Query 008422
Match_columns 566
No_of_seqs 208 out of 1718
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 03:11:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008422.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008422hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 1.4E-99 5E-104 827.7 54.6 509 23-566 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 5.7E-98 2E-102 808.0 49.8 464 22-548 64-544 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 2.5E-94 8.6E-99 771.1 48.6 457 25-547 3-470 (499)
4 3t6v_A Laccase; beta barrel, o 100.0 6.6E-94 2.3E-98 768.0 46.9 456 26-547 5-470 (495)
5 1v10_A Laccase; multicopper bl 100.0 5.1E-94 1.7E-98 777.3 45.6 477 21-566 19-508 (521)
6 1zpu_A Iron transport multicop 100.0 1.1E-93 3.9E-98 775.3 47.8 478 24-566 1-500 (534)
7 2q9o_A Laccase-1; multicopper 100.0 2.9E-92 9.8E-97 769.1 50.5 487 21-566 29-540 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 1.5E-90 5.2E-95 747.7 43.5 470 26-566 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 2.4E-83 8.2E-88 681.2 39.0 405 22-547 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 1.3E-82 4.4E-87 676.3 32.0 406 24-549 17-442 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 2.7E-80 9.2E-85 669.4 37.9 422 24-550 35-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 3.1E-79 1.1E-83 661.0 38.6 427 24-548 24-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 1.2E-78 4.1E-83 645.6 39.5 417 21-547 46-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 1.6E-78 5.5E-83 643.8 32.4 385 47-547 28-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 5.9E-78 2E-82 669.3 36.2 466 23-549 30-592 (612)
16 3od3_A Blue copper oxidase CUE 100.0 8.4E-77 2.9E-81 631.0 34.3 426 24-546 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.5E-74 1.2E-78 625.8 44.4 441 23-549 30-592 (612)
18 3g5w_A Multicopper oxidase typ 100.0 2.9E-54 1E-58 437.6 30.3 272 24-310 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 9.2E-53 3.1E-57 487.9 38.0 278 8-311 5-359 (1065)
20 2zwn_A Two-domain type laccase 100.0 1.8E-52 6E-57 429.2 33.5 272 24-310 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 2.4E-54 8.2E-59 482.0 12.6 241 29-291 50-318 (742)
22 2dv6_A Nitrite reductase; elec 100.0 1.9E-48 6.3E-53 415.8 30.7 400 23-551 26-436 (447)
23 1kbv_A ANIA, major outer membr 100.0 4.8E-48 1.6E-52 394.3 29.5 262 21-310 34-309 (327)
24 3gdc_A Multicopper oxidase; be 100.0 7.4E-48 2.5E-52 385.9 29.9 239 23-291 32-277 (288)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 1.2E-46 4.2E-51 436.7 17.9 400 41-550 615-1060(1065)
26 2zoo_A Probable nitrite reduct 100.0 1.1E-44 3.8E-49 385.8 28.3 265 21-311 24-300 (442)
27 3kw8_A Laccase, putative coppe 100.0 1.2E-44 4E-49 360.4 25.1 239 21-309 3-266 (276)
28 3tas_A Small laccase, multi-co 100.0 1.2E-44 4.2E-49 366.7 24.6 239 21-309 9-272 (313)
29 3t9w_A Small laccase, multi-co 100.0 1.7E-44 5.8E-49 362.7 24.5 243 18-309 22-288 (299)
30 1mzy_A Copper-containing nitri 100.0 1.2E-43 4.2E-48 363.4 29.5 266 21-310 28-320 (333)
31 1oe1_A Dissimilatory copper-co 100.0 1.7E-42 5.8E-47 355.5 27.4 267 22-310 29-320 (336)
32 2bw4_A Copper-containing nitri 100.0 2E-42 6.7E-47 355.7 26.5 268 21-310 34-326 (340)
33 1sdd_B Coagulation factor V; c 100.0 2.9E-40 1E-44 367.1 26.9 253 22-291 3-316 (647)
34 3cg8_A Laccase; oxidoreductase 100.0 4.7E-40 1.6E-44 336.5 25.9 237 22-309 45-307 (343)
35 2dv6_A Nitrite reductase; elec 100.0 6.3E-39 2.2E-43 342.1 31.7 260 23-310 161-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 8.1E-42 2.8E-46 345.1 8.3 216 45-290 50-288 (306)
37 2r7e_B Coagulation factor VIII 100.0 1.8E-40 6.3E-45 370.6 9.5 250 22-289 130-443 (770)
38 2r7e_A Coagulation factor VIII 100.0 5.4E-37 1.8E-41 342.3 5.1 218 52-290 448-699 (742)
39 3gdc_A Multicopper oxidase; be 100.0 9.2E-29 3.2E-33 247.4 17.7 233 188-547 54-287 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 3.2E-28 1.1E-32 248.9 16.4 216 207-549 75-307 (343)
41 3g5w_A Multicopper oxidase typ 100.0 1.9E-27 6.6E-32 240.7 19.9 247 189-549 23-277 (318)
42 2zwn_A Two-domain type laccase 100.0 1.9E-27 6.5E-32 243.4 19.0 244 188-548 23-277 (339)
43 3t9w_A Small laccase, multi-co 99.9 1.8E-27 6.1E-32 238.9 14.8 217 207-550 56-289 (299)
44 3kw8_A Laccase, putative coppe 99.9 3.2E-27 1.1E-31 234.7 15.9 223 207-559 34-273 (276)
45 3tas_A Small laccase, multi-co 99.9 4.2E-26 1.4E-30 230.7 17.2 216 207-549 40-272 (313)
46 1sdd_A Coagulation factor V; c 99.9 2.8E-24 9.5E-29 216.8 4.0 237 191-549 52-301 (306)
47 1sdd_B Coagulation factor V; c 99.9 8.4E-22 2.9E-26 218.7 17.4 238 207-548 67-327 (647)
48 2bw4_A Copper-containing nitri 99.9 6.9E-21 2.4E-25 195.2 20.6 94 442-551 231-327 (340)
49 1kbv_A ANIA, major outer membr 99.9 2.1E-20 7E-25 190.2 20.7 249 189-550 59-309 (327)
50 1mzy_A Copper-containing nitri 99.8 4.9E-19 1.7E-23 180.8 23.0 93 442-550 225-320 (333)
51 2r7e_B Coagulation factor VIII 99.8 3E-21 1E-25 215.7 4.6 88 442-547 368-455 (770)
52 1oe1_A Dissimilatory copper-co 99.8 5.6E-18 1.9E-22 173.2 22.1 94 442-551 225-321 (336)
53 2zoo_A Probable nitrite reduct 99.8 7.3E-18 2.5E-22 179.0 20.1 251 188-551 48-300 (442)
54 2uxt_A Protein SUFI, SUFI; oxi 99.8 1.9E-17 6.7E-22 175.4 23.1 238 25-308 152-441 (451)
55 2xu9_A Laccase; oxidoreductase 99.8 1.6E-17 5.3E-22 175.9 20.6 235 25-290 146-428 (439)
56 1v10_A Laccase; multicopper bl 99.7 1.4E-15 4.9E-20 164.0 22.8 240 44-291 191-480 (521)
57 1hfu_A Laccase 1; oxidoreducta 99.7 2.6E-15 8.9E-20 161.4 24.4 261 27-291 143-459 (503)
58 3zx1_A Oxidoreductase, putativ 99.7 2.5E-15 8.4E-20 159.5 19.9 242 26-290 181-469 (481)
59 1zpu_A Iron transport multicop 99.6 3.5E-14 1.2E-18 153.4 23.6 228 44-291 167-470 (534)
60 3od3_A Blue copper oxidase CUE 99.6 1.3E-14 4.4E-19 154.0 19.8 254 26-290 151-478 (488)
61 3t6v_A Laccase; beta barrel, o 99.6 6E-14 2E-18 149.8 24.7 245 43-290 167-459 (495)
62 1aoz_A Ascorbate oxidase; oxid 99.6 3.6E-14 1.2E-18 154.3 20.6 226 57-291 205-514 (552)
63 3pxl_A Laccase; 4-copper prote 99.6 8.4E-14 2.9E-18 148.7 22.4 245 43-290 165-459 (499)
64 2q9o_A Laccase-1; multicopper 99.6 2.6E-13 9E-18 147.5 25.1 246 44-291 195-510 (559)
65 2g23_A PHS, phenoxazinone synt 99.6 1.4E-13 4.7E-18 149.9 22.6 237 43-291 253-580 (612)
66 3aw5_A Multicopper oxidase; be 99.6 6.1E-14 2.1E-18 148.4 18.4 231 26-290 138-437 (448)
67 3cvb_A Plastocyanin; cupredoxi 99.5 4E-15 1.4E-19 125.1 4.5 89 52-144 15-105 (105)
68 2wsd_A Spore coat protein A; o 99.5 2.7E-13 9.4E-18 146.0 17.8 232 43-307 229-509 (513)
69 3abg_A Bilirubin oxidase; clea 99.4 1.3E-12 4.5E-17 140.9 16.5 260 26-308 172-475 (534)
70 1iby_A Nitrosocyanin; RED copp 99.4 9.2E-13 3.2E-17 111.9 11.0 105 26-144 2-112 (112)
71 3sqr_A Laccase; multicopper ox 99.4 4.6E-11 1.6E-15 129.2 24.2 241 44-290 225-532 (580)
72 2cal_A Rusticyanin; iron respi 99.3 3.6E-12 1.2E-16 114.2 9.4 98 41-143 47-154 (154)
73 3gyr_A PHS, phenoxazinone synt 99.3 9.1E-11 3.1E-15 129.6 20.2 94 190-291 460-580 (612)
74 1fwx_A Nitrous oxide reductase 99.2 2.6E-11 8.7E-16 130.1 11.4 96 40-146 497-594 (595)
75 2ov0_A Amicyanin; beta-sandwic 99.1 1.6E-10 5.5E-15 96.7 9.4 79 50-143 27-105 (105)
76 2aan_A Auracyanin A; cupredoxi 99.1 1.1E-10 3.7E-15 103.1 7.5 96 442-547 35-139 (139)
77 3cvb_A Plastocyanin; cupredoxi 99.1 2.1E-10 7.2E-15 95.9 7.7 85 442-547 19-104 (105)
78 2gim_A Plastocyanin; beta shee 98.9 2.1E-09 7.1E-14 90.0 7.4 82 56-143 20-105 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 8.6E-09 3E-13 90.8 10.0 90 53-143 32-139 (139)
80 4hci_A Cupredoxin 1; structura 98.7 3E-08 1E-12 82.0 8.8 79 50-143 22-100 (100)
81 2gim_A Plastocyanin; beta shee 98.7 2.2E-08 7.6E-13 83.7 8.1 85 442-547 20-105 (106)
82 2plt_A Plastocyanin; electron 98.7 7E-08 2.4E-12 79.3 8.6 77 56-143 18-98 (98)
83 1qhq_A Protein (auracyanin); e 98.6 7E-08 2.4E-12 85.0 8.9 99 442-547 33-139 (140)
84 1qhq_A Protein (auracyanin); e 98.6 1.4E-07 4.8E-12 83.1 10.8 91 53-144 30-140 (140)
85 3c75_A Amicyanin; copper prote 98.6 8.8E-08 3E-12 83.3 7.6 79 50-143 54-132 (132)
86 1pcs_A Plastocyanin; electron 98.5 2.3E-07 7.8E-12 76.2 8.7 80 56-143 19-98 (98)
87 1bxv_A Plastocyanin; copper pr 98.5 2.2E-07 7.4E-12 75.2 7.6 73 56-143 19-91 (91)
88 1pcs_A Plastocyanin; electron 98.5 3.6E-07 1.2E-11 75.0 9.0 80 442-547 19-98 (98)
89 2plt_A Plastocyanin; electron 98.5 3.4E-07 1.2E-11 75.2 8.2 81 442-547 18-98 (98)
90 1bxv_A Plastocyanin; copper pr 98.5 4.7E-07 1.6E-11 73.2 8.4 73 442-547 19-91 (91)
91 1b3i_A PETE protein, protein ( 98.4 3E-07 1E-11 75.3 6.9 77 56-143 19-97 (97)
92 1plc_A Plastocyanin; electron 98.4 6.1E-07 2.1E-11 73.8 8.7 77 56-143 17-99 (99)
93 1kdj_A Plastocyanin; electron 98.4 5.5E-07 1.9E-11 74.5 8.3 82 56-143 17-102 (102)
94 3tu6_A Pseudoazurin (blue copp 98.4 5E-07 1.7E-11 77.6 7.9 76 56-146 23-98 (127)
95 1byp_A Protein (plastocyanin); 98.4 7.7E-07 2.6E-11 73.2 8.8 77 56-143 17-99 (99)
96 3erx_A Pseudoazurin; copper pr 98.4 7.5E-07 2.6E-11 76.1 8.9 75 56-145 21-95 (123)
97 1b3i_A PETE protein, protein ( 98.4 2.7E-07 9.2E-12 75.6 4.9 79 442-547 19-97 (97)
98 1iby_A Nitrosocyanin; RED copp 98.3 2E-06 7E-11 72.4 9.9 75 442-548 38-112 (112)
99 3ef4_A Pseudoazurin, blue copp 98.3 2.3E-06 7.8E-11 73.0 9.6 75 56-145 22-96 (124)
100 4hci_A Cupredoxin 1; structura 98.3 2.8E-06 9.6E-11 69.9 9.2 73 442-547 28-100 (100)
101 1byp_A Protein (plastocyanin); 98.2 2.2E-06 7.6E-11 70.3 7.5 83 442-547 17-99 (99)
102 1cuo_A Protein (azurin ISO-2); 98.2 3.5E-06 1.2E-10 72.6 8.4 89 56-144 18-129 (129)
103 1id2_A Amicyanin; beta barrel, 98.2 6E-06 2.1E-10 68.7 9.6 73 56-143 34-106 (106)
104 1iuz_A Plastocyanin; electron 98.2 7.5E-06 2.6E-10 67.0 9.8 77 56-143 18-98 (98)
105 3ay2_A Lipid modified azurin p 98.2 7.1E-06 2.4E-10 73.6 9.9 92 52-144 54-167 (167)
106 1paz_A Pseudoazurin precursor; 98.1 8.4E-06 2.9E-10 69.6 9.0 75 56-145 21-95 (123)
107 1kdj_A Plastocyanin; electron 98.1 5.5E-06 1.9E-10 68.4 7.1 86 442-547 17-102 (102)
108 1pmy_A Pseudoazurin; electron 98.1 9.1E-06 3.1E-10 69.4 7.8 75 56-145 21-95 (123)
109 2ccw_A Azurin II, AZN-2; elect 98.0 2E-05 6.8E-10 67.8 9.2 87 56-143 18-128 (129)
110 3sbq_A Nitrous-oxide reductase 98.0 3E-05 1E-09 81.6 11.2 87 45-145 547-638 (638)
111 2iaa_C Azurin; quinoprotein, t 98.0 3.4E-05 1.1E-09 66.2 9.5 87 56-143 17-127 (128)
112 1plc_A Plastocyanin; electron 97.9 1.6E-05 5.5E-10 65.1 6.6 83 442-547 17-99 (99)
113 2ux6_A Pseudoazurin; type-1 co 97.9 2.8E-05 9.5E-10 66.3 8.1 73 56-145 21-93 (122)
114 1nwp_A Azurin; electron transp 97.9 4.8E-05 1.6E-09 65.3 9.4 87 56-143 18-128 (128)
115 2cal_A Rusticyanin; iron respi 97.8 7.3E-05 2.5E-09 66.5 9.9 85 442-547 61-154 (154)
116 1fwx_A Nitrous oxide reductase 97.8 6.7E-05 2.3E-09 80.6 10.9 77 442-548 513-592 (595)
117 2ov0_A Amicyanin; beta-sandwic 97.6 0.00023 7.8E-09 58.9 8.7 73 442-547 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.2 0.0022 7.7E-08 54.1 9.7 88 53-143 15-125 (125)
119 3erx_A Pseudoazurin; copper pr 97.0 0.0018 6.2E-08 55.0 8.0 75 442-549 21-95 (123)
120 3tu6_A Pseudoazurin (blue copp 97.0 0.0012 4.3E-08 56.3 6.8 76 442-550 23-98 (127)
121 1iuz_A Plastocyanin; electron 97.0 0.0026 8.7E-08 51.7 8.4 81 442-547 18-98 (98)
122 3ef4_A Pseudoazurin, blue copp 96.9 0.0022 7.5E-08 54.4 7.6 75 442-549 22-96 (124)
123 2cua_A Protein (CUA); CUA cent 96.6 0.0096 3.3E-07 51.3 9.4 74 56-144 60-135 (135)
124 1id2_A Amicyanin; beta barrel, 96.5 0.01 3.5E-07 48.9 8.7 73 442-547 34-106 (106)
125 3c75_A Amicyanin; copper prote 96.3 0.014 4.9E-07 50.1 8.7 73 442-547 60-132 (132)
126 1paz_A Pseudoazurin precursor; 96.3 0.013 4.5E-07 49.6 8.1 36 509-548 59-94 (123)
127 3s8f_B Cytochrome C oxidase su 96.1 0.027 9.1E-07 50.3 9.6 74 56-144 93-168 (168)
128 3sbq_A Nitrous-oxide reductase 96.1 0.026 8.8E-07 59.7 10.9 79 442-548 558-637 (638)
129 1pmy_A Pseudoazurin; electron 96.1 0.015 5.2E-07 49.2 7.5 37 509-549 59-95 (123)
130 2ux6_A Pseudoazurin; type-1 co 95.1 0.063 2.1E-06 45.3 7.8 73 442-549 21-93 (122)
131 1cuo_A Protein (azurin ISO-2); 95.1 0.11 3.7E-06 44.3 9.1 96 442-547 18-128 (129)
132 2cua_A Protein (CUA); CUA cent 95.0 0.11 3.6E-06 44.7 9.1 71 443-547 61-134 (135)
133 3ay2_A Lipid modified azurin p 94.8 0.067 2.3E-06 47.7 7.2 96 442-547 58-166 (167)
134 2ccw_A Azurin II, AZN-2; elect 93.5 0.42 1.4E-05 40.6 9.4 96 442-547 18-128 (129)
135 2iaa_C Azurin; quinoprotein, t 92.7 0.32 1.1E-05 41.2 7.6 96 442-547 17-127 (128)
136 3s8f_B Cytochrome C oxidase su 92.4 0.65 2.2E-05 41.2 9.4 73 443-547 94-167 (168)
137 1nwp_A Azurin; electron transp 90.0 1 3.5E-05 38.1 7.9 95 442-546 18-127 (128)
138 3fsa_A Azurin; copper, cupredo 88.8 2 6.9E-05 36.0 8.6 94 442-546 18-124 (125)
139 3isy_A Bsupi, intracellular pr 87.5 3.6 0.00012 34.1 9.3 76 215-291 16-106 (120)
140 1cyx_A CYOA; electron transpor 66.8 12 0.0004 34.2 6.6 61 210-289 42-102 (205)
141 3isy_A Bsupi, intracellular pr 65.5 56 0.0019 26.9 11.3 74 45-129 23-101 (120)
142 1cyx_A CYOA; electron transpor 65.3 19 0.00064 32.8 7.7 73 56-143 41-115 (205)
143 2x3c_A Toxic extracellular end 61.2 16 0.00056 36.2 7.1 16 102-117 95-110 (343)
144 2r39_A FIXG-related protein; s 53.1 35 0.0012 27.8 6.8 47 217-273 33-81 (118)
145 2f1e_A Protein APAG; APAG prot 49.0 19 0.00064 30.1 4.4 46 67-115 34-87 (127)
146 2gsm_B Cytochrome C oxidase su 48.6 50 0.0017 31.3 7.9 75 56-145 171-247 (262)
147 1xq4_A Protein APAG; all beta 46.8 20 0.00068 30.4 4.3 48 67-115 38-91 (139)
148 3hb3_B Cytochrome C oxidase su 46.7 59 0.002 31.4 8.2 76 56-146 189-266 (298)
149 1xvs_A Protein APAG; MCSG APC2 46.7 18 0.00063 30.1 4.0 46 67-115 33-86 (126)
150 1tza_A APAG protein, SOR45; st 43.6 18 0.00061 30.5 3.5 46 67-115 33-86 (134)
151 3hb3_B Cytochrome C oxidase su 43.2 90 0.0031 30.1 8.9 76 441-548 188-264 (298)
152 2gsm_B Cytochrome C oxidase su 36.3 1.3E+02 0.0046 28.2 8.8 76 441-548 170-246 (262)
153 2xzz_A Protein-glutamine gamma 35.9 39 0.0013 26.9 4.2 53 65-123 23-79 (102)
154 1v54_B Cytochrome C oxidase po 35.4 82 0.0028 29.1 7.0 75 56-145 140-216 (227)
155 2c34_A ICP, inhibitor of cyste 34.5 1.7E+02 0.0058 23.7 8.1 63 55-122 14-88 (116)
156 1nep_A EPV20, BNPC2, epididyma 34.3 69 0.0024 26.6 5.8 63 55-117 25-95 (130)
157 4ubp_B Protein (urease (chain 34.3 68 0.0023 26.4 5.3 59 57-115 18-88 (126)
158 4ac7_B Urease subunit beta; hy 34.3 68 0.0023 26.4 5.3 59 57-115 18-88 (126)
159 1xwv_A DER F II; beta sheets, 32.4 1.1E+02 0.0038 25.2 6.8 61 55-116 24-92 (129)
160 2cio_B Inhibitor of cysteine p 29.1 2.1E+02 0.0073 23.3 7.8 30 55-84 12-41 (121)
161 2h7w_A Chagasin; beta-strands, 29.0 2.1E+02 0.0072 23.7 7.9 65 55-123 32-104 (131)
162 1fft_B Ubiquinol oxidase; elec 25.1 46 0.0016 32.4 3.5 57 210-285 152-208 (315)
163 1x9u_A Umecyanin; cupredoxin, 24.0 82 0.0028 25.6 4.3 33 517-549 73-106 (116)
164 1xvs_A Protein APAG; MCSG APC2 23.8 42 0.0014 27.9 2.5 49 218-269 31-83 (126)
165 3rfr_A PMOB; membrane, oxidore 23.7 1.5E+02 0.0052 29.5 6.7 50 65-116 301-366 (419)
166 2p9r_A Alpha-2-M, alpha-2-macr 23.0 2.6E+02 0.0089 21.5 7.2 69 212-286 12-84 (102)
167 2f1e_A Protein APAG; APAG prot 22.7 60 0.0021 27.0 3.2 49 218-269 32-84 (127)
168 1v54_B Cytochrome C oxidase po 22.4 2.2E+02 0.0074 26.1 7.4 75 441-547 139-214 (227)
169 1tza_A APAG protein, SOR45; st 21.7 46 0.0016 28.0 2.3 49 218-269 31-83 (134)
170 3kmh_A D-lyxose isomerase; cup 21.4 1.4E+02 0.0047 27.7 5.6 19 256-280 171-189 (246)
171 1yew_A Particulate methane mon 20.7 1.5E+02 0.005 29.3 5.9 52 65-116 267-334 (382)
172 2wtp_A ORF131 protein, CZCE; m 20.4 43 0.0015 27.9 1.8 22 211-232 73-94 (131)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=1.4e-99 Score=827.70 Aligned_cols=509 Identities=29% Similarity=0.534 Sum_probs=404.5
Q ss_pred CceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCCCCCC
Q 008422 23 AAIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPSMITQ 101 (566)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~~vtq 101 (566)
+++|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|.|+ ++++|||||+++.++.|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 46899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHHHHh
Q 008422 102 CPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQAQA 180 (566)
Q Consensus 102 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 180 (566)
|+|+||++|+|+|++ +++||||||||...+.. ||+|+|||++++....++ ++|+|++|+++||++....++......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 99999999999988876 999999999986554444 356899999999999987766543322
Q ss_pred cC-CCCCCCceEEEcCCCCCCCCC-------------CCC-----CeeEEEEECCcEEEEEEEecccCceEEEEEcCCeE
Q 008422 181 TG-GGPNISDAYTINGRPGDLYPC-------------SQN-----QTYTLKVETGKTYLLRIINAALNNQLFFKIANHNF 241 (566)
Q Consensus 181 ~g-~~~~~~~~~liNG~~g~~~~~-------------~~~-----~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 241 (566)
.. .....++.++|||+. .++| +.. ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~--~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRG--QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBC--CSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCcc--ccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 111346799999994 2333 221 12379999999999999999999999999999999
Q ss_pred EEEEecCCCcCcEEeeEEEECCCceEEEEEee-CCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCC--C-CCCC
Q 008422 242 TVVAIDACYTEPYVTDVVVIAPGQTTDVLLKA-DQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTA--N-PLMP 317 (566)
Q Consensus 242 ~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~-~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~--~-~~~p 317 (566)
+|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|||++.... +. .......|+|+|+++... + ...|
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~---~~~~~~~ail~y~~~~~~~~p~~~~p 312 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH---PNTPPGLTLLNYLPNSVSKLPTSPPP 312 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC---CCSCCEEEEEEETTSCTTSCCSSCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC---CCCccEEEEEEECCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 456899999999865 22 123457899999876531 1 1223
Q ss_pred CCCCCCCCCcccccccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcch
Q 008422 318 VLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSL 397 (566)
Q Consensus 318 ~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l 397 (566)
..+.+++...... ..++.+..+. +...|..+++++.+.+..+.. .....|++||++|..|. .|+
T Consensus 313 ~~p~~~~~~~~~~--~~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------------~~~~~w~iNg~s~~~p~-~P~ 376 (552)
T 1aoz_A 313 QTPAWDDFDRSKN--FTYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------------NGYVKWAINDVSLALPP-TPY 376 (552)
T ss_dssp CCCCTTCHHHHHH--HHTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------------TTEEEEEETTEEECCCS-SCH
T ss_pred CCCcccccccccc--ccccccccCC-CCCCCCCCcEEEEEEEeeccC------------CCeEEEEECCCccCCCC-CCH
Confidence 3344433222111 1233332221 233456678888777654321 22568999999999886 788
Q ss_pred hhhhhcccCCcccCCCCCCCC-cccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccC---CCCCceeeeC
Q 008422 398 LQAFFFNVGGIFTPDFPDNPP-LIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVV---LENHPMHVHG 473 (566)
Q Consensus 398 l~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~---~~~HP~HlHG 473 (566)
|.+.+.+..|.|..+++..++ ..|+.+.. ..+...+.++.++.++.|++|+|+|+|.+... .+.|||||||
T Consensus 377 L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHG 451 (552)
T 1aoz_A 377 LGAMKYNLLHAFDQNPPPEVFPEDYDIDTP-----PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHG 451 (552)
T ss_dssp HHHHHTTCTTSSCCSCCCSCCCTTCCTTSC-----CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETT
T ss_pred HHHHhhcCccccccCCCccccccccccccc-----cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcC
Confidence 888777777777655543322 12332211 00112345667899999999999999976432 4679999999
Q ss_pred CcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCC
Q 008422 474 FDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGPTPS 553 (566)
Q Consensus 474 ~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~~~~ 553 (566)
|+|+||++|.|.|++ .....+|+.+|+|||||.||++||++|||+|||||.|+|||||+||++.|||++|.|..
T Consensus 452 h~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~----- 525 (552)
T 1aoz_A 452 HDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGV----- 525 (552)
T ss_dssp CCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECG-----
T ss_pred CceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCc-----
Confidence 999999999899987 45567899999999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCCCCCCC
Q 008422 554 TRLPPPPADLPQC 566 (566)
Q Consensus 554 ~~~~~~p~~~~~c 566 (566)
++++++|.++++|
T Consensus 526 ~~~~~~P~~~~~C 538 (552)
T 1aoz_A 526 EKVGRIPTKALAC 538 (552)
T ss_dssp GGCCCCCHHHHSS
T ss_pred hhhccCCcchhhh
Confidence 2577889999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=5.7e-98 Score=807.95 Aligned_cols=464 Identities=31% Similarity=0.501 Sum_probs=374.3
Q ss_pred CCceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCCCCC
Q 008422 22 SAAIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPSMIT 100 (566)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~~vt 100 (566)
.+++|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|.++ ++|+|||||+++.+++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 467899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred CCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCCCCCCCCCcce-eEEeceecccCHHHHHHHH
Q 008422 101 QCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHKYPFPKPNKEV-PIILGEWWNADIIDVAKQA 178 (566)
Q Consensus 101 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 178 (566)
||+|+||++|+|+|++ .++||||||||...++. ||+|+|||+++.+. .+|.|. +|+++||++....++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 89999999999988887 99999999987643 467787 9999999999988877655
Q ss_pred HhcCCCCCCCceEEEcCCCCCCCCCCC---------CCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCC
Q 008422 179 QATGGGPNISDAYTINGRPGDLYPCSQ---------NQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDAC 249 (566)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~g~~~~~~~---------~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~ 249 (566)
...+ +..++.++|||+ + .+.|+. ...+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~~--~~~~d~~liNG~-~-~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLGA--PPALENTLMNGT-N-TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTSC--CCCBSEEEETTB-C-CCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hccC--CCCCceEEECCc-c-cCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 4432 467889999999 4 345542 24689999999999999999999999999999999999999999
Q ss_pred CcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccc
Q 008422 250 YTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAH 329 (566)
Q Consensus 250 ~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~ 329 (566)
+++|+.+++|.|+|||||||+|++++.+|+|||++.....|.. ........|||+|.++... .|..+.+.......
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~-~~~~~~~~aiL~Y~~~~~~---~P~~~~~~~~~~~~ 369 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCST-NNEAANATGILRYDSSSIA---NPTSVGTTPRGTCE 369 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSC-BTTGGGCEEEEESSTTCCC---CCCCCCCCCCCCSC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCc-cCCCCceEEEEEECCCCCC---CCCCCCCCccchhh
Confidence 9999999999999999999999999888999999998765532 1233467999999875432 23333332221111
Q ss_pred c-cccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCc
Q 008422 330 R-FYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGI 408 (566)
Q Consensus 330 ~-~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~ 408 (566)
. ....|.++. +..+|...+.++.+.+. .+..+.|++||.+|..+...|+|...+.+.
T Consensus 370 ~~~~~~L~P~~----~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~--- 427 (580)
T 3sqr_A 370 DEPVASLVPHL----ALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPTTLKIFNNE--- 427 (580)
T ss_dssp CSCGGGCCBSS----CCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCHHHHHHTTC---
T ss_pred cccccccccCC----CCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCchhhhhcCC---
Confidence 1 012333322 22234334444433331 234678999999997643356555444321
Q ss_pred ccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEc----cCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCC
Q 008422 409 FTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPL----KFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFG 484 (566)
Q Consensus 409 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g 484 (566)
..++ ...+++.+ +.|++|||+|+|.+. ..+.||||||||+|+||++|.|
T Consensus 428 --~~~~------------------------~~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~~g~G 480 (580)
T 3sqr_A 428 --TIFP------------------------TEYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVAQETD 480 (580)
T ss_dssp --CCCC------------------------GGGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEEEESS
T ss_pred --ccCC------------------------CCcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEecCCC
Confidence 1111 01234444 469999999999762 1379999999999999999999
Q ss_pred CCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008422 485 NFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVEN 548 (566)
Q Consensus 485 ~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~ 548 (566)
.|++......+|+.||++||||.||++||++|||++||||.|+|||||+||++.||+++|.++.
T Consensus 481 ~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~ 544 (580)
T 3sqr_A 481 VFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ 544 (580)
T ss_dssp CCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG
T ss_pred ccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH
Confidence 9998766678999999999999999999999999999999999999999999999999999754
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=2.5e-94 Score=771.13 Aligned_cols=457 Identities=29% Similarity=0.500 Sum_probs=359.5
Q ss_pred eEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-----ceeEEEeCccccCCCCCCCCCCC
Q 008422 25 IVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPY-----NLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 25 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
..+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|.|++ +|+|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 4689999999999999999999999999999999999999999999999984 79999999999999999999999
Q ss_pred CCCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCC-CCCCCCCcceeEEeceecccCHHHHHHH
Q 008422 100 TQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHK-YPFPKPNKEVPIILGEWWNADIIDVAKQ 177 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 177 (566)
|||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+.. .+++..++|++|+++||++.....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 99999999999999999788999999999988876 999999999776421 122223467899999999876422
Q ss_pred HHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEee
Q 008422 178 AQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTD 257 (566)
Q Consensus 178 ~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 257 (566)
.+..+..++.++|||+ +++..+.....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~-~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTB-CCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCC-CcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 2334457899999999 655555555778999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccc
Q 008422 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTG 337 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 337 (566)
+|.|+|||||||+|++++.+|+|||++.....+. .+......|+|+|+++.... |..+..... ......+|++
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~---p~~~~~~~~--~~~~~~~L~p 307 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV--GFDGGINSAILRYDGAPAVE---PTTNQTTSV--KPLNEVDLHP 307 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSC---CCCCCCCCS--SBCCGGGCCB
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEeCCCCCCC---CCCCCCCCC--cccccccccc
Confidence 9999999999999999987899999998754433 12223357999998764321 211111111 1111234555
Q ss_pred CCCCCCCC-CCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCC
Q 008422 338 LKGGPQWV-PVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDN 416 (566)
Q Consensus 338 l~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~ 416 (566)
+.....|. ..+..+|+++.+.+.+. + ..|+|||++|..|. .|+|...+.+ .+..
T Consensus 308 ~~~~~~p~~~~~~~~d~~~~l~~~~~--------------~--~~w~iNg~s~~~~~-~P~L~~~~~g---~~~~----- 362 (499)
T 3pxl_A 308 LVSTPVPGAPSSGGVDKAINMAFNFN--------------G--SNFFINGASFVPPT-VPVLLQILSG---AQTA----- 362 (499)
T ss_dssp SSCCCCSSCSSTTCSSEEEECCEEEC--------------S--SCEEETTBCCCCCS-SCHHHHHHTT---CCST-----
T ss_pred cccccCCCcccCCCCcEEEEEEEEec--------------C--cEEEEcCEecCCCC-CchhhhhhcC---Cccc-----
Confidence 54322221 12345677766554431 1 26899999998876 4544333322 1110
Q ss_pred CCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCccccccccc
Q 008422 417 PPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFN 496 (566)
Q Consensus 417 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n 496 (566)
........++.++.|++|||+|+|.+....+.||||||||+|+||+.+. ...+|
T Consensus 363 ------------------~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~~~n 416 (499)
T 3pxl_A 363 ------------------QDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------STVYN 416 (499)
T ss_dssp ------------------TTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CCCCC
T ss_pred ------------------cccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------Ccccc
Confidence 0011234688999999999999953223457899999999999998642 34678
Q ss_pred CCCCCcceeEEeCC---CcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 497 LVNPQRRNTIAVPV---GGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 497 ~~~p~~rDTv~vp~---~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
+.+|++||||.||+ ++|++|||+|||||.|+|||||+||++.||+++|.+.
T Consensus 417 ~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (499)
T 3pxl_A 417 YDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470 (499)
T ss_dssp SSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES
T ss_pred cCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC
Confidence 89999999999997 9999999999999999999999999999999999754
No 4
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=6.6e-94 Score=768.01 Aligned_cols=456 Identities=30% Similarity=0.502 Sum_probs=356.1
Q ss_pred EEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-----ceeEEEeCccccCCCCCCCCCCCC
Q 008422 26 VEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPY-----NLTIHWHGIFQLLSAWADGPSMIT 100 (566)
Q Consensus 26 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~vt 100 (566)
.+|+|+|++..+++||+++.+++|||++|||+||+++||+|+|+|+|.|++ +|+|||||+++..++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 689999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred CCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCC-CCCCCCCcceeEEeceecccCHHHHHHHH
Q 008422 101 QCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHK-YPFPKPNKEVPIILGEWWNADIIDVAKQA 178 (566)
Q Consensus 101 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (566)
||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+.. .+++..++|++|+++||++.....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999788999999999988876 999999999776432 1222234678999999999875321
Q ss_pred HhcCCCCCCCceEEEcCCCCCCCCCC-CCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEee
Q 008422 179 QATGGGPNISDAYTINGRPGDLYPCS-QNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTD 257 (566)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~g~~~~~~-~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 257 (566)
.+..+..++.++|||+ +++..+. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 161 --~~~~p~~~d~~liNG~-g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 237 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGL-GRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVD 237 (495)
T ss_dssp --CSSSCCCCSEEEETTB-CCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred --ccCCCCCCcEEEECCc-CcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEee
Confidence 2333457899999999 6544333 34568999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccc
Q 008422 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTG 337 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 337 (566)
+|.|+|||||||+|++++++|+|||++.....+. .+......|+|+|+++.... |..+.... ........+|++
T Consensus 238 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~---p~~~~~~~-~~~~~~~~~L~p 311 (495)
T 3t6v_A 238 EIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE--GFDGGINSAILRYDGATTAD---PVTVASTV-HTKCLIETDLHP 311 (495)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSC---CCCCCCSS-CSSBCCGGGCCB
T ss_pred eEEEcCceEEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEECCCCCCC---CCCCCCCC-Cccccccccccc
Confidence 9999999999999999987899999998754433 12222357999998764321 11111110 000111234555
Q ss_pred CCCCCCCC-CCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCC
Q 008422 338 LKGGPQWV-PVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDN 416 (566)
Q Consensus 338 l~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~ 416 (566)
+.....|. ..+..+|+++.+.+.+. + ..|+|||++|..+. .|+|...+.+ .+...
T Consensus 312 ~~~~~~p~~~~~~~~d~~~~l~~~~~--------------~--~~w~iNg~s~~~~~-~P~L~~~~~g---~~~~~---- 367 (495)
T 3t6v_A 312 LSRNGVPGNPHQGGADCNLNLSLGFA--------------C--GNFVINGVSFTPPT-VPVLLQICSG---ANTAA---- 367 (495)
T ss_dssp SSCCCCSSCSSTTCSSEEEECCEEEE--------------T--TEEEETTBCCCCCS-SCHHHHHHTT---CCSST----
T ss_pred cccccCCCccCCCCCcEEEEEEEEec--------------C--cEEEEcCEecCCCC-CcchhhhhcC---CcCcc----
Confidence 43222221 12345676665554321 1 27999999998776 4544333322 11100
Q ss_pred CCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCccccccccc
Q 008422 417 PPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFN 496 (566)
Q Consensus 417 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n 496 (566)
.......++.++.|++|||+|+|. ...+.||||||||+|+||+.+. ...+|
T Consensus 368 -------------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~~~~n 418 (495)
T 3t6v_A 368 -------------------DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------NSTSN 418 (495)
T ss_dssp -------------------TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------CCCCC
T ss_pred -------------------cccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------CCCcc
Confidence 011234688999999999999842 2347999999999999998642 34678
Q ss_pred CCCCCcceeEEeCC-CcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 497 LVNPQRRNTIAVPV-GGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 497 ~~~p~~rDTv~vp~-~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
+.+|++||||.|++ ++|++|||+|||||.|+|||||+||++.||+++|.+.
T Consensus 419 ~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (495)
T 3t6v_A 419 YDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAED 470 (495)
T ss_dssp SSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEET
T ss_pred cCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEC
Confidence 89999999999997 8999999999999999999999999999999999754
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=5.1e-94 Score=777.31 Aligned_cols=477 Identities=27% Similarity=0.472 Sum_probs=363.2
Q ss_pred cCCceEEEEEEEEEEEeccCce-eEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-----CceeEEEeCccccCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGRLCR-QQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-----YNLTIHWHGIFQLLSAWAD 94 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~D 94 (566)
..+..++|+|++++..+++||+ ++.+|+|||++|||+|++++||+|+|+|+|.|+ ++|+|||||+++.+++|+|
T Consensus 19 ~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D 98 (521)
T 1v10_A 19 SLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD 98 (521)
T ss_dssp ---CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS
T ss_pred hcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccC
Confidence 4567789999999999999999 999999999999999999999999999999998 9999999999999999999
Q ss_pred CCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCC-CCCCCCCCcceeEEeceecccCHH
Q 008422 95 GPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGH-KYPFPKPNKEVPIILGEWWNADII 172 (566)
Q Consensus 95 G~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~ 172 (566)
|++++|||+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+. +.+++..++|++|+++||+++...
T Consensus 99 Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~ 178 (521)
T 1v10_A 99 GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLST 178 (521)
T ss_dssp CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC
T ss_pred CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHH
Confidence 9999999999999999999997689999999999998877 99999999987542 122222346999999999998765
Q ss_pred HHHHHHHhcCCCCCCCceEEEcCCCCCCCCCC--CCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCC
Q 008422 173 DVAKQAQATGGGPNISDAYTINGRPGDLYPCS--QNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACY 250 (566)
Q Consensus 173 ~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~ 250 (566)
++... .+.....++.++|||+ + .+.|. ....+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 179 ~~~~~---~~~~~~~~d~~liNG~-~-~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~ 253 (521)
T 1v10_A 179 VLFPN---PNKAPPAPDTTLINGL-G-RNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVS 253 (521)
T ss_dssp ----------CCCSCCSEEEETTB-C-CCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEE
T ss_pred HHhhc---cCCCCCCCCEEEECCc-c-cCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCcc
Confidence 54321 1222356889999999 4 24554 2345899999999999999999999999999999999999999999
Q ss_pred cCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccc
Q 008422 251 TEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHR 330 (566)
Q Consensus 251 ~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~ 330 (566)
++|+.++++.|+|||||||+|++++.+|+|+|++.....+. .+......|+|+|++..... |..+.. +.. ..
T Consensus 254 ~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~--~~~~~~~~ail~y~~~~~~~---p~~~~~-~~~--~~ 325 (521)
T 1v10_A 254 HQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN--GFTGGINSAIFRYQGAAVAE---PTTSQN-SGT--AL 325 (521)
T ss_dssp EEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTCCSCC---CCCCCC-CSC--BC
T ss_pred ccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc--cCCCCceeEEEEECCCCCCC---CCCCCC-ccc--cc
Confidence 99999999999999999999999977899999998764322 12222346999998764321 111111 000 00
Q ss_pred cccccccCCCCCCCC-CCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcc
Q 008422 331 FYSNLTGLKGGPQWV-PVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIF 409 (566)
Q Consensus 331 ~~~~l~~l~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~ 409 (566)
...+|.++.....+. ..+...+.++.+...+ .+....|+|||++|..+. .++|.+.+.+ .+
T Consensus 326 ~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~~~~-~P~l~~~~~g---~~ 387 (521)
T 1v10_A 326 NEANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFIPPT-VPVLLQILSG---VT 387 (521)
T ss_dssp CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCS-SCHHHHHHHT---CC
T ss_pred chhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCcccCCC-CchhhhhhcC---Cc
Confidence 012344432222121 1122334444332221 122347999999998776 3554444332 11
Q ss_pred cCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcc
Q 008422 410 TPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAA 489 (566)
Q Consensus 410 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~ 489 (566)
. + .....++.++.++.|++|||+++| . +.||||||||+|+||+++.+
T Consensus 388 ~-------~----------------~~~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~~~~~----- 434 (521)
T 1v10_A 388 N-------P----------------NDLLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVRTPGS----- 434 (521)
T ss_dssp C-------G----------------GGSSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEECTTC-----
T ss_pred c-------c----------------ccCCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEecCCC-----
Confidence 0 0 001224578899999999999999 2 78999999999999998754
Q ss_pred cccccccCCCCCcceeEEe-CCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008422 490 RDRQKFNLVNPQRRNTIAV-PVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGPTPSTRLPPPP-ADLPQC 566 (566)
Q Consensus 490 ~~~~~~n~~~p~~rDTv~v-p~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 566 (566)
..+|+.+|+|||||.| |+++|++|||+|||||.|+|||||+||++.|||++|.|.+.. ..++.++| .+.+.|
T Consensus 435 ---~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 508 (521)
T 1v10_A 435 ---SVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDDLC 508 (521)
T ss_dssp ---SCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHTHH
T ss_pred ---CccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhhhc
Confidence 2467899999999999 899999999999999999999999999999999999986532 33444444 456777
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-93 Score=775.31 Aligned_cols=478 Identities=26% Similarity=0.400 Sum_probs=368.9
Q ss_pred ceEEEEEEEEEEEeccCc-eeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCCCCCC
Q 008422 24 AIVEHTFHVKNLTIGRLC-RQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPSMITQ 101 (566)
Q Consensus 24 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~~vtq 101 (566)
++|+|+|+|++..+++|| +++.+|+|||++|||+|++++||+|+|+|+|.|+ ++|+|||||+++..++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 479999999999999999 8999999999999999999999999999999998 99999999999999999999999999
Q ss_pred CcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHHHHh
Q 008422 102 CPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQAQA 180 (566)
Q Consensus 102 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 180 (566)
|+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+ |+ .+|+|++|+++||++....++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 999999999999999559999999999998877 9999999998864 22 568899999999999998877655432
Q ss_pred c---CCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEee
Q 008422 181 T---GGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTD 257 (566)
Q Consensus 181 ~---g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 257 (566)
. .+....++.+||||+ ..+.++|++|++|||||||+|+.+.+.|+|+||+|+|||+||.+++|+.++
T Consensus 157 ~~~~~g~~~~~d~~liNG~----------~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNT----------MNLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTB----------SSCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCC----------CceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 123356889999999 347899999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEeeCCC-CceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccc
Q 008422 258 VVVIAPGQTTDVLLKADQP-VGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSN 334 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~-~G~y~~~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 334 (566)
+|.|+|||||||+|++++. .|+|+|++.....+.. +........|+|+|.++...+.+ +....+.. + .. ...
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~-~~~~~~~~-~-~~--~~~ 301 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQ-NYVDSIDN-F-LD--DFY 301 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCC-CCCSCSSC-S-CC--GGG
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCC-Cccccccc-c-cc--ccc
Confidence 9999999999999999854 4789999886543221 11223457899999875432110 00011100 0 00 012
Q ss_pred cccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCC
Q 008422 335 LTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFP 414 (566)
Q Consensus 335 l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~ 414 (566)
++++. +...+..+++++.+.+.+... ..+...|.+||++|..|. .|+|...+.. +.+.
T Consensus 302 l~p~~----~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~iNg~s~~~~~-~P~L~~~~~~--~~~~---- 359 (534)
T 1zpu_A 302 LQPYE----KEAIYGEPDHVITVDVVMDNL-----------KNGVNYAFFNNITYTAPK-VPTLMTVLSS--GDQA---- 359 (534)
T ss_dssp CCBSS----CCCCCCSCSEEEEEEEEEEEC-----------TTSCEEEEETTBCCCCCS-SCHHHHHTTS--GGGT----
T ss_pred ceeCC----CCCCCCCCCeEEEEEEEeecc-----------CCceeEEEECCCcccCCC-CCceeeeccc--Cccc----
Confidence 33222 112334567777776654321 122346899999998886 4443333221 1110
Q ss_pred CCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCC----------
Q 008422 415 DNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFG---------- 484 (566)
Q Consensus 415 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g---------- 484 (566)
. .+.. ...++.++.++.|++|+|+|+|.+. +.||||||||+|+||+++.+
T Consensus 360 ~-~~~~----------------~~~~~~~~~~~~g~~v~ivi~N~~~---~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~ 419 (534)
T 1zpu_A 360 N-NSEI----------------YGSNTHTFILEKDEIVEIVLNNQDT---GTHPFHLHGHAFQTIQRDRTYDDALGEVPH 419 (534)
T ss_dssp T-CGGG----------------GCSSSCEEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEECCCCCGGGTCCCC
T ss_pred C-CCcc----------------cCCCceEEEeCCCCEEEEEEeCCCC---CCCCeEecCCceEEEeecCCccccccCccc
Confidence 0 0110 1123577899999999999999753 79999999999999999864
Q ss_pred CCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCC---CCCCCC
Q 008422 485 NFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGPTPSTR---LPPPPA 561 (566)
Q Consensus 485 ~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~~~~~~---~~~~p~ 561 (566)
.|++.. ... .+.+|+|||||.||+++|++|||+|||||.|+|||||+||++.|||++|.|.+. ..++ ++.|+.
T Consensus 420 ~~~~~~-~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~--~~~~~~~~~~p~~ 495 (534)
T 1zpu_A 420 SFDPDN-HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF--GIQDAHSQQLSEN 495 (534)
T ss_dssp CCBTTB-CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH--HHHHCGGGSCCHH
T ss_pred ccCccc-ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc--ccccccccCCChh
Confidence 444321 112 247899999999999999999999999999999999999999999999998643 2333 444444
Q ss_pred CCCCC
Q 008422 562 DLPQC 566 (566)
Q Consensus 562 ~~~~c 566 (566)
+.+.|
T Consensus 496 ~~~~C 500 (534)
T 1zpu_A 496 HLEVC 500 (534)
T ss_dssp HHHHH
T ss_pred Hhhhh
Confidence 44555
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=2.9e-92 Score=769.11 Aligned_cols=487 Identities=26% Similarity=0.414 Sum_probs=370.1
Q ss_pred cCCceEEEEEEEEEEE--eccCcee-EEEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCceeEEEeCccccCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLT--IGRLCRQ-QTITAVNGSLPGPTIRVHEGDTLIVHVFNKS-PYNLTIHWHGIFQLLSAWADGP 96 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~~~DG~ 96 (566)
..+++++|+|++++.. +.++|+. +.+|+|||++|||+|++++||+|+|+|+|.| +++|+|||||+++.+++|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3577899999999999 8899999 9999999999999999999999999999999 6899999999999998999999
Q ss_pred CCCCCCcCCC-CCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCCCCCCCCCcce-eEEeceecccCHHH
Q 008422 97 SMITQCPITP-GNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHKYPFPKPNKEV-PIILGEWWNADIID 173 (566)
Q Consensus 97 ~~vtq~~i~P-G~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 173 (566)
|+++||+|+| |++|+|+|++ .++||||||||...+.. ||+|+|||+++... .+|.|. +|+++||++....+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 88999999999988776 99999999987643 467777 99999999998877
Q ss_pred HHHHHHhcCCCCCCCceEEEcCCCCCCCCCC-CCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcC
Q 008422 174 VAKQAQATGGGPNISDAYTINGRPGDLYPCS-QNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTE 252 (566)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~-~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~ 252 (566)
+..... +.....++.++|||+.. ..|. .+..+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~--~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAV--NPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCB--CTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCccc--cCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 654332 22345688999999953 2343 224678999999999999999999999999999999999999999999
Q ss_pred cEEeeEEEECCCceEEEEEeeCCCCceeEEEeee--cccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccc
Q 008422 253 PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARA--YASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHR 330 (566)
Q Consensus 253 p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~--~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~ 330 (566)
|+.++++.|+|||||||+|++++.+|+|+|++.. ...+.. .......|+|+|.++... +|..+.+........
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~--~~~~~~~ail~y~~~~~~---~P~~~~~~~~~~~~~ 333 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG--SLNPHPAAIFHYAGAPGG---LPTDEGTPPVDHQCL 333 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCC--BSSSCCEEEEEETTSCCS---CCCCCCCCCCCCTTC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCC--CCCCceeEEEEECCCCCC---CCCCCCCcCCCcccc
Confidence 9999999999999999999999778999999987 333321 122345899999876432 222211110000000
Q ss_pred cccccccCCCCCCCCC-CCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcc
Q 008422 331 FYSNLTGLKGGPQWVP-VPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIF 409 (566)
Q Consensus 331 ~~~~l~~l~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~ 409 (566)
-...+.+......+.. .....+.++.+.... .......|+|||++|..+...|+|...+.+.
T Consensus 334 ~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~---- 396 (559)
T 2q9o_A 334 DTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL-------------TGTPLFVWKVNGSDINVDWGKPIIDYILTGN---- 396 (559)
T ss_dssp CCSCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-------------SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC----
T ss_pred cccccccCCCCCCCCcccccceeEEEEEEeec-------------CCCceEEEEECCEecccCCCCCcHhHhhcCC----
Confidence 0012222211110100 011112333333221 0233568999999997654356655544331
Q ss_pred cCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccC-CCEEEEEEEeCCc-cCCCCCceeeeCCcEEEEEeCC----
Q 008422 410 TPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKF-NSTVEMILQNTAL-VVLENHPMHVHGFDFHVLAQGF---- 483 (566)
Q Consensus 410 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~v~~v~~n~~~-~~~~~HP~HlHG~~F~Vl~~g~---- 483 (566)
..++ .+.+++.++. +++++|+++|... ...+.||||||||+|+||+++.
T Consensus 397 -~~~~------------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~~~ 451 (559)
T 2q9o_A 397 -TSYP------------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPA 451 (559)
T ss_dssp -CCCC------------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCCCT
T ss_pred -ccCC------------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEeccccccc
Confidence 0111 1235566655 5778888888531 0147999999999999999987
Q ss_pred -----CCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCCCCC
Q 008422 484 -----GNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGPTPSTRLPP 558 (566)
Q Consensus 484 -----g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~ 558 (566)
|.|++......+|+.+|+|||||.||++||++|||+|||||.|||||||+||++.|||++|.|+.++ ..++.+
T Consensus 452 ~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~ 529 (559)
T 2q9o_A 452 ASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPAD--LRQRIS 529 (559)
T ss_dssp TSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHH--HGGGCC
T ss_pred ccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcch--hhhccc
Confidence 7887654456789999999999999999999999999999999999999999999999999986432 344443
Q ss_pred C--CC-CCCCC
Q 008422 559 P--PA-DLPQC 566 (566)
Q Consensus 559 ~--p~-~~~~c 566 (566)
+ |. .+++|
T Consensus 530 ~~~p~~~~~~C 540 (559)
T 2q9o_A 530 QEDEDDFNRVC 540 (559)
T ss_dssp HHHHHHHHHHH
T ss_pred cCCchhhhhhc
Confidence 3 33 44555
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=1.5e-90 Score=747.68 Aligned_cols=470 Identities=29% Similarity=0.516 Sum_probs=357.5
Q ss_pred EEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-----CceeEEEeCccccCCCCCCCCCCCC
Q 008422 26 VEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-----YNLTIHWHGIFQLLSAWADGPSMIT 100 (566)
Q Consensus 26 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~vt 100 (566)
.+|+|++++..+++||+++.+|+|||++ ||+|++++||+|+|+|+|.|+ ++|+|||||+++.+.+|+||+|+++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999998 9999999999999889999999999
Q ss_pred CCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCC-CCCCCCCCcceeEEeceecccCHHHHHHHH
Q 008422 101 QCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGH-KYPFPKPNKEVPIILGEWWNADIIDVAKQA 178 (566)
Q Consensus 101 q~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (566)
||+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+. +.+++..++|++|+++||++....++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 9999999999999997689999999999998887 99999999987532 122222246999999999998754321
Q ss_pred HhcCCCCCCCceEEEcCCCCCCCCCCC-CCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEee
Q 008422 179 QATGGGPNISDAYTINGRPGDLYPCSQ-NQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTD 257 (566)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~g~~~~~~~-~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d 257 (566)
+ ...++.++|||+ + .+.|.. ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.++
T Consensus 161 ---~--~~~~d~~liNG~-~-~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 161 ---G--AAQPDATLINGK-G-RYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTB-C-CBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ---C--CCCCCEEEECcc-c-ccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 1 135789999999 4 345642 3458999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEeeCCCCceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccc
Q 008422 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNL 335 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 335 (566)
++.|+|||||||+|++++.+|+|+|++.....+.. ..+......|+|+|+++....+..+..+..... ...+|
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~~l-----~~~~l 308 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPAQL-----NEADL 308 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCCBC-----CGGGC
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccCCC-----ccccc
Confidence 99999999999999999778999999986532210 001122346999998764321111111110000 01234
Q ss_pred ccCCCCCCCC-CCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCC
Q 008422 336 TGLKGGPQWV-PVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFP 414 (566)
Q Consensus 336 ~~l~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~ 414 (566)
+++.....+. ..+...+.++.+.... .+. .|+|||++|..+. .|+|...+.+ .+.
T Consensus 309 ~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~-~P~l~~~~~g---~~~---- 364 (503)
T 1hfu_A 309 HALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPS-VPTLLQIMSG---AQS---- 364 (503)
T ss_dssp BBSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCS-SCHHHHHHTT---CCS----
T ss_pred cccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCC-CcchhhhhcC---Ccc----
Confidence 4332222111 1112334333322211 122 7999999998876 3554444322 110
Q ss_pred CCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCccccccc
Q 008422 415 DNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQK 494 (566)
Q Consensus 415 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~ 494 (566)
+ .....++.++.++.|++|||+++|.. ..+.||||||||+|+||+++.+ ..
T Consensus 365 ---~----------------~~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~--------~~ 415 (503)
T 1hfu_A 365 ---A----------------NDLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGS--------ST 415 (503)
T ss_dssp ---G----------------GGSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTC--------CC
T ss_pred ---c----------------ccCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCC--------Cc
Confidence 0 00122457889999999999999643 2479999999999999998754 24
Q ss_pred ccCCCCCcceeEEe-CCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008422 495 FNLVNPQRRNTIAV-PVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGPTPSTRLPPPP-ADLPQC 566 (566)
Q Consensus 495 ~n~~~p~~rDTv~v-p~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 566 (566)
+|+.+|+|||||.| |+++|++|||+|||||.|+|||||+||++.|||++|.|.+.. ..++.++| .+.+.|
T Consensus 416 ~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 416 YNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLC 487 (503)
T ss_dssp CCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHH
T ss_pred cccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhc
Confidence 67889999999999 999999999999999999999999999999999999986432 33454444 445666
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=2.4e-83 Score=681.25 Aligned_cols=405 Identities=22% Similarity=0.337 Sum_probs=319.7
Q ss_pred CCceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCC
Q 008422 22 SAAIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQ 101 (566)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq 101 (566)
.+..++|+|++++..++++|+++.+|+|||++|||+|++++||+|+|+|+|.++++|+|||||+++.+ ++||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 45678999999999999999999999999999999999999999999999999999999999999875 689986
Q ss_pred CcCCCCCeeEEEEEeC-CCCcceeEeecchhh----cc-cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHH--
Q 008422 102 CPITPGNSYTYKFRIV-NQEGTLWWHAHFSML----RA-TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIID-- 173 (566)
Q Consensus 102 ~~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~~~----~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 173 (566)
+.|+||++|+|+|+++ +++||||||||.++. .. ||+|+|||+++.+.. +....++|++|+++||+++....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 4599999999999985 489999999999753 33 999999999875421 11135789999999999875200
Q ss_pred HHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCc-C
Q 008422 174 VAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYT-E 252 (566)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~ 252 (566)
........| ..++.++|||+. .|.++|++| +|||||+|+|+.+.+.|+|+||+|+||++||.++ +
T Consensus 166 ~~~~~~~~g---~~~~~~~iNG~~----------~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~ 231 (439)
T 2xu9_A 166 HTPMDWMNG---KEGDLVLVNGAL----------RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEE 231 (439)
T ss_dssp CCHHHHHHC---CCCSEEEETTEE----------SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred CCccccccC---CCCCEEEECCcc----------CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCC
Confidence 000000012 346799999993 478999999 9999999999999999999999999999999998 9
Q ss_pred cEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCC-------------CCCCcceEEEEEEcCCCCCCCCCCCC
Q 008422 253 PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQI-------------PFDNTTTRGIVVYDGATTANPLMPVL 319 (566)
Q Consensus 253 p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~-------------~~~~~~~~ail~y~~~~~~~~~~p~~ 319 (566)
|+.++++.|+|||||||+|++++ +|+|++++.....+... ........++++|.+.... ..+|.
T Consensus 232 p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~- 308 (439)
T 2xu9_A 232 PLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP-LPLPK- 308 (439)
T ss_dssp EEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC-CCCCS-
T ss_pred ceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc-ccCcc-
Confidence 99999999999999999999995 89999999865433210 0112346789999875321 11111
Q ss_pred CCCCCCCcccccccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhh
Q 008422 320 PAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQ 399 (566)
Q Consensus 320 p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~ 399 (566)
.+.++. +...+ ..++++.+.... . + ..|.+||++|..+.
T Consensus 309 --------------~l~~~~----~l~~~-~~~r~~~l~~~~--~------------g--~~~~iNg~~~~~~~------ 347 (439)
T 2xu9_A 309 --------------ALSPFP----TLPAP-VVTRRLVLTEDM--M------------A--ARFFINGQVFDHRR------ 347 (439)
T ss_dssp --------------CCCCCC----CCCCC-SEEEEEEEEEEG--G------------G--TEEEETTBCCCTTC------
T ss_pred --------------cCCCcc----cCCCC-CcceEEEEEeec--c------------C--ceEeECCEECCCCC------
Confidence 111111 00111 123555554432 0 1 26899998874322
Q ss_pred hhhcccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEE
Q 008422 400 AFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVL 479 (566)
Q Consensus 400 ~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl 479 (566)
..+.++.|++++|+|+|.+. +.||||||||+||||
T Consensus 348 ------------------------------------------~~~~~~~g~~~~~~~~N~~~---~~HP~HLHG~~F~Vl 382 (439)
T 2xu9_A 348 ------------------------------------------VDLKGQAQTVEVWEVENQGD---MDHPFHLHVHPFQVL 382 (439)
T ss_dssp ------------------------------------------CCEEECTTCEEEEEEEECSS---SCEEEEESSCCBEEE
T ss_pred ------------------------------------------CceecCCCCEEEEEEEcCCC---CCCCceeCCCcEEEE
Confidence 12467889999999999754 899999999999999
Q ss_pred EeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 480 AQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 480 ~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
+++.+. +.+|.|||||.||+++|++|||++||||.|+|||||++|++.|||++|+|.
T Consensus 383 ~~~g~~-----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 383 SVGGRP-----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EETTEE-----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred eeCCCC-----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 986432 247899999999999999999999999999999999999999999999983
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=1.3e-82 Score=676.34 Aligned_cols=406 Identities=16% Similarity=0.198 Sum_probs=314.7
Q ss_pred ceEEEEEEEEEEEecc-CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCC
Q 008422 24 AIVEHTFHVKNLTIGR-LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQC 102 (566)
Q Consensus 24 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~ 102 (566)
.+++|+|++++...++ +|+.+.+|+|||++|||+|++++||+|+|+|+|.++++|+|||||+++... +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999998 799999999999999999999999999999999999999999999999987 69997 89
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEeecchhhc----c-cceeEEEEeCCCCCCCCCCC--CCcceeEEeceecccCHHHHH
Q 008422 103 PITPGNSYTYKFRIVNQEGTLWWHAHFSMLR----A-TVHGALIIRPRSGHKYPFPK--PNKEVPIILGEWWNADIIDVA 175 (566)
Q Consensus 103 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~----~-Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 175 (566)
+|+||++|+|+|++++++||||||||.++.+ . ||+|+|||+++.+...+++. .++|++|+++||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999944599999999996643 2 99999999988654443433 478999999999987543221
Q ss_pred HHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEE-cCCeEEEEEecCCCc-Cc
Q 008422 176 KQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKI-ANHNFTVVAIDACYT-EP 253 (566)
Q Consensus 176 ~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p 253 (566)
. ...+.....++.++|||+. .|.++|++| +|||||+|+|+.+.+.|+| +||+|+||++||.++ +|
T Consensus 172 ~--~~~~~~~~~~d~~liNG~~----------~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P 238 (451)
T 2uxt_A 172 Y--NEPGSGGFVGDTLLVNGVQ----------SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAP 238 (451)
T ss_dssp C--CCCSSSCCCCSEEEETTEE----------SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEE
T ss_pred c--ccccCCCCcCCEEEECCcc----------cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCc
Confidence 0 0112233567899999993 378999999 9999999999999999999 899999999999998 89
Q ss_pred EEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCC------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCc
Q 008422 254 YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQI------PFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPT 327 (566)
Q Consensus 254 ~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~------~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~ 327 (566)
+.++++.|+|||||||+|++++ +|+|++++.....+... ........++++|............+|
T Consensus 239 ~~~~~l~l~pgeR~dvlv~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p------- 310 (451)
T 2uxt_A 239 VSVKQLSLAPGERREILVDMSN-GDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLP------- 310 (451)
T ss_dssp EEESSEEECTTCEEEEEEECTT-CCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCC-------
T ss_pred eEeceEEECceeEEEEEEEeCC-CCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCc-------
Confidence 9999999999999999999994 68999998875432110 011123457888876432210000111
Q ss_pred ccccccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCC
Q 008422 328 AHRFYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGG 407 (566)
Q Consensus 328 ~~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g 407 (566)
..|.++... ..+ .+.+..+.+. + .|+|||++|..+.
T Consensus 311 -----~~L~~~~~~----~~~--~~~~~~~~l~----------------~---~~~iNg~~f~~~~-------------- 346 (451)
T 2uxt_A 311 -----MRLLPTEIM----AGS--PIRSRDISLG----------------D---DPGINGQLWDVNR-------------- 346 (451)
T ss_dssp -----SCSSSSCCC----CCC--CSEEEEEEEC----------------S---SSSBTTBCCCTTC--------------
T ss_pred -----cccCCCCCC----CCC--CcceEEEEEe----------------e---EEEECCEeCCCCC--------------
Confidence 122222111 111 1222222211 1 4788998774221
Q ss_pred cccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCC
Q 008422 408 IFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFD 487 (566)
Q Consensus 408 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~ 487 (566)
..+.++.|++|+|+|+|. +.||||||||+|+||+++.
T Consensus 347 ----------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G---- 383 (451)
T 2uxt_A 347 ----------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNG---- 383 (451)
T ss_dssp ----------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETT----
T ss_pred ----------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCC----
Confidence 124678899999999995 5899999999999999852
Q ss_pred cccccccccCCCCCcceeEEeCCCcEEEEEEEecCcee----EEEEeecccccccccEEEEEEecC
Q 008422 488 AARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGV----WFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 488 ~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~----w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
..+++.+|.|||||.| +++++|+|++||||. |||||||++|++.|||++|+|.+.
T Consensus 384 -----~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~ 442 (451)
T 2uxt_A 384 -----AMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPV 442 (451)
T ss_dssp -----BCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECS
T ss_pred -----cCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccC
Confidence 2356678999999999 899999999999988 999999999999999999999764
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.7e-80 Score=669.36 Aligned_cols=422 Identities=20% Similarity=0.273 Sum_probs=318.8
Q ss_pred ceEEEEEEEEEEE--eccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCC
Q 008422 24 AIVEHTFHVKNLT--IGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQ 101 (566)
Q Consensus 24 ~~~~~~l~~~~~~--~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq 101 (566)
.+++|+|++++.. +.++|+.+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||+++.. ++||+ +|
T Consensus 35 ~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~---~~ 109 (534)
T 3abg_A 35 EIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGW---AE 109 (534)
T ss_dssp CCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTC---SS
T ss_pred ceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCC---CC
Confidence 3578999999755 67789999999999999999999999999999999999999999999999876 47997 47
Q ss_pred CcCCCCCeeEEEEEeCCCCcceeEeecchhhcc-----cceeEEEEeCCCCCCCCCCC--CCcceeEEeceecccCHHHH
Q 008422 102 CPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-----TVHGALIIRPRSGHKYPFPK--PNKEVPIILGEWWNADIIDV 174 (566)
Q Consensus 102 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-----Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~ 174 (566)
|+|.||++++|+|++.+++||||||||.+++++ ||+|+|||+++.+...+++. .++|++|+++||+++...++
T Consensus 110 ~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~ 189 (534)
T 3abg_A 110 DITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNL 189 (534)
T ss_dssp SCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCB
T ss_pred CCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCce
Confidence 999999999999998556899999999987542 99999999998876655554 26789999999988653322
Q ss_pred HHHHHhcCC-CCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcC-------CeEEEEEe
Q 008422 175 AKQAQATGG-GPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIAN-------HNFTVVAI 246 (566)
Q Consensus 175 ~~~~~~~g~-~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g-------h~~~via~ 246 (566)
.. ..+. ....++.++|||+. .+.++|++ ++|||||||+|+.+.+.|+|++ |+|+||++
T Consensus 190 ~~---~~~~~~~~~gd~~lvNG~~----------~p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~ 255 (534)
T 3abg_A 190 VT---TNGELNSFWGDVIHVNGQP----------WPFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS 255 (534)
T ss_dssp CC---CTTCSSCCCCSEEEETTEE----------SCBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE
T ss_pred ec---cCCCCccccCceeccCCcc----------CceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe
Confidence 11 0111 22357899999994 36788888 5899999999999999999987 99999999
Q ss_pred cCCCc-CcEEeeEEEECCCceEEEEEeeCCCCc-eeEEEeeeccc-CCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCC
Q 008422 247 DACYT-EPYVTDVVVIAPGQTTDVLLKADQPVG-SYYMAARAYAS-APQIPFDNTTTRGIVVYDGATTANPLMPVLPAFN 323 (566)
Q Consensus 247 DG~~~-~p~~~d~~~l~pgeR~dv~v~~~~~~G-~y~~~~~~~~~-~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~ 323 (566)
||.++ +|+.+++|.|+|||||||+|++++.+| +|+|+...... +...........++++|....... .+.
T Consensus 256 DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~-----~~~-- 328 (534)
T 3abg_A 256 DSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTT-----QPD-- 328 (534)
T ss_dssp TTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSS-----CSC--
T ss_pred CCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCc-----CCC--
Confidence 99865 999999999999999999999997677 69998754221 211111112345789987543210 000
Q ss_pred CCCcccccccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhc
Q 008422 324 DNPTAHRFYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFF 403 (566)
Q Consensus 324 ~~~~~~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~ 403 (566)
. ......|..+.. +. .+...++++. +.. . ...|+|||++|..+. .+
T Consensus 329 -~---~~~P~~L~~~~~---p~-~~~~~~~~~~----~~~------------~--~~~w~iNG~~f~~~~-~p------- 374 (534)
T 3abg_A 329 -T---SVVPANLRDVPF---PS-PTTNTPRQFR----FGR------------T--GPTWTINGVAFADVQ-NR------- 374 (534)
T ss_dssp -C---CCCCCCCCCCSC---CC-CCCCCCEEEE----CSC------------C--CSTTCCCCBTTBCTT-SC-------
T ss_pred -C---CCCccccccCCC---CC-CccccceEEE----Eec------------c--CceeEECCcccCCCC-Cc-------
Confidence 0 001112222210 11 1122333322 211 0 125889998885332 00
Q ss_pred ccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCC
Q 008422 404 NVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGF 483 (566)
Q Consensus 404 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~ 483 (566)
....++.|++++|+|+|.+. .+.||||||||+|+||+++.
T Consensus 375 --------------------------------------~l~~v~~G~~~~w~i~N~~~--~~~HP~HLHG~~F~Vl~~~~ 414 (534)
T 3abg_A 375 --------------------------------------LLANVPVGTVERWELINAGN--GWTHPIHIHLVDFKVISRTS 414 (534)
T ss_dssp --------------------------------------CCCEECTTCEEEEEEEECSS--SCCCCEEESSCCEEEEEESS
T ss_pred --------------------------------------ceeeccCCCEEEEEEEcCCC--CCCcCEEECCeeEEEEEEcC
Confidence 11246789999999999642 36899999999999999976
Q ss_pred CCCCcccccccccCCCCCcceeEEeCCCcEEEEEEE-ecCceeEEEEeecccccccccEEEEEEecCC
Q 008422 484 GNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFR-ANNPGVWFMHCHLDVHLPWGLATAFVVENGP 550 (566)
Q Consensus 484 g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~-adnpG~w~~HCHil~H~~~GM~~~~~V~~~~ 550 (566)
|.+. ...+++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.|...+
T Consensus 415 g~~~----~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 415 GNNA----RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp CCSS----SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred CCCc----CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 5432 12244556 8999999999999999998 9999999999999999999999999998654
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=3.1e-79 Score=661.04 Aligned_cols=427 Identities=18% Similarity=0.234 Sum_probs=314.0
Q ss_pred ceEEEEEEEEEEEecc--CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCC----------------------cee
Q 008422 24 AIVEHTFHVKNLTIGR--LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPY----------------------NLT 79 (566)
Q Consensus 24 ~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~----------------------~~~ 79 (566)
...+|+|++++..... ++..+.+|+|||++|||+|+|++||+|+|+|+|.|+. +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3455999999988655 4578999999999999999999999999999999975 899
Q ss_pred EEEeCccccCCCCCCCCCC--CCCCcCCCCCee---EEEEEeCCCCcceeEeecchhhc----c-cceeEEEEeCCCCCC
Q 008422 80 IHWHGIFQLLSAWADGPSM--ITQCPITPGNSY---TYKFRIVNQEGTLWWHAHFSMLR----A-TVHGALIIRPRSGHK 149 (566)
Q Consensus 80 iH~HG~~~~~~~~~DG~~~--vtq~~i~PG~~~---~Y~f~~~~~~Gt~wYH~H~~~~~----~-Gl~G~liV~~~~~~~ 149 (566)
|||||+++.+ ++||+|+ ++||+|+||++| +|+|++.+++||||||||.++.+ . ||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 9999999885 4699995 789999999554 99999856899999999998643 2 999999999987766
Q ss_pred CCCCCCCcceeEEeceecccCHHHHHHHHH----------hcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEE
Q 008422 150 YPFPKPNKEVPIILGEWWNADIIDVAKQAQ----------ATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTY 219 (566)
Q Consensus 150 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~ 219 (566)
.+++..++|++|+++||+++...++..... ........++.++|||+. .+.++++++ +|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~----------~p~~~v~~~-~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKV----------WPYLEVEPR-KY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEE----------SCEEECCSS-EE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCcc----------cceEEecCC-EE
Confidence 666677899999999998765432211000 000122457899999994 367899885 89
Q ss_pred EEEEEecccCceEEEEEcCC-eEEEEEecCCCc-CcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCC
Q 008422 220 LLRIINAALNNQLFFKIANH-NFTVVAIDACYT-EPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDN 297 (566)
Q Consensus 220 rlRliN~~~~~~~~~~l~gh-~~~via~DG~~~-~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~ 297 (566)
||||||+|+.+.+.|+|+|| +|+||++||.++ +|+.++++.|+|||||||+|++++.+|++... .....+.. ....
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l-~~~~~~~~-~~~~ 328 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIIL-ANSAGCGG-DVNP 328 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEE-EECCCSSS-SCCT
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEE-Eecccccc-cCCC
Confidence 99999999999999999999 999999999998 89999999999999999999999767874332 22122211 1111
Q ss_pred cceEEEEEEcCCCCCC-CCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCC
Q 008422 298 TTTRGIVVYDGATTAN-PLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVN 376 (566)
Q Consensus 298 ~~~~ail~y~~~~~~~-~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (566)
....++++|..+.... .....+|. .|..+.. .+. .+...++++.+...+. .
T Consensus 329 ~~~~~il~~~~~~~~~~~~~~~~p~------------~l~~~~~--~~~-~~~~~~~~~~l~~~~~-------------~ 380 (513)
T 2wsd_A 329 ETDANIMQFRVTKPLAQKDESRKPK------------YLASYPS--VQH-ERIQNIRTLKLAGTQD-------------E 380 (513)
T ss_dssp TTTTEEEEEECCSCCSSCCCCCCCS------------BCSCCGG--GCC-CCEEEEEEEEEEEEEC-------------T
T ss_pred CCCcceEEEEeccCcccCccCCCCc------------cccCCCC--ccc-CCCcceEEEEEEeecC-------------C
Confidence 2345788887653210 00000110 1111100 000 1112234444333221 1
Q ss_pred CCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEE
Q 008422 377 GQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMIL 456 (566)
Q Consensus 377 ~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~ 456 (566)
.+...|.+||++|..+. .+.++.|++|+|+|
T Consensus 381 ~g~~~~~iNg~~~~~~~-------------------------------------------------~~~~~~g~~~~w~l 411 (513)
T 2wsd_A 381 YGRPVLLLNNKRWHDPV-------------------------------------------------TETPKVGTTEIWSI 411 (513)
T ss_dssp TSCEEEEETTBCTTSCC-------------------------------------------------CBCCBTTCEEEEEE
T ss_pred CCCceEeECCccCCCcc-------------------------------------------------cEecCCCCEEEEEE
Confidence 12346789998874221 12456799999999
Q ss_pred EeCCccCCCCCceeeeCCcEEEEEeCCC---CCCcccccccccCCC---------CCcceeEEeCCCcEEEEEEEe-cCc
Q 008422 457 QNTALVVLENHPMHVHGFDFHVLAQGFG---NFDAARDRQKFNLVN---------PQRRNTIAVPVGGWAVIRFRA-NNP 523 (566)
Q Consensus 457 ~n~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~~~~~~n~~~---------p~~rDTv~vp~~g~~virf~a-dnp 523 (566)
+|.+. +.||||||||+||||+++.+ .|++. .++++.+ +.|||||.|++++++.|+|++ |||
T Consensus 412 ~N~~~---~~HP~HlHG~~F~Vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnp 485 (513)
T 2wsd_A 412 INPTR---GTHPIHLHLVSFRVLDRRPFDIARYQES---GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYS 485 (513)
T ss_dssp EECSS---SCEEEEESSCCEEEEEEEEBCHHHHHHH---CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCC
T ss_pred EcCCC---CCcCEeEeCceEEEEEecCccccccccc---ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCC
Confidence 99753 79999999999999998642 22221 1233333 459999999999999998888 899
Q ss_pred eeEEEEeecccccccccEEEEEEec
Q 008422 524 GVWFMHCHLDVHLPWGLATAFVVEN 548 (566)
Q Consensus 524 G~w~~HCHil~H~~~GM~~~~~V~~ 548 (566)
|.|+|||||++|++.|||+.|+|.+
T Consensus 486 G~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 486 GRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCEEEEcCChhhhhcCCceeEEEeC
Confidence 9999999999999999999999964
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.2e-78 Score=645.63 Aligned_cols=417 Identities=22% Similarity=0.332 Sum_probs=308.4
Q ss_pred cCCceEEEEEEEEEEEecc-CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGR-LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
..+.+++|+|++++...++ +|+.+.+|+|||++|||+||+++||+|+|+|+|.++++|+|||||+++.+ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 4578899999999999987 59999999999999999999999999999999999999999999999864 579986
Q ss_pred CCCcCCCCCeeEEEEEeCCC-CcceeEeecchhhc----c-cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHH
Q 008422 100 TQCPITPGNSYTYKFRIVNQ-EGTLWWHAHFSMLR----A-TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIID 173 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~~-~Gt~wYH~H~~~~~----~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (566)
||+|.||++|+|+|+++++ +||||||||.++.+ . ||+|+|||+++++...++ ++++ ++++||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999433 89999999986533 2 999999999987654432 3344 8999999875322
Q ss_pred HHH---HHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCC
Q 008422 174 VAK---QAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACY 250 (566)
Q Consensus 174 ~~~---~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~ 250 (566)
+.. .....| ..++.++|||+. .|.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||.+
T Consensus 197 ~~~~~~~~~~~g---~~gd~~lvNG~~----------~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~ 261 (481)
T 3zx1_A 197 IPNNNLNDWLNG---REGEFVLINGQF----------KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGL 261 (481)
T ss_dssp CCCCCHHHHHHC---CCCSEEEETTEE----------SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEE
T ss_pred cccccchhhccC---CcCCEEEECCcc----------CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCc
Confidence 210 000112 356899999993 4799999998 9999999999999999999999999999887
Q ss_pred c-CcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccc
Q 008422 251 T-EPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAH 329 (566)
Q Consensus 251 ~-~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~ 329 (566)
+ +|+.++++.|+|||||||+|+++ ++++|.+.+..................++++..... +..+|.
T Consensus 262 ~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~lP~----------- 328 (481)
T 3zx1_A 262 IEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE-NVELPK----------- 328 (481)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC-CCCCCS-----------
T ss_pred cCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC-CccCCc-----------
Confidence 7 99999999999999999999999 578899988655432110000112233444432211 111221
Q ss_pred ccccccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCe------eeEeeccccccCCCCcchhhhhhc
Q 008422 330 RFYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQR------NSASMNNHSFQPPTSLSLLQAFFF 403 (566)
Q Consensus 330 ~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~in~~~~~~p~~~~ll~~~~~ 403 (566)
.|..+. +...+ ...+++.+.... .... ......... ..|+|||+.|...
T Consensus 329 ----~l~~~~----~~~~~-~~~r~~~l~~~~--~~~~---~~~~~~~~~~~~~~~~~~~iNG~~~~~~----------- 383 (481)
T 3zx1_A 329 ----NLKIFK----PSEEP-KEFKEIIMSEDH--MQMH---GMMGKSEGELKIALASMFLINRKSYDLK----------- 383 (481)
T ss_dssp ----CSCCCC----CCCCC-CEEEEEEEEECC--STTT---TGGGCCHHHHHHHHHTTEEETTBCCCTT-----------
T ss_pred ----cccCCC----CCCCC-CcEEEEEEeccc--hhcc---cccccccccccccccceeEECCEeCCCC-----------
Confidence 111111 00011 123333333221 1000 000000000 1388888766311
Q ss_pred ccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeC-
Q 008422 404 NVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQG- 482 (566)
Q Consensus 404 ~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g- 482 (566)
...+.++.|++|+|+|.|.+ .+.||||||||.|+|++++
T Consensus 384 -------------------------------------~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~ 423 (481)
T 3zx1_A 384 -------------------------------------RIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKL 423 (481)
T ss_dssp -------------------------------------CCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEE
T ss_pred -------------------------------------CceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecc
Confidence 13356789999999999965 3899999999999999883
Q ss_pred CCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 483 FGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 483 ~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.| .......+.|||||.|+|+++++|+|++||||.|+|||||++|++.|||..|+|.
T Consensus 424 ~g--------~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 424 NG--------KVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp TT--------EEEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred cC--------CCCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 11 1112245789999999999999999999999999999999999999999999996
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.6e-78 Score=643.79 Aligned_cols=385 Identities=19% Similarity=0.304 Sum_probs=294.8
Q ss_pred EEECCC-CCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeE
Q 008422 47 TAVNGS-LPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWW 125 (566)
Q Consensus 47 ~~~NG~-~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wY 125 (566)
|+|||+ +|||+|++++||+|+|+|+|.|+++|+|||||+++.. ++||+|+ |+|.||++|+|+|++++++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 899999 9999999999999999999999999999999999874 4799998 999999999999999558999999
Q ss_pred eecchh----hcc-cceeEEEEeCCCCCCCCCCCCC-cceeEEeceecccCHHHHHH----HHHhcCCCCCCCceEEEcC
Q 008422 126 HAHFSM----LRA-TVHGALIIRPRSGHKYPFPKPN-KEVPIILGEWWNADIIDVAK----QAQATGGGPNISDAYTING 195 (566)
Q Consensus 126 H~H~~~----~~~-Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~----~~~~~g~~~~~~~~~liNG 195 (566)
|||.++ +.. ||+|+|||+++++. .+++ +| +|++|+++||+++. .++.. .....| ..++.++|||
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~---~~~~~~liNG 176 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAG---FLGNAVLVNG 176 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHC---CCCSEEEETT
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccC---ccccEEEECC
Confidence 999654 333 99999999988765 3333 45 89999999999876 33211 001112 4578999999
Q ss_pred CCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEE--cC---CeEEEEEecCCCcC-cEEeeEEEECCCceEEE
Q 008422 196 RPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKI--AN---HNFTVVAIDACYTE-PYVTDVVVIAPGQTTDV 269 (566)
Q Consensus 196 ~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l--~g---h~~~via~DG~~~~-p~~~d~~~l~pgeR~dv 269 (566)
+. .+.++|++| +|||||+|+|+.+.+.|+| +| |+|+||++||.+++ |+.++++.|+|||||||
T Consensus 177 ~~----------~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dv 245 (448)
T 3aw5_A 177 VK----------DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEV 245 (448)
T ss_dssp EE----------TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEE
T ss_pred cc----------cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEE
Confidence 93 478999999 9999999999999999999 99 99999999999996 99999999999999999
Q ss_pred EEeeCCCCceeEEEeeecccCCCC---------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCC
Q 008422 270 LLKADQPVGSYYMAARAYASAPQI---------PFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKG 340 (566)
Q Consensus 270 ~v~~~~~~G~y~~~~~~~~~~~~~---------~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~ 340 (566)
+|+++ .+.|+|++.....+... ........++++|++....+ . | ..|..+..
T Consensus 246 lv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-p------------~~L~~lp~ 306 (448)
T 3aw5_A 246 VVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAV----P-V------------EALSDPPP 306 (448)
T ss_dssp EEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCC----C-C------------CCCSCCCC
T ss_pred EEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCC----C-c------------cccCCCCC
Confidence 99998 37899998876543210 11223467888887643221 1 1 01111110
Q ss_pred CCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcc
Q 008422 341 GPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLI 420 (566)
Q Consensus 341 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~ 420 (566)
...+...++++.+... ...|.|||++|..+. +
T Consensus 307 ----~~~~~~~~~~~~l~~~------------------~~~~~iNg~~~~~~~--p------------------------ 338 (448)
T 3aw5_A 307 ----EPPKPTRTRRFALSLS------------------GMQWTINGMFWNASN--P------------------------ 338 (448)
T ss_dssp ----CCCCCSEEEEEEEEEE------------------TTEEEETTBCCCTTC--T------------------------
T ss_pred ----CCCCCCceEEEEEeCC------------------CceeeECCCcCCCCC--C------------------------
Confidence 0122233444444321 125999999885322 0
Q ss_pred cccCCCccCCCccccCCCCcceEEE-ccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCccccccccc---
Q 008422 421 FDFTNTALSNDSSLLFAPKRTSVKP-LKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFN--- 496 (566)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n--- 496 (566)
.+. ++.|++|+|+|+|.+. .+.||||||||+||||+++ |.+.......+++
T Consensus 339 ----------------------~~~~~~~g~~v~~~i~N~~~--~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~ 393 (448)
T 3aw5_A 339 ----------------------LFEHVSVEGVELWEIVNDKA--SMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGR 393 (448)
T ss_dssp ----------------------TCCCEEECEEEEEEEEECSS--SCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCC
T ss_pred ----------------------ceeccCCCCeEEEEEEcCCC--CCCcCEEECCceEEEEEec-CCCcccccccccccCC
Confidence 112 5679999999999751 3799999999999999984 4443211222232
Q ss_pred -CCCCCcceeEEeCCCcEEEEE--EE---ecCceeEEEEeecccccccccEEEEEEe
Q 008422 497 -LVNPQRRNTIAVPVGGWAVIR--FR---ANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 497 -~~~p~~rDTv~vp~~g~~vir--f~---adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
..++.|||||.|+++++++|+ |+ +||| |+|||||++|++.|||++|+|.
T Consensus 394 ~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 394 LPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp CGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred CccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 334579999999999998655 99 9999 9999999999999999999883
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=5.9e-78 Score=669.35 Aligned_cols=466 Identities=18% Similarity=0.200 Sum_probs=306.5
Q ss_pred CceEEEEEEEEEEEecc--CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCc-----------------------
Q 008422 23 AAIVEHTFHVKNLTIGR--LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYN----------------------- 77 (566)
Q Consensus 23 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~----------------------- 77 (566)
...+.|+|++++..... ++..+.+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 34567889888887544 56788999999999999999999999999999998654
Q ss_pred ------------------eeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhc----c-
Q 008422 78 ------------------LTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLR----A- 134 (566)
Q Consensus 78 ------------------~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~----~- 134 (566)
|+|||||+++.+ ++||++ ||+|.||++|+|+|++.+++||||||||.++.+ .
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678888988764 468875 899999999999999866789999999997643 2
Q ss_pred cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHHHH-------------hc---CCCCCCCceEEEcCCCC
Q 008422 135 TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQAQ-------------AT---GGGPNISDAYTINGRPG 198 (566)
Q Consensus 135 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~~---g~~~~~~~~~liNG~~g 198 (566)
||+|+|||+++.+..++++.+++|++|+|+||+++...+...... .. ......++.+++||+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~-- 262 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR-- 262 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE--
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCC--
Confidence 999999999888777777788999999999998764322110000 00 011235678999999
Q ss_pred CCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCC-------eEEEEEecCCCc-CcEEee------EEEECCC
Q 008422 199 DLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANH-------NFTVVAIDACYT-EPYVTD------VVVIAPG 264 (566)
Q Consensus 199 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~~~l~pg 264 (566)
..+.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+||
T Consensus 263 --------~~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 263 --------IWPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp --------ESCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred --------ccceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 346788875 57999999999999999999998 599999999998 677664 7999999
Q ss_pred ceEEEEEeeCCCCceeEEEeeecccCCC---CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCC
Q 008422 265 QTTDVLLKADQPVGSYYMAARAYASAPQ---IPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGG 341 (566)
Q Consensus 265 eR~dv~v~~~~~~G~y~~~~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~ 341 (566)
|||||+|++++.+|.++........... .........++++|............+|...... ....
T Consensus 334 eRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------~~~~--- 402 (612)
T 3gyr_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGS--------FRRM--- 402 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSS--------CCCC---
T ss_pred eEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccc--------cccc---
Confidence 9999999999877765554433222111 0111222345666654322110001111100000 0000
Q ss_pred CCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCccc
Q 008422 342 PQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIF 421 (566)
Q Consensus 342 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 421 (566)
....+ .............. . .......+.++..........+... .+........+..+
T Consensus 403 --~~~~~--~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ 461 (612)
T 3gyr_A 403 --SHDIP--HGHRLIVLTPPGTK-G--------SGGHPEIWEMAEVEDPADVQVPAEG--------VIQVTGADGRTKTY 461 (612)
T ss_dssp --CTTSC--CEEEEEEEECTTCT-T--------TTTCCEEEEEEECC-----CCSCTT--------EEEEECTTSCEEEE
T ss_pred --ccccc--cccccccccccccc-c--------ccccccccccccccccccccccccc--------eeeeccCCCccccc
Confidence 00001 01111111100000 0 0011112222111110000000000 00000000111111
Q ss_pred ccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcc------------
Q 008422 422 DFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAA------------ 489 (566)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~------------ 489 (566)
..+ .........+.++.|++|+|+|+|.+. +.||||||||+||||+++.+.++..
T Consensus 462 ~~n----------~~~~~~~~~~~~~~g~~~~w~i~N~~~---~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~ 528 (612)
T 3gyr_A 462 RRT----------ARTFNDGLGFTIGEGTHEQWTFLNLSP---ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVR 528 (612)
T ss_dssp EEE----------ECSTTSCCCEEEETTCEEEEEEEECSS---SCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEE
T ss_pred ccc----------CccCCCCcceEeCCCCEEEEEEEcCCC---CCcCEeECCCcEEEEeecCCcCccccccccccccccc
Confidence 111 112233456788999999999999754 8999999999999999854322211
Q ss_pred ---cccccccCCCCCcceeEEeCCCcEEEEEEE-ecCceeEEEEeecccccccccEEEEEEecC
Q 008422 490 ---RDRQKFNLVNPQRRNTIAVPVGGWAVIRFR-ANNPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 490 ---~~~~~~n~~~p~~rDTv~vp~~g~~virf~-adnpG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
......++.++.|||||.||+++|++|||+ +||||.|||||||++|||+|||+.|+|.+.
T Consensus 529 ~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p 592 (612)
T 3gyr_A 529 LDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPP 592 (612)
T ss_dssp EEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECH
T ss_pred cccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCC
Confidence 011234567889999999999999999998 899999999999999999999999999864
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=8.4e-77 Score=631.00 Aligned_cols=426 Identities=19% Similarity=0.267 Sum_probs=305.2
Q ss_pred ceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCc
Q 008422 24 AIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCP 103 (566)
Q Consensus 24 ~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~ 103 (566)
+.++|+|++++...+++|+.+.+|+|||++|||+|++++||+|+|+|+|.++++|+|||||+++... +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 4578999999999999999999999999999999999999999999999999999999999999764 69986 899
Q ss_pred CCCCCeeEEEEEeCCCCcceeEeecchhhc----c-cceeEEEEeCCCCCCCCCCC--CCcceeEEeceecccCHHHHHH
Q 008422 104 ITPGNSYTYKFRIVNQEGTLWWHAHFSMLR----A-TVHGALIIRPRSGHKYPFPK--PNKEVPIILGEWWNADIIDVAK 176 (566)
Q Consensus 104 i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~----~-Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 176 (566)
|.||++++|+|++.+++||||||||.++.+ . ||+|+|||+++.+...+++. ..+|++|+++||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 999999999999955589999999997643 2 99999999988765444443 2469999999999865322110
Q ss_pred HHH-hcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEE-cCCeEEEEEecCCCc-Cc
Q 008422 177 QAQ-ATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKI-ANHNFTVVAIDACYT-EP 253 (566)
Q Consensus 177 ~~~-~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l-~gh~~~via~DG~~~-~p 253 (566)
... ........++.++|||+.. |.+.+ +|++|||||||+|+.+.+.|+| +||+|+||++||.++ +|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P 239 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCc
Confidence 000 0000123568999999942 55655 5789999999999999999999 699999999999987 99
Q ss_pred EEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCC-CCCCCCCCCCCCCCCcccc
Q 008422 254 YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGATT-ANPLMPVLPAFNDNPTAHR 330 (566)
Q Consensus 254 ~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~--~~~~~~~~~ail~y~~~~~-~~~~~p~~p~~~~~~~~~~ 330 (566)
+.+++|.|+|||||||+|+++ +.+.|.+++........ ..+.. ...+++...... ....+|.
T Consensus 240 ~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~P~------------ 304 (488)
T 3od3_A 240 VKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDK--PHPVMRIQPIAISASGALPD------------ 304 (488)
T ss_dssp EEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTS--CEEEEEEEEEEEECCCCCCS------------
T ss_pred cEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccC--ccceeEecccccCCCCCCCc------------
Confidence 999999999999999999999 46789998765443221 11221 222333322110 0111111
Q ss_pred cccccccCCCCCCCCCCCCCcceEEEEEecccc--------------ccCCC-----------CCcccc-CCCCee----
Q 008422 331 FYSNLTGLKGGPQWVPVPLQVDEHMFVTVGLGL--------------DRCPA-----------NATCQG-VNGQRN---- 380 (566)
Q Consensus 331 ~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~--------------~~~~~-----------~~~~~~-~~~~~~---- 380 (566)
.|..+... + ..+....+++.+.+.... ..... ...+.. ..+..+
T Consensus 305 ---~L~~~~~~--~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~ 378 (488)
T 3od3_A 305 ---TLSSLPAL--P-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHH 378 (488)
T ss_dssp ---CCCCCCCC--C-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGG
T ss_pred ---ccccCCCC--c-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccc
Confidence 11111100 0 011123455555432100 00000 000000 001111
Q ss_pred eEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCC
Q 008422 381 SASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTA 460 (566)
Q Consensus 381 ~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~ 460 (566)
.|.|||+.|.... ..+.++.|++|+|.|.|.+
T Consensus 379 ~~~ING~~~~~~~------------------------------------------------~~~~~~~G~~e~w~l~N~~ 410 (488)
T 3od3_A 379 ANKINGQAFDMNK------------------------------------------------PMFAAAKGQYERWVISGVG 410 (488)
T ss_dssp CEEETTBCCCTTC------------------------------------------------CSEECCBSSCEEEEEECTT
T ss_pred eeeECCeeCCCCC------------------------------------------------CceEcCCCCEEEEEEEeCC
Confidence 3678887763111 2356788999999999975
Q ss_pred ccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec----CceeEEEEeeccccc
Q 008422 461 LVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN----NPGVWFMHCHLDVHL 536 (566)
Q Consensus 461 ~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad----npG~w~~HCHil~H~ 536 (566)
. .+.|||||||++|+|+++..... ....+.|||||.|+ ++.+.|+|++| |||.|||||||++|+
T Consensus 411 ~--~~~Hp~HlHg~~F~Vl~~~g~~~---------~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~He 478 (488)
T 3od3_A 411 D--MMLHPFHIHGTQFRILSENGKPP---------AAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHE 478 (488)
T ss_dssp C--CCCEEEEETTCCBEEEEBTTBCC---------CGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHH
T ss_pred C--CCCccEEEcCceEEEeccCCCcc---------ccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHH
Confidence 2 37899999999999999843211 12345799999999 99999999974 578999999999999
Q ss_pred ccccEEEEEE
Q 008422 537 PWGLATAFVV 546 (566)
Q Consensus 537 ~~GM~~~~~V 546 (566)
|.|||..|+|
T Consensus 479 d~GMm~~f~V 488 (488)
T 3od3_A 479 DTGMMLGFTV 488 (488)
T ss_dssp HTTCEEEEEC
T ss_pred hcCCcEEEEC
Confidence 9999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.5e-74 Score=625.85 Aligned_cols=441 Identities=20% Similarity=0.266 Sum_probs=311.2
Q ss_pred CceEEEEEEEEEEEeccC--ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCc-----------------------
Q 008422 23 AAIVEHTFHVKNLTIGRL--CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYN----------------------- 77 (566)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~----------------------- 77 (566)
...++|+|++++...... +..+.+|+|||++|||+|+|++||+|+|+|+|.|+..
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 456889999999987644 5689999999999999999999999999999999753
Q ss_pred ------------------eeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhh----cc-
Q 008422 78 ------------------LTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSML----RA- 134 (566)
Q Consensus 78 ------------------~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~----~~- 134 (566)
|+|||||+++.+. +||++ ||+|.||++++|+|++.+++||||||||.++. ..
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999866 59985 79999999999999985589999999999873 22
Q ss_pred cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHH--HHHHH------Hh----cCCC----CCCCceEEEcCCCC
Q 008422 135 TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIID--VAKQA------QA----TGGG----PNISDAYTINGRPG 198 (566)
Q Consensus 135 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~--~~~~~------~~----~g~~----~~~~~~~liNG~~g 198 (566)
||+|+|||+++++..++++.+|+|++|+++||+++...+ +..+. .. .+.. +..++.++|||+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~-- 262 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR-- 262 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE--
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCc--
Confidence 999999999887766667778999999999999974311 00000 00 0111 246789999999
Q ss_pred CCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCC-------eEEEEEecCCCc-CcEEee------EEEECCC
Q 008422 199 DLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANH-------NFTVVAIDACYT-EPYVTD------VVVIAPG 264 (566)
Q Consensus 199 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh-------~~~via~DG~~~-~p~~~d------~~~l~pg 264 (566)
..|.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||.++ +|+.++ +|.|+||
T Consensus 263 --------~~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 263 --------IWPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp --------ESCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred --------cCCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 3478999999 9999999999999999999999 899999999999 799999 9999999
Q ss_pred ceEEEEEeeCCCCc-eeEEEeeecccCCCCC--CCCcceEEEEEEcCCCCC---CCCCCCCCCCCCCCcccccccccccC
Q 008422 265 QTTDVLLKADQPVG-SYYMAARAYASAPQIP--FDNTTTRGIVVYDGATTA---NPLMPVLPAFNDNPTAHRFYSNLTGL 338 (566)
Q Consensus 265 eR~dv~v~~~~~~G-~y~~~~~~~~~~~~~~--~~~~~~~ail~y~~~~~~---~~~~p~~p~~~~~~~~~~~~~~l~~l 338 (566)
|||||+|++++.+| +|+|+........+.. ........|+++...... +..+|. .|...
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~---------------~L~~~ 398 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPE---------------VLSGS 398 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCS---------------SCCSS
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCCh---------------hhccc
Confidence 99999999998667 5888765421111000 000011135555432211 111221 11100
Q ss_pred CCCCCCCCCCCCcceEEEEEe---ccccccC-----------------CCCCc--cccCCCCeeeEeeccccccCCCCcc
Q 008422 339 KGGPQWVPVPLQVDEHMFVTV---GLGLDRC-----------------PANAT--CQGVNGQRNSASMNNHSFQPPTSLS 396 (566)
Q Consensus 339 ~~~~~~~~~p~~~~~~~~~~~---~~~~~~~-----------------~~~~~--~~~~~~~~~~~~in~~~~~~p~~~~ 396 (566)
.. ..+...+. .+++.+.. ..+.... +.... .....+....|.+||+.|.
T Consensus 399 ~~-~l~~~~~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~------ 469 (612)
T 2g23_A 399 FR-RMSHDIPH--GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN------ 469 (612)
T ss_dssp CC-CCCTTSCC--EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT------
T ss_pred cc-cCCccccc--ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC------
Confidence 00 00000110 11111110 0000000 00000 0000112223444444331
Q ss_pred hhhhhhcccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcE
Q 008422 397 LLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDF 476 (566)
Q Consensus 397 ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F 476 (566)
....+.++.|++|+|+|.|.+. +.||||||||.|
T Consensus 470 -------------------------------------------~~~~~~v~~G~~v~w~l~N~~~---~~HPiHlHg~~F 503 (612)
T 2g23_A 470 -------------------------------------------DGLGFTIGEGTHEQWTFLNLSP---ILHPMHIHLADF 503 (612)
T ss_dssp -------------------------------------------SCCCEEEETTCEEEEEEEECSS---SCEEEEESSCCE
T ss_pred -------------------------------------------CCCceEecCCCEEEEEEEeCCC---CCCCeEEcCceE
Confidence 2245678899999999999754 899999999999
Q ss_pred EEEEeCCCCC---Ccccc------------cccccCCCCCcceeEEeCCCcEEEEEEEec-CceeEEEEeeccccccccc
Q 008422 477 HVLAQGFGNF---DAARD------------RQKFNLVNPQRRNTIAVPVGGWAVIRFRAN-NPGVWFMHCHLDVHLPWGL 540 (566)
Q Consensus 477 ~Vl~~g~g~~---~~~~~------------~~~~n~~~p~~rDTv~vp~~g~~virf~ad-npG~w~~HCHil~H~~~GM 540 (566)
+|++++.+.+ +.... ...++..++.|||||.|+|+++++|+|+++ |||.|||||||++|++.||
T Consensus 504 ~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GM 583 (612)
T 2g23_A 504 QVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGM 583 (612)
T ss_dssp EEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTC
T ss_pred EEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCC
Confidence 9999753221 11100 023445567799999999999999999999 9999999999999999999
Q ss_pred EEEEEEecC
Q 008422 541 ATAFVVENG 549 (566)
Q Consensus 541 ~~~~~V~~~ 549 (566)
|..|+|.+.
T Consensus 584 m~~f~V~p~ 592 (612)
T 2g23_A 584 MRPFVVMPP 592 (612)
T ss_dssp EEEEEEECH
T ss_pred ceEEEECch
Confidence 999999753
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=2.9e-54 Score=437.55 Aligned_cols=272 Identities=27% Similarity=0.426 Sum_probs=229.0
Q ss_pred ceEEEEEEEEEEEeccC-ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCC
Q 008422 24 AIVEHTFHVKNLTIGRL-CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQC 102 (566)
Q Consensus 24 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~ 102 (566)
++|+|+|++++..+++. |..+.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++....++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 47999999999998875 88999999999999999999999999999999999999999999999988789999999999
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEeecchhhc----ccceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHHH
Q 008422 103 PITPGNSYTYKFRIVNQEGTLWWHAHFSMLR----ATVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQA 178 (566)
Q Consensus 103 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (566)
+|.||++++|+|++ +++||||||||...+. .||+|+|||++++..+.+ ...|+|++|+++||++..... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~-~~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIE-KTVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHH-HTCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCccccc-ccccceeEEEEEeeccccccc----c
Confidence 99999999999998 8999999999997653 499999999987643211 146889999999998764211 1
Q ss_pred HhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCc-CcEEee
Q 008422 179 QATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYT-EPYVTD 257 (566)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 257 (566)
...+.....++.++|||+..+ ....+++++|++|||||+|++.. .+.|||+||.|+||+.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 111222235789999999542 23458999999999999999965 578999999999999999998 899999
Q ss_pred EEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008422 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 310 (566)
++.|.||||++|+++++ +||.|+++||................++|+|++..
T Consensus 227 tv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999999 79999999998765542111123467999998854
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=9.2e-53 Score=487.89 Aligned_cols=278 Identities=17% Similarity=0.217 Sum_probs=208.7
Q ss_pred HHHHHHHHHhccccCCceEEEEEEEEEEEeccC----------------------------ceeEEEE-------EECCC
Q 008422 8 LACALVVLASSTLASAAIVEHTFHVKNLTIGRL----------------------------CRQQTIT-------AVNGS 52 (566)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------------------------g~~~~~~-------~~NG~ 52 (566)
+++.+++|++ ..+.+++|+|.+.|++..+... |+.+.++ +||+.
T Consensus 5 ~~~~~~~~~~-~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (1065)
T 2j5w_A 5 ILGIFLFLCS-TPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTT 83 (1065)
T ss_dssp ----------------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSB
T ss_pred HHhhhHHHhc-cccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCC
Confidence 3333344444 3346899999999999975433 2334444 57877
Q ss_pred --------CCCCeEEEecCCEEEEEEEeCCCCceeEEEeCcccc----CCCCCCCCCC--CCCCcCCCCCeeEEEEEeCC
Q 008422 53 --------LPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQL----LSAWADGPSM--ITQCPITPGNSYTYKFRIVN 118 (566)
Q Consensus 53 --------~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~----~~~~~DG~~~--vtq~~i~PG~~~~Y~f~~~~ 118 (566)
+|||+||+++||+|+|+|+|.|+++++|||||++++ +..|+||+++ ++||+|+||++|+|+|++++
T Consensus 84 ~~~~~w~~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~ 163 (1065)
T 2j5w_A 84 IEKPVWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATE 163 (1065)
T ss_dssp CCCCGGGTTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCS
T ss_pred cccccccCCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEecc
Confidence 999999999999999999999999999999999987 4467788888 89999999999999999954
Q ss_pred C---------CcceeEeecchhhc---ccceeEEEEeCCCCCCCCCC-CCCcceeEEec------eecccCHHHHHHHHH
Q 008422 119 Q---------EGTLWWHAHFSMLR---ATVHGALIIRPRSGHKYPFP-KPNKEVPIILG------EWWNADIIDVAKQAQ 179 (566)
Q Consensus 119 ~---------~Gt~wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~~~~ 179 (566)
+ +||||||||.+.++ .||+|+|||++++....|.+ ..|+|++|+++ ||+....... ..
T Consensus 164 ~~gp~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~---~~ 240 (1065)
T 2j5w_A 164 EQSPGEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKT---YC 240 (1065)
T ss_dssp TTSCCTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHH---HC
T ss_pred ccCCccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhh---hh
Confidence 3 49999999999876 39999999999876443332 46789999999 4554322111 10
Q ss_pred -hcCCC-------CCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccC-ceEEEEEcCCeEEEEEecCCC
Q 008422 180 -ATGGG-------PNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALN-NQLFFKIANHNFTVVAIDACY 250 (566)
Q Consensus 180 -~~g~~-------~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~ 250 (566)
..+.. ....+.++|||+.+ ...+.+++++|++|||||+|+|.. ..+.|||+||+|++
T Consensus 241 ~~p~~~~~~~~~~~~~~~~~~iNG~~~-------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v------- 306 (1065)
T 2j5w_A 241 SEPEKVDKDNEDFQQSNRMYSVNGYTF-------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN------- 306 (1065)
T ss_dssp SCGGGCCTTCHHHHHHTEEEEETTEET-------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE-------
T ss_pred cCccccccccccccccCcEEEECCccC-------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE-------
Confidence 00000 01235799999953 135789999999999999999976 58899999999993
Q ss_pred cCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCC
Q 008422 251 TEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATT 311 (566)
Q Consensus 251 ~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 311 (566)
+|+.+|++.|+|||||||+|++++ +|.|+|+|+...... .+..+.++|++...
T Consensus 307 -~p~~~dtv~I~pGer~dVlv~~~~-pG~y~i~~h~~~h~~------~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 307 -KNYRIDTINLFPATLFDAYMVAQN-PGEWMLSCQNLNHLK------AGLQAFFQVQECNK 359 (1065)
T ss_dssp -TTEEESEEEECBTCEEEEEEECCS-CEEEEEEECSHHHHH------TTCEEEEEEECSCC
T ss_pred -CCeeecEEEECCCcEEEEEEEeCC-CeeEEEEecCcchhh------CCCEEEEEEecCCC
Confidence 678999999999999999999995 899999999875433 13678888876543
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=1.8e-52 Score=429.18 Aligned_cols=272 Identities=29% Similarity=0.483 Sum_probs=226.7
Q ss_pred ceEEEEEEEEEEEeccC-ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCC
Q 008422 24 AIVEHTFHVKNLTIGRL-CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQC 102 (566)
Q Consensus 24 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~ 102 (566)
++++|+|++++..++++ |+++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+++....|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 46899999999998886 99999999999999999999999999999999999999999999999999889999999999
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEeecchh--hc--ccceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHHH
Q 008422 103 PITPGNSYTYKFRIVNQEGTLWWHAHFSM--LR--ATVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQA 178 (566)
Q Consensus 103 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--~~--~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (566)
+|.||++++|+|++ +++||||||||... +. .||+|++||+++.....+ ...|+|++++++||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999998 79999999999876 22 499999999987643221 135789999999998632110 0
Q ss_pred HhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCc-CcEEee
Q 008422 179 QATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYT-EPYVTD 257 (566)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d 257 (566)
...+.....++.++|||+.++ ....+++++|++|||||+|+++. .+.|||+||.|+||+.||.++ .|..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 001111125678999999542 23568999999999999999954 788999999999999999998 589999
Q ss_pred EEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008422 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 310 (566)
++.|.||||++|+++++ +||.|+++||....+...........++++|++..
T Consensus 228 tv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 99999999999999998 68999999998764321111123457999998754
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=2.4e-54 Score=482.04 Aligned_cols=241 Identities=15% Similarity=0.170 Sum_probs=181.6
Q ss_pred EEEEEEEEeccC-ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCC--------C
Q 008422 29 TFHVKNLTIGRL-CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSM--------I 99 (566)
Q Consensus 29 ~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~--------v 99 (566)
.+++++...... |+.+..|+ ++|||+|||++||+|+|+|+|.++++++|||||+++... +||+|. +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 344444444443 55665554 899999999999999999999999999999999998642 466554 8
Q ss_pred CCCcCCCCCeeEEEEEeCC---------CCcceeEeecchhhc--c-cceeEEEEeCCCCCCCCCCCCCcceeEEece--
Q 008422 100 TQCPITPGNSYTYKFRIVN---------QEGTLWWHAHFSMLR--A-TVHGALIIRPRSGHKYPFPKPNKEVPIILGE-- 165 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~~~--~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 165 (566)
+||+|+||++|+|+|++++ ++||||||||.+... . ||+|+|||+++.....+.....+|+++++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999842 579999999998743 3 9999999998765332222224888888754
Q ss_pred ----ecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCc-eEEEEEcCCe
Q 008422 166 ----WWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNN-QLFFKIANHN 240 (566)
Q Consensus 166 ----~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~ 240 (566)
|+.......... ..........+.++|||+.. | ..+.+++++|++|||||+|+|+.. .+.|||+||.
T Consensus 205 e~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQD-RDAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCcccccccccccccc-CCCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 444332111100 11111122356789999953 1 356789999999999999999775 6789999999
Q ss_pred EEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCC
Q 008422 241 FTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 241 ~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~ 291 (566)
|+|++ ..+|++.|.|||+++|.++++ ++|.|+++||......
T Consensus 277 f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~~H~~ 318 (742)
T 2r7e_A 277 FLVRN--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHISSHQH 318 (742)
T ss_dssp CEETT--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSSSSST
T ss_pred EEEEe--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCChhHHh
Confidence 99974 357999999999999999999 6899999999865543
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.9e-48 Score=415.77 Aligned_cols=400 Identities=15% Similarity=0.148 Sum_probs=256.2
Q ss_pred CceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCC
Q 008422 23 AAIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQC 102 (566)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~ 102 (566)
+.++++++++++..+..+ ..+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .++|
T Consensus 26 ~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~~ 90 (447)
T 2dv6_A 26 PVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSAI 90 (447)
T ss_dssp CEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECCC
T ss_pred CceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccce
Confidence 345556666554444433 3566899999 899999999999999999998779999998642 2579
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEeecchhhcc-cceeEEEEeCCCCCCCCC-----CCCCcceeEEeceecccCHHHHH-
Q 008422 103 PITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHKYPF-----PKPNKEVPIILGEWWNADIIDVA- 175 (566)
Q Consensus 103 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~-----~~~~~e~~l~~~d~~~~~~~~~~- 175 (566)
+|+||++++|+|++ .++||||||||..+++. ||.|.|+|+++....+.. .....+++..+ |+.......+.
T Consensus 91 ~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~l 168 (447)
T 2dv6_A 91 VNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRIDL 168 (447)
T ss_dssp BCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEEE
T ss_pred ecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEEE
Confidence 99999999999998 77999999999987776 999999999765432210 00000111000 00000000000
Q ss_pred H-HHHhcCC-CCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEeccc-CceEEEEEcCCeEEEEEecCCCcC
Q 008422 176 K-QAQATGG-GPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAAL-NNQLFFKIANHNFTVVAIDACYTE 252 (566)
Q Consensus 176 ~-~~~~~g~-~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~l~gh~~~via~DG~~~~ 252 (566)
. ....... .....+.+++||+. ..|.+++++|++|||||+|.+. ...+.+|+||. ++.||.+
T Consensus 169 ~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~-- 233 (447)
T 2dv6_A 169 ETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA-- 233 (447)
T ss_dssp EEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG--
T ss_pred EEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC--
Confidence 0 0000000 01234578999983 3479999999999999999985 34566788874 3679873
Q ss_pred cEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccc
Q 008422 253 PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFY 332 (566)
Q Consensus 253 p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~ 332 (566)
+++.|.||||+++.++++ .+|+||++|+....... ...+..+.+.|.+... +| ..+. ++.
T Consensus 234 ----~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~---~~~Gl~g~l~v~~~~~----~P---~~d~-----~~~ 293 (447)
T 2dv6_A 234 ----AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPTH---ITNGMYGLLLVEPEGG----LP---QVDR-----EFY 293 (447)
T ss_dssp ----GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHHH---HHTTCEEEEEEECTTC----SC---CCSE-----EEE
T ss_pred ----ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHHH---HhCCCEEEEEEeCCCC----CC---CCCe-----eEE
Confidence 334699999999999998 57999999996211000 0012356666654321 12 1110 000
Q ss_pred cccccCCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCC
Q 008422 333 SNLTGLKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPD 412 (566)
Q Consensus 333 ~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~ 412 (566)
..+....... ....+ ... .+.... . .......|.+||+.+...
T Consensus 294 ~~~~~~~~~~-~~~~~----g~~--~~~~~~--------~--~~~~~~~~~iNG~~~~~~-------------------- 336 (447)
T 2dv6_A 294 VMQGEIYTVK-SFGTS----GEQ--EMDYEK--------L--INEKPEYFLFNGSVGSLT-------------------- 336 (447)
T ss_dssp EEEEEECBSS-CTTCC----EEC--CBBHHH--------H--HTTCCSEEEETTSTTCCC--------------------
T ss_pred EEecccccCC-ccccc----ccc--cCChHH--------h--hccCCCEEEECCcccCCC--------------------
Confidence 0000000000 00000 000 000000 0 001122456666543100
Q ss_pred CCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCccccc
Q 008422 413 FPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDR 492 (566)
Q Consensus 413 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~ 492 (566)
....+.++.|++++|+|.|.+. ...||||||||+|+||+.+.+.
T Consensus 337 ---------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~~------- 380 (447)
T 2dv6_A 337 ---------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGSV------- 380 (447)
T ss_dssp ---------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGCS-------
T ss_pred ---------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCcc-------
Confidence 0145678899999999999752 3689999999999999874221
Q ss_pred ccccCCCCC-cceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCC
Q 008422 493 QKFNLVNPQ-RRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGPT 551 (566)
Q Consensus 493 ~~~n~~~p~-~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~~ 551 (566)
+.+|. +|||+.|++++++.|+|++||||.|+||||+++|++.||+++|.|+...+
T Consensus 381 ----~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 ----VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp ----SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred ----cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 12343 69999999999999999999999999999999999999999999976543
No 23
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=4.8e-48 Score=394.27 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=219.1
Q ss_pred cCCceEEEEEEEEEEEecc-CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CceeEEEeCccccCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGR-LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP--YNLTIHWHGIFQLLSAWADGPS 97 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 97 (566)
..+++++|+|++++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||.+
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 3568899999999999888 799999999999999999999999999999999986 589999999863 48987
Q ss_pred CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchh---hcc-cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHH
Q 008422 98 MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM---LRA-TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIID 173 (566)
Q Consensus 98 ~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~---~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (566)
..+ .|.||++++|+|++ +++||||||||.++ +.. ||+|+|||++++. ++.+|+|++++++||++.....
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 644 49999999999998 88999999999854 222 9999999998752 3357899999999999865210
Q ss_pred H-------HHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEe
Q 008422 174 V-------AKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAI 246 (566)
Q Consensus 174 ~-------~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~ 246 (566)
. ..... + ..++.++|||+.+++. ..+.+++++|++|||||+|+|+...+.|||+||+|+||+.
T Consensus 182 ~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~-----~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~ 251 (327)
T 1kbv_A 182 AQGLQPFDMDKAV--A---EQPEYVVFNGHVGALT-----GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYV 251 (327)
T ss_dssp CCEEECBCHHHHH--H---TCCSEEEETTSTTTTS-----GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred cccccccChhHhc--c---CCCceEEEcCcccCCC-----CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEc
Confidence 0 00000 1 2467999999965321 1267999999999999999998888999999999999999
Q ss_pred cCCCcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008422 247 DACYTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 247 DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 310 (566)
||.+++|+.++++.|+||||+||+|+++ .+|.|+|+|+....+. .....|+++|++..
T Consensus 252 DG~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~-----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 252 EGGKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAF-----NKGALGQLKVEGAE 309 (327)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHH-----HSSCEEEEEEESCC
T ss_pred CCCcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccc-----cCCcEEEEEECCCC
Confidence 9999999999999999999999999999 5899999999876531 12368999998754
No 24
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=7.4e-48 Score=385.93 Aligned_cols=239 Identities=26% Similarity=0.385 Sum_probs=207.9
Q ss_pred CceEEEEEEEEEEEeccC-ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCC
Q 008422 23 AAIVEHTFHVKNLTIGRL-CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQ 101 (566)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq 101 (566)
..+++|+|++++...... |+.+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+|+++|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccc
Confidence 457899999999987765 99999999999999999999999999999999999999999999973 45899999999
Q ss_pred CcCCCCCeeEEEEEeCCCCcceeEeecchhh---c-ccceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHH
Q 008422 102 CPITPGNSYTYKFRIVNQEGTLWWHAHFSML---R-ATVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQ 177 (566)
Q Consensus 102 ~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 177 (566)
|+|+||++++|+|++ +++||||||||..+. . .||+|+|||+++... +..|+|++|+++||+.++
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC-------
Confidence 999999999999998 899999999999752 2 399999999988753 246799999999998762
Q ss_pred HHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCc-eEEEEEcCCeEEEEEecCCCc-CcEE
Q 008422 178 AQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNN-QLFFKIANHNFTVVAIDACYT-EPYV 255 (566)
Q Consensus 178 ~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~-~p~~ 255 (566)
+ ..++.++|||+.+.+ ..+.+++++|++|||||+|++... .+.|||+||.|+|++ +|..+ .|..
T Consensus 177 ----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~~ 242 (288)
T 3gdc_A 177 ----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSEY 242 (288)
T ss_dssp ----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSEE
T ss_pred ----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCce
Confidence 1 246789999996420 134689999999999999999654 688999999999998 55555 7799
Q ss_pred eeEEEECCCceEEEEEeeCCCCceeEEEeeecccCC
Q 008422 256 TDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 256 ~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~ 291 (566)
+|++.|.||||++|+++++ .||.|.++||......
T Consensus 243 ~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~~H~~ 277 (288)
T 3gdc_A 243 TDTISQVQGQRGILELRFP-YPGKFMFHAHKTEFAE 277 (288)
T ss_dssp ESEEEEETTCEEEEEECCC-SCEEEEEECSSHHHHT
T ss_pred eeEEEeCCCceEEEEEECC-CCEEEEEEecChHHHh
Confidence 9999999999999999999 7999999999876543
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.2e-46 Score=436.67 Aligned_cols=400 Identities=14% Similarity=0.155 Sum_probs=264.3
Q ss_pred ceeEEEEEECCCCCC--CeEEEecCCEEEEEEEeCCCCceeEEEeCccccC-CCCCCCCCCCCCCcCCCCCeeEEEEEeC
Q 008422 41 CRQQTITAVNGSLPG--PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLL-SAWADGPSMITQCPITPGNSYTYKFRIV 117 (566)
Q Consensus 41 g~~~~~~~~NG~~pG--P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~~~~DG~~~vtq~~i~PG~~~~Y~f~~~ 117 (566)
|..+.+.++||++|| |.|++++||+|+|+|.|. .+.+||||+++.+ +.|+||++.+| |+|.||.+++|+|++
T Consensus 615 ~~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~- 689 (1065)
T 2j5w_A 615 QESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP- 689 (1065)
T ss_dssp HHHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-
T ss_pred cccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-
Confidence 357899999999999 889999999999999975 4459999999999 89999999999 999999999999998
Q ss_pred CCCcceeEeecchhhcc-cceeEEEEeCCCCCCCCCCCCCcceeEEe----ceecccCHHHHHHHHH-hcCCCCCCCceE
Q 008422 118 NQEGTLWWHAHFSMLRA-TVHGALIIRPRSGHKYPFPKPNKEVPIIL----GEWWNADIIDVAKQAQ-ATGGGPNISDAY 191 (566)
Q Consensus 118 ~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~ 191 (566)
.++||||||||...++. ||.|.++|++......++.+++.|.++++ +||++.....+..+.. ..+.. +...
T Consensus 690 ~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~ 766 (1065)
T 2j5w_A 690 DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNA 766 (1065)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCT
T ss_pred CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccce
Confidence 89999999999998776 99999999987655455556788999999 8999987655433221 11221 2223
Q ss_pred EEcCCCCC----------------CCCC----------CCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEE
Q 008422 192 TINGRPGD----------------LYPC----------SQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVA 245 (566)
Q Consensus 192 liNG~~g~----------------~~~~----------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via 245 (566)
++|+.... .+.. .+-..|.|++++|+++++|++|... ..+.+|.||.. +..
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~--~~~ 843 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQ--TES 843 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCB--CSC
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecccc--ccC
Confidence 33432110 0111 0224589999999999999999964 45557777743 332
Q ss_pred ecCCCcCcEEeeEEEECCCceEEEEEeeCCC---------CceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCC
Q 008422 246 IDACYTEPYVTDVVVIAPGQTTDVLLKADQP---------VGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLM 316 (566)
Q Consensus 246 ~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~---------~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~ 316 (566)
. | ...+.||++++..+...+. +|.||++++...... ...+ ..+.|.+..... +
T Consensus 844 ~-~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q--~~~G--L~G~liV~~~~~----l 905 (1065)
T 2j5w_A 844 S-T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD--LYSG--LIGPLIVCRRPY----L 905 (1065)
T ss_dssp S-C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH--HHTT--CEEEEEEECCC------
T ss_pred C-C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh--hhcc--ccceeEecCccc----c
Confidence 2 2 1246799998887776532 369999988542111 0011 223333332110 0
Q ss_pred CCCCCCCCCCcccccccccccCCCCCCCCCCCCCcceEEEEEec-cccccCCCCCccccCCCCeeeEeeccccccC-CCC
Q 008422 317 PVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVDEHMFVTVG-LGLDRCPANATCQGVNGQRNSASMNNHSFQP-PTS 394 (566)
Q Consensus 317 p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~ 394 (566)
. . . ..+ .+..+.+.+. ++. +. .+....|+.++.. |..
T Consensus 906 ~----~----------------~------~~~--~d~D~~l~~~~~d~------------~~-~~y~~~n~~~~~~~P~~ 944 (1065)
T 2j5w_A 906 K----V----------------F------NPR--RKLEFALLFLVFDE------------NE-SWYLDDNIKTYSDHPEK 944 (1065)
T ss_dssp -----------------------------CCC--CEEEEEEEEEEEEG------------GG-STTHHHHHHHHCSCGGG
T ss_pred c----c----------------c------CCC--cceEEEEEEEeecC------------Cc-ceeeccCcccccCCccc
Confidence 0 0 0 001 1112211111 100 00 0000122222221 110
Q ss_pred cchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCC
Q 008422 395 LSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGF 474 (566)
Q Consensus 395 ~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~ 474 (566)
.+++...+.. .+..+.+++ ........+.++.|++|+|+|.|.+. ..+.||||||||
T Consensus 945 v~~~~~~~~~------------~~~~~~iNG----------~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~ 1001 (1065)
T 2j5w_A 945 VNKDDEEFIE------------SNKMHAING----------RMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGH 1001 (1065)
T ss_dssp CCTTCHHHHH------------HTEEEEETT----------BCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSC
T ss_pred cCcchhhhhc------------cCceEEECC----------ccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEccc
Confidence 1111100000 000111111 11223456788999999999999752 237899999999
Q ss_pred cEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCC
Q 008422 475 DFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGP 550 (566)
Q Consensus 475 ~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~ 550 (566)
.|+|++++ |.+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|+|.+..
T Consensus 1002 ~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1002 SFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp CEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred EEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 99998652 579999999999999999999999999999999999999999999998654
No 26
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.1e-44 Score=385.75 Aligned_cols=265 Identities=19% Similarity=0.272 Sum_probs=219.3
Q ss_pred cCCceEEEEEEEEEEEecc-CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CceeEEEeCccccCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGR-LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP--YNLTIHWHGIFQLLSAWADGPS 97 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 97 (566)
..+.+++|+|++++..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.+ +||.+
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 4578899999999999885 799999999999999999999999999999999985 599999999874 48887
Q ss_pred CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchh---hcc-cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHH
Q 008422 98 MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM---LRA-TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIID 173 (566)
Q Consensus 98 ~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~---~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (566)
..+ +|.||++++|+|++ +++||||||||.+. +.. ||+|+|||++++. ++.+|+|++|+++||++.....
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~----~~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG----LAPVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC----CCCCCceEEEEeeeeeccCccc
Confidence 654 59999999999998 88999999998643 333 9999999998753 2357899999999999865310
Q ss_pred H-----HHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecC
Q 008422 174 V-----AKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDA 248 (566)
Q Consensus 174 ~-----~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG 248 (566)
. .......+ ..+++++|||+.+... ..+.+++++|++|||||+|+|....+.|||+||.|+||+.||
T Consensus 172 ~~~~~~~~~~~~~~---~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG 243 (442)
T 2zoo_A 172 EAGLQPFDMAKAID---EDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEG 243 (442)
T ss_dssp CCEEECBCHHHHHT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGG
T ss_pred ccccccCChhHhcc---CCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCC
Confidence 0 00000011 3568999999954210 126799999999999999999888899999999999999999
Q ss_pred CCcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCC
Q 008422 249 CYTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATT 311 (566)
Q Consensus 249 ~~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 311 (566)
.+++|..++++.|.||||+||+|+++ .+|.|+++|+...... .....++++|.+...
T Consensus 244 ~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~-----~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 244 GSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAF-----NKGALAMLKVEGPDD 300 (442)
T ss_dssp SSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHH-----TTSCEEEEEEESCCC
T ss_pred ccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEeccccccc-----ccCceEEEEecCCCC
Confidence 99999999999999999999999999 5899999999876521 124689999987653
No 27
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.2e-44 Score=360.44 Aligned_cols=239 Identities=20% Similarity=0.311 Sum_probs=199.2
Q ss_pred cCCceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMIT 100 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vt 100 (566)
..+.+|+|+|++++.. .+.....+++|||++|||+||+++||+|+|+|+|.++++++|||||+++.. ++||++ ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CC
Confidence 4678999999999864 344445677899999999999999999999999999999999999999976 479999 89
Q ss_pred CCcCCCCCeeEEEEEeCC------------CCcceeEeecchhh------cc-cceeEEEEeCCCCCCCCCCCCCcceeE
Q 008422 101 QCPITPGNSYTYKFRIVN------------QEGTLWWHAHFSML------RA-TVHGALIIRPRSGHKYPFPKPNKEVPI 161 (566)
Q Consensus 101 q~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~~~------~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l 161 (566)
||+|.||++++|+|++.+ ++||||||||.++. .. ||+|+|||+++... ..|+|++|
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEE
Confidence 999999999999999943 37999999999752 22 99999999998753 24899999
Q ss_pred EeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeE
Q 008422 162 ILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNF 241 (566)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 241 (566)
++++| +|||+... ..+.++++.|++|||||+|.+. ..+.||||||.|
T Consensus 153 ~l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~-~~Hp~HlHG~~f 199 (276)
T 3kw8_A 153 VFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 199 (276)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Eeccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCC-cceeEEEcccee
Confidence 88553 89999542 5688999999999999999997 467799999999
Q ss_pred EEEEecCCCc----CcEEeeEEEECCCceEEEEEeeCC--CCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008422 242 TVVAIDACYT----EPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 309 (566)
Q Consensus 242 ~via~DG~~~----~p~~~d~~~l~pgeR~dv~v~~~~--~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 309 (566)
.+++ ||... .+..+|++.|.|||++++.+++++ +||.|+++||...... ....+.+++...
T Consensus 200 ~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~------~GM~g~~~V~~~ 266 (276)
T 3kw8_A 200 ADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKP 266 (276)
T ss_dssp ESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred EEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhh------CCCeEEEEEeCC
Confidence 9975 77543 246899999999999999999985 6999999999865433 134566666543
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.2e-44 Score=366.66 Aligned_cols=239 Identities=19% Similarity=0.326 Sum_probs=199.6
Q ss_pred cCCceEEEEEEEEEEEeccCce-eEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGRLCR-QQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
+.+.+++++|.+++. ++|. .+.++..||++|||+|||++||+|+|+|+|.+++++||||||+++... +||++ +
T Consensus 9 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~-~ 82 (313)
T 3tas_A 9 AGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK-Q 82 (313)
T ss_dssp CCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-T
T ss_pred CCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-c
Confidence 467889999987643 4553 355677899999999999999999999999999999999999998754 69998 5
Q ss_pred CCCcCCCCCeeEEEEEeC------------CCCcceeEeecchhhc-------ccceeEEEEeCCCCCCCCCCCCCccee
Q 008422 100 TQCPITPGNSYTYKFRIV------------NQEGTLWWHAHFSMLR-------ATVHGALIIRPRSGHKYPFPKPNKEVP 160 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~ 160 (566)
+||+|.||++++|+|++. .++||||||||..++. .||+|+|||+++.+. .+|+|++
T Consensus 83 ~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~~ 157 (313)
T 3tas_A 83 SRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTHT 157 (313)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEEE
T ss_pred ccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccce
Confidence 899999999999999862 3679999999987652 299999999988753 4689999
Q ss_pred EEeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCe
Q 008422 161 IILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHN 240 (566)
Q Consensus 161 l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~ 240 (566)
|+++|| ++||+.+. ..+.+.++.|++|||||+|++. ..+.|||+||.
T Consensus 158 l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlHGh~ 204 (313)
T 3tas_A 158 IVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHGE-YYHTFHLHGHR 204 (313)
T ss_dssp EEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCC
T ss_pred eeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEecccc-cceeeeecCCe
Confidence 999876 46777542 4578999999999999999995 46779999999
Q ss_pred EEEEEecCCCc---CcEEeeEEEECCCceEEEEEeeCC--CCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008422 241 FTVVAIDACYT---EPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 309 (566)
Q Consensus 241 ~~via~DG~~~---~p~~~d~~~l~pgeR~dv~v~~~~--~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 309 (566)
|++++.||... .|..+|++.|.||||++++|.+.+ +||.|+++||...... .+..+++.++..
T Consensus 205 F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~------~GM~~~f~V~~~ 272 (313)
T 3tas_A 205 WADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKP 272 (313)
T ss_dssp EESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred eEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH------CCCeEEEEEECC
Confidence 99999998766 478899999999999999998763 6899999999865543 135677777654
No 29
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.7e-44 Score=362.73 Aligned_cols=243 Identities=19% Similarity=0.305 Sum_probs=196.6
Q ss_pred ccccCCceEEEEEEEEEEEeccCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCC
Q 008422 18 STLASAAIVEHTFHVKNLTIGRLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPS 97 (566)
Q Consensus 18 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~ 97 (566)
.+++.+.+++|+|.+++..... ..+.++.+||++|||+|||++||+|+|+|+|.+++++||||||+++... +||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc
Confidence 3446788999999999875222 3345566799999999999999999999999999999999999998754 69996
Q ss_pred CCCCCcCCCCCeeEEEEEeC------------CCCcceeEeecchhhc-------ccceeEEEEeCCCCCCCCCCCCCcc
Q 008422 98 MITQCPITPGNSYTYKFRIV------------NQEGTLWWHAHFSMLR-------ATVHGALIIRPRSGHKYPFPKPNKE 158 (566)
Q Consensus 98 ~vtq~~i~PG~~~~Y~f~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 158 (566)
++||+|+||++++|+|+++ .++||||||||..++. .||+|+|||+++.+. .+|+|
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 8999999999999999984 2689999999987643 199999999988753 46899
Q ss_pred eeEEeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcC
Q 008422 159 VPIILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIAN 238 (566)
Q Consensus 159 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g 238 (566)
+++++++| .+||+... ..+.++++.|++|||||+|++.. .+.|||+|
T Consensus 172 ~~l~~~~~-------------------------~~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHG 218 (299)
T 3t9w_A 172 FTVVFNDM-------------------------MINNRAHH-------DAPTFEANLGERVEWIAIGHGSN-FHTFHLHG 218 (299)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCEEEEETTCEEEEEEEEESSC-CCEEEETT
T ss_pred ceeeeeee-------------------------eecCcccc-------ccccceecCCCEEEEEEEecccc-ceeeeEec
Confidence 99998654 47888542 56889999999999999999965 46799999
Q ss_pred CeEEEEEecCCCcC---cEEeeEEEECCCceEEEEEeeCC--CCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008422 239 HNFTVVAIDACYTE---PYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 309 (566)
Q Consensus 239 h~~~via~DG~~~~---p~~~d~~~l~pgeR~dv~v~~~~--~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 309 (566)
|.|+++..|+.... +..+|++.|.||||++++|.+.+ +||.|+++||...... ....+++.+...
T Consensus 219 h~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~------~GM~~~f~V~~~ 288 (299)
T 3t9w_A 219 HRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD------MGMAGMFLVRNA 288 (299)
T ss_dssp CCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred ceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh------cCCeEEEEEECC
Confidence 99999999887663 45789999999999999887653 6899999999865443 135666666544
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=1.2e-43 Score=363.44 Aligned_cols=266 Identities=20% Similarity=0.206 Sum_probs=209.8
Q ss_pred cCCceEEEEEEEEEEEecc-CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGR-LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
..+++++|+|++++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+++
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~ 104 (333)
T 1mzy_A 28 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL 104 (333)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce
Confidence 4568999999999999887 4999999999999999999999999999999998 57899999998765445666666
Q ss_pred CCCcCCCCCeeEEEEEeCCCCcceeEeecchh-----hcc-cceeEEEEeCCCCCCCC---CCCCCcceeEEeceecccC
Q 008422 100 TQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM-----LRA-TVHGALIIRPRSGHKYP---FPKPNKEVPIILGEWWNAD 170 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~-----~~~-Gl~G~liV~~~~~~~~~---~~~~~~e~~l~~~d~~~~~ 170 (566)
++ |.||++++|+|++ +++||||||||.++ +.. ||+|++||++++..+.+ ...+|+|++|+++||++..
T Consensus 105 ~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~ 181 (333)
T 1mzy_A 105 TL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPK 181 (333)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCc
Confidence 65 9999999999998 88999999999974 333 99999999987542211 1246899999999998831
Q ss_pred --HH---------HHH-H--HHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEE
Q 008422 171 --II---------DVA-K--QAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKI 236 (566)
Q Consensus 171 --~~---------~~~-~--~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l 236 (566)
.. ... . ..+ .+ ..++.++|||+.+++. ..+.+++++|++||||++|++....+ ..+
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i 251 (333)
T 1mzy_A 182 DEDGTYMRFSDPSEGYEDMVAVM-DT---LIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLI 251 (333)
T ss_dssp CTTSCBCCCSSHHHHHHHHHHHH-TT---TCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEE
T ss_pred cccccccccccccccccchhHHh-hc---cCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEE
Confidence 10 000 0 011 11 4568999999965321 14679999999888877766544434 348
Q ss_pred cCCeEEEEEecCCCcC-cE-EeeEEEECCCceEEEEEeeCCCCceeEEEeeecccC-CCCCCCCcceEEEEEEcCCC
Q 008422 237 ANHNFTVVAIDACYTE-PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA-PQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 237 ~gh~~~via~DG~~~~-p~-~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~-~~~~~~~~~~~ail~y~~~~ 310 (566)
++|.|+|++ ||.+++ |. .+|++.|.||||+||+|+++ .+|+|+++||..... . .+..++++|++..
T Consensus 252 ~~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~------~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 252 GGHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVH------KGATAHVLVEGEW 320 (333)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHT------TCCEEEEEEESCC
T ss_pred CCCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhh------CCCEEEEEEcCCC
Confidence 899999999 999995 44 58999999999999999999 589999999997643 2 2467899998753
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.7e-42 Score=355.55 Aligned_cols=267 Identities=22% Similarity=0.267 Sum_probs=202.0
Q ss_pred CCceEEEEEEEEEEEec--cCceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCC
Q 008422 22 SAAIVEHTFHVKNLTIG--RLCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 22 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
.+++++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.+
T Consensus 29 ~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~~ 105 (336)
T 1oe1_A 29 GPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAKL 105 (336)
T ss_dssp CCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGGG
T ss_pred CCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcce
Confidence 46789999999999865 5599999999999999999999999999999999974 345555555444456776677
Q ss_pred CCCcCCCCCeeEEEEEeCCCCcceeEeecchhh----c-ccceeEEEEeCCCCCCCCC---CCCCcceeEEeceecccCH
Q 008422 100 TQCPITPGNSYTYKFRIVNQEGTLWWHAHFSML----R-ATVHGALIIRPRSGHKYPF---PKPNKEVPIILGEWWNADI 171 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~~~~ 171 (566)
++ |.||++++|+|++ +++||||||||.++. . .||+|+|||+++++...+. ..+|+|++|+++||++...
T Consensus 106 ~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~~ 182 (336)
T 1oe1_A 106 TN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPKG 182 (336)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCBC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeeccc
Confidence 65 9999999999998 889999999999753 2 3999999999876432111 2468999999999987411
Q ss_pred --HHH---------HHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEE-EEcCC
Q 008422 172 --IDV---------AKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFF-KIANH 239 (566)
Q Consensus 172 --~~~---------~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~-~l~gh 239 (566)
..+ ....... .....++.++|||+.+.+. ..+.+++++|++||| +|++..+.+.+ +|+||
T Consensus 183 ~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~gh 254 (336)
T 1oe1_A 183 PDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIGGH 254 (336)
T ss_dssp TTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETTCC
T ss_pred cCCceeecccccccccchhhH-hhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEECCc
Confidence 000 0000000 0013567999999964221 147899999997765 66665555444 46999
Q ss_pred eEEEEEecCCCcCcE--EeeEEEECCCceEEEEEeeCCCCceeEEEeeecccC-CCCCCCCcceEEEEEEcCCC
Q 008422 240 NFTVVAIDACYTEPY--VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA-PQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 240 ~~~via~DG~~~~p~--~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~-~~~~~~~~~~~ail~y~~~~ 310 (566)
.|+|++ ||.+++|. .++++.|+||||+||+|+++ .+|.|+++||..... . ....|+++|++..
T Consensus 255 ~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~------~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 255 GDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFE------LGAAGHIKVEGKW 320 (336)
T ss_dssp EEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHT------TSCEEEEEEESCC
T ss_pred CceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhcccc------CCCeEEEEECCCC
Confidence 999997 99999653 46999999999999999999 489999999987542 2 2467899998754
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=2e-42 Score=355.69 Aligned_cols=268 Identities=20% Similarity=0.258 Sum_probs=204.7
Q ss_pred cCCceEEEEEEEEEEEeccC--ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCC
Q 008422 21 ASAAIVEHTFHVKNLTIGRL--CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSM 98 (566)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~~--g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 98 (566)
..+++++|+|++++..++.+ |+.+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||...
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 45788999999999997754 9999999999999999999999999999999998 678999998765443345455
Q ss_pred CCCCcCCCCCeeEEEEEeCCCCcceeEeecchh----hc-ccceeEEEEeCCCCCC----CCCCCCCcceeEEeceeccc
Q 008422 99 ITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM----LR-ATVHGALIIRPRSGHK----YPFPKPNKEVPIILGEWWNA 169 (566)
Q Consensus 99 vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~~ 169 (566)
++| |.||++++|+|++ .++||||||||.++ +. .||+|+|||+++++.. .+. .+|+|++|+++||++.
T Consensus 111 ~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 111 LTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred ceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 554 9999999999998 78999999999975 33 3999999999875321 121 4688999999999973
Q ss_pred --CH---------HHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcC
Q 008422 170 --DI---------IDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIAN 238 (566)
Q Consensus 170 --~~---------~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g 238 (566)
.. .......... .....++.++|||+.+.. ...+.+++++|+++||++.|.+...++ .++++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~-----~~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~g 259 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL-----TGDHALTAAVGERVLVVHSQANRDTRP-HLIGG 259 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT-----SGGGCEEEETTCEEEEEEEESSSCBCE-EEETC
T ss_pred cccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc-----cCCCceEcCCCCEEEEEECCCCCccce-EEecC
Confidence 11 0000000000 001356799999996421 014789999999887766665544444 45899
Q ss_pred CeEEEEEecCCCc-CcE-EeeEEEECCCceEEEEEeeCCCCceeEEEeeecc-cCCCCCCCCcceEEEEEEcCCC
Q 008422 239 HNFTVVAIDACYT-EPY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA-SAPQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 239 h~~~via~DG~~~-~p~-~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~-~~~~~~~~~~~~~ail~y~~~~ 310 (566)
|.|+|++ ||.++ .|. .+|++.|.||||+||+|+++ ++|.|+++||... ... .+..++++|++..
T Consensus 260 h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~------~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 260 HGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFE------LGAAGHFKVTGEW 326 (340)
T ss_dssp CEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHT------TSCEEEEEEESCC
T ss_pred cceEEeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHh------CCCEEEEEECCCC
Confidence 9999997 99988 454 58999999999999999999 4899999999873 222 1357899998754
No 33
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=2.9e-40 Score=367.06 Aligned_cols=253 Identities=14% Similarity=0.164 Sum_probs=186.4
Q ss_pred CCceEEEEEEEEEEEeccC-------------c-eeEE--EEEE----------------CCCCCCCeEEEecCCEEEEE
Q 008422 22 SAAIVEHTFHVKNLTIGRL-------------C-RQQT--ITAV----------------NGSLPGPTIRVHEGDTLIVH 69 (566)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~--~~~~----------------NG~~pGP~i~~~~Gd~v~v~ 69 (566)
.+++|+|.+.+++..+... | +.+. .+.| ++++|||+|+|++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4788999999999986433 2 2222 2233 34789999999999999999
Q ss_pred EEeCCCCceeEEEeCccccCCCCCCCCCCCC--------CCcCCCCCeeEEEEEeCCC-----Cc----ceeEeecchhh
Q 008422 70 VFNKSPYNLTIHWHGIFQLLSAWADGPSMIT--------QCPITPGNSYTYKFRIVNQ-----EG----TLWWHAHFSML 132 (566)
Q Consensus 70 v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vt--------q~~i~PG~~~~Y~f~~~~~-----~G----t~wYH~H~~~~ 132 (566)
|+|.++++++|||||+++.. ++||+|+++ ||+|+||++++|+|+++++ +| |||||||.+..
T Consensus 83 ~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 99999999999999999864 479999876 9999999999999999543 57 99999999753
Q ss_pred c--c-cceeEEEEeCCCCCCC--CCCCCCcceeEEec------eecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCC
Q 008422 133 R--A-TVHGALIIRPRSGHKY--PFPKPNKEVPIILG------EWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLY 201 (566)
Q Consensus 133 ~--~-Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~ 201 (566)
. . ||+|+|||+++..... ..+..++|++|+++ ||+++.......... .......++.++|||+..
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~--- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-SSEVKNSHEFHAINGMIY--- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS---
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-CcchhhcCceeccCCEec---
Confidence 3 3 9999999998764321 12234689999998 677664322100000 111123568999999953
Q ss_pred CCCCCCeeEEEEECCcEEEEEEEecccCc-eEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCCCCcee
Q 008422 202 PCSQNQTYTLKVETGKTYLLRIINAALNN-QLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQPVGSY 280 (566)
Q Consensus 202 ~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y 280 (566)
..|.+++++|++|||||+|+++.. .+.||||||.|++++.|| ..+|++.|.||||+||+|+++ ++|.|
T Consensus 237 -----~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG~w 305 (647)
T 1sdd_B 237 -----NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPGWW 305 (647)
T ss_dssp -----CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSEEE
T ss_pred -----CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cceEe
Confidence 247899999999999999999764 788999999999999886 478999999999999999999 58999
Q ss_pred EEEeeecccCC
Q 008422 281 YMAARAYASAP 291 (566)
Q Consensus 281 ~~~~~~~~~~~ 291 (566)
+++||......
T Consensus 306 ~~hch~~~h~~ 316 (647)
T 1sdd_B 306 LLDTEVGEIQR 316 (647)
T ss_dssp EEECCCHHHHT
T ss_pred ecccCcccccc
Confidence 99999865543
No 34
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=4.7e-40 Score=336.52 Aligned_cols=237 Identities=19% Similarity=0.298 Sum_probs=192.2
Q ss_pred CCceEEEEEEEEEEEeccCceeEE-EEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCC
Q 008422 22 SAAIVEHTFHVKNLTIGRLCRQQT-ITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMIT 100 (566)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vt 100 (566)
.+++++|+|++++. ++|.... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-cc
Confidence 45779999999875 3453322 2235899999999999999999999999999999999999987 3579999 89
Q ss_pred CCcCCCCCeeEEEEEeCC------------CCcceeEeecchh------hcc-cceeEEEEeCCCCCCCCCCCCCcceeE
Q 008422 101 QCPITPGNSYTYKFRIVN------------QEGTLWWHAHFSM------LRA-TVHGALIIRPRSGHKYPFPKPNKEVPI 161 (566)
Q Consensus 101 q~~i~PG~~~~Y~f~~~~------------~~Gt~wYH~H~~~------~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l 161 (566)
||+|.||++++|+|++.. ++|+||||||..+ +.. ||+|++||+++.+. .+|+|+++
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEE
Confidence 999999999999999832 3589999999743 223 99999999988653 25789999
Q ss_pred EeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeE
Q 008422 162 ILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNF 241 (566)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~ 241 (566)
+++|| +|||+.+. ..+.++++.||+|||||+|.+. ..+.||||||.|
T Consensus 194 ~~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh~f 240 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGE-YYHTFHMHGHRW 240 (343)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESS-CCEEEEETTCCE
T ss_pred Ecccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCc-cccccEecCcEE
Confidence 88654 79999542 4578999999999999999996 567799999999
Q ss_pred EEEEecCCCcC----cEEeeEEEECCCceEEEEEeeC--CCCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008422 242 TVVAIDACYTE----PYVTDVVVIAPGQTTDVLLKAD--QPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 309 (566)
Q Consensus 242 ~via~DG~~~~----p~~~d~~~l~pgeR~dv~v~~~--~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 309 (566)
+++ .||.+.. +..+|++.|.|||+++++++++ ++||.|+++||...... ....+++.+...
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~------~GM~g~~~V~~~ 307 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKP 307 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHh------ccCcEEEEEecC
Confidence 997 4675442 4678999999999999999974 37999999999865433 235677777653
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=6.3e-39 Score=342.10 Aligned_cols=260 Identities=22% Similarity=0.326 Sum_probs=210.0
Q ss_pred CceEEEEEEEEEEEecc-CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CceeEEEeCccccCCCCCCCCCCC
Q 008422 23 AAIVEHTFHVKNLTIGR-LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP--YNLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 23 ~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~--~~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
+..++|+|++++..... +|....+|+|||++|||+|++++||+++|+|+|.++ ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45678888887777666 589999999999999999999999999999999975 679999999853 4998866
Q ss_pred CCCcCCCCCeeEEEEEeCCCCcceeEeecch---hhc-ccceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHH--
Q 008422 100 TQCPITPGNSYTYKFRIVNQEGTLWWHAHFS---MLR-ATVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIID-- 173 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~-- 173 (566)
++ |.||++++|.|++ +++|+||||||.. .+. .||+|+|+|+++.. ++..|+|++++++||+......
T Consensus 236 ~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 TQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp CC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred EE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 54 9999999999998 7899999999974 222 39999999997652 2357889999999998653100
Q ss_pred ----HHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCC
Q 008422 174 ----VAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDAC 249 (566)
Q Consensus 174 ----~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~ 249 (566)
....... + ..++.++|||+..++. ..+.+++++|++|||||+|++....+.|||+||.|+||+.||.
T Consensus 309 g~~~~~~~~~~-~---~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~ 379 (447)
T 2dv6_A 309 GEQEMDYEKLI-N---EKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGS 379 (447)
T ss_dssp EECCBBHHHHH-T---TCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGC
T ss_pred ccccCChHHhh-c---cCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCc
Confidence 0000011 1 2457899999965321 1257899999999999999998888899999999999999999
Q ss_pred CcC-cE-EeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008422 250 YTE-PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAT 310 (566)
Q Consensus 250 ~~~-p~-~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 310 (566)
++. |. .+|++.|.||||++|+++++ ++|.|+|+||...... .+..++++|++..
T Consensus 380 ~~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~~------~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 380 VVSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRLE------HGLVGFLNVDGPK 435 (447)
T ss_dssp SSSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGGG------GTCCEEEEECSCS
T ss_pred ccCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCccc------cCCEEEEEEeCCC
Confidence 994 54 58999999999999999999 6899999999876533 2357999998753
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=8.1e-42 Score=345.08 Aligned_cols=216 Identities=18% Similarity=0.228 Sum_probs=159.6
Q ss_pred EEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCC------C--CCcCCCCCeeEEEEEe
Q 008422 45 TITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMI------T--QCPITPGNSYTYKFRI 116 (566)
Q Consensus 45 ~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~v------t--q~~i~PG~~~~Y~f~~ 116 (566)
...++| ++|||+|+|++||+|+|+|+|.++++++|||||++.... +||++.. + ||+|+||++++|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 344578 589999999999999999999999999999999996543 4666643 3 7999999999999998
Q ss_pred CCC---------CcceeEeecchhhc--c-cceeEEEEeCCCCCC-CC-CCCCCcceeEEeceecccCHHHHHHHHHhcC
Q 008422 117 VNQ---------EGTLWWHAHFSMLR--A-TVHGALIIRPRSGHK-YP-FPKPNKEVPIILGEWWNADIIDVAKQAQATG 182 (566)
Q Consensus 117 ~~~---------~Gt~wYH~H~~~~~--~-Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g 182 (566)
+++ +||||||||....+ . ||+|+|||+++.... .+ ....|+|++++++||..... .
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~---------~- 196 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS---------W- 196 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS---------S-
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc---------c-
Confidence 543 37999999987643 3 999999999875321 11 12467899999999853211 0
Q ss_pred CCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccC-ceEEEEEcCCeEEEEEecCCCcCcEEeeEEEE
Q 008422 183 GGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALN-NQLFFKIANHNFTVVAIDACYTEPYVTDVVVI 261 (566)
Q Consensus 183 ~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l 261 (566)
....++.++|||+... ..|.+++++|++|||||+|+|.. ..+.||||||.|.+ || ..+|++.|
T Consensus 197 -~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~l 260 (306)
T 1sdd_A 197 -NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAITL 260 (306)
T ss_dssp -SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCCE
T ss_pred -ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEEE
Confidence 1124678999999531 34789999999999999999986 56789999999986 77 46899999
Q ss_pred CCCceEEEEEeeCCCCceeEEEeeecccC
Q 008422 262 APGQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 262 ~pgeR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
.||||+||+++++ ++|.|+++||.....
T Consensus 261 ~pger~~v~~~~~-~pG~~~~hch~~~H~ 288 (306)
T 1sdd_A 261 VSATSTTANMTVS-PEGRWTIASLIPRHF 288 (306)
T ss_dssp ETTCCBC---------CCCCCBCCSTTTG
T ss_pred CCCcEEEEEEEcC-CCeEEEEEeCChHHH
Confidence 9999999999998 689999999986543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=1.8e-40 Score=370.63 Aligned_cols=250 Identities=12% Similarity=0.112 Sum_probs=196.1
Q ss_pred CCceEEEEEEEEEEEe--ccCce---------------eEE--EEEE-----CC-----------CCCCCeEEEecCCEE
Q 008422 22 SAAIVEHTFHVKNLTI--GRLCR---------------QQT--ITAV-----NG-----------SLPGPTIRVHEGDTL 66 (566)
Q Consensus 22 ~~~~~~~~l~~~~~~~--~~~g~---------------~~~--~~~~-----NG-----------~~pGP~i~~~~Gd~v 66 (566)
.+.+|+|.|.+++..+ +++|. .+. .+.| ++ ++|||+|||++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 5789999999999984 55542 122 2223 22 589999999999999
Q ss_pred EEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCC---------CCcceeEeecchhhc--c-
Q 008422 67 IVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVN---------QEGTLWWHAHFSMLR--A- 134 (566)
Q Consensus 67 ~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~---------~~Gt~wYH~H~~~~~--~- 134 (566)
+|+|+|.++++++|||||+++..... ||+++ +||+|+||++|+|+|++++ ++||||||||.+... .
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999998863 69998 9999999999999999853 899999999998743 2
Q ss_pred cceeEEEEeCCCCCCC--CCCCCCcceeEEece------ecccCHHHHHHHHHh-cC-------CCCCCCceEEEcCCCC
Q 008422 135 TVHGALIIRPRSGHKY--PFPKPNKEVPIILGE------WWNADIIDVAKQAQA-TG-------GGPNISDAYTINGRPG 198 (566)
Q Consensus 135 Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~-~g-------~~~~~~~~~liNG~~g 198 (566)
||+|+|||+++..... .....++|++|++++ |+++.... .... .. ......+.++|||+..
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCccC
Confidence 9999999998864321 112457899988754 44432110 0000 00 0011245689999953
Q ss_pred CCCCCCCCCeeEEEEECCcEEEEEEEecccCc-eEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCCCC
Q 008422 199 DLYPCSQNQTYTLKVETGKTYLLRIINAALNN-QLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQPV 277 (566)
Q Consensus 199 ~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~ 277 (566)
...+.+++++|++|||||+|++... .+.||||||.|+|++.||. .+|++.|.||||++|+|+++ +|
T Consensus 365 -------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~p 431 (770)
T 2r7e_B 365 -------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KA 431 (770)
T ss_dssp -------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SC
T ss_pred -------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CC
Confidence 1457789999999999999998653 7889999999999999974 79999999999999999999 68
Q ss_pred ceeEEEeeeccc
Q 008422 278 GSYYMAARAYAS 289 (566)
Q Consensus 278 G~y~~~~~~~~~ 289 (566)
|.|+++||....
T Consensus 432 G~w~~hcH~~~H 443 (770)
T 2r7e_B 432 GIWRVECLIGEH 443 (770)
T ss_dssp BCCCBCCCSHHH
T ss_pred CceEEEeccccc
Confidence 999999998644
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=5.4e-37 Score=342.27 Aligned_cols=218 Identities=20% Similarity=0.285 Sum_probs=169.4
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCC-----CCCCCCCCcCCCCCeeEEEEEeCCCCc-----
Q 008422 52 SLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWAD-----GPSMITQCPITPGNSYTYKFRIVNQEG----- 121 (566)
Q Consensus 52 ~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~D-----G~~~vtq~~i~PG~~~~Y~f~~~~~~G----- 121 (566)
.+|||+||+++||+|+|+|+|.++++++|||||+++. ..|+| |+++++||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999985 45565 566788999999999999999965444
Q ss_pred ----ceeEeecchhhcc---cceeEEEEeCCCCC-CC-CCCCCCcceeEEece------ecccCHHHHHHHHHhc-CCC-
Q 008422 122 ----TLWWHAHFSMLRA---TVHGALIIRPRSGH-KY-PFPKPNKEVPIILGE------WWNADIIDVAKQAQAT-GGG- 184 (566)
Q Consensus 122 ----t~wYH~H~~~~~~---Gl~G~liV~~~~~~-~~-~~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~-g~~- 184 (566)
|||||||.+.+.+ ||+|+|||+++... +. .....|+|++|++++ |++.... ...... ...
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 9999999988653 99999999987532 11 112568999999964 4443211 111100 000
Q ss_pred ------CCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccC-ceEEEEEcCCeEEEEEecCCCcCcEEee
Q 008422 185 ------PNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALN-NQLFFKIANHNFTVVAIDACYTEPYVTD 257 (566)
Q Consensus 185 ------~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d 257 (566)
......++|||+... ..+ +.+++|++|||||+|+|+. ..+.|||+||.|+|+ +..+|
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~-------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~D 667 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD-------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYED 667 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS-------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBC
T ss_pred cccccccccCceeeecCcCCC-------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------cccee
Confidence 001125789999431 223 8999999999999998764 457899999999986 46789
Q ss_pred EEEECCCceEEEEEeeCCCCceeEEEeeecccC
Q 008422 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 258 ~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
++.|.||||++|+|+++ .+|.|+++||.....
T Consensus 668 tv~l~Pg~~~~v~~~ad-~pG~w~~hcH~~~H~ 699 (742)
T 2r7e_A 668 TLTLFPFSGETVFMSME-NPGLWILGCHNSDFR 699 (742)
T ss_dssp SSCCCCCSSEECCEECC-CCCCSCCEECCCSTT
T ss_pred EEEECCCcEEEEEEEcC-CCeEEEEEeCCchHH
Confidence 99999999999999998 689999999987654
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.96 E-value=9.2e-29 Score=247.36 Aligned_cols=233 Identities=21% Similarity=0.257 Sum_probs=163.5
Q ss_pred CceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceE
Q 008422 188 SDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTT 267 (566)
Q Consensus 188 ~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~ 267 (566)
...+++||+. ..|.|+++.|+++++|+.|.... .+.+|+||.. ..+.||.+- ++...|.||+++
T Consensus 54 ~~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~----~~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRI---------PGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPG----IGAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTT----STTCSBCTTCEE
T ss_pred EEEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCC----ccceeECCCCEE
Confidence 4589999993 45899999999999999999854 5669999976 457899754 234578999999
Q ss_pred EEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCC
Q 008422 268 DVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPV 347 (566)
Q Consensus 268 dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~ 347 (566)
+..++++ .+|+||++||....... .... ..+.+.++..... +
T Consensus 118 ~y~f~~~-~~Gt~~yH~H~~~~~~~-~~~G--l~G~liV~~~~~~----~------------------------------ 159 (288)
T 3gdc_A 118 TYEFDAT-PFGTHLYHCHQSPLAPH-IAKG--LYGGFIVEPKEGR----P------------------------------ 159 (288)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHHH-HHTT--CEEEEEEECSSCC----C------------------------------
T ss_pred EEEEEcC-CCccEEEEecCcchHHH-HhCc--CeEEEEEeCCccC----C------------------------------
Confidence 9999997 78999999998521000 0011 2233333321110 0
Q ss_pred CCCcceEEEEEec-cccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCC
Q 008422 348 PLQVDEHMFVTVG-LGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNT 426 (566)
Q Consensus 348 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 426 (566)
..++.+.+.+. +...+ ......|.+||+.|..
T Consensus 160 --~~d~e~~l~~~d~~~~~----------g~~~~~~~iNG~~~~~----------------------------------- 192 (288)
T 3gdc_A 160 --PADDEMVMVMNGYNTDG----------GDDNEFYSVNGLPFHF----------------------------------- 192 (288)
T ss_dssp --CCSEEEEEEEEEECCSS----------TTCCSEEEETTSTTHH-----------------------------------
T ss_pred --CCcceEEEEEeeEecCC----------CCCcceEEECcccccc-----------------------------------
Confidence 01222222221 11000 0112356777765420
Q ss_pred ccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeE
Q 008422 427 ALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTI 506 (566)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv 506 (566)
....+.++.|++++|.+.|.+. ..+.||||||||.|+|++.+.. +..|.++||+
T Consensus 193 -------------~~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~Dtv 246 (288)
T 3gdc_A 193 -------------MDFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTDTI 246 (288)
T ss_dssp -------------HHSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEESEE
T ss_pred -------------cCcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceeeEE
Confidence 0123567889999999999752 1246999999999999875321 2345799999
Q ss_pred EeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 507 AVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 507 ~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.|+|++.+.|+|++++||.|+||||+++|++.|||..|+|.
T Consensus 247 ~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 247 SQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp EEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred EeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999986
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.95 E-value=3.2e-28 Score=248.88 Aligned_cols=216 Identities=16% Similarity=0.217 Sum_probs=154.3
Q ss_pred CeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCCC----------
Q 008422 207 QTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQP---------- 276 (566)
Q Consensus 207 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~---------- 276 (566)
..|.|++++|+++|+||+|..... ..+|.||..+. .+.||.++ +...|.|||+++..+++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 568999999999999999999654 45899998877 68899864 24468999999999988642
Q ss_pred --CceeEEEeeecccCC--CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCcc
Q 008422 277 --VGSYYMAARAYASAP--QIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVD 352 (566)
Q Consensus 277 --~G~y~~~~~~~~~~~--~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~ 352 (566)
.|.||+++|...... ........+..|++..+. + . .|
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~-------~-----------------------------~---pd 188 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------V-----------------------------L---PD 188 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------C-----------------------------C---CS
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCC-------C-----------------------------C---CC
Confidence 478999998632110 000111223333432211 0 0 02
Q ss_pred eEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCc
Q 008422 353 EHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDS 432 (566)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 432 (566)
+.+.+.+. .|.|||+.+. .
T Consensus 189 ~e~~l~~~--------------------d~~iNG~~~~--~--------------------------------------- 207 (343)
T 3cg8_A 189 ATHTIVFN--------------------DMTINNRKPH--T--------------------------------------- 207 (343)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT--C---------------------------------------
T ss_pred ceEEEEcc--------------------cceecccCCC--C---------------------------------------
Confidence 33332211 2577776431 1
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCc
Q 008422 433 SLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGG 512 (566)
Q Consensus 433 ~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g 512 (566)
...+.++.|++|+|+|.|.+. +.||||||||.|+|+.. |.++. ....+.+|||+.|+|++
T Consensus 208 --------~~~l~v~~Ge~vri~l~N~g~---~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~ 267 (343)
T 3cg8_A 208 --------GPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPAD 267 (343)
T ss_dssp --------CCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTC
T ss_pred --------CccEEeCCCCEEEEEEEcCCc---cccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCC
Confidence 134678899999999999764 79999999999999743 32221 01235689999999999
Q ss_pred EEEEEEEe---cCceeEEEEeecccccccccEEEEEEecC
Q 008422 513 WAVIRFRA---NNPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 513 ~~virf~a---dnpG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
++.++|++ +|||.|+||||+++|++.|||.+|+|.+.
T Consensus 268 ~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~ 307 (343)
T 3cg8_A 268 SFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 307 (343)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred EEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecC
Confidence 99999995 89999999999999999999999999754
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.95 E-value=1.9e-27 Score=240.71 Aligned_cols=247 Identities=17% Similarity=0.222 Sum_probs=162.5
Q ss_pred ceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEE-EEecCCCcCcEEeeEEEECCCceE
Q 008422 189 DAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTV-VAIDACYTEPYVTDVVVIAPGQTT 267 (566)
Q Consensus 189 ~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~v-ia~DG~~~~p~~~d~~~l~pgeR~ 267 (566)
..+++||+. +.|.|+++.|+++++|+.|... ....+|+||....- .+.||.+- +....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~~~~~DG~p~----~t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTT-LPHTIHWHGMLQRGTWQSDGVPH----ATQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSS-SCBCCEEETCCCTTCGGGSCCBT----TTBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCC-CceeEEecCcCCCCCcccCCCcc----cccccCCCCCEE
Confidence 478999993 5689999999999999999984 45678999986542 36788753 234578999999
Q ss_pred EEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCC
Q 008422 268 DVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPV 347 (566)
Q Consensus 268 dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~ 347 (566)
+..++++ .+|+||++||....... ......+ +++. +..... + .+
T Consensus 89 ~y~f~~~-~~Gt~wYH~H~~~~~~~-~~~Gl~G-~lIV-~~~~~~----~-~~--------------------------- 132 (318)
T 3g5w_A 89 TYKFKAE-PAGTMWYHCHVNVNEHV-TMRGMWG-PLIV-EPKNPL----P-IE--------------------------- 132 (318)
T ss_dssp EEEEECC-SCEEEEEECCSSHHHHH-HHSCCEE-EEEE-ECSSCC----H-HH---------------------------
T ss_pred EEEEEcC-CCEEEEEEccCChhhhh-ccCCCEE-EEEE-cCCCcc----c-cc---------------------------
Confidence 9999998 68999999997421100 0011222 3333 321110 0 00
Q ss_pred CCCcceEEEEEec-cccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCC
Q 008422 348 PLQVDEHMFVTVG-LGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNT 426 (566)
Q Consensus 348 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 426 (566)
...++.+.+.+. ...................-.|.|||+.+.
T Consensus 133 -~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~------------------------------------ 175 (318)
T 3g5w_A 133 -KTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFP------------------------------------ 175 (318)
T ss_dssp -HTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBT------------------------------------
T ss_pred -ccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCC------------------------------------
Confidence 001112111110 000000000000000001123566665431
Q ss_pred ccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeE
Q 008422 427 ALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTI 506 (566)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv 506 (566)
.+..+.++.|++++|+|.|.+. ..||||||||+|+|++...+ .+.+|.+|||+
T Consensus 176 -------------~~~~l~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~~dtv 228 (318)
T 3g5w_A 176 -------------ETQPIRVKKGDVIRLRLIGAGD---HVHAIHTHGHISQIAFKDGF-----------PLDKPIKGDTV 228 (318)
T ss_dssp -------------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTSCEEEEEETTE-----------EEEEEEEESEE
T ss_pred -------------CCccEEeCCCCEEEEEEEeCCC---ceEEEEECCcEEEEEecCCc-----------ccCCCccccEE
Confidence 1134678899999999999764 68999999999999987422 12356789999
Q ss_pred EeCCCcEEEEEEEecCceeEEEEeecccccc------cccEEEEEEecC
Q 008422 507 AVPVGGWAVIRFRANNPGVWFMHCHLDVHLP------WGLATAFVVENG 549 (566)
Q Consensus 507 ~vp~~g~~virf~adnpG~w~~HCHil~H~~------~GM~~~~~V~~~ 549 (566)
.|+|++++.|+|+++|||.|+||||+++|++ .|||..|+|...
T Consensus 229 ~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~ 277 (318)
T 3g5w_A 229 LIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEV 277 (318)
T ss_dssp EECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTT
T ss_pred EECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCC
Confidence 9999999999999999999999999999998 689999998643
No 42
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=1.9e-27 Score=243.35 Aligned_cols=244 Identities=19% Similarity=0.228 Sum_probs=158.6
Q ss_pred CceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEe---cCCCcCcEEeeEEEECCC
Q 008422 188 SDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAI---DACYTEPYVTDVVVIAPG 264 (566)
Q Consensus 188 ~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~---DG~~~~p~~~d~~~l~pg 264 (566)
...+++||+. +.|.|++++|+++|+|++|.+.. ..++|.|| +.+.+. ||.+. ++...|.||
T Consensus 23 ~~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCcc---------CCCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCccCCC
Confidence 3579999993 45899999999999999999854 34455555 556664 99753 344579999
Q ss_pred ceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCC
Q 008422 265 QTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQW 344 (566)
Q Consensus 265 eR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 344 (566)
||+++.++++ .+|+||++||....... ......+ +++. ...... + ++
T Consensus 87 ~~~~y~f~~~-~~Gt~wyH~H~~~~~q~-~~~Gl~G-~liV-~p~~~~----~-~~------------------------ 133 (339)
T 2zwn_A 87 DSYTYKFKAD-RIGTLWYHCHVNVNEHV-GVRGMWG-PLIV-DPKQPL----P-IE------------------------ 133 (339)
T ss_dssp CEEEEEEECC-SCEEEEEECCSSHHHHT-TTSCCEE-EEEE-ECSSCC----T-TG------------------------
T ss_pred CeEEEEEECC-CCEEEEEEecCCchhhh-hcCCceE-eEEe-cCCCcc----c-cc------------------------
Confidence 9999999998 68999999997431110 0012222 2332 221110 0 00
Q ss_pred CCCCCCcceEEEEEec-cccccCCCCCccccCCC-CeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccc
Q 008422 345 VPVPLQVDEHMFVTVG-LGLDRCPANATCQGVNG-QRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFD 422 (566)
Q Consensus 345 ~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~ 422 (566)
...++.+.+.+. ........ ....+... ....|.+||+.+
T Consensus 134 ----~~~d~e~~l~l~d~~~~~~~~-~~~~g~~~~~~~~~~ING~~~--------------------------------- 175 (339)
T 2zwn_A 134 ----KRVTKDVIMMMSTWESAVADK-YGEGGTPMNVADYFSVNAKSF--------------------------------- 175 (339)
T ss_dssp ----GGCSEEEEEEEEEECGGGTTC-TTCCCSTTSCCCEEEETTBCT---------------------------------
T ss_pred ----ccCCceEEEEeeheecccccc-cCCCCCCccccceEEEccccC---------------------------------
Confidence 001112211111 00000000 00000000 012345555432
Q ss_pred cCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCc
Q 008422 423 FTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQR 502 (566)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~ 502 (566)
.....+.++.|++++|+|.|.+. ..||||||||+|+|++...+ .+.+|.+
T Consensus 176 ----------------~~~~~~~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~DG~-----------~~~~p~~ 225 (339)
T 2zwn_A 176 ----------------PLTQPLRVKKGDVVKIRFFGAGG---GIHAMHSHGHDMLVTHKDGL-----------PLDSPYY 225 (339)
T ss_dssp ----------------TSSCCEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEETTE-----------EEEEEEE
T ss_pred ----------------CCcccEEECCCCEEEEEEEeCCC---ceEEEEECCcEEEEEEeCCe-----------ecCCCcE
Confidence 11234678899999999999763 69999999999999987421 1223678
Q ss_pred ceeEEeCCCcEEEEEEEecCceeEEEEeecccc------cccccEEEEEEec
Q 008422 503 RNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVH------LPWGLATAFVVEN 548 (566)
Q Consensus 503 rDTv~vp~~g~~virf~adnpG~w~~HCHil~H------~~~GM~~~~~V~~ 548 (566)
+||+.|+||+++.|+|++||||.|++|||+++| ++.||+.++.+..
T Consensus 226 ~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 226 ADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp ESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred EEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 999999999999999999999999999999999 8899999999864
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=1.8e-27 Score=238.86 Aligned_cols=217 Identities=19% Similarity=0.259 Sum_probs=150.1
Q ss_pred CeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCC-----------
Q 008422 207 QTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQ----------- 275 (566)
Q Consensus 207 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~----------- 275 (566)
+.|+|+++.|+++++++.|... ...++|.||..+. -+.||.++. .-.|.|||++...+++++
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~-~~~siH~HG~~~~-~~~DG~~~~-----~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTD-RVLSLHPHGVDYD-VNSDGTLMN-----GSAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCC-GGGSCCTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCC-CCccEEeCCcccC-CccCCCccc-----cCccCCCCeEEEEEEeecccccCCCcCCC
Confidence 5789999999999999999974 4566899998655 357897651 124789999998888752
Q ss_pred -CCceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCcc
Q 008422 276 -PVGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVD 352 (566)
Q Consensus 276 -~~G~y~~~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~ 352 (566)
.+|.||+++|....... .....+ .+.|....... + ..|
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL--~G~liV~~~~~-----~--------------------------------~~d 169 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGL--YGALVVRRQGD-----L--------------------------------LPK 169 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTC--EEEEEEECTTC-----C--------------------------------CCS
T ss_pred CCceeEEEecCCcccccchhhhcccc--cceEEEecccc-----c--------------------------------Ccc
Confidence 46999999996432210 000112 22222221100 0 013
Q ss_pred eEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCc
Q 008422 353 EHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDS 432 (566)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 432 (566)
+.+.+.+. .|.+|++.+.
T Consensus 170 ~e~~l~~~--------------------~~~~Ng~~~~------------------------------------------ 187 (299)
T 3t9w_A 170 RQFTVVFN--------------------DMMINNRAHH------------------------------------------ 187 (299)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT------------------------------------------
T ss_pred ccceeeee--------------------eeeecCcccc------------------------------------------
Confidence 34433321 2456664321
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCc
Q 008422 433 SLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGG 512 (566)
Q Consensus 433 ~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g 512 (566)
....+.++.|++|+|++.|.+. +.||||||||.|+|+..+... .....+.++||+.|.|+.
T Consensus 188 -------~~p~l~v~~Ge~Vr~~liN~~~---~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe 248 (299)
T 3t9w_A 188 -------DAPTFEANLGERVEWIAIGHGS---NFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGV 248 (299)
T ss_dssp -------CCCEEEEETTCEEEEEEEEESS---CCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTC
T ss_pred -------ccccceecCCCEEEEEEEeccc---cceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCce
Confidence 1245678899999999999764 789999999999998764321 223445689999999986
Q ss_pred E---EEEEEEecCceeEEEEeecccccccccEEEEEEecCC
Q 008422 513 W---AVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENGP 550 (566)
Q Consensus 513 ~---~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~~ 550 (566)
. .+++|+++|||.|+|||||++|++.|||++|+|.+.+
T Consensus 249 ~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 249 SFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 4 5566778899999999999999999999999998643
No 44
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=3.2e-27 Score=234.74 Aligned_cols=223 Identities=15% Similarity=0.224 Sum_probs=157.9
Q ss_pred CeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCC-----------
Q 008422 207 QTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQ----------- 275 (566)
Q Consensus 207 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~----------- 275 (566)
+.|+|+++.|+++++++.|.. ....++|.||..+.. +.||.+ +..-.|.||+++...+++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~-----~t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTA-----MNKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCT-----TTTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCc-----CCcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 679999999999999999997 456678999987654 578975 23346899999999999975
Q ss_pred -CCceeEEEeeecccCC--CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCcc
Q 008422 276 -PVGSYYMAARAYASAP--QIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVD 352 (566)
Q Consensus 276 -~~G~y~~~~~~~~~~~--~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~ 352 (566)
.+|.||+++|...... ......+ .+.|....... + . .|
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl--~G~liV~~~~~-----~-----------------------------~---~d 147 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGL--YGPVIVRRKGD-----V-----------------------------L---PD 147 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTC--EEEEEEECTTC-----C-----------------------------C---CS
T ss_pred CCCEEEEEecCccccccchhhhhCcc--EEEEEEecCCC-----c-----------------------------c---cc
Confidence 2589999999743110 0000112 22222222110 0 0 03
Q ss_pred eEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCc
Q 008422 353 EHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDS 432 (566)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 432 (566)
+.+.+.+. .|.|||+.+. .
T Consensus 148 rE~~l~l~--------------------~~~iNG~~~~--~--------------------------------------- 166 (276)
T 3kw8_A 148 ATHTIVFN--------------------DMTINNRKPH--T--------------------------------------- 166 (276)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT--C---------------------------------------
T ss_pred cceEEEec--------------------ccccceeccc--C---------------------------------------
Confidence 33333221 2578886542 0
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCc
Q 008422 433 SLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGG 512 (566)
Q Consensus 433 ~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g 512 (566)
...+.++.|++|+|+|.|.+. +.||||||||.|+|++. |.++.. ...+.+|||+.|+|++
T Consensus 167 --------~p~i~v~~G~~vri~l~N~~~---~~Hp~HlHG~~f~v~~~--G~~~~p-------~~~~~~~Dtv~v~pg~ 226 (276)
T 3kw8_A 167 --------GPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRT--GILTGP-------DDPSRVIDNKITGPAD 226 (276)
T ss_dssp --------CCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSS--SSCCST-------TCCCCEESEEEECTTC
T ss_pred --------CCCEEEecCCEEEEEEecCCC---cceeEEEccceeEEecc--CccCCC-------cccccCCccEEeCCCc
Confidence 144678899999999999764 79999999999999754 323211 1234689999999999
Q ss_pred EEEEEEEec---CceeEEEEeecccccccccEEEEEEecCCCCCCCCCCC
Q 008422 513 WAVIRFRAN---NPGVWFMHCHLDVHLPWGLATAFVVENGPTPSTRLPPP 559 (566)
Q Consensus 513 ~~virf~ad---npG~w~~HCHil~H~~~GM~~~~~V~~~~~~~~~~~~~ 559 (566)
...++|+++ |||.|+||||+++|++.|||+.|+|.+.+ .++|..
T Consensus 227 ~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~---~~~p~~ 273 (276)
T 3kw8_A 227 SFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD---GTIPGY 273 (276)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT---SCCTTC
T ss_pred eEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCC---CCCCCC
Confidence 999999997 89999999999999999999999998754 345544
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=4.2e-26 Score=230.66 Aligned_cols=216 Identities=14% Similarity=0.191 Sum_probs=148.4
Q ss_pred CeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeC------------
Q 008422 207 QTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKAD------------ 274 (566)
Q Consensus 207 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~------------ 274 (566)
+.|+|+++.|++++++|.|... ...++|.||..+.. +.||... ..-.|.||+++...+++.
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~-~~~siH~HG~~~~~-~~dG~~~-----~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMD-VPVSLHVHGLDYEI-SSDGTKQ-----SRSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCSTT-----TTCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCCcCCc-cCCCCcc-----ccCCcCCCCEEEEEEEeccCCccccccccC
Confidence 5689999999999999999974 45668999976543 5688754 112478999998888764
Q ss_pred CCCceeEEEeeecccCCCC--CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCcc
Q 008422 275 QPVGSYYMAARAYASAPQI--PFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVD 352 (566)
Q Consensus 275 ~~~G~y~~~~~~~~~~~~~--~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~ 352 (566)
+..|.||++||........ ....+ .+.|....... ...|
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl--~G~liV~~~~~-------------------------------------~~~d 153 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGL--YGPVIVRRKGD-------------------------------------VLPD 153 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTC--EEEEEEECTTC-------------------------------------BCCS
T ss_pred CCceEEEEeecCcccccchhhhhccc--cCceEeecccc-------------------------------------cccc
Confidence 2458999999964321100 00112 22222222100 0013
Q ss_pred eEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCccCCCc
Q 008422 353 EHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTALSNDS 432 (566)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 432 (566)
+.+.+.+. .|++|+..+.
T Consensus 154 ~e~~l~~~--------------------d~t~Ng~~~~------------------------------------------ 171 (313)
T 3tas_A 154 RTHTIVFN--------------------DMTINNRPAH------------------------------------------ 171 (313)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT------------------------------------------
T ss_pred ccceeecc--------------------chhcccCCcc------------------------------------------
Confidence 34433221 2456654321
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCc
Q 008422 433 SLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGG 512 (566)
Q Consensus 433 ~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g 512 (566)
....+.++.|++|+|++.|.+. +.||||||||.|+|+..+.. ......|.++||+.|.|++
T Consensus 172 -------~~~~l~v~~Ge~vr~~liN~g~---~~hpfHlHGh~F~v~~~~~~---------~~~~~~~~~~Dtv~l~Pge 232 (313)
T 3tas_A 172 -------TGPDFEATVGDRVEFVMITHGE---YYHTFHLHGHRWADNRTGML---------TGPDDPSQVIDNKICGPAD 232 (313)
T ss_dssp -------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSTTSSC---------CSTTCCCCEESEEEECTTC
T ss_pred -------cccccccccCCEEEEEEecccc---cceeeeecCCeeEEEEECCc---------cCCCCCCeeeeEEEeCCCc
Confidence 1134567889999999999764 78999999999999876421 1122456799999999998
Q ss_pred EEEEEEE---ecCceeEEEEeecccccccccEEEEEEecC
Q 008422 513 WAVIRFR---ANNPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 513 ~~virf~---adnpG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
...+++. ++|||.|+|||||++|++.|||++|+|++.
T Consensus 233 r~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~ 272 (313)
T 3tas_A 233 SFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 272 (313)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred ceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECC
Confidence 8776665 569999999999999999999999999864
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=2.8e-24 Score=216.75 Aligned_cols=237 Identities=11% Similarity=0.051 Sum_probs=135.0
Q ss_pred EEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcC----cEEeeEEEECCCce
Q 008422 191 YTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTE----PYVTDVVVIAPGQT 266 (566)
Q Consensus 191 ~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~~~l~pgeR 266 (566)
.++||.. .|+|+++.|+++|+|++|.. ....++|.||..+.. +.||.+.. +...+...|.||||
T Consensus 52 ~~~n~~p----------GP~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLL----------GPTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSC----------CCCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCcc----------CCEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 3478774 47999999999999999987 456678888887432 57887652 22233578999999
Q ss_pred EEEEEeeCCCC---------ceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccc
Q 008422 267 TDVLLKADQPV---------GSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTG 337 (566)
Q Consensus 267 ~dv~v~~~~~~---------G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 337 (566)
++..+++++.+ |+||+++|...... ......+ ++|......... .+..... + .+ +.-
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q--~~~GL~G-~liV~~~~~~~~--~~~~~~~-d----~e----~~l 185 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED--FNSGLIG-PLLICKKGTLTE--DGTQKMF-E----KQ----HVL 185 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH--HHTTCCE-EEEEECTTCBCT--TSSBSSS-C----CC----CCC
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh--hccCceE-EEEEccCCCCCc--cCCcCcc-c----ce----EEE
Confidence 99999997543 69999999532111 0112223 444443221100 0000000 0 00 000
Q ss_pred CCCCCCCCCCCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCC
Q 008422 338 LKGGPQWVPVPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNP 417 (566)
Q Consensus 338 l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~ 417 (566)
+ . . + +.... ... ......+.|||+.+.
T Consensus 186 ~--------~-~--d------~d~~~-------~~~--~~~~~~~~ING~~~~--------------------------- 212 (306)
T 1sdd_A 186 M--------F-A--V------FDESK-------SWN--QTSSLMYTVNGYVNG--------------------------- 212 (306)
T ss_dssp B--------C-C--E------EETTS-------SSS--CCCCEEECSSSCCSS---------------------------
T ss_pred E--------E-E--e------ccccc-------ccc--cCCCcceeeCCEecC---------------------------
Confidence 0 0 0 0 00000 000 000123456665431
Q ss_pred CcccccCCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccC
Q 008422 418 PLIFDFTNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNL 497 (566)
Q Consensus 418 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~ 497 (566)
..+.+.++.|++++|+|.|.+. ....||||+|||.|++- |
T Consensus 213 ----------------------~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~d----G------------- 252 (306)
T 1sdd_A 213 ----------------------TMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQN----H------------- 252 (306)
T ss_dssp ----------------------CCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEET----T-------------
T ss_pred ----------------------CCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeeeC----C-------------
Confidence 0123456789999999999763 22579999999999861 1
Q ss_pred CCCCcceeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecC
Q 008422 498 VNPQRRNTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 498 ~~p~~rDTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
.++||+.|.||+.+.|+|++++||.|+||||+++|+++|||+.|+|.+.
T Consensus 253 ---~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 ---HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp ---EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred ---EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 2599999999999999999999999999999999999999999999753
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.87 E-value=8.4e-22 Score=218.75 Aligned_cols=238 Identities=13% Similarity=0.190 Sum_probs=143.5
Q ss_pred CeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcC---c-EEeeEEEECCCceEEEEEeeCCC-----C
Q 008422 207 QTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTE---P-YVTDVVVIAPGQTTDVLLKADQP-----V 277 (566)
Q Consensus 207 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~---p-~~~d~~~l~pgeR~dv~v~~~~~-----~ 277 (566)
+.|+|+++.|+++++||.|... ...++|.||.... .+.||.+.. | ..+....|.||++++..+++++. +
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 5689999999999999999985 4567899988764 478997642 2 22346689999999999999864 5
Q ss_pred c----eeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCcce
Q 008422 278 G----SYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPVPLQVDE 353 (566)
Q Consensus 278 G----~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~~~ 353 (566)
| +||+|+|...... ...++ ..++|......... .+..+. . ++
T Consensus 145 G~~c~T~wYHsH~~~~~q--~~~GL-~G~lIV~~~~~~~~--~~~~~~-~----------------------------~~ 190 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD--IHSGL-IGPLLICRKGTLDK--ETNMPV-D----------------------------MR 190 (647)
T ss_dssp SCSEEEEEEECCSSHHHH--HTTTC-EEEEEEECTTSSCT--TSCCCS-S----------------------------CC
T ss_pred CCCceEEEEccCCCCccc--ccccC-ccCEEEeeCCCccc--ccCCCC-c----------------------------ce
Confidence 7 9999999842111 01122 23444433221100 000000 0 11
Q ss_pred EEEEEec-ccccc---CCCCC-----c-cccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCccccc
Q 008422 354 HMFVTVG-LGLDR---CPANA-----T-CQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDF 423 (566)
Q Consensus 354 ~~~~~~~-~~~~~---~~~~~-----~-~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 423 (566)
.+.+.+. +.... ...+. . ..........+.+||+.+
T Consensus 191 e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~---------------------------------- 236 (647)
T 1sdd_B 191 EFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY---------------------------------- 236 (647)
T ss_dssp EEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSS----------------------------------
T ss_pred eEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec----------------------------------
Confidence 1111110 00000 00000 0 000000011233333322
Q ss_pred CCCccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcc
Q 008422 424 TNTALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRR 503 (566)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~r 503 (566)
..+.+.++.|++++|+|.|.+. ..+.||||+|||.|+|++. ++.++
T Consensus 237 ----------------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~~ 282 (647)
T 1sdd_B 237 ----------------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQL 282 (647)
T ss_dssp ----------------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEEE
T ss_pred ----------------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCccc
Confidence 1134577889999999999753 2258999999999999853 23479
Q ss_pred eeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008422 504 NTIAVPVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVEN 548 (566)
Q Consensus 504 DTv~vp~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~ 548 (566)
||+.|.|++.+.|+|++++||.|+||||+++|++.|||++|.|.+
T Consensus 283 d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 283 GVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp SSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred ceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 999999999999999999999999999999999999999999964
No 48
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.86 E-value=6.9e-21 Score=195.20 Aligned_cols=94 Identities=21% Similarity=0.253 Sum_probs=77.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCC--cceeEEeCCCcEEEEEEE
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQ--RRNTIAVPVGGWAVIRFR 519 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~ 519 (566)
..+.++.|++++|++.|.+. ..|++|+|||.|+|+.. |.+ .+++ ++||+.|++|+.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~~---~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQANR---DTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCCC---ccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 55788899999988877543 67899999999999852 222 2233 479999999999999999
Q ss_pred ecCceeEEEEeecc-cccccccEEEEEEecCCC
Q 008422 520 ANNPGVWFMHCHLD-VHLPWGLATAFVVENGPT 551 (566)
Q Consensus 520 adnpG~w~~HCHil-~H~~~GM~~~~~V~~~~~ 551 (566)
+++||.|+||||++ +|++.|||++|+|....+
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999986543
No 49
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.85 E-value=2.1e-20 Score=190.21 Aligned_cols=249 Identities=18% Similarity=0.165 Sum_probs=157.8
Q ss_pred ceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccC-ceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceE
Q 008422 189 DAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALN-NQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTT 267 (566)
Q Consensus 189 ~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~ 267 (566)
..+++||+. ..|.|++++|+++++|++|.... ..+.+|+||.. +.||... ...|.|||++
T Consensus 59 ~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~~ 119 (327)
T 1kbv_A 59 RYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRTS 119 (327)
T ss_dssp EEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEEE
T ss_pred EEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCEE
Confidence 479999983 46899999999999999999753 46778999863 5788643 1248999999
Q ss_pred EEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCC
Q 008422 268 DVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVPV 347 (566)
Q Consensus 268 dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~ 347 (566)
++.++++ .+|+||++||....... ...+. ..+++... .. .+| ..+. ++..-+....... .
T Consensus 120 ~y~f~~~-~~Gt~wyH~h~~~~~~~-~~~Gl-~G~~iV~~-~~----~~p---~~d~-----e~~l~~~d~~~~~----~ 179 (327)
T 1kbv_A 120 TFSFKAL-QPGLYIYHCAVAPVGMH-IANGM-YGLILVEP-KE----GLP---KVDK-----EFYIVQGDFYTKG----K 179 (327)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHHH-HHTTC-EEEEEEEC-TT----CCC---CCSE-----EEEEEEEEECBSS----C
T ss_pred EEEEECC-CCeEEEEEeCCCChhhh-hhcce-EEEEEEec-CC----CCC---CCce-----EEEEEeeeeeccC----c
Confidence 9999998 58999999986321000 00112 22344332 11 111 1110 0000000000000 0
Q ss_pred CCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCCc
Q 008422 348 PLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNTA 427 (566)
Q Consensus 348 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~ 427 (566)
. ...... ..... ...+ .....+.+||+.+.
T Consensus 180 ~-~~~g~~--~~~~~--------~~~~--~~~~~~~iNG~~~~------------------------------------- 209 (327)
T 1kbv_A 180 K-GAQGLQ--PFDMD--------KAVA--EQPEYVVFNGHVGA------------------------------------- 209 (327)
T ss_dssp T-TCCEEE--CBCHH--------HHHH--TCCSEEEETTSTTT-------------------------------------
T ss_pred c-cccccc--ccChh--------Hhcc--CCCceEEEcCcccC-------------------------------------
Confidence 0 000000 00000 0000 00113344443321
Q ss_pred cCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEE
Q 008422 428 LSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIA 507 (566)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~ 507 (566)
.+ +...+.++.|++++|+|.|.+. ...|+||+|||.|+|++...+. ..|.++|++.
T Consensus 210 ---------~~-~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~ 265 (327)
T 1kbv_A 210 ---------LT-GDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTI 265 (327)
T ss_dssp ---------TS-GGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEE
T ss_pred ---------CC-CceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEE
Confidence 00 1145788899999999999753 3689999999999999874321 2356899999
Q ss_pred eCCCcEEEEEEEecCceeEEEEeeccccc-ccccEEEEEEecCC
Q 008422 508 VPVGGWAVIRFRANNPGVWFMHCHLDVHL-PWGLATAFVVENGP 550 (566)
Q Consensus 508 vp~~g~~virf~adnpG~w~~HCHil~H~-~~GM~~~~~V~~~~ 550 (566)
|.+|+.+.|.|++++||.|++|||+.+|. ..||++++.|....
T Consensus 266 l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 266 VPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp ECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred ECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 99999999999999999999999999995 88999999997654
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.83 E-value=4.9e-19 Score=180.81 Aligned_cols=93 Identities=18% Similarity=0.190 Sum_probs=73.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCC--cceeEEeCCCcEEEEEEE
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQ--RRNTIAVPVGGWAVIRFR 519 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~ 519 (566)
..+.++.|++++|++.|.+. ..|++++|+|.|.|++. |.+ ..++ ++||+.|++|+.+.+.|.
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~~---~~~~h~i~~h~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 288 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPNR---DSRPHLIGGHGDLVWET--GKF-----------HNAPERDLETWFIRGGTAGAALYK 288 (333)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEecCCCEEEEEECCCCC---ccccEEECCCCeEEEeC--Ccc-----------cCCCccCcceEEECCCceEEEEEE
Confidence 45788899999988776542 33445577788888862 322 2222 589999999999999999
Q ss_pred ecCceeEEEEeeccccc-ccccEEEEEEecCC
Q 008422 520 ANNPGVWFMHCHLDVHL-PWGLATAFVVENGP 550 (566)
Q Consensus 520 adnpG~w~~HCHil~H~-~~GM~~~~~V~~~~ 550 (566)
+++||.|+||||++.|+ +.|||++|+|....
T Consensus 289 a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 289 FLQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CCSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred cCCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 99999999999999997 99999999998644
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.82 E-value=3e-21 Score=215.70 Aligned_cols=88 Identities=18% Similarity=0.315 Sum_probs=77.9
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++++|+|.|.+. ..+.||||||||.|+|++.+ +.++||+.|+|++++.|+|++|
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCS
T ss_pred CCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeC
Confidence 44678899999999999763 23589999999999998653 1289999999999999999999
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
+||.|+||||+++|++.|||..|.|.
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCCceEEEeccccccccccccccccc
Confidence 99999999999999999999999984
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.79 E-value=5.6e-18 Score=173.25 Aligned_cols=94 Identities=22% Similarity=0.248 Sum_probs=75.2
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCC--cceeEEeCCCcEEEEEEE
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQ--RRNTIAVPVGGWAVIRFR 519 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~--~rDTv~vp~~g~~virf~ 519 (566)
..+.++.|++++|+..+.+. ..+++++|||.|.|+. .|.+ ..|+ +.||+.|++|+.+.+.++
T Consensus 225 ~~l~v~~GervRlin~~~~~---~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~~~dtv~i~pGer~dvlv~ 288 (336)
T 1oe1_A 225 NALTAKVGETVLLIHSQANR---DTRPHLIGGHGDWVWE--TGKF-----------ANPPQRDLETWFIRGGSAGAALYT 288 (336)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEETTCCEEEEET--TCCT-----------TSCCEEEESBCCBCTTEEEEEEEE
T ss_pred cceEcCCCCEEEEEecCCCC---ccceEEECCcCceEeC--CCcC-----------cCCccccceEEEECCCCcEEEEEE
Confidence 56788999999986665432 4566667999999985 3322 2233 469999999999999999
Q ss_pred ecCceeEEEEeeccccc-ccccEEEEEEecCCC
Q 008422 520 ANNPGVWFMHCHLDVHL-PWGLATAFVVENGPT 551 (566)
Q Consensus 520 adnpG~w~~HCHil~H~-~~GM~~~~~V~~~~~ 551 (566)
+++||.|+||||.+.|. +.||+++|.|.+..+
T Consensus 289 ~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 289 FKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred cCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 99999999999999985 999999999986543
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.77 E-value=7.3e-18 Score=178.98 Aligned_cols=251 Identities=14% Similarity=0.164 Sum_probs=157.5
Q ss_pred CceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccC-ceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCce
Q 008422 188 SDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALN-NQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQT 266 (566)
Q Consensus 188 ~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR 266 (566)
...+++||+. +.|.|+++.|++++||+.|.... ..+.+|+||+. ..||... +..|.||++
T Consensus 48 ~~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~ 108 (442)
T 2zoo_A 48 YVFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHT 108 (442)
T ss_dssp EEEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCE
T ss_pred EEEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCE
Confidence 3479999993 46899999999999999999643 46779999975 3687532 235899999
Q ss_pred EEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCC
Q 008422 267 TDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGATTANPLMPVLPAFNDNPTAHRFYSNLTGLKGGPQWVP 346 (566)
Q Consensus 267 ~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~ 346 (566)
+++.++++ ++|+||++||....... ... +..+.+.+..... +| .++ .++..-+....
T Consensus 109 ~~y~f~~~-~~Gt~~yH~H~~~~~~~-~~~--Gl~G~~iv~~~~~----~~---~~d-----~e~~l~l~d~~------- 165 (442)
T 2zoo_A 109 STFNFKAL-NPGLYIYHCATAPVGMH-IAN--GMYGLILVEPKEG----LA---PVD-----REYYLVQGDFY------- 165 (442)
T ss_dssp EEEEEECC-SCEEEEEECCCSSHHHH-HHT--TCEEEEEEECTTC----CC---CCS-----EEEEEEEEEEC-------
T ss_pred EEEEEEcC-CCeEEEEecCCCChHHH-HhC--ccEEEEEEeCCCC----CC---CCC-----ceEEEEeeeee-------
Confidence 99999998 69999999974211000 001 1233344433211 11 110 00000000000
Q ss_pred CCCCcceEEEEEeccccccCCCCCccccCCCCeeeEeeccccccCCCCcchhhhhhcccCCcccCCCCCCCCcccccCCC
Q 008422 347 VPLQVDEHMFVTVGLGLDRCPANATCQGVNGQRNSASMNNHSFQPPTSLSLLQAFFFNVGGIFTPDFPDNPPLIFDFTNT 426 (566)
Q Consensus 347 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~ 426 (566)
........-...+... ... ....-.+.|||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~--------~~~--~~~~~~~liNG~~~~~----------------------------------- 200 (442)
T 2zoo_A 166 TKGEFGEAGLQPFDMA--------KAI--DEDADYVVFNGSVGST----------------------------------- 200 (442)
T ss_dssp BSSCTTCCEEECBCHH--------HHH--TTCCSEEEETTSTTTT-----------------------------------
T ss_pred ccCcccccccccCChh--------Hhc--cCCCCEEEECCCcCCC-----------------------------------
Confidence 0000000000000000 000 0001123444432200
Q ss_pred ccCCCccccCCCCcceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeE
Q 008422 427 ALSNDSSLLFAPKRTSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTI 506 (566)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv 506 (566)
.....+.++.|++++|+|.|.+. ...|+||+|||.|.|++...+ ...|.+.|++
T Consensus 201 ------------~~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~~ 254 (442)
T 2zoo_A 201 ------------TDENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQTT 254 (442)
T ss_dssp ------------SGGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS------------SCEECSBSEE
T ss_pred ------------CCCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCc------------cCCCccceEE
Confidence 00135678889999999999653 268999999999999987422 1225689999
Q ss_pred EeCCCcEEEEEEEecCceeEEEEeecccc-cccccEEEEEEecCCC
Q 008422 507 AVPVGGWAVIRFRANNPGVWFMHCHLDVH-LPWGLATAFVVENGPT 551 (566)
Q Consensus 507 ~vp~~g~~virf~adnpG~w~~HCHil~H-~~~GM~~~~~V~~~~~ 551 (566)
.|.||+...+.|++++||.|++|||...| .+.||+++|.|....+
T Consensus 255 ~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 255 LIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 99999999999999999999999999999 5999999999976543
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.77 E-value=1.9e-17 Score=175.44 Aligned_cols=238 Identities=14% Similarity=0.185 Sum_probs=162.9
Q ss_pred eEEEEEEEEEEEeccCc-----------eeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEE-eCccccCCC
Q 008422 25 IVEHTFHVKNLTIGRLC-----------RQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHW-HGIFQLLSA 91 (566)
Q Consensus 25 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~~~ 91 (566)
.+++.|.++.-....+| .....+++||+. .|+|+|++| ++++||.|... ....+|+ ||......+
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 46777777766554333 345789999986 599999999 99999999974 5678999 897765554
Q ss_pred CCCCCC-----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhcccc-e-----------eEEE-EeCCCCC---CC
Q 008422 92 WADGPS-----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRATV-H-----------GALI-IRPRSGH---KY 150 (566)
Q Consensus 92 ~~DG~~-----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~li-V~~~~~~---~~ 150 (566)
.||.+ .+++..|.|||++++.+++ ++.|+||++++......|+ . .+++ ....... ..
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 307 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD 307 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccc
Confidence 59964 3556889999999999998 6789999999865432221 0 1121 1111100 00
Q ss_pred CCCCC-----------CcceeEEeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEE
Q 008422 151 PFPKP-----------NKEVPIILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTY 219 (566)
Q Consensus 151 ~~~~~-----------~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~ 219 (566)
.++.. +.+..+.++ ..|+|||+.+. ...+.+.++.|+++
T Consensus 308 ~~p~~L~~~~~~~~~~~~~~~~~l~------------------------~~~~iNg~~f~------~~~~~~~~~~G~~~ 357 (451)
T 2uxt_A 308 SLPMRLLPTEIMAGSPIRSRDISLG------------------------DDPGINGQLWD------VNRIDVTAQQGTWE 357 (451)
T ss_dssp CCCSCSSSSCCCCCCCSEEEEEEEC------------------------SSSSBTTBCCC------TTCCCEEEETTCEE
T ss_pred cCccccCCCCCCCCCCcceEEEEEe------------------------eEEEECCEeCC------CCCCcEEcCCCCEE
Confidence 00000 000111110 04678999653 13456899999999
Q ss_pred EEEEEecccCceEEEEEcCCeEEEEEecCCCc---CcEEeeEEEECCCceEEEEEeeCCCCce----eEEEeeecccCCC
Q 008422 220 LLRIINAALNNQLFFKIANHNFTVVAIDACYT---EPYVTDVVVIAPGQTTDVLLKADQPVGS----YYMAARAYASAPQ 292 (566)
Q Consensus 220 rlRliN~~~~~~~~~~l~gh~~~via~DG~~~---~p~~~d~~~l~pgeR~dv~v~~~~~~G~----y~~~~~~~~~~~~ 292 (566)
+|+|+|. ..+.||||||.|+|++.||.+. +|..+||+.| |+++.|.++++ ++|. |+++||.+.....
T Consensus 358 ~~~l~N~---~~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil~H~d~ 431 (451)
T 2uxt_A 358 RWTVRAD---EPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTLEMADR 431 (451)
T ss_dssp EEEEEEE---EEEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSHHHHHT
T ss_pred EEEEECC---CCcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCchhHHhC
Confidence 9999998 3677999999999999999876 4788999999 99999999998 5666 9999999765431
Q ss_pred CCCCCcceEEEEEEcC
Q 008422 293 IPFDNTTTRGIVVYDG 308 (566)
Q Consensus 293 ~~~~~~~~~ail~y~~ 308 (566)
+..+.+.+..
T Consensus 432 ------GMm~~~~v~~ 441 (451)
T 2uxt_A 432 ------GSIGQLLVNP 441 (451)
T ss_dssp ------TCEEEEEEEC
T ss_pred ------CCcEEEEEcc
Confidence 2455666653
No 55
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.76 E-value=1.6e-17 Score=175.89 Aligned_cols=235 Identities=21% Similarity=0.265 Sum_probs=165.3
Q ss_pred eEEEEEEEEEEEecc------------CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCC
Q 008422 25 IVEHTFHVKNLTIGR------------LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSA 91 (566)
Q Consensus 25 ~~~~~l~~~~~~~~~------------~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~ 91 (566)
.+++.|.++.-.... .|.....+++||+. .|.|+|++| ++++||.|... ....+|++|......+
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~ 223 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA 223 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe
Confidence 467777776544322 13455789999987 599999999 99999999974 4678999998766555
Q ss_pred CCCCCC-----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhc--c--cc--------------eeEEEEe-CCCC
Q 008422 92 WADGPS-----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLR--A--TV--------------HGALIIR-PRSG 147 (566)
Q Consensus 92 ~~DG~~-----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~--~--Gl--------------~G~liV~-~~~~ 147 (566)
.||.+ .+....|.|||+++..+++ +++|.||++++..... . || ....+++ ....
T Consensus 224 -~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 224 -ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp -ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred -cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 59975 2345679999999999998 6699999999753211 0 22 1122222 1111
Q ss_pred CCCCCCCCC----------cceeEEeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCc
Q 008422 148 HKYPFPKPN----------KEVPIILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGK 217 (566)
Q Consensus 148 ~~~~~~~~~----------~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~ 217 (566)
...+++... ....+.+.- .. ....|+|||+.+. . ..+.+.++.|+
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~---~~----------------~g~~~~iNg~~~~---~---~~~~~~~~~g~ 356 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTE---DM----------------MAARFFINGQVFD---H---RRVDLKGQAQT 356 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEE---EG----------------GGTEEEETTBCCC---T---TCCCEEECTTC
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEe---ec----------------cCceEeECCEECC---C---CCCceecCCCC
Confidence 111111100 001111100 00 0126889999642 1 23458899999
Q ss_pred EEEEEEEecccCceEEEEEcCCeEEEEEecCCCc-CcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccC
Q 008422 218 TYLLRIINAALNNQLFFKIANHNFTVVAIDACYT-EPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 218 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~-~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
+++|+|.|.+.. .+.||||||.|+|++.+|... .|..+||+.|.||+++.|.++++ +||.|.+|||.....
T Consensus 357 ~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil~H~ 428 (439)
T 2xu9_A 357 VEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIVEHE 428 (439)
T ss_dssp EEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred EEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcchhh
Confidence 999999999854 455999999999999999876 68899999999999999999987 899999999987544
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.69 E-value=1.4e-15 Score=163.99 Aligned_cols=240 Identities=18% Similarity=0.198 Sum_probs=156.1
Q ss_pred EEEEEECCCCC---------CCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCe
Q 008422 44 QTITAVNGSLP---------GPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNS 109 (566)
Q Consensus 44 ~~~~~~NG~~p---------GP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~ 109 (566)
...+++||+.. -|+|+|++|+++|+||.|... ....+|++|......+ .||.+ .+....|.|||+
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 45789999853 189999999999999999975 4678999988766554 59965 234567999999
Q ss_pred eEEEEEeCCCCcceeEeecchhh----cccceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCH------H-----HH
Q 008422 110 YTYKFRIVNQEGTLWWHAHFSML----RATVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADI------I-----DV 174 (566)
Q Consensus 110 ~~Y~f~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~------~-----~~ 174 (566)
++..++++..+|.||.+++.... ..|+..+++.........+..... . ...+.+...... . ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999986521 114434555443221111100000 0 000000000000 0 00
Q ss_pred HHH-HHhcCCCCCCCceEEEcCCCCCCCCC-------------C--CCCeeEEEEECCcEEEEEEEecccCceEEEEEcC
Q 008422 175 AKQ-AQATGGGPNISDAYTINGRPGDLYPC-------------S--QNQTYTLKVETGKTYLLRIINAALNNQLFFKIAN 238 (566)
Q Consensus 175 ~~~-~~~~g~~~~~~~~~liNG~~g~~~~~-------------~--~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~g 238 (566)
... ....+. ......|.|||+.+..... . ......+.++.|++++++++| ...|.|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 000 000000 0011257899996531100 0 012357899999999999999 3356699999
Q ss_pred CeEEEEEecCCC----cCcEEeeEEEE-CCCceEEEEEeeCCCCceeEEEeeecccCC
Q 008422 239 HNFTVVAIDACY----TEPYVTDVVVI-APGQTTDVLLKADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 239 h~~~via~DG~~----~~p~~~d~~~l-~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~ 291 (566)
|.|+|++.+|.. ..|..+||+.| .||+++.|.++++ +||.|.+|||......
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H~~ 480 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWHLE 480 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHHHT
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHHHh
Confidence 999999999875 26889999999 7999999999998 8999999999876544
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.69 E-value=2.6e-15 Score=161.40 Aligned_cols=261 Identities=16% Similarity=0.166 Sum_probs=164.5
Q ss_pred EEEEEEEEEEeccCce-----eEEEEEECCCCC--------CCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCC
Q 008422 27 EHTFHVKNLTIGRLCR-----QQTITAVNGSLP--------GPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAW 92 (566)
Q Consensus 27 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~p--------GP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~ 92 (566)
++-|.++.-....++. ....+++||+.. .|+|+|++|+++++||.|... ....+|++|......+
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4556665544333332 246789999863 289999999999999999974 4678999888766554
Q ss_pred CCCCC----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchh--h-----c-ccceeEEEEeCCCCCCCCCCCCCccee
Q 008422 93 ADGPS----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM--L-----R-ATVHGALIIRPRSGHKYPFPKPNKEVP 160 (566)
Q Consensus 93 ~DG~~----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~--~-----~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 160 (566)
.||.+ .+....|.|||+++..+++...+|.||.+++... . . .++..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 59964 2344568999999999998555799999998541 1 1 14433444443221110100000000
Q ss_pred EEeceecccCH--HHH----H----HHHHhcCCCCCCCceEEEcCCCCCCCCC-------C--------CCCeeEEEEEC
Q 008422 161 IILGEWWNADI--IDV----A----KQAQATGGGPNISDAYTINGRPGDLYPC-------S--------QNQTYTLKVET 215 (566)
Q Consensus 161 l~~~d~~~~~~--~~~----~----~~~~~~g~~~~~~~~~liNG~~g~~~~~-------~--------~~~~~~~~v~~ 215 (566)
..+.+...... ... . .....-... .....|+|||+.+..... + ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 000 0 000000000 011268899996531100 0 01235789999
Q ss_pred CcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCc----CcEEeeEEEE-CCCceEEEEEeeCCCCceeEEEeeecccC
Q 008422 216 GKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYT----EPYVTDVVVI-APGQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 216 G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~----~p~~~d~~~l-~pgeR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
|++++++++|......|.||||||.|+|++.+|... .|..+||+.| .||+++.|.++++ +||.|.+|||.....
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil~H~ 458 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIEFHL 458 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCchhHh
Confidence 999999999544345667999999999999999752 6889999999 8999999999998 899999999986554
Q ss_pred C
Q 008422 291 P 291 (566)
Q Consensus 291 ~ 291 (566)
.
T Consensus 459 ~ 459 (503)
T 1hfu_A 459 M 459 (503)
T ss_dssp H
T ss_pred h
Confidence 3
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.66 E-value=2.5e-15 Score=159.53 Aligned_cols=242 Identities=15% Similarity=0.204 Sum_probs=162.8
Q ss_pred EEEEEEEEEEEeccCc-------------eeEEEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCceeEEEeCccccCCC
Q 008422 26 VEHTFHVKNLTIGRLC-------------RQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKS-PYNLTIHWHGIFQLLSA 91 (566)
Q Consensus 26 ~~~~l~~~~~~~~~~g-------------~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l-~~~~~iH~HG~~~~~~~ 91 (566)
.+| |.++......+| .....+++||+.. |+|+|++|+ |+||.|.. .....+|++|......+
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~~-p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFK-PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEES-CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCccC-ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 455 777666554444 2446899999874 999999999 99999997 56678999998866555
Q ss_pred CCCCCC-----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc-------ceeEEEEeCC-CCCCCC-------
Q 008422 92 WADGPS-----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT-------VHGALIIRPR-SGHKYP------- 151 (566)
Q Consensus 92 ~~DG~~-----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G-------l~G~liV~~~-~~~~~~------- 151 (566)
.||.. .+....|.|||+++..+++ .+.|+|...++......+ -.-.+-+... .....|
T Consensus 257 -~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~ 334 (481)
T 3zx1_A 257 -TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFK 334 (481)
T ss_dssp -ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCC
T ss_pred -cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCC
Confidence 59732 3445679999999999998 677888777654322100 0011112111 111111
Q ss_pred -CCCCCcceeEEeceecccC-------HHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEE
Q 008422 152 -FPKPNKEVPIILGEWWNAD-------IIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRI 223 (566)
Q Consensus 152 -~~~~~~e~~l~~~d~~~~~-------~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRl 223 (566)
++..+....+.++.....- .... ...+ ...++|||+.+. ...+.++++.|++++|+|
T Consensus 335 ~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l 399 (481)
T 3zx1_A 335 PSEEPKEFKEIIMSEDHMQMHGMMGKSEGEL-KIAL--------ASMFLINRKSYD------LKRIDLSSKLGVVEDWIV 399 (481)
T ss_dssp CCCCCCEEEEEEEEECCSTTTTGGGCCHHHH-HHHH--------HTTEEETTBCCC------TTCCCEEEETTCCEEEEE
T ss_pred CCCCCCcEEEEEEeccchhcccccccccccc-cccc--------cceeEECCEeCC------CCCceEEeCCCCEEEEEE
Confidence 1112233333332211000 0000 0000 125899999542 245679999999999999
Q ss_pred EecccCceEEEEEcCCeEEEEEe--cCCCc---CcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccC
Q 008422 224 INAALNNQLFFKIANHNFTVVAI--DACYT---EPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 224 iN~~~~~~~~~~l~gh~~~via~--DG~~~---~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
+|.+. ..+.||||||.|+|++. ||... ++.++|++.|.||+++.|.++++ ++|.|+++||.....
T Consensus 400 ~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil~H~ 469 (481)
T 3zx1_A 400 INKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHILEHE 469 (481)
T ss_dssp EECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSHHHH
T ss_pred EcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCChHHH
Confidence 99774 45669999999999999 89765 46789999999999999999997 899999999987543
No 59
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.5e-14 Score=153.40 Aligned_cols=228 Identities=14% Similarity=0.138 Sum_probs=152.6
Q ss_pred EEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCeeEEEEEeCC
Q 008422 44 QTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNSYTYKFRIVN 118 (566)
Q Consensus 44 ~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~~~Y~f~~~~ 118 (566)
...+++||+. .|+|+|++|+++++||.|... ....+|++|......+ .||.+ .+....|.|||+++..+++..
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 4688999987 499999999999999999974 4678888887766554 59965 234567999999999999843
Q ss_pred C-CcceeEeecchhhc-------cccee-EEEEeCCCC-CCCC-----CC------------------CCCcceeEEece
Q 008422 119 Q-EGTLWWHAHFSMLR-------ATVHG-ALIIRPRSG-HKYP-----FP------------------KPNKEVPIILGE 165 (566)
Q Consensus 119 ~-~Gt~wYH~H~~~~~-------~Gl~G-~liV~~~~~-~~~~-----~~------------------~~~~e~~l~~~d 165 (566)
+ .|.||......... ....+ +++...... .+.+ +. ..++.+.+.++-
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~~~ 324 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDVVM 324 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEEEE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEEEe
Confidence 3 57999998754321 01122 233222211 0000 00 001111111100
Q ss_pred ecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCC--------------C----CCCeeEEEEECCcEEEEEEEecc
Q 008422 166 WWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPC--------------S----QNQTYTLKVETGKTYLLRIINAA 227 (566)
Q Consensus 166 ~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~--------------~----~~~~~~~~v~~G~~~rlRliN~~ 227 (566)
.. .......++|||+.+..... + ......+.++.|++++|.|.|.+
T Consensus 325 --------------~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~ 388 (534)
T 1zpu_A 325 --------------DN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD 388 (534)
T ss_dssp --------------EE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS
T ss_pred --------------ec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC
Confidence 00 00112367899986421100 0 00134688999999999999988
Q ss_pred cCceEEEEEcCCeEEEEEecCC-----------C---------cCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeec
Q 008422 228 LNNQLFFKIANHNFTVVAIDAC-----------Y---------TEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAY 287 (566)
Q Consensus 228 ~~~~~~~~l~gh~~~via~DG~-----------~---------~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~ 287 (566)
.. .|.||||||.|+|++.++. + ..|..+||+.|.||+.+.|.++++ +||.|.+|||..
T Consensus 389 ~~-~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~ 466 (534)
T 1zpu_A 389 TG-THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIE 466 (534)
T ss_dssp SS-CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCH
T ss_pred CC-CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCch
Confidence 54 5669999999999998853 1 247899999999999999999998 899999999986
Q ss_pred ccCC
Q 008422 288 ASAP 291 (566)
Q Consensus 288 ~~~~ 291 (566)
....
T Consensus 467 ~H~~ 470 (534)
T 1zpu_A 467 WHLL 470 (534)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 5443
No 60
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.62 E-value=1.3e-14 Score=153.98 Aligned_cols=254 Identities=14% Similarity=0.133 Sum_probs=161.0
Q ss_pred EEEEEEEEEEEeccCc--------------eeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEE-eCccccC
Q 008422 26 VEHTFHVKNLTIGRLC--------------RQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHW-HGIFQLL 89 (566)
Q Consensus 26 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~-HG~~~~~ 89 (566)
.++.|.++.-....+| .....+++||+.. |.+.+ +|+++|+||.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3666777766543333 3446899999864 88876 67899999999964 5677888 6766544
Q ss_pred CCCCCCCC-----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc------c-ceeEEEEeC-----CCCCCC--
Q 008422 90 SAWADGPS-----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA------T-VHGALIIRP-----RSGHKY-- 150 (566)
Q Consensus 90 ~~~~DG~~-----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~------G-l~G~liV~~-----~~~~~~-- 150 (566)
.+ .||.+ .++...|.|||+++..+++ .+.++|+.-+....... . -.-.+-|.+ ....+.
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 44 49953 3445779999999999998 67778877665322111 1 001222221 111110
Q ss_pred -CC---CC----CCcceeEEece-ecccCHHHHHHHHH----h------------cCCCC--------CCCceEEEcCCC
Q 008422 151 -PF---PK----PNKEVPIILGE-WWNADIIDVAKQAQ----A------------TGGGP--------NISDAYTINGRP 197 (566)
Q Consensus 151 -~~---~~----~~~e~~l~~~d-~~~~~~~~~~~~~~----~------------~g~~~--------~~~~~~liNG~~ 197 (566)
++ +. ..+++.+.+.. +.......+..++. . .|... .....|+|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 11 11 11333333311 00000000100000 0 01000 001247999996
Q ss_pred CCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcC---cEEeeEEEECCCceEEEEEeeC
Q 008422 198 GDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTE---PYVTDVVVIAPGQTTDVLLKAD 274 (566)
Q Consensus 198 g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~---p~~~d~~~l~pgeR~dv~v~~~ 274 (566)
++ ...+.++++.|+++||+|+|.+....+.||||||.|+|++.||.... +.++|++.|. |++++|.++++
T Consensus 387 ~~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~ 459 (488)
T 3od3_A 387 FD------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFN 459 (488)
T ss_dssp CC------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBC
T ss_pred CC------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEec
Confidence 53 24567899999999999999996666779999999999999998774 3578999999 99999999997
Q ss_pred C---CCceeEEEeeecccC
Q 008422 275 Q---PVGSYYMAARAYASA 290 (566)
Q Consensus 275 ~---~~G~y~~~~~~~~~~ 290 (566)
+ ++|.|++|||.+...
T Consensus 460 ~~~~~~G~~m~HCH~l~He 478 (488)
T 3od3_A 460 HDAPKEHAYMAHCHLLEHE 478 (488)
T ss_dssp SCCCGGGCEEEEESSHHHH
T ss_pred cCCCCCCCEEEeCCchHHH
Confidence 4 468999999987543
No 61
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.61 E-value=6e-14 Score=149.84 Aligned_cols=245 Identities=17% Similarity=0.192 Sum_probs=154.5
Q ss_pred eEEEEEECCCC---------CCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCCcCCCCC
Q 008422 43 QQTITAVNGSL---------PGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQCPITPGN 108 (566)
Q Consensus 43 ~~~~~~~NG~~---------pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~ 108 (566)
....+++||+- +-|.|+|++|+++++||.|... ....+|++|......+ .||.+ .+....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 35688999963 3479999999999999999864 5678899888766554 59965 23446799999
Q ss_pred eeEEEEEeCCCCcceeEeecchhh----cccceeEEEEeCCCCCCCCCCCCCc-ceeEEeceecccCHHHH-HHHHHhcC
Q 008422 109 SYTYKFRIVNQEGTLWWHAHFSML----RATVHGALIIRPRSGHKYPFPKPNK-EVPIILGEWWNADIIDV-AKQAQATG 182 (566)
Q Consensus 109 ~~~Y~f~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~g 182 (566)
+++..+++....|.||..+..... ..|..-+++.........|...... ... .+.+......... .......+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 999999985556999999865321 1133334554433211111000000 000 0000000000000 00000000
Q ss_pred CC--------CCCCceEEEcCCCCCCCCC-------C--------CCCeeEEEEECCcEEEEEEEecccCceEEEEEcCC
Q 008422 183 GG--------PNISDAYTINGRPGDLYPC-------S--------QNQTYTLKVETGKTYLLRIINAALNNQLFFKIANH 239 (566)
Q Consensus 183 ~~--------~~~~~~~liNG~~g~~~~~-------~--------~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh 239 (566)
.. ......|+|||+.+..... + ......+.++.|++|+|.|.|......|.||||||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh 404 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGH 404 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTC
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCC
Confidence 00 0011268899986421100 0 01234689999999999998433344567999999
Q ss_pred eEEEEEecCCCc----CcEEeeEEEECC-CceEEEEEeeCCCCceeEEEeeecccC
Q 008422 240 NFTVVAIDACYT----EPYVTDVVVIAP-GQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 240 ~~~via~DG~~~----~p~~~d~~~l~p-geR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
.|+|++.+|... .|...|++.|.+ |+.+.|.++++ +||.|.+|||.....
T Consensus 405 ~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~~H~ 459 (495)
T 3t6v_A 405 DFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHIDWHL 459 (495)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCHHHH
T ss_pred cEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecchhHh
Confidence 999999988654 688999999997 99999999998 899999999986543
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.59 E-value=3.6e-14 Score=154.35 Aligned_cols=226 Identities=19% Similarity=0.190 Sum_probs=142.9
Q ss_pred eEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCeeEEEEEeC-CCCcceeEeecch
Q 008422 57 TIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNSYTYKFRIV-NQEGTLWWHAHFS 130 (566)
Q Consensus 57 ~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~~~Y~f~~~-~~~Gt~wYH~H~~ 130 (566)
+|+|++|+++++||.|... ....+|++|......+ .||.+ .+....|.|||+++..+++. ..+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999974 4678999998766554 59964 33456799999999999983 4589999999875
Q ss_pred hhc-c--cceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHHHHHHHh------cCCCC----------------
Q 008422 131 MLR-A--TVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDVAKQAQA------TGGGP---------------- 185 (566)
Q Consensus 131 ~~~-~--Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~------~g~~~---------------- 185 (566)
... . ...+.|-.........+... ....+ .| +........... ....+
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~--~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 356 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AW--DDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVI 356 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CT--TCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEE
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----cc--ccccccccccccccccCCCCCCCCCCcEEEEEEEeeccC
Confidence 321 1 11233333222210000000 00000 00 000000000000 00000
Q ss_pred CCCceEEEcCCCCCCC----------------C----------CCC-----------CCeeEEEEECCcEEEEEEEeccc
Q 008422 186 NISDAYTINGRPGDLY----------------P----------CSQ-----------NQTYTLKVETGKTYLLRIINAAL 228 (566)
Q Consensus 186 ~~~~~~liNG~~g~~~----------------~----------~~~-----------~~~~~~~v~~G~~~rlRliN~~~ 228 (566)
.....|.|||+.+..- + |.. .....+.++.|++++|.|.|.+.
T Consensus 357 ~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~ 436 (552)
T 1aoz_A 357 NGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANM 436 (552)
T ss_dssp TTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCC
T ss_pred CCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcc
Confidence 0012467888743110 0 000 01235789999999999999875
Q ss_pred C-----ceEEEEEcCCeEEEEEe-cCCC----------cCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCC
Q 008422 229 N-----NQLFFKIANHNFTVVAI-DACY----------TEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 229 ~-----~~~~~~l~gh~~~via~-DG~~----------~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~ 291 (566)
. ..|.||||||.|+|++. +|.+ ..|..+||+.|.+|+.+.|.++++ +||.|.+|||......
T Consensus 437 ~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~~H~~ 514 (552)
T 1aoz_A 437 MKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIEPHLH 514 (552)
T ss_dssp SSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSHHHHH
T ss_pred cccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeehhHhh
Confidence 3 35779999999999998 4653 267899999999999999999998 8999999999976543
No 63
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.59 E-value=8.4e-14 Score=148.71 Aligned_cols=245 Identities=16% Similarity=0.179 Sum_probs=153.2
Q ss_pred eEEEEEECCCC--------CCCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCe
Q 008422 43 QQTITAVNGSL--------PGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNS 109 (566)
Q Consensus 43 ~~~~~~~NG~~--------pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~ 109 (566)
....+++||+. +-|.|+|++|+++++||.|... ....+|++|......+ .||.+ .+....|.|||+
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35688999973 3479999999999999999964 5678999998766555 59965 233467999999
Q ss_pred eEEEEEeCCCCcceeEeecchhhc----ccceeEEEEeCCCCCCCCCCCCCcceeEEeceecccCHHHH-HHHHHhcCCC
Q 008422 110 YTYKFRIVNQEGTLWWHAHFSMLR----ATVHGALIIRPRSGHKYPFPKPNKEVPIILGEWWNADIIDV-AKQAQATGGG 184 (566)
Q Consensus 110 ~~Y~f~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~~~g~~ 184 (566)
++..++++...|.||..+...... .+..-+++.........|......... .+.+......... .......+..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 999999855569999988643211 122223444432211111000000000 0000000000000 0000000000
Q ss_pred --------CCCCceEEEcCCCCCCCCC-------C--------CCCeeEEEEECCcEEEEEEEecc--cCceEEEEEcCC
Q 008422 185 --------PNISDAYTINGRPGDLYPC-------S--------QNQTYTLKVETGKTYLLRIINAA--LNNQLFFKIANH 239 (566)
Q Consensus 185 --------~~~~~~~liNG~~g~~~~~-------~--------~~~~~~~~v~~G~~~rlRliN~~--~~~~~~~~l~gh 239 (566)
......|+|||+.+..... + ......+.++.|++|+|.|.|.+ ....|.||||||
T Consensus 323 d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh 402 (499)
T 3pxl_A 323 DKAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGH 402 (499)
T ss_dssp SEEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTC
T ss_pred cEEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCC
Confidence 0012268899986421100 0 01235789999999999999432 234567999999
Q ss_pred eEEEEEecCCCc----CcEEeeEEEECC---CceEEEEEeeCCCCceeEEEeeecccC
Q 008422 240 NFTVVAIDACYT----EPYVTDVVVIAP---GQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 240 ~~~via~DG~~~----~p~~~d~~~l~p---geR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
.|+|++.+|... .|...|++.|.+ |+.+.|.++++ +||.|.+|||.....
T Consensus 403 ~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~~H~ 459 (499)
T 3pxl_A 403 TFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHIDFHL 459 (499)
T ss_dssp CEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred cEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCChhHh
Confidence 999999888543 688999999987 99999999998 899999999986543
No 64
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.57 E-value=2.6e-13 Score=147.46 Aligned_cols=246 Identities=11% Similarity=0.112 Sum_probs=150.7
Q ss_pred EEEEEECCCCC--------CCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCee
Q 008422 44 QTITAVNGSLP--------GPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNSY 110 (566)
Q Consensus 44 ~~~~~~NG~~p--------GP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~~ 110 (566)
...+++||+.. -|.|++++|+++++||.|... ....+|++|......+ .||.+ .+....|.|||++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 45789999873 379999999999999999974 4678999988766554 59976 2445679999999
Q ss_pred EEEEEeCCCCcceeEeecc--hhh---cc-cceeEEEEeCCCCCCCCCCC----CC----cceeE-EeceecccCHH---
Q 008422 111 TYKFRIVNQEGTLWWHAHF--SML---RA-TVHGALIIRPRSGHKYPFPK----PN----KEVPI-ILGEWWNADII--- 172 (566)
Q Consensus 111 ~Y~f~~~~~~Gt~wYH~H~--~~~---~~-Gl~G~liV~~~~~~~~~~~~----~~----~e~~l-~~~d~~~~~~~--- 172 (566)
+..++++...|.||..... ... .. ....+++.........|... .+ .+..+ -+.........
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999985557999998876 211 11 11122333222111111000 00 00000 00000000000
Q ss_pred HHHHHH-HhcCCCCCCCceEEEcCCCCCCCCCCC-------------CCeeEEEEECCcEEEEEEEeccc----CceEEE
Q 008422 173 DVAKQA-QATGGGPNISDAYTINGRPGDLYPCSQ-------------NQTYTLKVETGKTYLLRIINAAL----NNQLFF 234 (566)
Q Consensus 173 ~~~~~~-~~~g~~~~~~~~~liNG~~g~~~~~~~-------------~~~~~~~v~~G~~~rlRliN~~~----~~~~~~ 234 (566)
...... ............+.|||+......... .....+.++.++.+++.++|... ...|.|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 000000012236899999642110000 01234777777777766676643 456779
Q ss_pred EEcCCeEEEEEecC---------CC------------cCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCC
Q 008422 235 KIANHNFTVVAIDA---------CY------------TEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 235 ~l~gh~~~via~DG---------~~------------~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~ 291 (566)
|||||.|+|++.++ .. ..|..+||+.|.+++++.|.++++ +||.|++|||......
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil~H~~ 510 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIAWHVS 510 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCHHHHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecchhHhh
Confidence 99999999999986 22 147789999999999999999988 8999999999976543
No 65
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.57 E-value=1.4e-13 Score=149.88 Aligned_cols=237 Identities=17% Similarity=0.167 Sum_probs=149.1
Q ss_pred eEEEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCceeEEEeCc-------cccCCCCCCCCC-----CCC------CCc
Q 008422 43 QQTITAVNGSLPGPTIRVHEGDTLIVHVFNKS-PYNLTIHWHGI-------FQLLSAWADGPS-----MIT------QCP 103 (566)
Q Consensus 43 ~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l-~~~~~iH~HG~-------~~~~~~~~DG~~-----~vt------q~~ 103 (566)
....+++||+. .|.+.|++| ++|+||.|.. .....+++.|. .....+ .||.+ .+. ...
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa-~DG~~l~~P~~~~~~~~~~~l~ 329 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPVLS 329 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSSEE
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE-eCCeEccCCEEecccCcccEEE
Confidence 34678999986 499999999 9999999997 46678888765 222222 48854 233 567
Q ss_pred CCCCCeeEEEEEeCCCCc-ceeEeecchhhcccc--------ee---EEEEeCCC-CCCCCCCCCC-------------c
Q 008422 104 ITPGNSYTYKFRIVNQEG-TLWWHAHFSMLRATV--------HG---ALIIRPRS-GHKYPFPKPN-------------K 157 (566)
Q Consensus 104 i~PG~~~~Y~f~~~~~~G-t~wYH~H~~~~~~Gl--------~G---~liV~~~~-~~~~~~~~~~-------------~ 157 (566)
|.|||+++..+++...+| +++...-......|. .+ -+.|..+. .....++... .
T Consensus 330 l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~~ 409 (612)
T 2g23_A 330 AAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPHG 409 (612)
T ss_dssp ECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCCE
T ss_pred ECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccccc
Confidence 999999999999854467 466665432111111 11 14444332 1111111110 0
Q ss_pred ceeEEec------------eecccCHHHHHHHHHhc--C-----CCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcE
Q 008422 158 EVPIILG------------EWWNADIIDVAKQAQAT--G-----GGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKT 218 (566)
Q Consensus 158 e~~l~~~------------d~~~~~~~~~~~~~~~~--g-----~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~ 218 (566)
...+++. -|....... ....... + ........++|||+.+. ..+.++++.|++
T Consensus 410 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G~~ 481 (612)
T 2g23_A 410 HRLIVLTPPGTKGSGGHPEIWEMAEVED-PADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEGTH 481 (612)
T ss_dssp EEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTCE
T ss_pred eeEEeeccccccccccccceeecccccc-ccccccccccceeeeccCCceeEEEECCccCC-------CCCceEecCCCE
Confidence 1122221 011110000 0000000 0 00011235889999652 557899999999
Q ss_pred EEEEEEecccCceEEEEEcCCeEEEEEecCC------------------------Cc---CcEEeeEEEECCCceEEEEE
Q 008422 219 YLLRIINAALNNQLFFKIANHNFTVVAIDAC------------------------YT---EPYVTDVVVIAPGQTTDVLL 271 (566)
Q Consensus 219 ~rlRliN~~~~~~~~~~l~gh~~~via~DG~------------------------~~---~p~~~d~~~l~pgeR~dv~v 271 (566)
++|+|+|.+.. .|.||||||.|+|++.+|. .+ ++.++|++.|.||+++.|.+
T Consensus 482 v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~ 560 (612)
T 2g23_A 482 EQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMG 560 (612)
T ss_dssp EEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEE
T ss_pred EEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEE
Confidence 99999999844 5669999999999987531 11 23478999999999999999
Q ss_pred eeCCCCceeEEEeeecccCC
Q 008422 272 KADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 272 ~~~~~~G~y~~~~~~~~~~~ 291 (566)
+++..+|.|++|||.+....
T Consensus 561 ~~~~~pG~w~~HCHil~Hed 580 (612)
T 2g23_A 561 KFDGAYGRFMYHCHLLEHED 580 (612)
T ss_dssp ECCSCCEEEEEEESSHHHHT
T ss_pred EeCCCCccEEEEeCchhHhh
Confidence 99877999999999976544
No 66
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.56 E-value=6.1e-14 Score=148.37 Aligned_cols=231 Identities=13% Similarity=0.118 Sum_probs=153.6
Q ss_pred EEEEEEEEEEEecc-------------CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEE--eC---cc
Q 008422 26 VEHTFHVKNLTIGR-------------LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHW--HG---IF 86 (566)
Q Consensus 26 ~~~~l~~~~~~~~~-------------~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~--HG---~~ 86 (566)
+++.|.++.-.... .|.....+++||+.. |+|+|++| ++++||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~-p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVKD-AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEET-CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCccc-ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56666666554332 133456889999874 99999999 99999999974 5678999 77 44
Q ss_pred ccCCCCCCCCC-----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhcc----cc----------eeE--EEEeCC
Q 008422 87 QLLSAWADGPS-----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRA----TV----------HGA--LIIRPR 145 (566)
Q Consensus 87 ~~~~~~~DG~~-----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~----Gl----------~G~--liV~~~ 145 (566)
....+ .||.+ .+....|.|||+++..+++ . .|.||..++...... ++ ... +.+..+
T Consensus 216 ~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLIA-VDQGFLARPIEVRALFLAPAERAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEEE-eCCCccCCceEeceEEECCcceEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 44333 49964 2345679999999999998 4 578898887532110 01 111 222111
Q ss_pred CCC--CCCCCC-------CCcceeEEeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEE-EEC
Q 008422 146 SGH--KYPFPK-------PNKEVPIILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLK-VET 215 (566)
Q Consensus 146 ~~~--~~~~~~-------~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~-v~~ 215 (566)
... +..+.. ...+..+.+.. + ...|+|||+.+. ...+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~------~~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWN------ASNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCC------TTCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCC------CCCCceeccCC
Confidence 110 000100 01111122210 0 115899999653 1234566 899
Q ss_pred CcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCc---------------CcEEeeEEEECCCceEEEEEeeC----CC
Q 008422 216 GKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYT---------------EPYVTDVVVIAPGQTTDVLLKAD----QP 276 (566)
Q Consensus 216 G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~---------------~p~~~d~~~l~pgeR~dv~v~~~----~~ 276 (566)
|++++|+|.|.+....+.||||||.|+|++.+|... +|..+||+.|.||+++.|.+++. ++
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adn 425 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQ 425 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTC
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCC
Confidence 999999999998444566999999999999999764 23589999999999999996664 25
Q ss_pred CceeEEEeeecccC
Q 008422 277 VGSYYMAARAYASA 290 (566)
Q Consensus 277 ~G~y~~~~~~~~~~ 290 (566)
| |.+|||.....
T Consensus 426 p--w~~HCHil~H~ 437 (448)
T 3aw5_A 426 L--FPFHCHNLEHE 437 (448)
T ss_dssp E--EEEEESSHHHH
T ss_pred c--EEEEcCChHHH
Confidence 5 99999987554
No 67
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.53 E-value=4e-15 Score=125.08 Aligned_cols=89 Identities=22% Similarity=0.211 Sum_probs=69.7
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCC--CCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc
Q 008422 52 SLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLS--AWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF 129 (566)
Q Consensus 52 ~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~--~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (566)
++++|+|++++||+|+ |+|.++.++++||||...+.. ..+||.+ .+++.|.||++++|.|++++++|+||||||.
T Consensus 15 ~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 15 QFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp CEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred EEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 5678999999999975 579988999999999876531 0123322 2456899999999999875689999999995
Q ss_pred hhhcccceeEEEEeC
Q 008422 130 SMLRATVHGALIIRP 144 (566)
Q Consensus 130 ~~~~~Gl~G~liV~~ 144 (566)
|. ..||.|.|+|++
T Consensus 92 H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 92 HR-GAGMVGKITVEG 105 (105)
T ss_dssp TG-GGTCEEEEEECC
T ss_pred ch-hcCCEEEEEEcC
Confidence 43 349999999964
No 68
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.50 E-value=2.7e-13 Score=145.98 Aligned_cols=232 Identities=14% Similarity=0.090 Sum_probs=148.0
Q ss_pred eEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeCc-cccCCCCCCCCC-----CCCCCcCCCCCeeEEEEE
Q 008422 43 QQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGI-FQLLSAWADGPS-----MITQCPITPGNSYTYKFR 115 (566)
Q Consensus 43 ~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~-~~~~~~~~DG~~-----~vtq~~i~PG~~~~Y~f~ 115 (566)
....+++||+. .|.|.++.| ++|+||.|... ....+|+.|. .....+ .||.+ .+....|.|||+++..++
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 305 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIIID 305 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEEE
Confidence 34688999987 499999885 99999999975 4578999877 544443 59943 244567999999999999
Q ss_pred eCCCCcceeE-eecch--hhcc-cc-eeEEEEeCCC--CC--CCCCCCC------------CcceeEEeceecccCHHHH
Q 008422 116 IVNQEGTLWW-HAHFS--MLRA-TV-HGALIIRPRS--GH--KYPFPKP------------NKEVPIILGEWWNADIIDV 174 (566)
Q Consensus 116 ~~~~~Gt~wY-H~H~~--~~~~-Gl-~G~liV~~~~--~~--~~~~~~~------------~~e~~l~~~d~~~~~~~~~ 174 (566)
++..+|.++. ..-.. +... .. ...+-..... .. ...++.. ..+..+.+...
T Consensus 306 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~-------- 377 (513)
T 2wsd_A 306 FTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGT-------- 377 (513)
T ss_dssp CGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEE--------
T ss_pred CCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEee--------
Confidence 8544676332 22111 0000 11 1222222111 00 0011100 00111111110
Q ss_pred HHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCC-----
Q 008422 175 AKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDAC----- 249 (566)
Q Consensus 175 ~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~----- 249 (566)
.+ ......++|||+.+. ....+.++.|++++|+|.|.+.. .|.||||||.|+|++.+|.
T Consensus 378 ------~~--~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~~~~~ 441 (513)
T 2wsd_A 378 ------QD--EYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFDIARY 441 (513)
T ss_dssp ------EC--TTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBCHHHH
T ss_pred ------cC--CCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcccccc
Confidence 00 011125789999642 23456889999999999999854 5669999999999998761
Q ss_pred ----------Cc------CcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEc
Q 008422 250 ----------YT------EPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYD 307 (566)
Q Consensus 250 ----------~~------~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ail~y~ 307 (566)
.. ++..+|++.|.||+++.|.++++++||.|.+|||....... +..+.+++.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~------GMm~~~~V~ 509 (513)
T 2wsd_A 442 QESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDY------DMMRPMDIT 509 (513)
T ss_dssp HHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTT------TCEEEEEEB
T ss_pred cccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhc------CCceeEEEe
Confidence 10 23589999999999999999996589999999999765442 245555554
No 69
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.43 E-value=1.3e-12 Score=140.89 Aligned_cols=260 Identities=13% Similarity=0.077 Sum_probs=155.9
Q ss_pred EEEEEEEEEEEeccCc-----------eeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CceeEEEeC-------cc
Q 008422 26 VEHTFHVKNLTIGRLC-----------RQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSP-YNLTIHWHG-------IF 86 (566)
Q Consensus 26 ~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG-------~~ 86 (566)
.++.|.++.-....+| .....+++||+. .|.|.++.| ++|+||.|... ....++++| ..
T Consensus 172 ~d~~l~l~d~~~~~~g~~~~~~~~~~~~~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~ 249 (534)
T 3abg_A 172 FDIPMILTSKQYTANGNLVTTNGELNSFWGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLP 249 (534)
T ss_dssp HSCCEEEEEECBCSSSCBCCCTTCSSCCCCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCC
T ss_pred ceEEEEEeeeeecCCCceeccCCCCccccCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCcc
Confidence 3455666655443332 235688999985 599999985 99999999974 456888876 33
Q ss_pred ccCCCCCCCCC-----CCCCCcCCCCCeeEEEEEeCCCCc-ceeEeecchhhc-----c---cceeEEEEeCCCCC----
Q 008422 87 QLLSAWADGPS-----MITQCPITPGNSYTYKFRIVNQEG-TLWWHAHFSMLR-----A---TVHGALIIRPRSGH---- 148 (566)
Q Consensus 87 ~~~~~~~DG~~-----~vtq~~i~PG~~~~Y~f~~~~~~G-t~wYH~H~~~~~-----~---Gl~G~liV~~~~~~---- 148 (566)
....+ .||.. .+....|.|||+++..+++...+| +||......... . ...+.+-.......
T Consensus 250 ~~vIa-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 328 (534)
T 3abg_A 250 FKVIA-SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD 328 (534)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSC
T ss_pred EEEEE-eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCC
Confidence 33333 48853 345567999999999999854467 588765321110 0 11122222211110
Q ss_pred CCCCCCCCcceeEEeceecccCHHHHHHHHHhcCCCCCCCceEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEeccc
Q 008422 149 KYPFPKPNKEVPIILGEWWNADIIDVAKQAQATGGGPNISDAYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAAL 228 (566)
Q Consensus 149 ~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~ 228 (566)
....+....... ..+- .... .....-+ .....|+|||+.... ......++++.|++++|.|.|.+.
T Consensus 329 ~~~~P~~L~~~~--~p~~-~~~~----~~~~~~~---~~~~~w~iNG~~f~~----~~~p~l~~v~~G~~~~w~i~N~~~ 394 (534)
T 3abg_A 329 TSVVPANLRDVP--FPSP-TTNT----PRQFRFG---RTGPTWTINGVAFAD----VQNRLLANVPVGTVERWELINAGN 394 (534)
T ss_dssp CCCCCCCCCCCS--CCCC-CCCC----CEEEECS---CCCSTTCCCCBTTBC----TTSCCCCEECTTCEEEEEEEECSS
T ss_pred CCCCccccccCC--CCCC-cccc----ceEEEEe---ccCceeEECCcccCC----CCCcceeeccCCCEEEEEEEcCCC
Confidence 000000000000 0000 0000 0000000 011257899995421 011234679999999999999986
Q ss_pred CceEEEEEcCCeEEEEEe-cCC---CcC---cEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCCCCCCCCcceE
Q 008422 229 NNQLFFKIANHNFTVVAI-DAC---YTE---PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTR 301 (566)
Q Consensus 229 ~~~~~~~l~gh~~~via~-DG~---~~~---p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~~~~~~~~~~~ 301 (566)
...|.||||||.|+|++. +|. ... ...+||+.|.||+++.|.+.+.++||.|.+|||....... +..
T Consensus 395 ~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~------GMm 468 (534)
T 3abg_A 395 GWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDH------DMM 468 (534)
T ss_dssp SCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHT------TCE
T ss_pred CCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhc------CCc
Confidence 556679999999999998 663 111 2568999999999999999843389999999999765431 245
Q ss_pred EEEEEcC
Q 008422 302 GIVVYDG 308 (566)
Q Consensus 302 ail~y~~ 308 (566)
+.+++..
T Consensus 469 ~~~~V~~ 475 (534)
T 3abg_A 469 AAFNATV 475 (534)
T ss_dssp EEEEECS
T ss_pred eEEEEEe
Confidence 5566654
No 70
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.41 E-value=9.2e-13 Score=111.92 Aligned_cols=105 Identities=21% Similarity=0.151 Sum_probs=80.2
Q ss_pred EEEEEEEEEEEe-----ccCceeEEE-EEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCC
Q 008422 26 VEHTFHVKNLTI-----GRLCRQQTI-TAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMI 99 (566)
Q Consensus 26 ~~~~l~~~~~~~-----~~~g~~~~~-~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~v 99 (566)
++|.+.+.+... ..+|..... .+||+++++|.|++++||+|+++++|.... +||+.... .|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc---
Confidence 345666555543 234555555 489999988999999999999999999765 55554432 222
Q ss_pred CCCcCCCCCeeEEEEEeCCCCcceeEeecchhhcccceeEEEEeC
Q 008422 100 TQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRATVHGALIIRP 144 (566)
Q Consensus 100 tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 144 (566)
+..+.||++++|.|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3569999999999997 899999999998876556999999964
No 71
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.38 E-value=4.6e-11 Score=129.25 Aligned_cols=241 Identities=15% Similarity=0.094 Sum_probs=147.9
Q ss_pred EEEEEECCCCC----------------CCeEEEecCCEEEEEEEeCCC-CceeEEEeCccccCCCCCCCCC----CCCCC
Q 008422 44 QTITAVNGSLP----------------GPTIRVHEGDTLIVHVFNKSP-YNLTIHWHGIFQLLSAWADGPS----MITQC 102 (566)
Q Consensus 44 ~~~~~~NG~~p----------------GP~i~~~~Gd~v~v~v~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~vtq~ 102 (566)
...+++||+.. .++|++++|+++++||.|... ....++++|....... .||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 35678999742 379999999999999999974 4568999888766554 59975 23446
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEeecchhh-----cccceeEEEEeCCCCCCCCCCCC--CcceeEEece--ecccC--H
Q 008422 103 PITPGNSYTYKFRIVNQEGTLWWHAHFSML-----RATVHGALIIRPRSGHKYPFPKP--NKEVPIILGE--WWNAD--I 171 (566)
Q Consensus 103 ~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~~~~~~--~~e~~l~~~d--~~~~~--~ 171 (566)
.|.|||+++..++++...|.||..+..... ..+..-+++.........|-... +.+. .+.+ ..... .
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 799999999999986668999999876431 11222233443322111110000 0000 0000 00000 0
Q ss_pred HHHHHHH-----HhcCCCCCCCceEEEcCCCCCCCCCC--------C-----CCeeEEEE----ECCcEEEEEEEeccc-
Q 008422 172 IDVAKQA-----QATGGGPNISDAYTINGRPGDLYPCS--------Q-----NQTYTLKV----ETGKTYLLRIINAAL- 228 (566)
Q Consensus 172 ~~~~~~~-----~~~g~~~~~~~~~liNG~~g~~~~~~--------~-----~~~~~~~v----~~G~~~rlRliN~~~- 228 (566)
....... ..-+ ....-.+.|||......... + ...-.+.+ +.|++|.|-|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 0000000 0000 01122577898854210000 0 01112334 359999999999872
Q ss_pred CceEEEEEcCCeEEEEEecCC------------CcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccC
Q 008422 229 NNQLFFKIANHNFTVVAIDAC------------YTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 290 (566)
Q Consensus 229 ~~~~~~~l~gh~~~via~DG~------------~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~ 290 (566)
...|.||||||.|+|++.+.+ +..|...|++.+.|++.+.|.++++ +||.|.+|||.....
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~~H~ 532 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIAWHA 532 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSHHHH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcHHHh
Confidence 236679999999999998432 2357899999999999999999999 899999999986543
No 72
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.32 E-value=3.6e-12 Score=114.24 Aligned_cols=98 Identities=16% Similarity=0.193 Sum_probs=69.7
Q ss_pred ceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCC------CCCC-CCcCCCCC--eeE
Q 008422 41 CRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGP------SMIT-QCPITPGN--SYT 111 (566)
Q Consensus 41 g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~------~~vt-q~~i~PG~--~~~ 111 (566)
|.....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+..+.+.. ++.. ...|.||+ +.+
T Consensus 47 ~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t 123 (154)
T 2cal_A 47 GFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTD 123 (154)
T ss_dssp TSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEE
T ss_pred CCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEEE
Confidence 444445556665 5799999999999999999732 3356666655444432210 0000 02689999 999
Q ss_pred EEEEeCCCCcceeEeecchhhcc-cceeEEEEe
Q 008422 112 YKFRIVNQEGTLWWHAHFSMLRA-TVHGALIIR 143 (566)
Q Consensus 112 Y~f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~ 143 (566)
|.|++ ++|+||||||..++.. ||.|.|+|+
T Consensus 124 ~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 124 FTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 99985 8999999999877766 999999984
No 73
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.29 E-value=9.1e-11 Score=129.60 Aligned_cols=94 Identities=18% Similarity=0.152 Sum_probs=75.6
Q ss_pred eEEEcCCCCCCCCCCCCCeeEEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCc------------------
Q 008422 190 AYTINGRPGDLYPCSQNQTYTLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYT------------------ 251 (566)
Q Consensus 190 ~~liNG~~g~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~------------------ 251 (566)
.+.+|++... ....+.++.|++++|.|+|.+... |.||||||.|+|++.+|...
T Consensus 460 ~~~~n~~~~~-------~~~~~~~~~g~~~~w~i~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~ 531 (612)
T 3gyr_A 460 TYRRTARTFN-------DGLGFTIGEGTHEQWTFLNLSPIL-HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDP 531 (612)
T ss_dssp EEEEEECSTT-------SCCCEEEETTCEEEEEEEECSSSC-EEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEE
T ss_pred cccccCccCC-------CCcceEeCCCCEEEEEEEcCCCCC-cCEeECCCcEEEEeecCCcCcccccccccccccccccc
Confidence 5677877432 446788999999999999998655 55999999999998776321
Q ss_pred ---------CcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeecccCC
Q 008422 252 ---------EPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 291 (566)
Q Consensus 252 ---------~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~~~ 291 (566)
++..+||+.|.+|+.+.|.+++.++||.|.+|||.+....
T Consensus 532 ~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed 580 (612)
T 3gyr_A 532 DTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHED 580 (612)
T ss_dssp EEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHH
T ss_pred ccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHh
Confidence 2335899999999999999996668999999999976543
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.23 E-value=2.6e-11 Score=130.14 Aligned_cols=96 Identities=20% Similarity=0.274 Sum_probs=74.6
Q ss_pred CceeEEEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCC
Q 008422 40 LCRQQTITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQ 119 (566)
Q Consensus 40 ~g~~~~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~ 119 (566)
++++..++++|+++++|.|++++||+|+++|+|.+...-. +||+.... .|+ +..+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4578889999999999999999999999999998643111 35554432 232 1569999999999998 89
Q ss_pred CcceeEeecchh-hc-ccceeEEEEeCCC
Q 008422 120 EGTLWWHAHFSM-LR-ATVHGALIIRPRS 146 (566)
Q Consensus 120 ~Gt~wYH~H~~~-~~-~Gl~G~liV~~~~ 146 (566)
+|+||||||... .. .||.|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 999999999422 22 2999999999764
No 75
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.13 E-value=1.6e-10 Score=96.71 Aligned_cols=79 Identities=18% Similarity=0.324 Sum_probs=62.5
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc
Q 008422 50 NGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF 129 (566)
Q Consensus 50 NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (566)
+.++..+.|++++||+|++ +|..+.++++|+++. +||.....+..|.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3445568999999999655 699888899999863 2565544455689999988887 579999999988
Q ss_pred hhhcccceeEEEEe
Q 008422 130 SMLRATVHGALIIR 143 (566)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (566)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 899999984
No 76
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.10 E-value=1.1e-10 Score=103.11 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=71.3
Q ss_pred eEEEccCCCEEEEEEEeCCccCCC-CCceeeeCCcEEEEE------eCCCCCCcccccccccC--CCCCcceeEEeCCCc
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLE-NHPMHVHGFDFHVLA------QGFGNFDAARDRQKFNL--VNPQRRNTIAVPVGG 512 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~-~HP~HlHG~~F~Vl~------~g~g~~~~~~~~~~~n~--~~p~~rDTv~vp~~g 512 (566)
..+.++.|++|+|+|.|.+. . .|.||+|+....+.. ...+. ...+.. ....++||..|.|+.
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~g~------~~~~~p~~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSA---VQQHNWILVKGGEAEAANIANAGLSAGP------AANYLPADKSNIIAESPLANGNE 105 (139)
T ss_dssp SEEEECTTCEEEEEEECCCS---SCCBCCEEESSCHHHHHHHHHHHHHHCG------GGTTCCSCCTTEEEECCCBCTTC
T ss_pred CeEEECCCCEEEEEEEeCCC---CCCeeEEEeccccccchhhhhhhhcccc------cccccCcccccccccccccCCCC
Confidence 45788999999999999753 5 899999986431100 00000 000100 123478999999999
Q ss_pred EEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 513 WAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 513 ~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
...+.|.+++||.|.||||+..|.+ ||+..|+|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999883
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.08 E-value=2.1e-10 Score=95.95 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=65.2
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEe-
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRA- 520 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a- 520 (566)
..+.++.|++|+|+ |.. ...|++|+||..|... .|. .. +...+++..++||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~---~g~-----~~------~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA---SKE-----LA------DKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG---CHH-----HH------HHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc---ccc-----cc------ccccccccccCCCCeEEEEEecC
Confidence 56789999999864 653 3689999999765421 000 00 0012678899999999999998
Q ss_pred cCceeEEEEeecccccccccEEEEEEe
Q 008422 521 NNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 521 dnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
+.||.|.|||| .|..+||++.|.|.
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 79999999999 79999999999985
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.91 E-value=2.1e-09 Score=90.02 Aligned_cols=82 Identities=15% Similarity=0.191 Sum_probs=60.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchh
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM 131 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 131 (566)
+.|++++||+|++ .|....++++|+|+...+. .+|.. ..+...+.||++++|.|+++.++|+||||||.|
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~H- 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPH- 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTTT-
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCCh-
Confidence 7999999999755 5887778888888764421 02210 012235899999999997547899999999933
Q ss_pred hcccceeEEEEe
Q 008422 132 LRATVHGALIIR 143 (566)
Q Consensus 132 ~~~Gl~G~liV~ 143 (566)
...||.|.|+|.
T Consensus 94 ~~~GM~G~i~V~ 105 (106)
T 2gim_A 94 RGAGMVGKITVA 105 (106)
T ss_dssp GGGTCEEEEEEC
T ss_pred hhcCcEEEEEEc
Confidence 233999999996
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.86 E-value=8.6e-09 Score=90.78 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=65.4
Q ss_pred CCCCeEEEecCCEEEEEEEeCCCC-ceeEEEeCcccc--------C------CCCC-CCCCC--CCCCcCCCCCeeEEEE
Q 008422 53 LPGPTIRVHEGDTLIVHVFNKSPY-NLTIHWHGIFQL--------L------SAWA-DGPSM--ITQCPITPGNSYTYKF 114 (566)
Q Consensus 53 ~pGP~i~~~~Gd~v~v~v~N~l~~-~~~iH~HG~~~~--------~------~~~~-DG~~~--vtq~~i~PG~~~~Y~f 114 (566)
|--+.|++++||+|+++|+|.... +++++.++.... . ..+. ++.+. .....|.||+++++.|
T Consensus 32 F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f 111 (139)
T 2aan_A 32 FDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTF 111 (139)
T ss_dssp BSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEE
Confidence 333799999999999999999777 889888874310 0 0000 11010 0112489999999999
Q ss_pred EeCCCCcceeEeecchhhcccceeEEEEe
Q 008422 115 RIVNQEGTLWWHAHFSMLRATVHGALIIR 143 (566)
Q Consensus 115 ~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 143 (566)
++ +++|+|+||||..+...||.|.|+|.
T Consensus 112 ~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 112 TA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 97 79999999999876555999999984
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.74 E-value=3e-08 Score=81.96 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=62.0
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc
Q 008422 50 NGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF 129 (566)
Q Consensus 50 NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (566)
|..|--..|++++||+|++.++|.....+++...+.... ..+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 344433699999999999999999777777766554321 247899999999997 999999999975
Q ss_pred hhhcccceeEEEEe
Q 008422 130 SMLRATVHGALIIR 143 (566)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (566)
|.. .||.|.|+|+
T Consensus 88 H~~-~gM~G~i~Ve 100 (100)
T 4hci_A 88 HLL-KGMEGKVIVK 100 (100)
T ss_dssp TGG-GTCEEEEEEC
T ss_pred ccC-CCCEEEEEEC
Confidence 432 3899999985
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.74 E-value=2.2e-08 Score=83.67 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=62.6
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEe-
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRA- 520 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a- 520 (566)
..+.++.|++|+|+ |.+ ...|.+|+|+..+.. ..|. + ... ..+|++.+.+|+...+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~---~~g~-~----~~~------~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA---KSAD-L----AKS------LSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT---CCHH-H----HHH------HCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc---cccc-c----chh------ccccceeeCCCCEEEEEEecC
Confidence 45788999999886 543 268999999764310 0000 0 000 11467788999999999988
Q ss_pred cCceeEEEEeecccccccccEEEEEEe
Q 008422 521 NNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 521 dnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
+.||.|.|||| .|.++||.+.+.|.
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 78999999999 89999999999985
No 82
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.66 E-value=7e-08 Score=79.34 Aligned_cols=77 Identities=18% Similarity=0.294 Sum_probs=57.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCC----CCCCCcCCCCCeeEEEEEeCCCCcceeEeecchh
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPS----MITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM 131 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~----~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 131 (566)
+.|++++||+|+ ++|....++++|+|+...+ +|.. ..+...+.||+++++.| +++|+|+|||+.|.
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEPHQ 87 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEe---CCCeEEEEEcCCcc
Confidence 799999999876 5798778999999986432 2211 00113589999998877 47999999999443
Q ss_pred hcccceeEEEEe
Q 008422 132 LRATVHGALIIR 143 (566)
Q Consensus 132 ~~~Gl~G~liV~ 143 (566)
..||.|.|+|.
T Consensus 88 -~~gM~G~i~V~ 98 (98)
T 2plt_A 88 -GAGMVGKIIVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -ccCCeEEEEEC
Confidence 23999999984
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.65 E-value=7e-08 Score=85.00 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=70.6
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCC--cEEEE-EeC--CC---CCCcccccccccCCCCCcceeEEeCCCcE
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGF--DFHVL-AQG--FG---NFDAARDRQKFNLVNPQRRNTIAVPVGGW 513 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~--~F~Vl-~~g--~g---~~~~~~~~~~~n~~~p~~rDTv~vp~~g~ 513 (566)
..+.++.|++|+|++.|.+. +.+.|.||++.. .+.-+ ..+ .+ .|-+.. + ....+++|..|.+|..
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~t~~l~pG~~ 105 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP-----D-TPNALAWTAMLNAGES 105 (140)
T ss_dssp SEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT-----T-CTTEEEECCCBCTTEE
T ss_pred CeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc-----c-cccccccceeeCCCce
Confidence 45788999999999999321 237999999853 12100 000 00 000000 0 1124688999999999
Q ss_pred EEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 514 AVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 514 ~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
..+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 106 ~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 106 GSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999999985
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.65 E-value=1.4e-07 Score=83.05 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=64.7
Q ss_pred CCCCeEEEecCCEEEEEEEe--CCCCceeEEEeCcc--cc-----------CCCCC--CCCCCC--CCCcCCCCCeeEEE
Q 008422 53 LPGPTIRVHEGDTLIVHVFN--KSPYNLTIHWHGIF--QL-----------LSAWA--DGPSMI--TQCPITPGNSYTYK 113 (566)
Q Consensus 53 ~pGP~i~~~~Gd~v~v~v~N--~l~~~~~iH~HG~~--~~-----------~~~~~--DG~~~v--tq~~i~PG~~~~Y~ 113 (566)
|--+.|++++||+|+++|+| .....++++.+... .. ...+. ++.+.+ ....|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33379999999999999999 66778888887421 00 00000 010000 01348999999999
Q ss_pred EEeCCCCcceeEeecchhhcc-cceeEEEEeC
Q 008422 114 FRIVNQEGTLWWHAHFSMLRA-TVHGALIIRP 144 (566)
Q Consensus 114 f~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~ 144 (566)
|++ +.+|+|||||+..+... ||.|.|+|.|
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 998 88999999999866655 9999999974
No 85
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.59 E-value=8.8e-08 Score=83.32 Aligned_cols=79 Identities=15% Similarity=0.251 Sum_probs=56.4
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc
Q 008422 50 NGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF 129 (566)
Q Consensus 50 NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (566)
+..|--+.|++++||+|++ +|....++++++.... +|........+.||++++|.| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 3444337999999999865 5887777777765422 222222223588999998887 579999999977
Q ss_pred hhhcccceeEEEEe
Q 008422 130 SMLRATVHGALIIR 143 (566)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (566)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 54 999999984
No 86
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.55 E-value=2.3e-07 Score=76.22 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=55.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|++ +|....+++++.++...++.. .++.. .....+.||+++++.| +++|+|+|||+.|. ..|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H~-~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPHR-GAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCcc-ccC
Confidence 6999999999765 587767899998875432100 00000 0123589999998877 57999999999443 239
Q ss_pred ceeEEEEe
Q 008422 136 VHGALIIR 143 (566)
Q Consensus 136 l~G~liV~ 143 (566)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 87
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.51 E-value=2.2e-07 Score=75.17 Aligned_cols=73 Identities=21% Similarity=0.327 Sum_probs=54.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|++ .|....+++++.++.... + .....+.||+++++.| +++|+|||||+.|.. .|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~~------~---~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~~-~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPEL------S---HKDLAFSPGETFEATF---SEPGTYTYYCEPHRG-AG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGGG------C---EEEEECSTTCEEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCcc------C---cccceeCCCCEEEEEe---CCCEEEEEEeCCCcc-CC
Confidence 7999999999765 587667889988873110 0 1113589999988876 679999999995433 39
Q ss_pred ceeEEEEe
Q 008422 136 VHGALIIR 143 (566)
Q Consensus 136 l~G~liV~ 143 (566)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 88
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.51 E-value=3.6e-07 Score=74.99 Aligned_cols=80 Identities=23% Similarity=0.309 Sum_probs=59.4
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|.|+ |.+ ...|.+|+|+..+- +. .... ..+|+..+.+|+...+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~---------~~~~------~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD---------TAAK------LSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH---------HHHH------HCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc---------cccc------ccccccccCCCCEEEEEc--C
Confidence 45789999999987 543 26899999864311 00 0000 126788899999888876 7
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||| .|..+||.+.+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999883
No 89
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.49 E-value=3.4e-07 Score=75.18 Aligned_cols=81 Identities=17% Similarity=0.204 Sum_probs=60.0
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+| .|.+ ...|.+|+|+..+- ..++. ...++|+..+.+|+...++| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p------~~~~~----------~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP------SGVNA----------DAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECS---SCCEEEEECGGGSC------TTCCH----------HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCC------Ccccc----------ccccccceecCCCCEEEEEe--C
Confidence 4578999999988 4543 26899999975210 00110 00247889999999888876 5
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||| .|.++||.+.+.|+
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999883
No 90
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.46 E-value=4.7e-07 Score=73.16 Aligned_cols=73 Identities=25% Similarity=0.366 Sum_probs=56.9
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|.|+ |.+ ...|.+|+|+.. +...++..+++|+...+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--C
Confidence 45788999999886 543 268999988620 0124677888998877766 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||| .|..+||.+.+.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 8999999999 89999999999873
No 91
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.45 E-value=3e-07 Score=75.31 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=54.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCC--CCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSM--ITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLR 133 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~--vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~ 133 (566)
+.|++++||+| ++.|....+++++.++...+ +|..+ .....+.||+++++.| .++|+|+|||+.|. .
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~-~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPHR-G 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSSTT-T
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccChh-h
Confidence 69999999996 55687666788888765431 12100 0123589999988876 67999999999443 2
Q ss_pred ccceeEEEEe
Q 008422 134 ATVHGALIIR 143 (566)
Q Consensus 134 ~Gl~G~liV~ 143 (566)
.||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 3999999984
No 92
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.44 E-value=6.1e-07 Score=73.77 Aligned_cols=77 Identities=10% Similarity=0.178 Sum_probs=55.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCC----C--CCCCcCCCCCeeEEEEEeCCCCcceeEeecc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPS----M--ITQCPITPGNSYTYKFRIVNQEGTLWWHAHF 129 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (566)
+.|++++||+|+ ++|....+++++.++...+ +|.. + .....+.||+++++.| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 699999999865 4888777888887764321 2211 0 1113479999988876 479999999994
Q ss_pred hhhcccceeEEEEe
Q 008422 130 SMLRATVHGALIIR 143 (566)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (566)
|. ..||.|.|+|+
T Consensus 87 H~-~~gM~G~i~V~ 99 (99)
T 1plc_A 87 HQ-GAGMVGKVTVN 99 (99)
T ss_dssp GT-TTTCEEEEEEC
T ss_pred Cc-ccCCEEEEEEC
Confidence 43 23999999984
No 93
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.44 E-value=5.5e-07 Score=74.48 Aligned_cols=82 Identities=15% Similarity=0.090 Sum_probs=53.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccC-C-CCCCCCCCC--CCCcCCCCCeeEEEEEeCCCCcceeEeecchh
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLL-S-AWADGPSMI--TQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM 131 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~-~-~~~DG~~~v--tq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 131 (566)
+.|++++||+|+ +.|....+++++.+.-.... . ..++..+++ +...+.||+++++.| .++|+|+|||+.|
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H- 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCTPH- 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECSTT-
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeCCC-
Confidence 799999999976 55887677887776311000 0 000000111 223589999988877 6799999999933
Q ss_pred hcccceeEEEEe
Q 008422 132 LRATVHGALIIR 143 (566)
Q Consensus 132 ~~~Gl~G~liV~ 143 (566)
...||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 223999999984
No 94
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.42 E-value=5e-07 Score=77.61 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=52.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|++.+.|. ++++..+... +-||.. ...+.||++++|.| +.+|+|||||..|. ..|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~-----~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H~-~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGG-----APEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPHV-GMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTC-----SCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCc-----CCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 799999999977666553 4444333211 113321 13467999988877 57999999998653 349
Q ss_pred ceeEEEEeCCC
Q 008422 136 VHGALIIRPRS 146 (566)
Q Consensus 136 l~G~liV~~~~ 146 (566)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 95
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.42 E-value=7.7e-07 Score=73.16 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=55.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCC------CCCCCcCCCCCeeEEEEEeCCCCcceeEeecc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPS------MITQCPITPGNSYTYKFRIVNQEGTLWWHAHF 129 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~------~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~ 129 (566)
+.|++++||+|+ ++|....+++++.++...+ +|.. ......+.||+++++.| +++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKIT--FKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 689999999864 5788777888888875321 2221 01123579999988877 479999999994
Q ss_pred hhhcccceeEEEEe
Q 008422 130 SMLRATVHGALIIR 143 (566)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (566)
|. ..||.|.|+|.
T Consensus 87 H~-~~gM~G~i~V~ 99 (99)
T 1byp_A 87 HA-GAGMVGKVTVN 99 (99)
T ss_dssp GT-TTTCEEEEEEC
T ss_pred cc-ccCCEEEEEEC
Confidence 32 23999999984
No 96
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.42 E-value=7.5e-07 Score=76.08 Aligned_cols=75 Identities=12% Similarity=0.083 Sum_probs=52.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
..|++++||+|++.+.| .++++..+.. .+-+|.. ...+.||++++|.| +.+|+|||+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~f~~~~---~~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H~~-~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD---KSHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPHFG-MG 85 (123)
T ss_dssp SEEEECTTEEEEEEESS---TTCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGGTT-TT
T ss_pred CEEEECCCCEEEEEECC---CCceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCCc-CC
Confidence 69999999998887776 2344333321 1113321 23467999888888 579999999995543 38
Q ss_pred ceeEEEEeCC
Q 008422 136 VHGALIIRPR 145 (566)
Q Consensus 136 l~G~liV~~~ 145 (566)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.38 E-value=2.7e-07 Score=75.63 Aligned_cols=79 Identities=18% Similarity=0.314 Sum_probs=58.4
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|.|+ |.+ ...|.+++++..+ ..+ ... ..+++..+.+|+...+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~~~------~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------APA------LSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------HHH------HCBCCCCCSCSCCEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------ccc------ccccceecCCCCEEEEEe--C
Confidence 45788999999886 543 2689999986543 000 000 114667788888877766 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||+ .|.++||.+.+.|+
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 99999999999873
No 98
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.35 E-value=2e-06 Score=72.36 Aligned_cols=75 Identities=17% Similarity=0.289 Sum_probs=57.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|+.|+|++.|.+. ..|-|++... .-+..++||+...+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSP---ISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS---SCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECCC---CeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 56789999999999999642 3344333211 1156789999999999999
Q ss_pred CceeEEEEeecccccccccEEEEEEec
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVEN 548 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~~ 548 (566)
.||.|.||||+..|... |.+.++|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999887554 999998863
No 99
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.33 E-value=2.3e-06 Score=72.99 Aligned_cols=75 Identities=9% Similarity=-0.006 Sum_probs=52.3
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
..|++++||+|++. |.. .++++..+.... -+|. ....+.||++++|.| +.+|+|+|||-.|.. .|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H~~-~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPHYG-MG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCCCc-CC
Confidence 69999999997554 553 566665553211 1332 123467999988877 579999999975433 39
Q ss_pred ceeEEEEeCC
Q 008422 136 VHGALIIRPR 145 (566)
Q Consensus 136 l~G~liV~~~ 145 (566)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999864
No 100
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.29 E-value=2.8e-06 Score=69.94 Aligned_cols=73 Identities=19% Similarity=0.409 Sum_probs=57.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|++.|.+. ..|.|.+.+..+ ...+.||....+.|+++
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~---~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGK---SEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPK 76 (100)
T ss_dssp SEEEECTTSCEEEEEEECSS---SCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCC
T ss_pred CEEEECCCCEEEEEEEcCCC---ceEEEEEecCCc----------------------------ceeecCCcceeEEEecc
Confidence 45789999999999999643 456665543321 23467888889999999
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|+|. .|...||.+.+.|+
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCceEEEECc--cccCCCCEEEEEEC
Confidence 9999999996 69999999999884
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.24 E-value=2.2e-06 Score=70.34 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=59.0
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+| .|.+ ...|.+|+++..|- . | ++.. .. ...+|++.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~~--~~------~~~~~~~~~~~G~~~~~~f--~ 75 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDVT--KI------SMPEEDLLNAPGEEYSVTL--T 75 (99)
T ss_dssp SEEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCHH--HH------SCCTTCCBCSTTCEEEEEE--C
T ss_pred CEEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-cccc--cc------cccccceeeCCCCEEEEEe--C
Confidence 4568899999888 4543 26899999975431 0 0 1100 00 1225667888998887776 5
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||+ .|.++||.+.+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999 89999999999873
No 102
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.21 E-value=3.5e-06 Score=72.56 Aligned_cols=89 Identities=12% Similarity=0.147 Sum_probs=59.4
Q ss_pred CeEEEecC-CEEEEEEEeCCCCc-----ee--EEEeCcccc----------CCCCC-CCCCCC--CCCcCCCCCeeEEEE
Q 008422 56 PTIRVHEG-DTLIVHVFNKSPYN-----LT--IHWHGIFQL----------LSAWA-DGPSMI--TQCPITPGNSYTYKF 114 (566)
Q Consensus 56 P~i~~~~G-d~v~v~v~N~l~~~-----~~--iH~HG~~~~----------~~~~~-DG~~~v--tq~~i~PG~~~~Y~f 114 (566)
..|.|++| |+|+|+|+|....+ ++ |--+|.... ...+. .+.+.+ ....|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 59999999 99999999986532 43 333331100 00000 011110 012479999999999
Q ss_pred EeC--CCCcceeEeecchhhcccceeEEEEeC
Q 008422 115 RIV--NQEGTLWWHAHFSMLRATVHGALIIRP 144 (566)
Q Consensus 115 ~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 144 (566)
+++ .++|+|||.|-..+...||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 983 389999999987776669999999963
No 103
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.21 E-value=6e-06 Score=68.71 Aligned_cols=73 Identities=16% Similarity=0.306 Sum_probs=51.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|++ .|.....+++....... |........+.||+++++.| +++|+|+|+|-.|. |
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---~ 98 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---F 98 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---T
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---C
Confidence 7999999999765 48766566655543221 11111112478999988877 57899999998754 8
Q ss_pred ceeEEEEe
Q 008422 136 VHGALIIR 143 (566)
Q Consensus 136 l~G~liV~ 143 (566)
|.|.|+|+
T Consensus 99 M~G~I~V~ 106 (106)
T 1id2_A 99 MRGKVIVE 106 (106)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.20 E-value=7.5e-06 Score=67.03 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=53.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCC----CCCCcCCCCCeeEEEEEeCCCCcceeEeecchh
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSM----ITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSM 131 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~----vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~ 131 (566)
+.|++++||+|++ .|....++++....-..+ +|.-. .+...+.||+++++.| +++|+|+|+|-.|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~p-----~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAVP-----AGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCCc-----cccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 7999999999665 587666777776642211 22210 0012489999988877 67999999998754
Q ss_pred hcccceeEEEEe
Q 008422 132 LRATVHGALIIR 143 (566)
Q Consensus 132 ~~~Gl~G~liV~ 143 (566)
. .||.|.|+|+
T Consensus 88 ~-~gM~G~I~V~ 98 (98)
T 1iuz_A 88 G-AGMKMTITVQ 98 (98)
T ss_dssp G-GTCEEEEEEC
T ss_pred c-CCCEEEEEEC
Confidence 3 3999999984
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.18 E-value=7.1e-06 Score=73.57 Aligned_cols=92 Identities=10% Similarity=0.113 Sum_probs=60.5
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCCCc-----eeE--EEeCccc---------cCCCC---CCCCCCCCCCcCCCCCeeE
Q 008422 52 SLPGPTIRV-HEGDTLIVHVFNKSPYN-----LTI--HWHGIFQ---------LLSAW---ADGPSMITQCPITPGNSYT 111 (566)
Q Consensus 52 ~~pGP~i~~-~~Gd~v~v~v~N~l~~~-----~~i--H~HG~~~---------~~~~~---~DG~~~vtq~~i~PG~~~~ 111 (566)
+|--..|+| +.||+|+|+|+|....+ +++ --+|... ....+ .|.........|.||++.+
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 343259999 99999999999997543 332 2233110 00000 0110000012489999999
Q ss_pred EEEEeCC--CCcceeEeecchhhcccceeEEEEeC
Q 008422 112 YKFRIVN--QEGTLWWHAHFSMLRATVHGALIIRP 144 (566)
Q Consensus 112 Y~f~~~~--~~Gt~wYH~H~~~~~~Gl~G~liV~~ 144 (566)
+.|++ . ++|+|||+|-..+...||.|.|+|.+
T Consensus 134 vtf~~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDP-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECG-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEec-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 99987 5 89999999988777669999999963
No 106
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.13 E-value=8.4e-06 Score=69.62 Aligned_cols=75 Identities=11% Similarity=0.129 Sum_probs=49.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|++ .|... ++++..+. ...-||... ....||++++|.| +.+|+|+|+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESIK-----DMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHYA-MG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECT-----TCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCccc-CC
Confidence 7999999999765 45432 44443321 111133211 2356999877776 579999999975433 39
Q ss_pred ceeEEEEeCC
Q 008422 136 VHGALIIRPR 145 (566)
Q Consensus 136 l~G~liV~~~ 145 (566)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 107
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.10 E-value=5.5e-06 Score=68.38 Aligned_cols=86 Identities=12% Similarity=0.084 Sum_probs=57.9
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|+ |.+ ...|.++++.-... .+.+.... .......+++.+.+|+...+.| +
T Consensus 17 ~~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASEL------KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp SEEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHHH------HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccchh------hcccccccceecCCCCEEEEEe--C
Confidence 45789999999986 543 26899998731100 00000000 0011224667788888877766 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||+ .|.++||.+.+.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999883
No 108
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.06 E-value=9.1e-06 Score=69.41 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=49.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|+ |.|... ++++..+. ..+-||... ..+.||++++|.| +.+|+|+|+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHYM-MG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTTT-TT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCccc-cC
Confidence 799999999965 455533 44443331 111133211 2367999887776 579999999985433 39
Q ss_pred ceeEEEEeCC
Q 008422 136 VHGALIIRPR 145 (566)
Q Consensus 136 l~G~liV~~~ 145 (566)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 109
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.02 E-value=2e-05 Score=67.79 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=57.6
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCc-----eeEE--EeCcccc----------CCCC---CCCCCCCCCCcCCCCCeeEEEE
Q 008422 56 PTIRV-HEGDTLIVHVFNKSPYN-----LTIH--WHGIFQL----------LSAW---ADGPSMITQCPITPGNSYTYKF 114 (566)
Q Consensus 56 P~i~~-~~Gd~v~v~v~N~l~~~-----~~iH--~HG~~~~----------~~~~---~DG~~~vtq~~i~PG~~~~Y~f 114 (566)
..|.| ++||+|+|+|+|....+ +++- -+|.... ...+ .|..-......|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 59999 99999999999997543 4433 2331100 0000 0110000012479999999999
Q ss_pred EeCC--CCcc-eeEeecchhhcccceeEEEEe
Q 008422 115 RIVN--QEGT-LWWHAHFSMLRATVHGALIIR 143 (566)
Q Consensus 115 ~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 143 (566)
++ . .+|+ |||.|-..+...||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 98 DV-SKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EG-GGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred ec-cccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 98 5 5665 999998777777999999985
No 110
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.97 E-value=3e-05 Score=81.60 Aligned_cols=87 Identities=15% Similarity=0.253 Sum_probs=63.3
Q ss_pred EEEEECCCCCCCeEEEecCCEEEEEEEeCC---CCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCc
Q 008422 45 TITAVNGSLPGPTIRVHEGDTLIVHVFNKS---PYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEG 121 (566)
Q Consensus 45 ~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l---~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~G 121 (566)
.+...+-.|--+.|++++||+|++.++|.. +..+++...++.. ..-+.||++.++.|++ +++|
T Consensus 547 ~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI-------------K~DaiPGrtnsvtFta-dkPG 612 (638)
T 3sbq_A 547 YMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV-------------SMEISPQQTSSITFVA-DKPG 612 (638)
T ss_dssp EEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------EEEECTTCEEEEEEEC-CSCE
T ss_pred EEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc-------------eeeeCCCCeEEEEEEc-CCCE
Confidence 344445555557999999999999999973 3344433332211 1247899999999998 9999
Q ss_pred ceeEeecchhhcc--cceeEEEEeCC
Q 008422 122 TLWWHAHFSMLRA--TVHGALIIRPR 145 (566)
Q Consensus 122 t~wYH~H~~~~~~--Gl~G~liV~~~ 145 (566)
+|||+|....... +|.|.|+|+|+
T Consensus 613 vY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 613 LHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp EEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred EEEEECCCcCCCCcccceEEEEEecC
Confidence 9999998643332 89999999874
No 111
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.96 E-value=3.4e-05 Score=66.23 Aligned_cols=87 Identities=13% Similarity=0.194 Sum_probs=58.2
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCc-----eeEEEe--Cc---------cc-cCCCC---CCCCCCCCCCcCCCCCeeEEEE
Q 008422 56 PTIRV-HEGDTLIVHVFNKSPYN-----LTIHWH--GI---------FQ-LLSAW---ADGPSMITQCPITPGNSYTYKF 114 (566)
Q Consensus 56 P~i~~-~~Gd~v~v~v~N~l~~~-----~~iH~H--G~---------~~-~~~~~---~DG~~~vtq~~i~PG~~~~Y~f 114 (566)
..|.| +.|++|+|+|+|....+ +++-+- +. .. ....+ .|..-......|.||+++++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 58999 99999999999997553 544332 10 00 00000 0110000012479999999999
Q ss_pred EeCC--CCcc-eeEeecchhhcccceeEEEEe
Q 008422 115 RIVN--QEGT-LWWHAHFSMLRATVHGALIIR 143 (566)
Q Consensus 115 ~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 143 (566)
++ . ++|+ |+|.|-..+...||.|.|+|.
T Consensus 97 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 127 (128)
T 2iaa_C 97 DV-SKLKEGEDYAFFCSFPGHWSIMKGTIELG 127 (128)
T ss_dssp ES-SCCCTTCCEEEECCSTTCTTTSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEe
Confidence 97 5 7885 999998877777999999985
No 112
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.92 E-value=1.6e-05 Score=65.14 Aligned_cols=83 Identities=17% Similarity=0.194 Sum_probs=57.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+| .|.+ ...|.++++...+- . + .+.. .. ...++.+.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~--~-~~~~--~~------~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---S--G-VDAS--KI------SMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECS---SCCBCCEECTTSSC---T--T-CCHH--HH------CCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECC---CCceEEEEeCCCCc---c--c-cccc--cc------ccccCccccCCCCEEEEEE--C
Confidence 4678999999988 4543 26899998865320 0 0 0000 00 1124556788888877766 6
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||+ .|..+||.+.+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999873
No 113
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.91 E-value=2.8e-05 Score=66.30 Aligned_cols=73 Identities=14% Similarity=0.179 Sum_probs=49.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecchhhccc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFSMLRAT 135 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~~~~~G 135 (566)
+.|++++||+|++ .|... .++++.... .+-+|.. ...+.||++++|.| +++|+|+|+|-.|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~-----~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKG-----MIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTT-----CSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEccc-----ccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 6999999998655 56543 444444331 1113321 12467999988887 578999999987544
Q ss_pred ceeEEEEeCC
Q 008422 136 VHGALIIRPR 145 (566)
Q Consensus 136 l~G~liV~~~ 145 (566)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 8999999864
No 114
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.90 E-value=4.8e-05 Score=65.27 Aligned_cols=87 Identities=13% Similarity=0.144 Sum_probs=57.6
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCc-----eeEEE--eCccc-------cCCCCCCCCC----C-C-CCCcCCCCCeeEEEE
Q 008422 56 PTIRV-HEGDTLIVHVFNKSPYN-----LTIHW--HGIFQ-------LLSAWADGPS----M-I-TQCPITPGNSYTYKF 114 (566)
Q Consensus 56 P~i~~-~~Gd~v~v~v~N~l~~~-----~~iH~--HG~~~-------~~~~~~DG~~----~-v-tq~~i~PG~~~~Y~f 114 (566)
..|.| ++||+|+|+|+|....+ +++-. .|... .....+|=++ . + ....|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 58999 99999999999997543 44333 22110 0000001001 0 0 012489999999999
Q ss_pred EeCC--CCcc-eeEeecchhhcccceeEEEEe
Q 008422 115 RIVN--QEGT-LWWHAHFSMLRATVHGALIIR 143 (566)
Q Consensus 115 ~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 143 (566)
++ . .+|+ |||.|-..+...||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 98 DV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 97 5 6776 999998777766999999984
No 115
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.84 E-value=7.3e-05 Score=66.49 Aligned_cols=85 Identities=15% Similarity=0.228 Sum_probs=60.6
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCccee-------EEeCCCc--
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNT-------IAVPVGG-- 512 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDT-------v~vp~~g-- 512 (566)
+.+.++.|++|.+++.|.+. ...|-+-++.. +. .+.. .|...+. ..|.||+
T Consensus 61 p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~-------~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNK--GFGHSFDITKK-------GP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECCT--TCCCCCEEESC-------CS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCCC--CeeeEEEEeec-------Cc-chhc----------cccccccccccccccccCCCCce
Confidence 56899999999999999631 24566655522 11 1100 0001111 2567888
Q ss_pred EEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008422 513 WAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 513 ~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
...+.|++ .||.|.||||+--|..+||-+.+.|+
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999873
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.82 E-value=6.7e-05 Score=80.60 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=61.7
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|++.|.....+..|.|+++++.+. ..+.||....++|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 568899999999999996432235788888865321 3577888999999999
Q ss_pred CceeEEEEee---cccccccccEEEEEEec
Q 008422 522 NPGVWFMHCH---LDVHLPWGLATAFVVEN 548 (566)
Q Consensus 522 npG~w~~HCH---il~H~~~GM~~~~~V~~ 548 (566)
.||.|.|||| ...|. ||.+.++|++
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 9999999999 35675 9999999974
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.60 E-value=0.00023 Score=58.87 Aligned_cols=73 Identities=22% Similarity=0.223 Sum_probs=50.3
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|+ |.+ ...|.+|+|... .|. .. + ++-.+++|+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~-------~~-------~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE-------AA-------L-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------SC-------E-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc-------cc-------c-cccccCCCCEEEEEe--C
Confidence 56789999999885 543 268999987521 010 00 1 112367777666665 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||++ |. ||.+.+.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999998 65 999999873
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.17 E-value=0.0022 Score=54.07 Aligned_cols=88 Identities=11% Similarity=0.163 Sum_probs=53.9
Q ss_pred CCCCeEEEec-CCEEEEEEEeCCCCc-----ee--EEEe---------Ccccc-CCCCC-CCCCCC--CCCcCCCCCeeE
Q 008422 53 LPGPTIRVHE-GDTLIVHVFNKSPYN-----LT--IHWH---------GIFQL-LSAWA-DGPSMI--TQCPITPGNSYT 111 (566)
Q Consensus 53 ~pGP~i~~~~-Gd~v~v~v~N~l~~~-----~~--iH~H---------G~~~~-~~~~~-DG~~~v--tq~~i~PG~~~~ 111 (566)
|--..|.|++ |++|+|+|+|....+ ++ |--. |+..- ...++ .+-+.+ ...-|.||++.+
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 3336999986 999999999997442 33 3211 11110 00111 011110 012379999999
Q ss_pred EEEEeC--CCCcceeEeecchhhcccceeEEEEe
Q 008422 112 YKFRIV--NQEGTLWWHAHFSMLRATVHGALIIR 143 (566)
Q Consensus 112 Y~f~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 143 (566)
..|+.+ ..+|+|.|.|. +.. ||.|.++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 999984 28999999999 444 999999884
No 119
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.03 E-value=0.0018 Score=54.96 Aligned_cols=75 Identities=9% Similarity=0.218 Sum_probs=51.0
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|++.| ..|-+..+.. .+.. .. +.+.+.+++...+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~P~--g~-----------~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD------KSHNVEAIKE----------ILPE--GV-----------ESFKSKINESYTLTV--T 69 (123)
T ss_dssp SEEEECTTEEEEEEESS------TTCCCEECTT----------SSCT--TC-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCceEEEcCC----------cCCC--Cc-----------cceecCCCCEEEEEe--C
Confidence 46789999999998876 2355554421 0100 00 011134666555555 8
Q ss_pred CceeEEEEeecccccccccEEEEEEecC
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
.||.|.|+|- .|..+||.+.+.|.++
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 9999999999 8999999999999863
No 120
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.01 E-value=0.0012 Score=56.29 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=49.9
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|++.| ..|-+..+.. .+... . ..+.+.++....+.| +
T Consensus 23 ~~i~V~~GDtVtf~n~~------~~H~v~~~~~----------~~P~g--~-----------~~f~s~pGet~s~TF--~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD------KGHNSALMKG----------GAPEG--A-----------ETWKGKINEEITVTL--S 71 (127)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------CSCTT--C-----------CCCBCCTTCCCEEEC--C
T ss_pred CEEEECCCCEEEEEECC------CCceEEEccC----------cCCCC--c-----------cceecCCCCEEEEEe--C
Confidence 46789999999998765 2355544321 00000 0 011223566544444 8
Q ss_pred CceeEEEEeecccccccccEEEEEEecCC
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVENGP 550 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~~~~ 550 (566)
.||.|.|||- .|..+||.+.+.|.+.+
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 79999999999998643
No 121
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.00 E-value=0.0026 Score=51.66 Aligned_cols=81 Identities=20% Similarity=0.235 Sum_probs=53.7
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|+ |.+ ...|-+.+....+ ...++. . ....+...+.+|....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~~------p~g~~~----~------~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNA---GFPHNIVFDEDAV------PAGVDA----D------AISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECS---SCCEEEEECTTSS------CTTCCH----H------HHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECC---CCCEEEEEeCCCC------cccccc----c------cccccccccCCCCEEEEEc--C
Confidence 56789999999986 432 2567665543100 000110 0 0113456788888777766 7
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|+|-+ |..+||-+.+.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999986 9999999999873
No 122
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.94 E-value=0.0022 Score=54.42 Aligned_cols=75 Identities=12% Similarity=0.193 Sum_probs=50.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|++.+ ..|-+..+.. .+... .+...+.+|....+.| +
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~ 70 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--E 70 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--C
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--C
Confidence 45789999999998553 3576665421 11100 0112234666555555 8
Q ss_pred CceeEEEEeecccccccccEEEEEEecC
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
.||.|.|||- .|..+||.+.+.|.+.
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 9999999995 8999999999999763
No 123
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.62 E-value=0.0096 Score=51.35 Aligned_cols=74 Identities=15% Similarity=0.293 Sum_probs=52.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecch-hhc-
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFS-MLR- 133 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~~~- 133 (566)
..|.++.|++|++.++|.. .. |+...+. .|. +.-+.||+.-++.|+. +++|+|.|+|... +..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETT----SSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 3333221 121 1236789988999997 9999999999542 122
Q ss_pred ccceeEEEEeC
Q 008422 134 ATVHGALIIRP 144 (566)
Q Consensus 134 ~Gl~G~liV~~ 144 (566)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 28889988863
No 124
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.53 E-value=0.01 Score=48.86 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=48.9
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|+ |.+ ...|-+++.... .|. . .-++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~-------~~~-------~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE-------D--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------S--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCcEEEEEeCCC-------CCc-------c--------cccccccCCCCEEEEEe--C
Confidence 46789999999987 543 256766654321 000 0 01223466777766666 7
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|+|-+ |. ||.+.+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999999873
No 125
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.32 E-value=0.014 Score=50.06 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=49.7
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|+|+ |.+ ...|-+++.... .|. . .-++-.+.+|....+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~-------~--------~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE-------D--------AFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS-------S--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc-------c--------cccccccCCCCEEEEEc--C
Confidence 46789999999986 543 256777764321 000 0 11233467787777666 7
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
.||.|.|||-+ |. ||-+.+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 89999999986 76 999999873
No 126
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.28 E-value=0.013 Score=49.63 Aligned_cols=36 Identities=19% Similarity=0.508 Sum_probs=29.1
Q ss_pred CCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008422 509 PVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVEN 548 (566)
Q Consensus 509 p~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~ 548 (566)
.+|....+ +++.||.|.|+|- .|..+||.+.+.|.+
T Consensus 59 ~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 59 KINENYVL--TVTQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp CTTCCEEE--ECCSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred CCCCEEEE--EeCCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 35665444 4488999999997 599999999999976
No 127
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.13 E-value=0.027 Score=50.28 Aligned_cols=74 Identities=15% Similarity=0.293 Sum_probs=54.5
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc-hhhcc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF-SMLRA 134 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~~~~ 134 (566)
..|.++.|++|++.++|. +..++...-++.. . .-+.||+.-++.|++ +++|+|++.|.. .|...
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi------------k-~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI------------N-VEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSSC------------E-EEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCCe------------E-EEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 4444433322211 1 235689999999997 999999999984 44433
Q ss_pred -cceeEEEEeC
Q 008422 135 -TVHGALIIRP 144 (566)
Q Consensus 135 -Gl~G~liV~~ 144 (566)
+|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 8999999863
No 128
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.13 E-value=0.026 Score=59.69 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=60.8
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|+.|+|++.|.....+..|.|.+.+.... +.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 467899999999999996422236777766554321 2466788889999999
Q ss_pred CceeEEEEeeccccc-ccccEEEEEEec
Q 008422 522 NPGVWFMHCHLDVHL-PWGLATAFVVEN 548 (566)
Q Consensus 522 npG~w~~HCHil~H~-~~GM~~~~~V~~ 548 (566)
.||.|.+||...-|. +.+|...+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999987664 478999999864
No 129
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.09 E-value=0.015 Score=49.23 Aligned_cols=37 Identities=32% Similarity=0.583 Sum_probs=29.8
Q ss_pred CCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecC
Q 008422 509 PVGGWAVIRFRANNPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 509 p~~g~~virf~adnpG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
.+|....+.| +.||.|.|+|- .|..+||.+.+.|.+.
T Consensus 59 ~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 59 TVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred CCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 4666544444 78999999997 5999999999999753
No 130
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.13 E-value=0.063 Score=45.29 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=46.5
Q ss_pred eEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEec
Q 008422 442 SVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRAN 521 (566)
Q Consensus 442 ~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~ad 521 (566)
..+.++.|++|.|+..+ ..|-+++.. +.+... ... +.+.+|....+.| +
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~----------~~~p~~--~~~-----------~~~~~g~t~~~tF--~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIK----------GMIPDG--AEA-----------FKSKINENYKVTF--T 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECT----------TCSCTT--CCC-----------CBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEcc----------cccCCC--cce-----------eecCCCCEEEEEe--C
Confidence 45788999999987442 246665543 111100 001 1224566555555 8
Q ss_pred CceeEEEEeecccccccccEEEEEEecC
Q 008422 522 NPGVWFMHCHLDVHLPWGLATAFVVENG 549 (566)
Q Consensus 522 npG~w~~HCHil~H~~~GM~~~~~V~~~ 549 (566)
.||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999987 776 9999999763
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.06 E-value=0.11 Score=44.28 Aligned_cols=96 Identities=9% Similarity=0.116 Sum_probs=62.2
Q ss_pred eEEEccCC-CEEEEEEEeCCccC--CCCCceeeeCCcEEEEEeCCCCCCcc-----cccccccCC---C-CCcceeEEeC
Q 008422 442 SVKPLKFN-STVEMILQNTALVV--LENHPMHVHGFDFHVLAQGFGNFDAA-----RDRQKFNLV---N-PQRRNTIAVP 509 (566)
Q Consensus 442 ~~~~~~~g-~~v~~v~~n~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~n~~---~-p~~rDTv~vp 509 (566)
..+.++.| +.+.+++.|.+... .+.|- |-+...+. ++.. ......++. + -....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 45788999 99999999975321 12344 44433221 0000 000000110 0 1133566788
Q ss_pred CCcEEEEEEEec---CceeEEEEeecccccccccEEEEEEe
Q 008422 510 VGGWAVIRFRAN---NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 510 ~~g~~virf~ad---npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
||....+.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999987 8999999999989988 899999985
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.04 E-value=0.11 Score=44.73 Aligned_cols=71 Identities=18% Similarity=0.285 Sum_probs=51.1
Q ss_pred EEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecC
Q 008422 443 VKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANN 522 (566)
Q Consensus 443 ~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn 522 (566)
.+.++.|+.|+|++.|.+ ..|- |.+-+.+ . -+.+.||....+.|+++.
T Consensus 61 ~l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~~-------------------~--k~d~~PG~~~~~~~~~~~ 108 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD----VIHG-------FHVEGTN-------------------I--NVEVLPGEVSTVRYTFKR 108 (135)
T ss_dssp SEEEETTSEEEEEEEBSS----SCEE-------EEETTSS-------------------C--EEEECBTBCEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEeCC----ccce-------EEecCCC-------------------c--eeEeCCCCcEEEEEEcCC
Confidence 467899999999998742 3333 4442110 0 134567777789999999
Q ss_pred ceeEEEEeec---ccccccccEEEEEEe
Q 008422 523 PGVWFMHCHL---DVHLPWGLATAFVVE 547 (566)
Q Consensus 523 pG~w~~HCHi---l~H~~~GM~~~~~V~ 547 (566)
||.|.++|.. ..| .+|-..++|.
T Consensus 109 ~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 109 PGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp CEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred CEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 9999999987 566 5898888875
No 133
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=94.77 E-value=0.067 Score=47.67 Aligned_cols=96 Identities=11% Similarity=0.113 Sum_probs=61.8
Q ss_pred eEEEc-cCCCEEEEEEEeCCccC--CCCCceeeeCCcEEEEEeCCCCCCcc----cccccccCC---C-CCcceeEEeCC
Q 008422 442 SVKPL-KFNSTVEMILQNTALVV--LENHPMHVHGFDFHVLAQGFGNFDAA----RDRQKFNLV---N-PQRRNTIAVPV 510 (566)
Q Consensus 442 ~~~~~-~~g~~v~~v~~n~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~----~~~~~~n~~---~-p~~rDTv~vp~ 510 (566)
..+.+ +.|++|.|+|.|.+... .+.| .|-+...+ .++.. -.....++. + -....+..|.+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~H-------n~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~p 128 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGH-------NLVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGG 128 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCB-------CCEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCT
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccc-------eEEeccCc--chhhhHHHhhhccccccccccccchhccceeeCC
Confidence 45788 89999999999975411 1224 34333321 11000 000000110 0 12345667899
Q ss_pred CcEEEEEEEec--CceeEEEEeecccccccccEEEEEEe
Q 008422 511 GGWAVIRFRAN--NPGVWFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 511 ~g~~virf~ad--npG~w~~HCHil~H~~~GM~~~~~V~ 547 (566)
|....|.|.++ .||.|-|+|-+--|.. ||-+.|.|.
T Consensus 129 Get~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 129 GEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 99999999987 8999999999999988 899999985
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=93.45 E-value=0.42 Score=40.56 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=60.4
Q ss_pred eEEEc-cCCCEEEEEEEeCCccC--CCCCceeeeCCcEEEEEeCCCCCCcc-----cccccccCCC---C-CcceeEEeC
Q 008422 442 SVKPL-KFNSTVEMILQNTALVV--LENHPMHVHGFDFHVLAQGFGNFDAA-----RDRQKFNLVN---P-QRRNTIAVP 509 (566)
Q Consensus 442 ~~~~~-~~g~~v~~v~~n~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~n~~~---p-~~rDTv~vp 509 (566)
..+.+ +.|+.|.+++.|.+... .+.|- |.+...+ .+... ......++.. + ....+..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~-------~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHN-------LVLTKDA--DKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBC-------CEEEEGG--GHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcce-------EEEcCcc--chhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 45778 88999999999976420 12344 4333321 11100 0000001111 0 123455789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeecccccccccEEEEEEe
Q 008422 510 VGGWAVIRFRAN--NPGV-WFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 510 ~~g~~virf~ad--npG~-w~~HCHil~H~~~GM~~~~~V~ 547 (566)
||+...+-|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 7866 999999999988 899999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=92.75 E-value=0.32 Score=41.20 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=60.6
Q ss_pred eEEEc-cCCCEEEEEEEeCCccC--CCCCceeeeCCcEEEEEeCCCCCCcc-----cccccccCC---CC-CcceeEEeC
Q 008422 442 SVKPL-KFNSTVEMILQNTALVV--LENHPMHVHGFDFHVLAQGFGNFDAA-----RDRQKFNLV---NP-QRRNTIAVP 509 (566)
Q Consensus 442 ~~~~~-~~g~~v~~v~~n~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~n~~---~p-~~rDTv~vp 509 (566)
..+.+ +.|+++.+++.|.+... .+.|-| .+...+ .+... ......++. ++ ....|..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~-------vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNV-------VVSKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCC-------EEEETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceE-------EEcccc--chhhHHHhhhhccccccccccccchhhccceeeC
Confidence 45678 78999999999976411 123543 332221 01000 000000111 11 133466789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeecccccccccEEEEEEe
Q 008422 510 VGGWAVIRFRAN--NPGV-WFMHCHLDVHLPWGLATAFVVE 547 (566)
Q Consensus 510 ~~g~~virf~ad--npG~-w~~HCHil~H~~~GM~~~~~V~ 547 (566)
||+...+.|.+. .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999988 8995 999999999998 999999885
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=92.44 E-value=0.65 Score=41.23 Aligned_cols=73 Identities=16% Similarity=0.250 Sum_probs=54.0
Q ss_pred EEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEecC
Q 008422 443 VKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRANN 522 (566)
Q Consensus 443 ~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~adn 522 (566)
.+.++.|+.|++.+.|.+ ..|.|-+=.... . +.+.||....+.|+++.
T Consensus 94 ~l~VP~G~~Vr~~vTS~D----ViHsf~IP~lgi-------------------------k---~da~PG~~n~~~~~~~k 141 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD----VIHGFHVEGTNI-------------------------N---VEVLPGEVSTVRYTFKR 141 (168)
T ss_dssp SEEEETTSEEEEEEECSS----SCEEEEETTSSC-------------------------E---EEECTTBCEEEEEECCS
T ss_pred EEEEeCCCeEEEEEecCC----ceEEEEECCCCe-------------------------E---EEecCCceeEEEEEeCC
Confidence 467899999999999853 456554432111 1 23456777789999999
Q ss_pred ceeEEEEeec-ccccccccEEEEEEe
Q 008422 523 PGVWFMHCHL-DVHLPWGLATAFVVE 547 (566)
Q Consensus 523 pG~w~~HCHi-l~H~~~GM~~~~~V~ 547 (566)
||.|.+.|.. --+-+.+|...+.|+
T Consensus 142 pG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 142 PGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp CEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred CEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 9999999995 446678999999886
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=90.00 E-value=1 Score=38.05 Aligned_cols=95 Identities=11% Similarity=0.168 Sum_probs=59.9
Q ss_pred eEEEc-cCCCEEEEEEEeCCccC--CCCCceeeeCCcEEEEEeCCCCCCcc-----cccccccCCCC----CcceeEEeC
Q 008422 442 SVKPL-KFNSTVEMILQNTALVV--LENHPMHVHGFDFHVLAQGFGNFDAA-----RDRQKFNLVNP----QRRNTIAVP 509 (566)
Q Consensus 442 ~~~~~-~~g~~v~~v~~n~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~n~~~p----~~rDTv~vp 509 (566)
..+.+ +.|++|.+++.|.+... .+.|-| .+...+ .++.. .....-++..+ ....|..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~-------vi~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 88 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNL-------VISKEA--DMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIG 88 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCC-------EEEEGG--GHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceE-------EEcccc--chhhHHHHHhhccccccccccccchhheeeeeeC
Confidence 45788 89999999999976411 123544 333221 00000 00000011111 123455789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeecccccccccEEEEEE
Q 008422 510 VGGWAVIRFRAN--NPGV-WFMHCHLDVHLPWGLATAFVV 546 (566)
Q Consensus 510 ~~g~~virf~ad--npG~-w~~HCHil~H~~~GM~~~~~V 546 (566)
||+...+.|.+. .||. |-|.|-+--|.. ||-+.+.|
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 89 AGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp TTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 999999999987 7876 999999999998 89999887
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=88.76 E-value=2 Score=35.96 Aligned_cols=94 Identities=9% Similarity=0.175 Sum_probs=59.0
Q ss_pred eEEEccC-CCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcc-----cccccccCC----CCCcceeEEeCCC
Q 008422 442 SVKPLKF-NSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAA-----RDRQKFNLV----NPQRRNTIAVPVG 511 (566)
Q Consensus 442 ~~~~~~~-g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~n~~----~p~~rDTv~vp~~ 511 (566)
..+.++. |++|.++|.|.+.++ --.=||.|.+...+ ..... .....-++. ....-.|..|.||
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p-----~~~M~Hn~Vl~~~~--~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pG 90 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLP-----KNVMGHNWVLSTAA--DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSG 90 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCC-----HHHHCBCCEEEEHH--HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTT
T ss_pred CEEEEecCCCEEEEEEEECCccc-----ccccCceEEEcccc--hHHHHHHHHHhcChhhccCCCCCccceeccceeCCC
Confidence 5578876 999999999986421 11113454444321 01000 000011121 2245567789999
Q ss_pred cEEEEEEEec---CceeEEEEeecccccccccEEEEEE
Q 008422 512 GWAVIRFRAN---NPGVWFMHCHLDVHLPWGLATAFVV 546 (566)
Q Consensus 512 g~~virf~ad---npG~w~~HCHil~H~~~GM~~~~~V 546 (566)
....|-|.+. .+|.|-|-|- -|. ||-+.+.|
T Consensus 91 es~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 91 EKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp CEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred cEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 9999999987 7999999999 898 99999987
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=87.48 E-value=3.6 Score=34.14 Aligned_cols=76 Identities=13% Similarity=0.144 Sum_probs=52.5
Q ss_pred CCcEE--EEEEEecccCceEEEEEc-CCeEEEEEe--cCCCcC--------cEEeeEEEECCCceEEEEEeeCC--CCce
Q 008422 215 TGKTY--LLRIINAALNNQLFFKIA-NHNFTVVAI--DACYTE--------PYVTDVVVIAPGQTTDVLLKADQ--PVGS 279 (566)
Q Consensus 215 ~G~~~--rlRliN~~~~~~~~~~l~-gh~~~via~--DG~~~~--------p~~~d~~~l~pgeR~dv~v~~~~--~~G~ 279 (566)
.|+.+ .|.+.|.+.. ...+.+. |+.+.++-. +|..+- ........|.|||...+-.+.++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~-~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSER-AIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSS-CEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCC-cEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 45444 5778898854 4446665 666555544 475441 23568999999999999999884 6899
Q ss_pred eEEEeeecccCC
Q 008422 280 YYMAARAYASAP 291 (566)
Q Consensus 280 y~~~~~~~~~~~ 291 (566)
|.+.+.......
T Consensus 95 Ytl~a~l~~~~~ 106 (120)
T 3isy_A 95 YEVKVTFKGRAE 106 (120)
T ss_dssp EEEEEEECCEET
T ss_pred EEEEEEEEeeec
Confidence 999887655443
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=66.78 E-value=12 Score=34.16 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=45.2
Q ss_pred EEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEeeeccc
Q 008422 210 TLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAS 289 (566)
Q Consensus 210 ~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~~~~~ 289 (566)
.+.+..|+.+||+|.+.. -.+.|.|...... +...||..-.+.+.++ .+|.|..+|.-+..
T Consensus 42 ~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK----------------~daiPGr~n~l~~~~~-~pG~y~g~CsE~CG 102 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQ----------------IYAMAGMQTRLHLIAN-EPGTYDGICAEICG 102 (205)
T ss_dssp EEEEETTSCEEEEEEESS--SCEEEEEGGGTEE----------------EEECTTCCEEEEECCS-SSEEEEEEECSCCS
T ss_pred eEEEeCCCEEEEEEecCC--ceeeEEecccCcE----------------EEecCCceEEEEEEeC-CCeEEEEEcccccc
Confidence 688999999999998764 3455666644333 3355788888888888 78999999986543
No 141
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=65.55 E-value=56 Score=26.88 Aligned_cols=74 Identities=12% Similarity=0.221 Sum_probs=46.0
Q ss_pred EEEEECCCCCCCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCC---CCCCcCCCCCeeEEEEEeC--CC
Q 008422 45 TITAVNGSLPGPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSM---ITQCPITPGNSYTYKFRIV--NQ 119 (566)
Q Consensus 45 ~~~~~NG~~pGP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~---vtq~~i~PG~~~~Y~f~~~--~~ 119 (566)
.+...|-+--.=+|+..-|++..+.|.+...+ ..| .|+||-.. .....|+||++.+|+...+ ..
T Consensus 23 ~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~ 91 (120)
T 3isy_A 23 NMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPE 91 (120)
T ss_dssp EEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCC
T ss_pred EEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCCCC
Confidence 33334433322477777777777777775321 111 34566432 2345699999999999996 25
Q ss_pred CcceeEeecc
Q 008422 120 EGTLWWHAHF 129 (566)
Q Consensus 120 ~Gt~wYH~H~ 129 (566)
+|+|..+.=.
T Consensus 92 pG~Ytl~a~l 101 (120)
T 3isy_A 92 PGTYEVKVTF 101 (120)
T ss_dssp SEEEEEEEEE
T ss_pred CccEEEEEEE
Confidence 8999877544
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=65.33 E-value=19 Score=32.80 Aligned_cols=73 Identities=10% Similarity=-0.091 Sum_probs=51.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecch-hhcc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFS-MLRA 134 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~~~~ 134 (566)
..|.+..|+.|++.+++. +.-++...-.+... .-+-||..-...|.+ +++|+|+..|..- |...
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lgvK-------------~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLGSQ-------------IYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGTEE-------------EEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccCcE-------------EEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 479999999999999996 33333333322211 224578888888987 9999999999753 3332
Q ss_pred -cceeEEEEe
Q 008422 135 -TVHGALIIR 143 (566)
Q Consensus 135 -Gl~G~liV~ 143 (566)
.|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 677888887
No 143
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=61.16 E-value=16 Score=36.17 Aligned_cols=16 Identities=19% Similarity=0.233 Sum_probs=13.7
Q ss_pred CcCCCCCeeEEEEEeC
Q 008422 102 CPITPGNSYTYKFRIV 117 (566)
Q Consensus 102 ~~i~PG~~~~Y~f~~~ 117 (566)
..|+||++.+.+|.+.
T Consensus 95 ~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVS 110 (343)
T ss_dssp EEECTTCEEEEEEECT
T ss_pred EEeCCCCeEEEEEehh
Confidence 3589999999999983
No 144
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=53.05 E-value=35 Score=27.84 Aligned_cols=47 Identities=15% Similarity=0.359 Sum_probs=31.8
Q ss_pred cEEEEEEEecccCc-eEEEEEcCC-eEEEEEecCCCcCcEEeeEEEECCCceEEEEEee
Q 008422 217 KTYLLRIINAALNN-QLFFKIANH-NFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKA 273 (566)
Q Consensus 217 ~~~rlRliN~~~~~-~~~~~l~gh-~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~ 273 (566)
-.|+|+|+|.+... .+.|.+.|. .+.++ | + ..+.|.||+..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 35999999999665 567777663 23332 2 1 14999999977765544
No 145
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=48.99 E-value=19 Score=30.13 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=26.2
Q ss_pred EEEEEeCCCCce---eEEEeCcccc-----CCCCCCCCCCCCCCcCCCCCeeEEEEE
Q 008422 67 IVHVFNKSPYNL---TIHWHGIFQL-----LSAWADGPSMITQCPITPGNSYTYKFR 115 (566)
Q Consensus 67 ~v~v~N~l~~~~---~iH~HG~~~~-----~~~~~DG~~~vtq~~i~PG~~~~Y~f~ 115 (566)
+|++.|....+. +-||.=.... ... +||-| .|.-|.||++|+|.=-
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G--~GVVG-~qP~L~PGe~f~YtSg 87 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDG--EGVVG-EQPWLRPGEAFHYTSG 87 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEE--SSBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEEC--CCeec-CCCcCCCCCceEEeCC
Confidence 366677765543 4566533221 111 56544 2566899998887543
No 146
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=48.60 E-value=50 Score=31.28 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=51.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc-hhhcc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF-SMLRA 134 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~~~~ 134 (566)
..|.+..|+.|++.+++. +.-++...-.+..+ +| +-||..-...|++ +++|+|...|.. .|...
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~k----~d---------a~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGVK----QD---------AVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTEE----EE---------ECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCce----EE---------ecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 469999999999999987 33334333333221 12 4568888888987 999999999874 33332
Q ss_pred -cceeEEEEeCC
Q 008422 135 -TVHGALIIRPR 145 (566)
Q Consensus 135 -Gl~G~liV~~~ 145 (566)
.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 57677776654
No 147
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=46.82 E-value=20 Score=30.44 Aligned_cols=48 Identities=19% Similarity=0.190 Sum_probs=25.9
Q ss_pred EEEEEeCCCCce---eEEEeCccccCCC---CCCCCCCCCCCcCCCCCeeEEEEE
Q 008422 67 IVHVFNKSPYNL---TIHWHGIFQLLSA---WADGPSMITQCPITPGNSYTYKFR 115 (566)
Q Consensus 67 ~v~v~N~l~~~~---~iH~HG~~~~~~~---~~DG~~~vtq~~i~PG~~~~Y~f~ 115 (566)
+|++.|....+. +-||.=....+.- .-+||-| .|.-|.||++|+|.=-
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~YtSg 91 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYTSG 91 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEcCC
Confidence 366677765443 4566533221110 0155544 3566899998887543
No 148
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=46.69 E-value=59 Score=31.40 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=51.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecc-hhhcc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHF-SMLRA 134 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~-~~~~~ 134 (566)
..|.+..|+.|++.+++.. .-++...-.+..+ +| +-||..-+..|.+ +++|+|...|.. .|...
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP~lg~k----~d---------aiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIPAFAVK----QD---------AVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEGGGTEE----EE---------ECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEcccCce----EE---------ecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999963 3333333332221 12 4578888888987 999999999974 33333
Q ss_pred -cceeEEEEeCCC
Q 008422 135 -TVHGALIIRPRS 146 (566)
Q Consensus 135 -Gl~G~liV~~~~ 146 (566)
.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 677777776543
No 149
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=46.68 E-value=18 Score=30.13 Aligned_cols=46 Identities=22% Similarity=0.264 Sum_probs=25.9
Q ss_pred EEEEEeCCCCce---eEEEeCcccc-----CCCCCCCCCCCCCCcCCCCCeeEEEEE
Q 008422 67 IVHVFNKSPYNL---TIHWHGIFQL-----LSAWADGPSMITQCPITPGNSYTYKFR 115 (566)
Q Consensus 67 ~v~v~N~l~~~~---~iH~HG~~~~-----~~~~~DG~~~vtq~~i~PG~~~~Y~f~ 115 (566)
+|++.|....+. +-||.=.... ... +||-| .|.-|.||++|+|.=-
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G--~GVVG-~qP~L~PGe~f~YtSg 86 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEG--DGVVG-EQPRIKANDEYTYSSG 86 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEE--ESBTT-BCCEECTTCEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEEC--CceEc-CCCcCCCCCceEEeCC
Confidence 366677765443 4566533211 111 55544 2566899998887543
No 150
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=43.60 E-value=18 Score=30.52 Aligned_cols=46 Identities=20% Similarity=0.257 Sum_probs=25.6
Q ss_pred EEEEEeCCCCce---eEEEeCccc-----cCCCCCCCCCCCCCCcCCCCCeeEEEEE
Q 008422 67 IVHVFNKSPYNL---TIHWHGIFQ-----LLSAWADGPSMITQCPITPGNSYTYKFR 115 (566)
Q Consensus 67 ~v~v~N~l~~~~---~iH~HG~~~-----~~~~~~DG~~~vtq~~i~PG~~~~Y~f~ 115 (566)
+|++.|....+. +-||.=... .... +||-| .|.-|.||++|+|.=-
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G--~GVVG-eqP~L~PGe~F~YtSg 86 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQG--AGVVG-ETPTIPPNTAYQYTSG 86 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEE--ESBTT-BCCEECTTEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEc--CceEc-CCCcCCCCCceEEcCC
Confidence 366677765443 446653221 1111 55544 2566899998887543
No 151
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=43.17 E-value=90 Score=30.07 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=53.0
Q ss_pred ceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEe
Q 008422 441 TSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRA 520 (566)
Q Consensus 441 ~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a 520 (566)
.+.+.++.|+.|++.+.+.+ ..|-|.+=.... .. .+-||....+.|.+
T Consensus 188 dN~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~-------------------------k~---daiPG~~n~~~~~~ 235 (298)
T 3hb3_B 188 DNPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV-------------------------KQ---DAVPGRIAQLWFSV 235 (298)
T ss_dssp SSCEEEESSSEEEEEEEESS----SCEEEEEGGGTE-------------------------EE---EECTTCCEEEEEEC
T ss_pred cceEEEEcCCEEEEEEEeCC----ccceeeEcccCc-------------------------eE---EecCCceEEEEEEe
Confidence 46688999999999999854 456555432211 12 23356667789999
Q ss_pred cCceeEEEEeeccc-ccccccEEEEEEec
Q 008422 521 NNPGVWFMHCHLDV-HLPWGLATAFVVEN 548 (566)
Q Consensus 521 dnpG~w~~HCHil~-H~~~GM~~~~~V~~ 548 (566)
+.||.|...|.-.- .-+..|-..++|.+
T Consensus 236 ~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 236 DQEGVYFGQCSELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp SSSEEEEECCCSCCSTTTTSCCEEEEEEC
T ss_pred CCCEEEEEEcccccCcCccCCeeEEEEEc
Confidence 99999999998654 34566777777653
No 152
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=36.27 E-value=1.3e+02 Score=28.23 Aligned_cols=76 Identities=20% Similarity=0.282 Sum_probs=51.5
Q ss_pred ceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEe
Q 008422 441 TSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRA 520 (566)
Q Consensus 441 ~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a 520 (566)
.+.+.++.|+.|++.+.+.+ ..|-|-+=.... ..| +-||....+.|.+
T Consensus 170 dn~l~lP~g~~v~~~~tS~D----ViHsf~ip~l~~-------------------------k~d---a~PG~~n~~~~~~ 217 (262)
T 2gsm_B 170 DTAMVVPVNKTVVVQVTGAD----VIHSWTVPAFGV-------------------------KQD---AVPGRLAQLWFRA 217 (262)
T ss_dssp SSCEEEETTSEEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECBTCCEEEEEEC
T ss_pred cceEEEecCCEEEEEEEECc----ccceeeecccCc-------------------------eEE---ecCCceeEEEEec
Confidence 35688999999999999754 455544432211 122 2356666788999
Q ss_pred cCceeEEEEeeccccc-ccccEEEEEEec
Q 008422 521 NNPGVWFMHCHLDVHL-PWGLATAFVVEN 548 (566)
Q Consensus 521 dnpG~w~~HCHil~H~-~~GM~~~~~V~~ 548 (566)
+.||.|...|--.--. +..|-..++|.+
T Consensus 218 ~~~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 218 EREGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp CSCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CCcEEEEEEChHhcccCcccCeEEEEEEc
Confidence 9999999999866544 455666666643
No 153
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=35.91 E-value=39 Score=26.91 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=34.4
Q ss_pred EEEEEEEeCCCCce---eEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeC-CCCcce
Q 008422 65 TLIVHVFNKSPYNL---TIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIV-NQEGTL 123 (566)
Q Consensus 65 ~v~v~v~N~l~~~~---~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~-~~~Gt~ 123 (566)
.++|.|+|-|+.+. .++..|.-.. .+ --+....|.||++..+++... ..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 67889999998654 4677664321 11 011113599999999999874 556653
No 154
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=35.38 E-value=82 Score=29.06 Aligned_cols=75 Identities=11% Similarity=-0.023 Sum_probs=49.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCCCCCCCCcCCCCCeeEEEEEeCCCCcceeEeecch-hhcc
Q 008422 56 PTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGPSMITQCPITPGNSYTYKFRIVNQEGTLWWHAHFS-MLRA 134 (566)
Q Consensus 56 P~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt~wYH~H~~-~~~~ 134 (566)
..+.+..|..|++.++.. +.-++...-.+..+ +|. -||..-...|++ +++|+|+..|..- |...
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~K----~Da---------iPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGLK----TDA---------IPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTEE----EEE---------CTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCcE----EEe---------cCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 679999999999999986 33444433333222 243 457777778887 9999999998642 3322
Q ss_pred -cceeEEEEeCC
Q 008422 135 -TVHGALIIRPR 145 (566)
Q Consensus 135 -Gl~G~liV~~~ 145 (566)
-|-+.+.|.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 45566665543
No 155
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=34.46 E-value=1.7e+02 Score=23.65 Aligned_cols=63 Identities=14% Similarity=0.178 Sum_probs=38.1
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeEEEeC-----------ccccCCCCC-CCCCCCCCCcCCCCCeeEEEEEeCCCCcc
Q 008422 55 GPTIRVHEGDTLIVHVFNKSPYNLTIHWHG-----------IFQLLSAWA-DGPSMITQCPITPGNSYTYKFRIVNQEGT 122 (566)
Q Consensus 55 GP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG-----------~~~~~~~~~-DG~~~vtq~~i~PG~~~~Y~f~~~~~~Gt 122 (566)
|-+|.++.||++.|.|.-+-....+-.... +.+... +. |..+ .-.+..|++..+.|++ .++|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~-y~~~~~~---~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCK-YTPTPSS---TPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEE-EECCCCS---SSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEe-EEeCCCC---CCCcCCCceEEEEEEE-eCCce
Confidence 468999999999999997654444444442 111000 00 1110 1135668889999998 77886
No 156
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=34.32 E-value=69 Score=26.55 Aligned_cols=63 Identities=24% Similarity=0.352 Sum_probs=34.9
Q ss_pred CCeEEEecCCEEEEEEE---eCCCCcee--EEE--eCcccc-CCCCCCCCCCCCCCcCCCCCeeEEEEEeC
Q 008422 55 GPTIRVHEGDTLIVHVF---NKSPYNLT--IHW--HGIFQL-LSAWADGPSMITQCPITPGNSYTYKFRIV 117 (566)
Q Consensus 55 GP~i~~~~Gd~v~v~v~---N~l~~~~~--iH~--HG~~~~-~~~~~DG~~~vtq~~i~PG~~~~Y~f~~~ 117 (566)
.+.=.+++|..+.+.+. |....... +|+ .|+..+ .....|+=..-..|||.+|+.++|.+.++
T Consensus 25 ~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 25 TQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 35556788887777766 22222222 322 333332 11112443222469999999999998874
No 157
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=34.31 E-value=68 Score=26.38 Aligned_cols=59 Identities=19% Similarity=0.221 Sum_probs=36.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCcee--EEEeCccccCCCCCC-----C----CCCCCCCcCCCCCeeEEEEE
Q 008422 57 TIRVHEG-DTLIVHVFNKSPYNLT--IHWHGIFQLLSAWAD-----G----PSMITQCPITPGNSYTYKFR 115 (566)
Q Consensus 57 ~i~~~~G-d~v~v~v~N~l~~~~~--iH~HG~~~~~~~~~D-----G----~~~vtq~~i~PG~~~~Y~f~ 115 (566)
.|++++| ++++|+|.|..++|.- -|+|=.+....---| | .|.-|-.-..||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5778888 6899999999988765 477755543322112 1 22223345678887776653
No 158
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=34.31 E-value=68 Score=26.38 Aligned_cols=59 Identities=19% Similarity=0.221 Sum_probs=36.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCcee--EEEeCccccCCCCCC-----C----CCCCCCCcCCCCCeeEEEEE
Q 008422 57 TIRVHEG-DTLIVHVFNKSPYNLT--IHWHGIFQLLSAWAD-----G----PSMITQCPITPGNSYTYKFR 115 (566)
Q Consensus 57 ~i~~~~G-d~v~v~v~N~l~~~~~--iH~HG~~~~~~~~~D-----G----~~~vtq~~i~PG~~~~Y~f~ 115 (566)
.|++++| ++++|+|.|..++|.- -|+|=.+....---| | .|.-|-.-..||++.+.+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5778888 6899999999988765 477755543322112 1 22223345678887776653
No 159
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=32.43 E-value=1.1e+02 Score=25.19 Aligned_cols=61 Identities=15% Similarity=0.329 Sum_probs=34.4
Q ss_pred CCeEEEecCCEEEEEEEe---CCCC--ceeEEE--eCccccCC-CCCCCCCCCCCCcCCCCCeeEEEEEe
Q 008422 55 GPTIRVHEGDTLIVHVFN---KSPY--NLTIHW--HGIFQLLS-AWADGPSMITQCPITPGNSYTYKFRI 116 (566)
Q Consensus 55 GP~i~~~~Gd~v~v~v~N---~l~~--~~~iH~--HG~~~~~~-~~~DG~~~vtq~~i~PG~~~~Y~f~~ 116 (566)
.+.=.+++|..+.+.+.= .... .+.+|+ .|+..+-. .-.|+=.+ ..|||.+|+.++|.+..
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 345567888887777762 2111 222332 34433211 11243222 56999999999999776
No 160
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=29.14 E-value=2.1e+02 Score=23.26 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=20.8
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeEEEeC
Q 008422 55 GPTIRVHEGDTLIVHVFNKSPYNLTIHWHG 84 (566)
Q Consensus 55 GP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG 84 (566)
|-+|.++.||++.|.|.=+-....+-...+
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~ 41 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSG 41 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEec
Confidence 457999999999999986544444443333
No 161
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=29.00 E-value=2.1e+02 Score=23.71 Aligned_cols=65 Identities=12% Similarity=0.192 Sum_probs=36.7
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeEEEeCccccCCCCCCCC--------CCCCCCcCCCCCeeEEEEEeCCCCcce
Q 008422 55 GPTIRVHEGDTLIVHVFNKSPYNLTIHWHGIFQLLSAWADGP--------SMITQCPITPGNSYTYKFRIVNQEGTL 123 (566)
Q Consensus 55 GP~i~~~~Gd~v~v~v~N~l~~~~~iH~HG~~~~~~~~~DG~--------~~vtq~~i~PG~~~~Y~f~~~~~~Gt~ 123 (566)
|-+|.++.||++.|.|.-+-....+-...... +..-.|++ |. ....+..|++..+.|++ .++|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~--~~~L~~~~~~v~~~y~p~-~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGT--KESPNESMFTVENKYFPP-DSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTB--SSCSCTTTEEEEEEEECC-TTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCC--CccccccceeecceeeeC-CCCCcCCCcEEEEEEEE-ccCceE
Confidence 56999999999999998654333332222211 00001221 10 01135667888888887 777753
No 162
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=25.14 E-value=46 Score=32.44 Aligned_cols=57 Identities=14% Similarity=0.282 Sum_probs=0.0
Q ss_pred EEEEECCcEEEEEEEecccCceEEEEEcCCeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCCCCceeEEEee
Q 008422 210 TLKVETGKTYLLRIINAALNNQLFFKIANHNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAAR 285 (566)
Q Consensus 210 ~~~v~~G~~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~~~G~y~~~~~ 285 (566)
.+.+..|+++||++...... |.|+| |.-.-.+..-||..-.+.+.++ .+|.|...|.
T Consensus 152 ~l~lP~g~~V~~~lTS~DVi---------Hsf~I---------P~lg~k~DaiPGr~n~~~~~~~-~~G~y~g~Cs 208 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVM---------NSFFI---------PRLGSQIYAMAGMQTRLHLIAN-EPGTYDGISA 208 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSC---------EEEEE---------GGGTEEEEECBTSCEEEEEECC-SCBCCEEBCC
T ss_pred eEEEeCCCEEEEEEEeCCcc---------ceeee---------cccCcEEeecCCcceeeEEecC-CCeEEEEecc
No 163
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=24.04 E-value=82 Score=25.63 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=28.0
Q ss_pred EEEecCceeEEEEeecccccccccEEEE-EEecC
Q 008422 517 RFRANNPGVWFMHCHLDVHLPWGLATAF-VVENG 549 (566)
Q Consensus 517 rf~adnpG~w~~HCHil~H~~~GM~~~~-~V~~~ 549 (566)
.|..+.+|..-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4556789999999999999999999999 88653
No 164
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=23.83 E-value=42 Score=27.88 Aligned_cols=49 Identities=16% Similarity=0.205 Sum_probs=30.5
Q ss_pred EEEEEEEecccCceEEEEEcCCeEEEEEecCCCcC----cEEeeEEEECCCceEEE
Q 008422 218 TYLLRIINAALNNQLFFKIANHNFTVVAIDACYTE----PYVTDVVVIAPGQTTDV 269 (566)
Q Consensus 218 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~~~l~pgeR~dv 269 (566)
.|++||.|.|... +.|-...+.+...||...+ .+....=.|.|||.++-
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 83 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTY 83 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEE
Confidence 4789999998643 4555566766666664321 12224457888886665
No 165
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=23.71 E-value=1.5e+02 Score=29.50 Aligned_cols=50 Identities=26% Similarity=0.229 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCcee---EEEeCccccCCCC-------------CCCCCCCCCCcCCCCCeeEEEEEe
Q 008422 65 TLIVHVFNKSPYNLT---IHWHGIFQLLSAW-------------ADGPSMITQCPITPGNSYTYKFRI 116 (566)
Q Consensus 65 ~v~v~v~N~l~~~~~---iH~HG~~~~~~~~-------------~DG~~~vtq~~i~PG~~~~Y~f~~ 116 (566)
++.++|+|+.+.+.. .-.-|++...... .+|.. -.. ||+|||+.+.+.++
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a 366 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKI 366 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEE
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEe
No 166
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=23.00 E-value=2.6e+02 Score=21.48 Aligned_cols=69 Identities=12% Similarity=0.066 Sum_probs=38.3
Q ss_pred EEECCcEEEEEEEecccCceEEEEEcC--CeEEEEEecCCCcCcEEeeEEEECCCceEEEEEeeCC--CCceeEEEeee
Q 008422 212 KVETGKTYLLRIINAALNNQLFFKIAN--HNFTVVAIDACYTEPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARA 286 (566)
Q Consensus 212 ~v~~G~~~rlRliN~~~~~~~~~~l~g--h~~~via~DG~~~~p~~~d~~~l~pgeR~dv~v~~~~--~~G~y~~~~~~ 286 (566)
--+|||++++|++-....... ..+ -.+++...+|..+. .-.........++..+..++ ..|.|.+++..
T Consensus 12 iYrPGetV~~~~~~~~~~~~p---~~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFHP---LNELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGGCB---CCCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCCcC---CCCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 357899999998755322111 011 13455555555321 11222234456677777654 45999998775
No 167
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=22.66 E-value=60 Score=26.97 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=29.5
Q ss_pred EEEEEEEecccCceEEEEEcCCeEEEEEecCCCc----CcEEeeEEEECCCceEEE
Q 008422 218 TYLLRIINAALNNQLFFKIANHNFTVVAIDACYT----EPYVTDVVVIAPGQTTDV 269 (566)
Q Consensus 218 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~----~p~~~d~~~l~pgeR~dv 269 (566)
.|++||-|.|... +.|-...|.+...||... +.+....=.|.|||.++-
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 4789999998543 355555666666665432 112224456888886655
No 168
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=22.38 E-value=2.2e+02 Score=26.14 Aligned_cols=75 Identities=12% Similarity=0.200 Sum_probs=50.1
Q ss_pred ceEEEccCCCEEEEEEEeCCccCCCCCceeeeCCcEEEEEeCCCCCCcccccccccCCCCCcceeEEeCCCcEEEEEEEe
Q 008422 441 TSVKPLKFNSTVEMILQNTALVVLENHPMHVHGFDFHVLAQGFGNFDAARDRQKFNLVNPQRRNTIAVPVGGWAVIRFRA 520 (566)
Q Consensus 441 ~~~~~~~~g~~v~~v~~n~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~n~~~p~~rDTv~vp~~g~~virf~a 520 (566)
.+.+.++.|+.|++.+.+.+ ..|.|-+=..-. ..| .-||-.-.+.|++
T Consensus 139 dn~lvlP~~~~Vr~~vtS~D----ViHsf~vP~lg~-------------------------K~D---aiPGr~n~~~~~~ 186 (227)
T 1v54_B 139 DNRVVLPMEMTIRMLVSSED----VLHSWAVPSLGL-------------------------KTD---AIPGRLNQTTLMS 186 (227)
T ss_dssp SSCEEEETTSCEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECTTCCEEEEECC
T ss_pred CceEEEecCCEEEEEEEeCc----ccceeeecccCc-------------------------EEE---ecCCceEEEEEec
Confidence 46688999999999999753 455544432211 123 2345666688999
Q ss_pred cCceeEEEEeecccccc-cccEEEEEEe
Q 008422 521 NNPGVWFMHCHLDVHLP-WGLATAFVVE 547 (566)
Q Consensus 521 dnpG~w~~HCHil~H~~-~GM~~~~~V~ 547 (566)
+.||.+...|.-.-... .-|-..++|.
T Consensus 187 ~~~G~y~g~Cse~CG~~Hs~M~~~v~vv 214 (227)
T 1v54_B 187 SRPGLYYGQCSEICGSNHSFMPIVLELV 214 (227)
T ss_dssp SSCEEEEECCCSCCSTTGGGCCEEEEEE
T ss_pred CCcEEEEEEehhhcccccccCeEEEEEE
Confidence 99999999998766443 4455556554
No 169
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=21.66 E-value=46 Score=27.98 Aligned_cols=49 Identities=18% Similarity=0.306 Sum_probs=30.4
Q ss_pred EEEEEEEecccCceEEEEEcCCeEEEEEecCCCcC----cEEeeEEEECCCceEEE
Q 008422 218 TYLLRIINAALNNQLFFKIANHNFTVVAIDACYTE----PYVTDVVVIAPGQTTDV 269 (566)
Q Consensus 218 ~~rlRliN~~~~~~~~~~l~gh~~~via~DG~~~~----p~~~d~~~l~pgeR~dv 269 (566)
.|++||-|.|... +.|-...|.+...||...+ .+....=.|.|||.+.-
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Y 83 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQY 83 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEE
Confidence 4789999998643 4555566666666664321 12224457888886665
No 170
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=21.40 E-value=1.4e+02 Score=27.66 Aligned_cols=19 Identities=26% Similarity=0.616 Sum_probs=14.7
Q ss_pred eeEEEECCCceEEEEEeeCCCCcee
Q 008422 256 TDVVVIAPGQTTDVLLKADQPVGSY 280 (566)
Q Consensus 256 ~d~~~l~pgeR~dv~v~~~~~~G~y 280 (566)
...|.|.|||++.+ .||.|
T Consensus 171 G~~i~L~PGESiTl------~Pg~~ 189 (246)
T 3kmh_A 171 GSQLRLSPGESICL------PPGLY 189 (246)
T ss_dssp TCEEEECTTCEEEE------CTTEE
T ss_pred CCEEEECCCCeEec------CCCCE
Confidence 47889999998875 46766
No 171
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=20.73 E-value=1.5e+02 Score=29.29 Aligned_cols=52 Identities=13% Similarity=0.236 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCcee---EEEeCccc-------cCCCCCC------CCCCCCCCcCCCCCeeEEEEEe
Q 008422 65 TLIVHVFNKSPYNLT---IHWHGIFQ-------LLSAWAD------GPSMITQCPITPGNSYTYKFRI 116 (566)
Q Consensus 65 ~v~v~v~N~l~~~~~---iH~HG~~~-------~~~~~~D------G~~~vtq~~i~PG~~~~Y~f~~ 116 (566)
++.++|+|..+.+.. .-.-|++. ....+-| |..--...||+|||+.+.+.++
T Consensus 267 ~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a 334 (382)
T 1yew_A 267 RMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTA 334 (382)
T ss_dssp EEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEE
T ss_pred EEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEe
No 172
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=20.37 E-value=43 Score=27.91 Aligned_cols=22 Identities=18% Similarity=0.293 Sum_probs=0.0
Q ss_pred EEEECCcEEEEEEEecccCceE
Q 008422 211 LKVETGKTYLLRIINAALNNQL 232 (566)
Q Consensus 211 ~~v~~G~~~rlRliN~~~~~~~ 232 (566)
++|+.||+|||.+.|-+....+
T Consensus 73 InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 73 VNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEETTCEEEEEETTEEEEEEE
T ss_pred EEecCCCEEEEEeCCcEEEEEE
Done!