEEEEGGG--CCSCBHHHHHH
T ss_pred ECchhhCCCCCCC---CCcCCCCeEEEEEEEEEEEcC--CCCCCHHHHHH
Confidence 9999999998764 369999999999999999853 44566655433
No 53
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.75 E-value=1.2e-17 Score=144.48 Aligned_cols=109 Identities=34% Similarity=0.537 Sum_probs=98.6
Q ss_pred ecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEE
Q 008400 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (567)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (567)
+.+.++.++++++|.| ..|..|+.|+|||.+++.||++|+++. +.+.|++|.+|.+.+++||+.+|..|++||++.|
T Consensus 25 ~~~~gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge~~~v 101 (133)
T 2y78_A 25 TTESGLKYEDLTEGSG-AEARAGQTVSVHYTGWLTDGQKFDSSK--DRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRL 101 (133)
T ss_dssp ECTTSCEEEEEECCSS-CBCCTTSEEEEEEEEEETTSCEEEETT--TTTCCEEEETTSSSSCHHHHHHSTTCBTTCEEEE
T ss_pred ECCCCEEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEeccC--cCCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEE
Confidence 4567899999999999 579999999999999999999999875 2468999999999999999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
.|++.++||+.+.. ..|||+++++|+|+|+++
T Consensus 102 ~ip~~~aYG~~~~~---~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 102 TIPPQLGYGARGAG---GVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EECGGGTTTTTCBT---TTBCTTCCEEEEEEEEEC
T ss_pred EECcHHhCCCCCCC---CCCCCCCeEEEEEEEEEC
Confidence 99999999988754 369999999999999864
No 54
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.75 E-value=9.4e-19 Score=156.07 Aligned_cols=132 Identities=22% Similarity=0.332 Sum_probs=98.8
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCCC
Q 008400 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (567)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (567)
.++.||.|.|||++++.||++|++++..++|+.|.+|.+++||||++||.+|++|++++|.|||++|||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~-------- 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS-------- 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC--------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC--------
Confidence 578999999999999999999999987668999999999999999999999999999999999999999877
Q ss_pred CcEEEEEEEEEEeeccccccccceeeeeeeccc---cccCCCCCCeEEEEEEEEeCCCeEeeec
Q 008400 132 ATLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKA 192 (567)
Q Consensus 132 ~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (567)
..++..+....|...... ..+..+..-...|. +....-.++.|++++||+|++.++.++-
T Consensus 96 ~~lv~~vp~~~f~~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~v 158 (169)
T 4dt4_A 96 PDLIQYFSRREFMDAGEP-EIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDI 158 (169)
T ss_dssp GGGEEEEEGGGGTTTCCC-CTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTTCCEEEEE
T ss_pred hHHEEEeCHHHCCCcCCC-CCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCCCEEEEEE
Confidence 456666655544321111 11111111111111 1122234589999999999999887654
No 55
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.75 E-value=1.3e-17 Score=143.79 Aligned_cols=105 Identities=36% Similarity=0.609 Sum_probs=94.0
Q ss_pred eeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEEEEcCC
Q 008400 272 VIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPE 351 (567)
Q Consensus 272 v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~i~~~ 351 (567)
+.|+++++|.|..+|..|+.|+|||.+++.||++|+++. .++.|++|.+|.+.+++||+.+|..|++||++.|.|++.
T Consensus 26 ~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~--~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~ip~~ 103 (130)
T 2lgo_A 26 LEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSR--SRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTIPYQ 103 (130)
T ss_dssp CCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTT--TTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEEECTT
T ss_pred EEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccC--cCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECcH
Confidence 345699999997559999999999999999999998764 245899999999999999999999999999999999999
Q ss_pred CccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 352 YAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 352 ~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
++||+.+.. ..|||+++++|+|+|+++
T Consensus 104 ~aYG~~~~~---~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 104 LAYGERGYP---PVIPPKATLVFEVELLAV 130 (130)
T ss_dssp TSTTTTCCS---TTSCSSCCEEEEEEEEEC
T ss_pred HHCCCCCCC---CCcCCCCeEEEEEEEEEC
Confidence 999988754 359999999999999864
No 56
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.75 E-value=5e-18 Score=149.89 Aligned_cols=131 Identities=18% Similarity=0.249 Sum_probs=99.5
Q ss_pred CCCCCCCEEEEEEEEEEc-CCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCC
Q 008400 51 DTPENGDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIP 129 (567)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~-~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip 129 (567)
..++.||.|++||++++. ||++|++++.. .|+.|.+|.++++|||++||.||++|++++|.|||++|||+++
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~------ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE------ 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC------
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC------
Confidence 567899999999999988 99999999864 7999999999999999999999999999999999999999876
Q ss_pred CCCcEEEEEEEEEEeeccccccccceeeeeeeccc---cccCCCCCCeEEEEEEEEeCCCeEeeec
Q 008400 130 PNATLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKA 192 (567)
Q Consensus 130 ~~~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (567)
..+++.+....| ..... ..|..+..-...|. +...--.++.|+++|||+|++.++.++-
T Consensus 78 --~~~v~~v~~~~f-~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v 139 (151)
T 2kr7_A 78 --SSYLQEVPRDQF-EGIEL-EKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRF 139 (151)
T ss_dssp --SCEEEEEEGGGG-TTSCC-CTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEE
T ss_pred --cceEEEEcHHHc-CCCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEE
Confidence 467777776666 11111 11212111111111 1122335589999999999999887764
No 57
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.75 E-value=1.5e-17 Score=170.91 Aligned_cols=155 Identities=35% Similarity=0.599 Sum_probs=135.5
Q ss_pred ChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccC-CCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHH
Q 008400 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK 469 (567)
Q Consensus 391 ~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~-~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~ 469 (567)
+.++.+..+..++..|+.+++.|+|++|+..|++|+++.+... ....++..........+|+|+|.||+++++|++|+.
T Consensus 215 ~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 215 DVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 5788899999999999999999999999999999999765431 111233334566778899999999999999999999
Q ss_pred HHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 470 LCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 470 ~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
+|++||+++|+++++|+++|.+|..+++|++|+.+|++|++++|++..++..+..+...+++.+++++++|++||+
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999984
No 58
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.74 E-value=1.1e-18 Score=163.40 Aligned_cols=168 Identities=24% Similarity=0.312 Sum_probs=114.0
Q ss_pred CCCCCEEEEEEEEEEcCCCEEeecCCC-------------CCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCccc
Q 008400 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (567)
Q Consensus 53 ~~~gd~V~v~Y~~~~~~g~~~~~t~~~-------------~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ay 119 (567)
++.||.|.|||++++ ||++|++|+.. +.|+.|.+|.+++||||++||.||++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEEEEEEEeeccccc-cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeeccceEEE
Q 008400 120 GESGSPPTIPPNATLQFDVELLSWTSVKDIC-KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKADGVEFT 198 (567)
Q Consensus 120 g~~~~~~~ip~~~~l~~~vel~~~~~~~~~~-~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~ 198 (567)
|+++ ..++..+....+... ++. ..|..+. + ....+...--.++.|++++||+|++.++.++-+-....
T Consensus 81 Ge~~--------~~lv~~vp~~~f~~~-~~~~~vG~~~~-~-~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~ 149 (231)
T 3prb_A 81 GKRD--------PSKIKLIPLSEFTKR-GIKPIKGLTIT-I-DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVV 149 (231)
T ss_dssp CCCC--------GGGEEEEETHHHHTT-TCCCCTTCEEE-E-TTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEC
T ss_pred CCCC--------hHHEEecCHHHCCcc-cCCCCCCcEEE-e-cCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEe
Confidence 9987 345555544333211 111 1111111 0 00012223334589999999999999987765433332
Q ss_pred ecCCCCcchHHHHHhh----cc---CCcEEEEEecCCCccC
Q 008400 199 VKDGHFCPTLAKAVKT----MK---KGEKVLLAVKPQYGFG 232 (567)
Q Consensus 199 ~g~~~~~~gl~~~l~~----m~---~Ge~~~i~ip~~~~~g 232 (567)
-...+-+.++-.-..+ |+ .++++.|.+|++..|-
T Consensus 150 eat~eei~~~~~~~~~~~~~~~~~~~~~~~~i~~p~~~~~~ 190 (231)
T 3prb_A 150 DDKKNIVKEIVKMYVPRLSDVKVTIRNGTVKIELPEFAPFI 190 (231)
T ss_dssp CSHHHHHHHHHHHHCTTCCCCEEEEETTEEEEECCTTGGGS
T ss_pred cCCHHHHHHHHHHhcCCccceEEEEeCCeEEEEcCHHHhhh
Confidence 2222222222222221 22 4678899999987653
No 59
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.74 E-value=1.3e-18 Score=153.75 Aligned_cols=129 Identities=27% Similarity=0.388 Sum_probs=96.6
Q ss_pred CCCCCEEEEEEEEEEcCCCEEeecCCC-------------CCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCccc
Q 008400 53 PENGDEVEVHYTGTLLDGTQFDSSRDR-------------STPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAY 119 (567)
Q Consensus 53 ~~~gd~V~v~Y~~~~~~g~~~~~t~~~-------------~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ay 119 (567)
++.||.|+|||++++ ||++|++|+.. +.|+.|.+|.+++||||++||.+|++|++++|.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 678999999999999 99999999752 3799999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEEEEEEEEeeccccc-cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeecc
Q 008400 120 GESGSPPTIPPNATLQFDVELLSWTSVKDIC-KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKAD 193 (567)
Q Consensus 120 g~~~~~~~ip~~~~l~~~vel~~~~~~~~~~-~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~~ 193 (567)
|+++ ..++..+....+... ++. ..+..+. + ....+....-.++.|+++|||+|++.++.++-+
T Consensus 81 G~~~--------~~~V~~v~~~~f~~~-~~~~~~G~~~~-~-~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~v~ 144 (157)
T 3pr9_A 81 GKRD--------PSKIKLIPLSEFTKR-GIKPIKGLTIT-I-DGIPGKIVSINSGRVLVDFNHELAGKEVKYRIK 144 (157)
T ss_dssp CCCC--------GGGEEEEEHHHHHHT-TCCCCTTCEEE-E-TTEEEEEEEEETTEEEEECSCTTTTCCEEEEEE
T ss_pred CCCC--------hHhEEEcCHHHCCcc-cCCcCCCcEEE-e-cCCCeEEEEEcCCEEEEECCCccCCCeEEEEEE
Confidence 9987 455555555444321 111 1121111 1 000122333356899999999999999877653
No 60
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.73 E-value=2.7e-17 Score=152.77 Aligned_cols=104 Identities=26% Similarity=0.484 Sum_probs=95.6
Q ss_pred cCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEEE
Q 008400 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (567)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~ 347 (567)
-+.++.++++++|+| ..|..++.|+|||.+++.||++|+++ +.|++|.+| .+|+||+.+|..|++||++.|.
T Consensus 115 ~~sGl~y~vl~~G~G-~~p~~gd~V~V~Y~g~l~dG~vfDss-----~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~ 186 (219)
T 3oe2_A 115 LADGILMTELTPGTG-PKPDANGRVEVRYVGRLPDGKIFDQS-----TQPQWFRLD--SVISGWTSALQNMPTGAKWRLV 186 (219)
T ss_dssp CGGGCEEEEEECCCS-CCCCTTSEEEEEEEEECTTSCEEEEC-----SSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCeEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEeecc-----CCcEEEEec--chhHHHHHHHhCCCCCCEEEEE
Confidence 466799999999999 58999999999999999999999986 578999998 7999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCccEEEEEEEEEee
Q 008400 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 382 (567)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~ 382 (567)
|||.++||+.+... .|||+++|+|+|+|+++.
T Consensus 187 IPp~lAYG~~g~~~---~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 187 IPSDQAYGAEGAGD---LIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp ECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEEE
T ss_pred ECchhcCCCCCCCC---CCCCCCeEEEEEEEEEEe
Confidence 99999999987643 599999999999999875
No 61
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.73 E-value=4.4e-17 Score=151.96 Aligned_cols=122 Identities=30% Similarity=0.453 Sum_probs=104.6
Q ss_pred EEEeecccceeeeecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHH
Q 008400 254 ALELVSWKTVSEITDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDR 333 (567)
Q Consensus 254 ~v~l~~~~~~~d~~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~ 333 (567)
++-+....-....+.+.++.++++++|.|. .|..|+.|+|||++++.||++|+++. .++.|++|.+|.+.+++||+.
T Consensus 88 ~~~~eq~Gg~t~~~~~sGl~~~vl~~G~G~-~~~~gd~V~v~Y~g~l~dG~~fdss~--~~~~P~~f~lG~g~vi~G~ee 164 (209)
T 3uf8_A 88 EAHREQIGGSTVVTTESGLKYEDLTEGSGA-EARAGQTVSVHYTGWLTDGQKFDSSK--DRNDPFAFVLGGGMVIKGWDE 164 (209)
T ss_dssp EEECSCTTCCCCEECTTSCEEEEEECCCSC-BCCTTCEEEEEEEEEETTSCEEEESG--GGTCCEEEETTSSSSCHHHHH
T ss_pred hhhccccccccccCCCCceEEEEEEcCCCC-cCCCCCEEEEEEEEEECCCCEEEEcc--ccCCCEEEEeCCCccchhHHH
Confidence 333433332234456788999999999994 69999999999999999999999875 357899999999999999999
Q ss_pred HHhccCCCcEEEEEEcCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 334 AVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 334 ~l~~M~~GE~~~v~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
+|..|++||++.|.+||.++||+.+..+ .|||+++|+|+|+|+++
T Consensus 165 aL~gM~~Ge~~~v~Ipp~~aYG~~g~~~---~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 165 GVQGMKVGGVRRLTIPPQLGYGARGAAG---VIPPNATLVFEVELLDV 209 (209)
T ss_dssp HHTTCBTTCEEEEEECGGGTTTTTCBTT---TBCTTCCEEEEEEEEEC
T ss_pred HHhCCCCCCEEEEEECcHHhCCCCCCCC---CcCCCCeEEEEEEEEEC
Confidence 9999999999999999999999987653 59999999999999864
No 62
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.72 E-value=8.9e-19 Score=154.72 Aligned_cols=131 Identities=23% Similarity=0.384 Sum_probs=95.8
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEeecCC-------------CCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcc
Q 008400 52 TPENGDEVEVHYTGTLLDGTQFDSSRD-------------RSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELA 118 (567)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~~g~~~~~t~~-------------~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~a 118 (567)
+++.||.|.+||++++.||++|++|+. ...|+.|.+|.++++|||++||.||++|++++|.|||++|
T Consensus 1 ~i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~a 80 (151)
T 1ix5_A 1 MVDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKA 80 (151)
T ss_dssp CCCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTS
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHH
Confidence 367899999999999889999999963 2379999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCcEEEEEEEEEEeeccccccccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeec
Q 008400 119 YGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (567)
Q Consensus 119 yg~~~~~~~ip~~~~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (567)
||+++ ..+++.+.+..|.........+..+. + ..-.+......++.|+++|||++++.++.++-
T Consensus 81 YG~~~--------~~~v~~v~~~~f~~~~~~~~~G~~~~-~-~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v 144 (151)
T 1ix5_A 81 YGNRN--------EMLIQKIPRDAFKEADFEPEEGMVIL-A-EGIPATITEVTDNEVTLDFNHELAGKDLVFTI 144 (151)
T ss_dssp SCSCC--------STTBCCEETHHHHTSTTCCCTTEEEE-S-SSCEEEEEEEETTEEEEECCCSSTTCCEEEEC
T ss_pred CCCCC--------ccEEEEEEHHHcCccCCcccccCEEE-E-CCeEEEEEEEcCCEEEEeCCCCCCCCeEEEEE
Confidence 99876 45566666655532000011111110 0 00011122224589999999999999987654
No 63
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.72 E-value=1.4e-17 Score=143.66 Aligned_cols=109 Identities=19% Similarity=0.345 Sum_probs=96.2
Q ss_pred cccceeeeeeeccccccCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEecCCCCcchHHHHHhh------ccCCcE
Q 008400 151 KDGGIIKKILKEGEKWENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKT------MKKGEK 220 (567)
Q Consensus 151 ~d~~~~~~i~~~g~g~~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~------m~~Ge~ 220 (567)
.+.++.++++..|.| ..+..||.|++||++++.+|++|+++ +|+.|.+|.+++++||+++|.+ |++|++
T Consensus 10 ~~~Gl~~~~l~~G~G-~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge~ 88 (129)
T 1u79_A 10 SPSGLAFCDKVVGYG-PEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGK 88 (129)
T ss_dssp CTTSCEEEEEECCSS-CBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTCE
T ss_pred CCCCeEEEEEEcCCC-CCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCCE
Confidence 456788999999998 67999999999999999999999986 6899999999999999999998 999999
Q ss_pred EEEEecCCCccCCCCCCCCCCCCCCCCCCeEEEEEEeecc
Q 008400 221 VLLAVKPQYGFGEKGKSASGNEGAVPPNATLQIALELVSW 260 (567)
Q Consensus 221 ~~i~ip~~~~~g~~~~~~~~~~~~ip~~~~l~~~v~l~~~ 260 (567)
+++.|||+++||+.+.+..+....|||+++|+|+|+|+++
T Consensus 89 ~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 89 RTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp EEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred EEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9999999999998775211112469999999999999875
No 64
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.71 E-value=1.3e-17 Score=152.53 Aligned_cols=130 Identities=18% Similarity=0.213 Sum_probs=97.1
Q ss_pred CCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCCCC
Q 008400 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (567)
Q Consensus 53 ~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~ 132 (567)
++.||.|+|+|++++.||++|++++.. +|+.|.+|.+++||||+++|.+|++|++++|.|||++|||+++ .
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~--------~ 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD--------E 73 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC--------T
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC--------h
Confidence 678999999999998899999999864 8999999999999999999999999999999999999999876 3
Q ss_pred cEEEEEEEEEEeeccccccccceeeeeeecc--ccccCCCCCCeEEEEEEEEeCCCeEeeec
Q 008400 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEG--EKWENPKDLDEVLVNYEARLEDGMVVGKA 192 (567)
Q Consensus 133 ~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g--~g~~~~~~~d~V~v~y~~~~~~g~~~~~~ 192 (567)
.+++.|....|.....+ ..+..+......| .+..+...++.|+++||++|++.++.++-
T Consensus 74 ~lV~~vp~~~f~~~~~~-~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~v 134 (196)
T 2kfw_A 74 NLVQRVPKDVFMGVDEL-QVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNV 134 (196)
T ss_dssp TTCEEECGGGCCCSSCC-CTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEEE
T ss_pred hhEEEEEHHHCCCccCc-ccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEE
Confidence 45555555444321111 1122221111111 11234446789999999999999876654
No 65
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.70 E-value=4.9e-17 Score=145.95 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=97.1
Q ss_pred CCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCCCC
Q 008400 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (567)
Q Consensus 53 ~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~ 132 (567)
++.||.|+|+|++++.||++|++++.. +|+.|.+|.+++||||++||.||++|++++|.|||++|||+++ .
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~--------~ 73 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD--------E 73 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC--------T
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC--------h
Confidence 678999999999998899999999864 7999999999999999999999999999999999999999886 3
Q ss_pred cEEEEEEEEEEeeccccccccceeeeeeeccc--cccCCCCCCeEEEEEEEEeCCCeEeeeccceE
Q 008400 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEGE--KWENPKDLDEVLVNYEARLEDGMVVGKADGVE 196 (567)
Q Consensus 133 ~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~--g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~~ 196 (567)
.+++.|....|.....+ ..+..+..-...|. +....-.++.|+++||++|++.++.++-+-..
T Consensus 74 ~~v~~v~~~~f~~~~~~-~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~ 138 (171)
T 2k8i_A 74 NLVQRVPKDVFMGVDEL-QVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVA 138 (171)
T ss_dssp TSEEEEEGGGGTTSSCC-CTTCEEEEEETTEEEEEEEEEECSSEEEEESCCSSCCCEEEEEEEEEE
T ss_pred hhEEEeeHHHCCcccCc-cCCcEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEE
Confidence 45555555444211111 11111111000110 11122245899999999999999877654333
No 66
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.69 E-value=1.7e-16 Score=147.62 Aligned_cols=109 Identities=26% Similarity=0.430 Sum_probs=97.6
Q ss_pred ecCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEE
Q 008400 267 TDDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALL 346 (567)
Q Consensus 267 ~~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v 346 (567)
+.+.++.++++++|+| ..|..++.|+|||.+++.||++|+++.. ++.|++|.+ +.+|+||+.+|..|++||++.|
T Consensus 103 ~~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v 177 (213)
T 1fd9_A 103 VLPSGLQYKVINSGNG-VKPGKSDTVTVEYTGRLIDGTVFDSTEK--TGKPATFQV--SQVIPGWTEALQLMPAGSTWEI 177 (213)
T ss_dssp ECTTSCEEEEEECCCS-CCCCTTCEEEEEEEEEETTSCEEEEHHH--HCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEE
T ss_pred ECCCccEEEEEecCCC-ccCCCCCEEEEEEEEEECCCCEEeeccc--cCCCEEEEc--CchhhHHHHHHcCCCCCCEEEE
Confidence 3466799999999999 5899999999999999999999998752 468999999 4799999999999999999999
Q ss_pred EEcCCCccCCccccccccCCCCCccEEEEEEEEEeee
Q 008400 347 TIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFEK 383 (567)
Q Consensus 347 ~i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~~~ 383 (567)
.||+.++||+.+.. ..|||+++|+|+|+|+++.+
T Consensus 178 ~IP~~laYG~~g~~---~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 178 YVPSGLAYGPRSVG---GPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EECGGGTTTTCCCS---SSCCTTCCEEEEEEEEEEEC
T ss_pred EECchhccCccCCC---CCCCCCCeEEEEEEEEEEEc
Confidence 99999999998753 36999999999999999864
No 67
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.68 E-value=9.6e-17 Score=132.68 Aligned_cols=91 Identities=25% Similarity=0.445 Sum_probs=84.1
Q ss_pred cCCCCCCeEEEEEEEEeCCCeEeeec----cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCC
Q 008400 167 ENPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNE 242 (567)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~ 242 (567)
..+..||.|+++|++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||+++||+.+.+
T Consensus 4 ~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~----- 78 (102)
T 2pbc_A 4 IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAP----- 78 (102)
T ss_dssp CCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBT-----
T ss_pred CcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCC-----
Confidence 56889999999999999999999986 689999999999999999999999999999999999999988763
Q ss_pred CCCCCCCeEEEEEEeecccc
Q 008400 243 GAVPPNATLQIALELVSWKT 262 (567)
Q Consensus 243 ~~ip~~~~l~~~v~l~~~~~ 262 (567)
..|||+++|+|+|+|+++..
T Consensus 79 ~~Ip~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 79 PKIPGGATLVFEVELLKIER 98 (102)
T ss_dssp TTBCTTCCEEEEEEEEEEGG
T ss_pred CCcCcCCeEEEEEEEEEecc
Confidence 47999999999999998864
No 68
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.67 E-value=6.5e-16 Score=144.78 Aligned_cols=105 Identities=30% Similarity=0.536 Sum_probs=94.8
Q ss_pred cCcceeEEEEeCCCCCCCCCCCCEEEEEEEEEecCCcEEEeccCCCCcccEEEEcCccchhhHHHHHHhccCCCcEEEEE
Q 008400 268 DDKKVIKKILKEGDGFERPNEGAVVKVKLIGKLQDGTVFVKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLT 347 (567)
Q Consensus 268 ~d~~v~k~il~~G~g~~~p~~~~~v~v~y~~~l~~g~~~~~~~~~~~~~~~~~~lg~~~vi~gle~~l~~M~~GE~~~v~ 347 (567)
.+.++..+++++|.| ..|..++.|+|||.+++.||++|+++.. ++.|++|.+ +.+|+||+.+|..|++||++.|.
T Consensus 119 ~~sGl~y~vl~~G~G-~~p~~gD~V~V~Y~g~l~dG~vfdss~~--~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~ 193 (224)
T 1q6h_A 119 SSTGLVYQVVEAGKG-EAPKDSDTVVVNYKGTLIDGKEFDNSYT--RGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV 193 (224)
T ss_dssp CTTSCEEEEEECCSS-CCCCTTCEEEEEEEEEETTSCEEEEGGG--GTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE
T ss_pred CCCceEEEEEecccC-ccccCCCEEEEEEEEEeCCCCEEeeccc--cCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEE
Confidence 356799999999999 5899999999999999999999998753 468999999 47999999999999999999999
Q ss_pred EcCCCccCCccccccccCCCCCccEEEEEEEEEe
Q 008400 348 IAPEYAFGSAESQQELAVVPPNSTVHYEVELVSF 381 (567)
Q Consensus 348 i~~~~~yg~~~~~~~~~~ip~~~~l~f~ieL~~~ 381 (567)
||+.++||..+.. .|||+++++|+|+|+++
T Consensus 194 IP~~laYG~~g~~----~IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 194 IPPELAYGKAGVP----GIPPNSTLVFDVELLDV 223 (224)
T ss_dssp ECGGGTTTTTCBT----TBCTTCCEEEEEEEEEE
T ss_pred ECchhhcCcCCCC----CCCCCCEEEEEEEEEEe
Confidence 9999999988753 39999999999999876
No 69
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.66 E-value=3.3e-16 Score=135.22 Aligned_cols=115 Identities=24% Similarity=0.355 Sum_probs=100.7
Q ss_pred HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
..+.|..+++.|+.+|+.|+|++|+..|++|+++.|.+. .+|+|+|.||+++|+|++|+.+|+++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~---------------~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNI---------------TFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 456788999999999999999999999999999877543 35999999999999999999999999
Q ss_pred hccCCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 475 LDLDSRN-------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 475 l~~~p~~-------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
|+++|++ .++|+++|.++..+++|++|+.+|++++++.|+. +....+..+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~-~~~~~l~~l 125 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP-ELVKKVKEL 125 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH-HHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH-HHHHHHHHh
Confidence 9998876 4789999999999999999999999999999864 444444443
No 70
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.65 E-value=6.4e-16 Score=132.62 Aligned_cols=116 Identities=24% Similarity=0.318 Sum_probs=108.0
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..++..|+.+++.|+|++|+..|++++...+.+. .+++++|.||.++++|++|+.+|++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA---------------RGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 577899999999999999999999999999877543 45999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEID------PDNRDVKLEYKTLKEK 528 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~------P~n~~~~~~l~~~~~~ 528 (567)
+|+++.+++++|.+|..+|++++|+.+|+++++++ |++..+...+..+..+
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 9999998888887654
No 71
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.64 E-value=1.9e-16 Score=140.40 Aligned_cols=128 Identities=20% Similarity=0.259 Sum_probs=95.7
Q ss_pred CCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCCCC
Q 008400 53 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNA 132 (567)
Q Consensus 53 ~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~~ 132 (567)
++.||.|++||+++ .||++|++++ +.|.+|.++++|||++||.||++|++++|.|||++|||+++ .
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~--------~ 68 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD--------P 68 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC--------G
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC--------c
Confidence 67899999999999 8999999985 89999999999999999999999999999999999999876 5
Q ss_pred cEEEEEEEEEEeeccccccccceeeeeeeccc---cccCCCCCCeEEEEEEEEeCCCeEeeeccce
Q 008400 133 TLQFDVELLSWTSVKDICKDGGIIKKILKEGE---KWENPKDLDEVLVNYEARLEDGMVVGKADGV 195 (567)
Q Consensus 133 ~l~~~vel~~~~~~~~~~~d~~~~~~i~~~g~---g~~~~~~~d~V~v~y~~~~~~g~~~~~~~~~ 195 (567)
.+++.|.+..|...... ..+..+..-...|. +...-..++.|++++||++++.++.++-+-+
T Consensus 69 ~lv~~v~~~~f~~~~~~-~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAGk~L~F~vev~ 133 (158)
T 3cgm_A 69 EGVQVVPLSAFPEDAEV-VPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVV 133 (158)
T ss_dssp GGEEEEEGGGSCTTSCC-CTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEE
T ss_pred ceEEEEEHHHCCCCCCC-ccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccCCEEEEEEEEE
Confidence 67777777666421111 11111111111111 1122234589999999999999887765433
No 72
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.64 E-value=2.3e-16 Score=131.96 Aligned_cols=85 Identities=22% Similarity=0.438 Sum_probs=76.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCC
Q 008400 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (567)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (567)
..++.||.|.|+|++++ ||++|++++ ++|+.|.+|.+++||||+++|.||++|++++|.||++..||..+. +
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~Yg~~~~-----~ 99 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKEL-----Q 99 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTTSSSSGG-----G
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchhhCcCCC-----C
Confidence 57899999999999998 999999995 489999999999999999999999999999999984444998763 6
Q ss_pred CCcEEEEEEEEEE
Q 008400 131 NATLQFDVELLSW 143 (567)
Q Consensus 131 ~~~l~~~vel~~~ 143 (567)
+++++|+|+|+++
T Consensus 100 g~~l~F~V~l~~V 112 (113)
T 1hxv_A 100 SKPVTFEVVLKAI 112 (113)
T ss_dssp SCCCEEEEEECCB
T ss_pred CCEEEEEEEEEEE
Confidence 7999999999876
No 73
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.60 E-value=6.4e-15 Score=132.70 Aligned_cols=121 Identities=23% Similarity=0.222 Sum_probs=107.0
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|++++.+.+.+. .+++++|.||+++++|++|+.+|+++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al~ 73 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP---------------IYLSNRAAAYSASGQHEKAAEDAELATV 73 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4578899999999999999999999999999877543 3589999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD--VKLEYKTLKEKMKEY 532 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~--~~~~l~~~~~~~~~~ 532 (567)
++|+++.+|+++|.+|..+|++++|+.+|+++++++|++.. +...+..++.++.+.
T Consensus 74 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999976 445555555544443
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.59 E-value=8.7e-15 Score=130.20 Aligned_cols=105 Identities=12% Similarity=0.162 Sum_probs=98.4
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..+++.|+|++|+..|++++.+.|.+.. +|+++|.||.++|+|++|+..|+++++
T Consensus 34 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~---------------~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 34 DMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVD---------------YIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---------------HHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 45678899999999999999999999999999886553 389999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
++|+++.+|+++|.||..+|++++|+.+|++|+++.|++.
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999874
No 75
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.56 E-value=2.4e-14 Score=125.77 Aligned_cols=122 Identities=20% Similarity=0.211 Sum_probs=108.0
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..+++.|+|++|+..|++++...|.+. .+++++|.||.++|+|++|+..|++++.
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA---------------RYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3456778999999999999999999999999877544 3488999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 533 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~ 533 (567)
++|+++.+++++|.+|..+|++++|+.+|+++++++|++........++...+...+
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVT 137 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998877666666666555444
No 76
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.56 E-value=2e-14 Score=127.53 Aligned_cols=119 Identities=15% Similarity=0.180 Sum_probs=104.9
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|.+|+..|++++...+.+. .+++++|.|+..+|+|++|+..|++++.
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS---------------RFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3466788899999999999999999999999877644 3388999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
++|+++.+++++|.+|..+|++++|+.+|+++++++|+++.......++...+.
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998766555555544443
No 77
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=2.8e-14 Score=126.78 Aligned_cols=115 Identities=13% Similarity=0.034 Sum_probs=91.2
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
+.+..+...|..+++.|+|++|+..|++++++.|.+. .+|+++|.||.++|++++|+.+++++++
T Consensus 29 ~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 29 QKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP---------------KAHRFLGLLYELEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 3455667788888888888888888888888876543 3478888888888888888888888888
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFD-IKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~-~~~al~l~P~n~~~~~~l~~~~ 526 (567)
++|+++.+++++|.+|..++++++|... +++|++++|+|..+...+.++.
T Consensus 94 ~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 94 LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLL 144 (150)
T ss_dssp HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence 8888888888888888888888776654 5888888888887766665553
No 78
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.53 E-value=3.1e-14 Score=123.44 Aligned_cols=120 Identities=29% Similarity=0.391 Sum_probs=108.1
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|.+++...+.+. .+++++|.|+..+++|++|+.+++++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA---------------VYYTNRALCYLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999876533 358999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHHHHHH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD-----NRDVKLEYKTLKEKMKEYN 533 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~-----n~~~~~~l~~~~~~~~~~~ 533 (567)
|+++.+++++|.+|..+|++++|+..|+++++++|+ +..+...+..+..+.....
T Consensus 74 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 133 (137)
T 3q49_B 74 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSI 133 (137)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 7788888887766554443
No 79
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.52 E-value=2.6e-14 Score=126.96 Aligned_cols=127 Identities=15% Similarity=0.107 Sum_probs=106.1
Q ss_pred hhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHH
Q 008400 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKA 484 (567)
Q Consensus 405 ~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka 484 (567)
.|..+..+|++++|+..|.+++...+..... ++++|.+|+++|+|++|+.+++++++++|+++.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~---------------~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSIK---------------GFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHTT---------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHHH---------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 5777888999999999999999876654433 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 485 LYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 485 ~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
|+++|.+|..+|++++|+.+|+++++++|++..+...+..+....++..++....+++....
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l 129 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL 129 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998888888766655544333344555543
No 80
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.49 E-value=1e-12 Score=117.36 Aligned_cols=124 Identities=25% Similarity=0.399 Sum_probs=111.7
Q ss_pred hHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHH
Q 008400 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLC 471 (567)
Q Consensus 392 ~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~ 471 (567)
.......+..+...|..++..|+|.+|+..|.+++...+.+ ..+++++|.|+..+++|++|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---------------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35677889999999999999999999999999999986643 235889999999999999999999
Q ss_pred HHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 472 TKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 472 ~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
.+++.++|.++.+++++|.++..+|++++|+.+|+++++++|++..+...+..+.....
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 129 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK 129 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888877777644443
No 81
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=4.4e-13 Score=125.85 Aligned_cols=131 Identities=14% Similarity=0.076 Sum_probs=105.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChH-HHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDE-EKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e-~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
+..+..+|..++..|+|++|+..|++++...|.+...... ...........+++++|.+|.++|++++|+..|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999987653211000 000001122233445999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
+|+++.+++++|.+|..+|++++|+.+|+++++++|++..+...++.+....
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~ 135 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLT 135 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888888765433
No 82
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.46 E-value=4.4e-13 Score=111.97 Aligned_cols=114 Identities=23% Similarity=0.265 Sum_probs=104.4
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|++++...+.+. .++.++|.|+..++++++|+..+++++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH---------------VLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH---------------HHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 467788999999999999999999999998866432 35889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
+|++..+++++|.++..+|++++|+..|+++++++|++..+...+..+.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999988887777664
No 83
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.45 E-value=2.2e-13 Score=113.88 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=72.5
Q ss_pred cCCCCCCeEEEEEEEEeCCCeEeeec--cceEEEecCCCCcchHHHHHhhccCCcEEEEEec-CCCccCCCCCCCCCCCC
Q 008400 167 ENPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVK-PQYGFGEKGKSASGNEG 243 (567)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip-~~~~~g~~~~~~~~~~~ 243 (567)
..+..||.|+++|++++ +|++|+++ +|+.|.+|.++++|||+++|.+|++|+++.|.|| |+. ||..+.
T Consensus 28 ~~~~~gD~V~v~Y~g~~-dG~~fdss~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~------- 98 (113)
T 1hxv_A 28 KKLANGDIAIIDFTGIV-DNKKLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL------- 98 (113)
T ss_dssp -CCCSSEEEEEEEEEEE-TTEECSTTCCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG-------
T ss_pred CCCCCCCEEEEEEEEEE-CCEEcccCCccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC-------
Confidence 36788999999999999 99999987 7999999999999999999999999999999996 553 886543
Q ss_pred CCCCCCeEEEEEEeecc
Q 008400 244 AVPPNATLQIALELVSW 260 (567)
Q Consensus 244 ~ip~~~~l~~~v~l~~~ 260 (567)
++++++|+|+|+++
T Consensus 99 ---~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 ---QSKPVTFEVVLKAI 112 (113)
T ss_dssp ---GSCCCEEEEEECCB
T ss_pred ---CCCEEEEEEEEEEE
Confidence 57899999999875
No 84
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.45 E-value=4.9e-13 Score=148.44 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=86.9
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------------ChHHHH------HHHHHHHHHHhhHHHH
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKK------QAKALKVACNLNNAAC 457 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~------~~~~~~~~~~~nla~~ 457 (567)
+.+..+.+.|+.+.+.|+|++|+..|++|+++.+..... .++... +.......+|+|+|.+
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 457778888888888888888888888888876653211 000000 0111123456666666
Q ss_pred HHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 008400 458 KLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN 533 (567)
Q Consensus 458 ~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~ 533 (567)
|.++|++++|+.+|++|++++|++..+|+++|.+|..+|++++|+.+|++|++++|++..+...+..+...+.+..
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH
Confidence 6666666666666666666666666666666666666666666666666666666666666666666655554444
No 85
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.44 E-value=1e-12 Score=112.35 Aligned_cols=118 Identities=11% Similarity=0.085 Sum_probs=103.3
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|.+++...+.+.. ...+++++|.|+.++|+|++|+..+++++..+
T Consensus 2 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~------------~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~ 69 (129)
T 2xev_A 2 ARTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY------------TPNALYWLGESYYATRNFQLAEAQFRDLVSRY 69 (129)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC
Confidence 345678899999999999999999999998775431 22458899999999999999999999999999
Q ss_pred CCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 479 SRN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 479 p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
|++ +.+++++|.+|..+|++++|+..|+++++..|++..+...+..+...
T Consensus 70 p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 70 PTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 999 89999999999999999999999999999999998777666665443
No 86
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.43 E-value=1.6e-12 Score=110.59 Aligned_cols=122 Identities=30% Similarity=0.320 Sum_probs=108.7
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHH
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~ 472 (567)
+.....+..+...|..++..|+|++|+..|.+++...+.. ..++.++|.++..++++++|+..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN---------------AVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhhchHHHHHHHH
Confidence 3445678889999999999999999999999999886543 2348899999999999999999999
Q ss_pred HHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 473 KVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 473 ~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
+++..+|++..+++++|.++..+|++++|+..|+++++++|++..+...+..+...+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 127 (131)
T 2vyi_A 71 RAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKL 127 (131)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988887777765544
No 87
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=8.3e-13 Score=115.49 Aligned_cols=117 Identities=32% Similarity=0.557 Sum_probs=105.3
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|.+|+..|++++...+.. .....+++++|.||.++++|++|+..|++++.+
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP------------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH------------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc------------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 35678899999999999999999999999876531 224567899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
+|+++.+++++|.+|..++++++|+.+|+++++++|++..+...+..+.
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988887777664
No 88
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.42 E-value=3.5e-13 Score=114.97 Aligned_cols=102 Identities=13% Similarity=0.051 Sum_probs=89.7
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (567)
..+...|..+++.|+|++|+..|++++...|.+.. +++++|.|+..+|++++|+..++++++++|
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~---------------a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 82 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREE---------------AWRSLGLTQAENEKDGLAIIALNHARMLDP 82 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH---------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH---------------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34678899999999999999999999998876543 488999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
+++.+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 83 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 83 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 9999999999999999999999999999999999874
No 89
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.41 E-value=8.6e-13 Score=112.98 Aligned_cols=115 Identities=30% Similarity=0.389 Sum_probs=104.2
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|++++...+.+ ..+++++|.++..++++++|+..+++++..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD---------------AKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC---------------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 36778899999999999999999999999876543 245889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
+|.+..+++++|.++..+|++++|+..|+++++++|.+..+...+..+..
T Consensus 80 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 80 EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887777776644
No 90
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.40 E-value=1.7e-12 Score=110.59 Aligned_cols=118 Identities=27% Similarity=0.352 Sum_probs=105.2
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|.+++...+.+ ..+++++|.++..+++|++|+.++++++.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN---------------MTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc---------------HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 46778899999999999999999999999886543 245889999999999999999999999999
Q ss_pred CCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 008400 478 DSRN-------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 531 (567)
Q Consensus 478 ~p~~-------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~ 531 (567)
.|.+ ..+++++|.+|..+|++++|+.+|++++++.| +..+...+..+...+++
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 8877 99999999999999999999999999999999 67788888777666554
No 91
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.39 E-value=7e-12 Score=111.66 Aligned_cols=81 Identities=20% Similarity=0.356 Sum_probs=73.8
Q ss_pred CCCCCCeEEEEEEEEeCCCeEeeec----cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCC
Q 008400 168 NPKDLDEVLVNYEARLEDGMVVGKA----DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEG 243 (567)
Q Consensus 168 ~~~~~d~V~v~y~~~~~~g~~~~~~----~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~ 243 (567)
.++.|+.|+++|++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|++++|.|||++|||+.
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~--------- 94 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVP--------- 94 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCC---------
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCC---------
Confidence 4678999999999999999999987 799999999999999999999999999999999999999964
Q ss_pred CCCCCCeEEEEEEeeccc
Q 008400 244 AVPPNATLQIALELVSWK 261 (567)
Q Consensus 244 ~ip~~~~l~~~v~l~~~~ 261 (567)
+..+++.|....|.
T Consensus 95 ----~~~lv~~vp~~~f~ 108 (169)
T 4dt4_A 95 ----SPDLIQYFSRREFM 108 (169)
T ss_dssp ----CGGGEEEEEGGGGT
T ss_pred ----ChHHEEEeCHHHCC
Confidence 45678888888875
No 92
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.39 E-value=1.2e-12 Score=115.34 Aligned_cols=81 Identities=19% Similarity=0.301 Sum_probs=73.6
Q ss_pred cCCCCCCeEEEEEEEEeC-CCeEeeec---cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCC
Q 008400 167 ENPKDLDEVLVNYEARLE-DGMVVGKA---DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNE 242 (567)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~-~g~~~~~~---~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~ 242 (567)
..++.|+.|+++|++++. +|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||+.+||+.
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~-------- 76 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVY-------- 76 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSS--------
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCC--------
Confidence 456789999999999998 99999987 699999999999999999999999999999999999999964
Q ss_pred CCCCCCCeEEEEEEeecc
Q 008400 243 GAVPPNATLQIALELVSW 260 (567)
Q Consensus 243 ~~ip~~~~l~~~v~l~~~ 260 (567)
+..+++.+.+..|
T Consensus 77 -----~~~~v~~v~~~~f 89 (151)
T 2kr7_A 77 -----ESSYLQEVPRDQF 89 (151)
T ss_dssp -----CSCEEEEEEGGGG
T ss_pred -----CcceEEEEcHHHc
Confidence 3458888888888
No 93
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.38 E-value=1.3e-12 Score=123.46 Aligned_cols=94 Identities=17% Similarity=0.227 Sum_probs=59.9
Q ss_pred HHhhHHHHHHhc-----------cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008400 450 CNLNNAACKLKL-----------KDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (567)
Q Consensus 450 ~~~nla~~~~k~-----------~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~ 518 (567)
+++++|.++.++ |++++|+..++++++++|+++.+++++|.+|..+|++++|+..|++|++++ ++..+
T Consensus 75 a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~ 153 (217)
T 2pl2_A 75 GYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEI 153 (217)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHH
T ss_pred HHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHH
Confidence 366666666666 666667766666666666666666666766666777777777777766666 66666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 519 KLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 519 ~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
...+..+....++..+. ...|++...
T Consensus 154 ~~~la~~~~~~g~~~~A-~~~~~~al~ 179 (217)
T 2pl2_A 154 RSALAELYLSMGRLDEA-LAQYAKALE 179 (217)
T ss_dssp HHHHHHHHHHHTCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHH-HHHHHHHHH
Confidence 66666665555544433 334555444
No 94
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.38 E-value=1.4e-12 Score=144.71 Aligned_cols=116 Identities=16% Similarity=0.099 Sum_probs=86.0
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------------ChHHHH------HHHHHHHHHHhhHHHHHHh
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKK------QAKALKVACNLNNAACKLK 460 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~------~~~~~~~~~~~nla~~~~k 460 (567)
..+.+.|+.+++.|+|++|+..|++|+++.+..... .++... +.+.....+|+|+|.+|.+
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~ 123 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKD 123 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 445556666666666666666666666654432210 000000 1111234579999999999
Q ss_pred ccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 461 LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 461 ~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
+|++++|+.+|++||+++|+++.+++++|.+|..++++++|++.|++++++.|+.
T Consensus 124 ~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 124 SGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQ 178 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhH
Confidence 9999999999999999999999999999999999999999999999999987665
No 95
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.37 E-value=3.7e-12 Score=120.78 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=96.2
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh-ccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIE-YDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~-~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
..+...|..++..|+|++|+..|++++...+ .+. .+++++|.|+.++++|++|+.+++++++++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS---------------VTAYNCGVCADNIKKYKEAADYFDIAIKKN 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc---------------HHHHHHHHHHHHhhcHHHHHHHHHHHHHhC
Confidence 5688999999999999999999999999876 322 347789999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~ 518 (567)
|++..+++++|.+|..+|++++|+..|+++++++|++...
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 112 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATI 112 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHH
Confidence 9999999999999999999999999999999999999844
No 96
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.37 E-value=7.9e-12 Score=110.28 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=69.8
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec-----------------cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCcc
Q 008400 169 PKDLDEVLVNYEARLEDGMVVGKA-----------------DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGF 231 (567)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~-----------------~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~ 231 (567)
.+.||.|+++|++++ +|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~aY 80 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHHhc
Confidence 467899999999999 99999986 489999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEeeccc
Q 008400 232 GEKGKSASGNEGAVPPNATLQIALELVSWK 261 (567)
Q Consensus 232 g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (567)
|+.+. .++..+....|.
T Consensus 81 G~~~~-------------~~V~~v~~~~f~ 97 (157)
T 3pr9_A 81 GKRDP-------------SKIKLIPLSEFT 97 (157)
T ss_dssp CCCCG-------------GGEEEEEHHHHH
T ss_pred CCCCh-------------HhEEEcCHHHCC
Confidence 96543 467777776663
No 97
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.37 E-value=7.7e-13 Score=116.62 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=91.0
Q ss_pred HHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCH----------HHHHHHHHHHhccC
Q 008400 409 LFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDY----------KQAEKLCTKVLDLD 478 (567)
Q Consensus 409 ~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~----------~~Ai~~~~~al~~~ 478 (567)
.-+.+.|++|+..|++|+.+.|.+.. +++|+|.|+..++++ ++|+..|++||+++
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~ae---------------a~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDAD---------------NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHH---------------HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC
Confidence 34567899999999999999887554 389999999999875 59999999999999
Q ss_pred CCCHHHHHHHHHHHHhcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 479 SRNVKALYRRAQAYIQMA-----------DLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~-----------~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
|++..+|+++|.+|..+| +|++|+.+|++|++++|++...+..+..+.+
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~k 136 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAK 136 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHh
Confidence 999999999999999885 8999999999999999999877666665533
No 98
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.36 E-value=2.6e-12 Score=126.66 Aligned_cols=102 Identities=31% Similarity=0.446 Sum_probs=95.6
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..++..|+.+++.|+|++|+..|++|+...+.+. .+++|+|.||.++|+|++|+.+|+++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA---------------VYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999877543 348999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
|++.++++++|.+|..+|++++|+..|+++++++|++
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999976
No 99
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.36 E-value=2e-11 Score=109.39 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=71.8
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec---cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCC
Q 008400 169 PKDLDEVLVNYEARLEDGMVVGKA---DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAV 245 (567)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~---~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~i 245 (567)
++.||.|+++|++++.+|++|+++ +|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~---------- 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD---------- 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC----------
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC----------
Confidence 567899999999999999999987 6999999999999999999999999999999999999999653
Q ss_pred CCCCeEEEEEEeeccc
Q 008400 246 PPNATLQIALELVSWK 261 (567)
Q Consensus 246 p~~~~l~~~v~l~~~~ 261 (567)
..+++.|.+..|.
T Consensus 73 ---~~~v~~v~~~~f~ 85 (171)
T 2k8i_A 73 ---ENLVQRVPKDVFM 85 (171)
T ss_dssp ---TTSEEEEEGGGGT
T ss_pred ---hhhEEEeeHHHCC
Confidence 3467888887774
No 100
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.34 E-value=1.7e-12 Score=118.68 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=71.3
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec---cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCC
Q 008400 169 PKDLDEVLVNYEARLEDGMVVGKA---DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAV 245 (567)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~---~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~i 245 (567)
++.++.|+++|++++.+|++|+++ +|+.|.+|.++++|||+++|.+|++|++++|.|||+.+||+.+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~---------- 72 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD---------- 72 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC----------
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC----------
Confidence 567899999999999999999987 6999999999999999999999999999999999999999643
Q ss_pred CCCCeEEEEEEeeccc
Q 008400 246 PPNATLQIALELVSWK 261 (567)
Q Consensus 246 p~~~~l~~~v~l~~~~ 261 (567)
..+++.|.+..|.
T Consensus 73 ---~~lV~~vp~~~f~ 85 (196)
T 2kfw_A 73 ---ENLVQRVPKDVFM 85 (196)
T ss_dssp ---TTTCEEECGGGCC
T ss_pred ---hhhEEEEEHHHCC
Confidence 3467777777764
No 101
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.34 E-value=3.2e-12 Score=135.83 Aligned_cols=120 Identities=26% Similarity=0.407 Sum_probs=109.1
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
.+.+..+...|+.+++.|+|++|+..|++|++..+.. ..+++|+|.||.++++|++|+.++++|+
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN---------------AIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3568889999999999999999999999999986654 3458999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 476 DLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 476 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
+++|+++.+++++|.+|..+|++++|++.|++|++++|++..+...+..+....+
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~ 122 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVK 122 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888888887744443
No 102
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.32 E-value=2.7e-11 Score=113.30 Aligned_cols=79 Identities=20% Similarity=0.370 Sum_probs=69.5
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec-----------------cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCcc
Q 008400 169 PKDLDEVLVNYEARLEDGMVVGKA-----------------DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGF 231 (567)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~-----------------~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~ 231 (567)
.+.||.|++||++++ +|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||++||
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~AY 80 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEKAF 80 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGGTT
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHHhc
Confidence 467899999999999 99999986 389999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEeeccc
Q 008400 232 GEKGKSASGNEGAVPPNATLQIALELVSWK 261 (567)
Q Consensus 232 g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (567)
|+.+. .++..+....|.
T Consensus 81 Ge~~~-------------~lv~~vp~~~f~ 97 (231)
T 3prb_A 81 GKRDP-------------SKIKLIPLSEFT 97 (231)
T ss_dssp CCCCG-------------GGEEEEETHHHH
T ss_pred CCCCh-------------HHEEecCHHHCC
Confidence 96543 466777766663
No 103
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.32 E-value=4.7e-12 Score=130.29 Aligned_cols=131 Identities=15% Similarity=0.034 Sum_probs=77.0
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC--------------ChHHHHHHH------HHHHHHHhhHHHH
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF--------------GDEEKKQAK------ALKVACNLNNAAC 457 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~--------------~~e~~~~~~------~~~~~~~~nla~~ 457 (567)
.+..+...|..+++.|+|++|+..|++||.+.|.+... .++.....+ .-...+|+++|.+
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~ 175 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVL 175 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 34455566666666666666666666666665543211 000000000 0012346666666
Q ss_pred HHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 458 KLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 458 ~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
+.++|++++|+.+|+++|+++|++..+|+++|.++..+|++++|+.+|+++++++|+|..++..+..+...
T Consensus 176 ~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 176 VEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 66666666666666666666666666666666666666666666666666666666666666666655444
No 104
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.32 E-value=4.2e-12 Score=111.84 Aligned_cols=80 Identities=21% Similarity=0.388 Sum_probs=71.0
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeec-----------------cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCcc
Q 008400 169 PKDLDEVLVNYEARLEDGMVVGKA-----------------DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGF 231 (567)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~-----------------~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~ 231 (567)
++.||.|+++|++++.+|++|+++ +|+.|.+|.+++++||+++|.+|++|+++++.|||+.||
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~aY 81 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEKAY 81 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTTSS
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHHHC
Confidence 567899999999999999999986 488999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCeEEEEEEeeccc
Q 008400 232 GEKGKSASGNEGAVPPNATLQIALELVSWK 261 (567)
Q Consensus 232 g~~~~~~~~~~~~ip~~~~l~~~v~l~~~~ 261 (567)
|+.+ ..+++.|.+..|.
T Consensus 82 G~~~-------------~~~v~~v~~~~f~ 98 (151)
T 1ix5_A 82 GNRN-------------EMLIQKIPRDAFK 98 (151)
T ss_dssp CSCC-------------STTBCCEETHHHH
T ss_pred CCCC-------------ccEEEEEEHHHcC
Confidence 9654 3467777777774
No 105
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.32 E-value=5.8e-12 Score=129.64 Aligned_cols=132 Identities=11% Similarity=-0.028 Sum_probs=101.9
Q ss_pred HhhhhhhhhHHHhcCc-HHHHHHHHHHHHHhhhccCCC-------------ChHHHHH------HHHHHHHHHhhHHHHH
Q 008400 399 AGKKKEQGNTLFKAGK-YARASKRYEKAVKYIEYDTSF-------------GDEEKKQ------AKALKVACNLNNAACK 458 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~-~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~------~~~~~~~~~~nla~~~ 458 (567)
+..+..+|..++..|+ |++|+..|++|+.+.+.+... .++.... ...-...+|+|+|.++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~ 210 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVI 210 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHH
Confidence 4556677777777775 788888887777776543210 0111111 1112345799999999
Q ss_pred HhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh-cCCHHHH-----HHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 459 LKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ-MADLDLA-----EFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 459 ~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~-l~~~~~A-----~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
.++|+|++|+.+|+++|+++|++..+|+++|.+|.. .+.+++| +.+|++|++++|++..++..++.+.....
T Consensus 211 ~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g 288 (382)
T 2h6f_A 211 QEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTC
T ss_pred HHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999999 5554888 59999999999999999999888877644
No 106
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.31 E-value=2e-12 Score=109.27 Aligned_cols=98 Identities=16% Similarity=0.095 Sum_probs=83.4
Q ss_pred cCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH
Q 008400 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (567)
Q Consensus 412 ~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a 491 (567)
.|+|++|+..|++|+..... ......+++++|.||.++|+|++|+..++++++++|+++.+++++|.+
T Consensus 3 ~g~~~~A~~~~~~al~~~~~------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 70 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQ------------GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMV 70 (117)
T ss_dssp ----CCCHHHHHHHHSSCCC------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCC------------CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 68899999999999986210 012345689999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008400 492 YIQMADLDLAEFDIKKALEIDPDNRDVKLE 521 (567)
Q Consensus 492 ~~~l~~~~~A~~~~~~al~l~P~n~~~~~~ 521 (567)
|..+|++++|+..|++++++.|++..+...
T Consensus 71 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 71 LYNLGRYEQGVELLLKIIAETSDDETIQSY 100 (117)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCCCHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 999999999999999999999999776543
No 107
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.31 E-value=1.3e-11 Score=116.56 Aligned_cols=135 Identities=19% Similarity=0.084 Sum_probs=107.0
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCC---------h-----------HHHHH----------HHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG---------D-----------EEKKQ----------AKALKV 448 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~---------~-----------e~~~~----------~~~~~~ 448 (567)
+..+...|..++..|++++|+..|++++...|.+.... . ....+ ..+...
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 45677899999999999999999999999877543110 0 00000 011124
Q ss_pred HHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
.+++++|.++..+|++++|+..++++++++ +++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+...
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~ 197 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLL 197 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH
Confidence 578999999999999999999999999999 9999999999999999999999999999999999999888888877666
Q ss_pred HHHHHH
Q 008400 529 MKEYNK 534 (567)
Q Consensus 529 ~~~~~~ 534 (567)
.++..+
T Consensus 198 ~g~~~~ 203 (217)
T 2pl2_A 198 KGKAEE 203 (217)
T ss_dssp ------
T ss_pred ccCHHH
Confidence 655543
No 108
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.31 E-value=1.9e-11 Score=111.58 Aligned_cols=147 Identities=14% Similarity=0.164 Sum_probs=116.4
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------------ChHHHHHHHH------HHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQAKA------LKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~~~------~~~~~~~nla~~~~ 459 (567)
+..+.+.|+.++..|+|++|+..|++|++..|.+... .++....... ....++.++|.++.
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF 84 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 5567889999999999999999999999987754321 0011111111 12446788899999
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKF 539 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~ 539 (567)
..++++.|+..+.+++.++|++..+++.+|.+|..+|++++|+..|+++++++|.+..+...++.+...+++..++ ...
T Consensus 85 ~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A-~~~ 163 (184)
T 3vtx_A 85 MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEA-VKY 163 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHH-HHH
Confidence 9999999999999999999999999999999999999999999999999999999999988888888777766544 346
Q ss_pred HHHhhHh
Q 008400 540 YGNMFAK 546 (567)
Q Consensus 540 ~~~~f~~ 546 (567)
|++.+..
T Consensus 164 ~~~al~~ 170 (184)
T 3vtx_A 164 FKKALEK 170 (184)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 6666654
No 109
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.30 E-value=3.6e-11 Score=101.13 Aligned_cols=114 Identities=32% Similarity=0.416 Sum_probs=102.3
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|.+++...+.. ..+++++|.++.+.+++++|+..+++++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 4567888999999999999999999999876532 2347899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
|.+..+++.+|.+|..++++++|+..|+++++++|++..+...+..+..
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 122 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888777766643
No 110
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.28 E-value=3.5e-12 Score=132.34 Aligned_cols=99 Identities=25% Similarity=0.441 Sum_probs=87.1
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCC
Q 008400 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (567)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (567)
..+..||.|++||+++. ||+.|++++ +.|+.|.+|.|++||||+++|.||++|++++|.||++.+||..+. +
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-----a 227 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-----K 227 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC-----C
Confidence 56889999999999994 999999987 479999999999999999999999999999999999999998764 6
Q ss_pred CCcEEEEEEEEEEeeccccccccceee
Q 008400 131 NATLQFDVELLSWTSVKDICKDGGIIK 157 (567)
Q Consensus 131 ~~~l~~~vel~~~~~~~~~~~d~~~~~ 157 (567)
+.+++|+|+|+++.......-+..+.+
T Consensus 228 g~~~~F~V~v~~v~~~~lpeldDEfak 254 (432)
T 1w26_A 228 GKAAKFAINLKKVEERELPELTAEFIK 254 (432)
T ss_dssp SCEEEEEEECCEECCEECCCCSHHHHT
T ss_pred CceEEEEEEEEEEeccCCCCcchHHHH
Confidence 799999999999987555555555554
No 111
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.27 E-value=3.8e-11 Score=102.99 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=89.3
Q ss_pred HHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
.....+.|+|.+|++.|+|++|+..|+++|+++|.++.+|+++|.+|..+|++++|+.+|++|++++|++..+...++.+
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 90 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAAC 90 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999889888
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhh
Q 008400 526 KEKMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 526 ~~~~~~~~~~e~~~~~~~f~~~~ 548 (567)
...+++..++ ...|++.+..-+
T Consensus 91 ~~~~~~~~~A-~~~~~~al~l~P 112 (126)
T 4gco_A 91 LVAMREWSKA-QRAYEDALQVDP 112 (126)
T ss_dssp HHHTTCHHHH-HHHHHHHHHHCT
T ss_pred HHHCCCHHHH-HHHHHHHHHHCc
Confidence 8877766644 346666665433
No 112
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.27 E-value=1.5e-11 Score=101.59 Aligned_cols=102 Identities=18% Similarity=0.172 Sum_probs=93.6
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|.+|+..|++++...+... .++.++|.++..+++|++|+..++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 70 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEES---------------KYWLMKGKALYNLERYEEAVDCYNYVINVI 70 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 34577889999999999999999999999866432 348899999999999999999999999999
Q ss_pred CC--CHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHhCCCC
Q 008400 479 SR--NVKALYRRAQAYIQM-ADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 479 p~--~~ka~~~~a~a~~~l-~~~~~A~~~~~~al~l~P~n 515 (567)
|. +..+++++|.++..+ |++++|++++++++...|.+
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 71 EDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred cccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 99 999999999999999 99999999999999999976
No 113
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.26 E-value=8.1e-11 Score=104.10 Aligned_cols=78 Identities=15% Similarity=0.287 Sum_probs=71.2
Q ss_pred CCCCCeEEEEEEEEeCCCeEeeeccceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCCCCC
Q 008400 169 PKDLDEVLVNYEARLEDGMVVGKADGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAVPPN 248 (567)
Q Consensus 169 ~~~~d~V~v~y~~~~~~g~~~~~~~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ip~~ 248 (567)
++.||.|+++|+++ .+|++|+++. +.|.+|.++++|||+++|.+|++|+++++.|||+.+||+. +
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~-------------~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPH-------------D 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCC-------------C
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCC-------------C
Confidence 45789999999999 8999999888 9999999999999999999999999999999999999954 4
Q ss_pred CeEEEEEEeeccc
Q 008400 249 ATLQIALELVSWK 261 (567)
Q Consensus 249 ~~l~~~v~l~~~~ 261 (567)
..+++.|.+..|.
T Consensus 68 ~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 68 PEGVQVVPLSAFP 80 (158)
T ss_dssp GGGEEEEEGGGSC
T ss_pred cceEEEEEHHHCC
Confidence 5688999998884
No 114
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.26 E-value=5e-11 Score=108.76 Aligned_cols=118 Identities=15% Similarity=0.058 Sum_probs=92.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC------------C-hHHHH------HHHHHHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF------------G-DEEKK------QAKALKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~------------~-~e~~~------~~~~~~~~~~~nla~~~~ 459 (567)
+..+...|..+++.|++++|+..|.+++...+..... . +.... ........++.++|.+|.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 4456777888888888888888888887765542210 0 00000 011112456889999999
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
++|+|++|+..++++++++|.++.+++++|.+|..+|++++|+.+|++|++++|++.
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 999999999999999999999999999999999999999999999999999999873
No 115
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.26 E-value=3.4e-11 Score=112.87 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=87.7
Q ss_pred hhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHH
Q 008400 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK 483 (567)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k 483 (567)
+.|..+++.|+|++|+..|+++++..|.+. .+++++|.+|..+|++++|+.+|+++++++|+++.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQKAPNNV---------------DCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 389999999999999999999999987644 34899999999999999999999999999999998
Q ss_pred HHHHHHHHHHhc-----------------------------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 484 ALYRRAQAYIQM-----------------------------------ADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 484 a~~~~a~a~~~l-----------------------------------~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
+++++|.+|+.. ++|++|+.+|++|++++|++ .+...+.++
T Consensus 124 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i 199 (208)
T 3urz_A 124 ANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKI 199 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHH
Confidence 888888776443 45777888888888888864 344444444
No 116
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.25 E-value=4.3e-11 Score=108.62 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=99.6
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHH-HHhccCH--HHHHHHHHHHh
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAAC-KLKLKDY--KQAEKLCTKVL 475 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~-~~k~~~~--~~Ai~~~~~al 475 (567)
+..+...|..++..|+|++|+..|.+++...+.+. .++.++|.+ +...+++ ++|+..+++++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA---------------ELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH---------------HHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH---------------HHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 45678899999999999999999999999877543 348899999 8899999 99999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 476 DLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 476 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
+.+|++..+++++|.+|..+|++++|+..|+++++++|++......+..+
T Consensus 109 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i 158 (177)
T 2e2e_A 109 ALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESI 158 (177)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999986555554444
No 117
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.24 E-value=5.2e-11 Score=112.78 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=103.0
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
.+...|..++..|+|++|+..|.+++...+.. ..++.++|.+|.++|++++|+..++++++++|+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAIKKNYNL---------------ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch---------------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 45568999999999999999999999876642 345889999999999999999999999999999
Q ss_pred CH-------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHH
Q 008400 481 NV-------KALYRRAQAYIQMADLDLAEFDIKKALEIDPD--NRDVKLEYKTLKEKMKEY 532 (567)
Q Consensus 481 ~~-------ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--n~~~~~~l~~~~~~~~~~ 532 (567)
+. .+|+++|.++..+|++++|+..|+++++++|+ +..+...++.+.......
T Consensus 109 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 109 NATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 98 77999999999999999999999999999999 877777777775544443
No 118
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.24 E-value=3.1e-12 Score=113.59 Aligned_cols=99 Identities=12% Similarity=0.006 Sum_probs=88.6
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
..+++++|.+++++|+|++|+..|++++.++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+...++.+..
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~ 115 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQL 115 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhHhh
Q 008400 528 KMKEYNKKEAKFYGNMFAKM 547 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~~ 547 (567)
.+++..++. ..|.+.....
T Consensus 116 ~lg~~~eA~-~~~~~al~l~ 134 (151)
T 3gyz_A 116 RLKAPLKAK-ECFELVIQHS 134 (151)
T ss_dssp HTTCHHHHH-HHHHHHHHHC
T ss_pred HcCCHHHHH-HHHHHHHHhC
Confidence 877766544 4666666543
No 119
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.24 E-value=4.3e-11 Score=111.78 Aligned_cols=131 Identities=21% Similarity=0.170 Sum_probs=109.7
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|.+++.. ...+++++|.+|.++|+|++|+.+|++++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQDP------------------HSRICFNIGCMYTILKNMTEAEKAFTRSIN 65 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34667889999999999999999999998521 123689999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR----------------DVKLEYKTLKEKMKEYNKKEAKFY 540 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~----------------~~~~~l~~~~~~~~~~~~~e~~~~ 540 (567)
++|+++.+++++|.+|..+|++++|+.+|++++++.|++. .+...+..+...+++..++ ...|
T Consensus 66 ~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~~ 144 (213)
T 1hh8_A 66 RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKA-EEQL 144 (213)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHH-HHHH
T ss_pred hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHH-HHHH
Confidence 9999999999999999999999999999999999999876 7777777776666555433 3355
Q ss_pred HHhhHh
Q 008400 541 GNMFAK 546 (567)
Q Consensus 541 ~~~f~~ 546 (567)
.+....
T Consensus 145 ~~al~~ 150 (213)
T 1hh8_A 145 ALATSM 150 (213)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 555443
No 120
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.21 E-value=1.8e-10 Score=115.90 Aligned_cols=122 Identities=25% Similarity=0.351 Sum_probs=108.7
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (567)
......|..+++.|++++|+..|++++...+.+. .....++.++|.|+.++|++++|+..++++++.+|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 303 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSVA-----------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP 303 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCch-----------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3455679999999999999999999999876422 23445688999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 008400 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEY 532 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~ 532 (567)
+++.+++++|.+|..+|++++|+..|+++++++|++..++..+..+...+++.
T Consensus 304 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 304 DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887776654
No 121
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.18 E-value=3.3e-10 Score=109.71 Aligned_cols=114 Identities=19% Similarity=0.055 Sum_probs=102.0
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|++++...+... .++.++|.+|..+|++++|+.+++++++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~---------------~~~~~la~~~~~~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMP---------------EVFNYLGIYLTQAGNFDAAYEAFDSVLE 105 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 4567788999999999999999999999999866432 3488999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
++|.+..+++++|.+|..+|++++|+..|+++++++|++......+..+
T Consensus 106 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 106 LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999997655554443
No 122
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.17 E-value=1.1e-10 Score=111.72 Aligned_cols=117 Identities=18% Similarity=0.140 Sum_probs=61.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+......+..+.+.|++++|+..|.+++...+. ...++.++|.++..+|++++|+..+++++..+
T Consensus 105 a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 169 (258)
T 3uq3_A 105 SLTEHRTADILTKLRNAEKELKKAEAEAYVNPE---------------KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA 169 (258)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH---------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc---------------hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 333334445555555555555555555554332 12235555555555555555555555555555
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
|.++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+...++
T Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g 221 (258)
T 3uq3_A 170 PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVK 221 (258)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 5555555555555555555555555555555555555555544544444443
No 123
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.17 E-value=1.1e-11 Score=126.85 Aligned_cols=101 Identities=20% Similarity=0.428 Sum_probs=87.8
Q ss_pred CCCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCC
Q 008400 51 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPP 130 (567)
Q Consensus 51 ~~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~ 130 (567)
..+..||.|+|||+++ .||+.|+++. +.|+.|.+|.|++||||+++|.||++|++++|.|+++..||..+. +
T Consensus 159 ~~~~~gD~V~i~y~g~-~dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l-----a 230 (392)
T 1t11_A 159 EAAENGKRVSIDFVGS-IDGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL-----K 230 (392)
T ss_dssp CCCCTTCEEEEEEEEE-SSSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT-----S
T ss_pred CCCCCCCEEEEEEEEE-ECCEEccCCC--ccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC-----C
Confidence 4688999999999999 4999999884 479999999999999999999999999999999998888987664 6
Q ss_pred CCcEEEEEEEEEEeeccccccccceeeee
Q 008400 131 NATLQFDVELLSWTSVKDICKDGGIIKKI 159 (567)
Q Consensus 131 ~~~l~~~vel~~~~~~~~~~~d~~~~~~i 159 (567)
|.+++|+|+|+++.......-+..+.+.+
T Consensus 231 Gk~~~F~V~v~~i~~~~lpeldDEfak~~ 259 (392)
T 1t11_A 231 GKAAKFAIKVNKVEARELPELNDEFVARF 259 (392)
T ss_dssp SCEEEECCCEEEEEEEECCCCSTGGGGGG
T ss_pred CCeEEEEEEEEEEEcCCCCCcCHHHHHHh
Confidence 89999999999999866666666666543
No 124
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.16 E-value=2.9e-10 Score=96.64 Aligned_cols=129 Identities=27% Similarity=0.385 Sum_probs=107.4
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
.+...|..++..|++++|+..|.+++...+.. ..++.++|.++...+++++|+..+++++..+|.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 67 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 67 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc---------------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC
Confidence 45678899999999999999999999875432 234788999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
+..+++.+|.++...|++++|+..++++++..|.+..+...+..+....++..+. ...|.++..
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A-~~~~~~~~~ 131 (136)
T 2fo7_A 68 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA-IEYYQKALE 131 (136)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH-HHHHHHHHc
Confidence 9999999999999999999999999999999999987777777766555444432 334554443
No 125
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.16 E-value=4.3e-10 Score=106.56 Aligned_cols=111 Identities=13% Similarity=0.128 Sum_probs=96.4
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|++++...|.... ...+++++|.||+++|+|++|+..++++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY------------SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 456778899999999999999999999998775432 23458899999999999999999999999999
Q ss_pred CCCHH---HHHHHHHHHHh------------------cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008400 479 SRNVK---ALYRRAQAYIQ------------------MADLDLAEFDIKKALEIDPDNRDVKLE 521 (567)
Q Consensus 479 p~~~k---a~~~~a~a~~~------------------l~~~~~A~~~~~~al~l~P~n~~~~~~ 521 (567)
|++.. ++|++|.++.. +|++++|+..|+++++..|++..+...
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a 135 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDA 135 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHH
Confidence 99865 89999999986 579999999999999999999755443
No 126
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.16 E-value=1.4e-10 Score=125.88 Aligned_cols=132 Identities=7% Similarity=0.017 Sum_probs=114.1
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|++|++..+.+. .+++++|.+|..+|++++|+.+++++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHP---------------EAVARLGRVRWTQQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 56688899999999999999999999999876533 348899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhHh
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM---KEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~---~~~~~~e~~~~~~~f~~ 546 (567)
|++..+++++|.+|..+|++++|+..|+++++++|++..+...+..+...+ ++..+ ....|++.+..
T Consensus 88 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~-A~~~~~~al~~ 157 (568)
T 2vsy_A 88 PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDV-LSAQVRAAVAQ 157 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHH-HHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHH-HHHHHHHHHhc
Confidence 999999999999999999999999999999999999998888888887766 44443 33455555443
No 127
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.15 E-value=4.5e-10 Score=108.76 Aligned_cols=139 Identities=15% Similarity=0.211 Sum_probs=106.5
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh--------ccCHHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK--------LKDYKQAEKL 470 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k--------~~~~~~Ai~~ 470 (567)
...+...|..+++.|+|.+|+..|++++...|.+.. ...+++++|.|+++ ++++++|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR------------VPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT------------HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch------------hHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 445677888888888888888888888887665432 23458899999999 9999999999
Q ss_pred HHHHhccCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHHH
Q 008400 471 CTKVLDLDSRNVKAL-----------------YRRAQAYIQMADLDLAEFDIKKALEIDPDN---RDVKLEYKTLKEKMK 530 (567)
Q Consensus 471 ~~~al~~~p~~~ka~-----------------~~~a~a~~~l~~~~~A~~~~~~al~l~P~n---~~~~~~l~~~~~~~~ 530 (567)
+++++..+|++..+. +.+|.+|..+|+|++|+..|+++++..|++ ..+...+..+...+.
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 999999999986555 999999999999999999999999999995 345666666655441
Q ss_pred ---------HHHHHHHHHHHHhhHhhhh
Q 008400 531 ---------EYNKKEAKFYGNMFAKMKS 549 (567)
Q Consensus 531 ---------~~~~~e~~~~~~~f~~~~~ 549 (567)
..-++....|+++....+.
T Consensus 200 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 227 (261)
T 3qky_A 200 EQSVRARQPERYRRAVELYERLLQIFPD 227 (261)
T ss_dssp HTSCGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccchhhcccchHHHHHHHHHHHHHHCCC
Confidence 1222334566666655443
No 128
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.15 E-value=1.3e-10 Score=112.65 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=97.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..+++.|+|++|+..|++++...|.+.. ...+++++|.||+++|+|++|+..+++++...
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~------------~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEW------------AADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTT------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcc------------hHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 567889999999999999999999999998775431 24568999999999999999999999999998
Q ss_pred CCC---HHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHhCCCCHHHHH
Q 008400 479 SRN---VKALYRRAQAYIQ--------MADLDLAEFDIKKALEIDPDNRDVKL 520 (567)
Q Consensus 479 p~~---~ka~~~~a~a~~~--------l~~~~~A~~~~~~al~l~P~n~~~~~ 520 (567)
|++ ..+++++|.++.. +|++++|+..|+++++.+|++..+..
T Consensus 83 p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 135 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDD 135 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHH
Confidence 855 6899999999999 99999999999999999999865553
No 129
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.14 E-value=6.7e-10 Score=100.16 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=109.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|++++|+..|.+++...+.. ..++.++|.++...+++++|+..+++++..+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADAPDN---------------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC---------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 3456778888899999999999999999875532 2348899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
|.+..+++.+|.++..+|++++|+..|+++++++|.+..+...+..+....++..+ ....|.++...
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~-A~~~~~~~~~~ 173 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEE-ALPHFKKANEL 173 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHH-HHHHHHHHHHc
Confidence 99999999999999999999999999999999999998888888877766655443 33455555544
No 130
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.14 E-value=1.8e-10 Score=122.32 Aligned_cols=121 Identities=16% Similarity=0.031 Sum_probs=108.6
Q ss_pred hhhhhhhhHHHhc---------CcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc--------c
Q 008400 400 GKKKEQGNTLFKA---------GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL--------K 462 (567)
Q Consensus 400 ~~~~~~G~~~~~~---------g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~--------~ 462 (567)
..+...|..++.. |+|++|+..|++|+++.+.+. .+++++|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG---------------RSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHHHHhhccccc
Confidence 4567788888888 999999999999999877543 3488999999999 9
Q ss_pred CHHHHHHHHHHHhccCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 008400 463 DYKQAEKLCTKVLDLDS---RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKK 535 (567)
Q Consensus 463 ~~~~Ai~~~~~al~~~p---~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~ 535 (567)
+|++|+..|+++++++| .++.+|+++|.+|..+|+|++|+.+|++|++++|++..++..+..+...+++..+.
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999999998888888887777665543
No 131
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.14 E-value=1.6e-10 Score=107.82 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=94.0
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|.+++...+... .+++++|.+|.++|++++|+.++++++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLA---------------VAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch---------------HHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 35678999999999999999999999999866432 358999999999999999999999999988
Q ss_pred CCCH----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 479 SRNV----------------KALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 479 p~~~----------------ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
|.+. .+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 8876 9999999999999999999999999999999873
No 132
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.14 E-value=3.6e-11 Score=133.50 Aligned_cols=126 Identities=14% Similarity=0.089 Sum_probs=74.2
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------------ChHHHHHHHH------HHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQAKA------LKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~~~------~~~~~~~nla~~~~ 459 (567)
+..+...|..++..|+|++|+..|+++++..+.+... .++.....+. ....+++|+|.||.
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~ 512 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAE 512 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 4455666666666666666666666666665543211 0000000000 01233666677777
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
++|+|++ +.+|++|++++|++..+++++|.+|..+|++++|+.+|++|++++|++..++..+..+
T Consensus 513 ~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 513 LAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT 577 (681)
T ss_dssp HHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHH
T ss_pred HcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHH
Confidence 7777766 7777777777777777777777777777777777777777777777766555555444
No 133
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.12 E-value=2.7e-10 Score=120.91 Aligned_cols=131 Identities=15% Similarity=-0.008 Sum_probs=113.9
Q ss_pred HhhhhhhhhHHHhcCcH-HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 399 AGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
+..+...|..++..|+| ++|+..|++|++..+... .+++++|.||.++|++++|+.+|++++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~---------------~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELV---------------EAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56778999999999999 999999999999876543 34899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--------HHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQM---------ADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM--------KEYNKKEAKFY 540 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l---------~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~--------~~~~~~e~~~~ 540 (567)
+|+ ..+++++|.+|..+ |++++|+..|++|++++|++..++..+..+...+ ++..++ ...|
T Consensus 167 ~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A-~~~~ 244 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQA-LSAY 244 (474)
T ss_dssp CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH-HHHH
T ss_pred CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHH-HHHH
Confidence 999 79999999999999 9999999999999999999999998888887766 555443 3455
Q ss_pred HHhhHh
Q 008400 541 GNMFAK 546 (567)
Q Consensus 541 ~~~f~~ 546 (567)
.+....
T Consensus 245 ~~al~~ 250 (474)
T 4abn_A 245 AQAEKV 250 (474)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
No 134
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.11 E-value=4.9e-10 Score=108.54 Aligned_cols=131 Identities=14% Similarity=0.053 Sum_probs=87.5
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
.+...|..++..|+|++|+..|.+++. .+.+.. ....++.++|.++..+|++++|+.+++++++++|.
T Consensus 39 ~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~-----------~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~ 106 (272)
T 3u4t_A 39 IYNRRAVCYYELAKYDLAQKDIETYFS-KVNATK-----------AKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT 106 (272)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTT-----------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchh-----------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc
Confidence 334445555555555555555555554 221111 12344778888888888888888888888888888
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhH
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK-TLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~-~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
+..+++++|.+|..+|++++|+..|+++++++|.+..+...+. .+.... .-++..+.|.++..
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~~ 170 (272)
T 3u4t_A 107 RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK--EYVKADSSFVKVLE 170 (272)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 8888888888888888888888888888888888877777766 443332 22223345555544
No 135
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.11 E-value=7.3e-11 Score=104.28 Aligned_cols=100 Identities=12% Similarity=0.012 Sum_probs=87.1
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
..+++++|.+++..|+|++|+..+++++.++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..+...++.+..
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 100 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLL 100 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999998888888877
Q ss_pred HHHHHHHHHHHHHHHhhHhhh
Q 008400 528 KMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~~~ 548 (567)
.+++..++. ..|.+......
T Consensus 101 ~~g~~~~A~-~~~~~al~~~p 120 (148)
T 2vgx_A 101 QXGELAEAE-SGLFLAQELIA 120 (148)
T ss_dssp HTTCHHHHH-HHHHHHHHHHT
T ss_pred HcCCHHHHH-HHHHHHHHHCc
Confidence 776665443 45666655433
No 136
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.9e-11 Score=101.30 Aligned_cols=93 Identities=29% Similarity=0.419 Sum_probs=63.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|++|+...+.+. .+++|+|.|+.++|+|++|+.+|+++++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 68 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP---------------VGYSNKAMALIKLGEYTQAIQMCQQGLRYT 68 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 45566677777777777777777777776655432 236677777777777777777777777777
Q ss_pred CCC------HHHHHHHHHHHHhcCCHHHHHHHHH
Q 008400 479 SRN------VKALYRRAQAYIQMADLDLAEFDIK 506 (567)
Q Consensus 479 p~~------~ka~~~~a~a~~~l~~~~~A~~~~~ 506 (567)
|++ .++++++|.++..+|+++.|+..++
T Consensus 69 p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 69 STAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 776 6777777777777776666655544
No 137
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.10 E-value=6.2e-10 Score=106.43 Aligned_cols=123 Identities=12% Similarity=0.115 Sum_probs=105.4
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|++++|+..|++++.+.+. +.++.+++++++|+..+++++..+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-----------------------~~~~~~~~~~~~a~~~~~~~~~~~ 135 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT-----------------------ADILTKLRNAEKELKKAEAEAYVN 135 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-----------------------HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch-----------------------hHHHHHHhHHHHHHHHHHHHHHcC
Confidence 677889999999999999999999999986542 457888899999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
|.+..+++++|.++..+|++++|+..|+++++++|.+..+...+..+....++..+.. ..|.+...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~al~ 201 (258)
T 3uq3_A 136 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAI-ADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHH-HHHHHHHH
Confidence 9999999999999999999999999999999999999988888888776666554332 34444443
No 138
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.10 E-value=7.5e-11 Score=106.98 Aligned_cols=133 Identities=11% Similarity=0.093 Sum_probs=108.1
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (567)
.++...++.++..|+|++|+..|.+++...+.+. .+++++|.+|..+++|++|+..+.+++.++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 75 (177)
T 2e2e_A 11 QRQRDPLHQFASQQNPEAQLQALQDKIRANPQNS---------------EQWALLGEYYLWQNDYSNSLLAYRQALQLRG 75 (177)
T ss_dssp CCSSTTTCCCC-----CCCCHHHHHHHHHCCSCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHhhhhhhhhhccCHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Confidence 4556667778899999999999999999876433 3488999999999999999999999999999
Q ss_pred CCHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Q 008400 480 RNVKALYRRAQA-YIQMADL--DLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 480 ~~~ka~~~~a~a-~~~l~~~--~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~ 548 (567)
+++.+++++|.+ +...|++ ++|+..|+++++++|++..+...+..+....++..++ ...|.+.+....
T Consensus 76 ~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~~p 146 (177)
T 2e2e_A 76 ENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQA-IELWQKVMDLNS 146 (177)
T ss_dssp SCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHH-HHHHHHHHhhCC
Confidence 999999999999 8899999 9999999999999999998888888887766655543 345666665443
No 139
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.09 E-value=1.2e-10 Score=129.31 Aligned_cols=87 Identities=14% Similarity=0.025 Sum_probs=77.6
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
...+++++|.+|+++|+|++|+.+|++|++++|++..+++++|.+|..+|+|++ +.+|++|++++|++..+...++.+.
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~ 544 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARAR 544 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999 9999999999999988888888877
Q ss_pred HHHHHHHH
Q 008400 527 EKMKEYNK 534 (567)
Q Consensus 527 ~~~~~~~~ 534 (567)
..+++.++
T Consensus 545 ~~~g~~~~ 552 (681)
T 2pzi_A 545 SAEGDRVG 552 (681)
T ss_dssp HHTTCHHH
T ss_pred HHcCCHHH
Confidence 66655543
No 140
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.09 E-value=5.9e-10 Score=93.35 Aligned_cols=94 Identities=13% Similarity=0.054 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC
Q 008400 417 RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA 496 (567)
Q Consensus 417 ~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~ 496 (567)
.|+..|++++...+.+. .+++++|.+|..+|+|++|+..|++++.++|.+..+++++|.+|..+|
T Consensus 3 ~a~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLAQGTDNM---------------LLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHTTTCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 57889999998776543 348899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCC--HHHHHHHHHH
Q 008400 497 DLDLAEFDIKKALEIDPDN--RDVKLEYKTL 525 (567)
Q Consensus 497 ~~~~A~~~~~~al~l~P~n--~~~~~~l~~~ 525 (567)
++++|+..|+++++++|.+ ......+...
T Consensus 68 ~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~ 98 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQSRGDQQVVKELQVF 98 (115)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 9999999999999998853 3343444333
No 141
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.09 E-value=1.5e-09 Score=113.26 Aligned_cols=121 Identities=25% Similarity=0.355 Sum_probs=106.8
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (567)
......|..+++.|+|++|+..|++++...+.+. .....++.++|.++.++|++++|+..|++++.++|
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIA-----------EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSH-----------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch-----------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 3445669999999999999999999998766422 23345689999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 008400 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 531 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~ 531 (567)
+++.+|+.+|.+|..+|++++|+.+|+++++++|++..+...+..+...++.
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999888887666544
No 142
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.08 E-value=5.3e-10 Score=100.85 Aligned_cols=132 Identities=20% Similarity=0.240 Sum_probs=111.3
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|++++|+..|++++...+.. ..++.++|.++...+++++|+..+++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFD---------------VDVALHLGIAYVKTGAVDRGTELLERSLAD 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccC---------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 45677889999999999999999999998765532 235889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
+|.+..+++.+|.++...|++++|+..|+++++++|.+..+...+..+....++..+. ...|.++..
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A-~~~~~~~~~ 138 (186)
T 3as5_A 72 APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEA-IDSFKIALG 138 (186)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHH-HHHHHHHHh
Confidence 9999999999999999999999999999999999999988887777776655544432 234444443
No 143
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.07 E-value=9e-10 Score=108.89 Aligned_cols=112 Identities=15% Similarity=0.048 Sum_probs=95.6
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc-cCHHHHHHHHHHHh
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-KDYKQAEKLCTKVL 475 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-~~~~~Ai~~~~~al 475 (567)
..+..+.+.|+.+.+.|+|++|+..|++|+.+.+..... .....++.|+|.+|..+ |++++|+.+|++|+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF---------RRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 346778889999999999999999999999887654321 22355688999999996 99999999999999
Q ss_pred ccCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 008400 476 DLDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD 517 (567)
Q Consensus 476 ~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~ 517 (567)
++.|.+ ..++.++|.+|..+|+|++|+..|++++++.|++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 998754 578999999999999999999999999999998753
No 144
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.07 E-value=4.5e-10 Score=113.89 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=86.8
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (567)
..+...|..++..|+|++|+..|++++...+... .+++++|.++.++|++++|+..++++++++|
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDY---------------LLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3455667777777777777777777777654322 2467778888888888888888888888888
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHHHHHHH
Q 008400 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN-----------RDVKLEYKTLKEKMKEYNK 534 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n-----------~~~~~~l~~~~~~~~~~~~ 534 (567)
.+..+++++|.+|..+|++++|+..|+++++++|++ ..+...+..+...+++..+
T Consensus 283 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 348 (368)
T 1fch_A 283 GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDA 348 (368)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGG
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHh
Confidence 778888888888888888888888888888877777 5666666666665554443
No 145
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.07 E-value=7.7e-10 Score=109.16 Aligned_cols=130 Identities=13% Similarity=0.080 Sum_probs=98.2
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHH---------
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEK--------- 469 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~--------- 469 (567)
...+...|..++..|++++|+..|++++...|.+.. +++++|.+++.+|++++|+.
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~---------------a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGE---------------IGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHH---------------HHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchh---------------HHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 456788999999999999999999999998876542 26666666666666666554
Q ss_pred -------------------------HHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 008400 470 -------------------------LCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN--RDVKLEY 522 (567)
Q Consensus 470 -------------------------~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n--~~~~~~l 522 (567)
.+++++..+|+++.+++++|.+|...|++++|+..|+++++++|++ ..++..+
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 4555566788888899999999999999999999999999999988 6677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 008400 523 KTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 523 ~~~~~~~~~~~~~e~~~~~~~f 544 (567)
..+...+++..+. ...|++.+
T Consensus 262 ~~~~~~~g~~~~a-~~~~r~al 282 (287)
T 3qou_A 262 QEILAALGTGDAL-ASXYRRQL 282 (287)
T ss_dssp HHHHHHHCTTCHH-HHHHHHHH
T ss_pred HHHHHHcCCCCcH-HHHHHHHH
Confidence 7776666544332 23444443
No 146
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.06 E-value=5e-10 Score=96.02 Aligned_cols=70 Identities=20% Similarity=0.289 Sum_probs=66.1
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
...++.|+|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 3455789999999999999999999999999999999999999999999999999999999999998874
No 147
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.06 E-value=1.2e-09 Score=103.51 Aligned_cols=129 Identities=17% Similarity=0.077 Sum_probs=63.3
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------------ChHHHHHHHH------HHHHHHhhHHHHHHh
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQAKA------LKVACNLNNAACKLK 460 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~~~------~~~~~~~nla~~~~k 460 (567)
..+...|..++..|++++|+..|.+++...+..... .++-....+. ....++.++|.++.+
T Consensus 58 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~ 137 (243)
T 2q7f_A 58 IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVK 137 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 445566677777777777777777777664432110 0000000000 011234445555555
Q ss_pred ccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 461 LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 461 ~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
+|++++|+..+++++..+|.+..+++.+|.++..+|++++|+..|+++++.+|++..+...+..+...
T Consensus 138 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~ 205 (243)
T 2q7f_A 138 LEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAY 205 (243)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Confidence 55555555555555555555555555555555555555555555555555555554444444444333
No 148
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.06 E-value=1.7e-09 Score=102.43 Aligned_cols=132 Identities=11% Similarity=0.036 Sum_probs=103.3
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh------------------c
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK------------------L 461 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k------------------~ 461 (567)
..+...|..+++.|+|++|+..|+++++..|.+... ..+++++|.|+.+ +
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~------------~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 109 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNI------------DYVMYMRGLTNMALDDSALQGFFGVDRSDRDP 109 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTH------------HHHHHHHHHHHHHHHC--------------CC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcH------------HHHHHHHHHHHHhhhhhhhhhhhccchhhcCc
Confidence 457788999999999999999999999988865531 2236677777765 6
Q ss_pred cCHHHHHHHHHHHhccCCCCHHHH-----------------HHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHH
Q 008400 462 KDYKQAEKLCTKVLDLDSRNVKAL-----------------YRRAQAYIQMADLDLAEFDIKKALEIDPDNR---DVKLE 521 (567)
Q Consensus 462 ~~~~~Ai~~~~~al~~~p~~~ka~-----------------~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~---~~~~~ 521 (567)
+++++|+..++++++..|++..+. +.+|.+|...|+|++|+..|+++++..|++. .+...
T Consensus 110 ~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~ 189 (225)
T 2yhc_A 110 QQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPL 189 (225)
T ss_dssp HHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHH
Confidence 799999999999999999987554 6789999999999999999999999999986 34555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 008400 522 YKTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 522 l~~~~~~~~~~~~~e~~~~~~~f 544 (567)
+..+...+++..+.. +.++++.
T Consensus 190 l~~~~~~~g~~~~A~-~~~~~l~ 211 (225)
T 2yhc_A 190 MENAYRQMQMNAQAE-KVAKIIA 211 (225)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHHH
T ss_pred HHHHHHHcCCcHHHH-HHHHHHH
Confidence 555555555554332 3444443
No 149
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.06 E-value=8.6e-10 Score=105.55 Aligned_cols=132 Identities=15% Similarity=0.067 Sum_probs=96.1
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
.+...|..++..|++++|+..|.+++. .+.. .....++.++|.++.++|++++|+..++++++.+|.
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~-~~~~------------~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQ-DTLY------------PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTT-CTTC------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHh-CccC------------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 345566666666777777777776665 1000 112345788899999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
+..+++.+|.++..+|++++|+..|+++++.+|.+..+...+..+....++..+ ....++++...
T Consensus 174 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-A~~~~~~~~~~ 238 (252)
T 2ho1_A 174 QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDT-AASYGLQLKRL 238 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHH-HHHHHHHHHHH
Confidence 999999999999999999999999999999999888777777776665554443 23455555444
No 150
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.06 E-value=5.7e-10 Score=101.31 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 465 KQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN--RDVKLEYKTLKEKMKEYNKKEAKFYGN 542 (567)
Q Consensus 465 ~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n--~~~~~~l~~~~~~~~~~~~~e~~~~~~ 542 (567)
..|+..++++++.+|+++.+++++|.++..+|++++|+..|+++++++|++ ..++..+..+...+++..+ ....|++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~-A~~~y~~ 169 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNA-IASKYRR 169 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCH-HHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCc-HHHHHHH
Confidence 345677777777788888999999999999999999999999999999875 4467777766665554433 3345555
Q ss_pred hhHh
Q 008400 543 MFAK 546 (567)
Q Consensus 543 ~f~~ 546 (567)
.+..
T Consensus 170 al~~ 173 (176)
T 2r5s_A 170 QLYS 173 (176)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 151
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.06 E-value=1.4e-09 Score=107.48 Aligned_cols=115 Identities=17% Similarity=0.087 Sum_probs=73.7
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHH----HhccCHHHHHHHHHHHh
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACK----LKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~----~k~~~~~~Ai~~~~~al 475 (567)
..+...|..+.+.|++++|+..|++++...+... ..+++.++ ...+++++|+..+++++
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~-----------------~~~l~~a~~~l~~~~~~~~eA~~~~~~~l 193 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQDQDEDAT-----------------LTQLATAWVSLAAGGEKLQDAYYIFQEMA 193 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----------------HHHHHHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcH-----------------HHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 4556677888888888899888888887754321 12222222 22366666666666666
Q ss_pred ccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 008400 476 DLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKE 531 (567)
Q Consensus 476 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~ 531 (567)
+.+|+++.+++++|.++..+|++++|+..|+++++++|+|.++...+..+...+++
T Consensus 194 ~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~ 249 (291)
T 3mkr_A 194 DKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGK 249 (291)
T ss_dssp HHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Confidence 66666666666666666666666666666666666666666665555555444443
No 152
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.06 E-value=1.1e-09 Score=106.01 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=102.1
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|++++...+.... ++.++|.+|..+|++++|+..++++++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------------~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLD---------------MYGQIGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH---------------HHHHHHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHH---------------HHHHHHHHHHHccCHHHHHHHHHHHhhcC
Confidence 344678999999999999999999999998776442 48899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
|.++.+++++|..++..+++++|+..|+++++++|++..+...+..+...+.
T Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 139 TTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 9999999999944555569999999999999999999877777777666554
No 153
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.05 E-value=1.2e-09 Score=109.81 Aligned_cols=110 Identities=26% Similarity=0.284 Sum_probs=100.6
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|++++...+... .+++++|.|+..+|++++|+..+++++.++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~---------------~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNY---------------IAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999866432 358899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC---CCHHHHHHHH
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP---DNRDVKLEYK 523 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P---~n~~~~~~l~ 523 (567)
|++..+++.+|.++..+|++++|+..|+++++++| ++..+...+.
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHH
Confidence 99999999999999999999999999999999999 8877776664
No 154
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.05 E-value=3e-09 Score=90.27 Aligned_cols=94 Identities=14% Similarity=0.089 Sum_probs=83.9
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
++++|.++++.|++++|+..++++++.+|+++.+|+.+|.++..+|++++|+..|++|++++|++..+...+..+....+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999988888877777
Q ss_pred HHHHHHHHHHHHhhH
Q 008400 531 EYNKKEAKFYGNMFA 545 (567)
Q Consensus 531 ~~~~~e~~~~~~~f~ 545 (567)
+..+.. ..|.+...
T Consensus 100 ~~~~A~-~~~~~al~ 113 (121)
T 1hxi_A 100 NANAAL-ASLRAWLL 113 (121)
T ss_dssp HHHHHH-HHHHHHHC
T ss_pred CHHHHH-HHHHHHHH
Confidence 665543 45555544
No 155
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.05 E-value=1.8e-09 Score=91.84 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=86.5
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
...+.++|.++++.|+|++|+..++++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..+...++.+..
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQI 83 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999988888888877
Q ss_pred HHHHHHHHHHHHHHHhhHhh
Q 008400 528 KMKEYNKKEAKFYGNMFAKM 547 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~~ 547 (567)
.+++..+. ...|.+.+...
T Consensus 84 ~~~~~~~A-~~~~~~al~~~ 102 (126)
T 3upv_A 84 AVKEYASA-LETLDAARTKD 102 (126)
T ss_dssp HTTCHHHH-HHHHHHHHHHH
T ss_pred HHhCHHHH-HHHHHHHHHhC
Confidence 77666543 34566655543
No 156
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.05 E-value=5.3e-10 Score=113.59 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=67.3
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
.+...|..++..|+|++|+..|++++...+.+. .+++++|.+|.++|++++|+..++++++++|+
T Consensus 215 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 279 (365)
T 4eqf_A 215 LQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDY---------------SLWNRLGATLANGDRSEEAVEAYTRALEIQPG 279 (365)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 445566666667777777777777766654322 23667777777777777777777777777777
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 514 (567)
++.+++++|.+|..+|++++|+..|+++++++|+
T Consensus 280 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 280 FIRSRYNLGISCINLGAYREAVSNFLTALSLQRK 313 (365)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 7777777777777777777777777777777666
No 157
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.04 E-value=1e-09 Score=104.01 Aligned_cols=80 Identities=19% Similarity=0.194 Sum_probs=72.7
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
..++.++|.++.++|++++|+..+++++..+|.+..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+..
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l~~ 238 (243)
T 2q7f_A 159 TEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLALHAKKLLGH 238 (243)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHHHHHHHHHHh
Confidence 34688999999999999999999999999999999999999999999999999999999999999999888877766644
No 158
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=9e-10 Score=116.88 Aligned_cols=106 Identities=30% Similarity=0.320 Sum_probs=98.7
Q ss_pred HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
+.+.+..+...|+.+++.|+|.+|+..|++++...+. ..+++++|.||.++|+|++|+..|+++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED----------------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC----------------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc----------------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 4677899999999999999999999999999998652 235889999999999999999999999
Q ss_pred hccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 475 LDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 475 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
++++|++..+++.+|.+|..+|++++|+..|+++++++|.+.
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 107 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFND 107 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCG
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999764
No 159
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.04 E-value=1.1e-09 Score=108.38 Aligned_cols=112 Identities=24% Similarity=0.263 Sum_probs=91.3
Q ss_pred HHhhhhhhhhHHHhc-CcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 398 AAGKKKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~-g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
.+..+.+.|..+... |+|++|+..|++|+.+.+..... .....++.++|.+|.++|+|++|+.+|++++.
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~---------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV---------ALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 356788899999996 99999999999999988754321 22345689999999999999999999999999
Q ss_pred cCCCCHH-------HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 008400 477 LDSRNVK-------ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDV 518 (567)
Q Consensus 477 ~~p~~~k-------a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~ 518 (567)
+.|.+.. +++++|.+|..+|++++|+..|+++++++|+....
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 9887642 78999999999999999999999999999997543
No 160
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.03 E-value=6.4e-10 Score=112.98 Aligned_cols=130 Identities=9% Similarity=0.017 Sum_probs=105.7
Q ss_pred hhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHH
Q 008400 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK 483 (567)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k 483 (567)
..|..+...|++++|+..|++++...+.... ..+++++|.+|.++|++++|+..++++++++|+++.
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~-------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 248 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQNGDMID-------------PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYS 248 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHHSCSSCC-------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhCcCccC-------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH
Confidence 3488899999999999999999998765221 234889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 008400 484 ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKM 547 (567)
Q Consensus 484 a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~ 547 (567)
+++++|.+|..+|++++|+..|+++++++|++..+...+..+...+++..++ ...|+++....
T Consensus 249 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A-~~~~~~al~~~ 311 (365)
T 4eqf_A 249 LWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREA-VSNFLTALSLQ 311 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHH-HHHHHHHHHhC
Confidence 9999999999999999999999999999999998888888887766655433 34566655543
No 161
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.03 E-value=1.9e-09 Score=103.18 Aligned_cols=128 Identities=17% Similarity=0.149 Sum_probs=99.7
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc--cC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD--LD 478 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~--~~ 478 (567)
.+...|..++..|++++|+..|.+++...+.. ..++.++|.+|..+|++++|+..+++++. .+
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~---------------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 137 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRN---------------ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLY 137 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc---------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccC
Confidence 45556666777777777777777777664432 23588999999999999999999999999 88
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f 544 (567)
|.+..+++.+|.++..+|++++|+..|+++++++|.+..+...+..+....++..++ ...|.++.
T Consensus 138 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~~~ 202 (252)
T 2ho1_A 138 PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPA-RQYYDLFA 202 (252)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH-HHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH-HHHHHHHH
Confidence 888999999999999999999999999999999999988877777776665544433 23444443
No 162
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.03 E-value=9.3e-10 Score=117.66 Aligned_cols=115 Identities=25% Similarity=0.361 Sum_probs=99.4
Q ss_pred ccCCChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHH
Q 008400 387 SWDMNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ 466 (567)
Q Consensus 387 ~~~~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~ 466 (567)
...++..++...+..+...|+.+++.|+|++|+..|++++...|.+. .+++++|.||.++|++++
T Consensus 13 ~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~---------------~~~~~la~~~~~~g~~~~ 77 (537)
T 3fp2_A 13 LKGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEP---------------VFYSNISACYISTGDLEK 77 (537)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHTCHHH
T ss_pred hcCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCCCc---------------HHHHHHHHHHHHcCCHHH
Confidence 44578888899999999999999999999999999999999876543 458999999999999999
Q ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 008400 467 AEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD 517 (567)
Q Consensus 467 Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~ 517 (567)
|+..|++++.++|+++.+++++|.+|..+|++++|+..|+ ++.++|++..
T Consensus 78 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~ 127 (537)
T 3fp2_A 78 VIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDG 127 (537)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-------
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCCh
Confidence 9999999999999999999999999999999999999996 8888888653
No 163
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.02 E-value=2.4e-09 Score=88.27 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=65.1
Q ss_pred HHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
..++++|.+++++|+|++|+..++++++++|+++.+++++|.+|..+|++++|+.+|+++++++|++
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 4588999999999999999999999999999999999999999999999999999999999999998
No 164
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.02 E-value=2.4e-09 Score=100.02 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=75.6
Q ss_pred HHHhhHHHHHHhc-cCHHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 449 ACNLNNAACKLKL-KDYKQAEKLCTKVLD--LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 449 ~~~~nla~~~~k~-~~~~~Ai~~~~~al~--~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
.++.++|.++..+ +++++|+..+++++. .+|.+..+++.+|.++..+|++++|+..|+++++.+|.+..+...+..+
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 77 EINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 3577888888888 899999999999888 5666688888899999999999999999999999988888777777777
Q ss_pred HHHHHHHHHHHHHHHHHhhHh
Q 008400 526 KEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 526 ~~~~~~~~~~e~~~~~~~f~~ 546 (567)
....++..+. ...|.++...
T Consensus 157 ~~~~~~~~~A-~~~~~~~~~~ 176 (225)
T 2vq2_A 157 KMLAGQLGDA-DYYFKKYQSR 176 (225)
T ss_dssp HHHHTCHHHH-HHHHHHHHHH
T ss_pred HHHcCCHHHH-HHHHHHHHHh
Confidence 6666555433 3355555543
No 165
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.02 E-value=2.9e-09 Score=99.41 Aligned_cols=118 Identities=18% Similarity=0.119 Sum_probs=88.8
Q ss_pred hhhhhhHHHhc-CcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 402 KKEQGNTLFKA-GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 402 ~~~~G~~~~~~-g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
+...|..++.. |++++|+..|++++. .+... ....++.++|.++.++|++++|+..++++++.+|.
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~~~~------------~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALA-DPTYP------------TPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHT-STTCS------------CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHc-CcCCc------------chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 34445555555 555555555555554 11111 12356889999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHH
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDP-DNRDVKLEYKTLKEKMKEY 532 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P-~n~~~~~~l~~~~~~~~~~ 532 (567)
+..+++.+|.++..+|++++|+..|+++++++| .+......+..+....+..
T Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (225)
T 2vq2_A 146 FPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNA 198 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCH
T ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcH
Confidence 999999999999999999999999999999999 8887776666555444433
No 166
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.01 E-value=4.1e-09 Score=83.50 Aligned_cols=80 Identities=33% Similarity=0.411 Sum_probs=74.0
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
..+++++|.++..+++|++|+..+++++..+|.+..+++++|.++..++++++|+..|+++++++|++..+...+..+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999888777766643
No 167
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.00 E-value=2.3e-09 Score=105.92 Aligned_cols=146 Identities=12% Similarity=0.029 Sum_probs=110.0
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc-
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL- 477 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~- 477 (567)
+..+...|..++..++|++|+..|++|+.+....... .....+++++|.+|..+|+|++|+.+++++++.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccH---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4455568888888899999999999999865443322 123456999999999999999999999999942
Q ss_pred ------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 478 ------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 478 ------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n------~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
.+....+++++|.+|..+|+|++|+..+++|+++.+.. ..+...++.+...+++..++....|++.+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Confidence 22336799999999999999999999999999987554 456666777766665332344556777666
Q ss_pred hhhhcccc
Q 008400 546 KMKSRAQG 553 (567)
Q Consensus 546 ~~~~~~~~ 553 (567)
-.....+.
T Consensus 266 i~~~~~~~ 273 (293)
T 3u3w_A 266 FFDILEMH 273 (293)
T ss_dssp HHHHTTCT
T ss_pred HHHHhCCH
Confidence 55544443
No 168
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.00 E-value=3.9e-09 Score=110.16 Aligned_cols=112 Identities=26% Similarity=0.270 Sum_probs=101.4
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..+++.|+|.+|+..|++++...+.+ ..+++++|.||.++|++++|+..++++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDN---------------YIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCcc---------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 457788999999999999999999999999876543 34588999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR---DVKLEYK 523 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~---~~~~~l~ 523 (567)
.+|++..+++.+|.+|..+|++++|+..|+++++++|++. .+...+.
T Consensus 89 ~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~ 138 (450)
T 2y4t_A 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLI 138 (450)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 9999999999999999999999999999999999999987 6655553
No 169
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.99 E-value=2.3e-09 Score=90.91 Aligned_cols=101 Identities=32% Similarity=0.416 Sum_probs=90.8
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS 479 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p 479 (567)
..+...|..++..|++++|+..|.+++...+.. ..+++++|.++...+++++|+..+++++...|
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---------------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCc---------------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 345667888999999999999999999875532 23478999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 480 RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 101 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 101 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999874
No 170
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.99 E-value=4e-09 Score=92.00 Aligned_cols=100 Identities=8% Similarity=0.016 Sum_probs=87.1
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
...++++|.++++.|+|++|+..+++++..+|+++.+|+.+|.+|..+|+|++|+.+|+++++++|++..+...+..+..
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 97 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHL 97 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHHHHHHHhhHhhh
Q 008400 528 KMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~~~ 548 (567)
.+++..+.. ..|.+......
T Consensus 98 ~~g~~~~A~-~~~~~al~~~p 117 (142)
T 2xcb_A 98 QLGDLDGAE-SGFYSARALAA 117 (142)
T ss_dssp HTTCHHHHH-HHHHHHHHHHH
T ss_pred HcCCHHHHH-HHHHHHHHhCC
Confidence 776665433 45666655443
No 171
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.99 E-value=6.3e-09 Score=105.31 Aligned_cols=148 Identities=9% Similarity=0.013 Sum_probs=115.2
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCCh----------------------------HHHHHHH------
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD----------------------------EEKKQAK------ 444 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~----------------------------e~~~~~~------ 444 (567)
+..+...|..++..|++++|+..|.+++...+....... +-....+
T Consensus 132 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 211 (368)
T 1fch_A 132 QTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLD 211 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhC
Confidence 345677788888888999999999888887664332110 0000000
Q ss_pred HH--HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008400 445 AL--KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (567)
Q Consensus 445 ~~--~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l 522 (567)
.. ...++.++|.+|.++|++++|+..+++++.++|+++.+++++|.++..+|++++|+..|+++++++|++..+...+
T Consensus 212 p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l 291 (368)
T 1fch_A 212 PTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNL 291 (368)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 01 3567889999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHhh
Q 008400 523 KTLKEKMKEYNKKEAKFYGNMFAKM 547 (567)
Q Consensus 523 ~~~~~~~~~~~~~e~~~~~~~f~~~ 547 (567)
..+....++..++ ...|.++....
T Consensus 292 ~~~~~~~g~~~~A-~~~~~~al~~~ 315 (368)
T 1fch_A 292 GISCINLGAHREA-VEHFLEALNMQ 315 (368)
T ss_dssp HHHHHHHTCHHHH-HHHHHHHHHHH
T ss_pred HHHHHHCCCHHHH-HHHHHHHHHhC
Confidence 8887776665543 34556655543
No 172
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.98 E-value=3.8e-09 Score=93.23 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=83.7
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC-------CHH-----HHHHHHHHHHhcCCHHHHHHHHHHHHHh----
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR-------NVK-----ALYRRAQAYIQMADLDLAEFDIKKALEI---- 511 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~-------~~k-----a~~~~a~a~~~l~~~~~A~~~~~~al~l---- 511 (567)
...+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 345789999999999999999999999999999 554 9999999999999999999999999999
Q ss_pred ---CCCCHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Q 008400 512 ---DPDNRDVK----LEYKTLKEKMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 512 ---~P~n~~~~----~~l~~~~~~~~~~~~~e~~~~~~~f~~~~ 548 (567)
+|++..++ ..++.+...+++..++. ..|++...-.+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl-~~y~kAlel~p 133 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAM-PEFKKVVEMIE 133 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHH-HHHHHHHhcCC
Confidence 99997777 66677766666666543 46666655433
No 173
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.98 E-value=2.2e-09 Score=106.45 Aligned_cols=134 Identities=18% Similarity=0.184 Sum_probs=110.7
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|++++|+..|.+++...+... .++.++|.++..+|++++|+..++++++.+
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDA---------------QLWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 34567788999999999999999999998865432 348899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD------------NRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~------------n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
|.+..+++.+|.+|..+|++++|+..|+++++++|+ +..+...+..+...+++..++ ...+++.+..
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~~~~~l~~ 315 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLV-ELTYAQNVEP 315 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHH-HHHTTCCSHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHH-HHHHHHHHHh
Confidence 999999999999999999999999999999999999 677777777776666555433 2344444444
Q ss_pred hh
Q 008400 547 MK 548 (567)
Q Consensus 547 ~~ 548 (567)
+.
T Consensus 316 ~~ 317 (327)
T 3cv0_A 316 FA 317 (327)
T ss_dssp HH
T ss_pred cc
Confidence 33
No 174
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=2.2e-09 Score=110.10 Aligned_cols=145 Identities=17% Similarity=0.091 Sum_probs=91.2
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCC-------------CChHHHHHH------HHHHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-------------FGDEEKKQA------KALKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~-------------~~~e~~~~~------~~~~~~~~~nla~~~~ 459 (567)
+..+...|..+...|++.+|+..|++++...+.... ..++-.... ......++.++|.+|.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 445566666777777777777777777665443210 001111100 0112345677788888
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKF 539 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~ 539 (567)
++|++++|+..++++++++|+++.+++++|.++..+|++++|+..|+++++++|.+..+...+..+....++..+. ...
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A-~~~ 327 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA-VRL 327 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH-HHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHH-HHH
Confidence 8888888888888888888888888888888888888888888888888888887777666666665544444332 234
Q ss_pred HHHhh
Q 008400 540 YGNMF 544 (567)
Q Consensus 540 ~~~~f 544 (567)
|.++.
T Consensus 328 ~~~al 332 (388)
T 1w3b_A 328 YRKAL 332 (388)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 44443
No 175
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.98 E-value=4.4e-09 Score=94.04 Aligned_cols=99 Identities=20% Similarity=0.214 Sum_probs=86.3
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
....++++|.++++.++|++|+..|+++++++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..+...+..+.
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 89 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999998888888887
Q ss_pred HHHHHHHHHHHHHHHHhhHh
Q 008400 527 EKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 527 ~~~~~~~~~e~~~~~~~f~~ 546 (567)
..+++..+.. ..|.+.+..
T Consensus 90 ~~~g~~~~A~-~~~~~al~~ 108 (164)
T 3sz7_A 90 FDMADYKGAK-EAYEKGIEA 108 (164)
T ss_dssp HHTTCHHHHH-HHHHHHHHH
T ss_pred HHccCHHHHH-HHHHHHHHh
Confidence 7776655433 455555544
No 176
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.98 E-value=6.6e-09 Score=103.13 Aligned_cols=145 Identities=9% Similarity=-0.011 Sum_probs=93.4
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCCh-------------HHHHHHH------HHHHHHHhhHHHHHHh
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD-------------EEKKQAK------ALKVACNLNNAACKLK 460 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~-------------e~~~~~~------~~~~~~~~nla~~~~k 460 (567)
..+...|..++..|+|++|+..|++++...+....... +-..... .....+++++|.++..
T Consensus 23 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 102 (330)
T 3hym_B 23 DVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLM 102 (330)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 34566777888888888888888888877665543310 0000000 0113356777777777
Q ss_pred cc-CHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 461 LK-DYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKF 539 (567)
Q Consensus 461 ~~-~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~ 539 (567)
++ ++++|+..+++++.++|.+..+++.+|.++..+|++++|+..|++++++.|++..+...+..+....++..+. ...
T Consensus 103 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A-~~~ 181 (330)
T 3hym_B 103 VGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLA-ERF 181 (330)
T ss_dssp SCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHH-HHH
T ss_pred hhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHH-HHH
Confidence 77 7777777777777777777777777777777777777777777777777777766666666665554444332 234
Q ss_pred HHHhhH
Q 008400 540 YGNMFA 545 (567)
Q Consensus 540 ~~~~f~ 545 (567)
|.+.+.
T Consensus 182 ~~~al~ 187 (330)
T 3hym_B 182 FSQALS 187 (330)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 444443
No 177
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.97 E-value=2.8e-09 Score=109.32 Aligned_cols=146 Identities=15% Similarity=0.104 Sum_probs=103.3
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------------ChHHHHHH------HHHHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------------GDEEKKQA------KALKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------------~~e~~~~~------~~~~~~~~~nla~~~~ 459 (567)
...+...|..+...|++++|+..|.+++...+..... .++-.... ......++.++|.++.
T Consensus 135 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 214 (388)
T 1w3b_A 135 YCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLK 214 (388)
T ss_dssp THHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 4456788999999999999999999999886643211 00001111 1112446778888888
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKF 539 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~ 539 (567)
..+++++|+..+.+++.++|+++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+....++..+. ...
T Consensus 215 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A-~~~ 293 (388)
T 1w3b_A 215 EARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEA-EDC 293 (388)
T ss_dssp TTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHH-HHH
T ss_pred HcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH-HHH
Confidence 8888888888888888888888888888888888888888888888888888888877777777665555544432 234
Q ss_pred HHHhhH
Q 008400 540 YGNMFA 545 (567)
Q Consensus 540 ~~~~f~ 545 (567)
|.++..
T Consensus 294 ~~~al~ 299 (388)
T 1w3b_A 294 YNTALR 299 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444443
No 178
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.97 E-value=4e-09 Score=102.01 Aligned_cols=142 Identities=22% Similarity=0.236 Sum_probs=113.3
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|.+++.......... ......++.++|.+|..+|++++|+.++.+++.
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 113 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 113 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 4567788999999999999999999999998864321100 134566799999999999999999999999998
Q ss_pred c--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 477 L--------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--------DPDNRDVKLEYKTLKEKMKEYNKKEAKFY 540 (567)
Q Consensus 477 ~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--------~P~n~~~~~~l~~~~~~~~~~~~~e~~~~ 540 (567)
+ +|....+++++|.+|..+|++++|+..|++++++ +|....+...+..+....++..++ ...|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~ 192 (283)
T 3edt_B 114 IREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDA-ETLY 192 (283)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHH-HHHH
T ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHH-HHHH
Confidence 8 5677899999999999999999999999999999 666666677777776666555433 3455
Q ss_pred HHhhHh
Q 008400 541 GNMFAK 546 (567)
Q Consensus 541 ~~~f~~ 546 (567)
.++...
T Consensus 193 ~~~l~~ 198 (283)
T 3edt_B 193 KEILTR 198 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 179
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.96 E-value=7.9e-09 Score=90.64 Aligned_cols=109 Identities=19% Similarity=0.152 Sum_probs=93.8
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+...|..++..|+|++|+..|.+++.+.+.... ......++.++|.++..+|++++|+.++++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCC---------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456778899999999999999999999999998765332 13345678999999999999999999999999
Q ss_pred ccCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008400 476 DLDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (567)
Q Consensus 476 ~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 513 (567)
.+.+.. ..+++++|.++..+|++++|+..+++++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 875543 67899999999999999999999999998843
No 180
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.95 E-value=4.3e-09 Score=104.46 Aligned_cols=133 Identities=17% Similarity=0.086 Sum_probs=112.3
Q ss_pred HhhhhhhhhHHHhcC-cHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 399 AGKKKEQGNTLFKAG-KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 399 a~~~~~~G~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
+..+...|..++..| ++++|+..|.+++...+... .++.++|.++..+|++++|+..++++++.
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 154 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYG---------------PAWIAYGHSFAVESEHDQAMAAYFTAAQL 154 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCT---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccH---------------HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 345677888889999 89999999999998766543 23889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKM 547 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~ 547 (567)
.|.+..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+....++..+.. ..|.++....
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~-~~~~~a~~~~ 223 (330)
T 3hym_B 155 MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAE-KWFLDALEKI 223 (330)
T ss_dssp TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHH-HHHHHHHHHh
Confidence 99999999999999999999999999999999999999888888888776666555433 4555555543
No 181
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.93 E-value=5.5e-09 Score=85.26 Aligned_cols=68 Identities=18% Similarity=0.186 Sum_probs=64.1
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
..+++++|.+|+++|+|++|+..++++++++|+++.+|+++|.+|..+|++++|+..|++++++.|.+
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 34588999999999999999999999999999999999999999999999999999999999997653
No 182
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.93 E-value=3.9e-09 Score=102.09 Aligned_cols=128 Identities=11% Similarity=-0.029 Sum_probs=105.0
Q ss_pred hhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHH
Q 008400 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKAL 485 (567)
Q Consensus 406 G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~ 485 (567)
+..+...++|++|+..|++++...+.. ......+++++|.++..+|++++|+..+++++.++|.++.++
T Consensus 12 ~~~~~~~~~~~~A~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 80 (275)
T 1xnf_A 12 AVPLQPTLQQEVILARMEQILASRALT-----------DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVF 80 (275)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTSSCCC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHH
T ss_pred eeccCccchHHHHHHHHHHHHhccccc-----------CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHH
Confidence 344556789999999999999863211 123456689999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 486 YRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 486 ~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
+++|.+|..+|++++|+..|+++++++|.+..+...+..+....++..+. ...|.+++.
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~ 139 (275)
T 1xnf_A 81 NYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLA-QDDLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHH-HHHHHHHHH
Confidence 99999999999999999999999999999988888888876666555432 345555544
No 183
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.92 E-value=1.3e-08 Score=107.73 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=112.1
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHH
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCT 472 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~ 472 (567)
.+.+..+....+.+..+..+|+|++|+..|+++|.......... +......+.|+|.+|..+|+|++|+.++.
T Consensus 303 ~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 375 (490)
T 3n71_A 303 KEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYAR 375 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 45566777788888888899999999999999999866433221 24466779999999999999999999999
Q ss_pred HHhcc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHH---HHHHHHHHHHHHHH
Q 008400 473 KVLDL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEI-----DPDNRDVKLEY---KTLKEKMKEYNKKE 536 (567)
Q Consensus 473 ~al~~-----~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~P~n~~~~~~l---~~~~~~~~~~~~~e 536 (567)
++|.+ -|++ ...++++|.+|..+|+|++|+..|++|+++ -|+++.....+ ..+...++.+++++
T Consensus 376 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae 455 (490)
T 3n71_A 376 RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNE 455 (490)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99875 3444 578999999999999999999999999976 57777655544 44444455555444
Q ss_pred HHHHHHhhHh
Q 008400 537 AKFYGNMFAK 546 (567)
Q Consensus 537 ~~~~~~~f~~ 546 (567)
.+|+++-..
T Consensus 456 -~~~~~~~~~ 464 (490)
T 3n71_A 456 -FMYHKMREA 464 (490)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 355555443
No 184
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.91 E-value=5.3e-09 Score=103.36 Aligned_cols=97 Identities=13% Similarity=0.067 Sum_probs=86.6
Q ss_pred HhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHH
Q 008400 410 FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRA 489 (567)
Q Consensus 410 ~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a 489 (567)
...|++++|+..|++++...|.+. .+++++|.|+.++|+|++|+..++++++++|+++.+++++|
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~~~---------------~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~ 241 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSPTL---------------LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLV 241 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCCCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCCcH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345899999999999999866433 34889999999999999999999999999999999999999
Q ss_pred HHHHhcCCHHH-HHHHHHHHHHhCCCCHHHHHH
Q 008400 490 QAYIQMADLDL-AEFDIKKALEIDPDNRDVKLE 521 (567)
Q Consensus 490 ~a~~~l~~~~~-A~~~~~~al~l~P~n~~~~~~ 521 (567)
.++..+|++++ |...++++++++|++..+...
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 99999999976 568999999999999876543
No 185
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.90 E-value=6.2e-09 Score=109.52 Aligned_cols=125 Identities=15% Similarity=0.059 Sum_probs=98.3
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|++.|++|+++.+..... ........+|.|+|.+|..+|+|++|+.++++++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999986542210 0001124458899999999999999999999998763
Q ss_pred --------CCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 479 --------SRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 479 --------p~~~ka~~~~a~a~~~l~--~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
+..+.++.++|.++..++ +|++|+.+|++|++++|++.++...+..+...+
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 456788999998887754 699999999999999999988877776654443
No 186
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.89 E-value=6.7e-09 Score=103.37 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=87.1
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+.+.|..+.. |+|++|+..|++|+.+.+.... ......++.|+|.+|.++|+|++|+.+|++++.+
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEER---------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCC---------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45666777888777 8888888888888887664321 1234567899999999999999999999999988
Q ss_pred CCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 478 DSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 478 ~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
.|.+ ..+++++|.+++.+|++++|+..|++++ ++|...
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 6543 3588899999999999999999999999 999754
No 187
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.89 E-value=8.9e-09 Score=101.61 Aligned_cols=107 Identities=16% Similarity=0.138 Sum_probs=92.0
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|++|+......... ......+++|+|.+|.++|+|++|+.++++++++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccc--------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45568899999999999999999999999877654221 2456668999999999999999999999999987
Q ss_pred CCCC------HHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhC
Q 008400 478 DSRN------VKALYRRAQAYIQMA-DLDLAEFDIKKALEID 512 (567)
Q Consensus 478 ~p~~------~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~ 512 (567)
.+.. ..+|+++|.+|..+| .+++|+.+|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 6443 789999999999999 5799999999999763
No 188
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.89 E-value=8.1e-10 Score=89.63 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=57.8
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK-ALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVK 519 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k-a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~ 519 (567)
.+++|.++++.++|++|+..|+++++.+|+++. +++++|.+|..+|++++|+.+|+++++++|++..+.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 357788888888888888888888888888888 888888888888888888888888888888886655
No 189
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.88 E-value=1.7e-08 Score=86.70 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=87.7
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
...++++|.++++.++|++|+..+.+++.++|+++.+++++|.++..++++++|+.+|+++++++|++..+...+..+..
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 88 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 88 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999988888888877
Q ss_pred HHHHHHHHHHHHHHHhhHhhhh
Q 008400 528 KMKEYNKKEAKFYGNMFAKMKS 549 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~~~~ 549 (567)
.+++..+. ...|++.+.....
T Consensus 89 ~~~~~~~A-~~~~~~a~~~~p~ 109 (137)
T 3q49_B 89 EMESYDEA-IANLQRAYSLAKE 109 (137)
T ss_dssp HTTCHHHH-HHHHHHHHHHHHH
T ss_pred HHhhHHHH-HHHHHHHHHHChh
Confidence 77666543 3466666654433
No 190
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.88 E-value=1.1e-08 Score=82.89 Aligned_cols=60 Identities=12% Similarity=-0.017 Sum_probs=54.0
Q ss_pred HH-HHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 448 VA-CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 448 ~~-~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
.. +++++|.||.+++++++|+.+++++++++|++..++++ +.+.+|+..|++++.++|++
T Consensus 34 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 34 KDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 45 89999999999999999999999999999999998865 67788999999999888876
No 191
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.87 E-value=2.8e-08 Score=98.02 Aligned_cols=136 Identities=14% Similarity=0.055 Sum_probs=98.5
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh---cc
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL---DL 477 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al---~~ 477 (567)
.+...|..+...|+|++|+..|.+|+......... .....+++++|.+|..+++|++|+.++++++ +.
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~ 187 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA 187 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 34456777777788888888888888765443222 1135578999999999999999999999999 44
Q ss_pred CCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 478 DSRN----VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 478 ~p~~----~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n------~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
.|++ ..+++++|.+|..+|+|++|+..|++|+++.++. ..+...++.+...+++.+++-...|++...
T Consensus 188 ~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~ 265 (293)
T 2qfc_A 188 LHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASF 265 (293)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 5554 2799999999999999999999999999986431 345555666665555544442334554443
No 192
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.87 E-value=2.1e-08 Score=102.76 Aligned_cols=129 Identities=14% Similarity=0.111 Sum_probs=95.0
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|.+|+..|.+|+.+.+..... ......+++++|.+|..+|+|++|+.++++++.
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY--------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYS 212 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc--------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456777888888888888888888888888887655431 123456788888888888888888888888887
Q ss_pred cCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----C-CCCHHHHHHHHHHHHHHHHHH
Q 008400 477 LDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEI-----D-PDNRDVKLEYKTLKEKMKEYN 533 (567)
Q Consensus 477 ~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~-P~n~~~~~~l~~~~~~~~~~~ 533 (567)
+.+.. ..+++++|.+|..+|++++|+.+|++|+++ + |....+...++.+...+++..
T Consensus 213 ~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 281 (383)
T 3ulq_A 213 MAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKID 281 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHH
Confidence 75432 358888888888888888888888888884 4 555555555666555544433
No 193
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.87 E-value=1.6e-08 Score=107.22 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=97.6
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh---ccCHHHHHHHHHHHhcc
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK---LKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k---~~~~~~Ai~~~~~al~~ 477 (567)
.+...|..++..|++++|+..|.+++...+...... ....+++++|.++.+ +|++++|+..+++++..
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIY---------VGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL 444 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCS---------SCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHH---------HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh
Confidence 455667777888888888888888887766554310 001258899999999 99999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
+|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+.
T Consensus 445 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 445 DPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAE 493 (514)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988877765543
No 194
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.86 E-value=5.5e-09 Score=113.35 Aligned_cols=119 Identities=17% Similarity=0.105 Sum_probs=85.8
Q ss_pred cCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH
Q 008400 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (567)
Q Consensus 412 ~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a 491 (567)
.|++++|+..|+++++..+.+. .+++++|.+|..+|+|++|+..++++++++|++..+++++|.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~---------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 66 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDF---------------VAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRV 66 (568)
T ss_dssp -------------------CCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4789999999999998766433 3489999999999999999999999999999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 492 YIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 492 ~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
|..+|++++|+..|+++++++|++..+...+..+....++..++ .+.|++.+..
T Consensus 67 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~~ 120 (568)
T 2vsy_A 67 RWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAA-AAAYTRAHQL 120 (568)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHh
Confidence 99999999999999999999999998888888887776655543 3455555443
No 195
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.86 E-value=1.4e-08 Score=103.88 Aligned_cols=109 Identities=14% Similarity=-0.009 Sum_probs=96.9
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|.+|+.+.+.... ......++.|+|.||..+|++++|+.++++++.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN---------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46777889999999999999999999999998754322 134566799999999999999999999999999
Q ss_pred -----cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008400 477 -----LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (567)
Q Consensus 477 -----~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 514 (567)
.+|....+++++|.+|..+|++++|+..+++++++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999999654
No 196
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.85 E-value=1.2e-08 Score=104.45 Aligned_cols=109 Identities=16% Similarity=0.140 Sum_probs=96.3
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+...|..+...|+|++|+..|.+|+.+.+.... ......+++|+|.||..+|++++|+.++++++
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQ---------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 445677889999999999999999999999998775432 23456679999999999999999999999999
Q ss_pred c-----cC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008400 476 D-----LD-SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (567)
Q Consensus 476 ~-----~~-p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 513 (567)
+ .+ |....+++++|.+|..+|++++|+..|++|+++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 252 AVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9 56 77899999999999999999999999999999853
No 197
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.85 E-value=5.1e-09 Score=108.62 Aligned_cols=85 Identities=15% Similarity=0.268 Sum_probs=76.2
Q ss_pred cCCCCCCeEEEEEEEEeCCCeEeeec--cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCC
Q 008400 167 ENPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGA 244 (567)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ 244 (567)
..+..||.|+++|.+.. +|+.|+++ .++.|.+|.|.++|||+++|.||+.|+++.|.+|+..+||..+.
T Consensus 156 ~~~~~gD~V~i~y~g~~-dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l-------- 226 (432)
T 1w26_A 156 GAVEAEDRVTIDFTGSV-DGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL-------- 226 (432)
T ss_dssp SCCCTTCEEEECEEEES-SSCBCSSCCCSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT--------
T ss_pred CCCCCCCEEEEEEEEee-CCeEccCCCccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC--------
Confidence 35789999999999995 99999976 89999999999999999999999999999999999999996543
Q ss_pred CCCCCeEEEEEEeecccc
Q 008400 245 VPPNATLQIALELVSWKT 262 (567)
Q Consensus 245 ip~~~~l~~~v~l~~~~~ 262 (567)
++.+++|+|+|.++..
T Consensus 227 --ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 227 --KGKAAKFAINLKKVEE 242 (432)
T ss_dssp --SSCEEEEEEECCEECC
T ss_pred --CCceEEEEEEEEEEec
Confidence 6789999999998753
No 198
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.85 E-value=1.1e-08 Score=109.25 Aligned_cols=153 Identities=14% Similarity=0.048 Sum_probs=116.1
Q ss_pred HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhcc------------CCCChHHHHHHHH------HHHHHHhhHHH
Q 008400 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD------------TSFGDEEKKQAKA------LKVACNLNNAA 456 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~------------~~~~~e~~~~~~~------~~~~~~~nla~ 456 (567)
....+..+...|..++..|++++|+..|.+++...+.. ....++-....+. ....++.++|.
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 318 (537)
T 3fp2_A 239 RENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQ 318 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 34557778888888888888888888888888765530 0001111111111 12457889999
Q ss_pred HHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008400 457 CKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (567)
Q Consensus 457 ~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e 536 (567)
++..+|++++|+..+++++.++|++..+++.+|.+|..+|++++|+..|+++++++|++..+...+..+....++..++
T Consensus 319 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A- 397 (537)
T 3fp2_A 319 MYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTA- 397 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH-
T ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999999988888888887666655433
Q ss_pred HHHHHHhhHhhh
Q 008400 537 AKFYGNMFAKMK 548 (567)
Q Consensus 537 ~~~~~~~f~~~~ 548 (567)
...|.++.....
T Consensus 398 ~~~~~~a~~~~~ 409 (537)
T 3fp2_A 398 IKQYDIAKRLEE 409 (537)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC
Confidence 346666655443
No 199
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.84 E-value=9.7e-09 Score=102.18 Aligned_cols=109 Identities=13% Similarity=0.056 Sum_probs=91.3
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+.+.|..+...|+|++|+..|++|+.+....... .....++.|+|.+|.. +++++|+.+|++++.
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~---------~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTP---------DTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCH---------HHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 346677788888888899999999999999886543321 2345678999999999 999999999999999
Q ss_pred cCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 477 LDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 477 ~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
+.+.. ..+++++|.+|..+|+|++|+..|++++++.|++
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 87643 6789999999999999999999999999997655
No 200
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.83 E-value=4.8e-08 Score=96.70 Aligned_cols=147 Identities=12% Similarity=0.039 Sum_probs=114.5
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCC------------------------hHHHHH----HHH-----
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG------------------------DEEKKQ----AKA----- 445 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~------------------------~e~~~~----~~~----- 445 (567)
...+...|..++..|++++|+..|.+++...+...... .....+ .+.
T Consensus 89 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 168 (327)
T 3cv0_A 89 IAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMN 168 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhC
Confidence 34567788899999999999999999998765432211 001111 111
Q ss_pred -HHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008400 446 -LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (567)
Q Consensus 446 -~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~ 524 (567)
....++.++|.++.++|++++|+..+++++..+|++..+++.+|.++..+|++++|+..|+++++++|++..+...+..
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 1245788999999999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHhhHh
Q 008400 525 LKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 525 ~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
+....++..++ .+.|.++...
T Consensus 249 ~~~~~g~~~~A-~~~~~~a~~~ 269 (327)
T 3cv0_A 249 SYSNMSQYDLA-AKQLVRAIYM 269 (327)
T ss_dssp HHHHTTCHHHH-HHHHHHHHHH
T ss_pred HHHHhccHHHH-HHHHHHHHHh
Confidence 77666555433 3455555544
No 201
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.83 E-value=1.1e-08 Score=80.98 Aligned_cols=84 Identities=26% Similarity=0.315 Sum_probs=75.2
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|++++...+... .+++++|.++.+++++++|+..+++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~---------------~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---------------EAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH---------------HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 456778899999999999999999999998865432 34889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhcC
Q 008400 478 DSRNVKALYRRAQAYIQMA 496 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~ 496 (567)
+|++..+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999998764
No 202
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.82 E-value=1.4e-08 Score=90.58 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=84.1
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhcc------------------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDL------------------DSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~------------------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 509 (567)
...+.++|.++++.|+|++|+..|.+++.+ +|.+..+|+++|.||+.+|+|++|+.++++|+
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 445789999999999999999999999999 77788999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 510 EIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 510 ~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
+++|++..+...++.+...+++..++. ..|.+.+..
T Consensus 91 ~~~p~~~~a~~~~g~~~~~~g~~~~A~-~~~~~al~l 126 (162)
T 3rkv_A 91 KREETNEKALFRRAKARIAAWKLDEAE-EDLKLLLRN 126 (162)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred hcCCcchHHHHHHHHHHHHHhcHHHHH-HHHHHHHhc
Confidence 999999888888888877776665443 355555544
No 203
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.82 E-value=1.2e-08 Score=83.59 Aligned_cols=95 Identities=13% Similarity=0.067 Sum_probs=81.8
Q ss_pred HHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHH
Q 008400 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD--NRDVKLEYKTLKE 527 (567)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--n~~~~~~l~~~~~ 527 (567)
+++++|.++...+++++|+..++++++++|.+..+++++|.++..+|++++|+.+|+++++++|. +..+...+..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~ 87 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR 87 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999 9888888877766
Q ss_pred HH-HHHHHHHHHHHHHhhH
Q 008400 528 KM-KEYNKKEAKFYGNMFA 545 (567)
Q Consensus 528 ~~-~~~~~~e~~~~~~~f~ 545 (567)
.+ ++..+ ..+.+.+...
T Consensus 88 ~~~~~~~~-A~~~~~~~~~ 105 (112)
T 2kck_A 88 YIEGKEVE-AEIAEARAKL 105 (112)
T ss_dssp TCSSCSHH-HHHHHHHHGG
T ss_pred HHhCCHHH-HHHHHHHHhh
Confidence 65 54443 3344554443
No 204
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.80 E-value=2.9e-08 Score=84.25 Aligned_cols=98 Identities=19% Similarity=0.213 Sum_probs=84.2
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNV---KALYRRAQAYIQMADLDLAEFDIKKALEIDPDN---RDVKLEYKT 524 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~---ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n---~~~~~~l~~ 524 (567)
++++|.++++.|+|++|+..+++++..+|++. .+++++|.++..+|+|++|+..|+++++.+|++ ..+...+..
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHH
Confidence 67899999999999999999999999999998 899999999999999999999999999999999 777788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhhhh
Q 008400 525 LKEKMKEYNKKEAKFYGNMFAKMKS 549 (567)
Q Consensus 525 ~~~~~~~~~~~e~~~~~~~f~~~~~ 549 (567)
+...+++..+. ...|.++....+.
T Consensus 85 ~~~~~g~~~~A-~~~~~~~~~~~p~ 108 (129)
T 2xev_A 85 SQYGEGKNTEA-QQTLQQVATQYPG 108 (129)
T ss_dssp HHHHTTCHHHH-HHHHHHHHHHSTT
T ss_pred HHHHcCCHHHH-HHHHHHHHHHCCC
Confidence 77766655443 3466666665443
No 205
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.79 E-value=1.6e-08 Score=88.00 Aligned_cols=102 Identities=15% Similarity=0.205 Sum_probs=83.9
Q ss_pred cHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc---CHHHHHHHHHHHhccC-C-CCHHHHHHH
Q 008400 414 KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK---DYKQAEKLCTKVLDLD-S-RNVKALYRR 488 (567)
Q Consensus 414 ~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~---~~~~Ai~~~~~al~~~-p-~~~ka~~~~ 488 (567)
....+.+.|.+++...+. ...+.+++|.|+.+.+ +.++++..++.+++.+ | .+..++|++
T Consensus 13 ~l~~~~~~y~~e~~~~~~---------------~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~L 77 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSV---------------SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 77 (152)
T ss_dssp HHHHHHHHHHHHHHTTCC---------------CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCC---------------cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHH
Confidence 345566777777653221 1244789999999988 7779999999999998 7 679999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 489 AQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 489 a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
|.+|+++++|++|+.+++++|+++|+|..+..+...+..++.
T Consensus 78 Av~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~ 119 (152)
T 1pc2_A 78 AVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 119 (152)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988888777766553
No 206
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.78 E-value=3.7e-08 Score=90.55 Aligned_cols=141 Identities=11% Similarity=0.077 Sum_probs=105.0
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|.+++.+...... ......++.++|.+|..+|++++|+.++.+++.+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4667888999999999999999999999998765432 1345667999999999999999999999999987
Q ss_pred ---CC----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHH----HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008400 478 ---DS----RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD--NRD----VKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 478 ---~p----~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--n~~----~~~~l~~~~~~~~~~~~~e~~~~~~~f 544 (567)
.+ ....+++++|.++..+|++++|+..+++++++.+. +.. +...+..+....++..+ ....+.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~al 174 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLE-AQQHWLRAR 174 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHH-HHHHHHHHH
Confidence 33 23578999999999999999999999999987432 221 12344444444444333 233455555
Q ss_pred Hhhh
Q 008400 545 AKMK 548 (567)
Q Consensus 545 ~~~~ 548 (567)
....
T Consensus 175 ~~~~ 178 (203)
T 3gw4_A 175 DIFA 178 (203)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 207
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.78 E-value=5e-08 Score=99.84 Aligned_cols=143 Identities=15% Similarity=0.072 Sum_probs=107.2
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+...|..++..|++..|+..|.+|+.+.+..... ......+++++|.+|..+|+|++|+.++.+++
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3455666777777777777777777777777776644322 12356789999999999999999999999999
Q ss_pred ccCC------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008400 476 DLDS------RNVKALYRRAQAYIQMADLDLAEFDIKKALE-----IDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 476 ~~~p------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~-----l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f 544 (567)
++.+ ....+++++|.+|..+|++++|+..|++|++ .+|....+...++.+...+++..++ ...+.+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~al 288 (378)
T 3q15_A 210 ELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKA-FQFIEEGL 288 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHH-HHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHH-HHHHHHHH
Confidence 8643 1257899999999999999999999999999 6777766666777776666555433 34555555
Q ss_pred Hhh
Q 008400 545 AKM 547 (567)
Q Consensus 545 ~~~ 547 (567)
...
T Consensus 289 ~~~ 291 (378)
T 3q15_A 289 DHI 291 (378)
T ss_dssp HHC
T ss_pred HHH
Confidence 543
No 208
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.78 E-value=5.8e-08 Score=80.22 Aligned_cols=97 Identities=18% Similarity=0.176 Sum_probs=83.4
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
...++++|.++...++|++|+..+++++..+|.++.+++++|.++..++++++|+..++++++++|++..+...+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999999999888888888776
Q ss_pred HHHHHHHHHHHHHHHhhH
Q 008400 528 KMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~ 545 (567)
..++..+. ...|.+...
T Consensus 84 ~~~~~~~A-~~~~~~~~~ 100 (118)
T 1elw_A 84 FLNRFEEA-KRTYEEGLK 100 (118)
T ss_dssp HTTCHHHH-HHHHHHHHT
T ss_pred HHhhHHHH-HHHHHHHHH
Confidence 66555433 334555544
No 209
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.78 E-value=3.5e-08 Score=95.23 Aligned_cols=109 Identities=18% Similarity=0.058 Sum_probs=93.6
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+...|..++..|+|++|+..|.+++.......... ......++.++|.+|..+|++++|+.++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34567788999999999999999999999998854321110 13356679999999999999999999999999
Q ss_pred cc--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 476 DL--------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 476 ~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
.+ +|....+++++|.+|..+|++++|+..|++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 98 7777899999999999999999999999999987
No 210
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.78 E-value=2.8e-08 Score=98.02 Aligned_cols=107 Identities=16% Similarity=0.138 Sum_probs=90.2
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|++|+.+....... ......+++|+|.+|.++|+|++|+.++++++.+
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~--------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN--------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc--------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46678899999999999999999999999876544322 1223367999999999999999999999999987
Q ss_pred CCC------CHHHHHHHHHHHHhcCCHHHH-HHHHHHHHHhC
Q 008400 478 DSR------NVKALYRRAQAYIQMADLDLA-EFDIKKALEID 512 (567)
Q Consensus 478 ~p~------~~ka~~~~a~a~~~l~~~~~A-~~~~~~al~l~ 512 (567)
.+. ...+++++|.+|..+|++++| ...|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 542 278999999999999999999 78899999763
No 211
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.78 E-value=4.2e-08 Score=85.89 Aligned_cols=108 Identities=21% Similarity=0.232 Sum_probs=91.9
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|.+++.+.+..... .....++.++|.++..++++++|+.++++++.+
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR---------AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc---------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34577889999999999999999999999987654321 334667899999999999999999999999876
Q ss_pred CCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008400 478 DSR------NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (567)
Q Consensus 478 ~p~------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 514 (567)
.+. ...+++++|.+|..+|++++|+..+++++++...
T Consensus 119 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 119 AQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 322 2578999999999999999999999999987654
No 212
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.77 E-value=4.5e-08 Score=100.75 Aligned_cols=125 Identities=14% Similarity=0.083 Sum_probs=104.4
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+...|..++..|+|++|+..|++++...+.+. .....+++++|.+|..+|++++|+.++++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 113 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDL-----------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDL 113 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccCh-----------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45677888999999999999999999999999854321 2345578999999999999999999999999
Q ss_pred cc------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHH
Q 008400 476 DL------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI------DPDNRDVKLEYKTLKEKMKE 531 (567)
Q Consensus 476 ~~------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l------~P~n~~~~~~l~~~~~~~~~ 531 (567)
.+ ++....+++++|.+|..+|++++|+..|++++++ .|....+...+..+....++
T Consensus 114 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 114 TLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 88 5677899999999999999999999999999998 44444556666666655555
No 213
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.77 E-value=5.8e-08 Score=82.34 Aligned_cols=98 Identities=21% Similarity=0.287 Sum_probs=85.0
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
...++++|.++...++|++|+..+++++..+|.+..+++++|.+|..++++++|+.+|+++++++|.+..+...+..+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 95 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE 95 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 45588999999999999999999999999999999999999999999999999999999999999999888888888877
Q ss_pred HHHHHHHHHHHHHHHhhHh
Q 008400 528 KMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~ 546 (567)
..++..++ .+.|.+....
T Consensus 96 ~~~~~~~A-~~~~~~~~~~ 113 (133)
T 2lni_A 96 AMKDYTKA-MDVYQKALDL 113 (133)
T ss_dssp HTTCHHHH-HHHHHHHHHH
T ss_pred HHhhHHHH-HHHHHHHHHh
Confidence 66655543 3455555543
No 214
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.76 E-value=4.4e-08 Score=96.18 Aligned_cols=142 Identities=21% Similarity=0.230 Sum_probs=110.6
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|.+++.......... ......++.++|.+|..+|++++|+.++.+++.
T Consensus 67 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 139 (311)
T 3nf1_A 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 139 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC-------ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 3456778899999999999999999999998864321000 133556789999999999999999999999998
Q ss_pred cC--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 477 LD--------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--------DPDNRDVKLEYKTLKEKMKEYNKKEAKFY 540 (567)
Q Consensus 477 ~~--------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--------~P~n~~~~~~l~~~~~~~~~~~~~e~~~~ 540 (567)
+. |....+++++|.++..+|++++|+..|++++++ .|....+...+..+....++..++ ...|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~ 218 (311)
T 3nf1_A 140 IREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA-ETLY 218 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHH-HHHH
T ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHH-HHHH
Confidence 74 556789999999999999999999999999998 555555666667666666555443 3455
Q ss_pred HHhhHh
Q 008400 541 GNMFAK 546 (567)
Q Consensus 541 ~~~f~~ 546 (567)
.++...
T Consensus 219 ~~al~~ 224 (311)
T 3nf1_A 219 KEILTR 224 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 215
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.76 E-value=5.2e-08 Score=105.62 Aligned_cols=133 Identities=11% Similarity=-0.025 Sum_probs=108.5
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..+++.|++++|++.|++++...+.+ ..++++++.+|.+.|++++|+..+++++..+
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQF---------------GPAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 3445667788888888888888888888765432 2348899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhh
Q 008400 479 SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKM 547 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~ 547 (567)
|++..+++.+|.+|...|++++|+..|+++++++|.+..+...+..+..+.++.+++ .+.|.++....
T Consensus 438 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~~~~~~~~~ 505 (597)
T 2xpi_A 438 QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTA-INHFQNALLLV 505 (597)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH-HHHHHHHHHhh
Confidence 999999999999999999999999999999999999988888887776666555443 34666666553
No 216
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.74 E-value=8.3e-08 Score=94.20 Aligned_cols=109 Identities=19% Similarity=0.125 Sum_probs=92.1
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|.+++.+........ ......++.++|.++..+|++++|+.++++++.
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-------HPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4466788899999999999999999999998763320000 123456789999999999999999999999999
Q ss_pred c--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008400 477 L--------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (567)
Q Consensus 477 ~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 512 (567)
+ +|....+++.+|.+|..+|++++|+..|++++++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 8 67778899999999999999999999999999853
No 217
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.74 E-value=6.4e-08 Score=98.98 Aligned_cols=127 Identities=16% Similarity=0.099 Sum_probs=101.7
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|.+++.+.+..... .....++.++|.+|..+|++++|+.++++++.+
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK---------AAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 45567889999999999999999999999987764321 234567899999999999999999999999988
Q ss_pred CCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHH
Q 008400 478 DSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYN 533 (567)
Q Consensus 478 ~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n------~~~~~~l~~~~~~~~~~~ 533 (567)
.+.. ..+++++|.+|..+|++++|+..|++++++.+.. ..+...+..+....++..
T Consensus 257 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 324 (406)
T 3sf4_A 257 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHD 324 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 7655 7889999999999999999999999999986554 334445555544444333
No 218
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.72 E-value=1.5e-07 Score=97.97 Aligned_cols=124 Identities=12% Similarity=0.065 Sum_probs=98.0
Q ss_pred HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
....+....+.+......|+|++|+..|+++|.......... +......+.|+|.+|..+|+|++|+.+|+++
T Consensus 294 ~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 366 (433)
T 3qww_A 294 MVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKI 366 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 334455556666666667899999999999999865432221 2446677999999999999999999999999
Q ss_pred hcc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Q 008400 475 LDL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEI-----DPDNRDVKLEYKTL 525 (567)
Q Consensus 475 l~~-----~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~P~n~~~~~~l~~~ 525 (567)
|.+ -|++ ...|+++|.+|..+|+|++|+..|++|+++ -|+++.+......+
T Consensus 367 L~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 367 IKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 975 3444 578999999999999999999999999986 58887776655544
No 219
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.71 E-value=2.2e-07 Score=100.68 Aligned_cols=147 Identities=12% Similarity=0.043 Sum_probs=111.5
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCC-------------hHHHHHHH------HHHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG-------------DEEKKQAK------ALKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~-------------~e~~~~~~------~~~~~~~~nla~~~~ 459 (567)
...+...|..+++.|++++|+..|++++...+.+.... ++-....+ .....++++++.+|.
T Consensus 305 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 384 (597)
T 2xpi_A 305 SDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYL 384 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH
Confidence 44566788999999999999999999998766543320 00011111 112456788899999
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKF 539 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~ 539 (567)
+.|++++|+..++++++++|.+..+|+.++.+|...|++++|+..|++++++.|++..+...+..+....++..+. .+.
T Consensus 385 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A-~~~ 463 (597)
T 2xpi_A 385 CVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLA-NEY 463 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHH-HHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHH-HHH
Confidence 9999999999999999999999999999999999999999999999999999998887777777776666555433 346
Q ss_pred HHHhhHh
Q 008400 540 YGNMFAK 546 (567)
Q Consensus 540 ~~~~f~~ 546 (567)
|.++...
T Consensus 464 ~~~~~~~ 470 (597)
T 2xpi_A 464 LQSSYAL 470 (597)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666653
No 220
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.69 E-value=4e-08 Score=101.19 Aligned_cols=143 Identities=13% Similarity=0.138 Sum_probs=108.7
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|+..|.+++.+.+..... .....++.++|.+|..+|++++|+.++++++.+
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 292 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDR---------AAERRANSNLGNSHIFLGQFEDAAEHYKRTLAL 292 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH---------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 34567788999999999999999999999987753321 234557899999999999999999999999998
Q ss_pred CCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 478 DSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 478 ~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n------~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
.+.. ..+++++|.+|..+|++++|+..|++++++.+.. ..+...+..+...+++..+ ....|++...
T Consensus 293 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~al~ 371 (411)
T 4a1s_A 293 AVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHER-ALKYAEQHLQ 371 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHH-HHHHHHHHHH
Confidence 7744 7899999999999999999999999999986543 2244445555554444433 3345555555
Q ss_pred hhhhc
Q 008400 546 KMKSR 550 (567)
Q Consensus 546 ~~~~~ 550 (567)
.....
T Consensus 372 ~~~~~ 376 (411)
T 4a1s_A 372 LAXXX 376 (411)
T ss_dssp HCCHH
T ss_pred HHhhc
Confidence 44333
No 221
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=1.7e-07 Score=81.17 Aligned_cols=97 Identities=21% Similarity=0.161 Sum_probs=83.7
Q ss_pred HHHhhHHHHHHhccCHHHHHHHHHHHhccCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
..++++|.+++..++|++|+..++++++++|++ ..+++++|.+|..++++++|+.+|+++++++|++..+...+..+
T Consensus 29 ~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 108 (148)
T 2dba_A 29 EQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQA 108 (148)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHH
Confidence 447899999999999999999999999999998 89999999999999999999999999999999998888888887
Q ss_pred HHHHHHHHHHHHHHHHHhhHh
Q 008400 526 KEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 526 ~~~~~~~~~~e~~~~~~~f~~ 546 (567)
...+++..+. ...|.+.+..
T Consensus 109 ~~~~~~~~~A-~~~~~~al~~ 128 (148)
T 2dba_A 109 LEKLGRLDQA-VLDLQRCVSL 128 (148)
T ss_dssp HHHHTCHHHH-HHHHHHHHHH
T ss_pred HHHcCCHHHH-HHHHHHHHHc
Confidence 7766655543 3455555544
No 222
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.68 E-value=2.7e-07 Score=77.51 Aligned_cols=100 Identities=16% Similarity=0.233 Sum_probs=85.5
Q ss_pred HHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
....++.++|.++...++++.|+..+++++..+|.+..+++.+|.++..++++++|+..++++++++|++..+...+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 89 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHH
Confidence 34566889999999999999999999999999999999999999999999999999999999999999998888888877
Q ss_pred HHHHHHHHHHHHHHHHHhhHh
Q 008400 526 KEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 526 ~~~~~~~~~~e~~~~~~~f~~ 546 (567)
....++..+. ...|.+....
T Consensus 90 ~~~~~~~~~A-~~~~~~~~~~ 109 (131)
T 2vyi_A 90 LSSLNKHVEA-VAYYKKALEL 109 (131)
T ss_dssp HHHTTCHHHH-HHHHHHHHHH
T ss_pred HHHhCCHHHH-HHHHHHHHhc
Confidence 6666555433 3355555544
No 223
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.68 E-value=8.5e-08 Score=94.77 Aligned_cols=122 Identities=18% Similarity=0.133 Sum_probs=99.0
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc-
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL- 477 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~- 477 (567)
+..+...|..++..|+|++|+..|++++...+.+. .....++.++|.+|..+|++++|+..+++++.+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccH-----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 45677889999999999999999999999754321 334567899999999999999999999999887
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHHHH
Q 008400 478 -----DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD------VKLEYKTLKEKMKE 531 (567)
Q Consensus 478 -----~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~------~~~~l~~~~~~~~~ 531 (567)
.+....+++.+|.+|..+|++++|+..|++++++.|.... +...+..+....++
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 4455789999999999999999999999999998665422 44445555444444
No 224
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.68 E-value=1.1e-07 Score=93.98 Aligned_cols=140 Identities=16% Similarity=0.117 Sum_probs=107.4
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+..+...|..++..|+|++|+..|++++...+.... ......++.++|.++..+|++++|+..+++++.
T Consensus 181 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 251 (338)
T 3ro2_A 181 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLL 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34556788899999999999999999999998765332 133456789999999999999999999999998
Q ss_pred cCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008400 477 LDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN------RDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 477 ~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n------~~~~~~l~~~~~~~~~~~~~e~~~~~~~f 544 (567)
+.+.. ..+++.+|.+|..+|++++|+..|++++++.+.. ..+...+..+....++..+ ....|.+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~a~ 330 (338)
T 3ro2_A 252 LARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQ-AMHFAEKHL 330 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHH
T ss_pred HHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 86655 7899999999999999999999999999986543 1244445555554444433 233555554
Q ss_pred Hh
Q 008400 545 AK 546 (567)
Q Consensus 545 ~~ 546 (567)
..
T Consensus 331 ~~ 332 (338)
T 3ro2_A 331 EI 332 (338)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 225
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.67 E-value=2.5e-07 Score=81.77 Aligned_cols=99 Identities=18% Similarity=0.203 Sum_probs=84.4
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
....+.++|.+++..++|++|+..+.+++..+|.+..+++++|.++..+|++++|+.+|+++++++|.+..+...+..+.
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 44568899999999999999999999999999999999999999999999999999999999999999988888888776
Q ss_pred HHHHHHHHHHHHHHHHhhHh
Q 008400 527 EKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 527 ~~~~~~~~~e~~~~~~~f~~ 546 (567)
..+++..++ ...|.+.+..
T Consensus 92 ~~~~~~~~A-~~~~~~a~~~ 110 (166)
T 1a17_A 92 MALGKFRAA-LRDYETVVKV 110 (166)
T ss_dssp HHTTCHHHH-HHHHHHHHHH
T ss_pred HHhccHHHH-HHHHHHHHHh
Confidence 666555433 3355555443
No 226
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.66 E-value=1.5e-07 Score=93.40 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHH-hhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHH-HHHHHHHHH
Q 008400 415 YARASKRYEKAVK-YIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK-ALYRRAQAY 492 (567)
Q Consensus 415 ~~~A~~~y~~al~-~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k-a~~~~a~a~ 492 (567)
+++|+..|++|+. +.+... .++.++|.++.++|++++|+..|+++++++|.++. +|+++|.++
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~---------------~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 144 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNM---------------LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFA 144 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCH---------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccH---------------HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHH
Confidence 3999999999999 455332 23555666666666666666666666666665554 566666666
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 493 IQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 493 ~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
..+|++++|+..|++|++++|.+.
T Consensus 145 ~~~~~~~~A~~~~~~a~~~~p~~~ 168 (308)
T 2ond_A 145 RRAEGIKSGRMIFKKAREDARTRH 168 (308)
T ss_dssp HHHHCHHHHHHHHHHHHTSTTCCT
T ss_pred HHhcCHHHHHHHHHHHHhcCCCCH
Confidence 555666666666666655555543
No 227
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.66 E-value=3.4e-07 Score=95.24 Aligned_cols=127 Identities=8% Similarity=-0.030 Sum_probs=100.2
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+......-..+..+|+|++|+..|++++.......... +......+.|+|.+|..+|+|++|+.+|.++|
T Consensus 284 ~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L 356 (429)
T 3qwp_A 284 WKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTM 356 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 34455556666778889999999999999998754432221 24466779999999999999999999999998
Q ss_pred cc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHH
Q 008400 476 DL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEI-----DPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 476 ~~-----~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~P~n~~~~~~l~~~~~~~ 529 (567)
.+ -|++ ...++++|.+|..+|+|++|+..|++|+++ -|+++.....+..+....
T Consensus 357 ~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 423 (429)
T 3qwp_A 357 EPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECD 423 (429)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred HhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 74 3444 578999999999999999999999999986 688887777665554433
No 228
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.65 E-value=3.6e-07 Score=84.18 Aligned_cols=98 Identities=13% Similarity=-0.000 Sum_probs=83.4
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCH----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNV----------------KALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~----------------ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
....+.++|.++++.++|++|+..+++++.+.|.++ .+++++|.+|..+|+|++|+.+|+++++
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 445588999999999999999999999999999887 8999999999999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 511 IDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 511 l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
++|++..+...++.+...+++..++ ...|++.+.
T Consensus 117 ~~p~~~~~~~~lg~~~~~~~~~~~A-~~~~~~al~ 150 (198)
T 2fbn_A 117 IDKNNVKALYKLGVANMYFGFLEEA-KENLYKAAS 150 (198)
T ss_dssp HSTTCHHHHHHHHHHHHHHTCHHHH-HHHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHcccHHHH-HHHHHHHHH
Confidence 9999988888888777666655543 334555443
No 229
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.64 E-value=1.7e-07 Score=92.98 Aligned_cols=148 Identities=10% Similarity=0.076 Sum_probs=75.3
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCC-CChH---------HHHHHHHH----------HHHHHhhHHHHHH-
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-FGDE---------EKKQAKAL----------KVACNLNNAACKL- 459 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~-~~~e---------~~~~~~~~----------~~~~~~nla~~~~- 459 (567)
.+...|..+...|++++|...|+++++..+.+.. .-.. ..+..... ...++...+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~ 180 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 3455666666777777777777777775543321 0000 00000000 0011222232222
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh---CCC-CHHHHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI---DPD-NRDVKLEYKTLKEKMKEYNKK 535 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l---~P~-n~~~~~~l~~~~~~~~~~~~~ 535 (567)
.+|++++|+..|+++++.+|+++.++..+|..+..+|++++|+..|++|++. +|+ +..++..+.......+.....
T Consensus 181 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a 260 (308)
T 2ond_A 181 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASI 260 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 2466666666666666666666666666666666666666666666666663 442 445555555554444433322
Q ss_pred HHHHHHHhhHhhhh
Q 008400 536 EAKFYGNMFAKMKS 549 (567)
Q Consensus 536 e~~~~~~~f~~~~~ 549 (567)
.+.++++....+.
T Consensus 261 -~~~~~~a~~~~p~ 273 (308)
T 2ond_A 261 -LKVEKRRFTAFRE 273 (308)
T ss_dssp -HHHHHHHHHHTTT
T ss_pred -HHHHHHHHHHccc
Confidence 2455555554443
No 230
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.64 E-value=1e-07 Score=97.45 Aligned_cols=122 Identities=17% Similarity=0.119 Sum_probs=99.6
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc-
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL- 477 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~- 477 (567)
+..+...|..++..|+|++|+..|++++...+.+. .....++.++|.+|..+|+|++|+.++++++.+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDL-----------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCH-----------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccH-----------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999854321 234567899999999999999999999999887
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHHH
Q 008400 478 -----DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR------DVKLEYKTLKEKMKE 531 (567)
Q Consensus 478 -----~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~------~~~~~l~~~~~~~~~ 531 (567)
.|....+++++|.+|..+|++++|+..|++++++.|... .+...+..+....++
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 345578999999999999999999999999999876532 245555555555554
No 231
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.63 E-value=3.4e-07 Score=76.18 Aligned_cols=98 Identities=28% Similarity=0.378 Sum_probs=83.5
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
..+++++|.++...+++++|+..+++++..+|.+..+++.+|.++...|++++|+..|+++++++|.+..+...+..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 45588999999999999999999999999999999999999999999999999999999999999999888777777766
Q ss_pred HHHHHHHHHHHHHHHhhHh
Q 008400 528 KMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 528 ~~~~~~~~e~~~~~~~f~~ 546 (567)
..++..+ ....|.+++..
T Consensus 89 ~~~~~~~-A~~~~~~~~~~ 106 (125)
T 1na0_A 89 KQGDYDE-AIEYYQKALEL 106 (125)
T ss_dssp HTTCHHH-HHHHHHHHHHH
T ss_pred HhcCHHH-HHHHHHHHHHh
Confidence 5554443 23455555544
No 232
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.62 E-value=1.9e-07 Score=91.62 Aligned_cols=96 Identities=15% Similarity=0.168 Sum_probs=83.5
Q ss_pred HHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 449 ACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 449 ~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
..+.++|.++++.|+|++|+..+++++.++|++..+++++|.+|..+|++++|+.+|++|++++|++..+...++.+...
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 84 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE 84 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999998888888887776
Q ss_pred HHHHHHHHHHHHHHhhH
Q 008400 529 MKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 529 ~~~~~~~e~~~~~~~f~ 545 (567)
+++..++. +.|.+.+.
T Consensus 85 ~g~~~~A~-~~~~~al~ 100 (281)
T 2c2l_A 85 MESYDEAI-ANLQRAYS 100 (281)
T ss_dssp TTCHHHHH-HHHHHHHH
T ss_pred cCCHHHHH-HHHHHHHH
Confidence 66555433 34555544
No 233
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.61 E-value=3.2e-07 Score=88.93 Aligned_cols=75 Identities=15% Similarity=0.060 Sum_probs=46.7
Q ss_pred HHHhhHHHHHHh----ccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHH
Q 008400 449 ACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKL 520 (567)
Q Consensus 449 ~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~n~~~~~ 520 (567)
.+++++|.+|.. .+++++|+.+++++++. +++.+++++|.+|.. .+++++|+.+|++|++++ +..+..
T Consensus 75 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~ 150 (273)
T 1ouv_A 75 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCT 150 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHH
Confidence 345666666666 66666666666666665 356666666666666 666666666666666654 334444
Q ss_pred HHHHHHH
Q 008400 521 EYKTLKE 527 (567)
Q Consensus 521 ~l~~~~~ 527 (567)
.+..+..
T Consensus 151 ~lg~~~~ 157 (273)
T 1ouv_A 151 ILGSLYD 157 (273)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 234
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.61 E-value=1.4e-08 Score=103.78 Aligned_cols=85 Identities=12% Similarity=0.264 Sum_probs=73.1
Q ss_pred cCCCCCCeEEEEEEEEeCCCeEeeec--cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCC
Q 008400 167 ENPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGA 244 (567)
Q Consensus 167 ~~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~ 244 (567)
..+..||.|++||++.. +|+.|+++ .++.|.+|.|.++|||+++|.||+.|+++.|.||....||..+
T Consensus 159 ~~~~~gD~V~i~y~g~~-dG~~fd~~~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~--------- 228 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSI-DGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEN--------- 228 (392)
T ss_dssp CCCCTTCEEEEEEEEES-SSSCCTTCEEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTT---------
T ss_pred CCCCCCCEEEEEEEEEE-CCEEccCCCccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCC---------
Confidence 35789999999999995 89999876 7899999999999999999999999999999997334677433
Q ss_pred CCCCCeEEEEEEeecccc
Q 008400 245 VPPNATLQIALELVSWKT 262 (567)
Q Consensus 245 ip~~~~l~~~v~l~~~~~ 262 (567)
.++.+++|+|+|..+..
T Consensus 229 -laGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 229 -LKGKAAKFAIKVNKVEA 245 (392)
T ss_dssp -TSSCEEEECCCEEEEEE
T ss_pred -CCCCeEEEEEEEEEEEc
Confidence 36889999999998754
No 235
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.60 E-value=2.3e-07 Score=78.07 Aligned_cols=98 Identities=21% Similarity=0.253 Sum_probs=82.0
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-------HHHHH
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN-------RDVKL 520 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n-------~~~~~ 520 (567)
...++++|.++...++|++|+..+.+++..+|.++.+++++|.+|..+|++++|+.+|++++++.|.+ ..+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 34588999999999999999999999999999999999999999999999999999999999998877 66777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 521 EYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 521 ~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
.+..+....++..+. ...|.+.+..
T Consensus 84 ~la~~~~~~~~~~~A-~~~~~~~~~~ 108 (131)
T 1elr_A 84 RIGNSYFKEEKYKDA-IHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHhccHHHH-HHHHHHHHHh
Confidence 777766665554433 3455555553
No 236
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.59 E-value=1.3e-08 Score=107.93 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=87.7
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..+++.|+|++|+..|++|+++.+... .+++++|.+|.++|++++|+..++++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---------------~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI---------------KGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH---------------HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56678899999999999999999999999866432 348999999999999999999999999999
Q ss_pred CCCHHHHHHHHHH--HHhcCCHHHHHHHHH-----------HHHHhCCCC
Q 008400 479 SRNVKALYRRAQA--YIQMADLDLAEFDIK-----------KALEIDPDN 515 (567)
Q Consensus 479 p~~~ka~~~~a~a--~~~l~~~~~A~~~~~-----------~al~l~P~n 515 (567)
|++..++++++.+ +..++++++|++.++ +++.++|+.
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999998 899999999999999 888888764
No 237
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.58 E-value=1.4e-07 Score=99.07 Aligned_cols=120 Identities=15% Similarity=0.072 Sum_probs=95.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc--cCHHHHHHHHHHHhc
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL--KDYKQAEKLCTKVLD 476 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~--~~~~~Ai~~~~~al~ 476 (567)
+..+.+.|..++..|+|++|+..|++++.+.+....... .....++.++|.++++. ++|++|+.+|++|++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~ 166 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR-------IESPELDCEEGWTRLKCGGNQNERAKVCFEKALE 166 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC-------CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc-------hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 345668899999999999999999999998765432110 01123477788777765 479999999999999
Q ss_pred cCCCCHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 477 LDSRNVKALYRRAQAYIQ---MADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~---l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
++|+++.+++.+|.++.. .+++++|+..|++|++++|++..+...+...
T Consensus 167 ~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~ 218 (472)
T 4g1t_A 167 KKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALK 218 (472)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Confidence 999999999999988654 5777899999999999999998877766644
No 238
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.57 E-value=4e-07 Score=88.37 Aligned_cols=109 Identities=16% Similarity=0.074 Sum_probs=81.4
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC--
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-- 478 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-- 478 (567)
....+|..+++.++|.+|+..|+.++..-. ..+...+++++|.++..+|++++|+..|++++.-.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d-------------~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPD-------------KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCC-------------cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 456777788888888888888875543310 01223467888888888888888888888887543
Q ss_pred CC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008400 479 SR-NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK 523 (567)
Q Consensus 479 p~-~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~ 523 (567)
|. .+.+++++|.|+..+|+.++|+..|++++..+|+ ..+...|.
T Consensus 204 P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp TTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 54 5678888888888888888888888888888888 66665553
No 239
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.55 E-value=2.5e-07 Score=81.36 Aligned_cols=88 Identities=11% Similarity=0.165 Sum_probs=73.4
Q ss_pred HhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 459 LKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADL----------DLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 459 ~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~----------~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
.+++.|++|+..++++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++.++...++.+...
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999875 599999999999999999999888888776
Q ss_pred HH----------HHHHHHHHHHHHhhHh
Q 008400 529 MK----------EYNKKEAKFYGNMFAK 546 (567)
Q Consensus 529 ~~----------~~~~~e~~~~~~~f~~ 546 (567)
+. ..-++..+.|++...-
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 64 2333344566666553
No 240
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.55 E-value=3.6e-07 Score=98.72 Aligned_cols=123 Identities=10% Similarity=-0.036 Sum_probs=102.1
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcH-HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccC--------
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD-------- 463 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~-~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~-------- 463 (567)
..|++.-.........+.+.++| ++|+..|.+++...|... .+|++++.+..++++
T Consensus 22 ~~k~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~---------------taW~~R~~~l~~l~~~~~~~~~~ 86 (567)
T 1dce_A 22 EQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFA---------------TLWNCRREVLQHLETEKSPEESA 86 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhH---------------HHHHHHHHHHHhcccccchhhhh
Confidence 34444444445555556666766 678999999999987654 348999999999988
Q ss_pred --HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 464 --YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 464 --~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~--~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
+++|+..++++++.+|++..||+.|+-++..++ ++++|++++.++++++|.|..++...+.+...+.
T Consensus 87 ~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~ 157 (567)
T 1dce_A 87 ALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAA 157 (567)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999 7799999999999999999988888887766655
No 241
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.53 E-value=7.2e-07 Score=73.19 Aligned_cols=79 Identities=25% Similarity=0.216 Sum_probs=68.9
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccC-------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLD-------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK 523 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~-------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~ 523 (567)
++.+|..+++.++|..|+..+++|++.. +.....+.++|.||..+|+++.|+..+++|++++|++..+...+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 7799999999999999999999999863 345788999999999999999999999999999999988766666
Q ss_pred HHHHHH
Q 008400 524 TLKEKM 529 (567)
Q Consensus 524 ~~~~~~ 529 (567)
.+...+
T Consensus 88 ~~~~~~ 93 (104)
T 2v5f_A 88 YFEYIM 93 (104)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 242
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.53 E-value=6.3e-07 Score=96.82 Aligned_cols=116 Identities=13% Similarity=0.010 Sum_probs=103.8
Q ss_pred HhhhhhhhhHHHhcCc----------HHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc--CHHH
Q 008400 399 AGKKKEQGNTLFKAGK----------YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQ 466 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~----------~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~--~~~~ 466 (567)
...+..+|..+...++ |++|+..|.++++..+.+.. +|++++.+..+++ +|++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~---------------aW~hR~w~l~~l~~~~~~~ 127 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG---------------TWHHRCWLLSRLPEPNWAR 127 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH---------------HHHHHHHHHHHcccccHHH
Confidence 4566777888877777 99999999999998776543 4899999999999 7899
Q ss_pred HHHHHHHHhccCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 467 AEKLCTKVLDLDSRNVKALYRRAQAYIQMA-DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 467 Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
|+..|++++++||.|..||+.|+.++..++ .+++|++++.++++++|.|..++.....+...+
T Consensus 128 el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 128 ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 999999999999999999999999999999 999999999999999999999999888876664
No 243
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.52 E-value=8.1e-07 Score=81.36 Aligned_cols=110 Identities=15% Similarity=0.039 Sum_probs=91.2
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+...|..++..|+|++|+..|.+++.+....... ......+++++|.++..+|++++|+.++++++
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED--------PLAASANAYEVATVALHFGDLAGARQEYEKSL 134 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc--------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3456778899999999999999999999999987644322 12355678999999999999999999999998
Q ss_pred ccCC--CC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008400 476 DLDS--RN----VKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (567)
Q Consensus 476 ~~~p--~~----~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 513 (567)
.+.+ .+ ..++.++|.++..+|++++|+..+++++++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 135 VYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 7632 22 35678999999999999999999999998743
No 244
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.52 E-value=4e-07 Score=85.12 Aligned_cols=128 Identities=14% Similarity=0.004 Sum_probs=92.4
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc-----------cCCC--ChHHH-----HHHHHHHHHHHhhHHHHHHh
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY-----------DTSF--GDEEK-----KQAKALKVACNLNNAACKLK 460 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~-----------~~~~--~~e~~-----~~~~~~~~~~~~nla~~~~k 460 (567)
+..+...|..++..+++.+|+..|++|++.... .... ..++- ...+.-...+++|+|.+|..
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~ 97 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVN 97 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Confidence 456677788888888888888888887764211 0000 01110 01111234568899999988
Q ss_pred ----ccCHHHHHHHHHHHhccCC--CCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 461 ----LKDYKQAEKLCTKVLDLDS--RNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 461 ----~~~~~~Ai~~~~~al~~~p--~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
.+++.+|+.++.++++..+ .++.+++++|.+|.. .+++++|+.+|++|+++ |.+..+...|..+..
T Consensus 98 g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~ 173 (212)
T 3rjv_A 98 RQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQ 173 (212)
T ss_dssp GGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHH
Confidence 8899999999999999887 458999999999999 88999999999999998 566666666666644
No 245
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.50 E-value=1.3e-07 Score=79.25 Aligned_cols=87 Identities=11% Similarity=0.150 Sum_probs=71.7
Q ss_pred hccCHHHHHHHHHHHhcc---CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDL---DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~---~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e 536 (567)
.+|++++|+..+++++++ +|+++.+++++|.+|..+|+|++|+..|+++++++|++..+...+..+...+++..+..
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 468999999999999999 69999999999999999999999999999999999999999999988887777666544
Q ss_pred HHHHHHhhHhh
Q 008400 537 AKFYGNMFAKM 547 (567)
Q Consensus 537 ~~~~~~~f~~~ 547 (567)
..|.+.+...
T Consensus 82 -~~~~~al~~~ 91 (117)
T 3k9i_A 82 -ELLLKIIAET 91 (117)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHhC
Confidence 4566665543
No 246
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.49 E-value=1.3e-06 Score=84.67 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=68.7
Q ss_pred HHHHhhHHHHHHh----ccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHH
Q 008400 448 VACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVK 519 (567)
Q Consensus 448 ~~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~n~~~~ 519 (567)
..+++++|.+|.. .+++++|+.+++++++.+ +..+++++|.+|.. .+++++|+.+|+++++.+ +..+.
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~ 185 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGC 185 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHH
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHH
Confidence 3457888999988 889999999999998875 67888899999888 889999999999998874 45566
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHHHhhH
Q 008400 520 LEYKTLKEK----MKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 520 ~~l~~~~~~----~~~~~~~e~~~~~~~f~ 545 (567)
..+..+... .++..+ ....|++...
T Consensus 186 ~~lg~~~~~g~~~~~~~~~-A~~~~~~a~~ 214 (273)
T 1ouv_A 186 FNAGNMYHHGEGATKNFKE-ALARYSKACE 214 (273)
T ss_dssp HHHHHHHHHTCSSCCCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccHHH-HHHHHHHHHh
Confidence 666666555 433332 2334555443
No 247
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.49 E-value=4.1e-07 Score=92.98 Aligned_cols=96 Identities=23% Similarity=0.177 Sum_probs=82.4
Q ss_pred HHhhHHHHHHhccCHHHHHHHHHHHhc----------------cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008400 450 CNLNNAACKLKLKDYKQAEKLCTKVLD----------------LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (567)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~----------------~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 513 (567)
.+.++|.++++.++|++|+..|+++|+ ++|.+..+|+++|.+|+.+++|++|+.+|++|++++|
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 304 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDP 304 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCc
Confidence 477999999999999999999999998 7888899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 514 DNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 514 ~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
++..+...++.+...+++..++ ...|++.+..
T Consensus 305 ~~~~a~~~lg~~~~~~g~~~eA-~~~l~~Al~l 336 (370)
T 1ihg_A 305 SNTKALYRRAQGWQGLKEYDQA-LADLKKAQEI 336 (370)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHH-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHccCHHHH-HHHHHHHHHh
Confidence 9988888888877776665543 3355555443
No 248
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.47 E-value=9e-07 Score=87.56 Aligned_cols=120 Identities=18% Similarity=0.107 Sum_probs=77.4
Q ss_pred HhcCcH-HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc--CHHHHHHHHHHHhccCCCCHHHHH
Q 008400 410 FKAGKY-ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKVLDLDSRNVKALY 486 (567)
Q Consensus 410 ~~~g~~-~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~--~~~~Ai~~~~~al~~~p~~~ka~~ 486 (567)
.+.++| ++|+..+.++|.+.|.... ++++++.+...++ ++++++..++++|..+|.+..+|+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~nP~~~t---------------aWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~ 107 (306)
T 3dra_A 43 MKAEEYSERALHITELGINELASHYT---------------IWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWN 107 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTTCHH---------------HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHCcHHHH---------------HHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHH
Confidence 344454 5777777777777665432 3667777777777 777777777777777777777777
Q ss_pred HHHHHH----Hhc---CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhh
Q 008400 487 RRAQAY----IQM---ADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN-KKEAKFYGNMF 544 (567)
Q Consensus 487 ~~a~a~----~~l---~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~-~~e~~~~~~~f 544 (567)
.|+.++ ..+ +++++++.++.++++.+|+|..++...+.+...+.... ..+-..+.+++
T Consensus 108 ~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i 173 (306)
T 3dra_A 108 YRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVI 173 (306)
T ss_dssp HHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 777777 555 66777777777777777777666666666555544322 13334444444
No 249
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.46 E-value=8.9e-07 Score=72.65 Aligned_cols=83 Identities=19% Similarity=0.136 Sum_probs=70.2
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+.+.|..+|+.++|..|+.-|+.|++..+...... .....++.++|.|+.++|+++.|+..++++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~--------~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIST--------IDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCS--------SCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCc--------ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 45567899999999999999999999999875432110 1244668999999999999999999999999999
Q ss_pred CCCHHHHHHHH
Q 008400 479 SRNVKALYRRA 489 (567)
Q Consensus 479 p~~~ka~~~~a 489 (567)
|++..++.+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 99999988887
No 250
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.44 E-value=4.8e-07 Score=84.60 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=81.2
Q ss_pred hhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc----CHHHHHHHHHHHhccCCCC
Q 008400 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK----DYKQAEKLCTKVLDLDSRN 481 (567)
Q Consensus 406 G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~----~~~~Ai~~~~~al~~~p~~ 481 (567)
...++..|..-.....|.+|+.++.... +.-...+++++|.+|.. + ++++|+.+++++++ +.+
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~----------~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~ 84 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAA----------AQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGS 84 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH----------HTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHH----------HcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCC
Confidence 3444444554444555666666654321 11234568899999998 7 89999999999965 678
Q ss_pred HHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH
Q 008400 482 VKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPD--NRDVKLEYKTLKEK 528 (567)
Q Consensus 482 ~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~--n~~~~~~l~~~~~~ 528 (567)
+.+++++|.+|.. .+++++|+.+|++|++..|. +..+...|..+...
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 9999999999998 89999999999999999884 35677777666544
No 251
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.44 E-value=1.1e-06 Score=70.42 Aligned_cols=69 Identities=19% Similarity=0.042 Sum_probs=62.0
Q ss_pred HHHhhHHHHHHhccC---HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 008400 449 ACNLNNAACKLKLKD---YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD 517 (567)
Q Consensus 449 ~~~~nla~~~~k~~~---~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~ 517 (567)
.++..+|.+++..++ ..+|...++++|.+||+++++++.+|.+++..|+|++|+..++++++.+|.+..
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 346778888876655 799999999999999999999999999999999999999999999999999543
No 252
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.42 E-value=2e-06 Score=85.08 Aligned_cols=113 Identities=12% Similarity=-0.136 Sum_probs=74.0
Q ss_pred HhhhhhhhhHHHhcC--cHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHH----Hhc---cCHHHHHH
Q 008400 399 AGKKKEQGNTLFKAG--KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACK----LKL---KDYKQAEK 469 (567)
Q Consensus 399 a~~~~~~G~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~----~k~---~~~~~Ai~ 469 (567)
...+..+|..+...+ ++++|+..+..+|...|.+... ++.++.+. .++ +++++++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~a---------------W~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQI---------------WNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHH---------------HHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHH---------------HHHHHHHHHHHHHhccccCCHHHHHH
Confidence 456678888888888 9999999999999987765432 44555444 344 45666666
Q ss_pred HHHHHhccCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008400 470 LCTKVLDLDSRNVKALYRRAQAYIQMADLD--LAEFDIKKALEIDPDNRDVKLEYKTLK 526 (567)
Q Consensus 470 ~~~~al~~~p~~~ka~~~~a~a~~~l~~~~--~A~~~~~~al~l~P~n~~~~~~l~~~~ 526 (567)
.|+++|+.+|.|..+|+.|+.++..++.++ ++++.+.++++.+|.|-.++.....+.
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll 190 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLL 190 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 666666666666666666666666666655 666666666666666655555444443
No 253
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.40 E-value=2.7e-06 Score=85.18 Aligned_cols=121 Identities=15% Similarity=0.042 Sum_probs=103.4
Q ss_pred hcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc-CHHHHHHHHHHHhccCCCCHHHHHHHH
Q 008400 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKVLDLDSRNVKALYRRA 489 (567)
Q Consensus 411 ~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~-~~~~Ai~~~~~al~~~p~~~ka~~~~a 489 (567)
+.....+|+..+.++|.+.|... .++++++.+...++ .+++++..++++|..+|++..+|+.|+
T Consensus 66 ~~e~se~AL~lt~~~L~~nP~~y---------------taWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~ 130 (349)
T 3q7a_A 66 KEEKSERALELTEIIVRMNPAHY---------------TVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRL 130 (349)
T ss_dssp TTCCSHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHhCchhH---------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 34455789999999999988654 34889999999999 599999999999999999999999999
Q ss_pred HHHHhc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH-------HHHHHHHHHhhHh
Q 008400 490 QAYIQM-A-DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYN-------KKEAKFYGNMFAK 546 (567)
Q Consensus 490 ~a~~~l-~-~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~-------~~e~~~~~~~f~~ 546 (567)
.++..+ + +++++++.+.++++++|+|..++...+.+...+.... ..+-..+.++...
T Consensus 131 wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~ 196 (349)
T 3q7a_A 131 LLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 (349)
T ss_dssp HHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh
Confidence 999998 8 9999999999999999999999988888877776655 3566666666653
No 254
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.39 E-value=3.1e-06 Score=85.87 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=83.3
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~ 477 (567)
.+..+...|..++..|+|++|...|.+++...+..... .....+++++|.++..+|++.+|+..+.+++.+
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW---------HYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcH---------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 44566778888888999999999999999876654321 223455778888888888888888888888876
Q ss_pred C--------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008400 478 D--------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (567)
Q Consensus 478 ~--------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 514 (567)
. |....++.++|.++..+|++++|+..+++++.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 4 334567778888888888888888888888888765
No 255
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.36 E-value=2.4e-06 Score=85.15 Aligned_cols=111 Identities=9% Similarity=-0.061 Sum_probs=71.9
Q ss_pred hhhhHHHhcCcHH-HHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccC----------HHHHHHHHH
Q 008400 404 EQGNTLFKAGKYA-RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKD----------YKQAEKLCT 472 (567)
Q Consensus 404 ~~G~~~~~~g~~~-~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~----------~~~Ai~~~~ 472 (567)
+.-....+.|+|. +|+..+.++|.+.|.... +++.++.+...++. +++++..++
T Consensus 34 ~~~~~~~~~~e~s~eaL~~t~~~L~~nP~~yt---------------aWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~ 98 (331)
T 3dss_A 34 QAVFQKRQAGELDESVLELTSQILGANPDFAT---------------LWNCRREVLQHLETEKSPEESAALVKAELGFLE 98 (331)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHHHTTCTTCHH---------------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHCchhHH---------------HHHHHHHHHHHhcccccchhhhHHHHHHHHHHH
Confidence 3333444678876 799999999998876442 25555555555444 566666666
Q ss_pred HHhccCCCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 473 KVLDLDSRNVKALYRRAQAYIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 473 ~al~~~p~~~ka~~~~a~a~~~l~--~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
.+|..+|.+..+|+.|+.++..++ .+++++.++.++++++|.|..++...+.+...+
T Consensus 99 ~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l 157 (331)
T 3dss_A 99 SCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQA 157 (331)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 666666666666666666666666 366666666666666666666665555554443
No 256
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.33 E-value=7.1e-07 Score=80.53 Aligned_cols=70 Identities=13% Similarity=0.025 Sum_probs=53.1
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLE 521 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~ 521 (567)
++++|..++..|++++|+..|+++++.+|+++.+++.+|.++..+|++++|+..|+++++++| +......
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~ 78 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSL 78 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHH
Confidence 567777777788888888888888887888888888888888888888888877777777777 6544433
No 257
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.30 E-value=3.4e-06 Score=70.67 Aligned_cols=103 Identities=13% Similarity=0.170 Sum_probs=82.0
Q ss_pred CcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHH---HHHHHHHHhccC-C-CCHHHHHH
Q 008400 413 GKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQ---AEKLCTKVLDLD-S-RNVKALYR 487 (567)
Q Consensus 413 g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~---Ai~~~~~al~~~-p-~~~ka~~~ 487 (567)
.....+.+.|.+++...+ . ...+.+|+|.|+.+.++... +|..+..++..+ | .+-.++|.
T Consensus 15 ~~l~~~~~~y~~e~~~~~--~-------------s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~ 79 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGS--V-------------SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFY 79 (126)
T ss_dssp HHHHHHHHHHHHHHHHSC--C-------------CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCC--C-------------cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 344556666776654321 1 12447899999999887766 999999999877 5 56799999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 488 RAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 488 ~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
+|.+++++|+|++|+.+++..|+++|+|..+..+...+..++.
T Consensus 80 LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 80 LAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMK 122 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888777766553
No 258
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.29 E-value=1.1e-05 Score=80.26 Aligned_cols=100 Identities=13% Similarity=0.020 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc--CHHHHHHHHHHHhccCCCCHHHHHHHHHHH
Q 008400 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK--DYKQAEKLCTKVLDLDSRNVKALYRRAQAY 492 (567)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~--~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~ 492 (567)
+.+++..+..++...|.+. .++++++.+..+++ .|++++..|+++|+.+|.|..||+.|+.++
T Consensus 90 l~~EL~~~~~~L~~~PKny---------------~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl 154 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSY---------------GTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 154 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCH---------------HHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCH---------------HHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 7899999999998877544 34889999999998 499999999999999999999999999999
Q ss_pred HhcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 493 IQMAD-LDLAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 493 ~~l~~-~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
..++. ++++++++.++++.+|.|..++.....+...+
T Consensus 155 ~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 155 AQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999 69999999999999999999988888776665
No 259
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.29 E-value=4.4e-06 Score=72.28 Aligned_cols=96 Identities=11% Similarity=-0.060 Sum_probs=77.4
Q ss_pred hhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh----ccCHHHHHHHHHHHhccCCC
Q 008400 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 405 ~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~ 480 (567)
.|..++..+.+.+|++.|++|.+.-. ..+++|+|.+|.. .+++.+|+.+++++.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g~-----------------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELNS-----------------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCCC-----------------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 66777777788889999999887521 2447899999998 88999999999999876 6
Q ss_pred CHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008400 481 NVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDVKLE 521 (567)
Q Consensus 481 ~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~n~~~~~~ 521 (567)
++.+++++|.+|.. .+++++|+.+|++|.+.. +..+...
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~ 134 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGI 134 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHH
Confidence 78999999999999 899999999999998873 4444433
No 260
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.28 E-value=1.3e-06 Score=70.93 Aligned_cols=80 Identities=13% Similarity=0.039 Sum_probs=65.1
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
+..+...|..++..|+|++|+..|+++++..+.... +++++|.||.++|++++|+..+++++++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~---------------a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVG---------------TYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH---------------HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH---------------HHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 456788999999999999999999999999876553 48999999999999999999999999986
Q ss_pred CC--CHHHHHHHHHHHH
Q 008400 479 SR--NVKALYRRAQAYI 493 (567)
Q Consensus 479 p~--~~ka~~~~a~a~~ 493 (567)
|. +..+...+..++.
T Consensus 72 ~~~~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 72 REEGTQKDLSELQDAKL 88 (100)
T ss_dssp HHHSCHHHHHHHHHHHH
T ss_pred hcCCchhHHHHHHHHHH
Confidence 53 3444444444433
No 261
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.23 E-value=2.3e-06 Score=82.99 Aligned_cols=130 Identities=11% Similarity=-0.027 Sum_probs=99.4
Q ss_pred hhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCC-
Q 008400 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN- 481 (567)
Q Consensus 403 ~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~- 481 (567)
...+..+...|+|++|.+.|..++...+. .. +++++|.++++.++|.+|+.+++.++...++.
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~---------------~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~ 169 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSE---------------HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFL 169 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCH---------------HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCc---------------hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCccc
Confidence 34567888899999999999877653321 12 47899999999999999999999888763221
Q ss_pred -HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhh
Q 008400 482 -VKALYRRAQAYIQMADLDLAEFDIKKALEID--PD-NRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMKS 549 (567)
Q Consensus 482 -~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~--P~-n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~~ 549 (567)
..+++++|.++..+|++++|+.+|++++.-. |. ..++...+..+...+.+..+ ....|+++...-..
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~de-A~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESA-AVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhcCCc
Confidence 4589999999999999999999999998654 55 44566677777666665543 44577777776444
No 262
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.23 E-value=1.3e-06 Score=85.74 Aligned_cols=112 Identities=12% Similarity=-0.049 Sum_probs=88.9
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCC-------------CChHHHHHH------HHHHHHHHhhHHHHHH
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-------------FGDEEKKQA------KALKVACNLNNAACKL 459 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~-------------~~~e~~~~~------~~~~~~~~~nla~~~~ 459 (567)
+..+...|..+...|++++|+..|++++...+.... ...+..... ......+++++|.++.
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~ 230 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLH 230 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 566788889999999999999999888765442110 000011111 1123567899999999
Q ss_pred hccCHHHHHHHHHHHhccCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRN--VKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
.+|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|...|++++.
T Consensus 231 ~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 231 QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999998 99999999999999999999999999985
No 263
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.22 E-value=6.9e-06 Score=68.06 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=68.3
Q ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 008400 466 QAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFA 545 (567)
Q Consensus 466 ~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~ 545 (567)
.|+..++++++.+|+++.+++++|.+|..+|++++|+..|+++++++|++..+...+..+....++..+. ...|.+.+.
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A-~~~~~~al~ 81 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGA-RQAWESGLA 81 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHH-HHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999998888888887776655543 345555554
Q ss_pred h
Q 008400 546 K 546 (567)
Q Consensus 546 ~ 546 (567)
.
T Consensus 82 ~ 82 (115)
T 2kat_A 82 A 82 (115)
T ss_dssp H
T ss_pred h
Confidence 4
No 264
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.17 E-value=9.2e-06 Score=86.00 Aligned_cols=96 Identities=19% Similarity=0.078 Sum_probs=76.1
Q ss_pred HHHHhhHHHHHHh----ccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCC---CH
Q 008400 448 VACNLNNAACKLK----LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPD---NR 516 (567)
Q Consensus 448 ~~~~~nla~~~~k----~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~---n~ 516 (567)
..+++++|.+|.. .+++++|+.+++++++. .++.+++++|.+|.. .+++++|+.+|++|++.+|+ +.
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~ 440 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTE 440 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCCH
Confidence 4568899999999 89999999999999986 479999999999999 89999999999999999955 76
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Q 008400 517 DVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 517 ~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~ 548 (567)
.+...+..+... ......++.++.|.+..
T Consensus 441 ~a~~~l~~~~~~---~~~~a~~~a~~~~~~~~ 469 (490)
T 2xm6_A 441 NRNITEKKLTAK---QLQQAELLSQQYIEKYA 469 (490)
T ss_dssp HHHHHHTTSCHH---HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCHh---HHHHHHHHHHHHHHHHH
Confidence 676666665332 22223345666776643
No 265
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.17 E-value=4.2e-06 Score=88.36 Aligned_cols=113 Identities=12% Similarity=0.015 Sum_probs=92.9
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+.+.|..+..+|+|++|+..|+++|.......... +......++|+|..|..+|+|++|+..+.+||
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45678889999999999999999999999999865433221 24466679999999999999999999999998
Q ss_pred cc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 476 DL-----DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 476 ~~-----~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
++ -|++ .+.+-+++.++..++.|++|...|.++.+-.-+|
T Consensus 421 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~ 468 (490)
T 3n71_A 421 AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNN 468 (490)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 74 4555 4667789999999999999999999987644334
No 266
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.16 E-value=6.1e-06 Score=82.61 Aligned_cols=116 Identities=9% Similarity=-0.126 Sum_probs=101.5
Q ss_pred HhhhhhhhhHHHhcC-cHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc-c-CHHHHHHHHHHHh
Q 008400 399 AGKKKEQGNTLFKAG-KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-K-DYKQAEKLCTKVL 475 (567)
Q Consensus 399 a~~~~~~G~~~~~~g-~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-~-~~~~Ai~~~~~al 475 (567)
...+..++..+...+ .+++|+..+..+|...+.+.. +++.++.+..++ + ++++++..|+++|
T Consensus 88 ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~---------------aW~hR~wlL~~l~~~~~~~EL~~~~k~L 152 (349)
T 3q7a_A 88 YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ---------------VWHHRLLLLDRISPQDPVSEIEYIHGSL 152 (349)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH---------------HHHHHHHHHHHHCCSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH---------------HHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 345677788888878 599999999999988776543 488999999888 7 9999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHhcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008400 476 DLDSRNVKALYRRAQAYIQMADLD--------LAEFDIKKALEIDPDNRDVKLEYKTLKEKM 529 (567)
Q Consensus 476 ~~~p~~~ka~~~~a~a~~~l~~~~--------~A~~~~~~al~l~P~n~~~~~~l~~~~~~~ 529 (567)
+.+|.|..||+.|+-++..++.++ ++++.++++++.+|.|-.+......+...+
T Consensus 153 ~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l 214 (349)
T 3q7a_A 153 LPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSR 214 (349)
T ss_dssp SSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTS
T ss_pred HhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999888 999999999999999998888887775544
No 267
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.14 E-value=7.7e-06 Score=87.54 Aligned_cols=148 Identities=10% Similarity=0.027 Sum_probs=81.7
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCC-C-C--------hHHHHHHHHHHH----------HHHhhHHH-HHH
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS-F-G--------DEEKKQAKALKV----------ACNLNNAA-CKL 459 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~-~-~--------~e~~~~~~~~~~----------~~~~nla~-~~~ 459 (567)
.+...|..+.+.|++++|...|++++...+.+.. . . ....+....... .++...+. ++.
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~ 402 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 402 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 3445666777788888888888888876543210 0 0 000000001100 11122222 233
Q ss_pred hccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHHHHHHH
Q 008400 460 KLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRD----VKLEYKTLKEKMKEYNKK 535 (567)
Q Consensus 460 k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~----~~~~l~~~~~~~~~~~~~ 535 (567)
.+|++++|+..++++++.+|+++.++...+..+..+|++++|+..|++|+...|.++. ++..+.......+.. +.
T Consensus 403 ~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~-~~ 481 (530)
T 2ooe_A 403 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDL-AS 481 (530)
T ss_dssp HTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCH-HH
T ss_pred HcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCH-HH
Confidence 5677777777777777777777777777777777777777777777777776554432 444444443333322 23
Q ss_pred HHHHHHHhhHhhhh
Q 008400 536 EAKFYGNMFAKMKS 549 (567)
Q Consensus 536 e~~~~~~~f~~~~~ 549 (567)
..+.++++...++.
T Consensus 482 ~~~~~~r~~~~~p~ 495 (530)
T 2ooe_A 482 ILKVEKRRFTAFRE 495 (530)
T ss_dssp HHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHCch
Confidence 34456666666554
No 268
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.11 E-value=8.8e-06 Score=87.08 Aligned_cols=129 Identities=15% Similarity=0.093 Sum_probs=64.1
Q ss_pred HhhhhhhhhHHHh-------cCcHH-------HHHHHHHHHHH-hhhccCCC------------ChHH-HHHHHHH----
Q 008400 399 AGKKKEQGNTLFK-------AGKYA-------RASKRYEKAVK-YIEYDTSF------------GDEE-KKQAKAL---- 446 (567)
Q Consensus 399 a~~~~~~G~~~~~-------~g~~~-------~A~~~y~~al~-~~~~~~~~------------~~e~-~~~~~~~---- 446 (567)
...+...|..+.. .|+++ +|+..|++|+. ..|..... ..++ ....+..
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~ 351 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIE 351 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcc
Confidence 3445566776665 68887 99999999997 55532211 0000 0000000
Q ss_pred ---HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH-HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008400 447 ---KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA-YIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (567)
Q Consensus 447 ---~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a-~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l 522 (567)
...+|.+++.++.++|++++|+..+++|++..|.+...++..+.. +..+|++++|+..|+++++..|++..+...+
T Consensus 352 p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~ 431 (530)
T 2ooe_A 352 DIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAY 431 (530)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHH
Confidence 012344444444444455555555555554444444444433332 2235555555555555555555555555444
Q ss_pred HHHHH
Q 008400 523 KTLKE 527 (567)
Q Consensus 523 ~~~~~ 527 (567)
..+..
T Consensus 432 ~~~~~ 436 (530)
T 2ooe_A 432 IDYLS 436 (530)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 44433
No 269
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.04 E-value=3.3e-05 Score=78.21 Aligned_cols=108 Identities=9% Similarity=0.003 Sum_probs=89.6
Q ss_pred HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
....+..+...|..++..|++++|+..+.+++...+... ......+++++|.++...|++++|+..+.++
T Consensus 10 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 79 (373)
T 1hz4_A 10 DTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGW----------FYSRIVATSVLGEVLHCKGELTRSLALMQQT 79 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTC----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCc----------hhHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 344566677889999999999999999999998764221 1234556889999999999999999999999
Q ss_pred hccCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008400 475 LDLDSRN------VKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (567)
Q Consensus 475 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 512 (567)
+.+.+.. ..+++++|.++..+|++++|+..|++++++.
T Consensus 80 l~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~ 123 (373)
T 1hz4_A 80 EQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLI 123 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 9876533 3457899999999999999999999999985
No 270
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=98.01 E-value=5.2e-06 Score=85.91 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=73.5
Q ss_pred CCCCCCEEEEEEEEEEcCCCEEeecCCCCCcEEEEccCCcchHHHHHHhcccccccEEEEEecCCcccCCCCCCCCCCCC
Q 008400 52 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPN 131 (567)
Q Consensus 52 ~~~~gd~V~v~Y~~~~~~g~~~~~t~~~~~p~~~~lG~~~~i~gl~~~l~~m~~Ge~~~i~ip~~~ayg~~~~~~~ip~~ 131 (567)
.+..||.|.|+|+++ .||..|+++.. .++.|.+|.+. + |+++|.||++|+.++|.+.+ +|
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~~--~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vtF--------------aG 213 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSRE--YEYVISEDEDR--P-FVKDLVGKKKGDVVEIEREY--------------EG 213 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEEE--EEEECCSSCCC--T-THHHHTTCCTTCEEEEEEEE--------------TT
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCCC--CCeEEEecCCc--h-HHHHhCCCCCCceEEEEEee--------------CC
Confidence 467899999999988 59999998754 68889999887 3 99999999999999999855 35
Q ss_pred CcEEEEEEEEEEeeccccccccceeeee
Q 008400 132 ATLQFDVELLSWTSVKDICKDGGIIKKI 159 (567)
Q Consensus 132 ~~l~~~vel~~~~~~~~~~~d~~~~~~i 159 (567)
.+..|.|+|.+++......-+..+++.+
T Consensus 214 k~a~F~VtV~~Ik~~~lPEldDEfak~~ 241 (433)
T 3gty_X 214 KKYTYKLEVEEVYKRTLPEIGDELAKSV 241 (433)
T ss_dssp EEEEEEEEEEEEEEECCCCSSHHHHHTT
T ss_pred CeEEEEEEEEEEEEecCCcccHHHHHHh
Confidence 8999999999999876666666666644
No 271
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.95 E-value=4.7e-05 Score=87.54 Aligned_cols=107 Identities=16% Similarity=0.136 Sum_probs=89.2
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC-
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS- 479 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p- 479 (567)
.+...|..++..|+|++|+..|.+|- .|..+|.|+.++|+|++|++.+.+|...++
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 45679999999999999999999873 188999999999999999999999955433
Q ss_pred ------------------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 480 ------------------------RNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 480 ------------------------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
.++..+..++..|...|.|++|+..|+++|.++|.+.....++..+..+.+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 134456677888999999999999999999999999888888877755543
No 272
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.95 E-value=5.1e-05 Score=63.62 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=69.9
Q ss_pred HHHhhHHHHHHhccC---HHHHHHHHHHHhccCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008400 449 ACNLNNAACKLKLKD---YKQAEKLCTKVLDLDSR-NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (567)
Q Consensus 449 ~~~~nla~~~~k~~~---~~~Ai~~~~~al~~~p~-~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~ 524 (567)
...+|+|-|..+.++ ...+|..+...++.+|. .-..+|.+|.+++++|+|++|+.+++.+|+++|+|..+..+...
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 346788888877764 56799999999988884 47899999999999999999999999999999999988888777
Q ss_pred HHHHHH
Q 008400 525 LKEKMK 530 (567)
Q Consensus 525 ~~~~~~ 530 (567)
+..++.
T Consensus 121 Ie~ki~ 126 (134)
T 3o48_A 121 VEDKIQ 126 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766665
No 273
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.94 E-value=9.9e-05 Score=62.69 Aligned_cols=81 Identities=16% Similarity=0.214 Sum_probs=68.9
Q ss_pred HHHhhHHHHHHhccC---HHHHHHHHHHHhccCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008400 449 ACNLNNAACKLKLKD---YKQAEKLCTKVLDLDSR-NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKT 524 (567)
Q Consensus 449 ~~~~nla~~~~k~~~---~~~Ai~~~~~al~~~p~-~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~ 524 (567)
...+|+|-|..+..+ -.++|..++..+..+|. .-..+|.+|.+++++|+|++|+.+++..|+++|+|..+..+...
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 346788888888764 45799999999998884 57899999999999999999999999999999999888887777
Q ss_pred HHHHH
Q 008400 525 LKEKM 529 (567)
Q Consensus 525 ~~~~~ 529 (567)
+..++
T Consensus 120 Ie~~i 124 (144)
T 1y8m_A 120 VEDKI 124 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 274
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.91 E-value=6.2e-05 Score=64.89 Aligned_cols=94 Identities=16% Similarity=0.030 Sum_probs=79.8
Q ss_pred cCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH
Q 008400 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (567)
Q Consensus 412 ~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a 491 (567)
.+++.+|+..|++|.+... .. ++ +|.+|...+.+++|+.+++++.+. .++.+++++|.+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~--~~---------------a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~ 66 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNE--MF---------------GC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDF 66 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTC--TT---------------HH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCC--Hh---------------hh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 3678999999999997642 11 13 999999999999999999999986 789999999999
Q ss_pred HHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008400 492 YIQ----MADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 492 ~~~----l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 528 (567)
|.. .+++++|+.+|++|.+. .+..+...|..+...
T Consensus 67 y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 67 YENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 999 89999999999999987 677777777777554
No 275
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.88 E-value=3.9e-05 Score=78.87 Aligned_cols=106 Identities=17% Similarity=0.144 Sum_probs=61.0
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc----
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD---- 476 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~---- 476 (567)
.+...|+.++..|+|++|+..|.++ +. |.++|.|+.++|+|++|++.+.++..
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n---------------~~~LA~~L~~Lg~yq~AVea~~KA~~~~~W 180 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------SN---------------FGRLASTLVHLGEYQAAVDGARKANSTRTW 180 (449)
T ss_dssp -------------CTTTHHHHHHHT--------TC---------------HHHHHHHHHTTTCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------hh---------------HHHHHHHHHHhccHHHHHHHHHHcCCchhH
Confidence 4455555555555555555555544 11 45555555555555555555555511
Q ss_pred ----------------------cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008400 477 ----------------------LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMK 530 (567)
Q Consensus 477 ----------------------~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~ 530 (567)
+. .++.-+..+..+|...|++++|+..|++++.+++.+..+..++..+..+.+
T Consensus 181 k~v~~aCv~~~ef~lA~~~~l~L~-~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 181 KEVCFACVDGKEFRLAQMCGLHIV-VHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp HHHHHHHHHTTCHHHHHHTTTTTT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHH-hCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 10 223334456678999999999999999999999999888888877755543
No 276
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.82 E-value=0.00015 Score=76.66 Aligned_cols=93 Identities=17% Similarity=0.063 Sum_probs=52.6
Q ss_pred HhhhhhhhhHHHh----cCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh----ccCHHHHHHH
Q 008400 399 AGKKKEQGNTLFK----AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK----LKDYKQAEKL 470 (567)
Q Consensus 399 a~~~~~~G~~~~~----~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k----~~~~~~Ai~~ 470 (567)
+..+...|..++. .+++.+|+..|++|++... ..+++++|.+|.. .+++++|+.+
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~-----------------~~a~~~Lg~~y~~g~g~~~~~~~A~~~ 101 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGY-----------------TPAEYVLGLRYMNGEGVPQDYAQAVIW 101 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC-----------------HHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCC-----------------HHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 4556677777777 7888888888888876411 1124445555554 4555555555
Q ss_pred HHHHhccCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHH
Q 008400 471 CTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALE 510 (567)
Q Consensus 471 ~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~ 510 (567)
+.++.+. .++.+++++|.+|.. .+++++|+.+|++|.+
T Consensus 102 ~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 102 YKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 5555442 344555555555544 4455555555555444
No 277
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.78 E-value=0.00013 Score=63.38 Aligned_cols=79 Identities=15% Similarity=0.098 Sum_probs=64.4
Q ss_pred HhhhhhhhhHHHhcC---cHHHHHHHHHHHHHhh-hccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 399 AGKKKEQGNTLFKAG---KYARASKRYEKAVKYI-EYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 399 a~~~~~~G~~~~~~g---~~~~A~~~y~~al~~~-~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
.+..++.|..+.+.. ++++|+..++..++.. | .....+++|+|..|+++++|.+|+++|+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p--------------~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~l 97 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSK--------------EEQRDYVFYLAVGNYRLKEYEKALKYVRGL 97 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCH--------------HHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc--------------cchHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 355677788888877 7889999999988754 2 134567899999999999999999999999
Q ss_pred hccCCCCHHHHHHHHHH
Q 008400 475 LDLDSRNVKALYRRAQA 491 (567)
Q Consensus 475 l~~~p~~~ka~~~~a~a 491 (567)
|+++|+|..|..-+-.+
T Consensus 98 L~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 98 LQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHCTTCHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHH
Confidence 99999998887655443
No 278
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.00015 Score=74.68 Aligned_cols=121 Identities=14% Similarity=0.144 Sum_probs=91.4
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCC------------------CChHHHHH-HH---------
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTS------------------FGDEEKKQ-AK--------- 444 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~------------------~~~e~~~~-~~--------- 444 (567)
.........+.+.|..+++.|+|++|+..|.+++.+.+.... ...+.... .+
T Consensus 49 ~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 49 KRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 344455667889999999999999999999998876543211 01111111 11
Q ss_pred ---HHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 008400 445 ---ALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL------DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDP 513 (567)
Q Consensus 445 ---~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 513 (567)
.+...++.++|.+|..+|+|.+|+..+.+++.. .+....++...+++|..+++|++|...|++++.+.+
T Consensus 129 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 129 KRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp SCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 123567889999999999999999999998765 233367999999999999999999999999998753
No 279
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.75 E-value=8.8e-05 Score=77.70 Aligned_cols=121 Identities=17% Similarity=0.027 Sum_probs=74.8
Q ss_pred hhhhhhhHHHhcC---cHHHHHHHHHHHHHhhhccCCC--------------ChHHHHHHH------HHHHHHHhhHHHH
Q 008400 401 KKKEQGNTLFKAG---KYARASKRYEKAVKYIEYDTSF--------------GDEEKKQAK------ALKVACNLNNAAC 457 (567)
Q Consensus 401 ~~~~~G~~~~~~g---~~~~A~~~y~~al~~~~~~~~~--------------~~e~~~~~~------~~~~~~~~nla~~ 457 (567)
.+...|..+.+.| ++.+|+..|++|+...+..... ..+...... .-...+++++|.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~g~~~a~~~Lg~~ 257 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQL 257 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHGGGSTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4567788888888 9999999999998764432210 000001111 1123346666766
Q ss_pred -H--HhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008400 458 -K--LKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA-----DLDLAEFDIKKALEIDPDNRDVKLEYKTLKE 527 (567)
Q Consensus 458 -~--~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~-----~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 527 (567)
+ ...+++++|+.+++++++. .++.+++++|.+|. .| ++++|+.+|++|. |.+..+...+..+..
T Consensus 258 ~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 258 LYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp HHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence 3 3566777777777777653 36777777777766 44 7777777777776 666666666665543
No 280
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.75 E-value=0.00013 Score=70.07 Aligned_cols=86 Identities=15% Similarity=0.003 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc-----cCHHHHHHHHHHHhccCCCC-HHHHHHHH
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL-----KDYKQAEKLCTKVLDLDSRN-VKALYRRA 489 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~-----~~~~~Ai~~~~~al~~~p~~-~ka~~~~a 489 (567)
..|....++|+++.+. -+...+|.-+|..|.+. |+.++|..++++||+++|+. ..+++..|
T Consensus 180 ~~A~a~lerAleLDP~-------------~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA 246 (301)
T 3u64_A 180 HAAVMMLERACDLWPS-------------YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYA 246 (301)
T ss_dssp HHHHHHHHHHHHHCTT-------------HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-------------cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHH
Confidence 4555555666655543 12345788999999996 99999999999999999975 99999999
Q ss_pred HHHHhc-CCHHHHHHHHHHHHHhCCC
Q 008400 490 QAYIQM-ADLDLAEFDIKKALEIDPD 514 (567)
Q Consensus 490 ~a~~~l-~~~~~A~~~~~~al~l~P~ 514 (567)
..++.. +++++|...+++|+..+|.
T Consensus 247 ~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 247 DALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 999885 9999999999999999877
No 281
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.73 E-value=0.00011 Score=75.88 Aligned_cols=64 Identities=9% Similarity=-0.057 Sum_probs=55.4
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccC------CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLD------SRNVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
..++.+++.++...++++.|+..|.+++... +...+++.++|.+|..+|+|++|+..+++++..
T Consensus 95 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~ 164 (434)
T 4b4t_Q 95 KVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLRE 164 (434)
T ss_dssp HHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHH
Confidence 3456788999999999999999999998753 233789999999999999999999999999876
No 282
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.70 E-value=0.00027 Score=61.74 Aligned_cols=117 Identities=13% Similarity=0.109 Sum_probs=87.4
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-ChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC-
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-GDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD- 478 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~- 478 (567)
.+++....++..+.|+.|+-.+..++.+...+... + -.....++..+|..++..++|.+|...|++||...
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k 94 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKK 94 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 46778889999999999999999999887655432 2 13455668899999999999999999999997642
Q ss_pred --CCC----------------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 479 --SRN----------------------VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 479 --p~~----------------------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
+.+ ...-|+.|.||..++++++|+..++..-. .-.+..+.-.|+++
T Consensus 95 ~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakL 164 (167)
T 3ffl_A 95 ALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANL 164 (167)
T ss_dssp CC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHH
T ss_pred HHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHH
Confidence 111 25779999999999999999998775321 11344454445443
No 283
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.69 E-value=0.00036 Score=69.81 Aligned_cols=112 Identities=13% Similarity=-0.007 Sum_probs=81.1
Q ss_pred hhhhHHHh---cCcHHHHHHHHHHHHHhhhccCCC-----------------ChHHHHHHHHH------------HHHHH
Q 008400 404 EQGNTLFK---AGKYARASKRYEKAVKYIEYDTSF-----------------GDEEKKQAKAL------------KVACN 451 (567)
Q Consensus 404 ~~G~~~~~---~g~~~~A~~~y~~al~~~~~~~~~-----------------~~e~~~~~~~~------------~~~~~ 451 (567)
-+|..++. ...+.+|+.+|++|+++.|..... ........... ...+|
T Consensus 201 Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~ 280 (372)
T 3ly7_A 201 YQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIY 280 (372)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHH
Confidence 34444443 344689999999999987753211 11111111111 11234
Q ss_pred hhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 452 LNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 452 ~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
.-+|..++..|++++|+..+++|+.++| +.-+|..+|.++...|++++|++.|.+|+.++|...
T Consensus 281 ~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 281 QIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 4567777788999999999999999996 477889999999999999999999999999999874
No 284
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.61 E-value=0.00019 Score=82.57 Aligned_cols=107 Identities=12% Similarity=-0.027 Sum_probs=82.4
Q ss_pred hhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCC--hHHHHHH-----HHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFG--DEEKKQA-----KALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~--~e~~~~~-----~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
+.|..+...|.|++|+..|+++-.......... -...+.. +-....+|+++|.++.+.|+|++|+..|.+|
T Consensus 1054 eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1054 DIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 348889999999999999999753322100000 0011111 1123568999999999999999999999886
Q ss_pred cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 477 LDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 477 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
+++.+|++.|.++..+|+|++|+++|..|.+.+++.
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES 1167 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc
Confidence 789999999999999999999999999999988553
No 285
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.59 E-value=0.00023 Score=74.56 Aligned_cols=74 Identities=20% Similarity=0.070 Sum_probs=63.2
Q ss_pred HHHHhhHHHHHHhcc-----CHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHH
Q 008400 448 VACNLNNAACKLKLK-----DYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ----MADLDLAEFDIKKALEIDPDNRDV 518 (567)
Q Consensus 448 ~~~~~nla~~~~k~~-----~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~n~~~ 518 (567)
..+++|+|.+|. .| ++.+|+.+|.++. +.++.+++++|.+|.. ..++++|+.+|++|.+. .+..+
T Consensus 283 ~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A 356 (452)
T 3e4b_A 283 PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSA 356 (452)
T ss_dssp HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTH
T ss_pred HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHH
Confidence 456889999998 55 9999999999999 8999999999999988 45999999999999975 45557
Q ss_pred HHHHHHHHH
Q 008400 519 KLEYKTLKE 527 (567)
Q Consensus 519 ~~~l~~~~~ 527 (567)
...|..+..
T Consensus 357 ~~~Lg~~y~ 365 (452)
T 3e4b_A 357 DFAIAQLFS 365 (452)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777754
No 286
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.42 E-value=0.00029 Score=69.15 Aligned_cols=99 Identities=12% Similarity=0.024 Sum_probs=77.9
Q ss_pred hhhHHHhcC--cHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc-----
Q 008400 405 QGNTLFKAG--KYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL----- 477 (567)
Q Consensus 405 ~G~~~~~~g--~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~----- 477 (567)
.|...+..| ++++|...|+++....+. .....+++| |++++|+|++|...++.+++.
T Consensus 182 ea~v~l~~g~~~~q~A~~~f~El~~~~p~-------------~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~ 245 (310)
T 3mv2_B 182 ESYIKFATNKETATSNFYYYEELSQTFPT-------------WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVE 245 (310)
T ss_dssp HHHHHHHHTCSTTTHHHHHHHHHHTTSCS-------------HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTT
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhCCC-------------cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhccccc
Confidence 343344445 899999999998765442 001122444 899999999999999988876
Q ss_pred -----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008400 478 -----DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLE 521 (567)
Q Consensus 478 -----~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~ 521 (567)
+|+++.++.++..+...+|+ +|.+.+.++.+++|+++.+...
T Consensus 246 ~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~ 292 (310)
T 3mv2_B 246 QKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHH 292 (310)
T ss_dssp TCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHH
Confidence 58899999999999999998 9999999999999999765443
No 287
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.26 E-value=0.00073 Score=66.26 Aligned_cols=121 Identities=7% Similarity=-0.033 Sum_probs=86.9
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC-
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR- 480 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~- 480 (567)
+.-.|..++..|++++|++.+.+++...+.. ....++..++.+++++|+.+.|.+.+++..+.+|+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~-------------~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~ 169 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAE-------------GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDT 169 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCST-------------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCc-------------CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc
Confidence 3477888899999999999999997654310 12344677889999999999999999999888883
Q ss_pred ---CHHHHHHHHHH--HHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008400 481 ---NVKALYRRAQA--YIQMA--DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKE 536 (567)
Q Consensus 481 ---~~ka~~~~a~a--~~~l~--~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e 536 (567)
+-..+.+++.+ .+..| ++.+|...|+.+....|+......++. +..++++..+++
T Consensus 170 ~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe 231 (310)
T 3mv2_B 170 VSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQ 231 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHH
T ss_pred cccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHH
Confidence 23455555555 66556 899999999998888887333334444 555555555444
No 288
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.22 E-value=0.00078 Score=69.82 Aligned_cols=93 Identities=9% Similarity=-0.036 Sum_probs=73.1
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+.+.|..+..+|+|++|+..|+++|.......... +......++|+|..|..+|+|++|+.++.+|+
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 45688889999999999999999999999998865432211 24566779999999999999999999999998
Q ss_pred cc-----CCCCH---HHHHHHHHHHHhc
Q 008400 476 DL-----DSRNV---KALYRRAQAYIQM 495 (567)
Q Consensus 476 ~~-----~p~~~---ka~~~~a~a~~~l 495 (567)
++ -|+++ ..+.+++.++..+
T Consensus 399 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 399 DIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 75 45554 4555666666544
No 289
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.17 E-value=0.0054 Score=62.54 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=94.8
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccC-------CCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHH
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDT-------SFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKL 470 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~-------~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~ 470 (567)
....+...|......++...|+..+.+|+.+..... .+...+.....+.+..+...++.+++.+|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 345555667777778999999999999999865322 1223455677788888899999999999999999999
Q ss_pred HHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 471 CTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 471 ~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
+.+++..+|-+..++..+-.+|...|+..+|+..|+++-+
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988755
No 290
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.15 E-value=0.00062 Score=54.15 Aligned_cols=68 Identities=19% Similarity=0.131 Sum_probs=57.3
Q ss_pred HhhhhhhhhHHHhcCc---HHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 399 AGKKKEQGNTLFKAGK---YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~---~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
+..+...|..++..++ ..+|...+++|+...|.+... ++.+|..+++.|+|.+|+.++++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA---------------~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAA---------------LSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHH---------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHH---------------HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3456677788875555 799999999999998876533 7889999999999999999999999
Q ss_pred ccCCCC
Q 008400 476 DLDSRN 481 (567)
Q Consensus 476 ~~~p~~ 481 (567)
+.+|..
T Consensus 71 ~~~p~~ 76 (93)
T 3bee_A 71 DSNDPN 76 (93)
T ss_dssp TCCCTT
T ss_pred hhCCCC
Confidence 999984
No 291
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.11 E-value=0.0011 Score=68.66 Aligned_cols=80 Identities=11% Similarity=-0.013 Sum_probs=65.5
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVL 475 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al 475 (567)
...+..+.+.|..+..+|+|++|+..|+++|.......... +......++|+|..|..+|+|++|+..+++||
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 44677888999999999999999999999999866433221 24456679999999999999999999999998
Q ss_pred cc-----CCCCH
Q 008400 476 DL-----DSRNV 482 (567)
Q Consensus 476 ~~-----~p~~~ 482 (567)
++ -|+++
T Consensus 410 ~i~~~~lG~~Hp 421 (433)
T 3qww_A 410 AIMEVAHGKDHP 421 (433)
T ss_dssp HHHHHHTCTTCH
T ss_pred HHHHHHcCCCCh
Confidence 75 45654
No 292
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.08 E-value=0.00087 Score=64.44 Aligned_cols=66 Identities=11% Similarity=0.043 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHhccCCC--CHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Q 008400 463 DYKQAEKLCTKVLDLDSR--NVKALYRRAQAYIQM-----ADLDLAEFDIKKALEIDPDN-RDVKLEYKTLKEK 528 (567)
Q Consensus 463 ~~~~Ai~~~~~al~~~p~--~~ka~~~~a~a~~~l-----~~~~~A~~~~~~al~l~P~n-~~~~~~l~~~~~~ 528 (567)
....|....++|+++||+ +..||.-+|..|..+ |+.++|...|++|++++|+. .++...+......
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 468899999999999999 677999999999996 99999999999999999974 7777777765433
No 293
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.73 E-value=0.0083 Score=50.06 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=39.6
Q ss_pred HHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH
Q 008400 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (567)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a 491 (567)
.+..+++.+|..++++|+|..|+.+|+.+|+.+|+|..|.-.+..+
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3556788999999999999999999999999999998886655443
No 294
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.72 E-value=0.0055 Score=62.92 Aligned_cols=143 Identities=13% Similarity=0.044 Sum_probs=98.7
Q ss_pred hHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc------cCCCChHHHHHHHH----HHHHHHhhHHHHHHhc
Q 008400 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY------DTSFGDEEKKQAKA----LKVACNLNNAACKLKL 461 (567)
Q Consensus 392 ~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~------~~~~~~e~~~~~~~----~~~~~~~nla~~~~k~ 461 (567)
...-...+..+...|..+++.|+|++|++.|.+|.....- +....+-+..+.-. ....-...+..+|.++
T Consensus 141 A~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~ 220 (449)
T 1b89_A 141 AKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDR 220 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHC
Confidence 3445567788899999999999999999999999422000 00000000000000 0000122466789999
Q ss_pred cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHHHHHHH
Q 008400 462 KDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQ--MADLDLAEFDIKKALEIDP-----DNRDVKLEYKTLKEKMKEYNK 534 (567)
Q Consensus 462 ~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~--l~~~~~A~~~~~~al~l~P-----~n~~~~~~l~~~~~~~~~~~~ 534 (567)
|+|++|+..++++|.+++.+...+..+|.+|.+ .++..++++.|...+.+.| .+...+.++..+.....+...
T Consensus 221 G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~ 300 (449)
T 1b89_A 221 GYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDN 300 (449)
T ss_dssp TCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHH
Confidence 999999999999999999999999999888776 5678889998888887777 666667777666555555443
No 295
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.58 E-value=0.016 Score=48.56 Aligned_cols=45 Identities=13% Similarity=0.203 Sum_probs=39.2
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQA 491 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a 491 (567)
+..+++.+|..++|+|+|..|+++|+.+|+.+|+|..|.-.+..+
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 556788999999999999999999999999999998886655443
No 296
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.53 E-value=0.0095 Score=52.02 Aligned_cols=94 Identities=18% Similarity=0.179 Sum_probs=63.6
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCCh----------HHHHHHHHHHHHHHhhHHHHHHhccCHHHH
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD----------EEKKQAKALKVACNLNNAACKLKLKDYKQA 467 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~----------e~~~~~~~~~~~~~~nla~~~~k~~~~~~A 467 (567)
.++.+...|+.+|.+++|.+|...|++||........... .........-..+.+.+|.||.+++++.+|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 4667788999999999999999999999987553211100 000000001224567899999999999999
Q ss_pred HHHHHHHhccCCCCHHHHHHHHHHH
Q 008400 468 EKLCTKVLDLDSRNVKALYRRAQAY 492 (567)
Q Consensus 468 i~~~~~al~~~p~~~ka~~~~a~a~ 492 (567)
+...+.+-. ...+++.-.-+|+.|
T Consensus 142 i~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 998766422 234678877777765
No 297
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.50 E-value=0.026 Score=47.88 Aligned_cols=44 Identities=14% Similarity=0.206 Sum_probs=38.3
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQ 490 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~ 490 (567)
+..|++.+|..++|+|+|..|.++|+.+|+.+|+|..|.-.+..
T Consensus 76 ~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 76 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 45678899999999999999999999999999999877655443
No 298
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=96.50 E-value=0.0048 Score=63.64 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=58.5
Q ss_pred CCCCCCeEEEEEEEEeCCCeEeeec--cceEEEecCCCCcchHHHHHhhccCCcEEEEEecCCCccCCCCCCCCCCCCCC
Q 008400 168 NPKDLDEVLVNYEARLEDGMVVGKA--DGVEFTVKDGHFCPTLAKAVKTMKKGEKVLLAVKPQYGFGEKGKSASGNEGAV 245 (567)
Q Consensus 168 ~~~~~d~V~v~y~~~~~~g~~~~~~--~~~~~~~g~~~~~~gl~~~l~~m~~Ge~~~i~ip~~~~~g~~~~~~~~~~~~i 245 (567)
....||.|+++|.+.. ||..|+++ .++.+.+|.+. + |+++|.||+.|++++|.+ .|
T Consensus 154 ~a~~gD~V~id~~~~~-dG~~~~~~~~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~v----tF-------------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYN-EEGKKLTSREYEYVISEDEDR--P-FVKDLVGKKKGDVVEIER----EY-------------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEEC-TTSCEEEEEEEEEECCSSCCC--T-THHHHTTCCTTCEEEEEE----EE--------------
T ss_pred ccCCCCEEEEEEEEEE-CCEECcCCCCCCeEEEecCCc--h-HHHHhCCCCCCceEEEEE----ee--------------
Confidence 3568999999999984 88888876 56677788776 4 999999999999999998 23
Q ss_pred CCCCeEEEEEEeecccc
Q 008400 246 PPNATLQIALELVSWKT 262 (567)
Q Consensus 246 p~~~~l~~~v~l~~~~~ 262 (567)
++.+..|.|.+..+..
T Consensus 212 -aGk~a~F~VtV~~Ik~ 227 (433)
T 3gty_X 212 -EGKKYTYKLEVEEVYK 227 (433)
T ss_dssp -TTEEEEEEEEEEEEEE
T ss_pred -CCCeEEEEEEEEEEEE
Confidence 2457899999987643
No 299
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.30 E-value=0.063 Score=58.75 Aligned_cols=142 Identities=11% Similarity=0.047 Sum_probs=83.2
Q ss_pred hhhhHHHhcCcHHHHHHHHHHHHHhhhcc-------CCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 404 EQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~-------~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
..+......|++++|...|++++..++.. ...+++...........++...+....+.++.+.|...+.+|++
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34444556788999999999999865310 01111122222222334566666666677777888888888877
Q ss_pred c-CCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 477 L-DSRNVKALYRRAQAYIQMA-DLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 477 ~-~p~~~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
. .+...+.|...|..-...+ +++.|.+.|+++++..|++......+.......++ ..+.++.|.+....
T Consensus 463 ~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~-~~~AR~lferal~~ 533 (679)
T 4e6h_A 463 LKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE-ESQVKSLFESSIDK 533 (679)
T ss_dssp TGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-HHHHHHHHHHHTTT
T ss_pred hcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC-HHHHHHHHHHHHHh
Confidence 6 4444566666665555554 37778888888888777777666555444333322 22334455544443
No 300
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.99 E-value=0.024 Score=62.00 Aligned_cols=134 Identities=14% Similarity=0.065 Sum_probs=96.4
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc-CHHHHHHHHHHHhccCCC
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~-~~~~Ai~~~~~al~~~p~ 480 (567)
+...++...+.++.+.|...|.+|+...+... ..+|...|....+.+ +++.|...|+++|+..|+
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~--------------~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~ 502 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT--------------PDIYLENAYIEYHISKDTKTACKVLELGLKYFAT 502 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC--------------THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC--------------hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCC
Confidence 33444444556888999999999997733221 123555566666654 599999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhc
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD---NRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMKSR 550 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~---n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~~~ 550 (567)
++..+...+......++.+.|+..|++|+...|+ ...+...+.......+.. +.-++.++++.......
T Consensus 503 ~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~-~~~~~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 503 DGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSL-NSVRTLEKRFFEKFPEV 574 (679)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHSTTC
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCC
Confidence 9998888888888999999999999999999884 445555555555544332 23456777777666543
No 301
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=95.67 E-value=0.33 Score=46.98 Aligned_cols=114 Identities=16% Similarity=0.285 Sum_probs=80.6
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhc--cCH-----HHHHHHHHHH
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKL--KDY-----KQAEKLCTKV 474 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~--~~~-----~~Ai~~~~~a 474 (567)
....|..++..|+|.+|+..|+..|..++-....+.++.++.+++...|...+-.+-+.+ +.. +...+.++-+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 468899999999999999999999999987777777788888887776665554433333 221 3333333333
Q ss_pred -----hccCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 475 -----LDLDSRNVKALYRRA-QAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 475 -----l~~~p~~~ka~~~~a-~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
..+.|.|.---+|.| ...++.++|.-|....++.|++.|..
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 231 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKP 231 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 233444433333444 35778899999999999999998864
No 302
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=95.65 E-value=0.074 Score=51.55 Aligned_cols=117 Identities=15% Similarity=0.092 Sum_probs=79.1
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCH----HHHHHHHHHH-
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDY----KQAEKLCTKV- 474 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~----~~Ai~~~~~a- 474 (567)
....+.|..++..|+|.+|+..|+..|..++-....+.++.++.+++...|...+-.+-+.+.+= +...+.++-+
T Consensus 115 ~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAA 194 (325)
T 3mv2_A 115 NEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAA 194 (325)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence 33566899999999999999999999999887766667777788777766655444443333211 1112222222
Q ss_pred ----hccCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 008400 475 ----LDLDSRNVKALYRRA-QAYIQMADLDLAEFDIKKALEIDPDNR 516 (567)
Q Consensus 475 ----l~~~p~~~ka~~~~a-~a~~~l~~~~~A~~~~~~al~l~P~n~ 516 (567)
..+.|.+.---+|.| ...++.++|.-|....++.|++.|..+
T Consensus 195 YFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 195 YFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp HGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred HhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 233444433333444 357788999999999999999999754
No 303
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.55 E-value=0.21 Score=42.70 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhc
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQM 495 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l 495 (567)
++-+..|++|+...|.... ....-.+.++.+.|.- ...++.++|.+.|+.++.+....++.|...|+--...
T Consensus 36 ~rlrd~YerAia~~Pp~k~-------~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRq 107 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKY-------GQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQ 107 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGG-------TTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCcccc-------ccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 7778899999998876421 1113344455566643 5669999999999999998888899999999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCHH
Q 008400 496 ADLDLAEFDIKKALEIDPDNRD 517 (567)
Q Consensus 496 ~~~~~A~~~~~~al~l~P~n~~ 517 (567)
|+...|++.+.+|+.+.|....
T Consensus 108 gnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 108 GNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp TCHHHHHHHHHHHHHTTCBCHH
T ss_pred ccHHHHHHHHHHHhccCCCcHH
Confidence 9999999999999999999843
No 304
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=94.98 E-value=0.17 Score=50.41 Aligned_cols=125 Identities=9% Similarity=-0.012 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHH----------HHHHHHHHHhhHHHHHHhccCH-----------HHHHHHHHHH
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQ----------AKALKVACNLNNAACKLKLKDY-----------KQAEKLCTKV 474 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~----------~~~~~~~~~~nla~~~~k~~~~-----------~~Ai~~~~~a 474 (567)
-.|..+|-++..++.... .+...+ ..+-...++..++.||.-+..+ ..|+. ...+
T Consensus 194 ~~Aydl~Lra~~~l~~~~---~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~-a~~a 269 (372)
T 3ly7_A 194 GALLTNFYQAHDYLLHGD---DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEID-NIVT 269 (372)
T ss_dssp GGGHHHHHHHHHHHHHCS---HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HHHT
T ss_pred HHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHH-HHHh
Confidence 367788888877765421 222222 2222344667777777632211 12222 1123
Q ss_pred hccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh
Q 008400 475 LDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 475 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
+..+|.++.++..+|.++...|++++|+..+++|+.++|+ ......++.+....++.+++. ..|.+.|..
T Consensus 270 ~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~-e~~~~AlrL 339 (372)
T 3ly7_A 270 LPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAA-DAYLTAFNL 339 (372)
T ss_dssp CGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHH-HHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHH-HHHHHHHhc
Confidence 4677999999999999999999999999999999999975 566677787777666665544 355555543
No 305
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.82 E-value=0.24 Score=50.12 Aligned_cols=98 Identities=15% Similarity=0.031 Sum_probs=79.6
Q ss_pred hhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC---CC
Q 008400 404 EQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD---SR 480 (567)
Q Consensus 404 ~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~---p~ 480 (567)
..|..++..|+|.+|++.+.+.++.+..... ......+|......|..++++.++...+.+|.... +.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 6788999999999999999999998765332 36778889999999999999999999999986542 12
Q ss_pred C--H--HHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Q 008400 481 N--V--KALYRRAQAYI-QMADLDLAEFDIKKALE 510 (567)
Q Consensus 481 ~--~--ka~~~~a~a~~-~l~~~~~A~~~~~~al~ 510 (567)
+ . +...--|..|+ ..++|..|..+|-.+++
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 2 2 33445588899 89999999999988874
No 306
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.80 E-value=0.18 Score=55.32 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=53.2
Q ss_pred HHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 008400 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKA 508 (567)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~a 508 (567)
++.-.|.-.+..++|+-|+..+++|...-|.....|+++|.||..+++|+.|+-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44455666778899999999999999999999999999999999999999999888776
No 307
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.44 E-value=0.46 Score=41.31 Aligned_cols=95 Identities=16% Similarity=0.119 Sum_probs=67.8
Q ss_pred hhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc--cC----
Q 008400 405 QGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD--LD---- 478 (567)
Q Consensus 405 ~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~--~~---- 478 (567)
.+-.+|-.|+|.+|+-+.. .... .+..+.-+.||.++++|..|+......|+ .+
T Consensus 39 ~~I~LyyngEY~R~Lf~L~-------~lNT-------------~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~ 98 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLH-------KLNT-------------CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPD 98 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHH-------TCCB-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCC
T ss_pred hhhhhhhcchHhHHHHHHH-------hcch-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcc
Confidence 4556667777766654433 2221 22355679999999999999999999983 22
Q ss_pred -----------CCCHHHHH-HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 008400 479 -----------SRNVKALY-RRAQAYIQMADLDLAEFDIKKALEIDPDNRDVK 519 (567)
Q Consensus 479 -----------p~~~ka~~-~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~ 519 (567)
|.+-..++ .+|..+..+|+-++|+..+......+|--..+.
T Consensus 99 ~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 99 VDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp CCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 33334433 569999999999999999999998887655544
No 308
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.85 E-value=0.86 Score=47.69 Aligned_cols=119 Identities=13% Similarity=0.027 Sum_probs=80.9
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC-------C--hHHHHHH----------------HHHHHHHHhhHHH
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF-------G--DEEKKQA----------------KALKVACNLNNAA 456 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~-------~--~e~~~~~----------------~~~~~~~~~nla~ 456 (567)
+...+..+...|+.+.|...|.+|+.. |.+... . ++....+ ......++.+.+.
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~ 294 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLN 294 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHH
Confidence 445566667789999999999999998 654311 0 0000000 0112345666777
Q ss_pred HHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008400 457 CKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMA-DLDLAEFDIKKALEIDPDNRDVKLEY 522 (567)
Q Consensus 457 ~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~P~n~~~~~~l 522 (567)
...+.+..+.|...+.+| ...+.....|...|..-...+ +.+.|+..|+.+++..|++......+
T Consensus 295 ~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~y 360 (493)
T 2uy1_A 295 YVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEF 360 (493)
T ss_dssp HHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 777788999999999999 433335566666666666555 69999999999999999987654433
No 309
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.67 E-value=0.2 Score=51.59 Aligned_cols=100 Identities=12% Similarity=-0.011 Sum_probs=78.7
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc---
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL--- 477 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~--- 477 (567)
.+...|.-+++.|++..|++.|.++........ .++.++++...+++..++|..|..+++++..+
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~------------~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG------------AKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC------------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH------------HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 466899999999999999999999887765432 24566888888999999999999999998554
Q ss_pred CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008400 478 DSRN---VKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (567)
Q Consensus 478 ~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 512 (567)
.++. .+.....|..++..++|.+|...|..++.-.
T Consensus 201 ~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 201 GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 2222 2344556788889999999999998877653
No 310
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.61 E-value=0.46 Score=44.89 Aligned_cols=69 Identities=12% Similarity=0.121 Sum_probs=62.2
Q ss_pred HHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 457 CKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 457 ~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
..++.+..++|+..+...++.+|.|.+.-..+.+.++-.|+|+.|.+.++.+.+++|+.......++.+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 456889999999999999999999999999999999999999999999999999999987666555544
No 311
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.83 E-value=1.1 Score=46.63 Aligned_cols=83 Identities=12% Similarity=0.010 Sum_probs=71.7
Q ss_pred HHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008400 446 LKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTL 525 (567)
Q Consensus 446 ~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 525 (567)
....++.++|....-...+..|..+|.+|+.+.|++..+|..+|..+...++.-+|.-+|-+++-...-...++..+..+
T Consensus 150 ~~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 150 ICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 34457788899888889999999999999999999999999999999999999999999999998876677676666655
Q ss_pred HHH
Q 008400 526 KEK 528 (567)
Q Consensus 526 ~~~ 528 (567)
..+
T Consensus 230 f~~ 232 (497)
T 1ya0_A 230 LSK 232 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 312
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=90.81 E-value=2.3 Score=42.83 Aligned_cols=134 Identities=13% Similarity=0.043 Sum_probs=89.2
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh-------------------ccCCCChHH---------HHH---HHHH
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE-------------------YDTSFGDEE---------KKQ---AKAL 446 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~-------------------~~~~~~~e~---------~~~---~~~~ 446 (567)
.-....+.|..+.+.|++++-.........++. ......+.. +.. ...+
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~fl 97 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888999999998887777654333322 111111111 100 1123
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhccCC----C--CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC---CCCHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDLDS----R--NVKALYRRAQAYIQMADLDLAEFDIKKALEID---PDNRD 517 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p----~--~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~---P~n~~ 517 (567)
+..+-.++|..|+..|+|.+|+..+.+.++.-. . -...+....+.|..++++.++...|.+|.... +-++.
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~ 177 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPK 177 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHH
Confidence 444566899999999999999999998876321 1 15677888999999999999999999998764 24555
Q ss_pred HHHHHHHHHHHHHH
Q 008400 518 VKLEYKTLKEKMKE 531 (567)
Q Consensus 518 ~~~~l~~~~~~~~~ 531 (567)
+...+..+.-....
T Consensus 178 i~a~i~~~~Gi~~l 191 (394)
T 3txn_A 178 VQGALDLQSGILHA 191 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHH
Confidence 66666655444333
No 313
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.50 E-value=1 Score=42.47 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=50.4
Q ss_pred hhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHH
Q 008400 406 GNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVK 483 (567)
Q Consensus 406 G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~k 483 (567)
...+++.|..++|+......++..|.+... ...+...++-.|+|++|.+.++.+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~P~da~~---------------R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKASPKDASL---------------RSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTTCHHH---------------HHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhCCcCHHH---------------HHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 356889999999999999999988765532 334455555679999999999999999998743
No 314
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.95 E-value=1.8 Score=45.27 Aligned_cols=126 Identities=9% Similarity=-0.061 Sum_probs=88.6
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc-CHHHHHHHHHHHhccCCC
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK-DYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~-~~~~Ai~~~~~al~~~p~ 480 (567)
+...+....+.++.+.|...|.+| . .+. . . ..+|...|...+..+ +.+.|...++.+++.-|+
T Consensus 289 w~~y~~~~~r~~~~~~AR~i~~~A-~-~~~-~--~-----------~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 289 RINHLNYVLKKRGLELFRKLFIEL-G-NEG-V--G-----------PHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHH-T-TSC-C--C-----------HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-h-CCC-C--C-----------hHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 344444444567799999999999 3 221 1 1 123444565555556 699999999999998899
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~ 548 (567)
.+..+...+.....+|+.+.|+..|+++ +....+...+.......+. .+.-++++.+++..+.
T Consensus 353 ~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~-~~~~r~v~~~~~~~~~ 415 (493)
T 2uy1_A 353 STLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVGS-MELFRELVDQKMDAIK 415 (493)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHhc
Confidence 8888777788888999999999999998 3456666666666555543 2334567777777665
No 315
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=89.90 E-value=0.54 Score=35.96 Aligned_cols=40 Identities=23% Similarity=0.171 Sum_probs=34.6
Q ss_pred ChHH-HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh
Q 008400 391 NTEE-KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (567)
Q Consensus 391 ~~~e-~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (567)
+..+ .+..|..+..+|...=+.|+|.+|+.+|..|++++.
T Consensus 2 ~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 2 SAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 4445 677889999999999999999999999999998754
No 316
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.56 E-value=3.9 Score=42.02 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=77.7
Q ss_pred HHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc-
Q 008400 398 AAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD- 476 (567)
Q Consensus 398 ~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~- 476 (567)
+|.-....+..++..|+|.+|.........-.-.... +..++.+++.....|+..++|.+|...++++..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~---------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSME---------MSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhccc---------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3444567788999999999999998887643221111 244666777888899999999999999998742
Q ss_pred --cCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 477 --LDSRN----VKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 477 --~~p~~----~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
-.+.+ ...+...|..+...++|.+|-.+|..++..
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 22333 244556788999999999999999988764
No 317
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=87.14 E-value=1.3 Score=36.25 Aligned_cols=44 Identities=25% Similarity=0.307 Sum_probs=37.0
Q ss_pred cCCChH-HHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc
Q 008400 388 WDMNTE-EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (567)
Q Consensus 388 ~~~~~~-e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (567)
..|+.. ..+..|..+..+|...=..++|.+|+.+|..|++++-.
T Consensus 6 ~~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~ 50 (117)
T 2cpt_A 6 SGMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 50 (117)
T ss_dssp CCSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 345555 67788999999999999999999999999999997653
No 318
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=85.89 E-value=0.77 Score=50.39 Aligned_cols=60 Identities=20% Similarity=0.182 Sum_probs=52.2
Q ss_pred hhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 400 GKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 400 ~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
.-+..++..+..+|+|+-|+..-++|+...|.... +|..||.||.++++|+.|+-.++-+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~---------------tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFE---------------SWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHH---------------HHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhH---------------HHHHHHHHHHHhccHHHHHHHHhcC
Confidence 35667788888999999999999999999886553 3899999999999999999888776
No 319
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=84.68 E-value=1.2 Score=33.98 Aligned_cols=41 Identities=24% Similarity=0.191 Sum_probs=35.1
Q ss_pred CCh-HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh
Q 008400 390 MNT-EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (567)
Q Consensus 390 ~~~-~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (567)
|++ ...+..|..+..+|...=+.|+|++|+.+|..|++++.
T Consensus 9 ~~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 9 MSAQVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 444 35568899999999999999999999999999998754
No 320
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=83.57 E-value=3.3 Score=43.11 Aligned_cols=81 Identities=10% Similarity=-0.057 Sum_probs=70.6
Q ss_pred HhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC
Q 008400 399 AGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD 478 (567)
Q Consensus 399 a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~ 478 (567)
-..+...|.....+..+..|...|.+|+.+.|..... |+-+|.++...+++-.|+-+|-++|...
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~---------------~nqLavla~~~~~~l~a~y~y~rsl~~~ 216 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQP---------------YNQLAILASSKGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHH---------------HHHHHHHHHHTTCHHHHHHHHHHHHSSS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCch---------------HHHHHHHHhcccccHHHHHHHHHHHhcC
Confidence 3466788988888899999999999999999987754 8899999999999999999999999988
Q ss_pred CCCHHHHHHHHHHHHh
Q 008400 479 SRNVKALYRRAQAYIQ 494 (567)
Q Consensus 479 p~~~ka~~~~a~a~~~ 494 (567)
...+.|.-++...+..
T Consensus 217 ~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 217 FPFPAASTNLQKALSK 232 (497)
T ss_dssp BCCHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHH
Confidence 7788888888777764
No 321
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=82.82 E-value=6.2 Score=41.21 Aligned_cols=99 Identities=5% Similarity=-0.042 Sum_probs=73.6
Q ss_pred hhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC-CCC
Q 008400 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-SRN 481 (567)
Q Consensus 403 ~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-p~~ 481 (567)
...-..+.+.|++++|.+.|.+..+.-- .. ....|+.+-.+|.+.|++++|...+++..+.. ..+
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~---~P-----------d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd 174 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGI---QP-----------RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE 174 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTC---CC-----------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCC---CC-----------ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC
Confidence 3444567788999999999988765311 00 12236677778889999999999999987653 235
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCC
Q 008400 482 VKALYRRAQAYIQMADLDLAEFDIKKALEI--DPDN 515 (567)
Q Consensus 482 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--~P~n 515 (567)
...|..+-.+|...|++++|.+.|++..+. .|+.
T Consensus 175 ~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~ 210 (501)
T 4g26_A 175 EPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 210 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCH
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCH
Confidence 678888889999999999999999987664 4554
No 322
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=82.51 E-value=9.4 Score=38.30 Aligned_cols=80 Identities=13% Similarity=-0.032 Sum_probs=60.4
Q ss_pred hHHHHHHhccCHHHHHHHHHHHhccCCC----------C------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 453 NNAACKLKLKDYKQAEKLCTKVLDLDSR----------N------------VKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 453 nla~~~~k~~~~~~Ai~~~~~al~~~p~----------~------------~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
..|......++...|+..+.+||.+... . ..++..++.+++.+|++.+|+..+.+++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3444444568899999999999887421 1 14566788899999999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHHHHH
Q 008400 511 IDPDNRDVKLEYKTLKEKMKEY 532 (567)
Q Consensus 511 l~P~n~~~~~~l~~~~~~~~~~ 532 (567)
.+|-+..++..+-.+..+..+.
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~ 221 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQ 221 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCH
T ss_pred hCCCCHHHHHHHHHHHHHcCCH
Confidence 9999988777776665444333
No 323
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=81.02 E-value=5.4 Score=35.09 Aligned_cols=26 Identities=12% Similarity=0.044 Sum_probs=16.1
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHH
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAV 426 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al 426 (567)
.++..|.....+|+++-|.++|.++-
T Consensus 36 ~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 36 TWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 45666666666666666666666543
No 324
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=81.00 E-value=4.6 Score=31.42 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=32.3
Q ss_pred HHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc
Q 008400 395 KIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (567)
.+..|..+..+|..+=+.|+|++|+.+|..|++++-.
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 4567888889999999999999999999999998653
No 325
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=80.09 E-value=1.7 Score=33.23 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=33.9
Q ss_pred CChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh
Q 008400 390 MNTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (567)
Q Consensus 390 ~~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (567)
|+....+..|..+..+|...=..|+|++|+.+|..|++++-
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 33334567788889999998899999999999999998754
No 326
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.58 E-value=2.8 Score=43.54 Aligned_cols=68 Identities=13% Similarity=0.014 Sum_probs=56.3
Q ss_pred HHHHhhHHHHHHhccCHHHHHHHHHHHhccCC--CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 448 VACNLNNAACKLKLKDYKQAEKLCTKVLDLDS--RN---VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 448 ~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p--~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
..+++-+-.+|+..+.|+.|....+++.--.. .| +..+|..|+++...++|.+|..+|..|++..|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 44566677899999999999999999953222 12 5678889999999999999999999999988865
No 327
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=78.80 E-value=11 Score=39.27 Aligned_cols=98 Identities=12% Similarity=0.051 Sum_probs=70.0
Q ss_pred cCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC-CCCHHHHHHHHH
Q 008400 412 AGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-SRNVKALYRRAQ 490 (567)
Q Consensus 412 ~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-p~~~ka~~~~a~ 490 (567)
.+.++.|.+.|.+....- ... ....|+.+-.+|.+.|++++|+..+++..+.. ..+...|..+-.
T Consensus 83 ~~~l~~A~~lf~~M~~~G---~~P-----------d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~ 148 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDK---VVP-----------NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALF 148 (501)
T ss_dssp CHHHHHHHHHHHHHHHTT---CCC-----------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhC---CCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHH
Confidence 344667777776654321 000 12347788889999999999999999987653 336788888899
Q ss_pred HHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHHH
Q 008400 491 AYIQMADLDLAEFDIKKALEI--DPDNRDVKLEYK 523 (567)
Q Consensus 491 a~~~l~~~~~A~~~~~~al~l--~P~n~~~~~~l~ 523 (567)
+|...|+.++|.+.|+...+. .|+......++.
T Consensus 149 ~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~ 183 (501)
T 4g26_A 149 GFCRKGDADKAYEVDAHMVESEVVPEEPELAALLK 183 (501)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 999999999999999998764 566544444443
No 328
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=78.70 E-value=5.9 Score=30.27 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=29.5
Q ss_pred HHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh
Q 008400 397 EAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (567)
Q Consensus 397 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (567)
..|..+..+|..+-+.|+|++|+.+|..|++++-
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 4567788888888999999999999999998764
No 329
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=77.81 E-value=5.1 Score=44.12 Aligned_cols=83 Identities=17% Similarity=0.093 Sum_probs=46.9
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc----
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL---- 477 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~---- 477 (567)
-..+-......|+++.|.+..+.. .. ...+.++|..+++.++++.|+.+|.++-..
T Consensus 655 ~~~~f~~~l~~~~~~~A~~~~~~~-------~~-------------~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~ 714 (814)
T 3mkq_A 655 QDQKFELALKVGQLTLARDLLTDE-------SA-------------EMKWRALGDASLQRFNFKLAIEAFTNAHDLESLF 714 (814)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTC-------CC-------------HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHH
T ss_pred cchheehhhhcCCHHHHHHHHHhh-------Cc-------------HhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhH
Confidence 344445556677777776664311 10 123667888888888888888888775221
Q ss_pred ----CCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 008400 478 ----DSRNVKALYRRAQAYIQMADLDLAEFD 504 (567)
Q Consensus 478 ----~p~~~ka~~~~a~a~~~l~~~~~A~~~ 504 (567)
...+.+.+-+++......|++..|...
T Consensus 715 ~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~ 745 (814)
T 3mkq_A 715 LLHSSFNNKEGLVTLAKDAETTGKFNLAFNA 745 (814)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCchHHHHHH
Confidence 234445555555444444444444433
No 330
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.64 E-value=4.4 Score=41.35 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=60.7
Q ss_pred HHhhHHHHHHhccCHHHHHHHHHHHhccCCC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--CCCHHHHHHHHH
Q 008400 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSR---NVKALYRRAQAYIQMADLDLAEFDIKKALEID--PDNRDVKLEYKT 524 (567)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~---~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~--P~n~~~~~~l~~ 524 (567)
++..+|..|++.|+++.|++.+.++...... -...++...++++..++|..|...++++..+- ..++..+..+..
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 4678999999999999999999999875432 36888999999999999999999999998762 334455554444
Q ss_pred H
Q 008400 525 L 525 (567)
Q Consensus 525 ~ 525 (567)
+
T Consensus 213 ~ 213 (429)
T 4b4t_R 213 Y 213 (429)
T ss_dssp H
T ss_pred H
Confidence 4
No 331
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=76.51 E-value=6.3 Score=43.35 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=42.5
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCC
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSR 480 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~ 480 (567)
.++..|..+.+.++++.|.++|.++-. +..+..+|...++.+......+.+.... .
T Consensus 683 ~W~~la~~al~~~~~~~A~~~y~~~~d-----------------------~~~l~~l~~~~~~~~~~~~~~~~a~~~~-~ 738 (814)
T 3mkq_A 683 KWRALGDASLQRFNFKLAIEAFTNAHD-----------------------LESLFLLHSSFNNKEGLVTLAKDAETTG-K 738 (814)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTC-----------------------HHHHHHHHHHTTCHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHccC-----------------------hhhhHHHHHHcCCHHHHHHHHHHHHHcC-c
Confidence 346777777778888888888876543 2234444444555555444444443321 1
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 008400 481 NVKALYRRAQAYIQMADLDLAEFDIKK 507 (567)
Q Consensus 481 ~~ka~~~~a~a~~~l~~~~~A~~~~~~ 507 (567)
. .....+|+.+|++++|++.|.+
T Consensus 739 ~----~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 739 F----NLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp H----HHHHHHHHHHTCHHHHHHHHHH
T ss_pred h----HHHHHHHHHcCCHHHHHHHHHH
Confidence 1 1112245556666666666544
No 332
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=76.08 E-value=18 Score=30.31 Aligned_cols=61 Identities=18% Similarity=0.093 Sum_probs=45.3
Q ss_pred HhhHHHHHHh-ccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 451 NLNNAACKLK-LKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 451 ~~nla~~~~k-~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
|.++|.-++- +|+-++--+.+...+.-++-++..++.+|.||.++|+..+|.+.+++|-+-
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 6677765554 445555445555555666778999999999999999999999999999874
No 333
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=75.95 E-value=7.2 Score=34.30 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=38.0
Q ss_pred HhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008400 459 LKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 459 ~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 509 (567)
++.|+++.|.+.++.. ++...|-++|.+.+..|+++-|+.+|.++-
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 4678889988888765 567888899999999999999999888764
No 334
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=75.75 E-value=28 Score=30.30 Aligned_cols=53 Identities=13% Similarity=0.076 Sum_probs=44.7
Q ss_pred hhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008400 452 LNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 452 ~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 509 (567)
+-++...+-.|+|..|+-.+. .-+.+.+.|..+.||..+.+|..|+.++++.+
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777778899999887653 33568999999999999999999999999999
No 335
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.63 E-value=5.5 Score=46.29 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=72.3
Q ss_pred hhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCCh--HHHHHHH------HHHHHHHhhHHHHHHhccCHHHHHHHHHHH
Q 008400 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGD--EEKKQAK------ALKVACNLNNAACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 403 ~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~--e~~~~~~------~~~~~~~~nla~~~~k~~~~~~Ai~~~~~a 474 (567)
.-.|..++..|++++|..+|.+|..-+........ ....... ......|+.....+-+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56788889999999999999988654322211111 1111110 112234666777888889999999999999
Q ss_pred hccCCCC-H----HHHHHHHHHHHhcCCHHHHHHHHHH
Q 008400 475 LDLDSRN-V----KALYRRAQAYIQMADLDLAEFDIKK 507 (567)
Q Consensus 475 l~~~p~~-~----ka~~~~a~a~~~l~~~~~A~~~~~~ 507 (567)
|+..+.+ . ..|.+.-++++.+++|++|-..+-.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 9875433 2 2577889999999999999776643
No 336
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.09 E-value=29 Score=35.36 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=70.0
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhcc----CCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHH---hCCCCHH
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLDL----DSRN--VKALYRRAQAYIQMADLDLAEFDIKKALE---IDPDNRD 517 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~----~p~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~---l~P~n~~ 517 (567)
+..+...+|..|...|+|.+|......+..- ++.. ...++...+.|+..++|..|...++++.. -.+.++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 4555677899999999999999999887531 2211 46788889999999999999999999743 3556666
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHhhHhhh
Q 008400 518 VKLEYKTLKEKMKEYNK---KEAKFYGNMFAKMK 548 (567)
Q Consensus 518 ~~~~l~~~~~~~~~~~~---~e~~~~~~~f~~~~ 548 (567)
.+..+..+..++...+. ...+.|..+|....
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~ 249 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDA 249 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccc
Confidence 66666665555443332 22334555554433
No 337
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.26 E-value=18 Score=29.10 Aligned_cols=75 Identities=11% Similarity=0.086 Sum_probs=57.1
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhcc-------CCCChHHHHHHHHHHHHHHhhHHHHHHhccCHH
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD-------TSFGDEEKKQAKALKVACNLNNAACKLKLKDYK 465 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~-------~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~ 465 (567)
....+.|-.+.++|-..=..|+-+.|+..|++++..+... .....+.++..+.+..+...|+..+.-+++...
T Consensus 16 k~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le 95 (116)
T 2dl1_A 16 REAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILE 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777888888778899999999999999876532 124457888899999998999999887777555
Q ss_pred HH
Q 008400 466 QA 467 (567)
Q Consensus 466 ~A 467 (567)
..
T Consensus 96 ~~ 97 (116)
T 2dl1_A 96 KG 97 (116)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 338
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=71.32 E-value=6.1 Score=30.30 Aligned_cols=28 Identities=21% Similarity=0.126 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008400 482 VKALYRRAQAYIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 482 ~ka~~~~a~a~~~l~~~~~A~~~~~~al 509 (567)
+-.+-|+|.+++..|.|++|+++.++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3455688888888888888877766655
No 339
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.95 E-value=5.6 Score=29.30 Aligned_cols=40 Identities=15% Similarity=0.213 Sum_probs=33.1
Q ss_pred hHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc
Q 008400 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (567)
Q Consensus 392 ~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (567)
.+++...-......|..+..+|++++|+.+|.+|+..++.
T Consensus 10 ~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 10 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 3455555667789999999999999999999999998764
No 340
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=69.78 E-value=6.6 Score=30.12 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=31.3
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (567)
+..|..+-.++..+.+.|+|++||.+..+|..++..
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 456778888999999999999999999999987653
No 341
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=69.70 E-value=9.3 Score=39.18 Aligned_cols=103 Identities=6% Similarity=-0.006 Sum_probs=68.8
Q ss_pred CcHHHHHHHHHHHHHhhhccCCCChHHH-HHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC--------CC--C
Q 008400 413 GKYARASKRYEKAVKYIEYDTSFGDEEK-KQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD--------SR--N 481 (567)
Q Consensus 413 g~~~~A~~~y~~al~~~~~~~~~~~e~~-~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~--------p~--~ 481 (567)
...+.|.+...++...+-.+.....++. -..+....-+.+++-.+|+++++...|....+..-... |. .
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 3467777778887777555443211000 01233334445677789999999888877775542221 21 2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-CCCC
Q 008400 482 VKALYRRAQAYIQMADLDLAEFDIKKALEI-DPDN 515 (567)
Q Consensus 482 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-~P~n 515 (567)
+..+|.+|+.++..++|.+|..+|..|++. .|.+
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 578899999999999999999999999998 7765
No 342
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=67.05 E-value=91 Score=30.28 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=57.6
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHH-HHHhhhccCCCChHHHHHHHHHHHHH------------HhhHHHHHH
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEK-AVKYIEYDTSFGDEEKKQAKALKVAC------------NLNNAACKL 459 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~-al~~~~~~~~~~~e~~~~~~~~~~~~------------~~nla~~~~ 459 (567)
++..+.-+.++...+.+.++++|++|+..... |+.++...... -...+-.+.+.+ ..++..+..
T Consensus 29 ~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~---sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~ 105 (336)
T 3lpz_A 29 EEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGG---SGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLR 105 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH---HHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcc---hHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 34466667788888899999999999986444 44443321100 000000000000 111222222
Q ss_pred hccC--------HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHH
Q 008400 460 KLKD--------YKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDI 505 (567)
Q Consensus 460 k~~~--------~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~ 505 (567)
.... .++|+....+.=...-.++..+...|..|...++|.+|...|
T Consensus 106 ~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 106 LFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 2211 223444443321222345777888888899888888888776
No 343
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=65.44 E-value=17 Score=36.96 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHhhhc
Q 008400 416 ARASKRYEKAVKYIEY 431 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~ 431 (567)
+.|+++|++|+.++..
T Consensus 449 ~kAi~~Y~~Ai~~L~k 464 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQK 464 (526)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5566666666666554
No 344
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=65.20 E-value=11 Score=29.36 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=35.1
Q ss_pred ChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc
Q 008400 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (567)
Q Consensus 391 ~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (567)
+.+++...-......|..++.+|+++.|+.+|.+|+..++.
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 45666677778889999999999999999999999998764
No 345
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=64.56 E-value=44 Score=25.31 Aligned_cols=18 Identities=6% Similarity=-0.095 Sum_probs=7.9
Q ss_pred HHhcCCHHHHHHHHHHHH
Q 008400 492 YIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 492 ~~~l~~~~~A~~~~~~al 509 (567)
+-..|+|++|+..|..|+
T Consensus 26 ~D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 26 LDSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHHTTCHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHH
Confidence 344444444444444443
No 346
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=63.27 E-value=15 Score=39.76 Aligned_cols=61 Identities=16% Similarity=0.165 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008400 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYKTLKEKMKEYNKKEAKFYGNMF 544 (567)
Q Consensus 482 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f 544 (567)
..+...+|+.++..|+|.-|...++.++..+|+|.+++.++..+.+.+..+. +...+++.|
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~--~~~~~r~~y 509 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA--ENAGWRNSY 509 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC--SSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc--cChHHHHHH
Confidence 3566777888888888888888888888888888888888777766665443 344555544
No 347
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.59 E-value=20 Score=26.32 Aligned_cols=37 Identities=5% Similarity=0.099 Sum_probs=29.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008400 487 RRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEYK 523 (567)
Q Consensus 487 ~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~ 523 (567)
.+|..+...|++++|...|-+|+.+.|+-.+....+.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5788888999999999999999999888765544443
No 348
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=59.54 E-value=39 Score=25.64 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.7
Q ss_pred HHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHh
Q 008400 396 IEAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (567)
Q Consensus 396 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~ 428 (567)
...+..+...|..+|+.++|.+|+..|+++...
T Consensus 50 e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 50 EKKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 367888999999999999999999999999865
No 349
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=59.00 E-value=55 Score=24.81 Aligned_cols=47 Identities=21% Similarity=0.331 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHH----HHHHHHHHH
Q 008400 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKL----EYKTLKEKM 529 (567)
Q Consensus 482 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~----~l~~~~~~~ 529 (567)
...+.-.|+-++..++|.+|...|+++..+. +|..+.. .+..|++++
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~~i~ki~~fyl~ec~kkl 103 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS-DNEEIKKIASFYLEECRKKL 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHHh
Confidence 4556667788899999999999999998765 4544433 345555443
No 350
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=58.26 E-value=67 Score=36.44 Aligned_cols=100 Identities=6% Similarity=-0.118 Sum_probs=72.8
Q ss_pred hhhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccC-C
Q 008400 401 KKKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLD-S 479 (567)
Q Consensus 401 ~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~-p 479 (567)
.+...=+.+.+.|+.++|.+.|....+........ .+..|+-+-..|.+.|++++|+..+++..+.. .
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-----------dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~ 197 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-----------TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLT 197 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-----------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-----------CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC
Confidence 35566678899999999999997755432111110 12347788889999999999999999986643 2
Q ss_pred CCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHh
Q 008400 480 RNVKALYRRAQAYIQMAD-LDLAEFDIKKALEI 511 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~-~~~A~~~~~~al~l 511 (567)
.|.-.|.-+-.++.+.|+ .++|...|+...+.
T Consensus 198 PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 198 PDLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp CCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 356777777778888887 47888888877764
No 351
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=57.70 E-value=48 Score=24.90 Aligned_cols=19 Identities=16% Similarity=-0.088 Sum_probs=8.6
Q ss_pred HHHHhccCHHHHHHHHHHH
Q 008400 456 ACKLKLKDYKQAEKLCTKV 474 (567)
Q Consensus 456 ~~~~k~~~~~~Ai~~~~~a 474 (567)
.-.-+.|+|.+|+.+|..+
T Consensus 27 ve~D~~g~y~eAl~lY~~a 45 (83)
T 2w2u_A 27 VKADKEGNAEEAITNYKKA 45 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHH
Confidence 3333445555555444333
No 352
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=57.46 E-value=54 Score=24.58 Aligned_cols=13 Identities=8% Similarity=0.230 Sum_probs=6.7
Q ss_pred HHHHHHHHhCCCC
Q 008400 503 FDIKKALEIDPDN 515 (567)
Q Consensus 503 ~~~~~al~l~P~n 515 (567)
+.|.++++..|+.
T Consensus 39 e~l~~~lk~e~d~ 51 (83)
T 2v6y_A 39 EVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCH
Confidence 3355555556554
No 353
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.80 E-value=17 Score=29.21 Aligned_cols=45 Identities=18% Similarity=0.126 Sum_probs=31.0
Q ss_pred cCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 008400 462 KDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPD 514 (567)
Q Consensus 462 ~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 514 (567)
..|.+|..+.+++|.+|.. +.-..++.-|.+++..|++++.+..+
T Consensus 17 ~~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 3467888888888888752 44445555566677777888887653
No 354
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=56.43 E-value=34 Score=29.14 Aligned_cols=72 Identities=13% Similarity=0.116 Sum_probs=54.7
Q ss_pred HhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHH
Q 008400 410 FKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRA 489 (567)
Q Consensus 410 ~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a 489 (567)
...++.++|...|+.++.. ...+ ..++...|.-..++|+...|.+.+.+|+.+.|.. +-++..|
T Consensus 71 ~ei~D~d~aR~vy~~a~~~---hKkF------------AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~-~~~le~a 134 (161)
T 4h7y_A 71 KAIQEPDDARDYFQMARAN---CKKF------------AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVP-LEMLEIA 134 (161)
T ss_dssp HHHHCGGGCHHHHHHHHHH---CTTB------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBC-HHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHH---hHHH------------HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCc-HHHHHHH
Confidence 3447889999999999985 2222 5668888889999999999999999999998764 5555555
Q ss_pred HHHHhcCC
Q 008400 490 QAYIQMAD 497 (567)
Q Consensus 490 ~a~~~l~~ 497 (567)
..-+..|.
T Consensus 135 ~~nl~~~~ 142 (161)
T 4h7y_A 135 LRNLNLQK 142 (161)
T ss_dssp HHHHHTTC
T ss_pred HHhhhcCC
Confidence 55555553
No 355
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=56.14 E-value=16 Score=39.05 Aligned_cols=56 Identities=9% Similarity=0.017 Sum_probs=46.6
Q ss_pred HHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 455 AACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 455 a~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
+...++.++|..|...+.+.-.......++.|.+|+++..+|+-++|...|+++..
T Consensus 292 ~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 292 VRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 33445779999999999876554445689999999999999999999999998875
No 356
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=54.37 E-value=1.5e+02 Score=28.35 Aligned_cols=27 Identities=7% Similarity=-0.213 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 008400 480 RNVKALYRRAQAYIQMADLDLAEFDIK 506 (567)
Q Consensus 480 ~~~ka~~~~a~a~~~l~~~~~A~~~~~ 506 (567)
.++..+...|..|...+++.+|...|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 467888889999999999999988774
No 357
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=52.89 E-value=75 Score=24.34 Aligned_cols=14 Identities=7% Similarity=-0.097 Sum_probs=7.3
Q ss_pred HHHHHHHHHhCCCC
Q 008400 502 EFDIKKALEIDPDN 515 (567)
Q Consensus 502 ~~~~~~al~l~P~n 515 (567)
++.|..+++..|+.
T Consensus 42 ie~l~~alk~e~~~ 55 (93)
T 1wfd_A 42 IDMLLQVLKGTKES 55 (93)
T ss_dssp HHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHCCCH
Confidence 33455555656554
No 358
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=51.90 E-value=28 Score=31.22 Aligned_cols=40 Identities=20% Similarity=0.179 Sum_probs=30.8
Q ss_pred HHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHH
Q 008400 445 ALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKA 484 (567)
Q Consensus 445 ~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka 484 (567)
...+..++.+|.+++-.++|.+|..++..|++..|.....
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~ 50 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQK 50 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHH
Confidence 3456667778888888888999988888888887765433
No 359
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=50.56 E-value=1.4e+02 Score=33.86 Aligned_cols=96 Identities=8% Similarity=-0.006 Sum_probs=66.8
Q ss_pred HHhhHHHHHHhccCHHHHHHHHHHHhcc----CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHHH
Q 008400 450 CNLNNAACKLKLKDYKQAEKLCTKVLDL----DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI--DPDNRDVKLEYK 523 (567)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~----~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--~P~n~~~~~~l~ 523 (567)
.|+-+-.+|.+.|+.++|...+.+.-+. -..++-.|.-+-..|.+.|++++|.+.|+...+. .|+-......+.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 3667778999999999999999765432 2446788999999999999999999999998764 576544444443
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHh
Q 008400 524 TLKEKMKEYNKKEAKFYGNMFAK 546 (567)
Q Consensus 524 ~~~~~~~~~~~~e~~~~~~~f~~ 546 (567)
+..+.+...++..+.+..|..+
T Consensus 209 -glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 209 -CMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp -HHHHHTCCHHHHHHHHHHHHHH
T ss_pred -HHHhCCCcHHHHHHHHHHHHHc
Confidence 3233222122233567777654
No 360
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=46.80 E-value=1.1e+02 Score=31.55 Aligned_cols=48 Identities=6% Similarity=-0.042 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhccCCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 464 YKQAEKLCTKVLDLDSR-----------NVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~-----------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
|+..+.+++.|+..-|. ..-|+-.+|++|+..++|++|+..+++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56677777777664442 1357888999999999999999999999863
No 361
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=46.43 E-value=91 Score=26.71 Aligned_cols=59 Identities=10% Similarity=0.069 Sum_probs=45.2
Q ss_pred hHHHHHHhccCHHHHHHHHHHHhccCCCC------HHHHHH-HHHH--HHhcCCHHHHHHHHHHHHHh
Q 008400 453 NNAACKLKLKDYKQAEKLCTKVLDLDSRN------VKALYR-RAQA--YIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 453 nla~~~~k~~~~~~Ai~~~~~al~~~p~~------~ka~~~-~a~a--~~~l~~~~~A~~~~~~al~l 511 (567)
..+..++..++|-+|-+.++.+....+.. .+++.+ +|.+ +...|+...|...+.+|+..
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 35556667799999999999998876554 456666 5555 45569999999999999873
No 362
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=46.05 E-value=89 Score=23.16 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=16.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 486 YRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 486 ~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
..+|+=|..+|+|+.|+.+|+.+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 4556666667777777777766664
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.45 E-value=63 Score=36.51 Aligned_cols=27 Identities=7% Similarity=0.101 Sum_probs=22.2
Q ss_pred hhhhhHHHhcCcHHHHHHHHHHHHHhh
Q 008400 403 KEQGNTLFKAGKYARASKRYEKAVKYI 429 (567)
Q Consensus 403 ~~~G~~~~~~g~~~~A~~~y~~al~~~ 429 (567)
.-+|..++..|++++|..+|++|-.-+
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl 870 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVL 870 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhc
Confidence 457888999999999999999876443
No 364
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=43.98 E-value=89 Score=26.79 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=47.0
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHH-hhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACN-LNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~-~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
-...|..+|..|+|-+|-+.++.+=...+. .+ ++.. -++..+. +..|..+++.|++..|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~---~~-~er~---~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGR---GN-TESK---FLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCS---SS-HHHH---HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCC---Cc-hHHH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 467888999999999999888876543221 11 1222 2233334 4566677778999999999999976
No 365
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=43.61 E-value=59 Score=30.31 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhc
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (567)
+.|...|+.|..+. ..-..+ ++++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pt-------hPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPT-------HPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTT-------CHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCC-------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56888999999886 322211 36777888899988887 7899999998888764
No 366
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=43.55 E-value=32 Score=35.00 Aligned_cols=95 Identities=15% Similarity=0.101 Sum_probs=54.0
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCC--C---h--HHHHH-HHHHHHHHHhhHHHHHHhccCHHHHHHHHHH
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSF--G---D--EEKKQ-AKALKVACNLNNAACKLKLKDYKQAEKLCTK 473 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~--~---~--e~~~~-~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~ 473 (567)
+...++.+.+.++|.+|.-.+.....++.-+... . . ....+ ..+.+..+|...+..+-+-+.|+.|+..|+.
T Consensus 38 l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~ 117 (436)
T 2yin_A 38 LYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKE 117 (436)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3456788889999999998885554444322111 0 0 00001 1123334555566666677889999999998
Q ss_pred HhccCCCCHHHHHHHHHHHHhcC
Q 008400 474 VLDLDSRNVKALYRRAQAYIQMA 496 (567)
Q Consensus 474 al~~~p~~~ka~~~~a~a~~~l~ 496 (567)
++..-..+..-|-.++.+|..+.
T Consensus 118 L~~~yE~~~~Dy~~Ls~~~~~~a 140 (436)
T 2yin_A 118 LAEQYEMEIFDYELLSQNLIQQA 140 (436)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 87643333233444555555443
No 367
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=43.04 E-value=53 Score=30.15 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhc
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (567)
+.|...|+.|..+....-.. .++++..+.+|.+..|+. +++.++|+..+++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~p-------thPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPP-------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56888899999875432111 136777788899888877 7899999998888754
No 368
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=42.76 E-value=1.3e+02 Score=24.15 Aligned_cols=20 Identities=10% Similarity=0.056 Sum_probs=10.7
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q 008400 501 AEFDIKKALEIDPDNRDVKL 520 (567)
Q Consensus 501 A~~~~~~al~l~P~n~~~~~ 520 (567)
|++.|..+++..+.+...+.
T Consensus 44 Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHH
Confidence 33445566666766654333
No 369
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=42.69 E-value=1.1e+02 Score=23.28 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=46.3
Q ss_pred HHHHHhhhhhhhhHHHhc---CcHHHHHHHHHHHHHhhhcc----CCCChHHHHHHHHHHHHHHhhHHHHHHhc
Q 008400 395 KIEAAGKKKEQGNTLFKA---GKYARASKRYEKAVKYIEYD----TSFGDEEKKQAKALKVACNLNNAACKLKL 461 (567)
Q Consensus 395 ~~~~a~~~~~~G~~~~~~---g~~~~A~~~y~~al~~~~~~----~~~~~e~~~~~~~~~~~~~~nla~~~~k~ 461 (567)
-.+.|-.+.++|-..=.. |+-.+|+..|++.+..+... .....+.++..+.+..+...|+..+--++
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~RL 85 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDRL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677777776666 88888899998888876532 11244677788888877777777765444
No 370
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=40.24 E-value=62 Score=30.14 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhc
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (567)
+.|...|+.|..+....-.. .++++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~p-------ThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPP-------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56788899988764322111 136777788888888777 6889999888887754
No 371
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=39.96 E-value=63 Score=29.87 Aligned_cols=54 Identities=17% Similarity=0.195 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhc
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (567)
+.|...|+.|..+....-.. .++++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQP-------THPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56888899998865422111 136777788899888777 6889999888887754
No 372
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=39.92 E-value=35 Score=26.41 Aligned_cols=36 Identities=6% Similarity=0.087 Sum_probs=27.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008400 487 RRAQAYIQMADLDLAEFDIKKALEIDPDNRDVKLEY 522 (567)
Q Consensus 487 ~~a~a~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l 522 (567)
.+|..++..|+++.|+..|-+|+.+.|+-.+....+
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~ 60 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 60 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 578888888889999988888888888765444444
No 373
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=39.51 E-value=38 Score=38.34 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=39.5
Q ss_pred HHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 455 AACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 455 a~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
+..+++.+.++-|. ..+..-|.++-.-|-+|++|+.+|++++|..+|++|-.
T Consensus 817 ~~~L~~~~~~~~a~----eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 817 VEKLFLFKQYNACM----QLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHHTTCHHHHH----HHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHhcHHHHHH----HHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 33444556665433 35567788888889999999999999999999998763
No 374
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=38.96 E-value=1.2e+02 Score=22.60 Aligned_cols=19 Identities=11% Similarity=-0.010 Sum_probs=9.5
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q 008400 492 YIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 492 ~~~l~~~~~A~~~~~~al~ 510 (567)
.-..|+|++|+..|..|++
T Consensus 23 ~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 23 LDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 3444555555555554443
No 375
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=38.92 E-value=66 Score=30.02 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHh
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVL 475 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al 475 (567)
+.|...|+.|..+....-.. .++++.-+.+|.+..|+. +++.++|+..+++|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAP-------THPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCC-------CCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 56888899999875432111 136777888899988877 689999999888875
No 376
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=36.28 E-value=2e+02 Score=24.56 Aligned_cols=49 Identities=6% Similarity=0.073 Sum_probs=36.7
Q ss_pred HHHHHHHHhcc--CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 467 AEKLCTKVLDL--DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 467 Ai~~~~~al~~--~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
+...|...... --..+..|-..|..+...|++.+|.+.|+.+++....-
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P 129 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEP 129 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 55556555443 34456667778999999999999999999999876443
No 377
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=35.44 E-value=7.9 Score=36.16 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhcc
Q 008400 393 EEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEYD 432 (567)
Q Consensus 393 ~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~ 432 (567)
......|..+..+|..+=+.|+|++|+.+|..|++++-..
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp ----------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3455678888899999999999999999999999987543
No 378
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=35.10 E-value=77 Score=28.26 Aligned_cols=34 Identities=21% Similarity=0.073 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 482 VKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 482 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
+..+|.+|+.++..++|.+|..+|..|++..|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 3556667777777777777777777777776654
No 379
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=34.87 E-value=80 Score=28.75 Aligned_cols=59 Identities=12% Similarity=-0.000 Sum_probs=41.9
Q ss_pred hcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhc
Q 008400 411 KAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (567)
Q Consensus 411 ~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (567)
..|+-+.|...|+.|..+....-. ..++++.-+.+|.+..|+. +++.++|+...++|+.
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~L~-------pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEHPD-------KIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHCGG-------GGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhCC-------CCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 456678899999999987542111 1124456667888887775 6889999999998866
No 380
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=33.75 E-value=1.5e+02 Score=30.23 Aligned_cols=48 Identities=8% Similarity=-0.139 Sum_probs=36.9
Q ss_pred HH-HHHHHHHHHhcc-CCC--------CHHHHHHHHHHHHhcC---------CHHHHHHHHHHHHHh
Q 008400 464 YK-QAEKLCTKVLDL-DSR--------NVKALYRRAQAYIQMA---------DLDLAEFDIKKALEI 511 (567)
Q Consensus 464 ~~-~Ai~~~~~al~~-~p~--------~~ka~~~~a~a~~~l~---------~~~~A~~~~~~al~l 511 (567)
|+ ..+.+++.|+.. -|. ..-|+-.+|++|+..+ +|++|++.+++++..
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 56 677788888776 331 2467888899999888 899999999998863
No 381
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=33.66 E-value=88 Score=28.69 Aligned_cols=55 Identities=15% Similarity=0.224 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhc
Q 008400 415 YARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLD 476 (567)
Q Consensus 415 ~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~ 476 (567)
-+.|...|+.|..+....-.. .++++.-+.+|.+..|+. +++.++|+..+++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~p-------thPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPP-------TNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCT-------TCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCC-------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 367888999998875422111 136777788899888775 6899999988888754
No 382
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=32.69 E-value=3.3e+02 Score=25.94 Aligned_cols=86 Identities=15% Similarity=0.111 Sum_probs=50.0
Q ss_pred hhhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhcc----
Q 008400 402 KKEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDL---- 477 (567)
Q Consensus 402 ~~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~---- 477 (567)
..++=...+..|+|-+|.+.|+......-....+ ...+.+++.-|..+++.+++..|.+.+...++.
T Consensus 16 ~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~~~---------~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~ 86 (312)
T 2wpv_A 16 TLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSY---------EHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLA 86 (312)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhccChHHHHHHHHHHHHHHHHhcCH---------HHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHc
Confidence 3344455666778888877777655443222211 233445667777788888888888776555442
Q ss_pred -CCCCHHHHHHHHHHHHhcC
Q 008400 478 -DSRNVKALYRRAQAYIQMA 496 (567)
Q Consensus 478 -~p~~~ka~~~~a~a~~~l~ 496 (567)
.+-+....-|+..++....
T Consensus 87 ~~~~~~~~~~rl~~l~~~~p 106 (312)
T 2wpv_A 87 EVKVDDISVARLVRLIAELD 106 (312)
T ss_dssp TCCCSHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHHCC
Confidence 2334455556666555543
No 383
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=32.40 E-value=1.3e+02 Score=31.31 Aligned_cols=48 Identities=15% Similarity=0.020 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhccCCC-------------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 464 YKQAEKLCTKVLDLDSR-------------NVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~-------------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
|+..+.+++.|+..-|. ..-|+-.+|++|+..++|++|.+.+++++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 55667777777665451 1357888999999999999999999999863
No 384
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=32.16 E-value=2.9e+02 Score=27.06 Aligned_cols=51 Identities=10% Similarity=0.073 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHH
Q 008400 478 DSRNVKALYRRAQAYIQMADLDLAEFDIKKALEI------DPDNRDVKLEYKTLKEK 528 (567)
Q Consensus 478 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l------~P~n~~~~~~l~~~~~~ 528 (567)
...++-.|..+|-.|++.+++.+|+..+-.|-.. .-++.++.+++-.+...
T Consensus 292 ~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAne 348 (472)
T 3re2_A 292 SDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIAND 348 (472)
T ss_dssp TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHT
T ss_pred ccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 4566788888999999999999999888777654 23345666666555433
No 385
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=32.12 E-value=53 Score=35.33 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=44.1
Q ss_pred HHhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCH
Q 008400 450 CNLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADL 498 (567)
Q Consensus 450 ~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~ 498 (567)
.....|...+..|+|.-|.+.++.++..+|+|..|...+|.+|.++|.-
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 3556788888999999999999999999999999999999999999843
No 386
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=32.07 E-value=79 Score=32.13 Aligned_cols=47 Identities=17% Similarity=0.029 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHhccCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 464 YKQAEKLCTKVLDLDSR--------NVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~--------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
|+..+.+++.|+..-|. ..-|+..+|++|+.+++|++|+...++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 56778888888765443 246788899999999999999999998885
No 387
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.87 E-value=40 Score=38.97 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=38.3
Q ss_pred HHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008400 454 NAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 454 la~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 509 (567)
+..+.++.+.++.|.. .+...|.++-.-|-+|++|+..|++++|..+|++|-
T Consensus 818 l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 3344455555554433 334567777788999999999999999999998874
No 388
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=29.91 E-value=98 Score=31.64 Aligned_cols=49 Identities=14% Similarity=0.092 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhccCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 008400 464 YKQAEKLCTKVLDLDSR--------NVKALYRRAQAYIQMADLDLAEFDIKKALEID 512 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~--------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 512 (567)
|+..+.+++.|+..-|. ..-|+-.+|++|+..++|++|+...++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 67788889888876543 24578889999999999999999999998753
No 389
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=29.30 E-value=83 Score=29.41 Aligned_cols=57 Identities=21% Similarity=0.166 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHh-ccCHHHHHHHHHHHhcc
Q 008400 416 ARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLK-LKDYKQAEKLCTKVLDL 477 (567)
Q Consensus 416 ~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k-~~~~~~Ai~~~~~al~~ 477 (567)
+.|...|+.|.++....-.. .-.++++.-+.+|.+..|+. +++.++|+..+++|+.-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~-----~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEK-----YPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTT-----GGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCC-----CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 56788899888765321100 11236777788888888775 68899999888887653
No 390
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=28.97 E-value=89 Score=31.82 Aligned_cols=47 Identities=15% Similarity=0.103 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhccCCC--------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 008400 464 YKQAEKLCTKVLDLDSR--------NVKALYRRAQAYIQMADLDLAEFDIKKALE 510 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~--------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 510 (567)
|+..+.+++.|+.+-|. ..-|+..+|++|+.+++|++|+...++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 56778888888765443 246788899999999999999999999886
No 391
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=28.72 E-value=37 Score=25.27 Aligned_cols=26 Identities=31% Similarity=0.253 Sum_probs=22.7
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
...+|.=|..+|+|+.|+.+|+.+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 55788888899999999999988876
No 392
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=34.77 E-value=12 Score=40.50 Aligned_cols=52 Identities=21% Similarity=0.152 Sum_probs=40.2
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRNVKALYRRAQAYIQMADLDLAE 502 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~ 502 (567)
.+..|...+..|+|.-|.+.++.++..+|+|..|...+|.+|.++|.-.+..
T Consensus 464 ~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~~ 515 (668)
T 2yhe_A 464 VLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTENA 515 (668)
Confidence 4566777777888888888888888888888888888888888887655443
No 393
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=27.52 E-value=69 Score=35.49 Aligned_cols=65 Identities=17% Similarity=0.203 Sum_probs=47.1
Q ss_pred CCCCCCEEEEEEEEEecCCcEEEec----------------c----------CCCCcccEEEEcCccchhhHHHHHHhcc
Q 008400 285 RPNEGAVVKVKLIGKLQDGTVFVKK----------------G----------HSEEEQLFEFKTDEEQVIDGLDRAVITM 338 (567)
Q Consensus 285 ~p~~~~~v~v~y~~~l~~g~~~~~~----------------~----------~~~~~~~~~~~lg~~~vi~gle~~l~~M 338 (567)
....|+.|.|.|+..|...-...+. . .-+.+..++|.+|.+.+.+-++.++..|
T Consensus 560 ~i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qm 639 (950)
T 3htx_A 560 SITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQM 639 (950)
T ss_dssp CCCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTC
T ss_pred ccCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeec
Confidence 4578999999999877421111000 0 0023566899999999999999999999
Q ss_pred CCCcEEEEEEc
Q 008400 339 KKNEVALLTIA 349 (567)
Q Consensus 339 ~~GE~~~v~i~ 349 (567)
..|+...|...
T Consensus 640 s~gqT~~F~~~ 650 (950)
T 3htx_A 640 TVGEYASFKMT 650 (950)
T ss_dssp CTTCEEEEEES
T ss_pred cccceeEEecc
Confidence 99999998854
No 394
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.44 E-value=1e+02 Score=31.99 Aligned_cols=69 Identities=13% Similarity=0.073 Sum_probs=49.6
Q ss_pred hhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhccCCCC
Q 008400 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLDLDSRN 481 (567)
Q Consensus 403 ~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~ 481 (567)
.-.=..|...+.|.+|...-+++. .|... .+ .......++.+|.++.-+++|.+|.+++..|++..|.+
T Consensus 235 nllLRnYL~~~~y~qA~~lvsk~~--fP~~~-~s-------n~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 235 NLILRDFLNNGEVDSASDFISKLE--YPHTD-VS-------SSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHSSCSTTHHHHHHHHC--SCTTT-SC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHccCcHHHHHHHHhcCc--CCccc-CC-------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 334445667788888888888774 22211 11 12345557789999999999999999999999988754
No 395
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=27.39 E-value=3.6e+02 Score=27.49 Aligned_cols=88 Identities=14% Similarity=0.023 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhcc------------------------CHHHHHHHHH
Q 008400 417 RASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLK------------------------DYKQAEKLCT 472 (567)
Q Consensus 417 ~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~------------------------~~~~Ai~~~~ 472 (567)
.+|...+.+|+.++.. ..++ . +.+...+++-+|.+|+.+= -|+..+++++
T Consensus 104 ~~I~~aN~~i~~i~~~--~~~~---~-~~~~gEA~flRA~~Yf~Lv~~fG~VPl~~~~~~~~~~R~s~~evy~~I~~DL~ 177 (527)
T 3ckc_A 104 YDITQYNFFLDQTEGM--TDAE---T-LRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELN 177 (527)
T ss_dssp HHHHHHHHHHHHSTTC--CSHH---H-HHHHHHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhc--cChH---H-HHHHHHHHHHHHHHHHHHHHHhCCCCccCCccccCCCcCCHHHHHHHHHHHHH
Confidence 4566666666655433 2221 1 4445555555555555421 1677888888
Q ss_pred HHhccCCC----------CHHHHHHHHHHHHhc------CCHHHHHHHHHHHHH
Q 008400 473 KVLDLDSR----------NVKALYRRAQAYIQM------ADLDLAEFDIKKALE 510 (567)
Q Consensus 473 ~al~~~p~----------~~ka~~~~a~a~~~l------~~~~~A~~~~~~al~ 510 (567)
.|+..-|. ..-|+-.+|++|+.. ++|++|++.+++++.
T Consensus 178 ~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 178 EIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 88775442 145777888888875 899999999999985
No 396
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=26.75 E-value=2.9e+02 Score=23.29 Aligned_cols=49 Identities=6% Similarity=0.055 Sum_probs=36.8
Q ss_pred HHHHHHHHhccC--CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 008400 467 AEKLCTKVLDLD--SRNVKALYRRAQAYIQMADLDLAEFDIKKALEIDPDN 515 (567)
Q Consensus 467 Ai~~~~~al~~~--p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~n 515 (567)
+...+....... -..+..|-..|..+...|++.+|.+.|+.+++-...-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P 134 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEP 134 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBS
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc
Confidence 566666655533 3445666678899999999999999999999875444
No 397
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=26.71 E-value=1.1e+02 Score=31.55 Aligned_cols=48 Identities=21% Similarity=0.104 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHhccCCC-----------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 008400 464 YKQAEKLCTKVLDLDSR-----------NVKALYRRAQAYIQMADLDLAEFDIKKALEI 511 (567)
Q Consensus 464 ~~~Ai~~~~~al~~~p~-----------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 511 (567)
|+..+.+++.|+..-|. ..-|+-.+|++|+.+++|++|+...++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 56677777777664432 2457888999999999999999999999875
No 398
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=26.05 E-value=2e+02 Score=21.99 Aligned_cols=63 Identities=21% Similarity=0.134 Sum_probs=38.4
Q ss_pred hhhhhHHHhcCcHHHHHHHHHHHHHhhhccCCCChHHHHHHHHHHHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 403 KEQGNTLFKAGKYARASKRYEKAVKYIEYDTSFGDEEKKQAKALKVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 403 ~~~G~~~~~~g~~~~A~~~y~~al~~~~~~~~~~~e~~~~~~~~~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
...|..+|..|+|-+|-+.++.+=...+ .++.. -++..+...-|..+++.|++ |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~------~~~~~---~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKAT------GEERR---LLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC------HHHHH---HHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCC------CchHH---HHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4578889999999999888887654321 11112 12222233444455556666 7777777755
No 399
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=25.27 E-value=86 Score=23.73 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=31.2
Q ss_pred hHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHh
Q 008400 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKY 428 (567)
Q Consensus 392 ~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~ 428 (567)
.++.++.|..+.+.|..++++|++..|+..+.=|--+
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~Gw 64 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAW 64 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4677889999999999999999999999887655443
No 400
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=24.88 E-value=90 Score=23.66 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=29.5
Q ss_pred hHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHH
Q 008400 392 TEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAV 426 (567)
Q Consensus 392 ~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al 426 (567)
.++.++.|..+.+.|..++++|++..|+..+.=|-
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~ 66 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAH 66 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45678899999999999999999999998876443
No 401
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=22.43 E-value=1.2e+02 Score=20.64 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=33.1
Q ss_pred ChHHHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhh
Q 008400 391 NTEEKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIE 430 (567)
Q Consensus 391 ~~~e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~ 430 (567)
+..+.+..|+++-..+...+.=.+..-|++..++||+++.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3456778888888888888888999999999999998764
No 402
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=22.34 E-value=2e+02 Score=19.82 Aligned_cols=51 Identities=12% Similarity=-0.040 Sum_probs=27.9
Q ss_pred HhhHHHHHHhccCHHHHHHHHHHHhccCCCC-HHHHHHHHHHHHhcCCHHHHH
Q 008400 451 NLNNAACKLKLKDYKQAEKLCTKVLDLDSRN-VKALYRRAQAYIQMADLDLAE 502 (567)
Q Consensus 451 ~~nla~~~~k~~~~~~Ai~~~~~al~~~p~~-~ka~~~~a~a~~~l~~~~~A~ 502 (567)
+..+|..-.-...+++|....+= |...+.. .-+-.-|...++..|+|++|+
T Consensus 9 LAe~AL~~TG~HcH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 9 LAELALAGTGHHCHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHccchHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 34556666667778887665443 4545543 445566778899999999986
No 403
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=22.32 E-value=1.1e+02 Score=31.14 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=25.3
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
+..++.-+|.+|+-+++|++|+..|++++.
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 344567788899999999999999999985
No 404
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=22.13 E-value=19 Score=36.80 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=0.0
Q ss_pred HHHHHHhhhhhhhhHHHhcCcHHHHHHHHHHHHHhhhc
Q 008400 394 EKIEAAGKKKEQGNTLFKAGKYARASKRYEKAVKYIEY 431 (567)
Q Consensus 394 e~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~al~~~~~ 431 (567)
+.++.|..+..+|..+-+.|+|++|+.+|..|++++..
T Consensus 6 ~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 6 TNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 34567888888999999999999999999999998654
No 405
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.79 E-value=5.7e+02 Score=25.02 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=54.7
Q ss_pred HHHHhccCHHHHHHHHHHHhccC-------C--------CC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh----CCC
Q 008400 456 ACKLKLKDYKQAEKLCTKVLDLD-------S--------RN--VKALYRRAQAYIQMADLDLAEFDIKKALEI----DPD 514 (567)
Q Consensus 456 ~~~~k~~~~~~Ai~~~~~al~~~-------p--------~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~l----~P~ 514 (567)
.+.....+.++|++..+.+...- . .. .......+..|+..++.++|...++++-.. +.-
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 34445678888888887663321 0 01 234446677888889999999888888753 112
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Q 008400 515 NRDVKLEYKTLKEKMKEYNKKEAKFYGNMFAKMK 548 (567)
Q Consensus 515 n~~~~~~l~~~~~~~~~~~~~e~~~~~~~f~~~~ 548 (567)
+..++..+-.+.....+........|...+..+.
T Consensus 164 ~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 164 PLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 2334555554444444444444556666655554
No 406
>3iv0_A SUSD homolog; NP_809186.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.87 E-value=3.5e+02 Score=27.39 Aligned_cols=46 Identities=4% Similarity=-0.194 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhcc------CCC-------------CHHHHHHHHHHHHhcCC---------HHHHHHHHHHHH
Q 008400 464 YKQAEKLCTKVLDL------DSR-------------NVKALYRRAQAYIQMAD---------LDLAEFDIKKAL 509 (567)
Q Consensus 464 ~~~Ai~~~~~al~~------~p~-------------~~ka~~~~a~a~~~l~~---------~~~A~~~~~~al 509 (567)
|+..+.+++.|+.. -|. ..-|+-.+|++|+..+. |++|++..+.++
T Consensus 166 y~~I~~DL~~A~~~~~~~~~Lp~~~~~~~~~~gR~tk~aA~allarvyL~~~~~~~~~~~~~~~~a~~~a~~vi 239 (481)
T 3iv0_A 166 LQNCLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASRGSVIALMMHINLWLVQFDAQNKEQYYRNVVSLGEELE 239 (481)
T ss_dssp HHHHHHHHHHHHHTCTTSCSSCSCCSSTTTTTTSCCHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcccccccCCCccccCcccCCccCHHHHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHH
Confidence 67788888888876 332 12456677888776653 777887777776
No 407
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=20.48 E-value=1.2e+02 Score=30.88 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=25.0
Q ss_pred HHHHHhhHHHHHHhccCHHHHHHHHHHHhc
Q 008400 447 KVACNLNNAACKLKLKDYKQAEKLCTKVLD 476 (567)
Q Consensus 447 ~~~~~~nla~~~~k~~~~~~Ai~~~~~al~ 476 (567)
+..++.-+|.+|+-+++|++|+..|++++.
T Consensus 195 k~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 195 RWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 345566788889999999999999999875
No 408
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=20.39 E-value=5.7e+02 Score=29.83 Aligned_cols=86 Identities=15% Similarity=0.118 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhcc----C----HHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 008400 439 EKKQAKALKVACNLNNAACKLKLK----D----YKQAEKLCTKVLD-LDSRNVKALYRRAQAYIQMADLDLAEFDIKKAL 509 (567)
Q Consensus 439 ~~~~~~~~~~~~~~nla~~~~k~~----~----~~~Ai~~~~~al~-~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 509 (567)
+.++.+..++.+++..+.+..++. . ...-.+.|.++++ .|+++.|++.-...-...+++|-.|++.+.+++
T Consensus 1232 ~m~~~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~ 1311 (1354)
T 3lxu_X 1232 NMDKQKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKLI 1311 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666666554444432 2 2233334444444 356677777655555557999999999999999
Q ss_pred HhCCCCHHHHHHHHHH
Q 008400 510 EIDPDNRDVKLEYKTL 525 (567)
Q Consensus 510 ~l~P~n~~~~~~l~~~ 525 (567)
+-.| .++....+..+
T Consensus 1312 ~~k~-~~~~~~~~~~~ 1326 (1354)
T 3lxu_X 1312 EEKR-TRDHFVELAAI 1326 (1354)
T ss_dssp HHTC-CHHHHHHHHHH
T ss_pred hccc-cHHHHHHHHHH
Confidence 8776 44444444433
Done!