BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008423
(566 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80585|MTHR2_ARATH Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana
GN=MTHFR2 PE=1 SV=2
Length = 594
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/542 (83%), Positives = 497/542 (91%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
WGAGGSTADLTLDIA+RMQN +CVE+MMHLTCTNMPVEKIDHAL+TI+SNGIQNVLALRG
Sbjct: 53 WGAGGSTADLTLDIASRMQNVVCVESMMHLTCTNMPVEKIDHALETIRSNGIQNVLALRG 112
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
DPPHGQDKFVQ++GGF CALDLV HIRS YGDYFGITVAGYPE HPD IG +G+ASNE+Y
Sbjct: 113 DPPHGQDKFVQVEGGFDCALDLVNHIRSKYGDYFGITVAGYPEAHPDVIGENGLASNEAY 172
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
QSDL YLKKK+DAGADLI+TQLFYDTD+FLKFVNDCRQIGI+CPIVPGIMPINNY+GFLR
Sbjct: 173 QSDLEYLKKKIDAGADLIVTQLFYDTDIFLKFVNDCRQIGISCPIVPGIMPINNYRGFLR 232
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
MTGFCKTKIP E+ AALEPIKDNEEAVKAYGIHLG EMCKK+LAHG+K+LHLYTLNMEKS
Sbjct: 233 MTGFCKTKIPVEVMAALEPIKDNEEAVKAYGIHLGTEMCKKMLAHGVKSLHLYTLNMEKS 292
Query: 265 ALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRG 324
ALAIL+NLG+I+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P+G
Sbjct: 293 ALAILMNLGMIDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWEDFPQG 352
Query: 325 RWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWS 384
RWGDSR+ SYGALSDHQF RPR+RDKKL +EW VPLKSVEDI EKFK CLG L+SSPWS
Sbjct: 353 RWGDSRSASYGALSDHQFSRPRARDKKLQQEWVVPLKSVEDIQEKFKELCLGNLKSSPWS 412
Query: 385 ELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEF 444
ELDGLQPET+IINEQL K+N KGFLTINSQP+VN ERSDS +VGWGGP GYVYQKAYLEF
Sbjct: 413 ELDGLQPETRIINEQLIKVNSKGFLTINSQPSVNAERSDSPTVGWGGPVGYVYQKAYLEF 472
Query: 445 FCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVD 504
FCS EKL A+V+K KALP IT+MAVNK W +N Q DVNAVTWGVFPAKEIIQPT+VD
Sbjct: 473 FCSKEKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAKEIIQPTIVD 532
Query: 505 PASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFAVFA 564
PASF VWKDEAFE WSRSWA+LYPE D SR LLEEV++SYYLVSLV+NDYINGD+FAVFA
Sbjct: 533 PASFNVWKDEAFETWSRSWANLYPEADPSRNLLEEVKNSYYLVSLVENDYINGDIFAVFA 592
Query: 565 DL 566
DL
Sbjct: 593 DL 594
>sp|Q75HE6|MTHR_ORYSJ Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp.
japonica GN=Os03g0815200 PE=2 SV=1
Length = 594
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/542 (83%), Positives = 493/542 (90%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
WGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKID AL TIKSNGIQNVLALRG
Sbjct: 53 WGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDDALTTIKSNGIQNVLALRG 112
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
DPPHGQDKFVQ+ GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I A+ E+Y
Sbjct: 113 DPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQSTEGATPEAY 172
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
+DL YLK+KVDAGADLIITQLFYDTD+FLKFVNDCRQIGITCPIVPGIMPINNYKGFLR
Sbjct: 173 SNDLAYLKQKVDAGADLIITQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 232
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLG EMCKKILA GIKTLHLYTLNMEKS
Sbjct: 233 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGTEMCKKILATGIKTLHLYTLNMEKS 292
Query: 265 ALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRG 324
AL IL+NLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSY+SRT+GWDQYP G
Sbjct: 293 ALGILMNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYISRTLGWDQYPHG 352
Query: 325 RWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWS 384
RWGDSRNPSYGAL+D+QF RPR R KKL EEWAVP+KSVEDI E+F N+C GKL SSPWS
Sbjct: 353 RWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVPVKSVEDINERFMNFCQGKLTSSPWS 412
Query: 385 ELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEF 444
ELDGLQPETKII++QL KIN KGFLTINSQPAVNGERSDS+SVGWGGPGGYVYQKAYLEF
Sbjct: 413 ELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERSDSTSVGWGGPGGYVYQKAYLEF 472
Query: 445 FCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVD 504
FCS EKL L++KSKA P +T++AVNK+G +N+ VNAVTWGVFP KEI+QPTVVD
Sbjct: 473 FCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGKEIVQPTVVD 532
Query: 505 PASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFAVFA 564
ASF VWKDEAFEIWS+ WA L+PEGDSSR++L++VQ SY+LVSLVDNDYINGDLFA F
Sbjct: 533 SASFMVWKDEAFEIWSKGWACLFPEGDSSREILDKVQKSYFLVSLVDNDYINGDLFAAFK 592
Query: 565 DL 566
++
Sbjct: 593 EI 594
>sp|Q9SE60|MTHR1_ARATH Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana
GN=MTHFR1 PE=1 SV=1
Length = 592
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/540 (81%), Positives = 489/540 (90%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
WGAGGSTADLTL+IA+RMQN ICVETMMHLTCTNMP+EKIDHAL+TI+SNGIQNVLALRG
Sbjct: 53 WGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRG 112
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
DPPHGQDKFVQ++GGFACALDLV HIRS YGDYFGITVAGYPE HPD I DG+A+ ESY
Sbjct: 113 DPPHGQDKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESY 172
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
QSDL YLKKKVDAGADLI+TQLFYDTD+FLKFVNDCRQIGI CPIVPGIMPI+NYKGFLR
Sbjct: 173 QSDLAYLKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPIVPGIMPISNYKGFLR 232
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
M GFCKTKIPAE+TAALEPIKDN+EAVKAYGIH EMCKKILAHGI +LHLYTLN++KS
Sbjct: 233 MAGFCKTKIPAELTAALEPIKDNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDKS 292
Query: 265 ALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRG 324
A+ IL+NLGLI+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P G
Sbjct: 293 AIGILMNLGLIDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWNDFPHG 352
Query: 325 RWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWS 384
RWGDS + +Y LSD+QF RP+ RDKKL +EW VPLKS+ED+ EKFK C+G L+SSPWS
Sbjct: 353 RWGDSHSAAYSTLSDYQFARPKGRDKKLQQEWVVPLKSIEDVQEKFKELCIGNLKSSPWS 412
Query: 385 ELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEF 444
ELDGLQPETKIINEQLGKIN GFLTINSQP+VN +SDS ++GWGGPGGYVYQKAYLEF
Sbjct: 413 ELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGPGGYVYQKAYLEF 472
Query: 445 FCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVD 504
FCS +KL LV+KSKA P IT+MAVNK NW +N ++DVNAVTWGVFPAKE+IQPT+VD
Sbjct: 473 FCSKDKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAKEVIQPTIVD 532
Query: 505 PASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFAVFA 564
PASFKVWKDEAFEIWSRSWA+LYPE D SRKLLEEV++SYYLVSLVDN+YINGD+F+VFA
Sbjct: 533 PASFKVWKDEAFEIWSRSWANLYPEDDPSRKLLEEVKNSYYLVSLVDNNYINGDIFSVFA 592
>sp|Q9SE94|MTHR1_MAIZE Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1
Length = 593
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/539 (82%), Positives = 488/539 (90%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
WGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKIDHAL+TIKSNGIQNVLALRG
Sbjct: 53 WGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRG 112
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
DPPHGQDKFVQ++GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I +G A+ E+Y
Sbjct: 113 DPPHGQDKFVQVEGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAY 172
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
+DL YLK+KVDAGADLI+TQLFYDTD+FLKFVNDCRQIGITCPIVPGIMPINNYKGFLR
Sbjct: 173 SNDLAYLKRKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 232
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
MTGFCKTKIP+EITAAL+PIKDNEEAV+ YGIHLG EMCKKILA GIKTLHLYTLNM+KS
Sbjct: 233 MTGFCKTKIPSEITAALDPIKDNEEAVRQYGIHLGTEMCKKILATGIKTLHLYTLNMDKS 292
Query: 265 ALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRG 324
A+ IL+NLGLIEESK+SR LPWRP TNVFRVKEDVRPIFWANRPKSYL RT+GWDQYP G
Sbjct: 293 AIGILMNLGLIEESKVSRPLPWRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHG 352
Query: 325 RWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWS 384
RWGDSRNPSYGAL+DHQF RPR R KKL EEWAVPLKSVEDI E+F N+C GKL SSPWS
Sbjct: 353 RWGDSRNPSYGALTDHQFTRPRGRGKKLQEEWAVPLKSVEDISERFTNFCQGKLTSSPWS 412
Query: 385 ELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEF 444
ELDGLQPETKII++QL IN KGFLTINSQPAVNGE+SDS +VGWGGPGGYVYQKAYLEF
Sbjct: 413 ELDGLQPETKIIDDQLVNINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGYVYQKAYLEF 472
Query: 445 FCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVD 504
FC+ EKL L++K KA P +T++AVNK+G +N++ VNAVTWGVFP KEIIQPTVVD
Sbjct: 473 FCAKEKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGKEIIQPTVVD 532
Query: 505 PASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFAVF 563
ASF VWKDEAFEIW+R W ++PEGDSSR+LLE+VQ +YYLVSLVDNDY+ GDLFA F
Sbjct: 533 HASFMVWKDEAFEIWTRGWGCMFPEGDSSRELLEKVQKTYYLVSLVDNDYVQGDLFAAF 591
>sp|P42898|MTHR_HUMAN Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1
SV=3
Length = 656
Score = 469 bits (1207), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/550 (44%), Positives = 342/550 (62%), Gaps = 25/550 (4%)
Query: 28 GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87
G ++ IA+ N +ET++H+TC +E+I L K G++N++ALRGDP
Sbjct: 102 GSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPI 161
Query: 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147
D++ + +GGF A+DLVKHIRS +GDYF I VAGYP+GHP+ S+++D
Sbjct: 162 --GDQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEA---------GSFEAD 210
Query: 148 LLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG 207
L +LK+KV AGAD IITQLF++ D F +FV C +GITCPIVPGI PI Y ++
Sbjct: 211 LKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVK 270
Query: 208 FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSAL 266
K ++P EI +EPIKDN+ A++ YGI L +C+++LA G + LH YTLN E +
Sbjct: 271 LSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATT 330
Query: 267 AILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRW 326
+L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRW
Sbjct: 331 EVLKRLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRW 389
Query: 327 GDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------K 377
G+S +P++G L D+ +++ +S ++L + W L S E ++E F Y G K
Sbjct: 390 GNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHK 449
Query: 378 LRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVY 437
+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+
Sbjct: 450 VTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVF 508
Query: 438 QKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 496
QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +E
Sbjct: 509 QKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGRE 568
Query: 497 IIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY-I 555
IIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDND+ +
Sbjct: 569 IIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPL 628
Query: 556 NGDLFAVFAD 565
+ L+ V D
Sbjct: 629 DNCLWQVVED 638
>sp|Q60HE5|MTHR_MACFA Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR
PE=2 SV=1
Length = 656
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/550 (44%), Positives = 340/550 (61%), Gaps = 25/550 (4%)
Query: 28 GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87
G ++ IA+ N +ET++H+TC +E+I L K G++N++ALRGDP
Sbjct: 102 GSDKETSSMMIASTAVNYCGLETILHMTCCCQRLEEITGHLHKAKQLGLKNIMALRGDPI 161
Query: 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147
D++ + +GGF A+DLVKHIRS +GDYF + VAGYP+GHP+ S+++D
Sbjct: 162 --GDQWEEEEGGFNYAVDLVKHIRSEFGDYFDLCVAGYPKGHPEA---------GSFEAD 210
Query: 148 LLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG 207
L +LK+KV AGAD IITQLF++ D F +FV C +GITCPIVPGI PI Y ++
Sbjct: 211 LKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVK 270
Query: 208 FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSAL 266
K ++P EI +EPIKDN+ A++ YGI L +C ++LA G + LH YTLN E +
Sbjct: 271 QSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCHELLASGLVPGLHFYTLNREMATT 330
Query: 267 AILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRW 326
+L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRW
Sbjct: 331 EVLKRLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRW 389
Query: 327 GDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------K 377
G+S +P++G L D+ +++ +S + L + W L S E ++E F Y G K
Sbjct: 390 GNSSSPAFGELKDYYLFYLKSKSPRELLLKMWGEELTSEESVFEVFVLYLSGEPNRNGHK 449
Query: 378 LRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVY 437
+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV+
Sbjct: 450 VTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPVVGWGPSGGYVF 508
Query: 438 QKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 496
QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +E
Sbjct: 509 QKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGRE 568
Query: 497 IIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY-I 555
IIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDND+ +
Sbjct: 569 IIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPL 628
Query: 556 NGDLFAVFAD 565
+ L+ V D
Sbjct: 629 DNCLWQVVED 638
>sp|Q5I598|MTHR_BOVIN Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2
SV=1
Length = 655
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/551 (43%), Positives = 347/551 (62%), Gaps = 27/551 (4%)
Query: 28 GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87
G ++ IA+ N +ET++H+TC + E+I L K G++N+LALRGDP
Sbjct: 101 GSDKETSSMVIASTAVNYCGLETILHMTCCHQSREEITGHLNKAKQLGLKNILALRGDPI 160
Query: 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147
D++ + +GGF A DLVKHIR+ +GDYF + VAGYP+GHP+ ES+++D
Sbjct: 161 G--DQWEEEEGGFNYATDLVKHIRNEFGDYFDVCVAGYPKGHPE---------GESFEAD 209
Query: 148 LLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG 207
L +LK+KV AGAD IITQLF++ + F +FV C +IGITCP++PGI PI Y ++
Sbjct: 210 LKHLKEKVAAGADFIITQLFFEAETFFRFVKACSEIGITCPVLPGIFPIQGYHSLRQLVK 269
Query: 208 FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSAL 266
K ++P +I +EPIKDN+ A++ YGI +C+++LA G + LH YTLN E + +
Sbjct: 270 LSKLEVPQQIKDVIEPIKDNDAAIRNYGIEQAVSLCQELLASGLVPGLHFYTLNREVATI 329
Query: 267 AILLNLGL-IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGR 325
+L LGL IE+ + R LPW + R EDVRPIFWA+RPKSY+ RT WD++P GR
Sbjct: 330 EVLKRLGLWIEDPR--RPLPWALSAHPKRRVEDVRPIFWASRPKSYIYRTQEWDEFPNGR 387
Query: 326 WGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG------- 376
WG+S +P++G L D+ +++ +S ++L + W L S E +++ F ++ G
Sbjct: 388 WGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFQVFAHHLSGEPNQNGY 447
Query: 377 KLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYV 436
K+ PW++ + L ET ++ E+L ++N +G LTINSQP +NG+ S VGWG GGYV
Sbjct: 448 KVTCLPWND-EPLAAETSLMKEELLRVNRRGILTINSQPNINGKPSSDPIVGWGPSGGYV 506
Query: 437 YQKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAK 495
+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +
Sbjct: 507 FQKAYLEFFTSRETVEALLQVLKKYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGR 566
Query: 496 EIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY- 554
EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDN++
Sbjct: 567 EIIQPTVVDPVSFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEFP 626
Query: 555 INGDLFAVFAD 565
++ L+ V D
Sbjct: 627 LDNCLWQVVED 637
>sp|Q9WU20|MTHR_MOUSE Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2
SV=2
Length = 654
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/550 (42%), Positives = 337/550 (61%), Gaps = 25/550 (4%)
Query: 28 GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87
G ++ IA+ N +ET++H+TC E+I L K G++N++ALRGDP
Sbjct: 101 GSDKETSSMMIASTAVNYCGLETILHMTCCQQRPEEITGHLHRAKQLGLKNIMALRGDP- 159
Query: 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147
D + +GGF+ A DLVKHIR+ + DYF I VAGYP GHPD ES++ D
Sbjct: 160 -VGDHWEAEEGGFSYATDLVKHIRTEFADYFDICVAGYPRGHPDA---------ESFEDD 209
Query: 148 LLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG 207
L +LK+KV AGAD IITQLF++ F FV C +IGI+CPI+PGI PI Y ++
Sbjct: 210 LKHLKEKVSAGADFIITQLFFEASTFFSFVKACTEIGISCPILPGIFPIQGYTSLRQLVK 269
Query: 208 FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSAL 266
K ++P +I +EPIKDN+ A++ YGI L +C+++L G + LH YTLN E + +
Sbjct: 270 LSKLEVPQKIKDVIEPIKDNDAAIRNYGIELAVSLCRELLDSGLVPGLHFYTLNREVATM 329
Query: 267 AILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRW 326
+L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRW
Sbjct: 330 EVLKQLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQDWDEFPNGRW 388
Query: 327 GDSRNPSYGALSDHQ--FMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLG-------K 377
G+S +P++G L D+ +++ +S ++L + W L S E ++E F++Y G +
Sbjct: 389 GNSSSPAFGELKDYYLFYLKSKSPREELLKMWGEELTSEESVFEVFEHYLSGEPNRHGYR 448
Query: 378 LRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVY 437
+ PW++ + L ET ++ E+L ++N G LTINSQP +N + S VGWG GGYV+
Sbjct: 449 VTCLPWND-EPLAAETSLMKEELLRVNRLGILTINSQPNINAKPSSDPVVGWGPSGGYVF 507
Query: 438 QKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKE 496
QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +E
Sbjct: 508 QKAYLEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGRE 567
Query: 497 IIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY-I 555
IIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDN++ +
Sbjct: 568 IIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEFPL 627
Query: 556 NGDLFAVFAD 565
+ L+ V D
Sbjct: 628 DSCLWQVVED 637
>sp|Q10258|MTHR1_SCHPO Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=met9 PE=1 SV=1
Length = 603
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/549 (44%), Positives = 324/549 (59%), Gaps = 28/549 (5%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
WGAGG++++LT I N +Q V+T MHLTCTNM E ID AL+ G +N+LALRG
Sbjct: 54 WGAGGTSSELTPGIVNVIQTDFEVDTCMHLTCTNMSTEMIDAALKRAHETGCRNILALRG 113
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
DP D + + + GF A DLV++IR+ Y D F I VAGYPEG+ PD +
Sbjct: 114 DPVKDTD-WTEGESGFRYASDLVRYIRTHYNDEFCIGVAGYPEGY----SPD-----DDI 163
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
+ +LK KVD GAD I+TQ+FYD D F+ +V+ R GI PI PGIMPI + F+R
Sbjct: 164 DESIKHLKLKVDEGADFIVTQMFYDVDNFIAWVDKVRAAGINIPIFPGIMPIQAWDSFIR 223
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
+ KIP L P+KD++E V+ G+ L EMC+K++A GI LH YT+N+EK+
Sbjct: 224 RAKWSGVKIPQHFMDTLVPVKDDDEGVRERGVELIVEMCRKLIASGITRLHFYTMNLEKA 283
Query: 265 ALAILLNLGLIEESKISRSLPWRPPTNV---------FRVKEDVRPIFWANRPKSYLSRT 315
I+ LGL++E+ P NV R+ E VRPIFW R +SY+SRT
Sbjct: 284 VKMIIERLGLLDENLA----PIVDTNNVELTNASSQDRRINEGVRPIFWRTRNESYVSRT 339
Query: 316 VGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCL 375
WD+ P GRWGDSR+P++G ++ R K++ W P KS +I + F YC
Sbjct: 340 DQWDELPHGRWGDSRSPAFGEFDAIRYGL-RMSPKEITTSWGSP-KSYSEIGDLFARYCE 397
Query: 376 GKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGY 435
K+ S PWS+L + E +I +QL +N FLTINSQPA+NGE+S GWG P GY
Sbjct: 398 KKISSLPWSDL-PISDEADLIRDQLLSMNRNAFLTINSQPALNGEKSSHPVFGWGPPNGY 456
Query: 436 VYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAK 495
V+QK Y+EFF P L L + K L +++ NK G+ N NAVTWGVFP +
Sbjct: 457 VFQKPYVEFFVHPSLLNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNR 516
Query: 496 EIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYI 555
EIIQPT+V+ SF WKDEA+ + WA+ Y SRKLL + ++L +VDND+
Sbjct: 517 EIIQPTIVESTSFLAWKDEAYSL-GMEWANAYSPDSISRKLLVSMMKEWFLCVIVDNDFQ 575
Query: 556 NGD-LFAVF 563
NG LF VF
Sbjct: 576 NGQSLFDVF 584
>sp|P53128|MTHR2_YEAST Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MET13 PE=1 SV=2
Length = 600
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/546 (42%), Positives = 329/546 (60%), Gaps = 22/546 (4%)
Query: 25 WGAGGS-TADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR 83
W AGG + L+ D+ Q+ + +ET MHLTCTNMP+ ID AL+ +G QN+LALR
Sbjct: 55 WNAGGGRLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALR 114
Query: 84 GDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNES 143
GDPP + + ++GGF A DL+K+I+S YGD+F I VAGYPE HP+ N+
Sbjct: 115 GDPPRDAENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPEL-------PNKD 167
Query: 144 YQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFL 203
+ DL YLK+K+DAG D IITQ+FYD D F+ + + R G+ PI+PGIMPI Y FL
Sbjct: 168 VKLDLEYLKQKIDAGGDFIITQMFYDVDNFINWCSQVRAAGMDVPIIPGIMPITTYAAFL 227
Query: 204 RMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNME 262
R + + IP ++ L+PIKD++E V+ G +L EMC+K+L G + LH+YT+N+E
Sbjct: 228 RRAQWGQISIPQHFSSRLDPIKDDDELVRDIGTNLIVEMCQKLLDSGYVSHLHIYTMNLE 287
Query: 263 KSALAILLNLGLI-EESKISRS----LPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVG 317
K+ L IL L ++ ES+ + LPWR N R E+VRPIFW RP SY++RT
Sbjct: 288 KAPLMILERLNILPTESEFNAHPLAVLPWRKSLNPKRKNEEVRPIFWKRRPYSYVARTSQ 347
Query: 318 W--DQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCL 375
W D++P GR+GDS +P++G L R K E W+ P S+ D+ NY
Sbjct: 348 WAVDEFPNGRFGDSSSPAFGDLDLCGSDLIRQSANKCLELWSTP-TSINDVAFLVINYLN 406
Query: 376 GKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGY 435
G L+ PWS++ + E I L ++N +TINSQP VNG RS+ GWG GY
Sbjct: 407 GNLKCLPWSDI-PINDEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGY 465
Query: 436 VYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKAN-VNQTDVNAVTWGVFPA 494
VYQK YLEF KL L+D K F+T+ A++ +G+ +N + + NAVTWG+FP
Sbjct: 466 VYQKQYLEFMLPKTKLPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPG 525
Query: 495 KEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDS--SRKLLEEVQSSYYLVSLVDN 552
+EI+QPT+V+ SF WK+E + I + W + D S + ++ + Y LV++VDN
Sbjct: 526 REILQPTIVEKISFLAWKEEFYHILNE-WKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDN 584
Query: 553 DYINGD 558
DYI+ D
Sbjct: 585 DYISPD 590
>sp|Q17693|MTHR_CAEEL Probable methylenetetrahydrofolate reductase OS=Caenorhabditis
elegans GN=C06A8.1 PE=2 SV=2
Length = 663
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/552 (41%), Positives = 331/552 (59%), Gaps = 37/552 (6%)
Query: 25 WGAGGSTADL-----TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNV 79
W G A++ + IA M + V+TM+H+TC L+ K+ G++++
Sbjct: 108 WHMGSDPANVDKVTSSSSIAASMLDYCGVDTMLHMTCVQYNKADTLKHLEQAKAMGLRSI 167
Query: 80 LALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139
LALRGD P G + ++ F ALD+++ IR YG+YF I AGYP GHP
Sbjct: 168 LALRGDLPPGTE--LEDTHQFR-ALDMIRWIREEYGNYFSIGCAGYPLGHPQA------- 217
Query: 140 SNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNY 199
SY++DL+YLK K DAGA+ +ITQLF++ + F KFV DCR+IGIT PI+PGIMPI Y
Sbjct: 218 --PSYKADLMYLKAKCDAGANFVITQLFFEAETFEKFVRDCREIGITQPIIPGIMPIMGY 275
Query: 200 KGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK-TLHLYT 258
+ R+ + +IP I LEPIK +++AV+ YG EMC+++L +G ++HLYT
Sbjct: 276 ESIKRIAKLSQLEIPQHILDDLEPIKHDDDAVQKYGTERCIEMCRRLLDNGTAPSIHLYT 335
Query: 259 LNMEKSALAILLNLGLIEESKISRSLPWRPPT-NVFRVKEDVRPIFWANRPKSYLSRTVG 317
+N E S IL +LGL + R PW+ + + R E VRPI+W+ RP+SY++RT
Sbjct: 336 MNREGSIREILKSLGLWKLEG-DRVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRTRD 394
Query: 318 WDQYPRGRWGDSRNPSYGALSDH---QFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYC 374
WDQ+P GRWG+S +P++G +S + R+ D +L + ++S ED+ F NY
Sbjct: 395 WDQFPNGRWGNSSSPAFGDVSSYYLSNLTTVRNADDRL-AMFGANIESFEDVKRVFINYI 453
Query: 375 LG-------KLRSSPWSELD-GLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSS 426
K+ PW+E + G+QPET +I+EQL N G LT+NSQP+VNG S
Sbjct: 454 TQAPNADGVKVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPL 513
Query: 427 VGWGGPGGYVYQKAYLEFFCSPE---KLTALVDKSKALPFITFMAVNKEGNW-KANVNQT 482
VGWG PGGY YQKAYLE F + E KL ++++ + + + A+NK+ + K N +T
Sbjct: 514 VGWGKPGGYCYQKAYLECFMTAELSDKLIQIIEREFPVR-VNYHAINKDSTFDKTNSEET 572
Query: 483 DVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQS 542
AVTWGVFP EI QPTVVDP SF+ W+DEA+++W W YP+ S +++ V
Sbjct: 573 TPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFYPKESKSYGVIKAVHD 632
Query: 543 SYYLVSLVDNDY 554
+ LV+LVDND+
Sbjct: 633 EFRLVTLVDNDF 644
>sp|O74927|MTHR2_SCHPO Methylenetetrahydrofolate reductase 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=met11 PE=2 SV=2
Length = 641
Score = 311 bits (796), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 307/586 (52%), Gaps = 63/586 (10%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
WG GSTA++++ +A ++ + +HLTCTN+ ID AL+T K GI+N+LALRG
Sbjct: 53 WGTAGSTAEVSIYLAKMLEQHHKIPACLHLTCTNVDKAIIDKALETAKEYGIRNILALRG 112
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
DPP D + F A+DLV++IR YGDYF I VA YPEGH D+ P+ ++
Sbjct: 113 DPPLNSDHWEGKVSEFEHAVDLVRYIREKYGDYFCIGVAAYPEGHVDSNVPE---LSKDP 169
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITC----PIVPGIMPINNYK 200
D+ +L +KV+AGAD IITQ+FY+ + F+KF N R PI+P IMPI +Y
Sbjct: 170 LRDIPFLIEKVEAGADFIITQIFYEPEAFIKFENFVRNHSSNALRNIPIIPAIMPIQSYG 229
Query: 201 GFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAH---GIKTLHLY 257
RMT C +P+ + L K ++EA+K G+ +M KKI+ + + H
Sbjct: 230 SLKRMTRLCGCSVPSSLMQRLNAAKPDDEAIKNIGVEHIVDMIKKIMDNVQGRVHGFHFC 289
Query: 258 TLNMEKSALAILLNLGLI-----------EESKISRS------------------LPWRP 288
TLN+E+S IL N GL+ E+ K+ R+ +P +
Sbjct: 290 TLNLERSVALILKNSGLLTKRWKQVESEMEDEKLLRTTRKRLSLDEPAELHNQVVVPSQQ 349
Query: 289 P-----TNVFRVKEDV-----------RPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNP 332
P +N+F + F + L R WD + GR+GD R+P
Sbjct: 350 PVADKSSNLFVTSKQSSVSGHKDNLTEEAPFSVSEGSGVLGRQANWDDFTNGRFGDPRSP 409
Query: 333 SYGALSDH--QFMRPRSRDKKLHEEWAVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQ 390
+YG + + P S KL W P+ DI F+ + + + + PW + + ++
Sbjct: 410 AYGEIDGYGPTLHFPPSEALKL---WGYPVDE-SDITSLFQKHIMSDISAIPWID-EPVE 464
Query: 391 PETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEK 450
ETK I + L K+N + T+ SQPAVNG S GWG GG V+QKA++E F + +
Sbjct: 465 VETKTIAKYLLKLNGNSWWTVGSQPAVNGAPSADPVFGWGPKGGRVFQKAFVECFVNGKD 524
Query: 451 LTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKV 510
L + K P +T+ A N + + N + +AVTWGV+P +EIIQ T++ SFK
Sbjct: 525 LKDFITKWHDNPQVTYYAGNNKSEFLTNAPKDGASAVTWGVYPGREIIQSTIIAEVSFKA 584
Query: 511 WKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYIN 556
W E+F++W WA+LY + SRKLLE + +LV+++ +D+++
Sbjct: 585 WLSESFQVWGE-WANLYSKNTPSRKLLENCINDRWLVTVIHHDFMD 629
>sp|P46151|MTHR1_YEAST Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MET12 PE=1 SV=2
Length = 657
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/255 (42%), Positives = 150/255 (58%), Gaps = 10/255 (3%)
Query: 22 TSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLA 81
T WGAGG+TA+ TL +A+ Q T+ + MHLTCTN ID AL + GI+N+LA
Sbjct: 47 TVTWGAGGTTAEKTLTLASLAQQTLNIPVCMHLTCTNTEKAIIDDALDRCYNAGIRNILA 106
Query: 82 LRGDPPHGQD--KFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139
LRGDPP G+D + F A+DLV++I+ +YGD F + VA YPEGH + +
Sbjct: 107 LRGDPPIGEDWLDSQSNESPFKYAVDLVRYIKQSYGDKFCVGVAAYPEGHCEG---EAEG 163
Query: 140 SNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ-IGITCPIVPGIMPINN 198
+ DL+YLK+KV+AGAD +ITQLFYD + FL F R+ I P+ PG+MPIN+
Sbjct: 164 HEQDPLKDLVYLKEKVEAGADFVITQLFYDVEKFLTFEMLFRERISQDLPLFPGLMPINS 223
Query: 199 YKGFLRMTGFCKTKIPAEITAALEP-IKDNEEAVKAYGIHLGAEMCKKILAHG---IKTL 254
Y F R IP I + P I+ ++ AVK+ G+ + E+ ++I IK
Sbjct: 224 YLLFHRAAKLSHASIPPAILSRFPPEIQSDDNAVKSIGVDILIELIQEIYQRTSGRIKGF 283
Query: 255 HLYTLNMEKSALAIL 269
H YTLN+EK+ I+
Sbjct: 284 HFYTLNLEKAIAQIV 298
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 143/251 (56%), Gaps = 9/251 (3%)
Query: 312 LSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVPLKSVEDIYEKFK 371
L R WD++P GR+GDSR+P+YG + + S+ K L E W +P K++ D+ + F
Sbjct: 402 LGRDATWDEFPNGRFGDSRSPAYGEIDGYGPSIKVSKSKAL-ELWGIP-KTIGDLKDIFI 459
Query: 372 NYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGG 431
Y G + PWS+L GL ET +I E+L ++N +G+LT+ SQPA N S GWG
Sbjct: 460 KYLEGSTDAIPWSDL-GLSAETALIQEELIQLNYRGYLTLASQPATNATLSSDKIFGWGP 518
Query: 432 PGGYVYQKAYLEFFCSPEK----LTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAV 487
G +YQKA++E F ++ L +D F ++ A + G+++ N++ + V
Sbjct: 519 AKGRLYQKAFVEMFIHRQQWETTLKPKLDHYGRRKF-SYYAGDSSGSFETNLDPHSSSVV 577
Query: 488 TWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLV 547
TWGVFP + Q T+++ SFK W+DEAF IWS WA L+P + LL V Y LV
Sbjct: 578 TWGVFPNSPVKQTTIIEEESFKAWRDEAFSIWSE-WAKLFPRNTPANILLRLVHKDYCLV 636
Query: 548 SLVDNDYINGD 558
S+V +D+ D
Sbjct: 637 SIVHHDFKETD 647
>sp|O67422|METF_AQUAE 5,10-methylenetetrahydrofolate reductase OS=Aquifex aeolicus
(strain VF5) GN=metF PE=3 SV=1
Length = 296
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 135/244 (55%), Gaps = 9/244 (3%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
+GAGGST D T +I ++ + M HLTC E++ LQ K+ GI+N+LALRG
Sbjct: 49 YGAGGSTRDRTRNIVQKIHEETNLTVMAHLTCIAHTREELIDILQDYKNIGIENILALRG 108
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
D P + + +G A +LV+ IR +GD+F I VA YPEGHP++ +
Sbjct: 109 DVPRDKPDWRPPKGACKYAKELVELIRKEFGDWFSIGVASYPEGHPES---------PNL 159
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
+ ++ Y K+KV+AGAD ITQ+F+ D + +FV C+ GI I+PGIMPI N+K +
Sbjct: 160 EWEVKYFKEKVEAGADFSITQMFFVNDYYYRFVEMCKNAGIDISIIPGIMPITNFKQIRK 219
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
C IP + LE ++D E VK GI C ++ HG+ LH YTLN +
Sbjct: 220 FASLCGATIPQSLIEKLEKVEDKPEEVKKIGIEFAINQCLDLIEHGVPGLHFYTLNKSDA 279
Query: 265 ALAI 268
L I
Sbjct: 280 TLKI 283
>sp|P0AEZ2|METF_SHIFL 5,10-methylenetetrahydrofolate reductase OS=Shigella flexneri
GN=metF PE=3 SV=1
Length = 296
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 23/277 (8%)
Query: 4 RTCSSGWTAWWPTTRHSA------TSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCT 57
RT T W R S+ + +GA D T I +++ +E HLTC
Sbjct: 33 RTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCI 92
Query: 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY 117
+ +++ + +NGI++++ALRGD P G K A DLV ++
Sbjct: 93 DATPDELRTIARDYWNNGIRHIVALRGDLPPGSGK------PEMYASDLVTLLKEVAD-- 144
Query: 118 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFV 177
F I+VA YPE HP+ +S Q+DLL LK+KVDAGA+ ITQ F+D + +L+F
Sbjct: 145 FDISVAAYPEVHPEA---------KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFR 195
Query: 178 NDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIH 237
+ C GI I+PGI+P++N+K + +IPA + + + D+ E K G +
Sbjct: 196 DRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGAN 255
Query: 238 LGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 274
+ +M K + G+K H YTLN + + AI LG+
Sbjct: 256 IAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
>sp|P0AEZ1|METF_ECOLI 5,10-methylenetetrahydrofolate reductase OS=Escherichia coli
(strain K12) GN=metF PE=1 SV=1
Length = 296
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 23/277 (8%)
Query: 4 RTCSSGWTAWWPTTRHSA------TSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCT 57
RT T W R S+ + +GA D T I +++ +E HLTC
Sbjct: 33 RTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCI 92
Query: 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY 117
+ +++ + +NGI++++ALRGD P G K A DLV ++
Sbjct: 93 DATPDELRTIARDYWNNGIRHIVALRGDLPPGSGK------PEMYASDLVTLLKEVAD-- 144
Query: 118 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFV 177
F I+VA YPE HP+ +S Q+DLL LK+KVDAGA+ ITQ F+D + +L+F
Sbjct: 145 FDISVAAYPEVHPEA---------KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFR 195
Query: 178 NDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIH 237
+ C GI I+PGI+P++N+K + +IPA + + + D+ E K G +
Sbjct: 196 DRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGAN 255
Query: 238 LGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 274
+ +M K + G+K H YTLN + + AI LG+
Sbjct: 256 IAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
>sp|Q9JZQ3|METF_NEIMB 5,10-methylenetetrahydrofolate reductase OS=Neisseria meningitidis
serogroup B (strain MC58) GN=metF PE=1 SV=1
Length = 292
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 130/250 (52%), Gaps = 17/250 (6%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
+GA D T I R++ +E HLT + +++ + +GI+ ++ALRG
Sbjct: 58 YGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAKDYWDSGIRRIVALRG 117
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
D P G +K A DLVK +RS F I+VA YPE HP+ +S
Sbjct: 118 DEPAGYEK------KPFYAEDLVKLLRSVAD--FDISVAAYPEVHPEA---------KSA 160
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
Q+DL+ LK+K+DAGA+ +ITQ F+D + +L+F + C +GI IVPGI+P+ N+K +
Sbjct: 161 QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQLGK 220
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
M KIP+ ++ E + D++ + +M K + G+K H YTLN +
Sbjct: 221 MAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLNRSEL 280
Query: 265 ALAILLNLGL 274
AI LG+
Sbjct: 281 TYAICHILGV 290
>sp|P11003|METF_SALTY 5,10-methylenetetrahydrofolate reductase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=metF PE=3 SV=2
Length = 296
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 139/277 (50%), Gaps = 23/277 (8%)
Query: 4 RTCSSGWTAWWPTTRHSA------TSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCT 57
RT T W R S+ + +GA D T + ++ +E HLTC
Sbjct: 33 RTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSVIKGIKERTGLEAAPHLTCI 92
Query: 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY 117
+ +++ + +NGI++++ALRGD P G K A DLV ++
Sbjct: 93 DATRDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMY------AADLVGLLKEVAD-- 144
Query: 118 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFV 177
F I+VA YPE HP+ +S Q+DLL LK+KVDAGA+ ITQ F+D + +L+F
Sbjct: 145 FDISVAAYPEVHPEA---------KSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFR 195
Query: 178 NDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIH 237
+ C GI I+PGI+P++N+K + +IP+ ++ E + ++ E K G +
Sbjct: 196 DRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPSWMSLMFEGLDNDAETRKLVGAN 255
Query: 238 LGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 274
+ +M K + G+K H YTLN + + AI LG+
Sbjct: 256 IAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV 292
>sp|P71319|METF_PECCC 5,10-methylenetetrahydrofolate reductase OS=Pectobacterium
carotovorum subsp. carotovorum GN=metF PE=3 SV=1
Length = 298
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 138/279 (49%), Gaps = 27/279 (9%)
Query: 4 RTCSSGWTAWWPTTRHSA------TSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCT 57
RT T W R S+ + +GA D T I ++ +E HLTC
Sbjct: 33 RTSDMEETLWSSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKTIKERTGLEAAPHLTCI 92
Query: 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGF--ACALDLVKHIRSAYG 115
+ E++ Q +GI++++ALRGD P +GG A DLV ++ G
Sbjct: 93 DASREQLREIAQDYWESGIRHIVALRGDLPQ--------EGGKPDMYAADLVSLLKEV-G 143
Query: 116 DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLK 175
D F I+VA YPE HP+ +S Q+DL+ LK K+DAGA+ ITQ F+D + +L+
Sbjct: 144 D-FDISVAAYPEVHPEA---------KSAQADLINLKHKIDAGANRAITQFFFDVESYLR 193
Query: 176 FVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYG 235
F + C GI IVPGI+P++N+K + ++P +T + + ++ E K G
Sbjct: 194 FRDRCVATGIDVEIVPGILPVSNFKQLQKFATMTNVRVPNWMTTMFDGLDNDPETRKMVG 253
Query: 236 IHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 274
+ +M K + G+K H YTLN + + AI LG+
Sbjct: 254 ASIAMDMVKILSREGVKDFHFYTLNRAELSYAICHTLGV 292
>sp|P45208|METF_HAEIN 5,10-methylenetetrahydrofolate reductase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=metF PE=3
SV=1
Length = 292
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 17/250 (6%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
+GA D T I ++ +E HLT + E++ + +GI+ ++ALRG
Sbjct: 58 YGANSGERDRTHGIVKAIKQETGLEAAPHLTGIDATPEELKQIARDYWDSGIRRIVALRG 117
Query: 85 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
D P G K + +A DLV+ +RS F I+VA YPE HP+ +S
Sbjct: 118 DEPKGYAK----KPFYAS--DLVELLRSVAD--FDISVAAYPEVHPEA---------KSA 160
Query: 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204
Q+DL+ LK+K+DAGA+ +ITQ F+D + +L+F + C IGI IVPGI+P+ N+K +
Sbjct: 161 QADLINLKRKIDAGANHVITQFFFDIENYLRFRDRCASIGIDTEIVPGILPVTNFKQLQK 220
Query: 205 MTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKS 264
M F KIPA + A + + ++ + +M K + G+ H YTLN +
Sbjct: 221 MASFTNVKIPAWLVKAYDGLDNDPTTRNLVAASVAMDMVKILSREGVNDFHFYTLNRSEL 280
Query: 265 ALAILLNLGL 274
AI LG+
Sbjct: 281 TYAICHMLGV 290
>sp|O54235|METF_STRLI 5,10-methylenetetrahydrofolate reductase OS=Streptomyces lividans
GN=metF PE=3 SV=1
Length = 307
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 12/251 (4%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
+GAGGST T+ ++ + + HLT + V ++ + + GI+N+LA+RG
Sbjct: 62 YGAGGSTRAGTVRETQQIVADTTLTPVAHLTAVDHSVAELRNIIGQYADAGIRNMLAVRG 121
Query: 85 DPPHGQDK-FVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNES 143
DPP + ++ G A +LV+ I+ + GD F + VA +PE HP +
Sbjct: 122 DPPGDPNADWIAHPEGLTYAAELVRLIKES-GD-FCVGVAAFPEMHP---------RSAD 170
Query: 144 YQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFL 203
+ +D+ K AGAD ITQ+F+ D +L+ + G P++P +MP+ + K
Sbjct: 171 WDTDVTNFVDKCRAGADYAITQMFFQPDSYLRLRDRVAAAGCATPVIPEVMPVTSVKMLE 230
Query: 204 RMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEK 263
R+ PAE+ + KD+ AV++ GI E C ++LA G+ LH TLN
Sbjct: 231 RLPKLSNASFPAELKERILTAKDDPAAVRSIGIEFATEFCARLLAEGVPGLHFITLNNST 290
Query: 264 SALAILLNLGL 274
+ L I NLGL
Sbjct: 291 ATLEIYENLGL 301
>sp|Q89B13|METF_BUCBP 5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=metF PE=3 SV=1
Length = 295
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 32 ADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 91
A T +I +++ +ET+ HLTC N E++ +T +GI+++LALRGD +
Sbjct: 68 ATCTSNIVKKIKKYTGIETVPHLTCINSTEEELKVIAKTYWDSGIRHILALRGDIFNTNC 127
Query: 92 KFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYL 151
K A+DL+K ++S F I+VA YPE HP+ A N Y D++ L
Sbjct: 128 K------PKIYAVDLIKLLKSIAN--FEISVAAYPEVHPE-------AVNAKY--DIINL 170
Query: 152 KKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211
K+KV+AGA ITQ F++ D FL+F + C + IT IVPGI PI+N+K L+ +
Sbjct: 171 KRKVEAGATRAITQFFFNIDCFLRFRDLCVKNNITIDIVPGIFPISNFKQLLKFSSVSNV 230
Query: 212 KIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAI 268
IP + + ++ + G + +M K + + GI++ H YTLN + + AI
Sbjct: 231 SIPKWLCCMFHGLDNDLNTSRIIGSSIAIDMVKVLYSEGIRSFHFYTLNKSEISFAI 287
>sp|P57154|METF_BUCAI 5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=metF PE=3
SV=1
Length = 292
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 25/254 (9%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSN----GIQNVL 80
+GA + T D ++ + T HLTC ++ H L+ I N GI++++
Sbjct: 60 YGANTGEREKTYDTVQKIYKKTGIITAAHLTC----IDSTPHKLKEIAYNYWNSGIKSIV 115
Query: 81 ALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVAS 140
ALRGD + A+DLV ++ F I+VA YPE HP++
Sbjct: 116 ALRGDTLEKDYRHTMY------AVDLVLLLKKIAD--FDISVAAYPELHPES-------- 159
Query: 141 NESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYK 200
++ +SD+L LKKKVDAGA ITQ F++ + +L+F ++C + I I+PGI+P+ N++
Sbjct: 160 -KNVKSDILNLKKKVDAGASRAITQFFFNIESYLRFRDNCIKNKINIDIIPGILPVCNFQ 218
Query: 201 GFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLN 260
R + KIP + + D+ K G + +M KK+ G+K H YTLN
Sbjct: 219 KLKRFSSMTNVKIPKWMLDMFNGLDDDIFTQKIIGSSIAIDMVKKLSCEGVKNFHFYTLN 278
Query: 261 MEKSALAILLNLGL 274
+I LGL
Sbjct: 279 QSDITYSICHILGL 292
>sp|Q8KA62|METF_BUCAP 5,10-methylenetetrahydrofolate reductase OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=metF PE=3 SV=1
Length = 292
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 125/252 (49%), Gaps = 21/252 (8%)
Query: 25 WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG 84
+GA T I R+ + T HLTC + + ++ + NGI++++ALRG
Sbjct: 60 YGANSGERKKTYSIVQRIHKKTGITTAPHLTCVDASLSELKEIAKFYWENGIRSIVALRG 119
Query: 85 DPPHG--QDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNE 142
D P+ Q K ALDLV ++ F I+VA YPE HP++ +
Sbjct: 120 DVPNKSYQHKIY--------ALDLVVLLKKIAD--FDISVAAYPEIHPES---------K 160
Query: 143 SYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGF 202
+ QSD+L LKKK DAGA+ ITQ F++ + +L+F ++C + I I+PGI+PI N++
Sbjct: 161 NAQSDILNLKKKADAGANRAITQFFFNVESYLRFRDNCIKNNINIEIIPGILPIYNFEQL 220
Query: 203 LRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNME 262
+ + IP + + ++ E K G ++ + K +L G+K H YTLN
Sbjct: 221 KKFSSMTNVSIPKWMFEMFNGLDEDLETQKIIGSNIVINIVKTLLYEGVKNFHFYTLNKS 280
Query: 263 KSALAILLNLGL 274
+I GL
Sbjct: 281 DVIYSICHMFGL 292
>sp|O06745|YITJ_BACSU Bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase OS=Bacillus subtilis (strain 168) GN=yitJ PE=2
SV=1
Length = 612
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 41 RMQNTIC---------VETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 91
R+ N C + +++H+TC + + + L + + G+ +VLA+ GDP
Sbjct: 361 RISNVACGALVKQQLDMRSLVHITCRDRNIIGLQSHLMGLDTLGLNDVLAITGDPS---- 416
Query: 92 KFVQIQGGFAC----ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147
K G + + DL++ I+ + + G++++G P G + D
Sbjct: 417 KIGDFPGATSVYDLTSFDLIRLIKQ-FNE--GLSLSGKPLGKKTNFSVAAAFNPNVRHLD 473
Query: 148 --LLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205
+ L+KK+D GAD ++Q Y + N+ + + PI GIMP+ + R
Sbjct: 474 KAVKRLEKKIDCGADYFVSQPVYSEQQLVDIHNETKH--LKTPIYIGIMPLTSS----RN 527
Query: 206 TGFCKTKIP 214
F +IP
Sbjct: 528 AEFIHNEIP 536
>sp|Q8TD84|DSCL1_HUMAN Down syndrome cell adhesion molecule-like protein 1 OS=Homo sapiens
GN=DSCAML1 PE=1 SV=2
Length = 2053
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 284 LPWRPPTNV--FRVKEDVRPIFWANRPKSYLS------RTVGWDQYPRGRWGDSRN 331
+P +PP NV + DV I W+ P+S L+ R + W Y G WG+ +N
Sbjct: 1089 VPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN 1144
>sp|Q4VA61|DSCL1_MOUSE Down syndrome cell adhesion molecule-like protein 1 homolog OS=Mus
musculus GN=Dscaml1 PE=1 SV=2
Length = 2053
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 284 LPWRPPTNV--FRVKEDVRPIFWANRPKSYLS------RTVGWDQYPRGRWGDSRN 331
+P +PP NV + DV I W+ P+S L+ R + W Y G WG+ +N
Sbjct: 1089 VPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWGEMQN 1144
>sp|P55849|DSC1_MOUSE Desmocollin-1 OS=Mus musculus GN=Dsc1 PE=1 SV=2
Length = 886
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 213 IPAEITAALEPIKDN-EEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILL 270
+P+ + A K N EE +K+ + L ++ +IL G I T H L+ EK +ILL
Sbjct: 37 VPSHLKAETPVGKVNLEECLKSPSLILSSDPAFRILEDGTIYTTHDLLLSSEKRGFSILL 96
Query: 271 NLGLIEESKISRSLPWRPPTNVFRVKEDVRPIF------WANRPKSYLSRTVG 317
+ G +E K + VFR + P+ WA P S + ++G
Sbjct: 97 SDGQGQEQKKLEVVLSAREKKVFRKRHTKEPVHNRSKRRWAPIPCSLMENSLG 149
>sp|B2IIK5|MIAB_BEII9 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Beijerinckia indica subsp. indica (strain ATCC 9039 /
DSM 1715 / NCIB 8712) GN=miaB PE=3 SV=1
Length = 510
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Query: 45 TICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACAL 104
+ CV T+ PVE I ++T+ ++G++ V L G + F + G A
Sbjct: 200 SFCVVPYTRGAETSRPVEAILAEVETLIASGVREV-TLIGQNVNAYHGFDAMTGAPASLA 258
Query: 105 DLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT 164
L+ + + G+ Y HP+ +G D +A++ + + +L V +G+D I+
Sbjct: 259 SLMARVAA----MPGLLRIRYTTSHPNDMGEDLIAAHRDIPALMPFLHLPVQSGSDKILA 314
Query: 165 QL 166
+
Sbjct: 315 AM 316
>sp|O84786|SYK_CHLTR Lysine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=lysS PE=3 SV=1
Length = 526
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 364 EDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGK 402
E + E+F+++CLGK + +SEL+ + K++ EQ+ K
Sbjct: 424 ETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRK 462
>sp|B0BAN6|SYK_CHLTB Lysine--tRNA ligase OS=Chlamydia trachomatis serovar L2b (strain
UCH-1/proctitis) GN=lysS PE=3 SV=1
Length = 526
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 364 EDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGK 402
E + E+F+++CLGK + +SEL+ + K++ EQ+ K
Sbjct: 424 ETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRK 462
>sp|Q3KKR1|SYK_CHLTA Lysine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=lysS PE=3 SV=1
Length = 526
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 364 EDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGK 402
E + E+F+++CLGK + +SEL+ + K++ EQ+ K
Sbjct: 424 ETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRK 462
>sp|B0B907|SYK_CHLT2 Lysine--tRNA ligase OS=Chlamydia trachomatis serovar L2 (strain
434/Bu / ATCC VR-902B) GN=lysS PE=3 SV=1
Length = 526
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 364 EDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGK 402
E + E+F+++CLGK + +SEL+ + K++ EQ+ K
Sbjct: 424 ETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRK 462
>sp|Q9PLE1|SYK_CHLMU Lysine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=lysS PE=3 SV=1
Length = 524
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 364 EDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGK 402
E + E+F+++CLGK + +SEL+ + K++ EQ+ K
Sbjct: 424 ETLVERFESFCLGKELCNAYSELNDPLQQRKLLEEQMRK 462
>sp|A6TRF9|ISPH_ALKMQ 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ispH PE=3 SV=1
Length = 280
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 23/89 (25%)
Query: 106 LVKHIRSAYGDYFG----ITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADL 161
VK I++ +YF I + G PE HP+ IG +G +NE+Y
Sbjct: 99 FVKKIQNIVEEYFNKGYKIAIIGNPE-HPEVIGINGWCNNEAYT---------------- 141
Query: 162 IITQLFYDTDMFLKFVNDCRQIGITCPIV 190
Q D D+ K C + T PIV
Sbjct: 142 --VQQITDVDLIPKLDKVCIVVQTTMPIV 168
>sp|A7HZ82|MIAB_PARL1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023
/ NCIMB 13966) GN=miaB PE=3 SV=1
Length = 467
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 27 AGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86
A G+TA LT+ T CV + + PV +I +++ G++ + L +
Sbjct: 164 ARGATAFLTIQEGCDKFCTFCVVPYTRGSEFSRPVARILDEARSLVDAGVREITLLGQNV 223
Query: 87 P--HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESY 144
HG+D Q G L ++ A + G+ Y HP + + +A++
Sbjct: 224 NAWHGED-----QAGRPATLG---YLIRALAEIEGLARLRYTTSHPRDMDEELIAAHRDV 275
Query: 145 QSDLLYLKKKVDAGADLIITQL--FYDTDMFLKFVNDCR 181
+ + YL V +G+D I+ + +D D + + + R
Sbjct: 276 PALMPYLHLPVQSGSDRILAAMNRRHDADSYHRIIGRIR 314
>sp|Q0AHC1|CYSG_NITEC Siroheme synthase OS=Nitrosomonas eutropha (strain C91) GN=cysG
PE=3 SV=1
Length = 476
Score = 33.1 bits (74), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 225 KDNEEAVKAYGIHLGAEMCKKILAHGI-KTLHLYTLNMEKSALAILLNLGLIEESKISRS 283
+ N+ V G+ +E+C++++AHG+ KT + + +L L I +
Sbjct: 376 RPNQTIVVYMGLLGVSELCRQLIAHGLPKTTPAAIIQQGTTPNQCVLTGTLATLPTIIQE 435
Query: 284 LPWRPPTNVFRVKEDVR---PIFWANRPKSYLSRTVGWDQYP 322
P +PPT + V E V+ + W N L T G+ ++P
Sbjct: 436 NPLKPPTLII-VGEVVKLRQRLAWFNSTSESLGNTPGYSKHP 476
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,313,259
Number of Sequences: 539616
Number of extensions: 9799653
Number of successful extensions: 20998
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 20883
Number of HSP's gapped (non-prelim): 44
length of query: 566
length of database: 191,569,459
effective HSP length: 123
effective length of query: 443
effective length of database: 125,196,691
effective search space: 55462134113
effective search space used: 55462134113
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)