Query 008406
Match_columns 567
No_of_seqs 520 out of 2360
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 02:48:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.7 9.1E-18 3.1E-22 173.0 9.0 156 120-311 148-311 (324)
2 3fcs_B Integrin beta-3; beta p 99.6 9E-16 3.1E-20 171.7 11.2 163 97-312 451-632 (690)
3 3fcs_B Integrin beta-3; beta p 99.6 6.8E-15 2.3E-19 164.6 11.9 138 126-311 447-604 (690)
4 2vj2_A Jagged-1; signalling, p 99.6 2.7E-15 9.1E-20 140.3 6.6 144 98-308 14-169 (169)
5 3k6s_B Integrin beta-2; cell r 99.5 2.5E-15 8.4E-20 167.7 6.2 137 124-308 434-592 (687)
6 3k6s_B Integrin beta-2; cell r 99.5 1.3E-14 4.4E-19 161.9 8.8 156 102-308 447-623 (687)
7 2gy5_A Angiopoietin-1 receptor 99.5 6.3E-14 2.2E-18 149.3 8.3 165 100-310 184-352 (423)
8 2gy5_A Angiopoietin-1 receptor 99.3 1E-12 3.4E-17 140.0 7.5 164 98-310 136-322 (423)
9 2ygq_A WIF-1, WNT inhibitory f 99.3 1.1E-12 3.9E-17 134.9 7.6 150 87-275 153-309 (324)
10 2p28_B Integrin beta-2; hybrid 99.3 1.2E-12 4.3E-17 126.5 5.8 62 234-310 143-216 (217)
11 2vj3_A Neurogenic locus notch 99.3 6.5E-12 2.2E-16 112.8 7.7 107 121-310 6-121 (135)
12 4d90_A EGF-like repeat and dis 99.2 2.6E-11 8.8E-16 109.7 8.9 125 122-310 2-135 (143)
13 1z1y_A Ookinete surface protei 99.2 3.1E-12 1.1E-16 121.2 1.5 141 124-311 10-178 (186)
14 2vj2_A Jagged-1; signalling, p 99.1 8.5E-11 2.9E-15 109.6 4.9 116 102-274 51-169 (169)
15 1klo_A Laminin; glycoprotein; 98.9 4.2E-10 1.4E-14 104.2 4.3 114 126-273 2-145 (162)
16 4fbr_A Lectin, myxobacterial h 98.9 5.9E-12 2E-16 124.3 -10.6 166 97-304 49-265 (267)
17 4aqs_A Laminin subunit beta-1; 98.8 7E-09 2.4E-13 113.7 9.8 102 184-308 405-525 (525)
18 2vj3_A Neurogenic locus notch 98.8 1.3E-08 4.3E-13 91.1 8.5 87 98-200 25-118 (135)
19 1z1y_A Ookinete surface protei 98.8 6.8E-10 2.3E-14 105.0 -0.1 132 97-275 21-176 (186)
20 4d90_A EGF-like repeat and dis 98.7 1.8E-08 6.1E-13 90.8 7.7 89 99-201 21-133 (143)
21 4fbr_A Lectin, myxobacterial h 98.6 4.3E-11 1.5E-15 118.2 -13.2 137 121-311 34-205 (267)
22 2bou_A EGF-like module contain 98.6 4E-08 1.4E-12 88.7 5.4 29 121-150 3-31 (143)
23 2p28_B Integrin beta-2; hybrid 98.4 8E-08 2.7E-12 92.8 3.3 64 124-200 142-213 (217)
24 2wg3_C Hedgehog-interacting pr 98.4 5.5E-08 1.9E-12 104.8 0.9 75 219-310 381-457 (463)
25 1yo8_A Thrombospondin-2; EGF, 98.4 3.8E-07 1.3E-11 100.8 7.1 117 121-274 4-146 (634)
26 1klo_A Laminin; glycoprotein; 98.3 4.6E-07 1.6E-11 83.6 4.0 98 98-200 28-145 (162)
27 1tpg_A T-plasminogen activator 98.2 5.7E-07 1.9E-11 74.7 3.9 50 257-310 31-88 (91)
28 1tpg_A T-plasminogen activator 98.1 1E-06 3.5E-11 73.1 3.5 85 139-277 3-89 (91)
29 4aqs_A Laminin subunit beta-1; 98.1 7.8E-07 2.7E-11 97.4 3.5 101 139-274 419-525 (525)
30 3zyj_B Netrin-G1; cell adhesio 98.1 1.8E-06 6.3E-11 90.6 5.2 47 233-299 370-418 (426)
31 1aut_L Activated protein C; se 98.1 3.8E-06 1.3E-10 72.6 5.7 67 121-198 16-87 (114)
32 1uzk_A Fibrillin-1; glycoprote 98.0 7.7E-07 2.6E-11 81.9 0.2 127 121-306 4-157 (162)
33 1yo8_A Thrombospondin-2; EGF, 98.0 1.9E-05 6.6E-10 87.3 10.5 88 99-200 23-145 (634)
34 2w86_A Fibrillin-1, fibrillin1 98.0 7.9E-07 2.7E-11 80.5 -0.7 46 257-306 87-142 (147)
35 1x7a_L Coagulation factor IX, 97.8 1.3E-05 4.3E-10 72.5 4.5 62 121-195 49-116 (146)
36 3u7u_G Neuregulin 1; signaling 97.8 1.3E-05 4.3E-10 59.8 3.5 41 112-154 2-50 (55)
37 1dx5_I Thrombomodulin; serine 97.8 4.7E-06 1.6E-10 72.5 1.0 99 121-271 5-112 (118)
38 2wg3_C Hedgehog-interacting pr 97.8 4.9E-06 1.7E-10 89.5 1.1 75 103-201 379-455 (463)
39 3u7u_G Neuregulin 1; signaling 97.7 1.6E-05 5.4E-10 59.2 2.8 43 269-311 1-52 (55)
40 1nfu_B Coagulation factor XA, 97.6 7.5E-06 2.6E-10 77.5 0.3 65 120-195 42-111 (195)
41 2e26_A Reelin, reeler protein; 97.6 1.1E-05 3.7E-10 89.3 1.3 50 260-312 520-569 (725)
42 2c4f_L Coagulation factor VII 97.6 3.9E-05 1.3E-09 68.9 4.5 71 120-199 47-127 (142)
43 2vh0_B Activated factor XA lig 97.6 1.2E-05 4E-10 71.6 0.3 64 121-195 43-111 (134)
44 2bou_A EGF-like module contain 97.5 4E-05 1.4E-09 68.7 3.4 85 101-199 19-132 (143)
45 2c4f_L Coagulation factor VII 97.4 3.6E-05 1.2E-09 69.1 2.0 67 233-309 52-130 (142)
46 2p26_A Integrin beta-2; hybrid 97.4 4.3E-05 1.5E-09 76.3 2.5 52 256-308 205-275 (280)
47 1edm_B Factor IX; epidermal gr 97.4 0.00012 4E-09 50.3 4.0 33 121-153 4-39 (39)
48 1nfu_B Coagulation factor XA, 97.4 3E-05 1E-09 73.4 1.0 65 233-309 47-122 (195)
49 1dx5_I Thrombomodulin; serine 97.4 4E-05 1.4E-09 66.6 1.6 82 98-197 21-111 (118)
50 2ygo_A WIF-1, WNT inhibitory f 97.4 0.0001 3.5E-09 68.4 4.0 36 118-154 146-181 (188)
51 2ygo_A WIF-1, WNT inhibitory f 97.3 9.5E-05 3.3E-09 68.5 3.1 40 269-311 143-183 (188)
52 1aut_L Activated protein C; se 97.3 0.00019 6.3E-09 61.9 4.3 60 235-306 21-88 (114)
53 2vh0_B Activated factor XA lig 97.3 5.6E-05 1.9E-09 67.2 1.0 65 233-309 47-122 (134)
54 1x7a_L Coagulation factor IX, 97.3 0.0001 3.4E-09 66.6 2.6 63 233-309 53-127 (146)
55 3h5c_B Vitamin K-dependent pro 97.2 0.00024 8.1E-09 72.3 5.4 67 120-197 5-76 (317)
56 1emn_A Fibrillin; extracellula 97.2 0.0003 1E-08 56.8 4.7 58 234-305 12-77 (82)
57 3h5c_B Vitamin K-dependent pro 97.2 0.00043 1.5E-08 70.3 6.8 60 233-305 10-77 (317)
58 2y38_A Laminin subunit alpha-5 97.1 0.00049 1.7E-08 71.9 6.3 28 126-153 267-301 (403)
59 1egf_A Epidermal growth factor 97.1 0.0006 2.1E-08 50.2 4.8 35 121-155 4-46 (53)
60 1a3p_A Epidermal growth factor 97.1 0.00039 1.3E-08 49.3 3.6 29 126-154 10-42 (45)
61 1uzk_A Fibrillin-1; glycoprote 97.0 5.1E-05 1.7E-09 69.6 -2.2 57 96-153 19-91 (162)
62 4aqt_A Laminin subunit gamma-1 97.0 0.00033 1.1E-08 72.8 3.6 28 126-153 256-287 (375)
63 2p26_A Integrin beta-2; hybrid 97.0 0.00039 1.3E-08 69.3 3.6 59 127-196 198-264 (280)
64 3ca7_A Protein spitz; argos, E 96.9 9.5E-05 3.3E-09 54.4 -0.9 39 258-309 3-49 (52)
65 1k36_A Epiregulin; EGF-like fo 96.9 0.00058 2E-08 48.8 3.0 33 121-154 4-44 (46)
66 1emn_A Fibrillin; extracellula 96.9 0.00091 3.1E-08 53.9 4.5 50 97-150 22-77 (82)
67 3zyj_B Netrin-G1; cell adhesio 96.7 0.00072 2.5E-08 71.0 3.5 43 266-313 360-403 (426)
68 2e26_A Reelin, reeler protein; 96.7 0.00052 1.8E-08 76.0 2.4 46 104-154 521-566 (725)
69 1z6c_A Vitamin K-dependent pro 96.6 0.0015 5.1E-08 53.2 3.9 58 236-309 13-79 (87)
70 1edm_B Factor IX; epidermal gr 96.5 0.0019 6.6E-08 44.0 3.5 28 281-308 8-39 (39)
71 1nql_B Epidermal growth factor 96.5 0.0012 4.3E-08 48.5 2.6 31 124-154 11-45 (53)
72 1hae_A Heregulin-alpha; growth 96.5 0.00077 2.6E-08 51.5 1.5 34 121-154 7-48 (63)
73 1z6c_A Vitamin K-dependent pro 96.4 0.001 3.6E-08 54.1 2.1 62 121-199 4-76 (87)
74 1lmj_A Fibrillin 1; EGF, calci 96.4 0.00087 3E-08 54.5 1.5 56 236-305 13-80 (86)
75 2k2s_B Micronemal protein 6; m 96.3 0.001 3.5E-08 50.5 1.0 34 121-154 12-51 (61)
76 2w2n_E LDL receptor, low-densi 96.2 0.0013 4.4E-08 56.0 1.5 40 143-196 19-60 (107)
77 1lmj_A Fibrillin 1; EGF, calci 96.2 0.0041 1.4E-07 50.4 4.2 50 97-150 21-80 (86)
78 1a3p_A Epidermal growth factor 96.2 0.0026 9E-08 44.9 2.6 27 283-309 10-42 (45)
79 1egf_A Epidermal growth factor 96.0 0.0053 1.8E-07 45.0 3.7 28 283-310 13-46 (53)
80 3ca7_A Protein spitz; argos, E 95.9 0.0025 8.4E-08 46.7 1.6 30 125-154 14-49 (52)
81 2w86_A Fibrillin-1, fibrillin1 95.9 0.001 3.5E-08 59.7 -0.7 47 139-198 89-141 (147)
82 2w2n_E LDL receptor, low-densi 95.9 0.0018 6.3E-08 55.0 0.9 44 257-305 49-101 (107)
83 3p5b_L Low density lipoprotein 95.9 0.0053 1.8E-07 64.4 4.6 62 122-197 2-71 (400)
84 1k36_A Epiregulin; EGF-like fo 95.9 0.0044 1.5E-07 44.1 2.7 27 282-309 12-44 (46)
85 1hae_A Heregulin-alpha; growth 95.6 0.0046 1.6E-07 47.1 2.2 30 281-310 11-49 (63)
86 2ddu_A Reelin; beta-jelly-roll 95.5 0.0022 7.5E-08 66.1 -0.1 32 278-309 192-225 (387)
87 3ltf_D Protein spitz; receptor 95.5 0.0056 1.9E-07 45.8 2.1 29 126-154 15-49 (58)
88 1nql_B Epidermal growth factor 95.5 0.003 1E-07 46.5 0.6 35 231-275 9-45 (53)
89 2fd6_A Urokinase-type plasmino 95.0 0.017 5.8E-07 50.1 3.9 35 126-160 2-41 (122)
90 2fd6_A Urokinase-type plasmino 94.9 0.0099 3.4E-07 51.6 2.1 61 235-308 2-63 (122)
91 1n7d_A LDL receptor, low-densi 94.8 0.12 4.1E-06 58.1 11.4 43 257-304 314-365 (699)
92 2ddu_A Reelin; beta-jelly-roll 94.8 0.0051 1.7E-07 63.4 -0.0 31 121-153 192-224 (387)
93 1n7d_A LDL receptor, low-densi 94.6 0.23 7.9E-06 55.8 13.0 20 177-196 304-325 (699)
94 3ltf_D Protein spitz; receptor 94.6 0.013 4.3E-07 43.9 1.7 28 283-310 15-50 (58)
95 4aqt_A Laminin subunit gamma-1 94.3 0.019 6.6E-07 59.5 2.9 16 185-200 271-286 (375)
96 2y38_A Laminin subunit alpha-5 94.3 0.036 1.2E-06 57.8 5.0 58 96-153 293-373 (403)
97 3v65_B Low-density lipoprotein 94.1 0.012 4.2E-07 61.1 1.2 61 121-195 4-73 (386)
98 1g1s_A P-selectin; selectin, l 93.9 0.019 6.6E-07 51.9 1.7 34 121-154 120-156 (162)
99 2k2s_B Micronemal protein 6; m 93.8 0.019 6.6E-07 43.3 1.4 31 279-309 13-51 (61)
100 3p5b_L Low density lipoprotein 93.8 0.025 8.6E-07 59.1 2.8 44 257-305 20-72 (400)
101 2rnl_A Amphiregulin; AR, color 93.8 0.049 1.7E-06 39.3 3.4 28 125-153 18-49 (50)
102 3m0c_C LDL receptor, low-densi 93.6 0.066 2.3E-06 61.1 5.9 42 257-303 332-382 (791)
103 1iox_A Betacellulin; EGF-like 93.1 0.037 1.3E-06 40.0 1.8 29 125-154 14-46 (50)
104 1q4g_A Prostaglandin G/H synth 93.1 0.039 1.3E-06 60.2 2.9 34 121-154 3-41 (553)
105 3v65_B Low-density lipoprotein 92.1 0.038 1.3E-06 57.4 1.1 47 257-308 23-83 (386)
106 1iox_A Betacellulin; EGF-like 91.6 0.07 2.4E-06 38.5 1.7 27 282-309 14-46 (50)
107 1g1s_A P-selectin; selectin, l 91.5 0.052 1.8E-06 49.0 1.1 28 282-309 125-156 (162)
108 3cfw_A L-selectin; EGF, cell a 91.4 0.11 3.7E-06 46.9 3.2 34 121-154 120-156 (164)
109 3nt1_A Prostaglandin-endoperox 91.2 0.087 3E-06 57.7 2.8 34 121-154 2-40 (587)
110 1q4g_A Prostaglandin G/H synth 91.0 0.077 2.6E-06 57.9 2.2 32 279-310 5-42 (553)
111 2i9a_A Urokinase-type plasmino 90.9 0.13 4.6E-06 45.8 3.3 35 126-160 14-53 (145)
112 3e50_C Protransforming growth 90.9 0.14 4.7E-06 37.0 2.6 29 125-154 14-46 (50)
113 3m0c_C LDL receptor, low-densi 90.9 0.14 4.7E-06 58.5 4.1 57 127-196 281-343 (791)
114 2rnl_A Amphiregulin; AR, color 90.5 0.16 5.5E-06 36.6 2.8 26 282-308 18-49 (50)
115 3cfw_A L-selectin; EGF, cell a 90.2 0.12 4.2E-06 46.5 2.4 28 282-309 125-156 (164)
116 3e50_C Protransforming growth 90.1 0.17 6E-06 36.4 2.6 27 282-309 14-46 (50)
117 1xdt_R Hbegf, heparin-binding 89.4 0.17 5.9E-06 40.0 2.3 28 125-153 46-77 (79)
118 3nt1_A Prostaglandin-endoperox 89.1 0.14 4.8E-06 56.1 2.2 32 279-310 4-41 (587)
119 1g1t_A E-selectin; EGF, adhesi 88.1 0.15 5.1E-06 45.5 1.3 34 121-154 120-156 (157)
120 2i9a_A Urokinase-type plasmino 87.0 0.23 8E-06 44.2 1.9 28 283-310 14-48 (145)
121 1g1t_A E-selectin; EGF, adhesi 86.2 0.18 6.1E-06 45.0 0.7 28 282-309 125-156 (157)
122 1xdt_R Hbegf, heparin-binding 85.5 0.35 1.2E-05 38.3 2.0 26 282-308 46-77 (79)
123 3t3p_B Integrin beta-3; integr 85.4 0.4 1.4E-05 50.8 3.0 26 282-307 446-472 (472)
124 3g5c_A ADAM 22; alpha/beta fol 82.8 0.53 1.8E-05 50.7 2.6 33 121-154 445-482 (510)
125 3t3p_B Integrin beta-3; integr 81.7 0.68 2.3E-05 49.1 2.9 25 126-152 447-472 (472)
126 3asi_A Neurexin-1-alpha; beta- 80.2 0.91 3.1E-05 47.3 3.3 34 121-154 186-223 (410)
127 1ob1_C Major merozoite surface 77.9 2 6.9E-05 35.3 3.9 66 234-308 10-94 (99)
128 3g5c_A ADAM 22; alpha/beta fol 77.8 0.95 3.2E-05 48.7 2.5 30 282-311 454-484 (510)
129 1ob1_C Major merozoite surface 74.1 2.7 9.1E-05 34.6 3.7 64 121-195 5-83 (99)
130 1n1i_A Merozoite surface prote 72.0 4.8 0.00017 33.3 4.7 62 121-195 11-84 (105)
131 3v4v_B Integrin beta-7; cell a 71.3 0.83 2.8E-05 48.7 0.0 26 126-153 468-494 (503)
132 3asi_A Neurexin-1-alpha; beta- 69.8 2.6 8.8E-05 43.8 3.4 29 281-309 190-223 (410)
133 3fl7_A Ephrin receptor; ATP-bi 69.2 4 0.00014 44.2 4.8 44 257-306 262-323 (536)
134 3v4v_B Integrin beta-7; cell a 68.0 1.1 3.7E-05 47.8 0.0 28 282-309 467-495 (503)
135 1n1i_A Merozoite surface prote 67.6 3.9 0.00013 33.9 3.3 66 235-310 17-97 (105)
136 3qcw_A Neurexin-1-alpha; synap 64.7 3.7 0.00013 49.2 3.7 34 121-154 1018-1055(1245)
137 1gl4_A Nidogen-1, entactin; im 63.5 2.3 7.9E-05 42.0 1.4 30 120-149 5-39 (285)
138 1apq_A Complement protease C1R 59.3 6.1 0.00021 27.9 2.7 22 126-149 21-44 (53)
139 1jlz_A Tityustoxin alpha-KTX; 56.9 2.5 8.5E-05 25.9 0.2 20 280-299 5-24 (26)
140 3qcw_A Neurexin-1-alpha; synap 53.2 6.8 0.00023 46.9 3.3 33 121-153 620-656 (1245)
141 1cmr_A Charybdotoxin, alpha ch 50.1 11 0.00038 24.0 2.4 15 285-299 17-31 (31)
142 3fl7_A Ephrin receptor; ATP-bi 47.1 6.9 0.00023 42.3 1.8 65 126-195 251-319 (536)
143 2kl7_A Fibulin-4; secreted, ca 45.9 9.2 0.00032 29.3 1.9 28 121-148 4-37 (71)
144 2jkh_L Factor X light chain; p 44.9 9.8 0.00034 27.4 1.8 26 126-153 10-41 (55)
145 1szb_A Mannose binding lectin- 43.7 8.2 0.00028 34.6 1.5 37 107-147 113-157 (170)
146 1pvz_A K+ toxin-like peptide; 43.5 4.3 0.00015 26.0 -0.3 18 280-297 13-30 (31)
147 2ktc_A Potassium channel toxin 41.5 7.9 0.00027 24.7 0.7 23 122-146 7-32 (34)
148 1gl4_A Nidogen-1, entactin; im 39.0 10 0.00034 37.4 1.4 26 282-307 13-44 (285)
149 1wz5_A Potassium channel block 37.1 8.7 0.0003 25.3 0.4 16 285-300 20-35 (35)
150 2lix_A IMKTX104, potassium cha 39.9 8.7 0.0003 22.7 0.0 11 287-297 16-26 (27)
151 1bah_A Charybdotoxin, chabii; 30.9 14 0.00048 24.6 0.6 15 285-299 23-37 (37)
152 1szb_A Mannose binding lectin- 28.9 14 0.00047 33.0 0.4 35 265-302 113-157 (170)
153 3t5o_A Complement component C6 26.6 33 0.0011 39.5 3.2 32 122-154 501-534 (913)
154 1zlg_A Anosmin 1; insulin-like 23.7 66 0.0022 35.3 4.9 33 279-312 123-155 (680)
155 1nzi_A Complement C1S componen 22.4 37 0.0013 29.6 2.0 25 121-147 118-148 (159)
156 1tsk_A TS KAPA; scorpion, toxi 21.8 20 0.00068 23.6 0.1 13 285-297 23-35 (35)
157 1big_A Toxin BMTX1; scorpion, 21.4 46 0.0016 22.1 1.8 15 285-299 23-37 (37)
158 1wmt_A ISTX; neurotoxin, potas 20.5 52 0.0018 22.4 2.0 16 285-300 23-38 (41)
159 1hp2_A Tityustoxin K alpha; K+ 20.1 48 0.0016 22.0 1.7 15 285-299 23-37 (37)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.71 E-value=9.1e-18 Score=173.00 Aligned_cols=156 Identities=27% Similarity=0.600 Sum_probs=63.0
Q ss_pred CCCCCCCCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCC--CcccCCCCeEecCCCcccC
Q 008406 120 GKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTRAMCFCGEGTKYP 197 (567)
Q Consensus 120 ~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~g~C~C~~G~~G~ 197 (567)
..+|++.|+++|+|+. .++|.|++||+|+.|+.. .|.. .|. |.|.. .+.|.|.+||.|.
T Consensus 148 ~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~G~C~~-~~~C~C~~G~~G~ 208 (324)
T 2ygq_A 148 QAECPGGCRNGGFCNE-RRICECPDGFHGPHCEKA---LCTP--------------RCMNGGLCVT-PGFCICPPGFYGV 208 (324)
T ss_dssp CCCCSSCCCSSCEECT-TSCEECCTTEESSSSCEE---SSSS--------------CCCTTCEECS-SCCEECCTTCBTT
T ss_pred CCCCCCCCCCCCEECC-CCeEECCCCCcCCCCCCC---CCCC--------------CCCCCCEEcC-CCEEeCCCCccCC
Confidence 3678889999999985 689999999999999974 3432 243 45543 5799999999999
Q ss_pred CCCCCCCCCCccC-CCCC---CCCCCCCCCCCCCCCCc-cCCCCCCCcccCCCcccccccccccccccccCCCCCCCccc
Q 008406 198 NRPVAEACGFQVN-LPSQ---PGAPKSTDWAKADLDNI-FTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFC 272 (567)
Q Consensus 198 ~C~~~~~C~~~~~-~~~c---~~~~c~~gw~g~~c~~~-~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C 272 (567)
.|+.. .|..... ...| ..+.|.+||.|..|+.. ...+|.++|.|.. .++|.|. +||+|..|
T Consensus 209 ~C~~~-~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~------------~~~C~C~-~G~~G~~C 274 (324)
T 2ygq_A 209 NCDKA-NCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG------------KSKCKCS-KGYQGDLC 274 (324)
T ss_dssp TTCBC-CCSSCCCSSCCBSCSSCBCCCTTCCTTTTC--------------------------------------------
T ss_pred CcccC-cCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC------------CCEEECC-CCCcCCCC
Confidence 88642 2421111 0111 12457899999999732 2356778888852 4799999 99999999
Q ss_pred ccccCCccCCCCCCCeeee-CCeeecCCCcccCCCCCCcc
Q 008406 273 EVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (567)
Q Consensus 273 e~~~~~~C~~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~ 311 (567)
+.+ .|.+.|+++|+|+ .+.|.|.+||+|.+|+....
T Consensus 275 ~~~---~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~~ 311 (324)
T 2ygq_A 275 SKP---VCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYE 311 (324)
T ss_dssp ----------------------------------------
T ss_pred cCC---CCCCCCCCCCEECCCCEeECCCCCcCCCCCCCCc
Confidence 965 6888999999998 78999999999999998753
No 2
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.61 E-value=9e-16 Score=171.68 Aligned_cols=163 Identities=23% Similarity=0.369 Sum_probs=118.4
Q ss_pred cCCcee---ecCCCCCccccccCcc------CCCCCCC-----CCCCCCEEecCCCeEEeC----CCCcCCCCCcccccc
Q 008406 97 EIGRWL---SGCDSVAKEVDLVEMI------GGKSCKS-----DCSGQGVCNHELGQCRCF----HGFRGKGCSERIHFQ 158 (567)
Q Consensus 97 ~~G~~~---~~C~~g~~g~~~~~~~------~~~~C~~-----~Cs~~G~C~~~~G~C~C~----~G~~G~~Ce~~~~~~ 158 (567)
..|.+. +.|.+||.|..|+... ...+|.. .|+++|+|+ .|+|.|+ +||+|..|+.. ...
T Consensus 451 g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~Gy~G~~Ce~~-~~~ 527 (690)
T 3fcs_B 451 GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFGKITGKYCECD-DFS 527 (690)
T ss_dssp TSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSCCCBSTTSCBC-SSC
T ss_pred CCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCCCeeCCCcCcc-cCc
Confidence 467887 8899999999997443 1256842 499999998 7999999 99999999863 345
Q ss_pred CCCCCCCCCCCCCcccccCCCcccCCCCeEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCC
Q 008406 159 CNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSK 238 (567)
Q Consensus 159 C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~ 238 (567)
|.... +..|.+...+..+.|.|.+||.|..|+ |.. ....|. ...+..|.+
T Consensus 528 C~~~~----------~~~C~~~G~C~~g~C~C~~Gy~G~~Ce----C~~--~~~~C~--------------~~~g~~C~~ 577 (690)
T 3fcs_B 528 CVRYK----------GEMCSGHGQCSCGDCLCDSDWTGYYCN----CTT--RTDTCM--------------SSNGLLCSG 577 (690)
T ss_dssp CCBSS----------SSBGGGSEEEETTEEEECTTEESSSSC----EEC--CCTTTB--------------CTTSSBTSS
T ss_pred CcCCC----------CCCCCCCCEecCCeeECcCCCcCCCCc----cCC--CCCccc--------------CCCCCCCCC
Confidence 65321 125653333344999999999998885 100 001111 011246778
Q ss_pred CcccCCCccccccccccccccccc-CCCCCCCcccccccCCccCCCCCCCeeeeCCeeecCCCcccCCCCCCccc
Q 008406 239 PGWCNVDPEEAYALKVQFKEECDC-KYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (567)
Q Consensus 239 ~G~C~~~~~~~~~~g~c~~g~C~C-~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~~~~~ 312 (567)
+|.|. .++|.| . +||+|..|+.. ..|+++|.++|+|+. |..||+|..|+...+.
T Consensus 578 ~G~C~-------------~g~C~C~~-~Gy~G~~Ce~C--~~C~~~C~~~g~Cv~----C~~g~tG~~C~~~~C~ 632 (690)
T 3fcs_B 578 RGKCE-------------CGSCVCIQ-PGSYGDTCEKC--PTCPDACTFKKECVE----CKKFDRGALHDENTCN 632 (690)
T ss_dssp SCEEE-------------TTEEECCS-TTCBSTTSCBC--TTSCCTTTSCCGGGT----TTTTCCSSSSSSSCST
T ss_pred CCEEe-------------CCEEECCC-CCccCCCcCcC--CCCCCCCCCCCCccc----CCCCCccCCCCccccc
Confidence 88883 679999 8 99999999972 268899999999987 9999999988776554
No 3
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.56 E-value=6.8e-15 Score=164.58 Aligned_cols=138 Identities=27% Similarity=0.625 Sum_probs=99.3
Q ss_pred CCC-CCCEEecCCCeEEeCCCCcCCCCCccc-------cccCCCCCCCCCCCCCcccccCCCcccCCCCeEecC----CC
Q 008406 126 DCS-GQGVCNHELGQCRCFHGFRGKGCSERI-------HFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCG----EG 193 (567)
Q Consensus 126 ~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce~~~-------~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~----~G 193 (567)
.|+ ++|.|. .|.|.|++||+|..|+... ...|.... ....|.+...+..+.|.|. +|
T Consensus 447 ~C~~g~G~~~--~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~---------~~~~Cs~~G~C~~g~C~C~~~~~~G 515 (690)
T 3fcs_B 447 RCNNGNGTFE--CGVCRCGPGWLGSQCECSEEDYRPSQQDECSPRE---------GQPVCSQRGECLCGQCVCHSSDFGK 515 (690)
T ss_dssp TTTTTSEEEE--TTEEEECTTCCSSSSCCSCC------CCCCSSSS---------SSCGGGGSEEECSSSEEECCCSSCC
T ss_pred cccCCCCeEe--CCceEeCCCccCCceeeccCccCCccCCcCCCCC---------CCCCCCCCCEEECCeeEeecCCCCC
Confidence 476 677886 8899999999999998642 12343211 1135765544557999999 99
Q ss_pred cccCCCCCC-CCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCccc
Q 008406 194 TKYPNRPVA-EACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFC 272 (567)
Q Consensus 194 ~~G~~C~~~-~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~C 272 (567)
|.|..|+.. ..| . ......|.++|.|. .++|.|. +||+|..|
T Consensus 516 y~G~~Ce~~~~~C---------~--------------~~~~~~C~~~G~C~-------------~g~C~C~-~Gy~G~~C 558 (690)
T 3fcs_B 516 ITGKYCECDDFSC---------V--------------RYKGEMCSGHGQCS-------------CGDCLCD-SDWTGYYC 558 (690)
T ss_dssp CBSTTSCBCSSCC---------C--------------BSSSSBGGGSEEEE-------------TTEEEEC-TTEESSSS
T ss_pred eeCCCcCcccCcC---------c--------------CCCCCCCCCCCEec-------------CCeeECc-CCCcCCCC
Confidence 999888521 112 1 01123567778883 5899999 99999999
Q ss_pred ccc-cCCccC----CCCCCCeeeeCCeeec-CCCcccCCCCC-Ccc
Q 008406 273 EVP-VSSTCV----NQCSGHGHCRGGFCQC-DSGWYGVDCSI-PSV 311 (567)
Q Consensus 273 e~~-~~~~C~----~~Cs~~G~C~~G~C~C-~~G~~G~~C~~-~~~ 311 (567)
+.+ ....|. ..|+++|+|+.+.|.| .+||+|..|++ +.+
T Consensus 559 eC~~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~Ce~C~~C 604 (690)
T 3fcs_B 559 NCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTC 604 (690)
T ss_dssp CEECCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTTSCBCTTS
T ss_pred ccCCCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCCcCcCCCC
Confidence 932 134665 4799999999999999 99999999998 544
No 4
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.56 E-value=2.7e-15 Score=140.34 Aligned_cols=144 Identities=26% Similarity=0.575 Sum_probs=103.0
Q ss_pred CCceeecCCCCCccccccCccCCCCCC--CCCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccc
Q 008406 98 IGRWLSGCDSVAKEVDLVEMIGGKSCK--SDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVS 175 (567)
Q Consensus 98 ~G~~~~~C~~g~~g~~~~~~~~~~~C~--~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~ 175 (567)
...+.+.|.+||.|..|.. .|. .+|+++|+|+. +|+|.|++||+|..|+.. .|..
T Consensus 14 ~~~~~c~C~~g~~G~~C~~-----~C~~~~~c~~~g~C~~-~g~C~C~~G~~G~~C~~~---~C~~-------------- 70 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGFGCNK-----FCRPRDDFFGHYACDQ-NGNKTCMEGWMGPECNRA---ICRQ-------------- 70 (169)
T ss_dssp -------CCTTEETTTTCE-----ECCCEEETTEEEEECS-SCCEEECTTEESTTSCEE---CCCT--------------
T ss_pred ccCeeeeCCCcCcCCCccc-----ccCCCCCcCCCCEeCC-CCeeECCCCCcCCCCCCC---CCCC--------------
Confidence 4677788999999998874 463 36999999985 899999999999999974 2432
Q ss_pred cCC---CcccCCCCeEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCccccccc
Q 008406 176 ICP---THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYAL 252 (567)
Q Consensus 176 ~C~---g~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~ 252 (567)
.|. +.|.. .++|.|.+||.|..|+. |.. ...|. +|.|..
T Consensus 71 ~C~~~~g~C~~-~~~C~C~~G~~G~~C~~---C~~-------------------------~~~C~-~g~C~~-------- 112 (169)
T 2vj2_A 71 GCSPKHGSCKL-PGDCRCQYGWQGLYCDK---CIP-------------------------HPGCV-HGICNE-------- 112 (169)
T ss_dssp TCCTTTEECSS-TTCCEECTTEESSSSCE---ECC-------------------------CTTCS-SEECSS--------
T ss_pred CCCCCCcccCC-CCeeECCCCCCCCCccc---CCC-------------------------CCCCC-CCCcCC--------
Confidence 132 34443 57899999999877632 210 11243 357751
Q ss_pred ccccccccccCCCCCCCcccccccCCccC--CCCCCCeeeeC-----CeeecCCCcccCCCCC
Q 008406 253 KVQFKEECDCKYDGLLGQFCEVPVSSTCV--NQCSGHGHCRG-----GFCQCDSGWYGVDCSI 308 (567)
Q Consensus 253 g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~--~~Cs~~G~C~~-----G~C~C~~G~~G~~C~~ 308 (567)
.++|.|. +||+|..|+..+ ..|. ++|.++|+|++ +.|.|++||+|.+|++
T Consensus 113 ----~~~C~C~-~G~~G~~C~~~~-~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 113 ----PWQCLCE-TNWGGQLCDKDL-NYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp ----TTCCEEC-TTEETTTTCEES-CHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred ----CCEEeCC-CCCCCCcccCCC-CCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 5899999 999999998653 3554 78999999973 6999999999999975
No 5
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.55 E-value=2.5e-15 Score=167.70 Aligned_cols=137 Identities=29% Similarity=0.632 Sum_probs=96.2
Q ss_pred CCCCCCCCEEecCCCeEEeCCCCcCCCCCcccc--------ccCCCCCCCCCCCCCcccccCCCcccCCCCeEecC----
Q 008406 124 KSDCSGQGVCNHELGQCRCFHGFRGKGCSERIH--------FQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCG---- 191 (567)
Q Consensus 124 ~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~--------~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~---- 191 (567)
+..|+++|+|. .|+|.|.+||+|..|+.... ..|.... ....|.+...+..|+|.|.
T Consensus 434 s~~Cs~~G~C~--~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~---------~~~~Cs~~G~C~~G~C~C~~~~~ 502 (687)
T 3k6s_B 434 RSLCHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN---------NSIICSGLGDCVCGQCLCHTSDV 502 (687)
T ss_dssp SSTGGGSEEES--SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSST---------TSCGGGSSEEEETTEEEECCCCS
T ss_pred CCCCCCCCEEe--CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCC---------CCCcCCCCCEEeCCEEEcCCCCC
Confidence 34699999998 89999999999999995311 1243211 1134765444447899999
Q ss_pred --CCcccCCCCCC-CCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCC--CcccCCCcccccccccccccccccCCCC
Q 008406 192 --EGTKYPNRPVA-EACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSK--PGWCNVDPEEAYALKVQFKEECDCKYDG 266 (567)
Q Consensus 192 --~G~~G~~C~~~-~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~--~G~C~~~~~~~~~~g~c~~g~C~C~~~G 266 (567)
+||.|..|+.. ..|.. .....|.+ +|.| ..++|.|. +|
T Consensus 503 ~~~G~~G~~Ce~~~~~C~~-----------------------~~~~~C~~~~~G~C-------------~~g~C~C~-~G 545 (687)
T 3k6s_B 503 PGKLIYGQYCECDTINCER-----------------------YNGQVCGGPGRGLC-------------FCGKCRCH-PG 545 (687)
T ss_dssp TTCCEESTTSCEESSCSCE-----------------------ETTEETSHHHHEEE-------------ETTEEEEC-TT
T ss_pred CCCCccccccccccccccC-----------------------CCCcCcCCCCCCeE-------------ECCEEEcC-CC
Confidence 99999888521 11210 00223555 6666 35789998 99
Q ss_pred CCCccccccc-CCccCC----CCCCCeeeeCCeeecCCCcccCCCCC
Q 008406 267 LLGQFCEVPV-SSTCVN----QCSGHGHCRGGFCQCDSGWYGVDCSI 308 (567)
Q Consensus 267 ~~G~~Ce~~~-~~~C~~----~Cs~~G~C~~G~C~C~~G~~G~~C~~ 308 (567)
|+|..|+.+. ...|.. .|+++|+|+.|.|.|.+||+|..|++
T Consensus 546 ~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 546 FEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQE 592 (687)
T ss_dssp CCSTTSCSCCSSCTTBCTTCSBTSSSCCBCSSCBCCSTTCCTTTTCC
T ss_pred CcCCCCccCCCCCCCCCCCCCCCCCCCcCCCCEEECCCCCcCCCCCC
Confidence 9999998432 245654 59999999999999999999999987
No 6
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.52 E-value=1.3e-14 Score=161.94 Aligned_cols=156 Identities=23% Similarity=0.428 Sum_probs=107.3
Q ss_pred eecCCCCCccccccCccC-------CCCCCC-----CCCCCCEEecCCCeEEeC------CCCcCCCCCccccccCCCCC
Q 008406 102 LSGCDSVAKEVDLVEMIG-------GKSCKS-----DCSGQGVCNHELGQCRCF------HGFRGKGCSERIHFQCNFPK 163 (567)
Q Consensus 102 ~~~C~~g~~g~~~~~~~~-------~~~C~~-----~Cs~~G~C~~~~G~C~C~------~G~~G~~Ce~~~~~~C~~~~ 163 (567)
.+.|.+||.|..|+-... ...|.. .|+++|+|+ .|+|.|+ +||+|..|+.. ...|....
T Consensus 447 ~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C~C~~~~~~~~G~~G~~Ce~~-~~~C~~~~ 523 (687)
T 3k6s_B 447 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECD-TINCERYN 523 (687)
T ss_dssp SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEEEECCCCSTTCCEESTTSCEE-SSCSCEET
T ss_pred EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEEEcCCCCCCCCCccccccccc-cccccCCC
Confidence 467899999999883221 125732 399999999 7999999 99999999953 24565321
Q ss_pred CCCCCCCCcccccCCC--cccCCCCeEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcc
Q 008406 164 TPELPYGRWVVSICPT--HCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGW 241 (567)
Q Consensus 164 ~~~~~~g~~~~~~C~g--~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~ 241 (567)
+..|.+ +..+..|+|.|.+||.|..|+.. .....| .......|+++|.
T Consensus 524 ----------~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~------~~~~~C--------------~~~~g~~Cs~~G~ 573 (687)
T 3k6s_B 524 ----------GQVCGGPGRGLCFCGKCRCHPGFEGSACQCE------RTTEGC--------------LNPRRVECSGRGR 573 (687)
T ss_dssp ----------TEETSHHHHEEEETTEEEECTTCCSTTSCSC------CSSCTT--------------BCTTCSBTSSSCC
T ss_pred ----------CcCcCCCCCCeEECCEEEcCCCCcCCCCccC------CCCCCC--------------CCCCCCCCCCCCc
Confidence 124654 44444689999999999888511 000111 1011345778888
Q ss_pred cCCCcccccccccccccccccCCCCCCCcccccccCCccCCCCCCCeeeeCCeeec-CCCcccCCCCC
Q 008406 242 CNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQC-DSGWYGVDCSI 308 (567)
Q Consensus 242 C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C-~~G~~G~~C~~ 308 (567)
|. .++|.|. +||+|..|+.. ..|+++|.++|+|+ .|.| ..|..+..|+.
T Consensus 574 C~-------------~g~C~C~-~Gy~G~~Ce~c--~~C~~~C~~~g~Cv--~C~~~~~G~~~~~C~~ 623 (687)
T 3k6s_B 574 CR-------------CNVCECH-SGYQLPLCQEC--PGCPSPCGKYISCA--ECLKFEKGPFGKNCSA 623 (687)
T ss_dssp BC-------------SSCBCCS-TTCCTTTTCCC--TTSCCCCTTTHHHH--TTTTSCSCCCSSCSSS
T ss_pred CC-------------CCEEECC-CCCcCCCCCCC--CCCCcccCCCCCCC--cccCCCCCCCCccccc
Confidence 84 5789998 99999999973 26889999999998 3554 34555566654
No 7
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.46 E-value=6.3e-14 Score=149.29 Aligned_cols=165 Identities=19% Similarity=0.353 Sum_probs=111.5
Q ss_pred ceeecCCCCCccccccCccCCCCCCCCCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcc-cccCC
Q 008406 100 RWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWV-VSICP 178 (567)
Q Consensus 100 ~~~~~C~~g~~g~~~~~~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~-~~~C~ 178 (567)
...+.|..||.|..|.. .|. +|+++|+|+..+|+|.|++||+|..|+.. |........+...|. ...|.
T Consensus 184 ~~~c~C~~g~~G~~C~~-----~C~-~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~----C~~g~~g~~C~~~C~~~~~C~ 253 (423)
T 2gy5_A 184 LIVRRCEAQKWGPECNH-----LCT-ACMNNGVCHEDTGECICPPGFMGRTCEKA----CELHTFGRTCKERCSGQEGCK 253 (423)
T ss_dssp EEECSSCTTEESTTSCE-----ECC-CCCTTCEECTTTCCEECCTTEESTTSCEE----CCTTEESTTSCEECCSTTTTT
T ss_pred ccCCcCCCCCCCCCCCC-----CCC-CCCCCCEEECCCCcEeCCCCccCCCcccc----cCCCCCCCCcCccCCCCCCCC
Confidence 44567899998887764 343 69999999987899999999999999963 221100000000000 01243
Q ss_pred --CcccCCCCeEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCccccccccccc
Q 008406 179 --THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQF 256 (567)
Q Consensus 179 --g~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~ 256 (567)
+.|+...++|.|.+||.|.+|+. .|.+||.|.+|+. ..+|.++|.|...
T Consensus 254 ~~g~C~~~~~~C~C~~G~~G~~C~~----------------~C~~G~~G~~C~~--~C~C~ngg~C~~~----------- 304 (423)
T 2gy5_A 254 SYVFCLPDPYGCSCATGWKGLQCNE----------------ACHPGFYGPDCKL--RCSCNNGEMCDRF----------- 304 (423)
T ss_dssp TCCEEETTTTEEECCBTCBSGGGCB----------------CCCTTBCSBTTCC--BCCCTTCCEEETT-----------
T ss_pred CCCEECCCCCeEEeCCCcccccccC----------------ccCCCCcCCcccc--cccCCCCCEecCC-----------
Confidence 45665678999999999887742 2457889988874 2478888999642
Q ss_pred ccccccCCCCCCCcccccccCCccCCCCCCCeee-eCCeeecCCCcccCCCCCCc
Q 008406 257 KEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHC-RGGFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 257 ~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C-~~G~C~C~~G~~G~~C~~~~ 310 (567)
..|.|+ +||+|.+|+... ++ ......+ ..+.|.|.+||+|..|+...
T Consensus 305 -~~C~C~-~G~~G~~Ce~~~---~~--~~~~~~~~~~~~~~c~~g~~g~~C~~~~ 352 (423)
T 2gy5_A 305 -QGCLCS-PGWQGLQCEREG---IP--RMTPKIVDLPDHIEVNSGKFNPICKASG 352 (423)
T ss_dssp -TEEECC-TTCBSTTSCBCS---SC--CCCCEECSCCSBCCEESEEECCEEEEEC
T ss_pred -CceECC-CCCcCCCCccCc---cC--CcCcceecCCCeEEeCCCccCCcccccC
Confidence 349999 999999999652 11 1111112 25679999999999887544
No 8
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.33 E-value=1e-12 Score=140.02 Aligned_cols=164 Identities=19% Similarity=0.316 Sum_probs=105.4
Q ss_pred CCceeecCCCCCccccccCccCCCCCCCCCCCCCEE----ec---------CCCeEEeCCCCcCCCCCccccccCCCCCC
Q 008406 98 IGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVC----NH---------ELGQCRCFHGFRGKGCSERIHFQCNFPKT 164 (567)
Q Consensus 98 ~G~~~~~C~~g~~g~~~~~~~~~~~C~~~Cs~~G~C----~~---------~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~ 164 (567)
.|.|.+.|+.++.+..++......+| .+.|.+ .. ....|.|++||.|+.|+.. +.+|.+
T Consensus 136 nGs~~~~~p~~~~~~~~~~~~~~~~~----~d~g~y~~~~~~g~~~~~~~~~~~~c~C~~g~~G~~C~~~-C~~C~~--- 207 (423)
T 2gy5_A 136 NGSFIHSVPRHEVPDILEVHLPHAQP----QDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNHL-CTACMN--- 207 (423)
T ss_dssp TTEEEEEECGGGCCSEEEEEETTCCG----GGCEEEEEEETTCCGGGCEEEEEEECSSCTTEESTTSCEE-CCCCCT---
T ss_pred CCeEeeccCccccCCeEEeccCcCCC----CCCCeEeeEECCCcEeccccccccCCcCCCCCCCCCCCCC-CCCCCC---
Confidence 36788888877766655432211222 222321 10 0125899999999999973 233332
Q ss_pred CCCCCCCcccccCCCcccCCCCeEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCcc--CCCCCCCccc
Q 008406 165 PELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIF--TTNGSKPGWC 242 (567)
Q Consensus 165 ~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~--~~~C~~~G~C 242 (567)
.|.|+...++|.|++||.|.+|+. .| ..++.|..|.+.. ...|.+++.|
T Consensus 208 -------------~G~C~~~~g~C~C~~G~~G~~Ce~--~C--------------~~g~~g~~C~~~C~~~~~C~~~g~C 258 (423)
T 2gy5_A 208 -------------NGVCHEDTGECICPPGFMGRTCEK--AC--------------ELHTFGRTCKERCSGQEGCKSYVFC 258 (423)
T ss_dssp -------------TCEECTTTCCEECCTTEESTTSCE--EC--------------CTTEESTTSCEECCSTTTTTTCCEE
T ss_pred -------------CCEEECCCCcEeCCCCccCCCccc--cc--------------CCCCCCCCcCccCCCCCCCCCCCEE
Confidence 256777778999999999988853 12 2445555554211 2345556666
Q ss_pred CCCcccccccccccccccccCCCCCCCccccccc-----CCccCC--CCCCCeeee-CCeeecCCCcccCCCCCCc
Q 008406 243 NVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV-----SSTCVN--QCSGHGHCR-GGFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 243 ~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~-----~~~C~~--~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~ 310 (567)
.. ..++|.|+ +||+|.+|+... ...|.. +|.++|+|+ ...|.|++||+|.+|+...
T Consensus 259 ~~-----------~~~~C~C~-~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~C~C~~G~~G~~Ce~~~ 322 (423)
T 2gy5_A 259 LP-----------DPYGCSCA-TGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREG 322 (423)
T ss_dssp ET-----------TTTEEECC-BTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTEEECCTTCBSTTSCBCS
T ss_pred CC-----------CCCeEEeC-CCcccccccCccCCCCcCCcccccccCCCCCEecCCCceECCCCCcCCCCccCc
Confidence 43 26899998 999999998621 112321 689999998 3459999999999999864
No 9
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.33 E-value=1.1e-12 Score=134.89 Aligned_cols=150 Identities=20% Similarity=0.424 Sum_probs=67.2
Q ss_pred eeeeCCcccccCCceeecCCCCCccccccCccCCCCCCCCCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCC
Q 008406 87 VVYRNAPWKAEIGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPE 166 (567)
Q Consensus 87 ~~~~~~~~~~~~G~~~~~C~~g~~g~~~~~~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~ 166 (567)
..|.++.... ..+.+.|.+||.|..|+. ..|...|+++|+|+. .+.|.|++||+|..|+.. .|..
T Consensus 153 ~~C~~~G~C~--~~~~C~C~~G~~G~~C~~----~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~---~C~~----- 217 (324)
T 2ygq_A 153 GGCRNGGFCN--ERRICECPDGFHGPHCEK----ALCTPRCMNGGLCVT-PGFCICPPGFYGVNCDKA---NCST----- 217 (324)
T ss_dssp SCCCSSCEEC--TTSCEECCTTEESSSSCE----ESSSSCCCTTCEECS-SCCEECCTTCBTTTTCBC---CCSS-----
T ss_pred CCCCCCCEEC--CCCeEECCCCCcCCCCCC----CCCCCCCCCCCEEcC-CCEEeCCCCccCCCcccC---cCCC-----
Confidence 3455443322 257789999999988874 468778999999985 689999999999999974 2432
Q ss_pred CCCCCcccccCC--CcccCCCCeEecCCCcccCCCCCCCCCCCccC-CCCC---CCCCCCCCCCCCCCCCc-cCCCCCCC
Q 008406 167 LPYGRWVVSICP--THCDTTRAMCFCGEGTKYPNRPVAEACGFQVN-LPSQ---PGAPKSTDWAKADLDNI-FTTNGSKP 239 (567)
Q Consensus 167 ~~~g~~~~~~C~--g~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~-~~~c---~~~~c~~gw~g~~c~~~-~~~~C~~~ 239 (567)
.|. |.|.. .+.|.|.+||.|..|+. ..|..... ...| ..+.|.+||.|..|+.. ....|.++
T Consensus 218 ---------~C~~~G~C~~-~~~C~C~~G~~G~~C~~-~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~ 286 (324)
T 2ygq_A 218 ---------TCFNGGTCFY-PGKCICPPGLEGEQCEI-SKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAH 286 (324)
T ss_dssp ---------CCCSSCCBSC-SSCBCCCTTCCTTTTC--------------------------------------------
T ss_pred ---------CCCCCCeeCC-CCeeeCCCCccCCCCCc-CcCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCC
Confidence 343 45544 47999999999999864 23321110 0111 12457899999999732 23467788
Q ss_pred cccCCCcccccccccccccccccCCCCCCCcccccc
Q 008406 240 GWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (567)
Q Consensus 240 G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~ 275 (567)
|.|.. .++|.|. +||+|.+|+..
T Consensus 287 g~C~~------------~~~C~C~-~G~~G~~C~~~ 309 (324)
T 2ygq_A 287 GTCHE------------PNKCQCQ-EGWHGRHCNKR 309 (324)
T ss_dssp ------------------------------------
T ss_pred CEECC------------CCEeECC-CCCcCCCCCCC
Confidence 88853 5799999 99999999875
No 10
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.31 E-value=1.2e-12 Score=126.53 Aligned_cols=62 Identities=32% Similarity=0.755 Sum_probs=51.3
Q ss_pred CCCCCCcccCCCcccccccccccccccccCCCC------CCCcccccccCCccCC----CCCCC--eeeeCCeeecCCCc
Q 008406 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDG------LLGQFCEVPVSSTCVN----QCSGH--GHCRGGFCQCDSGW 301 (567)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G------~~G~~Ce~~~~~~C~~----~Cs~~--G~C~~G~C~C~~G~ 301 (567)
.+|+++|.|. .++|.|. +| |+|.+|+.. ...|+. .|+++ |+|+.|.|.|.+||
T Consensus 143 ~~Csg~G~C~-------------~g~C~C~-~gw~~~~~~~G~~Ce~~-~~~C~~~~g~~C~~~~~G~C~~g~C~C~~G~ 207 (217)
T 2p28_B 143 IICSGLGDCV-------------CGQCLCH-TSDVPGKLIYGQYCECD-TINCERYNGQVCGGPGRGLCFCGKCRCHPGF 207 (217)
T ss_dssp CBGGGTEEEE-------------TTEEEEC-CCCSTTCCEESTTSCEE-SSCSCEETTEETTCTTTEEEETTEEEECTTE
T ss_pred CCCCCCCEEe-------------CCceECC-CCCCCcccEECCCcccC-CccCCCCCCCCCCCCCCcEEeCCeeECCCCC
Confidence 4577788884 5789998 99 699999864 236764 49998 99999999999999
Q ss_pred ccCCCCCCc
Q 008406 302 YGVDCSIPS 310 (567)
Q Consensus 302 ~G~~C~~~~ 310 (567)
+|.+|+.+.
T Consensus 208 ~G~~C~~~~ 216 (217)
T 2p28_B 208 EGSACQHHH 216 (217)
T ss_dssp ESTTSCEEC
T ss_pred ccCCcCCCC
Confidence 999998754
No 11
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.26 E-value=6.5e-12 Score=112.76 Aligned_cols=107 Identities=26% Similarity=0.668 Sum_probs=73.5
Q ss_pred CCCC---CCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCCeEecCCCcc
Q 008406 121 KSCK---SDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTK 195 (567)
Q Consensus 121 ~~C~---~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~ 195 (567)
++|. ++|.++|+|+...| +|.|++||+|..|+.. ..+|.
T Consensus 6 deC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~-~~~C~----------------------------------- 49 (135)
T 2vj3_A 6 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID-VNECV----------------------------------- 49 (135)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEE-CCTTT-----------------------------------
T ss_pred ccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccccc-CccCC-----------------------------------
Confidence 6773 57999999987666 8999999999999853 12222
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccc
Q 008406 196 YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (567)
Q Consensus 196 G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~ 275 (567)
..+|.++|.|....+ .++|.|+ +||+|..|+..
T Consensus 50 -------------------------------------~~~C~~~~~C~~~~g---------~~~C~C~-~G~~G~~C~~~ 82 (135)
T 2vj3_A 50 -------------------------------------SNPCQNDATCLDQIG---------EFQCICM-PGYEGVHCEVN 82 (135)
T ss_dssp -------------------------------------TCCCCSSCEEEECSS---------CEEEECC-TTEESSSSCEE
T ss_pred -------------------------------------CCCCCCCCEEeCCCC---------CceeeCC-CCCcCCcceec
Confidence 112444566654321 4678887 88888888755
Q ss_pred cCCccCCCCCCCeeee----CCeeecCCCcccCCCCCCc
Q 008406 276 VSSTCVNQCSGHGHCR----GGFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 276 ~~~~C~~~Cs~~G~C~----~G~C~C~~G~~G~~C~~~~ 310 (567)
++..-.++|.++|+|+ ...|.|++||+|..|++.+
T Consensus 83 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 83 TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDL 121 (135)
T ss_dssp CCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred CCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccC
Confidence 3332246788888886 3478888888888887543
No 12
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.21 E-value=2.6e-11 Score=109.65 Aligned_cols=125 Identities=23% Similarity=0.558 Sum_probs=80.3
Q ss_pred CC-CCCCCCCCEEecCC----CeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCCeEecCCCccc
Q 008406 122 SC-KSDCSGQGVCNHEL----GQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKY 196 (567)
Q Consensus 122 ~C-~~~Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G 196 (567)
+| +++|.++|+|+... .+|.|++||+|..|+... .|... .
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~--~~~~~---------------------------------~ 46 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVV--EVASD---------------------------------E 46 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCC--CCTTT---------------------------------T
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCc--ccccc---------------------------------c
Confidence 56 67899999998643 379999999999998741 11100 0
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCccccccc
Q 008406 197 PNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV 276 (567)
Q Consensus 197 ~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~ 276 (567)
..|...+.| ...+|.++|.|..... +.......++|.|+ +||+|..|+..+
T Consensus 47 ~~c~~~~~C--------------------------~~~~C~~~g~C~~~~~--~~~~~~~~~~C~C~-~G~~G~~C~~~i 97 (143)
T 4d90_A 47 EEPTSAGPC--------------------------TPNPCHNGGTCEISEA--YRGDTFIGYVCKCP-RGFNGIHCQHNI 97 (143)
T ss_dssp TSCCCCCTT--------------------------SSCCCCTTCEEEECCC--EETTEECCEEEECC-TTEESTTSCEEC
T ss_pred cccccCCcC--------------------------CCCCCCCCCEecCCCc--cccCCCCCeEeECc-CCCcCCCcccCC
Confidence 000000111 1345778888863211 00000125799999 999999998654
Q ss_pred CCccCCCCCCCeeee--C--CeeecCCCcccCCCCCCc
Q 008406 277 SSTCVNQCSGHGHCR--G--GFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 277 ~~~C~~~Cs~~G~C~--~--G~C~C~~G~~G~~C~~~~ 310 (567)
+..-.++|.++|+|+ . .+|.|++||+|.+|+...
T Consensus 98 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 98 NECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp CTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC-
T ss_pred CcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceecC
Confidence 433357899999997 2 389999999999998765
No 13
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.19 E-value=3.1e-12 Score=121.23 Aligned_cols=141 Identities=21% Similarity=0.429 Sum_probs=99.2
Q ss_pred CCCCCCCCEEecCCC--eEEeCCCCcCC---CCCccccccCCCCCCCCCCCCCcccccCC--CcccCCC-----C--eEe
Q 008406 124 KSDCSGQGVCNHELG--QCRCFHGFRGK---GCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTR-----A--MCF 189 (567)
Q Consensus 124 ~~~Cs~~G~C~~~~G--~C~C~~G~~G~---~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~-----g--~C~ 189 (567)
+++|. +|+|+...| +|.|++||+|. .|+. ..+|..... ...|. +.|.... + .|.
T Consensus 10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~--id~C~~~~~---------~~~C~~~~~C~~~~~~~~~g~y~C~ 77 (186)
T 1z1y_A 10 DTICX-NGQLVQMSNHFXCMCNEGLVHLSENTCEE--XNECXXETL---------GXACGEFGQCIENPDPAQVNMYXCG 77 (186)
T ss_dssp TCCCB-TEEEEECSSCEEEEECTTEEEEETTEEEE--CCCCSGGGT---------TSEEETTEEEEECSSTTSSCSEEEE
T ss_pred CCCCC-CCEeECCCCCeEeECCCCCccCCCCccCC--CCcccCCCC---------CCCCCCCCEeecCCCCcCCCCEECC
Confidence 56787 569987555 79999999998 7764 356652100 12464 5676655 3 899
Q ss_pred cCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccC----CCcccccccccccccccccCCC
Q 008406 190 CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCN----VDPEEAYALKVQFKEECDCKYD 265 (567)
Q Consensus 190 C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~----~~~~~~~~~g~c~~g~C~C~~~ 265 (567)
|++||.|..+ .|. . ..| ...+|.++|.|. ...+ .++|.|+ +
T Consensus 78 C~~G~~g~~~----~C~--~----------------d~C---~~~~C~~~g~C~~~~~~~~g---------~~~C~C~-~ 122 (186)
T 1z1y_A 78 CIEGYTLXED----TCV--L----------------DVC---QYXNCGESGECIVEYLSEIQ---------SAGCSCA-I 122 (186)
T ss_dssp ECTTEEEETT----EEE--E----------------GGG---TTCCCCTTEEEEEEEETTEE---------EEEEEEC-T
T ss_pred CCCCCccCCC----CCC--C----------------CcC---cCCCCCCCCEEeeCCcCCCC---------CceEECC-C
Confidence 9999998754 121 0 011 134578889996 3321 5799999 9
Q ss_pred CCCC-----cccccccCCccCCCC-CCCeeee--C--CeeecCCCcccCCCCCCcc
Q 008406 266 GLLG-----QFCEVPVSSTCVNQC-SGHGHCR--G--GFCQCDSGWYGVDCSIPSV 311 (567)
Q Consensus 266 G~~G-----~~Ce~~~~~~C~~~C-s~~G~C~--~--G~C~C~~G~~G~~C~~~~~ 311 (567)
||+| ..|+......|.++| .++|+|+ . .+|.|.+||+|..|+....
T Consensus 123 Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 123 GXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp EEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETTTTEEE
T ss_pred CCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCccCcccccCC
Confidence 9998 889864345788899 8999997 2 3899999999999987653
No 14
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.06 E-value=8.5e-11 Score=109.62 Aligned_cols=116 Identities=24% Similarity=0.485 Sum_probs=82.8
Q ss_pred eecCCCCCccccccCccCCCCCCCCCC-CCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCC-C
Q 008406 102 LSGCDSVAKEVDLVEMIGGKSCKSDCS-GQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP-T 179 (567)
Q Consensus 102 ~~~C~~g~~g~~~~~~~~~~~C~~~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-g 179 (567)
.+.|.+||.|..|.. ..|...|+ .+|.|+. .++|.|++||+|..|++....+ .|. +
T Consensus 51 ~C~C~~G~~G~~C~~----~~C~~~C~~~~g~C~~-~~~C~C~~G~~G~~C~~C~~~~-----------------~C~~g 108 (169)
T 2vj2_A 51 NKTCMEGWMGPECNR----AICRQGCSPKHGSCKL-PGDCRCQYGWQGLYCDKCIPHP-----------------GCVHG 108 (169)
T ss_dssp CEEECTTEESTTSCE----ECCCTTCCTTTEECSS-TTCCEECTTEESSSSCEECCCT-----------------TCSSE
T ss_pred eeECCCCCcCCCCCC----CCCCCCCCCCCcccCC-CCeeECCCCCCCCCcccCCCCC-----------------CCCCC
Confidence 357999999988864 35877898 7999985 7899999999999998632111 122 3
Q ss_pred cccCCCCeEecCCCcccCCCCC-CCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCccccccccccccc
Q 008406 180 HCDTTRAMCFCGEGTKYPNRPV-AEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKE 258 (567)
Q Consensus 180 ~C~~~~g~C~C~~G~~G~~C~~-~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g 258 (567)
.|. ..++|.|++||.|..|+. .+.| . ...+|.++|.|..... ..+
T Consensus 109 ~C~-~~~~C~C~~G~~G~~C~~~~~~C-----------------------~--~~~~C~~~g~C~~~~~--------~~~ 154 (169)
T 2vj2_A 109 ICN-EPWQCLCETNWGGQLCDKDLNYC-----------------------G--THQPCLNGGTCSNTGP--------DKY 154 (169)
T ss_dssp ECS-STTCCEECTTEETTTTCEESCHH-----------------------H--HTCCCCTTCEEEECST--------TCE
T ss_pred CcC-CCCEEeCCCCCCCCcccCCCCCC-----------------------C--CCCCCCCCCEEcCCCC--------CCc
Confidence 344 357999999999887742 1112 1 0246888899975311 157
Q ss_pred ccccCCCCCCCccccc
Q 008406 259 ECDCKYDGLLGQFCEV 274 (567)
Q Consensus 259 ~C~C~~~G~~G~~Ce~ 274 (567)
+|.|+ +||+|.+|++
T Consensus 155 ~C~C~-~G~~G~~Ce~ 169 (169)
T 2vj2_A 155 QCSCP-EGYSGPNCEI 169 (169)
T ss_dssp EEECC-TTCCSTTSCC
T ss_pred EeECC-CCCcCcCcCC
Confidence 99999 9999999973
No 15
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.93 E-value=4.2e-10 Score=104.15 Aligned_cols=114 Identities=21% Similarity=0.360 Sum_probs=69.7
Q ss_pred CCCCCCEEecCC----CeE-EeCCCCcCCCCCccccccCCCCCCCC--C---CCCCcccccCC--------CcccCCCCe
Q 008406 126 DCSGQGVCNHEL----GQC-RCFHGFRGKGCSERIHFQCNFPKTPE--L---PYGRWVVSICP--------THCDTTRAM 187 (567)
Q Consensus 126 ~Cs~~G~C~~~~----G~C-~C~~G~~G~~Ce~~~~~~C~~~~~~~--~---~~g~~~~~~C~--------g~C~~~~g~ 187 (567)
+|.++|+|+..+ ++| .|++||+|++||. |..+-... . ....+..-.|. +.|+..+|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-----C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~ 76 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-----CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGE 76 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-----ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-----CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCc
Confidence 489999998755 489 7999999999996 32210000 0 00112222333 368878899
Q ss_pred Ee-cCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCC-----ccCCCCCCCc------ccCCCcccccccccc
Q 008406 188 CF-CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDN-----IFTTNGSKPG------WCNVDPEEAYALKVQ 255 (567)
Q Consensus 188 C~-C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~-----~~~~~C~~~G------~C~~~~~~~~~~g~c 255 (567)
|+ |.++|.|.+|+. |.++|+|..+.. .....|.+.| .|+.
T Consensus 77 C~~C~~g~~G~~Ce~-----------------C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~----------- 128 (162)
T 1klo_A 77 CLKCIYNTAGFYCDR-----------------CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNP----------- 128 (162)
T ss_dssp BCCBCTTEETTTTCE-----------------ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCT-----------
T ss_pred ccCCCCCCcCCCcCc-----------------CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCC-----------
Confidence 96 999999988742 345666655431 1133455444 3432
Q ss_pred cccccccCCCCCCCcccc
Q 008406 256 FKEECDCKYDGLLGQFCE 273 (567)
Q Consensus 256 ~~g~C~C~~~G~~G~~Ce 273 (567)
++|+|.|+ +||+|..|+
T Consensus 129 ~tG~C~C~-~g~~G~~Cd 145 (162)
T 1klo_A 129 VTGQCQCL-PHVSGRDCG 145 (162)
T ss_dssp TTCCCCBC-TTEESTTCC
T ss_pred CCCEeECC-CCCcCCCCC
Confidence 25777777 777777765
No 16
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.89 E-value=5.9e-12 Score=124.33 Aligned_cols=166 Identities=9% Similarity=-0.136 Sum_probs=101.5
Q ss_pred cCCceeecCCCCCccccccCccCCCC------C-CCCCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCCCCC
Q 008406 97 EIGRWLSGCDSVAKEVDLVEMIGGKS------C-KSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPY 169 (567)
Q Consensus 97 ~~G~~~~~C~~g~~g~~~~~~~~~~~------C-~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~ 169 (567)
.++.|.+.|+.||.|..|+..+ .+ | +.+|.++|+| |.|..|+..+ +|.+
T Consensus 49 g~~~y~C~Cp~Gf~G~~Ce~ni--~ec~~~~~c~s~pC~nggtc------------~~G~~c~~~~--eC~s-------- 104 (267)
T 4fbr_A 49 GTMTYNGEGPIGFRGTLSSANN--YTVENQWGGTSAPWQPGGVW------------VLGARDKQNI--VAVS-------- 104 (267)
T ss_dssp EEEEETTSCCEEEEEEECSTTE--EEEEEESSSTTSCEEEEEEE------------ECCCCSSCCE--EEEE--------
T ss_pred CCCCeEEeCCCCcccccccccc--cccccccCcCCCcccCCCee------------eccCcccccc--ccCC--------
Confidence 3688888899999998887665 45 4 5566666665 3566777642 3332
Q ss_pred CCcccccCC--CcccCCC--CeEecCCCcccCCCCCCC-CCCCccCCCCCCCCCCC---CCCCCCCCCCc---cCCCCCC
Q 008406 170 GRWVVSICP--THCDTTR--AMCFCGEGTKYPNRPVAE-ACGFQVNLPSQPGAPKS---TDWAKADLDNI---FTTNGSK 238 (567)
Q Consensus 170 g~~~~~~C~--g~C~~~~--g~C~C~~G~~G~~C~~~~-~C~~~~~~~~c~~~~c~---~gw~g~~c~~~---~~~~C~~ 238 (567)
.+|. ++|.+.. .+|.|+.||+|.+|+... .|.. ...+...+|. ..+.|..|+.. .+.+|.+
T Consensus 105 -----~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n---~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~n 176 (267)
T 4fbr_A 105 -----IKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVEN---QWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSND 176 (267)
T ss_dssp -----EECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEE---ECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSS
T ss_pred -----CCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccc---cCCcCCccccCCcceecccccccccccCCCCCCC
Confidence 2343 5565543 378899999998886532 1211 1112222222 23345555532 2567888
Q ss_pred CcccCCCcccccccccccccccccCCCCCCCcccccccCC-----ccC------------------------CCCCCCee
Q 008406 239 PGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSS-----TCV------------------------NQCSGHGH 289 (567)
Q Consensus 239 ~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~-----~C~------------------------~~Cs~~G~ 289 (567)
+|.|..... .++|.|+ +||+|..|+..++. .|. .+|.++|+
T Consensus 177 gg~C~dg~~---------~y~C~Cp-~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGt 246 (267)
T 4fbr_A 177 GGKTLSGTM---------TYNGEGP-IGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGK 246 (267)
T ss_dssp TTSEEEEEE---------EETTSCC-EEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTS
T ss_pred CCEeeCCCC---------CeEEeCC-CCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCE
Confidence 888864322 6799999 99999999876532 011 14666777
Q ss_pred eeC----CeeecCCCcccC
Q 008406 290 CRG----GFCQCDSGWYGV 304 (567)
Q Consensus 290 C~~----G~C~C~~G~~G~ 304 (567)
|++ +.|.|++||+|.
T Consensus 247 C~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 247 TLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp EEEEEEEETTSCCEEEEEE
T ss_pred eeCCCcceeecCCCCcccc
Confidence 763 367788888774
No 17
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.82 E-value=7e-09 Score=113.74 Aligned_cols=102 Identities=18% Similarity=0.249 Sum_probs=42.3
Q ss_pred CCCeEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCc---cCCCCCCCcccCCCccccccccccccccc
Q 008406 184 TRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNI---FTTNGSKPGWCNVDPEEAYALKVQFKEEC 260 (567)
Q Consensus 184 ~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~---~~~~C~~~G~C~~~~~~~~~~g~c~~g~C 260 (567)
..+.|.|.+++.|..|.. |..||+|..|+.. ...+|.+.|.|...... ...+|+|
T Consensus 405 ~~~~C~C~~g~~G~~C~~-----------------C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~C-----d~~tg~C 462 (525)
T 4aqs_A 405 IAGQCRCKLHVEGERCDV-----------------CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPC-----DSETGYC 462 (525)
T ss_dssp CSSCCCBCTTEETTTTCE-----------------ECTTEECCCTTSTTSSEECCCCTTTBCCSSCCB-----CTTTCCB
T ss_pred CCCccCCCCCCCCCcccC-----------------CCCCCcCCCCCCCCCCccCCCCCCceecCCCcc-----cCCCCEE
Confidence 346788888888776631 3456666555422 24456666666432100 0036799
Q ss_pred ccCCCCCCCccccccc---------CCccC-CCCCCCeee----e--CCeeecCCCcccCCCCC
Q 008406 261 DCKYDGLLGQFCEVPV---------SSTCV-NQCSGHGHC----R--GGFCQCDSGWYGVDCSI 308 (567)
Q Consensus 261 ~C~~~G~~G~~Ce~~~---------~~~C~-~~Cs~~G~C----~--~G~C~C~~G~~G~~C~~ 308 (567)
.|+ +||+|..|+... ...|. .+|.++|.| . +|+|.|++||+|.+|++
T Consensus 463 ~C~-~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 463 YCK-RLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp CBC-TTCCSTTTCC--------------------------------------------------
T ss_pred ECC-CCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 999 999999997421 12232 457766654 3 57899999999999974
No 18
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.78 E-value=1.3e-08 Score=91.15 Aligned_cols=87 Identities=21% Similarity=0.481 Sum_probs=69.0
Q ss_pred CCceeecCCCCCccccccCccCCCCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCccc
Q 008406 98 IGRWLSGCDSVAKEVDLVEMIGGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVV 174 (567)
Q Consensus 98 ~G~~~~~C~~g~~g~~~~~~~~~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~ 174 (567)
.|.|.+.|.+||.|..|...+ ++| .++|.++|+|....| +|.|++||+|..|+.. ..+|...
T Consensus 25 ~g~~~C~C~~Gy~G~~C~~~~--~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~-~~~C~~~------------ 89 (135)
T 2vj3_A 25 LGSFECQCLQGYTGPRCEIDV--NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN-TDECASS------------ 89 (135)
T ss_dssp SSSEEEECCTTEESTTSCEEC--CTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE-CCTTTTC------------
T ss_pred CCCEEEECCCCCcCCcccccC--ccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec-CCcccCC------------
Confidence 478999999999999887554 788 678999999987655 8999999999999863 3456532
Q ss_pred ccCC--CcccCCCC--eEecCCCcccCCCC
Q 008406 175 SICP--THCDTTRA--MCFCGEGTKYPNRP 200 (567)
Q Consensus 175 ~~C~--g~C~~~~g--~C~C~~G~~G~~C~ 200 (567)
.|. +.|....+ .|.|++||+|..|+
T Consensus 90 -~C~~~g~C~~~~g~~~C~C~~G~~G~~C~ 118 (135)
T 2vj3_A 90 -PCLHNGRCLDKINEFQCECPTGFTGHLCQ 118 (135)
T ss_dssp -CSTTTCEEEECSSCEEEECCTTEESSSSC
T ss_pred -CcCCCCEeECCCCCeEEECCCCCcCCccC
Confidence 354 56766554 89999999988774
No 19
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.78 E-value=6.8e-10 Score=105.00 Aligned_cols=132 Identities=15% Similarity=0.296 Sum_probs=88.1
Q ss_pred cCCceeecCCCCCccc---cccCccCCCCCC-----CCCCCCCEEecCC-----C--eEEeCCCCcCCCCCccccccCCC
Q 008406 97 EIGRWLSGCDSVAKEV---DLVEMIGGKSCK-----SDCSGQGVCNHEL-----G--QCRCFHGFRGKGCSERIHFQCNF 161 (567)
Q Consensus 97 ~~G~~~~~C~~g~~g~---~~~~~~~~~~C~-----~~Cs~~G~C~~~~-----G--~C~C~~G~~G~~Ce~~~~~~C~~ 161 (567)
..|.|.+.|.+||.|. .|.+ .++|. .+|.++|+|.... | +|.|++||+|..|+.. ..+|..
T Consensus 21 ~~g~~~C~C~~G~~g~~~~~C~~---id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~-~d~C~~ 96 (186)
T 1z1y_A 21 MSNHFXCMCNEGLVHLSENTCEE---XNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCV-LDVCQY 96 (186)
T ss_dssp CSSCEEEEECTTEEEEETTEEEE---CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEE-EGGGTT
T ss_pred CCCCeEeECCCCCccCCCCccCC---CCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCC-CCcCcC
Confidence 3588999999999987 6652 27884 4599999998765 3 7999999999976543 356654
Q ss_pred CCCCCCCCCCcccccCC--Cccc----CCCC--eEecCCCcccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccC
Q 008406 162 PKTPELPYGRWVVSICP--THCD----TTRA--MCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFT 233 (567)
Q Consensus 162 ~~~~~~~~g~~~~~~C~--g~C~----~~~g--~C~C~~G~~G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~ 233 (567)
. .|. +.|. ...+ .|.|++||.|..+. +..|.... . ..| .
T Consensus 97 ~-------------~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~-~~~C~~~~-~--------------~~C----~ 143 (186)
T 1z1y_A 97 X-------------NCGESGECIVEYLSEIQSAGCSCAIGXVPNPED-EXXCTXTG-E--------------TAC----Q 143 (186)
T ss_dssp C-------------CCCTTEEEEEEEETTEEEEEEEECTEEEEETTT-TTEEEEEE-C--------------CCC----C
T ss_pred C-------------CCCCCCEEeeCCcCCCCCceEECCCCCcccCCC-CCcceEcC-C--------------Ccc----c
Confidence 2 354 5565 4443 89999999983211 11221000 0 001 1
Q ss_pred CCC-CCCcccCCCcccccccccccccccccCCCCCCCcccccc
Q 008406 234 TNG-SKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (567)
Q Consensus 234 ~~C-~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~ 275 (567)
.+| .+++.|....+ .++|.|+ +||+|..|+..
T Consensus 144 ~~C~~~~~~C~n~~g---------~y~C~C~-~G~~g~~~~~~ 176 (186)
T 1z1y_A 144 LXCNTDNEVCXNVEG---------VYXCQCM-EGFTFDXEXNV 176 (186)
T ss_dssp CCCCTTTEEEEEETT---------EEEEEEC-TTCEEETTTTE
T ss_pred ccccccCcceecCCC---------CeeeECC-CCCccCccccc
Confidence 257 67788865432 5689999 99999998764
No 20
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.73 E-value=1.8e-08 Score=90.80 Aligned_cols=89 Identities=21% Similarity=0.487 Sum_probs=66.0
Q ss_pred CceeecCCCCCccccccCcc----------CCCCC-CCCCCCCCEEecC---------CCeEEeCCCCcCCCCCcccccc
Q 008406 99 GRWLSGCDSVAKEVDLVEMI----------GGKSC-KSDCSGQGVCNHE---------LGQCRCFHGFRGKGCSERIHFQ 158 (567)
Q Consensus 99 G~~~~~C~~g~~g~~~~~~~----------~~~~C-~~~Cs~~G~C~~~---------~G~C~C~~G~~G~~Ce~~~~~~ 158 (567)
|.|.+.|.+||.|..|.... ..++| +++|.++|+|... ...|.|++||+|..|+.. ..+
T Consensus 21 g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~-i~~ 99 (143)
T 4d90_A 21 GSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHN-INE 99 (143)
T ss_dssp -CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEE-CCT
T ss_pred CCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccC-CCc
Confidence 67888999999999887521 23678 6679999999732 228999999999999853 355
Q ss_pred CCCCCCCCCCCCCcccccCC--CcccCCCC--eEecCCCcccCCCCC
Q 008406 159 CNFPKTPELPYGRWVVSICP--THCDTTRA--MCFCGEGTKYPNRPV 201 (567)
Q Consensus 159 C~~~~~~~~~~g~~~~~~C~--g~C~~~~g--~C~C~~G~~G~~C~~ 201 (567)
|... .|. +.|....+ .|.|++||+|.+|..
T Consensus 100 C~~~-------------~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 100 CEVE-------------PCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp TTTC-------------CSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCCC-------------CCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 6532 343 56776655 899999999988743
No 21
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.65 E-value=4.3e-11 Score=118.16 Aligned_cols=137 Identities=9% Similarity=-0.037 Sum_probs=80.2
Q ss_pred CCCCCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCCeEecCCCcccCC
Q 008406 121 KSCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPN 198 (567)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~ 198 (567)
..+...|.++|+|....+ +|.|++||+|..|++.+ .+|..... +...+|. . .++| +.|.+
T Consensus 34 ~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni-~ec~~~~~-------c~s~pC~----n-ggtc-----~~G~~ 95 (267)
T 4fbr_A 34 VALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANN-YTVENQWG-------GTSAPWQ----P-GGVW-----VLGAR 95 (267)
T ss_dssp EEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTE-EEEEEESS-------STTSCEE----E-EEEE-----ECCCC
T ss_pred ccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccc-cccccccC-------cCCCccc----C-CCee-----eccCc
Confidence 344457999999985443 79999999999999753 33221100 0001221 1 1122 23444
Q ss_pred CCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccC-
Q 008406 199 RPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS- 277 (567)
Q Consensus 199 C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~- 277 (567)
|.....| .+.+|.+.|.|..... .++|.|+ +||+|.+|+..+.
T Consensus 96 c~~~~eC--------------------------~s~pC~ngG~C~~~~~---------sy~C~C~-~Gf~G~~Ce~~~d~ 139 (267)
T 4fbr_A 96 DKQNIVA--------------------------VSIKSNDGGKTLTGTT---------TYNGEGP-IGFKSEVTDGDTYS 139 (267)
T ss_dssp SSCCEEE--------------------------EEEECSSTTSEEEEEE---------EETTSCC-EEEEEEECCCCEEE
T ss_pred ccccccc--------------------------CCCCCCCCCEEecCCc---------cEEeeCC-CCccccCCCCCccc
Confidence 4322211 1345666666653221 4566676 6776666665431
Q ss_pred ----------------------------CccCCCCCCCeeeeC----CeeecCCCcccCCCCCCcc
Q 008406 278 ----------------------------STCVNQCSGHGHCRG----GFCQCDSGWYGVDCSIPSV 311 (567)
Q Consensus 278 ----------------------------~~C~~~Cs~~G~C~~----G~C~C~~G~~G~~C~~~~~ 311 (567)
..+.++|.++|+|++ ++|.|++||+|..|+.-..
T Consensus 140 C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~ 205 (267)
T 4fbr_A 140 VENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTY 205 (267)
T ss_dssp EEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEE
T ss_pred ccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccccccccccc
Confidence 122346888899974 4799999999999987543
No 22
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.58 E-value=4e-08 Score=88.67 Aligned_cols=29 Identities=28% Similarity=0.717 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCEEecCCCeEEeCCCCcCCC
Q 008406 121 KSCKSDCSGQGVCNHELGQCRCFHGFRGKG 150 (567)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~ 150 (567)
..|+..|.++|+|+. ..+|.|++||+|..
T Consensus 3 ~~C~~~C~~~~~C~~-~~~C~C~~G~~g~~ 31 (143)
T 2bou_A 3 RGCARWCPQDSSCVN-ATACRCNPGFSSFS 31 (143)
T ss_dssp CCCCTTCCTTEEESS-SSCEEECTTEECSS
T ss_pred CCCcCcCCCCCEEcC-CCEEeCCCCCcCcc
Confidence 357888999999985 47999999999963
No 23
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.42 E-value=8e-08 Score=92.76 Aligned_cols=64 Identities=25% Similarity=0.459 Sum_probs=46.3
Q ss_pred CCCCCCCCEEecCCCeEEeCCC------CcCCCCCccccccCCCCCCCCCCCCCcccccCCCc--ccCCCCeEecCCCcc
Q 008406 124 KSDCSGQGVCNHELGQCRCFHG------FRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTH--CDTTRAMCFCGEGTK 195 (567)
Q Consensus 124 ~~~Cs~~G~C~~~~G~C~C~~G------~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~--C~~~~g~C~C~~G~~ 195 (567)
...|+++|+|+ .|+|.|.+| |+|.+|+.. ...|.... +..|.++ ..+..+.|.|.+||+
T Consensus 142 ~~~Csg~G~C~--~g~C~C~~gw~~~~~~~G~~Ce~~-~~~C~~~~----------g~~C~~~~~G~C~~g~C~C~~G~~ 208 (217)
T 2p28_B 142 SIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECD-TINCERYN----------GQVCGGPGRGLCFCGKCRCHPGFE 208 (217)
T ss_dssp SCBGGGTEEEE--TTEEEECCCCSTTCCEESTTSCEE-SSCSCEET----------TEETTCTTTEEEETTEEEECTTEE
T ss_pred CCCCCCCCEEe--CCceECCCCCCCcccEECCCcccC-CccCCCCC----------CCCCCCCCCcEEeCCeeECCCCCc
Confidence 35699999999 799999999 699999963 23454321 1246543 333358999999999
Q ss_pred cCCCC
Q 008406 196 YPNRP 200 (567)
Q Consensus 196 G~~C~ 200 (567)
|..|+
T Consensus 209 G~~C~ 213 (217)
T 2p28_B 209 GSACQ 213 (217)
T ss_dssp STTSC
T ss_pred cCCcC
Confidence 88774
No 24
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.38 E-value=5.5e-08 Score=104.79 Aligned_cols=75 Identities=24% Similarity=0.583 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCc-cCCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccCCCCCCCeeee-CCeee
Q 008406 219 KSTDWAKADLDNI-FTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-GGFCQ 296 (567)
Q Consensus 219 c~~gw~g~~c~~~-~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~-~G~C~ 296 (567)
|..+|++..|+.. +..+|.+ |.|.. .++|.|. +||+|..|+.. .|.++|+++|+|+ .+.|.
T Consensus 381 C~~~~~g~~c~~~~C~~~C~n-G~C~~------------~~~C~C~-~G~~G~~C~~~---~C~~~C~~~g~C~~~~~C~ 443 (463)
T 2wg3_C 381 CRATVQPAQTLTSECSRLCRN-GYCTP------------TGKCCCS-PGWEGDFCRTA---KCEPACRHGGVCVRPNKCL 443 (463)
T ss_dssp GCCCCCCCCCCCCHHHHHCCS-EEECT------------TSCEEEC-TTEESTTSCEE---CC-----------------
T ss_pred CCCCCcCCCCccccccCCCCC-CccCC------------CCeECCC-CCcCCCcCCcC---cCCCCCCCCCEECCCCEEE
Confidence 5567777766521 1224665 77753 4689999 99999999865 6888999999998 58999
Q ss_pred cCCCcccCCCCCCc
Q 008406 297 CDSGWYGVDCSIPS 310 (567)
Q Consensus 297 C~~G~~G~~C~~~~ 310 (567)
|.+||+|..|++..
T Consensus 444 C~~G~~G~~C~~~~ 457 (463)
T 2wg3_C 444 CKKGYLGPQCEQVD 457 (463)
T ss_dssp --------------
T ss_pred CCCCcccCCCCCCc
Confidence 99999999999864
No 25
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.36 E-value=3.8e-07 Score=100.83 Aligned_cols=117 Identities=23% Similarity=0.463 Sum_probs=76.1
Q ss_pred CCC-CCCCCCCCEEecCC-C--eE-EeCCCCcC--CCCCccccccCCCCCCCCCCCCCcccccCC--C---cccCCCC--
Q 008406 121 KSC-KSDCSGQGVCNHEL-G--QC-RCFHGFRG--KGCSERIHFQCNFPKTPELPYGRWVVSICP--T---HCDTTRA-- 186 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~-G--~C-~C~~G~~G--~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g---~C~~~~g-- 186 (567)
++| +++|.++|+|.... | +| .|++||+| ..|+. ..+|.... ..|. + .|....+
T Consensus 4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeD--iDEC~~~p-----------~~C~~gg~~~~CvNt~gsY 70 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCED--LDECALVP-----------DICFSTSKVPRCVNTQPGF 70 (634)
T ss_dssp CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCB--CCTTTTSC-----------CCSCCCSSSCCEEECSSSE
T ss_pred cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccc--cccccCCC-----------CcccCCccccceeeccCce
Confidence 677 67899999997654 3 79 99999999 78974 46776432 1254 3 5766554
Q ss_pred eEe-cCCCcccCCCCC---------CCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCccccccccccc
Q 008406 187 MCF-CGEGTKYPNRPV---------AEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQF 256 (567)
Q Consensus 187 ~C~-C~~G~~G~~C~~---------~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~ 256 (567)
+|. |++||.|..|.. ...|.. -..|. ....+|.+++.|...... ...
T Consensus 71 ~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d-----------------ideC~-~~~~pC~~~~~Cvnt~~~-----~~G 127 (634)
T 1yo8_A 71 HCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP-----------------ENPCK-DKTHNCHKHAECIYLGHF-----SDP 127 (634)
T ss_dssp EECCCCTTEEECCCEESSSHHHHSCCCCEEE-----------------CCTTT-TTCCCCCTTEEEEECCTT-----CSS
T ss_pred ecccCCCCcccCccccccccccccCCCcccc-----------------ccccc-CCCcccccCccccccccc-----ccc
Confidence 898 999999987641 111210 00111 012468888889754300 001
Q ss_pred ccccccCCCCCCC--ccccc
Q 008406 257 KEECDCKYDGLLG--QFCEV 274 (567)
Q Consensus 257 ~g~C~C~~~G~~G--~~Ce~ 274 (567)
.++|.|+ +||+| ..|+.
T Consensus 128 sY~C~C~-~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 128 MYKCECQ-TGYAGDGLICGE 146 (634)
T ss_dssp SEEEEEC-TTEEESSSSEEE
T ss_pred ceeeecc-CCccccCccccc
Confidence 5799999 99997 89975
No 26
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.25 E-value=4.6e-07 Score=83.56 Aligned_cols=98 Identities=20% Similarity=0.370 Sum_probs=64.2
Q ss_pred CCceeecCCCCCccccccCccCCCCC-CCCCCCC------CEEecCCCeEE-eCCCCcCCCCCccccccCCCCCCCC---
Q 008406 98 IGRWLSGCDSVAKEVDLVEMIGGKSC-KSDCSGQ------GVCNHELGQCR-CFHGFRGKGCSERIHFQCNFPKTPE--- 166 (567)
Q Consensus 98 ~G~~~~~C~~g~~g~~~~~~~~~~~C-~~~Cs~~------G~C~~~~G~C~-C~~G~~G~~Ce~~~~~~C~~~~~~~--- 166 (567)
.|..+..|.+++.+..+...-....| +-.|+++ ++|+..+|+|. |.+||+|..|+. |..+-...
T Consensus 28 ~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~-----C~~Gy~g~~~~ 102 (162)
T 1klo_A 28 AGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR-----CKEGFFGNPLA 102 (162)
T ss_dssp ESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE-----ECTTEEECTTC
T ss_pred cCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc-----CchhhcCCccc
Confidence 46777778888877665432122355 4567776 68998899995 999999999986 33210000
Q ss_pred -CCCCCcccccCC--------CcccCCCCeEecCCCcccCCCC
Q 008406 167 -LPYGRWVVSICP--------THCDTTRAMCFCGEGTKYPNRP 200 (567)
Q Consensus 167 -~~~g~~~~~~C~--------g~C~~~~g~C~C~~G~~G~~C~ 200 (567)
.....+..-.|. +.|+..+|+|.|.+||.|.+|+
T Consensus 103 ~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 103 PNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG 145 (162)
T ss_dssp SSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred cCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence 001122222343 2788889999999999998874
No 27
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.24 E-value=5.7e-07 Score=74.67 Aligned_cols=50 Identities=38% Similarity=0.886 Sum_probs=40.0
Q ss_pred ccccccCCCCCCCcccc-cccCCcc-CCCCCCCeeeeC------CeeecCCCcccCCCCCCc
Q 008406 257 KEECDCKYDGLLGQFCE-VPVSSTC-VNQCSGHGHCRG------GFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 257 ~g~C~C~~~G~~G~~Ce-~~~~~~C-~~~Cs~~G~C~~------G~C~C~~G~~G~~C~~~~ 310 (567)
.++|.|+ +||+ .|+ ..++ .| +++|.++|+|++ ..|.|++||+|..|++.+
T Consensus 31 ~y~C~C~-~G~~--~C~~~~~~-~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 31 VEYCWCN-SGRA--QCHSVPVK-SCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp EEEEECS-SSCC--BCCEECEE-ECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred CcEeECC-CCCc--ccccCcCC-cccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence 5789999 9998 897 3333 45 478999999972 379999999999998653
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.15 E-value=1e-06 Score=73.11 Aligned_cols=85 Identities=18% Similarity=0.318 Sum_probs=54.5
Q ss_pred eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCCeEecCCCcccCCCC--CCCCCCCccCCCCCCC
Q 008406 139 QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRP--VAEACGFQVNLPSQPG 216 (567)
Q Consensus 139 ~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~C~--~~~~C~~~~~~~~c~~ 216 (567)
.|.|.+||+|..|+.. +|.. ..|... .....|.|++||. .|+ ..+.|
T Consensus 3 ~C~C~~g~~g~~c~~~---~c~~-------------~pC~n~--~~~y~C~C~~G~~--~C~~~~~~~C----------- 51 (91)
T 1tpg_A 3 QVICRDEKTQMIYQQH---QSWL-------------RPVLRS--NRVEYCWCNSGRA--QCHSVPVKSC----------- 51 (91)
T ss_dssp CCCCBCSSSCCBCCSS---CEEE-------------EECSSS--SCEEEEECSSSCC--BCCEECEEEC-----------
T ss_pred eeECCCCCcCCeECCC---cccC-------------CccccC--CCCcEeECCCCCc--ccccCcCCcc-----------
Confidence 6899999999999753 3321 122110 1123899999997 453 11111
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccC
Q 008406 217 APKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS 277 (567)
Q Consensus 217 ~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~ 277 (567)
...+|.++|.|...... ..++|.|+ +||+|.+|++.++
T Consensus 52 ---------------~~~pC~ngg~C~~~~~~-------~~~~C~C~-~G~~G~~Ce~~id 89 (91)
T 1tpg_A 52 ---------------SEPRCFNGGTCQQALYF-------SDFVCQCP-EGFAGKSCEIDTR 89 (91)
T ss_dssp ---------------SSCCSCTTCEEEEESSS-------SCEEEECC-TTCBSSSCCBCSS
T ss_pred ---------------cCCCCCCCCEeecCCCC-------CCeEeECC-CCCcCCcCCcCCC
Confidence 14568889999753200 15789999 9999999997643
No 29
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.14 E-value=7.8e-07 Score=97.42 Aligned_cols=101 Identities=18% Similarity=0.332 Sum_probs=34.8
Q ss_pred eE-EeCCCCcCCCCCccc-cccCCCCCCCCCCCCCcccccCC--CcccCCCCeEecCCCcccCCCCCCCCCCCccCCCCC
Q 008406 139 QC-RCFHGFRGKGCSERI-HFQCNFPKTPELPYGRWVVSICP--THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQ 214 (567)
Q Consensus 139 ~C-~C~~G~~G~~Ce~~~-~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~g~C~C~~G~~G~~C~~~~~C~~~~~~~~c 214 (567)
.| .|.+||.|..|+... +.+|.-.. . ..|. +.|+...|+|.|++||.|.+|+.
T Consensus 419 ~C~~C~~Gy~G~~c~~~~~C~~C~C~~-----~-----gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~------------- 475 (525)
T 4aqs_A 419 RCDVCKEGFYDLSAEDPYGCKSCACNP-----L-----GTIPGGNPCDSETGYCYCKRLVTGQRCDQ------------- 475 (525)
T ss_dssp TTCEECTTEECCCTTSTTSSEECCCCT-----T-----TBCCSSCCBCTTTCCBCBCTTCCSTTTCC-------------
T ss_pred cccCCCCCCcCCCCCCCCCCccCCCCC-----C-----ceecCCCcccCCCCEEECCCCCcCCCccc-------------
Confidence 45 699999999987542 22222110 1 1232 56777889999999999988742
Q ss_pred CCCCCCCCCCCCCC--CCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCccccc
Q 008406 215 PGAPKSTDWAKADL--DNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEV 274 (567)
Q Consensus 215 ~~~~c~~gw~g~~c--~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~ 274 (567)
|.+|+++... +.+...+|.+.|.|...+.. .+|+|.|+ +||+|..||+
T Consensus 476 ----C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~-------~tG~C~C~-~G~~G~~Ceq 525 (525)
T 4aqs_A 476 ----CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSE-------DSGQCSCL-PHMIGRQCNE 525 (525)
T ss_dssp --------------------------------------------------------------
T ss_pred ----CCCCccCCCCCCCCCcCCCCCCCCccCCccCC-------CCCeeECC-CCCcCCCCCC
Confidence 2234444221 12224567777766543221 36799999 9999999974
No 30
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.10 E-value=1.8e-06 Score=90.60 Aligned_cols=47 Identities=23% Similarity=0.512 Sum_probs=0.0
Q ss_pred CCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccCCCCCCCeeee--CCeeecCC
Q 008406 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR--GGFCQCDS 299 (567)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~--~G~C~C~~ 299 (567)
..+|.++|.|... .+|.|+ +||+|..|+.. .|.++|+|+ .|+|.=+.
T Consensus 370 t~~C~ngg~C~~~------------~~C~C~-~G~~G~~Ce~c-------~C~~~g~C~~~~Gqc~~~~ 418 (426)
T 3zyj_B 370 LLHCQNGGTCHNN------------VRCLCP-AAYTGILCEKL-------RCEEAGSCGSDSGQGAPPH 418 (426)
T ss_dssp ---------------------------------------------------------------------
T ss_pred cccCCCCCCcCCC------------CCCcCC-CCCcCCCCcCC-------CCCCCCcccCCCCccCCCC
Confidence 3468888888642 289999 99999999853 477788886 56665433
No 31
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.07 E-value=3.8e-06 Score=72.59 Aligned_cols=67 Identities=28% Similarity=0.789 Sum_probs=48.5
Q ss_pred CCCCCCCCCCCEEecCCC--eEEeCCCCcCCCCCccc-cccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCCcc
Q 008406 121 KSCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERI-HFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (567)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~-~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~~ 195 (567)
.+|...|.++|+|....| +|.|++||+|..|+..+ ..+|.... ..|...|....| .|.|.+||.
T Consensus 16 ~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~-----------~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 16 HPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDN-----------GGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp CSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGG-----------GGCSSEEEECSSSEEEECCTTEE
T ss_pred ccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCC-----------CCCCCEeECCCCCEEeECCCCee
Confidence 456566999999976554 89999999999998743 23565311 235567777655 899999999
Q ss_pred cCC
Q 008406 196 YPN 198 (567)
Q Consensus 196 G~~ 198 (567)
|..
T Consensus 85 ~~~ 87 (114)
T 1aut_L 85 LGD 87 (114)
T ss_dssp ECT
T ss_pred ECC
Confidence 643
No 32
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.01 E-value=7.7e-07 Score=81.91 Aligned_cols=127 Identities=24% Similarity=0.514 Sum_probs=73.8
Q ss_pred CCC--CCCCCCCCEEecCCC--eEEeCCCCc----CCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCC------C
Q 008406 121 KSC--KSDCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTR------A 186 (567)
Q Consensus 121 ~~C--~~~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~------g 186 (567)
++| +++|. +|+|....| +|.|++||+ |..|+.....+|.....+. .....+.|.... .
T Consensus 4 deC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c-------~~~~~~~C~~~~~~~~~~~ 75 (162)
T 1uzk_A 4 NECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPR-------GDNGDTACSNEIGVGVSKA 75 (162)
T ss_dssp CGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC-----------------CEEEEEEEECHH
T ss_pred ccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCccc-------CCCCCCcccCCcCCcccCc
Confidence 677 36796 799987666 899999998 8888743222354311000 000124454432 3
Q ss_pred eEecCCCcc-cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCC
Q 008406 187 MCFCGEGTK-YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYD 265 (567)
Q Consensus 187 ~C~C~~G~~-G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~ 265 (567)
.|.|++||. |..|. .|..... ..++|.|+ +
T Consensus 76 ~C~C~~G~~~~~~C~----------------------------------------~C~~~~~--------~~y~C~C~-~ 106 (162)
T 1uzk_A 76 SCCCSLGKAWGTPCE----------------------------------------MCPAVNT--------SEYKILCP-G 106 (162)
T ss_dssp HHHTTTCCEETTTTE----------------------------------------ECCCTTS--------HHHHHHCT-T
T ss_pred eeeCCCCCCcCCCcc----------------------------------------cCCCCCC--------CCceeECC-C
Confidence 688888886 32221 1211100 15689997 7
Q ss_pred --CCCCcc---cccccCCccC---CCCCCCeeee----CCeeecCCCcccCCC
Q 008406 266 --GLLGQF---CEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWYGVDC 306 (567)
Q Consensus 266 --G~~G~~---Ce~~~~~~C~---~~Cs~~G~C~----~G~C~C~~G~~G~~C 306 (567)
||+|.. +.+.+ +.|. +.|.+ |+|+ ..+|.|++||+|..-
T Consensus 107 g~G~~~~~~~~~c~di-deC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 107 GEGFRPNPITVILEDI-DECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNED 157 (162)
T ss_dssp CTTEEECTTTCCEEEC-CHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTT
T ss_pred CCCcccCCCCCccCcc-ccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCC
Confidence 898852 22332 3453 45875 7997 459999999998753
No 33
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.98 E-value=1.9e-05 Score=87.27 Aligned_cols=88 Identities=18% Similarity=0.294 Sum_probs=63.0
Q ss_pred Cceee-cCCCCCcc--ccccCccCCCCC-CCC--CCCCC---EEecCCC--eEE-eCCCCcCCCCCc-------------
Q 008406 99 GRWLS-GCDSVAKE--VDLVEMIGGKSC-KSD--CSGQG---VCNHELG--QCR-CFHGFRGKGCSE------------- 153 (567)
Q Consensus 99 G~~~~-~C~~g~~g--~~~~~~~~~~~C-~~~--Cs~~G---~C~~~~G--~C~-C~~G~~G~~Ce~------------- 153 (567)
|.|.| .|++||.| ..|. . .++| ..+ |.+++ +|....+ +|. |++||+|..|+.
T Consensus 23 Gsy~C~~C~~GytGdg~~Ce-D--iDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C 99 (634)
T 1yo8_A 23 GSWSCGFCPVGFLGNGTHCE-D--LDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVC 99 (634)
T ss_dssp SCEEECCCCTTBCSCSSSCC-B--CCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCE
T ss_pred CCeECCcCCCccCCCCCCcc-c--cccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcc
Confidence 45888 89999988 6675 3 3789 445 99999 9986555 798 999999999861
Q ss_pred cccccCCCCCCCCCCCCCcccccCC--CcccCCC----C--eEecCCCccc--CCCC
Q 008406 154 RIHFQCNFPKTPELPYGRWVVSICP--THCDTTR----A--MCFCGEGTKY--PNRP 200 (567)
Q Consensus 154 ~~~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~----g--~C~C~~G~~G--~~C~ 200 (567)
....+|.... ..|. +.|.... + .|.|++||.| ..|.
T Consensus 100 ~dideC~~~~-----------~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 100 EPENPCKDKT-----------HNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp EECCTTTTTC-----------CCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred cccccccCCC-----------cccccCccccccccccccceeeeccCCccccCcccc
Confidence 1234554321 2465 5676655 3 8999999998 5563
No 34
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.96 E-value=7.9e-07 Score=80.47 Aligned_cols=46 Identities=30% Similarity=0.544 Sum_probs=34.7
Q ss_pred ccccccCCCCCC---CcccccccCCccC---CCCCCCeeee----CCeeecCCCcccCCC
Q 008406 257 KEECDCKYDGLL---GQFCEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWYGVDC 306 (567)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C~---~~Cs~~G~C~----~G~C~C~~G~~G~~C 306 (567)
.+.|.|+ +||+ |..|+. .+.|. +.|.+ |+|+ ..+|.|++||+|..-
T Consensus 87 ~~~C~C~-~Gy~~~~g~~C~d--ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 87 QVDPICG-KGYSRIKGTQCED--IDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp CCCTTTC-TTEEEEETTEEEE--CCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCTT
T ss_pred CCcccCC-CccccCCCCccCc--cccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCCC
Confidence 3678999 9995 999973 24563 45985 6997 348999999998753
No 35
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.81 E-value=1.3e-05 Score=72.54 Aligned_cols=62 Identities=29% Similarity=0.875 Sum_probs=47.5
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcc-cCCCC--eEecCCCc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHC-DTTRA--MCFCGEGT 194 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C-~~~~g--~C~C~~G~ 194 (567)
++| +++|.++|+|....| .|.|++||+|..|+.. .+|.... ..|...| ....| .|.|++||
T Consensus 49 deC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~--deC~~~~-----------~~C~~~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 49 DQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD--ATCNIKN-----------GRCKQFCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp -CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE--CCTTSGG-----------GSCSSBCCCCSSSCCCCBCCTTE
T ss_pred CcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC--ccccCCC-----------CCCcCCCCCCCCCCEEeEcCCCc
Confidence 678 778999999986655 8999999999999874 5676421 1365677 55544 89999999
Q ss_pred c
Q 008406 195 K 195 (567)
Q Consensus 195 ~ 195 (567)
.
T Consensus 116 ~ 116 (146)
T 1x7a_L 116 R 116 (146)
T ss_dssp E
T ss_pred E
Confidence 8
No 36
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.80 E-value=1.3e-05 Score=59.78 Aligned_cols=41 Identities=22% Similarity=0.454 Sum_probs=31.6
Q ss_pred ccccCccCCCCC-CCCCCCCCEEec------CCC-eEEeCCCCcCCCCCcc
Q 008406 112 VDLVEMIGGKSC-KSDCSGQGVCNH------ELG-QCRCFHGFRGKGCSER 154 (567)
Q Consensus 112 ~~~~~~~~~~~C-~~~Cs~~G~C~~------~~G-~C~C~~G~~G~~Ce~~ 154 (567)
..|..++ ++| +++|.|+|+|.. ..+ +|.|++||+|..||..
T Consensus 2 ~~c~~~~--~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 2 TSHLVKC--AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp -CCEEEC--CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCcccC--CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 3455455 899 889999999942 112 7999999999999985
No 37
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.78 E-value=4.7e-06 Score=72.50 Aligned_cols=99 Identities=26% Similarity=0.484 Sum_probs=61.0
Q ss_pred CCC-CCCCCCCCEEecC-CC--eEEeCCCCcCCCCCcccc-ccCCCCCCCCCCCCCcccccCCCcccCCC-CeEecCCCc
Q 008406 121 KSC-KSDCSGQGVCNHE-LG--QCRCFHGFRGKGCSERIH-FQCNFPKTPELPYGRWVVSICPTHCDTTR-AMCFCGEGT 194 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~-~G--~C~C~~G~~G~~Ce~~~~-~~C~~~~~~~~~~g~~~~~~C~g~C~~~~-g~C~C~~G~ 194 (567)
++| +++|.+ +|... .| +|.|++||+|..++...+ .+|.. ..|.+.|.... ..|.|++||
T Consensus 5 deC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~-------------~~C~~~C~~~~~y~C~C~~Gy 69 (118)
T 1dx5_I 5 DPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQ-------------TACPADCDPNTQASCECPEGY 69 (118)
T ss_dssp CGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCS-------------SEEECEECTTSTTCEECCTTE
T ss_pred ccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCC-------------CCCCCcccCCCCeEeECCCCc
Confidence 677 667874 99865 44 899999999986643211 12322 24556666532 389999999
Q ss_pred c---cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCcccCCCcccccccccccccccccCCCCCCCcc
Q 008406 195 K---YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQF 271 (567)
Q Consensus 195 ~---G~~C~~~~~C~~~~~~~~c~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~ 271 (567)
. |..|...+.| .. ..+| .+.|.+..+ .++|.|+ +||+|..
T Consensus 70 ~~~~g~~C~dideC-----------------------~~--~~~C--~~~C~n~~g---------~y~C~C~-~G~~g~~ 112 (118)
T 1dx5_I 70 ILDDGFICTDIDEC-----------------------EN--GGFC--SGVCHNLPG---------TFECICG-PDSALAG 112 (118)
T ss_dssp EEETTTEEEECCHH-----------------------HH--CSSC--SSEEEECSS---------SEEEEEC-SSSSCEE
T ss_pred cCCCCCcccccccc-----------------------CC--CCCC--cCeEEeCCC---------CEEEECC-CCCccCC
Confidence 8 4444211112 10 1345 567765432 5799998 9998753
No 38
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.76 E-value=4.9e-06 Score=89.51 Aligned_cols=75 Identities=24% Similarity=0.654 Sum_probs=37.3
Q ss_pred ecCCCCCccccccCccCCCCCCCCCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCC--Cc
Q 008406 103 SGCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--TH 180 (567)
Q Consensus 103 ~~C~~g~~g~~~~~~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g~ 180 (567)
..|..++.+..|. ..+|...|.+ |+|+. .++|.|++||+|..|+.. .|.. .|. +.
T Consensus 379 ~~C~~~~~g~~c~----~~~C~~~C~n-G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~g~ 435 (463)
T 2wg3_C 379 EECRATVQPAQTL----TSECSRLCRN-GYCTP-TGKCCCSPGWEGDFCRTA---KCEP--------------ACRHGGV 435 (463)
T ss_dssp GGGCCCCCCCCCC----CCHHHHHCCS-EEECT-TSCEEECTTEESTTSCEE---CC-----------------------
T ss_pred ccCCCCCcCCCCc----cccccCCCCC-CccCC-CCeECCCCCcCCCcCCcC---cCCC--------------CCCCCCE
Confidence 4678888877654 3678557986 99985 579999999999999864 3432 244 45
Q ss_pred ccCCCCeEecCCCcccCCCCC
Q 008406 181 CDTTRAMCFCGEGTKYPNRPV 201 (567)
Q Consensus 181 C~~~~g~C~C~~G~~G~~C~~ 201 (567)
|... ..|.|.+||+|..|+.
T Consensus 436 C~~~-~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 436 CVRP-NKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp ---------------------
T ss_pred ECCC-CEEECCCCcccCCCCC
Confidence 5543 6899999999988854
No 39
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.71 E-value=1.6e-05 Score=59.24 Aligned_cols=43 Identities=21% Similarity=0.422 Sum_probs=33.7
Q ss_pred CcccccccCCccCCCCCCCeeee---------CCeeecCCCcccCCCCCCcc
Q 008406 269 GQFCEVPVSSTCVNQCSGHGHCR---------GGFCQCDSGWYGVDCSIPSV 311 (567)
Q Consensus 269 G~~Ce~~~~~~C~~~Cs~~G~C~---------~G~C~C~~G~~G~~C~~~~~ 311 (567)
|.+|++.+++.-.++|.|+|+|. ..+|.|.+||+|.+|++.+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 67788876655568999999993 34899999999999997653
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.65 E-value=7.5e-06 Score=77.54 Aligned_cols=65 Identities=34% Similarity=0.897 Sum_probs=19.2
Q ss_pred CCCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCCc
Q 008406 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGT 194 (567)
Q Consensus 120 ~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~ 194 (567)
.++| +++|.++|+|....| .|.|++||+|..|+..+..+|.... ..|...|....| .|.|++||
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~-----------~~C~~~C~n~~gsy~C~C~~Gy 110 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN-----------GDCDQFCHEEQNSVVCSCARGY 110 (195)
T ss_dssp ---------------------------------------CCGGGTGG-----------GGCSSEEEEETTEEEEECCTTE
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCC-----------CCCCCEeECCCCCeEEECCCCc
Confidence 3788 778999999976555 7999999999999874224565421 246667776655 89999999
Q ss_pred c
Q 008406 195 K 195 (567)
Q Consensus 195 ~ 195 (567)
.
T Consensus 111 ~ 111 (195)
T 1nfu_B 111 T 111 (195)
T ss_dssp E
T ss_pred e
Confidence 8
No 41
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.63 E-value=1.1e-05 Score=89.28 Aligned_cols=50 Identities=32% Similarity=0.741 Sum_probs=44.6
Q ss_pred cccCCCCCCCcccccccCCccCCCCCCCeeeeCCeeecCCCcccCCCCCCccc
Q 008406 260 CDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (567)
Q Consensus 260 C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~~~~~ 312 (567)
..|. +||+|.+|.+ +..|+..|++||.|+.|.|+|.+||.|.+|+.+.+.
T Consensus 520 ~~C~-~gw~g~dc~i--~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~~~~ 569 (725)
T 2e26_A 520 FDKQ-QTWAIDNVYI--GDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEPETS 569 (725)
T ss_dssp CCTT-CCEEEEEEEE--ESCSSGGGGGSEEEETTEEEECTTEESTTSCEESSC
T ss_pred CccC-CCcccccccc--cCCCCcccCCCcEECCCCEeeCCCccCCCcCccCCC
Confidence 4788 9999999994 248999999999999999999999999999987654
No 42
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.61 E-value=3.9e-05 Score=68.93 Aligned_cols=71 Identities=25% Similarity=0.543 Sum_probs=48.9
Q ss_pred CCCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC---eEecCCC
Q 008406 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA---MCFCGEG 193 (567)
Q Consensus 120 ~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g---~C~C~~G 193 (567)
.++| +++|.++|+|....| .|.|++||+|..|+..+ ..|..-. +....|...|....+ .|.|++|
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~-~~c~~c~--------~~~~~C~~~C~~~~g~~y~C~C~~G 117 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHK-DDQLICV--------NENGGCEQYCSDHTGTKRSCRCHEG 117 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEG-GGCCSTT--------TGGGGCSSEEECCTTSCCEEECCTT
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCc-ccccccc--------CCCCCccCEeECCCCCCEEEECCCC
Confidence 3678 778999999987666 89999999999998631 2221100 011235557766544 8999999
Q ss_pred cc----cCCC
Q 008406 194 TK----YPNR 199 (567)
Q Consensus 194 ~~----G~~C 199 (567)
|. |..|
T Consensus 118 y~l~~dG~~C 127 (142)
T 2c4f_L 118 YSLLADGVSC 127 (142)
T ss_dssp EEECTTSSCE
T ss_pred ceECCCCCCC
Confidence 98 5555
No 43
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.56 E-value=1.2e-05 Score=71.61 Aligned_cols=64 Identities=33% Similarity=0.877 Sum_probs=18.8
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCCcc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~~ 195 (567)
++| +++|.++|+|....+ .|.|++||+|..|+..+..+|.... ..|...|....| .|.|.+||.
T Consensus 43 d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~-----------~~C~~~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN-----------GDCDQFCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------------CCGGGTGG-----------GGCSSEEEEETTEEEEECCTTEE
T ss_pred CcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCC-----------CCCCCEeECCCCCEEEECCCCcE
Confidence 678 678999999976554 7999999999999874224565321 236667766655 899999999
No 44
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.53 E-value=4e-05 Score=68.72 Aligned_cols=85 Identities=20% Similarity=0.352 Sum_probs=57.1
Q ss_pred eeecCCCCCccc---------cccCccCCCCC-CC---CCCCCCEEecCCC--eEEeCCCCcCCCCCcc----------c
Q 008406 101 WLSGCDSVAKEV---------DLVEMIGGKSC-KS---DCSGQGVCNHELG--QCRCFHGFRGKGCSER----------I 155 (567)
Q Consensus 101 ~~~~C~~g~~g~---------~~~~~~~~~~C-~~---~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~----------~ 155 (567)
|.+.|.+||.|. .|. ..++| .. +|.++++|....| +|.|++||+|..++.. +
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~---dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~d 95 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCD---DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQD 95 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCE---ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEE
T ss_pred CEEeCCCCCcCccccccCCCCcCC---ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCC
Confidence 456777788763 342 23788 33 6999999987665 7999999999865421 1
Q ss_pred cccCCCCCCCCCCCCCcccccCC--CcccCCCC--eEecCCCcccCCC
Q 008406 156 HFQCNFPKTPELPYGRWVVSICP--THCDTTRA--MCFCGEGTKYPNR 199 (567)
Q Consensus 156 ~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~g--~C~C~~G~~G~~C 199 (567)
..+|.... ..|. +.|....| .|.|++||.|...
T Consensus 96 ideC~~~~-----------~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 96 VDECSSGQ-----------HQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp CCHHHHTC-----------CCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred ccCccCcC-----------CCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 23343211 2465 67877666 7999999998654
No 45
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.45 E-value=3.6e-05 Score=69.11 Aligned_cols=67 Identities=22% Similarity=0.510 Sum_probs=48.1
Q ss_pred CCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccCCCCCCCe---eee-----CCeeecCCCcc--
Q 008406 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHG---HCR-----GGFCQCDSGWY-- 302 (567)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G---~C~-----~G~C~C~~G~~-- 302 (567)
..+|.++|.|....+ .++|.|+ +||+|..|+..+...-...|.+++ +|+ ...|.|.+||+
T Consensus 52 ~~pC~n~g~C~~~~g---------~y~C~C~-~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~ 121 (142)
T 2c4f_L 52 SSPCQNGGSCKDQLQ---------SYICFCL-PAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL 121 (142)
T ss_dssp GCCCCTTCEEEEETT---------EEEEECC-TTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEEC
T ss_pred CCCcCCCCEEeCCCC---------CEEeeCC-CCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceEC
Confidence 567888899965432 5799999 999999998743222112344555 886 34899999999
Q ss_pred --cCCCCCC
Q 008406 303 --GVDCSIP 309 (567)
Q Consensus 303 --G~~C~~~ 309 (567)
|..|+..
T Consensus 122 ~dG~~C~~~ 130 (142)
T 2c4f_L 122 ADGVSCTPT 130 (142)
T ss_dssp TTSSCEEES
T ss_pred CCCCCCCCC
Confidence 8888754
No 46
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.44 E-value=4.3e-05 Score=76.28 Aligned_cols=52 Identities=35% Similarity=0.819 Sum_probs=41.6
Q ss_pred cccccccCCCCCCCcccccccCC--------ccCC-----CCCCCeeeeCCeeecCCCc------ccCCCCC
Q 008406 256 FKEECDCKYDGLLGQFCEVPVSS--------TCVN-----QCSGHGHCRGGFCQCDSGW------YGVDCSI 308 (567)
Q Consensus 256 ~~g~C~C~~~G~~G~~Ce~~~~~--------~C~~-----~Cs~~G~C~~G~C~C~~G~------~G~~C~~ 308 (567)
..|.|.|. +||+|..|+.+... .|.. .|+++|+|+-|.|.|..+| +|..|+.
T Consensus 205 ~CG~C~C~-~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 205 ECGICRCD-TGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp ETTEEEEC-TTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCSSTTCEEESTTSCE
T ss_pred CCCceeCC-CCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCCCCCeeEeeEeccc
Confidence 57899998 99999999865332 5752 5999999999999998886 5666653
No 47
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.44 E-value=0.00012 Score=50.30 Aligned_cols=33 Identities=33% Similarity=0.987 Sum_probs=28.2
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSE 153 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~ 153 (567)
++| +++|.++|+|....+ .|.|++||+|..|+.
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 678 778999999976555 799999999999973
No 48
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.41 E-value=3e-05 Score=73.38 Aligned_cols=65 Identities=26% Similarity=0.673 Sum_probs=22.6
Q ss_pred CCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccC---CCCCCCeeee----CCeeecCCCcc---
Q 008406 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWY--- 302 (567)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~---~~Cs~~G~C~----~G~C~C~~G~~--- 302 (567)
..+|.++|.|....+ .+.|.|+ +||+|..|+..+...|. ..|.+ +|+ ...|.|.+||+
T Consensus 47 ~~pC~ngg~C~n~~g---------~y~C~C~-~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 47 TSPCQNQGKCKDGLG---------EYTCTCL-EGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCCCCCCEeECCCC---------CeeEeCC-CCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCC
Confidence 567888899976532 5799999 99999999875423464 25765 897 34899999999
Q ss_pred -cCCCCCC
Q 008406 303 -GVDCSIP 309 (567)
Q Consensus 303 -G~~C~~~ 309 (567)
|..|+..
T Consensus 115 dG~~C~~~ 122 (195)
T 1nfu_B 115 NGKACIPT 122 (195)
T ss_dssp TSSCEEES
T ss_pred CCCccccC
Confidence 9999764
No 49
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.40 E-value=4e-05 Score=66.58 Aligned_cols=82 Identities=20% Similarity=0.529 Sum_probs=57.1
Q ss_pred CCceeecCCCCCccccccCccCCCCCCCCCCCC---CEEecCC-CeEEeCCCCc---CCCCCccccccCCCCCCCCCCCC
Q 008406 98 IGRWLSGCDSVAKEVDLVEMIGGKSCKSDCSGQ---GVCNHEL-GQCRCFHGFR---GKGCSERIHFQCNFPKTPELPYG 170 (567)
Q Consensus 98 ~G~~~~~C~~g~~g~~~~~~~~~~~C~~~Cs~~---G~C~~~~-G~C~C~~G~~---G~~Ce~~~~~~C~~~~~~~~~~g 170 (567)
.|.|.+.|.+||.|.... .++|...|.++ ++|.... .+|.|++||+ |..|+. ..+|...
T Consensus 21 ~g~y~C~C~~Gy~g~~~~----~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~d--ideC~~~-------- 86 (118)
T 1dx5_I 21 QTSYLCVCAEGFAPIPHE----PHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICTD--IDECENG-------- 86 (118)
T ss_dssp SSCEEEECCTTEEEETTE----EEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEEE--CCHHHHC--------
T ss_pred CCCEEeECCCCccccCCC----CCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCcccc--ccccCCC--------
Confidence 589999999999987542 13443335443 7786532 2899999999 888853 3556531
Q ss_pred CcccccCCCcccCCCC--eEecCCCcccC
Q 008406 171 RWVVSICPTHCDTTRA--MCFCGEGTKYP 197 (567)
Q Consensus 171 ~~~~~~C~g~C~~~~g--~C~C~~G~~G~ 197 (567)
..|.+.|....| .|.|++||.|.
T Consensus 87 ----~~C~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 87 ----GFCSGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp ----SSCSSEEEECSSSEEEEECSSSSCE
T ss_pred ----CCCcCeEEeCCCCEEEECCCCCccC
Confidence 246677877655 89999999863
No 50
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.38 E-value=0.0001 Score=68.37 Aligned_cols=36 Identities=31% Similarity=0.792 Sum_probs=32.0
Q ss_pred cCCCCCCCCCCCCCEEecCCCeEEeCCCCcCCCCCcc
Q 008406 118 IGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (567)
Q Consensus 118 ~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (567)
|....|+..|+|+|.|+. .++|.|++||+|..|+..
T Consensus 146 C~~~~C~~~C~ngG~Cv~-P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 146 CQQAECPGGCRNGGFCNE-RRICECPDGFHGPHCEGT 181 (188)
T ss_dssp ECCCCCTTCCCTTCEECT-TSCEECCTTCBTTTTCBC
T ss_pred ccCCccCCCCCCCCEeCC-CCcccCcCCCCCCCCcCC
Confidence 445689889999999996 899999999999999974
No 51
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.31 E-value=9.5e-05 Score=68.55 Aligned_cols=40 Identities=25% Similarity=0.715 Sum_probs=32.9
Q ss_pred CcccccccCCccCCCCCCCeeee-CCeeecCCCcccCCCCCCcc
Q 008406 269 GQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (567)
Q Consensus 269 G~~Ce~~~~~~C~~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~ 311 (567)
...|..+ .|.+.|.|+|.|+ .+.|+|++||+|.+|++.+.
T Consensus 143 ~K~C~~~---~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~~~~ 183 (188)
T 2ygo_A 143 FKTCQQA---ECPGGCRNGGFCNERRICECPDGFHGPHCEGTKH 183 (188)
T ss_dssp EEEECCC---CCTTCCCTTCEECTTSCEECCTTCBTTTTCBC--
T ss_pred cccccCC---ccCCCCCCCCEeCCCCcccCcCCCCCCCCcCCcc
Confidence 4455554 7899999999998 78999999999999998753
No 52
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.27 E-value=0.00019 Score=61.85 Aligned_cols=60 Identities=30% Similarity=0.583 Sum_probs=42.6
Q ss_pred CCCCCcccCCCcccccccccccccccccCCCCCCCcccccccC-CccC---CCCCCCeeee----CCeeecCCCcccCCC
Q 008406 235 NGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS-STCV---NQCSGHGHCR----GGFCQCDSGWYGVDC 306 (567)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~-~~C~---~~Cs~~G~C~----~G~C~C~~G~~G~~C 306 (567)
.|.++|.|....+ .++|.|. +||+|..|+..++ ..|. ..|.. +|+ ...|.|.+||+|...
T Consensus 21 ~C~~~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~ 88 (114)
T 1aut_L 21 LCCGHGTCIDGIG---------SFSCDCR-SGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDD 88 (114)
T ss_dssp TTTTSEEECCCSS---------CCCEEEC-TTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEECTT
T ss_pred cCCCcCCCCCCCC---------CcEeeCC-CCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeECCC
Confidence 4788899976533 6799999 9999999987532 2343 12332 886 348999999996443
No 53
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.27 E-value=5.6e-05 Score=67.17 Aligned_cols=65 Identities=26% Similarity=0.673 Sum_probs=21.8
Q ss_pred CCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccC---CCCCCCeeee----CCeeecCCCcc---
Q 008406 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWY--- 302 (567)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~---~~Cs~~G~C~----~G~C~C~~G~~--- 302 (567)
..+|.++|.|..... .++|.|+ +||+|..|+..+.+.|. ..|.+ +|+ ...|.|.+||+
T Consensus 47 ~~pC~n~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 47 TSPCQNQGKCKDGLG---------EYTCTCL-EGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCCCCcCCcccCCC---------CEEeeCC-CCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECC
Confidence 457888899975432 5799999 99999999875423464 24665 897 34899999999
Q ss_pred -cCCCCCC
Q 008406 303 -GVDCSIP 309 (567)
Q Consensus 303 -G~~C~~~ 309 (567)
|..|+..
T Consensus 115 ~g~~C~~~ 122 (134)
T 2vh0_B 115 NGKACIPT 122 (134)
T ss_dssp TSSCEEES
T ss_pred CCCccCcC
Confidence 8888653
No 54
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.26 E-value=0.0001 Score=66.58 Aligned_cols=63 Identities=29% Similarity=0.701 Sum_probs=48.1
Q ss_pred CCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccC---CCCCCCeee-e----CCeeecCCCcc--
Q 008406 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV---NQCSGHGHC-R----GGFCQCDSGWY-- 302 (567)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~---~~Cs~~G~C-~----~G~C~C~~G~~-- 302 (567)
..+|.++|.|....+ .++|.|+ +||+|..|+.. +.|. ..|.+ +| + ...|.|++||+
T Consensus 53 ~~pC~n~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~--deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~ 118 (146)
T 1x7a_L 53 PNPCLNGGLCKDDIN---------SYECWCQ-VGFEGKNCELD--ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLA 118 (146)
T ss_dssp SCSSCTTCEEEECSS---------CEEEECC-SSEESTTTCEE--CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEEC
T ss_pred CCCCCCCCEeECCCC---------CEEEecC-CCCcCCcCCCC--ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeC
Confidence 567888899975532 5799999 99999999865 3454 24654 78 5 45899999999
Q ss_pred --cCCCCCC
Q 008406 303 --GVDCSIP 309 (567)
Q Consensus 303 --G~~C~~~ 309 (567)
|..|+..
T Consensus 119 ~dG~~C~~~ 127 (146)
T 1x7a_L 119 PDQKSCKPA 127 (146)
T ss_dssp TTSSSEEEC
T ss_pred CCCCcCCCC
Confidence 8888754
No 55
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.23 E-value=0.00024 Score=72.26 Aligned_cols=67 Identities=25% Similarity=0.725 Sum_probs=49.9
Q ss_pred CCCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCCc
Q 008406 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGT 194 (567)
Q Consensus 120 ~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~ 194 (567)
.++| +++|.++|+|....+ .|.|++||+|..|+.. ..+|..... ..|...|.+..+ .|.|.+||
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~-~~eC~~~~~----------~~C~~~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELA-KNECHPERT----------DGCQHFCLPGQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCC-SSSCCTTCT----------TSCSSEEECCSSSCEEECCTTE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccC-cccCCCCCC----------CCCcCccccCCCeeEEeccccc
Confidence 3678 778999999975443 7999999999999853 467764210 247667877655 89999999
Q ss_pred ccC
Q 008406 195 KYP 197 (567)
Q Consensus 195 ~G~ 197 (567)
.|.
T Consensus 74 ~~~ 76 (317)
T 3h5c_B 74 RLG 76 (317)
T ss_dssp ECC
T ss_pred ccc
Confidence 864
No 56
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.21 E-value=0.0003 Score=56.80 Aligned_cols=58 Identities=28% Similarity=0.654 Sum_probs=43.3
Q ss_pred CCCCCCcccCCCcccccccccccccccccCCCCCC--CcccccccCCcc--CCCCCCCeeee----CCeeecCCCcccCC
Q 008406 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL--GQFCEVPVSSTC--VNQCSGHGHCR----GGFCQCDSGWYGVD 305 (567)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~--G~~Ce~~~~~~C--~~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (567)
.+|.+ |.|.+..+ .++|.|+ +||+ |..|+.. +.| .++|.+ |+|+ ...|.|++||.|..
T Consensus 12 ~~C~~-g~C~n~~g---------~y~C~C~-~Gy~~~g~~C~di--deC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 12 DVCKH-GQCINTDG---------SYRCECP-FGYILAGNECVDT--DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp TSCSS-SEECCCSS---------CCCEECC-TTEEEETTEEEEC--CGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CCcCC-CEEEecCC---------CEEEECC-CCeECCCCccCCc--ccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 45654 78876543 6799999 9997 9999642 345 467875 6997 34899999999864
No 57
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.20 E-value=0.00043 Score=70.31 Aligned_cols=60 Identities=23% Similarity=0.535 Sum_probs=46.6
Q ss_pred CCCCCCCcccCCCcccccccccccccccccCCCCCCCcccccccCCccC----CCCCCCeeee----CCeeecCCCcccC
Q 008406 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV----NQCSGHGHCR----GGFCQCDSGWYGV 304 (567)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~~~~~C~----~~Cs~~G~C~----~G~C~C~~G~~G~ 304 (567)
..+|.++|.|..... .++|.|. +||+|..|+..++ .|. ++|.+ +|. ...|.|.+||.|.
T Consensus 10 ~~pC~~~g~C~~~~~---------~~~C~C~-~g~~g~~C~~~~~-eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 10 SQPCLHNGSCQDSIW---------GYTCTCS-PGYEGSNCELAKN-ECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp SCCCTTTCCCCCCSS---------SCCCCCS-SSCCSSSSCCCSS-SCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred CCCCCCCCEeECCCC---------CeEEECC-CCCcCCccccCcc-cCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 567889999976532 5799999 9999999985543 453 57876 897 3589999999985
Q ss_pred C
Q 008406 305 D 305 (567)
Q Consensus 305 ~ 305 (567)
.
T Consensus 77 ~ 77 (317)
T 3h5c_B 77 E 77 (317)
T ss_dssp T
T ss_pred c
Confidence 3
No 58
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=97.11 E-value=0.00049 Score=71.91 Aligned_cols=28 Identities=32% Similarity=0.763 Sum_probs=22.9
Q ss_pred CCCCCCE-EecC------CCeEEeCCCCcCCCCCc
Q 008406 126 DCSGQGV-CNHE------LGQCRCFHGFRGKGCSE 153 (567)
Q Consensus 126 ~Cs~~G~-C~~~------~G~C~C~~G~~G~~Ce~ 153 (567)
.|++|+. |+.. .|+|.|..+++|..||.
T Consensus 267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CEr 301 (403)
T 2y38_A 267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDR 301 (403)
T ss_dssp CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCE
T ss_pred ccCCCccccCCCCCCCccceEeECcCcCcCCCCCC
Confidence 4899886 9743 36799999999999986
No 59
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.09 E-value=0.0006 Score=50.19 Aligned_cols=35 Identities=37% Similarity=0.903 Sum_probs=28.0
Q ss_pred CCC-CC---CCCCCCEEe--cCCC--eEEeCCCCcCCCCCccc
Q 008406 121 KSC-KS---DCSGQGVCN--HELG--QCRCFHGFRGKGCSERI 155 (567)
Q Consensus 121 ~~C-~~---~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~~ 155 (567)
++| ++ +|.++|+|. ...+ .|.|++||+|..|+..+
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 567 33 799999998 4333 79999999999999853
No 60
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.08 E-value=0.00039 Score=49.34 Aligned_cols=29 Identities=34% Similarity=0.843 Sum_probs=24.2
Q ss_pred CCCCCCEEe--cCCC--eEEeCCCCcCCCCCcc
Q 008406 126 DCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 126 ~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (567)
+|.++|+|. ...+ .|.|++||+|..|+..
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 799999997 2223 7999999999999874
No 61
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.99 E-value=5.1e-05 Score=69.58 Aligned_cols=57 Identities=25% Similarity=0.579 Sum_probs=34.0
Q ss_pred ccCCceeecCCCCCc----cccccCccCCCCCC---CCC--CCCCEEecCCC------eEEeCCCCc-CCCCCc
Q 008406 96 AEIGRWLSGCDSVAK----EVDLVEMIGGKSCK---SDC--SGQGVCNHELG------QCRCFHGFR-GKGCSE 153 (567)
Q Consensus 96 ~~~G~~~~~C~~g~~----g~~~~~~~~~~~C~---~~C--s~~G~C~~~~G------~C~C~~G~~-G~~Ce~ 153 (567)
.+.|.|.+.|.+||. |..|.+ +....|. ..| .++++|....+ +|.|++||. |..|+.
T Consensus 19 n~~gsy~C~C~~Gy~~~~~g~~C~d-~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~ 91 (162)
T 1uzk_A 19 NTPGSYICDCPPDFELNPTRVGCVD-TRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEM 91 (162)
T ss_dssp EETTEEEEECCTTCEECTTSSBEEC-CCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEE
T ss_pred CCCCCEEEeCCCCCeECCCCCcccC-CCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCccc
Confidence 346999999999998 666662 2111262 123 45788875433 699999998 777763
No 62
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=96.99 E-value=0.00033 Score=72.80 Aligned_cols=28 Identities=25% Similarity=0.605 Sum_probs=20.6
Q ss_pred CCCCCCEEe----cCCCeEEeCCCCcCCCCCc
Q 008406 126 DCSGQGVCN----HELGQCRCFHGFRGKGCSE 153 (567)
Q Consensus 126 ~Cs~~G~C~----~~~G~C~C~~G~~G~~Ce~ 153 (567)
.|++||.+. ...+.|.|.+||+|..|+.
T Consensus 256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp CCTTSCSCEEECTTSCEEECCCTTEESTTSCE
T ss_pred cCCCCCcccCCCCCCCeeeeCcCCCcCCCccc
Confidence 388887542 1234789999999999987
No 63
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.95 E-value=0.00039 Score=69.34 Aligned_cols=59 Identities=29% Similarity=0.648 Sum_probs=44.7
Q ss_pred CCCCCEEecCCCeEEeCCCCcCCCCCccccc--------cCCCCCCCCCCCCCcccccCCCcccCCCCeEecCCCccc
Q 008406 127 CSGQGVCNHELGQCRCFHGFRGKGCSERIHF--------QCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKY 196 (567)
Q Consensus 127 Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~--------~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G 196 (567)
|+++|+|. .|.|.|.+||+|..|+..... .|..... ...|+|..++..|+|.|..++.+
T Consensus 198 C~g~G~~~--CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~---------~~~CSgrG~C~CG~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNN---------SIICSGLGDCVCGQCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEE--TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTT---------SCGGGGSEEEETTEEEECCCSST
T ss_pred cCCCCeEC--CCceeCCCCCcCCcceecCCccccccccccCCCCCC---------CCccCCCceEeCCeeECcCCCCC
Confidence 88999999 899999999999999854211 4653211 13688887778899999887653
No 64
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.91 E-value=9.5e-05 Score=54.36 Aligned_cols=39 Identities=23% Similarity=0.609 Sum_probs=31.7
Q ss_pred cccccCCCCCCCcccccccCCccCCCCCCCeeeeC--------CeeecCCCcccCCCCCC
Q 008406 258 EECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRG--------GFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 258 g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~--------G~C~C~~G~~G~~C~~~ 309 (567)
..|.|+ +||+ .++|.|+|+|+. ..|.|.+||+|.+|+..
T Consensus 3 ~~C~C~-~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCP-ETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CCBCCC-HHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeeECC-CCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 368888 7876 357899999972 28999999999999864
No 65
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.88 E-value=0.00058 Score=48.76 Aligned_cols=33 Identities=30% Similarity=0.735 Sum_probs=26.3
Q ss_pred CCC-C---CCCCCCCEEecCC----CeEEeCCCCcCCCCCcc
Q 008406 121 KSC-K---SDCSGQGVCNHEL----GQCRCFHGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~---~~Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~~ 154 (567)
++| + ++|.+ |+|.... -.|.|++||+|..||..
T Consensus 4 ~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp ECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred ccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 567 3 68998 9997432 27999999999999974
No 66
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.87 E-value=0.00091 Score=53.88 Aligned_cols=50 Identities=24% Similarity=0.561 Sum_probs=39.4
Q ss_pred cCCceeecCCCCCc--cccccCccCCCCC--CCCCCCCCEEecCCC--eEEeCCCCcCCC
Q 008406 97 EIGRWLSGCDSVAK--EVDLVEMIGGKSC--KSDCSGQGVCNHELG--QCRCFHGFRGKG 150 (567)
Q Consensus 97 ~~G~~~~~C~~g~~--g~~~~~~~~~~~C--~~~Cs~~G~C~~~~G--~C~C~~G~~G~~ 150 (567)
..|.|.+.|+.||. |..|. ++ ++| +++|.+ |+|....| .|.|++||+|..
T Consensus 22 ~~g~y~C~C~~Gy~~~g~~C~-di--deC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 22 TDGSYRCECPFGYILAGNECV-DT--DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CSSCCCEECCTTEEEETTEEE-EC--CGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred cCCCEEEECCCCeECCCCccC-Cc--ccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 35889999999997 77774 23 778 467875 79987666 799999999864
No 67
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.71 E-value=0.00072 Score=70.98 Aligned_cols=43 Identities=19% Similarity=0.532 Sum_probs=0.0
Q ss_pred CCCCcccccccCCccCCCCCCCeeee-CCeeecCCCcccCCCCCCcccC
Q 008406 266 GLLGQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSVMS 313 (567)
Q Consensus 266 G~~G~~Ce~~~~~~C~~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~~~ 313 (567)
++.|..|+.. ..+|.++|+|. ...|.|++||+|..|+...+..
T Consensus 360 n~~g~~CD~~-----t~~C~ngg~C~~~~~C~C~~G~~G~~Ce~c~C~~ 403 (426)
T 3zyj_B 360 SIGTNVCDNE-----LLHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEE 403 (426)
T ss_dssp -------------------------------------------------
T ss_pred CCCcCccccC-----cccCCCCCCcCCCCCCcCCCCCcCCCCcCCCCCC
Confidence 4568888753 25899999997 4499999999999999877653
No 68
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.70 E-value=0.00052 Score=76.00 Aligned_cols=46 Identities=28% Similarity=0.564 Sum_probs=40.7
Q ss_pred cCCCCCccccccCccCCCCCCCCCCCCCEEecCCCeEEeCCCCcCCCCCcc
Q 008406 104 GCDSVAKEVDLVEMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (567)
Q Consensus 104 ~C~~g~~g~~~~~~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (567)
.|.++|.|..|.. ...|+.+|++||.|. .|+|.|.+||+|++|+..
T Consensus 521 ~C~~gw~g~dc~i---~~~Cp~~C~ghG~C~--~G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYI---GDGCLDMCSGHGRCV--QGSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEE---ESCSSGGGGGSEEEE--TTEEEECTTEESTTSCEE
T ss_pred ccCCCcccccccc---cCCCCcccCCCcEEC--CCCEeeCCCccCCCcCcc
Confidence 4899999998872 257999999999999 899999999999999985
No 69
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.58 E-value=0.0015 Score=53.22 Aligned_cols=58 Identities=31% Similarity=0.686 Sum_probs=42.0
Q ss_pred CCCCcccCCCcccccccccccccccccCCCCCC----CcccccccCCccC-CCCCCCeeee----CCeeecCCCcccCCC
Q 008406 236 GSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL----GQFCEVPVSSTCV-NQCSGHGHCR----GGFCQCDSGWYGVDC 306 (567)
Q Consensus 236 C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~----G~~Ce~~~~~~C~-~~Cs~~G~C~----~G~C~C~~G~~G~~C 306 (567)
| +++.|.+..+ .++|.|+ +||+ |..|+. + ..|. ++|. ++|+ ...|.|+ |+.|..|
T Consensus 13 C-~~~~C~n~~g---------~y~C~C~-~G~~~~~~g~~C~d-i-deC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~ 76 (87)
T 1z6c_A 13 C-GTAVCKNIPG---------DFECECP-EGYRYNLKSKSCED-I-DECSENMCA--QLCVNYPGGYTCYCD-GKKGFKL 76 (87)
T ss_dssp B-TTSSCCCBTT---------BCCCSSS-TTCEEETTTTEEEC-C-CHHHHSCCS--SEECCCSSSCCEECC-SSSCCBC
T ss_pred C-CCCEeECCCC---------CEEEECC-CCceECCCCCcCCC-c-CeeCCCCCC--CEEEccCCCEEEECC-CCcCCcc
Confidence 6 6678865433 6799999 9999 889963 2 3453 6786 6897 4589998 8888777
Q ss_pred CCC
Q 008406 307 SIP 309 (567)
Q Consensus 307 ~~~ 309 (567)
+..
T Consensus 77 ~~~ 79 (87)
T 1z6c_A 77 AQD 79 (87)
T ss_dssp CTT
T ss_pred cCC
Confidence 653
No 70
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.51 E-value=0.0019 Score=44.04 Aligned_cols=28 Identities=32% Similarity=0.833 Sum_probs=24.1
Q ss_pred CCCCCCCeeee----CCeeecCCCcccCCCCC
Q 008406 281 VNQCSGHGHCR----GGFCQCDSGWYGVDCSI 308 (567)
Q Consensus 281 ~~~Cs~~G~C~----~G~C~C~~G~~G~~C~~ 308 (567)
.++|.++|+|+ ...|.|++||+|..|++
T Consensus 8 ~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 8 SNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp TCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred CCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 47899999997 34899999999999974
No 71
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.50 E-value=0.0012 Score=48.52 Aligned_cols=31 Identities=35% Similarity=0.879 Sum_probs=25.6
Q ss_pred CCCCCCCCEEe--cCCC--eEEeCCCCcCCCCCcc
Q 008406 124 KSDCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 124 ~~~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (567)
+++|.|+|+|. ...+ .|.|++||+|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 46799999997 3333 7999999999999975
No 72
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.49 E-value=0.00077 Score=51.49 Aligned_cols=34 Identities=32% Similarity=0.682 Sum_probs=27.8
Q ss_pred CCC-CCCCCCCCEEec-----C--CCeEEeCCCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNH-----E--LGQCRCFHGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-----~--~G~C~C~~G~~G~~Ce~~ 154 (567)
++| +++|.|+|+|.. . .-.|.|++||+|..|+..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 48 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTEN 48 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcC
Confidence 567 678999999974 1 227999999999999975
No 73
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.44 E-value=0.001 Score=54.14 Aligned_cols=62 Identities=31% Similarity=0.833 Sum_probs=43.4
Q ss_pred CCC-CCC--CCCCCEEecCCC--eEEeCCCCc----CCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEe
Q 008406 121 KSC-KSD--CSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCF 189 (567)
Q Consensus 121 ~~C-~~~--Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~ 189 (567)
++| .++ | ++|+|....| +|.|++||+ |..|+. ..+|.. ..|.+.|....| .|.
T Consensus 4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~d--ideC~~-------------~~C~~~C~n~~g~y~C~ 67 (87)
T 1z6c_A 4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCED--IDECSE-------------NMCAQLCVNYPGGYTCY 67 (87)
T ss_dssp CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEEC--CCHHHH-------------SCCSSEECCCSSSCCEE
T ss_pred ccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCC--cCeeCC-------------CCCCCEEEccCCCEEEE
Confidence 677 333 8 7889976555 799999999 788863 355643 357777877655 899
Q ss_pred cCCCcccCCC
Q 008406 190 CGEGTKYPNR 199 (567)
Q Consensus 190 C~~G~~G~~C 199 (567)
|+ |+.|..+
T Consensus 68 C~-g~~G~~~ 76 (87)
T 1z6c_A 68 CD-GKKGFKL 76 (87)
T ss_dssp CC-SSSCCBC
T ss_pred CC-CCcCCcc
Confidence 97 6655444
No 74
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.43 E-value=0.00087 Score=54.48 Aligned_cols=56 Identities=27% Similarity=0.589 Sum_probs=39.3
Q ss_pred CCCCcccCCCcccccccccccccccccCCCCCC-----CcccccccCCccC-C--CCCCCeeee----CCeeecCCCccc
Q 008406 236 GSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL-----GQFCEVPVSSTCV-N--QCSGHGHCR----GGFCQCDSGWYG 303 (567)
Q Consensus 236 C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~-----G~~Ce~~~~~~C~-~--~Cs~~G~C~----~G~C~C~~G~~G 303 (567)
|. +|.|.+..+ .++|.|+ +||+ |..|+. .+.|. + .|. +|+|+ ...|.|++||.|
T Consensus 13 C~-~g~C~n~~g---------~y~C~C~-~Gy~~~~~~g~~C~d--ideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 13 CG-RGQCVNTPG---------DFECKCD-EGYESGFMMMKNCMD--IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp TT-TSCEEEETT---------EEEECCC-SSEEECTTTSSSEEE--CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCC
T ss_pred CC-CCEEECCCC---------CEEeeCC-CCcCccCCCCCccCC--cccccCCCCcCC-CCEeEcCCCCEEEECcCCccc
Confidence 54 357765432 5799999 9998 788863 23553 3 375 58997 348999999988
Q ss_pred CC
Q 008406 304 VD 305 (567)
Q Consensus 304 ~~ 305 (567)
..
T Consensus 79 ~~ 80 (86)
T 1lmj_A 79 SP 80 (86)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 75
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.28 E-value=0.001 Score=50.47 Aligned_cols=34 Identities=26% Similarity=0.773 Sum_probs=28.9
Q ss_pred CCC-CCCCCCC--CEEecCCC--eEEeCCCCc-CCCCCcc
Q 008406 121 KSC-KSDCSGQ--GVCNHELG--QCRCFHGFR-GKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~--G~C~~~~G--~C~C~~G~~-G~~Ce~~ 154 (567)
++| +++|.++ |+|....| .|.|++||+ |..|+..
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 678 7789998 99986555 799999999 9999864
No 76
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.23 E-value=0.0013 Score=55.96 Aligned_cols=40 Identities=15% Similarity=0.362 Sum_probs=27.9
Q ss_pred CCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCCccc
Q 008406 143 FHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTKY 196 (567)
Q Consensus 143 ~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~~G 196 (567)
..||+|..|+. ++|.... ..|...|.+..+ .|.|++||.|
T Consensus 19 ~~~~~~~~Cd~---neC~~~~-----------~~C~~~C~n~~g~y~C~C~~Gy~g 60 (107)
T 2w2n_E 19 ENLYFQGAMGT---NECLDNN-----------GGCSYVCNDLKIGYECLCPDGFQL 60 (107)
T ss_dssp -CCCCSCCBSC---CGGGTGG-----------GGCSSEEECCSBSCEEECCTTCEE
T ss_pred CCCcCCCCCcC---ccCcCCC-----------CCCCCEeEeCCCCeEEECCCCccc
Confidence 47888999964 4665421 136667776644 8999999997
No 77
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.16 E-value=0.0041 Score=50.38 Aligned_cols=50 Identities=24% Similarity=0.521 Sum_probs=38.0
Q ss_pred cCCceeecCCCCCc-----cccccCccCCCCC-CC--CCCCCCEEecCCC--eEEeCCCCcCCC
Q 008406 97 EIGRWLSGCDSVAK-----EVDLVEMIGGKSC-KS--DCSGQGVCNHELG--QCRCFHGFRGKG 150 (567)
Q Consensus 97 ~~G~~~~~C~~g~~-----g~~~~~~~~~~~C-~~--~Cs~~G~C~~~~G--~C~C~~G~~G~~ 150 (567)
..|.|.+.|.+||. |..|. + .++| .. .|. +|+|....| .|.|++||+|..
T Consensus 21 ~~g~y~C~C~~Gy~~~~~~g~~C~-d--ideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 21 TPGDFECKCDEGYESGFMMMKNCM-D--IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp ETTEEEECCCSSEEECTTTSSSEE-E--CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred CCCCEEeeCCCCcCccCCCCCccC-C--cccccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence 46899999999998 55564 2 3788 33 376 589987666 799999999864
No 78
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.16 E-value=0.0026 Score=44.94 Aligned_cols=27 Identities=26% Similarity=0.556 Sum_probs=23.7
Q ss_pred CCCCCeeee------CCeeecCCCcccCCCCCC
Q 008406 283 QCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 283 ~Cs~~G~C~------~G~C~C~~G~~G~~C~~~ 309 (567)
+|.++|+|+ ...|.|.+||+|..|+..
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 799999996 348999999999999864
No 79
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.00 E-value=0.0053 Score=45.02 Aligned_cols=28 Identities=29% Similarity=0.667 Sum_probs=24.6
Q ss_pred CCCCCeeee--C----CeeecCCCcccCCCCCCc
Q 008406 283 QCSGHGHCR--G----GFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 283 ~Cs~~G~C~--~----G~C~C~~G~~G~~C~~~~ 310 (567)
+|.++|+|+ . ..|.|.+||+|..|+...
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 799999997 2 489999999999999864
No 80
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=95.93 E-value=0.0025 Score=46.66 Aligned_cols=30 Identities=30% Similarity=0.678 Sum_probs=24.7
Q ss_pred CCCCCCCEEecC----CC--eEEeCCCCcCCCCCcc
Q 008406 125 SDCSGQGVCNHE----LG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 125 ~~Cs~~G~C~~~----~G--~C~C~~G~~G~~Ce~~ 154 (567)
++|.|+|+|... .+ .|.|++||+|..||..
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 469999999841 22 8999999999999974
No 81
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=95.90 E-value=0.001 Score=59.69 Aligned_cols=47 Identities=26% Similarity=0.624 Sum_probs=33.0
Q ss_pred eEEeCCCCc---CCCCCccccccCCCCCCCCCCCCCcccccCC-CcccCCCC--eEecCCCcccCC
Q 008406 139 QCRCFHGFR---GKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTTRA--MCFCGEGTKYPN 198 (567)
Q Consensus 139 ~C~C~~G~~---G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-g~C~~~~g--~C~C~~G~~G~~ 198 (567)
.|.|++||+ |..|+. .++|.... ..|. +.|.+..| .|.|++||.|..
T Consensus 89 ~C~C~~Gy~~~~g~~C~d--ideC~~~~-----------~~C~~g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 89 DPICGKGYSRIKGTQCED--IDECEVFP-----------GVCKNGLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CTTTCTTEEEEETTEEEE--CCHHHHST-----------TCSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred cccCCCccccCCCCccCc--cccccCCC-----------CCCCCCEEECCCCCEEeeCCCCCccCC
Confidence 568999995 899973 46665321 1354 56777666 899999998653
No 82
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.89 E-value=0.0018 Score=54.95 Aligned_cols=44 Identities=36% Similarity=0.724 Sum_probs=14.6
Q ss_pred ccccccCCCCCCC---cccccccCCccC--CCCCCCeeee----CCeeecCCCcccCC
Q 008406 257 KEECDCKYDGLLG---QFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGVD 305 (567)
Q Consensus 257 ~g~C~C~~~G~~G---~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (567)
.++|.|+ +||+| ..|+. .+.|. ++|. ++|+ ...|.|.+||.|..
T Consensus 49 ~y~C~C~-~Gy~g~~g~~C~d--ideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 49 GYECLCP-DGFQLVAQRRCED--IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp SCEEECC-TTCEEETTTEEEC-------------------------------------
T ss_pred CeEEECC-CCccccCCCcccc--ccccCCCCCcC--CeeecCCCCEEEECCCCceECC
Confidence 5799999 99998 78973 23553 5675 6887 45899999998754
No 83
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.89 E-value=0.0053 Score=64.37 Aligned_cols=62 Identities=27% Similarity=0.674 Sum_probs=45.1
Q ss_pred CC-CCCCCCCCEEecCCC--eEEeCCCCc---CCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCC
Q 008406 122 SC-KSDCSGQGVCNHELG--QCRCFHGFR---GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEG 193 (567)
Q Consensus 122 ~C-~~~Cs~~G~C~~~~G--~C~C~~G~~---G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G 193 (567)
+| .++|...++|....| .|.|++||. |..|+. .++|... ..|...|.+..| .|.|.+|
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~d--ideC~~~------------~~C~~~C~n~~g~~~C~C~~g 67 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCED--IDECQDP------------DTCSQLCVNLEGGYKCQCEEG 67 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEE--CCCCSTT------------SSCSSCCBCCSSSCBCCCCTT
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccC--chhhhcc------------CCCCCccCCCccceeeecccc
Confidence 56 344555579976555 799999998 888963 5677632 257778887765 8999999
Q ss_pred cccC
Q 008406 194 TKYP 197 (567)
Q Consensus 194 ~~G~ 197 (567)
|.+.
T Consensus 68 ~~~~ 71 (400)
T 3p5b_L 68 FQLD 71 (400)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9864
No 84
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.88 E-value=0.0044 Score=44.12 Aligned_cols=27 Identities=33% Similarity=0.940 Sum_probs=23.2
Q ss_pred CCCCCCeeee--C----CeeecCCCcccCCCCCC
Q 008406 282 NQCSGHGHCR--G----GFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs~~G~C~--~----G~C~C~~G~~G~~C~~~ 309 (567)
++|.+ |+|. . ..|.|.+||+|.+|++.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 68998 9997 2 38999999999999874
No 85
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.65 E-value=0.0046 Score=47.08 Aligned_cols=30 Identities=27% Similarity=0.716 Sum_probs=25.3
Q ss_pred CCCCCCCeeeeC---------CeeecCCCcccCCCCCCc
Q 008406 281 VNQCSGHGHCRG---------GFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 281 ~~~Cs~~G~C~~---------G~C~C~~G~~G~~C~~~~ 310 (567)
.++|.|+|+|+. ..|.|.+||+|..|++.+
T Consensus 11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i 49 (63)
T 1hae_A 11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49 (63)
T ss_dssp HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCc
Confidence 368999999972 379999999999998654
No 86
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=95.51 E-value=0.0022 Score=66.08 Aligned_cols=32 Identities=41% Similarity=1.039 Sum_probs=28.7
Q ss_pred CccCCCCCCCeeeeCCeeecCCCcccCC--CCCC
Q 008406 278 STCVNQCSGHGHCRGGFCQCDSGWYGVD--CSIP 309 (567)
Q Consensus 278 ~~C~~~Cs~~G~C~~G~C~C~~G~~G~~--C~~~ 309 (567)
..|++.|+|||.|+.|.|.|.+||.|.+ |...
T Consensus 192 ~~Cp~~CsGhG~C~~g~C~Cd~G~~g~d~~C~~~ 225 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVSN 225 (387)
T ss_dssp SCCGGGGGGSEEEETTEEEECTTEEEETTEEEES
T ss_pred ccCccccCCCceecCCeEEecCCcccCCCccccc
Confidence 4799999999999999999999999986 7653
No 87
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.50 E-value=0.0056 Score=45.84 Aligned_cols=29 Identities=31% Similarity=0.712 Sum_probs=24.1
Q ss_pred CCCCCCEEecC----C--CeEEeCCCCcCCCCCcc
Q 008406 126 DCSGQGVCNHE----L--GQCRCFHGFRGKGCSER 154 (567)
Q Consensus 126 ~Cs~~G~C~~~----~--G~C~C~~G~~G~~Ce~~ 154 (567)
.|.|+|+|... . -.|.|++||+|.+||..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 59999999732 1 27999999999999975
No 88
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.50 E-value=0.003 Score=46.46 Aligned_cols=35 Identities=23% Similarity=0.406 Sum_probs=26.5
Q ss_pred ccCCCCCCCcccC--CCcccccccccccccccccCCCCCCCcccccc
Q 008406 231 IFTTNGSKPGWCN--VDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (567)
Q Consensus 231 ~~~~~C~~~G~C~--~~~~~~~~~g~c~~g~C~C~~~G~~G~~Ce~~ 275 (567)
....+|.++|.|. ... ..+.|.|+ +||+|..|+..
T Consensus 9 ~~~~pC~nGG~C~~~~~~---------~~~~C~C~-~GytG~~Ce~~ 45 (53)
T 1nql_B 9 SHDGYCLHDGVCMYIEAL---------DKYACNCV-VGYIGERCQYR 45 (53)
T ss_dssp TTCCEECTTCEEEEETTT---------TEEEEEEC-TTEESTTSCEE
T ss_pred CCCCCCCCCeEEeeecCC---------CCEEEecC-CCCcCCCCCcC
Confidence 3356788999996 221 14799998 99999999875
No 89
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.98 E-value=0.017 Score=50.12 Aligned_cols=35 Identities=29% Similarity=0.673 Sum_probs=26.9
Q ss_pred CCCCCCEEecC---CC--eEEeCCCCcCCCCCccccccCC
Q 008406 126 DCSGQGVCNHE---LG--QCRCFHGFRGKGCSERIHFQCN 160 (567)
Q Consensus 126 ~Cs~~G~C~~~---~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (567)
+|.|+|+|... .+ .|.|++||+|..|++....+|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~ 41 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 41 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCc
Confidence 49999999753 22 7999999999999986433443
No 90
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.86 E-value=0.0099 Score=51.64 Aligned_cols=61 Identities=25% Similarity=0.379 Sum_probs=42.1
Q ss_pred CCCCCcccCCCccccccccccccc-ccccCCCCCCCcccccccCCccCCCCCCCeeeeCCeeecCCCcccCCCCC
Q 008406 235 NGSKPGWCNVDPEEAYALKVQFKE-ECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSI 308 (567)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~g~c~~g-~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~ 308 (567)
+|.|+|+|...... ... +|.|+ +||+|.+|++.+...|.. +.| ..+++.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~-------~~~~~C~Cp-~g~~G~~Ce~~~~~~C~~---g~G--~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYF-------SNIHWCNCP-KKFGGQHCEIDKSKTCYE---GNG--HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTT-------TTCEEEECC-TTEESTTSCEESSCCSBC---SSC--TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCccc-------CCCCCccCC-CCCCCccccccCcCCCcc---ccc--ccceeeccccccCCcccC
Confidence 57888999543100 023 89999 999999999875433432 122 256888999999999976
No 91
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.81 E-value=0.12 Score=58.12 Aligned_cols=43 Identities=37% Similarity=0.766 Sum_probs=31.8
Q ss_pred ccccccCCCCCC---CcccccccCCccC--CCCCCCeeee----CCeeecCCCcccC
Q 008406 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGV 304 (567)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G~ 304 (567)
.++|.|+ +||. |..|+.. ..|. +.|+ ..|+ ...|.|.+||.+.
T Consensus 314 ~~~C~C~-~G~~~~~~~~C~di--deC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 314 GYECLCP-DGFQLVAQRRCEDI--DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCCCC-SSSCCCSSSCCCCC--CCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred CcEEeCC-CCeEcCCCCcccCc--cccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 5799999 9999 7888732 3453 4565 3675 4589999999863
No 92
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=94.77 E-value=0.0051 Score=63.39 Aligned_cols=31 Identities=39% Similarity=0.897 Sum_probs=27.5
Q ss_pred CCCCCCCCCCCEEecCCCeEEeCCCCcCCC--CCc
Q 008406 121 KSCKSDCSGQGVCNHELGQCRCFHGFRGKG--CSE 153 (567)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~--Ce~ 153 (567)
..||+.|+|||.|+ .|+|.|.+||.|++ |..
T Consensus 192 ~~Cp~~CsGhG~C~--~g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 192 EPCPSYCSGHGDCI--SGVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp SCCGGGGGGSEEEE--TTEEEECTTEEEETTEEEE
T ss_pred ccCccccCCCceec--CCeEEecCCcccCCCcccc
Confidence 56999999999998 69999999999975 654
No 93
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.58 E-value=0.23 Score=55.82 Aligned_cols=20 Identities=25% Similarity=0.898 Sum_probs=13.6
Q ss_pred CCCcccCCCC--eEecCCCccc
Q 008406 177 CPTHCDTTRA--MCFCGEGTKY 196 (567)
Q Consensus 177 C~g~C~~~~g--~C~C~~G~~G 196 (567)
|...|....+ .|.|++||.+
T Consensus 304 C~~~C~~~~~~~~C~C~~G~~~ 325 (699)
T 1n7d_A 304 CSHVCNDLKIGYECLCPDGFQL 325 (699)
T ss_dssp SCTTCCCCTTCCCCCCCSSSCC
T ss_pred cCCCcccCCCCcEEeCCCCeEc
Confidence 5566666543 7888888873
No 94
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.57 E-value=0.013 Score=43.93 Aligned_cols=28 Identities=29% Similarity=0.755 Sum_probs=24.0
Q ss_pred CCCCCeeee--C------CeeecCCCcccCCCCCCc
Q 008406 283 QCSGHGHCR--G------GFCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 283 ~Cs~~G~C~--~------G~C~C~~G~~G~~C~~~~ 310 (567)
+|.|+|+|. . ..|.|.+||+|.+|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 699999997 2 279999999999999753
No 95
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=94.28 E-value=0.019 Score=59.52 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=12.6
Q ss_pred CCeEecCCCcccCCCC
Q 008406 185 RAMCFCGEGTKYPNRP 200 (567)
Q Consensus 185 ~g~C~C~~G~~G~~C~ 200 (567)
.+.|.|.+||.|.+|+
T Consensus 271 ~~~C~C~~nt~G~~Ce 286 (375)
T 4aqt_A 271 KLMCNCKHNTYGVDCE 286 (375)
T ss_dssp CEEECCCTTEESTTSC
T ss_pred CeeeeCcCCCcCCCcc
Confidence 3478899999988874
No 96
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=94.25 E-value=0.036 Score=57.81 Aligned_cols=58 Identities=21% Similarity=0.448 Sum_probs=43.6
Q ss_pred ccCCceeecCCCCCccccccCc--cCCCCC-CCCCCCCCE-Ee------------------cCCCeEE-eCCCCcCCCCC
Q 008406 96 AEIGRWLSGCDSVAKEVDLVEM--IGGKSC-KSDCSGQGV-CN------------------HELGQCR-CFHGFRGKGCS 152 (567)
Q Consensus 96 ~~~G~~~~~C~~g~~g~~~~~~--~~~~~C-~~~Cs~~G~-C~------------------~~~G~C~-C~~G~~G~~Ce 152 (567)
.+.|..+..|.+||.+...... ....+| +..|++++. |. ..+|+|. |..+++|..||
T Consensus 293 nT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE 372 (403)
T 2y38_A 293 NTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCE 372 (403)
T ss_dssp TEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSC
T ss_pred cCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCC
Confidence 3579999999999998765432 123578 777988875 83 2368996 99999999998
Q ss_pred c
Q 008406 153 E 153 (567)
Q Consensus 153 ~ 153 (567)
.
T Consensus 373 r 373 (403)
T 2y38_A 373 R 373 (403)
T ss_dssp E
T ss_pred c
Confidence 6
No 97
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.14 E-value=0.012 Score=61.13 Aligned_cols=61 Identities=26% Similarity=0.786 Sum_probs=13.5
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCCCCc----CCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecC
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCG 191 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~ 191 (567)
++| .++|...++|....| .|.|++||+ |..|+. ..+|... ..|...|.+..| .|.|.
T Consensus 4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d--~~eC~~~------------~~C~~~C~~~~g~~~C~C~ 69 (386)
T 3v65_B 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQD--VNECAEE------------GYCSQGCTNSEGAFQCWCE 69 (386)
T ss_dssp --------------------------------------------------------------CCTTEEC-----CCEECC
T ss_pred CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCc--cceeCCc------------CcccCcCCCCCCCCeEEEC
Confidence 567 344333347865455 799999998 889953 4677521 257777877655 89999
Q ss_pred CCcc
Q 008406 192 EGTK 195 (567)
Q Consensus 192 ~G~~ 195 (567)
+||.
T Consensus 70 ~g~~ 73 (386)
T 3v65_B 70 AGYE 73 (386)
T ss_dssp TTEE
T ss_pred CCce
Confidence 9998
No 98
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.85 E-value=0.019 Score=51.88 Aligned_cols=34 Identities=41% Similarity=0.998 Sum_probs=28.9
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (567)
.+| +.+|.++|+|....+ .|.|++||+|..||..
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 567 677999999986544 8999999999999985
No 99
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=93.83 E-value=0.019 Score=43.34 Aligned_cols=31 Identities=32% Similarity=0.927 Sum_probs=25.4
Q ss_pred cc-CCCCCCC--eeee----CCeeecCCCcc-cCCCCCC
Q 008406 279 TC-VNQCSGH--GHCR----GGFCQCDSGWY-GVDCSIP 309 (567)
Q Consensus 279 ~C-~~~Cs~~--G~C~----~G~C~C~~G~~-G~~C~~~ 309 (567)
.| +++|.++ |+|+ ...|.|++||+ |.+|+..
T Consensus 13 ~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 13 ACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp HHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred cCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 44 3789988 8997 34899999999 9999764
No 100
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.80 E-value=0.025 Score=59.12 Aligned_cols=44 Identities=36% Similarity=0.743 Sum_probs=33.6
Q ss_pred ccccccCCCCCC---CcccccccCCccC--CCCCCCeeee----CCeeecCCCcccCC
Q 008406 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGVD 305 (567)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (567)
.+.|.|+ +||. |..|+.. +.|. ..|++ +|+ ...|.|.+||.+..
T Consensus 20 ~y~C~C~-~G~~~~~~~~C~di--deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 20 GYECLCP-DGFQLVAQRRCEDI--DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp SEEEECC-TTEEECSSSCEEEC--CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred CeEEECC-CCCCcCCCCcccCc--hhhhccCCCCC--ccCCCccceeeeccccccccc
Confidence 5799999 9998 8999743 3453 56765 786 35999999998753
No 101
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.77 E-value=0.049 Score=39.34 Aligned_cols=28 Identities=32% Similarity=0.806 Sum_probs=21.9
Q ss_pred CCCCCCCEEecC--CC--eEEeCCCCcCCCCCc
Q 008406 125 SDCSGQGVCNHE--LG--QCRCFHGFRGKGCSE 153 (567)
Q Consensus 125 ~~Cs~~G~C~~~--~G--~C~C~~G~~G~~Ce~ 153 (567)
+-|.+ |+|... .+ .|.|+.||+|++|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 56875 799732 22 699999999999985
No 102
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.58 E-value=0.066 Score=61.14 Aligned_cols=42 Identities=38% Similarity=0.807 Sum_probs=30.6
Q ss_pred ccccccCCCCCC---CcccccccCCccC--CCCCCCeeee----CCeeecCCCccc
Q 008406 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYG 303 (567)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G 303 (567)
.+.|.|+ +||. |..|+.. ..|. ..|+ ..|+ ...|.|.+||.+
T Consensus 332 ~y~C~C~-~Gy~l~~g~~C~di--deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 332 GYECLCP-DGFQLVAQRRCEDI--DECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp SEEEECC-TTCEEETTTEEECC--CCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred CcccCCC-CCCccCCCCccccC--cccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence 5799999 9995 8889742 3454 3454 3676 458999999975
No 103
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.10 E-value=0.037 Score=39.99 Aligned_cols=29 Identities=28% Similarity=0.687 Sum_probs=22.9
Q ss_pred CCCCCCCEEec--CCC--eEEeCCCCcCCCCCcc
Q 008406 125 SDCSGQGVCNH--ELG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 125 ~~Cs~~G~C~~--~~G--~C~C~~G~~G~~Ce~~ 154 (567)
+-|.+ |+|.. +.+ .|.|+.||+|++||..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 45888 89953 223 6999999999999975
No 104
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.10 E-value=0.039 Score=60.22 Aligned_cols=34 Identities=35% Similarity=0.922 Sum_probs=29.2
Q ss_pred CCC-CCCCCCCCEEec-CCC--eEEeC-CCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNH-ELG--QCRCF-HGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~~G--~C~C~-~G~~G~~Ce~~ 154 (567)
++| +++|.|+|+|.. ..+ +|.|. +||+|..||..
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 678 789999999986 333 89999 99999999974
No 105
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.10 E-value=0.038 Score=57.38 Aligned_cols=47 Identities=28% Similarity=0.770 Sum_probs=18.3
Q ss_pred ccccccCCCCCC----CcccccccCCccC--CCCCCCeeee----CCeeecCCCcc----cCCCCC
Q 008406 257 KEECDCKYDGLL----GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWY----GVDCSI 308 (567)
Q Consensus 257 ~g~C~C~~~G~~----G~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~----G~~C~~ 308 (567)
.++|.|+ +||. |..|+.. ..|. ..|++. |. ...|.|.+||. |..|..
T Consensus 23 ~~~C~C~-~G~~l~~~~~~C~d~--~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 23 AVQCTCH-TGYRLTEDGRTCQDV--NECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp --------------------------------CCTTE--EC-----CCEECCTTEEECTTSSCEEE
T ss_pred CcEeECC-CCceECCCCCccCcc--ceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCCCeECC
Confidence 4799999 9998 9999542 3553 578753 86 45899999998 778864
No 106
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=91.63 E-value=0.07 Score=38.52 Aligned_cols=27 Identities=37% Similarity=0.941 Sum_probs=22.3
Q ss_pred CCCCCCeeee------CCeeecCCCcccCCCCCC
Q 008406 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~ 309 (567)
+-|.+ |+|. ...|.|.+||+|.+|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 56777 8995 248999999999999974
No 107
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=91.47 E-value=0.052 Score=48.96 Aligned_cols=28 Identities=36% Similarity=0.926 Sum_probs=24.1
Q ss_pred CCCCCCeeee----CCeeecCCCcccCCCCCC
Q 008406 282 NQCSGHGHCR----GGFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs~~G~C~----~G~C~C~~G~~G~~C~~~ 309 (567)
++|.++|+|. ...|+|.+||+|..|+..
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 5788999997 348999999999999864
No 108
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.41 E-value=0.11 Score=46.93 Aligned_cols=34 Identities=35% Similarity=0.778 Sum_probs=27.9
Q ss_pred CCC-CCCCCCCCEEecCC--CeEEeCCCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNHEL--GQCRCFHGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~--G~C~C~~G~~G~~Ce~~ 154 (567)
..| ++.|+++|+|.... ..|.|.+||.|..|+..
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 456 67899999998433 38999999999999974
No 109
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=91.19 E-value=0.087 Score=57.72 Aligned_cols=34 Identities=29% Similarity=0.836 Sum_probs=28.5
Q ss_pred CCC-CCCCCCCCEEec-C-C-CeEEeC-CCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNH-E-L-GQCRCF-HGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~-~-G~C~C~-~G~~G~~Ce~~ 154 (567)
++| +++|.|+|+|.. . . -.|.|+ +||+|..|+..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 578 789999999984 2 2 279999 99999999974
No 110
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=91.05 E-value=0.077 Score=57.91 Aligned_cols=32 Identities=34% Similarity=0.959 Sum_probs=27.6
Q ss_pred ccCCCCCCCeeeeC-----CeeecC-CCcccCCCCCCc
Q 008406 279 TCVNQCSGHGHCRG-----GFCQCD-SGWYGVDCSIPS 310 (567)
Q Consensus 279 ~C~~~Cs~~G~C~~-----G~C~C~-~G~~G~~C~~~~ 310 (567)
+..++|.|+|+|.+ ..|.|. +||+|.+|+++.
T Consensus 5 C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp GGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCc
Confidence 34589999999975 489999 999999999865
No 111
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.94 E-value=0.13 Score=45.80 Aligned_cols=35 Identities=29% Similarity=0.673 Sum_probs=26.7
Q ss_pred CCCCCCEEecC---CC--eEEeCCCCcCCCCCccccccCC
Q 008406 126 DCSGQGVCNHE---LG--QCRCFHGFRGKGCSERIHFQCN 160 (567)
Q Consensus 126 ~Cs~~G~C~~~---~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (567)
+|.|+|+|... .+ .|.|++||.|..|++....+|.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~ 53 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 53 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCC
Confidence 59999999653 23 7999999999999986333343
No 112
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.89 E-value=0.14 Score=36.97 Aligned_cols=29 Identities=28% Similarity=0.754 Sum_probs=22.5
Q ss_pred CCCCCCCEEecCC----CeEEeCCCCcCCCCCcc
Q 008406 125 SDCSGQGVCNHEL----GQCRCFHGFRGKGCSER 154 (567)
Q Consensus 125 ~~Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~~ 154 (567)
+.|.+ |+|.... -.|.|+.||+|+.|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFH-GTCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccC-CEEeeccCCCCeEEECCCCCcccCCCce
Confidence 34776 5997532 37999999999999974
No 113
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.87 E-value=0.14 Score=58.52 Aligned_cols=57 Identities=18% Similarity=0.290 Sum_probs=32.2
Q ss_pred CCCCCEEecCC----CeEEeCCCCcCCCCCccccccCCCCCCCCCCCCCcccccCCCcccCCCC--eEecCCCccc
Q 008406 127 CSGQGVCNHEL----GQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTKY 196 (567)
Q Consensus 127 Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~~G 196 (567)
|.+ |.|+... +.+.|..|+.+..++. ...+|...+ ..|...|....+ .|.|++||.+
T Consensus 281 C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C-~~~~C~~~~-----------~~C~~~C~~~~~~y~C~C~~Gy~l 343 (791)
T 3m0c_C 281 CHS-GECITLDKVCNMARDCRDWSDEPIKEC-GTNECLDNN-----------GGCSHVCNDLKIGYECLCPDGFQL 343 (791)
T ss_dssp CTT-SCCCCSSCCSCSSCCSSSSCSCCCTTB-SCCSTTTGG-----------GGCSSEEEECSBSEEEECCTTCEE
T ss_pred cCC-CcccccccccCCccccccccCcccccc-ccccccccc-----------cCccccccCCCCCcccCCCCCCcc
Confidence 543 5665433 3456777766544221 123454321 246667876654 8999999963
No 114
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.52 E-value=0.16 Score=36.58 Aligned_cols=26 Identities=31% Similarity=0.939 Sum_probs=21.1
Q ss_pred CCCCCCeeee------CCeeecCCCcccCCCCC
Q 008406 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSI 308 (567)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~ 308 (567)
+-|.+ |+|. ...|.|.+||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 56775 6996 24799999999999986
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.24 E-value=0.12 Score=46.52 Aligned_cols=28 Identities=46% Similarity=1.143 Sum_probs=24.9
Q ss_pred CCCCCCeeee----CCeeecCCCcccCCCCCC
Q 008406 282 NQCSGHGHCR----GGFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs~~G~C~----~G~C~C~~G~~G~~C~~~ 309 (567)
+.|+++|+|. .+.|.|.+||+|..|+..
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 6799999998 569999999999999864
No 116
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.14 E-value=0.17 Score=36.41 Aligned_cols=27 Identities=33% Similarity=0.800 Sum_probs=21.3
Q ss_pred CCCCCCeeee------CCeeecCCCcccCCCCCC
Q 008406 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~ 309 (567)
+-|.++ +|. ...|.|.+||+|.+|+..
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 356664 885 348999999999999874
No 117
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=89.35 E-value=0.17 Score=40.02 Aligned_cols=28 Identities=29% Similarity=0.746 Sum_probs=21.5
Q ss_pred CCCCCCCEEecCC----CeEEeCCCCcCCCCCc
Q 008406 125 SDCSGQGVCNHEL----GQCRCFHGFRGKGCSE 153 (567)
Q Consensus 125 ~~Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~ 153 (567)
+.|.+ |+|.... -.|.|.+||+|..|+.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 45776 5994322 2699999999999986
No 118
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=89.09 E-value=0.14 Score=56.10 Aligned_cols=32 Identities=38% Similarity=1.110 Sum_probs=27.1
Q ss_pred ccCCCCCCCeeeeC-----CeeecC-CCcccCCCCCCc
Q 008406 279 TCVNQCSGHGHCRG-----GFCQCD-SGWYGVDCSIPS 310 (567)
Q Consensus 279 ~C~~~Cs~~G~C~~-----G~C~C~-~G~~G~~C~~~~ 310 (567)
+..++|.|+|+|.+ ..|.|. +||+|..|+++.
T Consensus 4 C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp TTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCch
Confidence 33589999999982 389999 999999999864
No 119
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=88.07 E-value=0.15 Score=45.50 Aligned_cols=34 Identities=35% Similarity=0.998 Sum_probs=27.8
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCCCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (567)
..| +.+|.++|.|....+ .|.|.+||+|+.||+.
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 567 567999999975444 7999999999999973
No 120
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=86.97 E-value=0.23 Score=44.23 Aligned_cols=28 Identities=29% Similarity=0.853 Sum_probs=23.6
Q ss_pred CCCCCeeeeCC-------eeecCCCcccCCCCCCc
Q 008406 283 QCSGHGHCRGG-------FCQCDSGWYGVDCSIPS 310 (567)
Q Consensus 283 ~Cs~~G~C~~G-------~C~C~~G~~G~~C~~~~ 310 (567)
+|.|+|+|+.. .|.|.+||.|..|++.+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccc
Confidence 69999999632 79999999999999753
No 121
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=86.15 E-value=0.18 Score=44.96 Aligned_cols=28 Identities=43% Similarity=1.076 Sum_probs=23.7
Q ss_pred CCCCCCeeeeC----CeeecCCCcccCCCCCC
Q 008406 282 NQCSGHGHCRG----GFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs~~G~C~~----G~C~C~~G~~G~~C~~~ 309 (567)
++|.++|.|.+ ..|.|.+||+|..|++.
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 57888899973 48999999999999863
No 122
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=85.54 E-value=0.35 Score=38.25 Aligned_cols=26 Identities=31% Similarity=0.856 Sum_probs=21.0
Q ss_pred CCCCCCeeee------CCeeecCCCcccCCCCC
Q 008406 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSI 308 (567)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~ 308 (567)
+.|.+ |+|. ...|.|.+||+|.+|+.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 56776 5894 34799999999999985
No 123
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=85.44 E-value=0.4 Score=50.83 Aligned_cols=26 Identities=38% Similarity=1.248 Sum_probs=18.5
Q ss_pred CCCC-CCeeeeCCeeecCCCcccCCCC
Q 008406 282 NQCS-GHGHCRGGFCQCDSGWYGVDCS 307 (567)
Q Consensus 282 ~~Cs-~~G~C~~G~C~C~~G~~G~~C~ 307 (567)
..|+ ++|+..-|.|.|.+||.|..|+
T Consensus 446 ~~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 446 HRCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTTEEEETTEEEECTTC------
T ss_pred cccCCCCeeEeCCceECcCCCCCCCCC
Confidence 4698 8999999999999999999996
No 124
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=82.78 E-value=0.53 Score=50.66 Aligned_cols=33 Identities=33% Similarity=0.840 Sum_probs=28.5
Q ss_pred CCCC-----CCCCCCCEEecCCCeEEeCCCCcCCCCCcc
Q 008406 121 KSCK-----SDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (567)
Q Consensus 121 ~~C~-----~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (567)
.+|+ ..|+++|+||. .+.|.|.+||..++|+..
T Consensus 445 ~~C~~~~~~~~C~~~GVCNn-~~~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 445 STCLSSKEGTICSGNGVCSN-ELKCVCNRHWIGSDCNTY 482 (510)
T ss_dssp CCCCCSSTTCSGGGTEEEBT-TSCEEECTTEESTTSCEE
T ss_pred cCCCCcccccccCCCCeeCC-CCCcCCCCCCCCCCCCCC
Confidence 3784 36999999995 689999999999999985
No 125
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=81.66 E-value=0.68 Score=49.07 Aligned_cols=25 Identities=40% Similarity=1.019 Sum_probs=17.6
Q ss_pred CCC-CCCEEecCCCeEEeCCCCcCCCCC
Q 008406 126 DCS-GQGVCNHELGQCRCFHGFRGKGCS 152 (567)
Q Consensus 126 ~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce 152 (567)
.|+ ++|+.. .|.|.|.+||.|..||
T Consensus 447 ~C~~g~G~~~--CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFE--CGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEE--TTEEEECTTC------
T ss_pred ccCCCCeeEe--CCceECcCCCCCCCCC
Confidence 598 899988 9999999999999996
No 126
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=80.22 E-value=0.91 Score=47.26 Aligned_cols=34 Identities=35% Similarity=0.928 Sum_probs=28.1
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeCC-CCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCFH-GFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~-G~~G~~Ce~~ 154 (567)
..| +++|.++|+|....+ .|.|+. ||+|+.|+..
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 578 778999999975433 899996 9999999974
No 127
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=77.91 E-value=2 Score=35.33 Aligned_cols=66 Identities=23% Similarity=0.456 Sum_probs=44.3
Q ss_pred CCCCCCcccCCCcccccccccccccccccCCCCCCC--cccccccCCccC---CCCCCCeeee---C------CeeecCC
Q 008406 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLG--QFCEVPVSSTCV---NQCSGHGHCR---G------GFCQCDS 299 (567)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~G--~~Ce~~~~~~C~---~~Cs~~G~C~---~------G~C~C~~ 299 (567)
..|..++.|-.... -..+|.|. +||.| ..|....+..|. ..|.-+++|. . -.|.|.+
T Consensus 10 ~~C~~NA~C~r~~~--------g~e~C~C~-~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~ 80 (99)
T 1ob1_C 10 KQCPQNSGCFRHLD--------EREECKCL-LNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTK 80 (99)
T ss_dssp CCCCTTEEEECCTT--------SCCEEEEC-TTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECS
T ss_pred CCCCCCCCeEEcCC--------CCEEEEec-CCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCC
Confidence 45667777854321 15689998 99984 567654345776 3489999996 2 2799999
Q ss_pred Cc-----ccCCCCC
Q 008406 300 GW-----YGVDCSI 308 (567)
Q Consensus 300 G~-----~G~~C~~ 308 (567)
|+ .|..|+.
T Consensus 81 g~~~~~~~gvf~~~ 94 (99)
T 1ob1_C 81 PDSYPLFDGIFCSH 94 (99)
T ss_dssp TTCCEEGGGTEECC
T ss_pred CCcccceeEEEecc
Confidence 95 4666653
No 128
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=77.83 E-value=0.95 Score=48.72 Aligned_cols=30 Identities=37% Similarity=0.861 Sum_probs=26.3
Q ss_pred CCCCCCeeee-CCeeecCCCcccCCCCCCcc
Q 008406 282 NQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (567)
Q Consensus 282 ~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~ 311 (567)
..|++||.|+ .+.|+|.+||.+++|+.+..
T Consensus 454 ~~C~~~GVCNn~~~CHC~~GwaPP~C~~~~~ 484 (510)
T 3g5c_A 454 TICSGNGVCSNELKCVCNRHWIGSDCNTYFP 484 (510)
T ss_dssp CSGGGTEEEBTTSCEEECTTEESTTSCEECC
T ss_pred cccCCCCeeCCCCCcCCCCCCCCCCCCCCCC
Confidence 3699999998 67899999999999998643
No 129
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=74.08 E-value=2.7 Score=34.61 Aligned_cols=64 Identities=23% Similarity=0.658 Sum_probs=38.6
Q ss_pred CCC-CCCCCCCCEEec-CCC--eEEeCCCCcCCC--CCccccccCCCCCCCCCCCCCcccccCC--CcccCC-------C
Q 008406 121 KSC-KSDCSGQGVCNH-ELG--QCRCFHGFRGKG--CSERIHFQCNFPKTPELPYGRWVVSICP--THCDTT-------R 185 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~~G--~C~C~~G~~G~~--Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~-------~ 185 (567)
..| ...|..+..|-. ..| +|+|.+||.|+. |.+....+|...+. .|. +.|... .
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNG-----------GCd~nA~C~~~~~~~~~~k 73 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNG-----------GCDADAKCTEEDSGSNGKK 73 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGG-----------GCCTTEEEECCSCSSSSCC
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCC-----------CcCCCceeEecCCcccCCc
Confidence 456 567888999965 234 799999998754 44422235543211 232 334333 2
Q ss_pred CeEecCCCcc
Q 008406 186 AMCFCGEGTK 195 (567)
Q Consensus 186 g~C~C~~G~~ 195 (567)
-.|.|.+|+.
T Consensus 74 i~C~C~~g~~ 83 (99)
T 1ob1_C 74 ITCECTKPDS 83 (99)
T ss_dssp CEEEECSTTC
T ss_pred eEeEeCCCCc
Confidence 3799988864
No 130
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=72.02 E-value=4.8 Score=33.35 Aligned_cols=62 Identities=23% Similarity=0.607 Sum_probs=38.4
Q ss_pred CCC-CCCCCCCCEEec-CCC--eEEeCCCCcCCC--CCcccccc-CCCCCCCCCCCCCcccccCC--CcccCC---CCeE
Q 008406 121 KSC-KSDCSGQGVCNH-ELG--QCRCFHGFRGKG--CSERIHFQ-CNFPKTPELPYGRWVVSICP--THCDTT---RAMC 188 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~~G--~C~C~~G~~G~~--Ce~~~~~~-C~~~~~~~~~~g~~~~~~C~--g~C~~~---~g~C 188 (567)
..| ...|.-+..|.. ..| +|+|..||+|+. |-+. .+ |...++ -|. +.|... .-.|
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~--Np~C~~nNG-----------GCd~nAeC~~~~~~ki~C 77 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA--SITCEENNG-----------GCAPEAECTMDDKKEVEC 77 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC--CCCTTSGGG-----------GSCTTSEEEECTTSCEEE
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC--CcchhhcCC-----------CcCCCcEeEECCCCEEEe
Confidence 567 456889999965 455 799999998753 4432 33 433221 133 344433 2389
Q ss_pred ecCCCcc
Q 008406 189 FCGEGTK 195 (567)
Q Consensus 189 ~C~~G~~ 195 (567)
.|.++|.
T Consensus 78 ~C~~~~~ 84 (105)
T 1n1i_A 78 KCTKEGS 84 (105)
T ss_dssp ECCSTTC
T ss_pred ECCCCCC
Confidence 9988864
No 131
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=71.31 E-value=0.83 Score=48.68 Aligned_cols=26 Identities=42% Similarity=0.874 Sum_probs=0.0
Q ss_pred CCC-CCCEEecCCCeEEeCCCCcCCCCCc
Q 008406 126 DCS-GQGVCNHELGQCRCFHGFRGKGCSE 153 (567)
Q Consensus 126 ~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce~ 153 (567)
.|+ ++|+.. .|.|.|.+||.|..||.
T Consensus 468 ~C~~g~G~~~--CG~C~C~~G~~G~~CeC 494 (503)
T 3v4v_B 468 HCSDGQGHLQ--CGVCSCAPGRLGRLCES 494 (503)
T ss_dssp -----------------------------
T ss_pred ccCCCCeeEe--CCceECcCCCcCCCCCC
Confidence 476 788877 89999999999999985
No 132
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=69.85 E-value=2.6 Score=43.78 Aligned_cols=29 Identities=34% Similarity=0.809 Sum_probs=24.9
Q ss_pred CCCCCCCeeee----CCeeecCC-CcccCCCCCC
Q 008406 281 VNQCSGHGHCR----GGFCQCDS-GWYGVDCSIP 309 (567)
Q Consensus 281 ~~~Cs~~G~C~----~G~C~C~~-G~~G~~C~~~ 309 (567)
.++|.++|+|. ...|.|.. ||.|..|+.+
T Consensus 190 ~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 190 EDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp TTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred cccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 37899999997 45899996 9999999864
No 133
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=69.19 E-value=4 Score=44.18 Aligned_cols=44 Identities=20% Similarity=0.640 Sum_probs=29.5
Q ss_pred ccccccCCCCCC--CcccccccCCccCC----CCCCCeeee------------CCeeecCCCcccCCC
Q 008406 257 KEECDCKYDGLL--GQFCEVPVSSTCVN----QCSGHGHCR------------GGFCQCDSGWYGVDC 306 (567)
Q Consensus 257 ~g~C~C~~~G~~--G~~Ce~~~~~~C~~----~Cs~~G~C~------------~G~C~C~~G~~G~~C 306 (567)
.|+|.|. +||. |..|+ .|+. ...+.+.|. ...|.|..||.-..-
T Consensus 262 ~G~C~C~-~G~e~~~~~C~-----aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ra~~ 323 (536)
T 3fl7_A 262 IGQCLCQ-AGYEKVEDACQ-----ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQ 323 (536)
T ss_dssp BCCCEEC-TTEEEETTEEE-----ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBCCTT
T ss_pred cCcEecc-CccccCCceee-----ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccccCC
Confidence 6899999 9998 45554 3542 344455554 248999999875543
No 134
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=67.99 E-value=1.1 Score=47.82 Aligned_cols=28 Identities=39% Similarity=0.916 Sum_probs=0.0
Q ss_pred CCCC-CCeeeeCCeeecCCCcccCCCCCC
Q 008406 282 NQCS-GHGHCRGGFCQCDSGWYGVDCSIP 309 (567)
Q Consensus 282 ~~Cs-~~G~C~~G~C~C~~G~~G~~C~~~ 309 (567)
..|+ ++|+..-|.|.|.+||.|..|+-.
T Consensus 467 ~~C~~g~G~~~CG~C~C~~G~~G~~CeC~ 495 (503)
T 3v4v_B 467 PHCSDGQGHLQCGVCSCAPGRLGRLCESR 495 (503)
T ss_dssp -----------------------------
T ss_pred cccCCCCeeEeCCceECcCCCcCCCCCCC
Confidence 3687 899999999999999999999864
No 135
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=67.64 E-value=3.9 Score=33.93 Aligned_cols=66 Identities=30% Similarity=0.523 Sum_probs=44.1
Q ss_pred CCCCCcccCCCcccccccccccccccccCCCCCC--CcccccccCCccC---CCCCCCeeee-CC----eeecCCC----
Q 008406 235 NGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL--GQFCEVPVSSTCV---NQCSGHGHCR-GG----FCQCDSG---- 300 (567)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~g~c~~g~C~C~~~G~~--G~~Ce~~~~~~C~---~~Cs~~G~C~-~G----~C~C~~G---- 300 (567)
.|..++.|..... -..+|.|. .||. |..|-.. +..|. ..|.-+++|. .+ .|.|.+|
T Consensus 17 ~Cp~NA~C~r~~~--------G~e~CrCl-~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~ 86 (105)
T 1n1i_A 17 NVPENAACYRYLD--------GTEEWRCL-LGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEP 86 (105)
T ss_dssp CCCTTEEEEECTT--------SCEEEEEC-TTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCE
T ss_pred CCCCCCCeEECCC--------CCEeEEEE-CCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCcc
Confidence 4566677754211 14589998 9998 5667654 55565 3588889997 22 7999988
Q ss_pred -cccCCCCCCc
Q 008406 301 -WYGVDCSIPS 310 (567)
Q Consensus 301 -~~G~~C~~~~ 310 (567)
|.|..|+..+
T Consensus 87 ~~~GvfC~~ss 97 (105)
T 1n1i_A 87 LFEGVFCSSSS 97 (105)
T ss_dssp EGGGTEECCCC
T ss_pred ccceEEECCCC
Confidence 4577776654
No 136
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=64.70 E-value=3.7 Score=49.19 Aligned_cols=34 Identities=35% Similarity=0.938 Sum_probs=28.1
Q ss_pred CCC-CCCCCCCCEEecCCC--eEEeC-CCCcCCCCCcc
Q 008406 121 KSC-KSDCSGQGVCNHELG--QCRCF-HGFRGKGCSER 154 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~-~G~~G~~Ce~~ 154 (567)
+.| +++|.++|+|...-. .|.|+ +||+|+.|+..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 578 788999999974332 89999 69999999874
No 137
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=63.47 E-value=2.3 Score=41.99 Aligned_cols=30 Identities=27% Similarity=0.795 Sum_probs=23.4
Q ss_pred CCCC---CCCCCCCCEEecCCC--eEEeCCCCcCC
Q 008406 120 GKSC---KSDCSGQGVCNHELG--QCRCFHGFRGK 149 (567)
Q Consensus 120 ~~~C---~~~Cs~~G~C~~~~G--~C~C~~G~~G~ 149 (567)
.++| ...|..++.|....| .|.|++||.|+
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN 39 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC
Confidence 3678 457999999987666 89999999854
No 138
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=59.28 E-value=6.1 Score=27.86 Aligned_cols=22 Identities=27% Similarity=0.874 Sum_probs=17.3
Q ss_pred CCCCCCEEecCCC--eEEeCCCCcCC
Q 008406 126 DCSGQGVCNHELG--QCRCFHGFRGK 149 (567)
Q Consensus 126 ~Cs~~G~C~~~~G--~C~C~~G~~G~ 149 (567)
.|. ++|....| .|.|++||++.
T Consensus 21 ~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 21 QCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp TTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CCC--CEeECCCCCeEEECCCCCeEC
Confidence 475 48987666 79999999864
No 139
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=56.87 E-value=2.5 Score=25.88 Aligned_cols=20 Identities=40% Similarity=1.202 Sum_probs=15.6
Q ss_pred cCCCCCCCeeeeCCeeecCC
Q 008406 280 CVNQCSGHGHCRGGFCQCDS 299 (567)
Q Consensus 280 C~~~Cs~~G~C~~G~C~C~~ 299 (567)
|..+|..+|.|.++.|+|.+
T Consensus 5 C~~~C~~~gKCmNgkC~Cy~ 24 (26)
T 1jlz_A 5 CRKKCKGSGKCINGRCKCYX 24 (26)
T ss_dssp HHHHTTSSEEEETTEEEEC-
T ss_pred hhhhhCCCCEEeCCCceeec
Confidence 44556788999999999964
No 140
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=53.22 E-value=6.8 Score=46.87 Aligned_cols=33 Identities=30% Similarity=0.933 Sum_probs=27.6
Q ss_pred CCC-CCCCCCCCEEecCC--CeEEeC-CCCcCCCCCc
Q 008406 121 KSC-KSDCSGQGVCNHEL--GQCRCF-HGFRGKGCSE 153 (567)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~--G~C~C~-~G~~G~~Ce~ 153 (567)
..| +++|.++|+|.... -.|.|+ .||.|..|+.
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 578 88999999997532 279999 7999999985
No 141
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=50.10 E-value=11 Score=24.04 Aligned_cols=15 Identities=33% Similarity=0.842 Sum_probs=12.2
Q ss_pred CCCeeeeCCeeecCC
Q 008406 285 SGHGHCRGGFCQCDS 299 (567)
Q Consensus 285 s~~G~C~~G~C~C~~ 299 (567)
..+|.|++|.|+|.+
T Consensus 17 ~~~gKC~NgkC~Cy~ 31 (31)
T 1cmr_A 17 TSKGWCDHRGCICES 31 (31)
T ss_dssp CCCCCEETTEECCCC
T ss_pred CCCCceeCCCceeCC
Confidence 467899999999953
No 142
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=47.14 E-value=6.9 Score=42.32 Aligned_cols=65 Identities=25% Similarity=0.406 Sum_probs=36.4
Q ss_pred CCCCCCEEecCCCeEEeCCCCcCCCCCccccccCCCCCCC-CCCCCCcccccCCCcccCC---CCeEecCCCcc
Q 008406 126 DCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTP-ELPYGRWVVSICPTHCDTT---RAMCFCGEGTK 195 (567)
Q Consensus 126 ~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~-~~~~g~~~~~~C~g~C~~~---~g~C~C~~G~~ 195 (567)
.|+..|.+..-.|.|.|.+||.+..+. +..|..+... ..-.+.| ..|+.+.... ...|.|..||.
T Consensus 251 ~C~~dG~w~~p~G~C~C~~G~e~~~~~---C~aC~~g~~k~~~~~~~C--~~CP~~S~s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 251 HCAVDGEWLVPIGQCLCQAGYEKVEDA---CQACSPGFFKFEASESPC--LECPEHTLPSPEGATSCECEEGFF 319 (536)
T ss_dssp EECTTSCBCCCBCCCEECTTEEEETTE---EEECCTTEECCSCCSSCC--EECCSSEECCCTTCSSCEECTTCB
T ss_pred EEcCCCCEecccCcEeccCccccCCce---eeecCCCCCcccCCCCcc--ccCCCCCCCCCCCccEEEEecccc
Confidence 388888887667999999999843322 1235432110 0001112 2466444322 23788988875
No 143
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=45.94 E-value=9.2 Score=29.25 Aligned_cols=28 Identities=21% Similarity=0.495 Sum_probs=16.9
Q ss_pred CCCC---CCCCCCCEEecCCC--eEEe-CCCCcC
Q 008406 121 KSCK---SDCSGQGVCNHELG--QCRC-FHGFRG 148 (567)
Q Consensus 121 ~~C~---~~Cs~~G~C~~~~G--~C~C-~~G~~G 148 (567)
++|. ..|.++++|....| .|.| ..||.+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 5662 35777778876666 5653 356654
No 144
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=44.92 E-value=9.8 Score=27.36 Aligned_cols=26 Identities=38% Similarity=1.049 Sum_probs=18.4
Q ss_pred CCCCCCEEecCCC--eEEeCCCCc----CCCCCc
Q 008406 126 DCSGQGVCNHELG--QCRCFHGFR----GKGCSE 153 (567)
Q Consensus 126 ~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~ 153 (567)
.|+ ..|....| .|.|++||. |..|+.
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CcC--cEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 365 37876666 799999996 455654
No 145
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=43.72 E-value=8.2 Score=34.56 Aligned_cols=37 Identities=27% Similarity=0.652 Sum_probs=23.6
Q ss_pred CCCccccccCccCCCCCC-CC-----CCCCCEEecCCC--eEEeCCCCc
Q 008406 107 SVAKEVDLVEMIGGKSCK-SD-----CSGQGVCNHELG--QCRCFHGFR 147 (567)
Q Consensus 107 ~g~~g~~~~~~~~~~~C~-~~-----Cs~~G~C~~~~G--~C~C~~G~~ 147 (567)
.||.+.++..++ ++|. .. |++ .|....| .|.|++||+
T Consensus 113 ~Gf~~~~~~~di--~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAEDI--DECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEEC--CTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeecccc--CcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 455555544333 6772 22 765 6876566 799999998
No 146
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=43.52 E-value=4.3 Score=26.01 Aligned_cols=18 Identities=50% Similarity=1.521 Sum_probs=15.1
Q ss_pred cCCCCCCCeeeeCCeeec
Q 008406 280 CVNQCSGHGHCRGGFCQC 297 (567)
Q Consensus 280 C~~~Cs~~G~C~~G~C~C 297 (567)
|..+|..+|.|.+|+|+|
T Consensus 13 C~~~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 13 CSRKCPGNPPCRNGFCAC 30 (31)
T ss_dssp HHHHSSSCCCEETTEESC
T ss_pred HHhhhccCCcccCCCcee
Confidence 555678889999999998
No 147
>2ktc_A Potassium channel toxin alpha-KTX 9.4; BTK-2, scorpion toxin, KV1.1, disulfide bond, ionic channel inhibitor, neurotoxin; NMR {Mesobuthus tamulus}
Probab=41.47 E-value=7.9 Score=24.69 Aligned_cols=23 Identities=30% Similarity=0.855 Sum_probs=18.1
Q ss_pred CCCCCCCC---CCEEecCCCeEEeCCCC
Q 008406 122 SCKSDCSG---QGVCNHELGQCRCFHGF 146 (567)
Q Consensus 122 ~C~~~Cs~---~G~C~~~~G~C~C~~G~ 146 (567)
+||..|.+ ..+|. .+.|.|.+|-
T Consensus 7 eCP~HCk~k~A~~tCd--n~~C~Cn~~~ 32 (34)
T 2ktc_A 7 ECPMHCKGKMAKPTCE--NEVCKCNIGK 32 (34)
T ss_dssp HHHHTCCTTCCCEEEE--TTEEEECTTC
T ss_pred cChhhhcccccccccc--CCeEecccCC
Confidence 56777875 46898 8999999884
No 148
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=39.00 E-value=10 Score=37.42 Aligned_cols=26 Identities=42% Similarity=1.016 Sum_probs=21.1
Q ss_pred CCCCCCeeee----CCeeecCCCcc--cCCCC
Q 008406 282 NQCSGHGHCR----GGFCQCDSGWY--GVDCS 307 (567)
Q Consensus 282 ~~Cs~~G~C~----~G~C~C~~G~~--G~~C~ 307 (567)
.+|..++.|+ ...|.|++||. |..|.
T Consensus 13 ~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 13 HQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp GGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred CCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 5799899997 34999999999 55674
No 149
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=37.11 E-value=8.7 Score=25.28 Aligned_cols=16 Identities=19% Similarity=0.679 Sum_probs=12.9
Q ss_pred CCCeeeeCCeeecCCC
Q 008406 285 SGHGHCRGGFCQCDSG 300 (567)
Q Consensus 285 s~~G~C~~G~C~C~~G 300 (567)
..+|.|.+|.|.|.++
T Consensus 20 ~~~gKCmNgkC~Cy~~ 35 (35)
T 1wz5_A 20 XPNSKCINRMCKCYGX 35 (35)
T ss_dssp SSCCEEETTEEECSCC
T ss_pred CCCcceeCCcceecCC
Confidence 4678999999999653
No 150
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=39.95 E-value=8.7 Score=22.66 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=8.2
Q ss_pred CeeeeCCeeec
Q 008406 287 HGHCRGGFCQC 297 (567)
Q Consensus 287 ~G~C~~G~C~C 297 (567)
-|+|++|.|+|
T Consensus 16 igtcvdgkckc 26 (27)
T 2lix_A 16 IGTCVDGKCKC 26 (27)
Confidence 47788888877
No 151
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=30.91 E-value=14 Score=24.62 Aligned_cols=15 Identities=27% Similarity=0.616 Sum_probs=11.6
Q ss_pred CCCeeeeCCeeecCC
Q 008406 285 SGHGHCRGGFCQCDS 299 (567)
Q Consensus 285 s~~G~C~~G~C~C~~ 299 (567)
..+|.|.+|.|.|.+
T Consensus 23 ~~~gKCmNgkC~Cyp 37 (37)
T 1bah_A 23 TSRGKCMNKKXRCYS 37 (37)
T ss_dssp CSCCCBCSSSBCCCC
T ss_pred CCCcceeCCCCCcCC
Confidence 467789999999853
No 152
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=28.90 E-value=14 Score=33.04 Aligned_cols=35 Identities=26% Similarity=0.826 Sum_probs=21.5
Q ss_pred CCCCCcccccccCCccCC------CCCCCeeee----CCeeecCCCcc
Q 008406 265 DGLLGQFCEVPVSSTCVN------QCSGHGHCR----GGFCQCDSGWY 302 (567)
Q Consensus 265 ~G~~G~~Ce~~~~~~C~~------~Cs~~G~C~----~G~C~C~~G~~ 302 (567)
.||.+..+...+ ..|.. .|.+ .|. ...|.|.+||.
T Consensus 113 ~Gf~~~~~~~di-~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAEDI-DECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEEC-CTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeecccc-CcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 566666654432 23431 1654 586 34899999998
No 153
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=26.57 E-value=33 Score=39.52 Aligned_cols=32 Identities=25% Similarity=0.627 Sum_probs=25.6
Q ss_pred CCCCCCCCCCEEecCCC--eEEeCCCCcCCCCCcc
Q 008406 122 SCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (567)
Q Consensus 122 ~C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (567)
.|. +|.++|.+....+ .|.|++||.|+.|+..
T Consensus 501 ~C~-PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 501 QCA-PCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp GSC-CBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred cCC-CCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 443 6999999985444 5789999999999985
No 154
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=23.74 E-value=66 Score=35.35 Aligned_cols=33 Identities=30% Similarity=0.815 Sum_probs=24.7
Q ss_pred ccCCCCCCCeeeeCCeeecCCCcccCCCCCCccc
Q 008406 279 TCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (567)
Q Consensus 279 ~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~~~~~ 312 (567)
.|.+.|...+.|..+.+-|..++ |..|..|...
T Consensus 123 ~c~~~c~~d~~c~g~~~Cc~n~c-G~~C~~P~~~ 155 (680)
T 1zlg_A 123 ACVESCEVDNECSGVKKCCSNGC-GHTCQVPKTL 155 (680)
T ss_pred hhhhhccccccCCCccccccccc-ccccccccee
Confidence 46677888888876655588886 8899987654
No 155
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=22.37 E-value=37 Score=29.57 Aligned_cols=25 Identities=32% Similarity=0.842 Sum_probs=17.5
Q ss_pred CCCCC----CCCCCCEEecCCC--eEEeCCCCc
Q 008406 121 KSCKS----DCSGQGVCNHELG--QCRCFHGFR 147 (567)
Q Consensus 121 ~~C~~----~Cs~~G~C~~~~G--~C~C~~G~~ 147 (567)
++|.. .|. +.|....| .|.|.+||+
T Consensus 118 ~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 118 NECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp CTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred cccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence 57732 464 47865455 799999998
No 156
>1tsk_A TS KAPA; scorpion, toxin, potassium channel, neurotoxin; NMR {Tityus serrulatus} SCOP: g.3.7.2
Probab=21.83 E-value=20 Score=23.57 Aligned_cols=13 Identities=38% Similarity=1.191 Sum_probs=11.0
Q ss_pred CCCeeeeCCeeec
Q 008406 285 SGHGHCRGGFCQC 297 (567)
Q Consensus 285 s~~G~C~~G~C~C 297 (567)
..+|.|.+|.|+|
T Consensus 23 ~~~gKCmNgkC~C 35 (35)
T 1tsk_A 23 KATGKCTNGRCDC 35 (35)
T ss_dssp SSCCEEETTEEEC
T ss_pred CCCCceeCCCccC
Confidence 5678999999987
No 157
>1big_A Toxin BMTX1; scorpion, neurotoxin, structure, large conductance potassium channel, voltage gated potassium channel; HET: PCA; NMR {Mesobuthus martensii} SCOP: g.3.7.2 PDB: 2bmt_A*
Probab=21.44 E-value=46 Score=22.08 Aligned_cols=15 Identities=40% Similarity=0.984 Sum_probs=12.0
Q ss_pred CCCeeeeCCeeecCC
Q 008406 285 SGHGHCRGGFCQCDS 299 (567)
Q Consensus 285 s~~G~C~~G~C~C~~ 299 (567)
..+|.|.+|.|.|.+
T Consensus 23 ~~~gKCmNgkC~Cyp 37 (37)
T 1big_A 23 KPNGKCMNGKCRCYS 37 (37)
T ss_dssp CCCCEEETTEEECCC
T ss_pred CCCCceeCCCcccCC
Confidence 467899999999953
No 158
>1wmt_A ISTX; neurotoxin, potassium channel blocker, solution structure, alpha-K toxin family, scorpion toxin; NMR {Synthetic} SCOP: g.3.7.2
Probab=20.53 E-value=52 Score=22.35 Aligned_cols=16 Identities=19% Similarity=0.700 Sum_probs=12.8
Q ss_pred CCCeeeeCCeeecCCC
Q 008406 285 SGHGHCRGGFCQCDSG 300 (567)
Q Consensus 285 s~~G~C~~G~C~C~~G 300 (567)
..+|.|.+|.|.|.++
T Consensus 23 ~~~gKCmNgkC~Cy~~ 38 (41)
T 1wmt_A 23 CARAKCMNRHCNCYNN 38 (41)
T ss_dssp CCCCEEETTEEECCCC
T ss_pred CCCCceeCCCcccCCC
Confidence 4578999999999654
No 159
>1hp2_A Tityustoxin K alpha; K+ channel, scorpion toxin, alpha-K toxin,; NMR {Tityus serrulatus} SCOP: g.3.7.2
Probab=20.11 E-value=48 Score=21.98 Aligned_cols=15 Identities=33% Similarity=0.946 Sum_probs=12.0
Q ss_pred CCCeeeeCCeeecCC
Q 008406 285 SGHGHCRGGFCQCDS 299 (567)
Q Consensus 285 s~~G~C~~G~C~C~~ 299 (567)
..+|.|.+|.|.|.+
T Consensus 23 ~~~gKC~NgkC~Cyp 37 (37)
T 1hp2_A 23 KAAGKCMNGKCKCYP 37 (37)
T ss_dssp SCCEEEETTEEEECC
T ss_pred CCCCceeCCCcccCC
Confidence 567899999999853
Done!