Query 008423
Match_columns 566
No_of_seqs 275 out of 1290
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 03:12:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008423.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008423hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fst_A 5,10-methylenetetrahydr 100.0 2.9E-68 9.8E-73 548.4 31.4 252 9-277 44-295 (304)
2 3apt_A Methylenetetrahydrofola 100.0 7.5E-68 2.6E-72 546.7 29.4 258 10-277 35-292 (310)
3 3ijd_A Uncharacterized protein 100.0 1.5E-50 5.2E-55 417.7 12.8 217 10-255 40-274 (315)
4 4e38_A Keto-hydroxyglutarate-a 96.5 0.031 1.1E-06 55.4 13.4 101 58-204 42-142 (232)
5 3lab_A Putative KDPG (2-keto-3 96.3 0.023 7.9E-07 55.8 11.3 104 49-197 14-123 (217)
6 1geq_A Tryptophan synthase alp 94.2 0.39 1.3E-05 46.5 12.0 138 49-206 6-153 (248)
7 1wa3_A 2-keto-3-deoxy-6-phosph 94.2 0.44 1.5E-05 44.7 12.0 103 49-195 11-113 (205)
8 3nav_A Tryptophan synthase alp 93.8 2.1 7E-05 43.1 16.7 175 32-248 81-267 (271)
9 1vhc_A Putative KHG/KDPG aldol 93.3 1.1 3.8E-05 43.7 13.5 120 34-204 6-125 (224)
10 1rd5_A Tryptophan synthase alp 93.2 0.05 1.7E-06 53.7 3.7 134 48-206 18-163 (262)
11 3vnd_A TSA, tryptophan synthas 92.5 4.7 0.00016 40.4 16.9 174 33-248 80-265 (267)
12 2ekc_A AQ_1548, tryptophan syn 91.1 6.6 0.00023 38.7 16.2 168 33-248 79-258 (262)
13 1mxs_A KDPG aldolase; 2-keto-3 90.9 1.8 6E-05 42.3 11.5 145 59-271 35-186 (225)
14 3t7v_A Methylornithine synthas 89.1 3.1 0.00011 42.2 12.2 106 59-194 91-209 (350)
15 1wbh_A KHG/KDPG aldolase; lyas 88.5 4.6 0.00016 38.9 12.2 108 49-204 17-124 (214)
16 3iix_A Biotin synthetase, puta 88.1 3.8 0.00013 41.2 11.9 112 59-203 84-211 (348)
17 1jub_A Dihydroorotate dehydrog 87.4 2.5 8.4E-05 42.4 10.0 129 33-181 144-290 (311)
18 1qop_A Tryptophan synthase alp 87.3 11 0.00037 37.2 14.5 135 47-205 16-166 (268)
19 2ekc_A AQ_1548, tryptophan syn 86.0 26 0.00089 34.4 16.4 139 48-206 17-167 (262)
20 1f76_A Dihydroorotate dehydrog 85.7 4.5 0.00015 41.1 10.9 142 17-178 165-334 (336)
21 3k30_A Histamine dehydrogenase 83.8 5.9 0.0002 44.2 11.7 139 56-205 143-312 (690)
22 3zwt_A Dihydroorotate dehydrog 83.7 7.4 0.00025 40.6 11.7 115 46-181 219-346 (367)
23 1qop_A Tryptophan synthase alp 83.7 22 0.00076 34.9 14.7 175 34-248 80-264 (268)
24 3tha_A Tryptophan synthase alp 83.6 21 0.00073 35.4 14.5 152 33-224 76-237 (252)
25 3lop_A Substrate binding perip 82.3 5.5 0.00019 39.5 9.8 103 62-197 127-232 (364)
26 2yw3_A 4-hydroxy-2-oxoglutarat 82.2 7.3 0.00025 37.2 10.1 97 60-204 23-119 (207)
27 3ipc_A ABC transporter, substr 80.5 5.9 0.0002 39.0 9.2 48 146-199 184-231 (356)
28 3hut_A Putative branched-chain 80.1 14 0.00049 36.2 11.8 148 11-199 65-232 (358)
29 3snr_A Extracellular ligand-bi 79.7 21 0.00074 34.6 12.9 150 11-200 62-229 (362)
30 4ef8_A Dihydroorotate dehydrog 79.7 6.6 0.00023 40.9 9.5 141 18-181 156-325 (354)
31 1xky_A Dihydrodipicolinate syn 79.2 29 0.00099 34.9 13.9 128 59-222 30-163 (301)
32 3hgj_A Chromate reductase; TIM 79.0 27 0.00091 35.8 13.8 127 55-191 138-293 (349)
33 4evq_A Putative ABC transporte 78.9 41 0.0014 33.0 14.8 147 10-192 74-238 (375)
34 2cw6_A Hydroxymethylglutaryl-C 78.0 39 0.0013 33.7 14.4 178 7-220 83-294 (298)
35 1r30_A Biotin synthase; SAM ra 77.9 17 0.00057 37.2 11.9 111 59-202 99-225 (369)
36 1rpx_A Protein (ribulose-phosp 77.5 19 0.00065 34.1 11.4 166 10-218 29-211 (230)
37 3eb2_A Putative dihydrodipicol 77.5 33 0.0011 34.5 13.7 129 59-223 22-156 (300)
38 3kts_A Glycerol uptake operon 77.1 13 0.00043 35.7 9.9 69 68-166 22-90 (192)
39 1yxy_A Putative N-acetylmannos 76.9 9.1 0.00031 36.4 9.0 102 61-195 33-142 (234)
40 3khj_A Inosine-5-monophosphate 76.8 41 0.0014 34.8 14.5 30 244-273 285-314 (361)
41 3flu_A DHDPS, dihydrodipicolin 76.8 44 0.0015 33.4 14.4 130 59-224 25-160 (297)
42 3i65_A Dihydroorotate dehydrog 76.7 12 0.00041 39.9 10.6 114 47-181 268-393 (415)
43 3i09_A Periplasmic branched-ch 76.6 49 0.0017 32.6 14.7 131 32-193 81-229 (375)
44 3fkr_A L-2-keto-3-deoxyarabona 76.3 36 0.0012 34.4 13.6 126 59-221 26-160 (309)
45 3sg0_A Extracellular ligand-bi 76.1 12 0.0004 37.0 9.8 153 11-200 82-253 (386)
46 2qgq_A Protein TM_1862; alpha- 76.1 52 0.0018 32.6 14.7 105 57-183 31-151 (304)
47 3lkb_A Probable branched-chain 75.7 28 0.00095 34.7 12.7 146 11-192 68-230 (392)
48 3cpr_A Dihydrodipicolinate syn 75.1 72 0.0025 32.0 16.7 129 59-223 34-168 (304)
49 1tqj_A Ribulose-phosphate 3-ep 75.0 22 0.00074 34.3 11.2 167 11-218 24-205 (230)
50 2v82_A 2-dehydro-3-deoxy-6-pho 74.8 54 0.0018 30.4 14.7 111 47-204 6-116 (212)
51 1tqx_A D-ribulose-5-phosphate 74.7 50 0.0017 32.0 13.7 118 18-169 86-206 (227)
52 1ujp_A Tryptophan synthase alp 74.3 34 0.0012 34.0 12.7 154 31-223 75-238 (271)
53 2p10_A MLL9387 protein; putati 73.4 29 0.00099 35.3 11.8 147 33-208 79-249 (286)
54 3td9_A Branched chain amino ac 72.8 32 0.0011 33.8 12.1 151 11-198 74-241 (366)
55 3l21_A DHDPS, dihydrodipicolin 72.5 44 0.0015 33.6 13.2 129 59-223 33-167 (304)
56 3ih1_A Methylisocitrate lyase; 72.4 88 0.003 31.8 19.2 185 33-250 75-265 (305)
57 1z41_A YQJM, probable NADH-dep 72.3 49 0.0017 33.6 13.6 115 37-163 87-247 (338)
58 2f6k_A Metal-dependent hydrola 72.2 8.4 0.00029 37.5 7.6 111 63-190 36-152 (307)
59 3qze_A DHDPS, dihydrodipicolin 72.1 42 0.0014 34.0 12.9 129 59-223 41-175 (314)
60 2r8w_A AGR_C_1641P; APC7498, d 71.8 88 0.003 31.9 15.4 109 59-192 52-166 (332)
61 3n0w_A ABC branched chain amin 71.5 50 0.0017 32.7 13.3 100 64-193 130-232 (379)
62 2r91_A 2-keto-3-deoxy-(6-phosp 71.5 35 0.0012 34.0 12.0 126 58-220 15-145 (286)
63 1olt_A Oxygen-independent copr 71.4 88 0.003 32.9 15.8 104 102-260 122-243 (457)
64 1h5y_A HISF; histidine biosynt 70.9 31 0.0011 32.3 11.0 172 11-219 40-232 (253)
65 1o94_A Tmadh, trimethylamine d 70.9 50 0.0017 37.0 14.4 139 57-206 137-310 (729)
66 3sgz_A Hydroxyacid oxidase 2; 70.3 16 0.00056 38.0 9.5 33 58-91 131-163 (352)
67 3s5o_A 4-hydroxy-2-oxoglutarat 70.3 46 0.0016 33.5 12.7 129 59-223 32-168 (307)
68 2ojp_A DHDPS, dihydrodipicolin 70.2 36 0.0012 34.0 11.8 109 59-192 19-133 (292)
69 3na8_A Putative dihydrodipicol 70.0 36 0.0012 34.5 11.9 127 59-221 42-174 (315)
70 2rfg_A Dihydrodipicolinate syn 69.9 39 0.0013 33.8 12.1 129 58-222 17-151 (297)
71 3vnd_A TSA, tryptophan synthas 69.6 92 0.0032 30.9 15.0 143 46-207 16-169 (267)
72 3m5v_A DHDPS, dihydrodipicolin 69.6 50 0.0017 33.0 12.8 128 58-221 24-158 (301)
73 3qfe_A Putative dihydrodipicol 69.5 55 0.0019 33.1 13.2 129 59-222 29-165 (318)
74 2e6f_A Dihydroorotate dehydrog 69.0 12 0.00042 37.3 8.1 128 33-181 146-292 (314)
75 1geq_A Tryptophan synthase alp 68.9 44 0.0015 31.8 11.8 148 33-221 66-227 (248)
76 1ka9_F Imidazole glycerol phos 68.6 30 0.001 33.0 10.5 176 12-218 39-229 (252)
77 3eaf_A ABC transporter, substr 68.5 46 0.0016 33.2 12.3 142 10-192 68-231 (391)
78 1o5k_A DHDPS, dihydrodipicolin 68.3 1E+02 0.0035 30.9 14.8 129 58-222 29-163 (306)
79 3daq_A DHDPS, dihydrodipicolin 68.1 49 0.0017 33.0 12.3 130 58-223 19-154 (292)
80 1tv5_A Dhodehase, dihydroorota 67.8 38 0.0013 36.2 12.0 113 47-180 296-420 (443)
81 2hmc_A AGR_L_411P, dihydrodipi 67.8 49 0.0017 34.0 12.5 112 59-195 44-160 (344)
82 3o63_A Probable thiamine-phosp 67.8 30 0.001 33.9 10.4 89 108-219 126-224 (243)
83 2nuw_A 2-keto-3-deoxygluconate 67.6 25 0.00087 35.0 10.0 126 59-221 17-147 (288)
84 1tg7_A Beta-galactosidase; TIM 66.5 8.4 0.00029 45.3 7.0 111 118-249 21-144 (971)
85 3p3b_A Mandelate racemase/muco 66.2 27 0.00091 36.2 10.2 153 62-251 150-306 (392)
86 3si9_A DHDPS, dihydrodipicolin 66.0 59 0.002 32.9 12.5 128 59-222 40-173 (315)
87 3tak_A DHDPS, dihydrodipicolin 65.9 1.1E+02 0.0037 30.4 15.9 129 59-223 19-153 (291)
88 3f4w_A Putative hexulose 6 pho 65.7 60 0.002 30.0 11.7 160 17-219 25-192 (211)
89 3ctl_A D-allulose-6-phosphate 65.6 30 0.001 33.6 9.8 92 15-127 23-116 (231)
90 3jr2_A Hexulose-6-phosphate sy 65.1 24 0.00082 33.4 8.9 84 102-206 45-129 (218)
91 1w3i_A EDA, 2-keto-3-deoxy glu 64.8 33 0.0011 34.2 10.3 125 59-220 17-146 (293)
92 3h6g_A Glutamate receptor, ion 64.4 89 0.003 31.1 13.5 127 29-188 78-219 (395)
93 2ehh_A DHDPS, dihydrodipicolin 64.4 1.2E+02 0.004 30.2 15.4 128 58-221 17-150 (294)
94 1rpx_A Protein (ribulose-phosp 64.3 35 0.0012 32.2 9.9 119 49-199 12-131 (230)
95 1vp8_A Hypothetical protein AF 64.1 86 0.0029 30.2 12.3 136 51-250 17-154 (201)
96 2v9d_A YAGE; dihydrodipicolini 63.9 1.3E+02 0.0046 30.7 15.2 128 59-222 49-182 (343)
97 3a5f_A Dihydrodipicolinate syn 63.5 88 0.003 31.0 13.1 129 59-223 19-153 (291)
98 1h1y_A D-ribulose-5-phosphate 63.3 67 0.0023 30.4 11.8 165 10-218 25-205 (228)
99 1f6k_A N-acetylneuraminate lya 63.0 1.2E+02 0.0042 30.0 14.6 128 59-222 21-155 (293)
100 3b4u_A Dihydrodipicolinate syn 62.9 79 0.0027 31.5 12.7 129 59-222 21-158 (294)
101 1h1y_A D-ribulose-5-phosphate 62.8 37 0.0013 32.3 9.8 122 49-202 8-129 (228)
102 1z41_A YQJM, probable NADH-dep 62.7 68 0.0023 32.5 12.3 120 35-180 197-324 (338)
103 1tv8_A MOAA, molybdenum cofact 62.3 62 0.0021 32.2 11.8 57 57-125 48-104 (340)
104 3kru_A NADH:flavin oxidoreduct 62.2 80 0.0027 32.4 12.8 126 56-191 130-282 (343)
105 3h5l_A Putative branched-chain 62.2 69 0.0024 32.2 12.3 86 75-192 163-252 (419)
106 1ep3_A Dihydroorotate dehydrog 61.8 8.4 0.00029 38.1 5.2 141 16-181 124-288 (311)
107 1ydn_A Hydroxymethylglutaryl-C 61.8 1.3E+02 0.0043 29.7 14.1 98 59-186 23-135 (295)
108 1ps9_A 2,4-dienoyl-COA reducta 61.5 66 0.0023 35.4 12.9 156 37-205 85-298 (671)
109 3gr7_A NADPH dehydrogenase; fl 61.4 59 0.002 33.2 11.6 120 56-191 131-282 (340)
110 2yxg_A DHDPS, dihydrodipicolin 61.3 1.3E+02 0.0045 29.7 15.6 128 58-221 17-150 (289)
111 2wkj_A N-acetylneuraminate lya 61.1 1.4E+02 0.0047 29.9 15.1 128 59-222 29-163 (303)
112 3oix_A Putative dihydroorotate 60.4 32 0.0011 35.5 9.4 128 33-181 179-323 (345)
113 1yad_A Regulatory protein TENI 59.6 1.1E+02 0.0039 28.4 12.7 146 46-219 41-197 (221)
114 1u83_A Phosphosulfolactate syn 58.7 58 0.002 32.9 10.6 123 17-165 65-192 (276)
115 1thf_D HISF protein; thermophI 58.6 88 0.003 29.6 11.7 172 12-218 38-228 (253)
116 3tty_A Beta-GAL, beta-galactos 58.5 36 0.0012 38.1 10.1 110 117-256 8-147 (675)
117 1usg_A Leucine-specific bindin 58.4 66 0.0023 31.0 11.0 41 146-191 184-224 (346)
118 1rd5_A Tryptophan synthase alp 58.3 1.3E+02 0.0046 28.9 17.3 176 28-248 75-259 (262)
119 1nvm_A HOA, 4-hydroxy-2-oxoval 58.3 63 0.0022 32.9 11.2 104 8-124 97-201 (345)
120 3l5l_A Xenobiotic reductase A; 58.1 38 0.0013 34.9 9.6 125 55-191 144-300 (363)
121 3ks9_A Mglur1, metabotropic gl 58.0 1.4E+02 0.0046 31.5 14.1 130 28-187 134-283 (496)
122 1ujp_A Tryptophan synthase alp 57.4 86 0.0029 31.1 11.7 138 48-207 16-165 (271)
123 1t57_A Conserved protein MTH16 57.2 1.1E+02 0.0036 29.7 11.6 134 51-250 25-160 (206)
124 1xi3_A Thiamine phosphate pyro 57.1 95 0.0033 28.4 11.4 64 153-219 123-195 (215)
125 4dpp_A DHDPS 2, dihydrodipicol 57.1 1.8E+02 0.0063 30.1 14.8 158 27-224 43-210 (360)
126 3q58_A N-acetylmannosamine-6-p 56.8 60 0.0021 31.3 10.2 143 35-218 57-214 (229)
127 3h5d_A DHDPS, dihydrodipicolin 56.6 1.7E+02 0.0057 29.4 15.9 130 59-224 25-161 (311)
128 1xm3_A Thiazole biosynthesis p 56.4 1.1E+02 0.0037 29.9 12.2 137 46-219 64-212 (264)
129 4fo4_A Inosine 5'-monophosphat 56.2 61 0.0021 33.7 10.7 29 245-273 290-318 (366)
130 3igs_A N-acetylmannosamine-6-p 55.7 89 0.003 30.1 11.2 143 35-218 57-214 (232)
131 2fli_A Ribulose-phosphate 3-ep 55.7 53 0.0018 30.5 9.4 167 10-219 22-203 (220)
132 4fo4_A Inosine 5'-monophosphat 54.7 62 0.0021 33.6 10.5 56 148-205 110-166 (366)
133 3hgj_A Chromate reductase; TIM 54.6 1.1E+02 0.0037 31.2 12.3 132 24-180 191-335 (349)
134 1ydn_A Hydroxymethylglutaryl-C 54.0 1E+02 0.0034 30.5 11.6 132 6-165 81-231 (295)
135 2vc6_A MOSA, dihydrodipicolina 54.0 1.7E+02 0.006 28.9 14.5 111 58-193 17-133 (292)
136 3f4w_A Putative hexulose 6 pho 53.6 95 0.0033 28.5 10.8 46 151-198 70-115 (211)
137 4eyg_A Twin-arginine transloca 53.5 58 0.002 31.8 9.7 146 11-191 65-228 (368)
138 3gr7_A NADPH dehydrogenase; fl 52.2 1.1E+02 0.0038 31.1 11.8 131 24-180 183-324 (340)
139 3kdn_A Rubisco, ribulose bisph 52.1 27 0.00093 37.5 7.4 149 11-182 178-339 (444)
140 3b8i_A PA4872 oxaloacetate dec 50.4 2.1E+02 0.0072 28.7 18.2 168 33-219 68-239 (287)
141 3d0c_A Dihydrodipicolinate syn 50.4 2.1E+02 0.0071 28.7 16.2 124 59-223 30-159 (314)
142 3inp_A D-ribulose-phosphate 3- 49.5 1.6E+02 0.0055 28.8 12.0 151 11-203 47-213 (246)
143 2qdd_A Mandelate racemase/muco 49.1 59 0.002 33.3 9.2 145 59-252 144-290 (378)
144 2tps_A Protein (thiamin phosph 48.9 1.1E+02 0.0039 28.2 10.6 65 152-219 130-205 (227)
145 3dz1_A Dihydrodipicolinate syn 48.8 2.2E+02 0.0075 28.5 13.3 129 59-222 26-159 (313)
146 3rcy_A Mandelate racemase/muco 48.8 1.2E+02 0.0042 31.9 11.8 154 59-250 145-305 (433)
147 1vzw_A Phosphoribosyl isomeras 48.1 1.8E+02 0.0062 27.3 12.9 169 11-218 39-226 (244)
148 1ydo_A HMG-COA lyase; TIM-barr 47.9 1.5E+02 0.0051 29.8 11.8 180 7-222 84-297 (307)
149 1mzh_A Deoxyribose-phosphate a 47.8 1.4E+02 0.0047 28.5 11.1 121 13-166 79-205 (225)
150 3ffs_A Inosine-5-monophosphate 47.6 67 0.0023 33.9 9.5 91 66-194 147-256 (400)
151 1eix_A Orotidine 5'-monophosph 47.5 77 0.0026 30.6 9.4 51 149-199 83-133 (245)
152 2fli_A Ribulose-phosphate 3-ep 47.1 86 0.0029 29.0 9.3 116 50-200 6-123 (220)
153 3l5l_A Xenobiotic reductase A; 47.0 63 0.0022 33.2 9.1 132 24-180 197-342 (363)
154 3e96_A Dihydrodipicolinate syn 47.0 2.3E+02 0.008 28.3 15.2 107 59-191 30-142 (316)
155 1qwg_A PSL synthase;, (2R)-pho 46.7 48 0.0017 33.0 7.7 127 16-165 37-168 (251)
156 2y1h_A Putative deoxyribonucle 46.7 32 0.0011 33.0 6.4 63 50-128 9-71 (272)
157 3i45_A Twin-arginine transloca 46.0 1.2E+02 0.004 30.0 10.7 97 62-190 128-231 (387)
158 1gte_A Dihydropyrimidine dehyd 45.7 73 0.0025 37.3 10.3 127 33-182 689-836 (1025)
159 1i60_A IOLI protein; beta barr 45.5 72 0.0025 29.9 8.6 49 37-87 50-109 (278)
160 4fxs_A Inosine-5'-monophosphat 45.4 1.1E+02 0.0039 32.8 11.1 94 66-194 234-344 (496)
161 1y0e_A Putative N-acetylmannos 45.2 1.9E+02 0.0064 26.7 12.4 105 67-205 80-193 (223)
162 1dp4_A Atrial natriuretic pept 45.2 2.3E+02 0.0077 28.4 12.9 126 31-187 86-233 (435)
163 3b0p_A TRNA-dihydrouridine syn 45.0 2.6E+02 0.009 28.3 14.5 146 46-207 56-217 (350)
164 3usb_A Inosine-5'-monophosphat 44.4 1.4E+02 0.0048 32.2 11.7 116 63-206 194-315 (511)
165 1nvm_A HOA, 4-hydroxy-2-oxoval 44.4 1.2E+02 0.0042 30.8 10.7 113 57-193 25-140 (345)
166 1rqb_A Transcarboxylase 5S sub 44.0 3.2E+02 0.011 29.9 14.4 128 11-167 124-254 (539)
167 3cjp_A Predicted amidohydrolas 43.6 1.4E+02 0.0049 28.2 10.6 109 65-190 16-148 (272)
168 3rr1_A GALD, putative D-galact 43.5 1E+02 0.0034 32.2 10.0 156 55-250 120-280 (405)
169 4e4u_A Mandalate racemase/muco 43.3 1.1E+02 0.0037 32.0 10.3 157 59-251 143-304 (412)
170 1tkk_A Similar to chloromucona 43.2 2.6E+02 0.009 28.1 13.0 147 60-252 140-291 (366)
171 1nu5_A Chloromuconate cycloiso 42.7 2.1E+02 0.0073 28.8 12.2 146 60-252 142-292 (370)
172 1y0e_A Putative N-acetylmannos 42.5 2.1E+02 0.0071 26.4 11.3 109 60-204 21-134 (223)
173 3ovp_A Ribulose-phosphate 3-ep 42.3 1E+02 0.0035 29.7 9.2 118 59-205 14-131 (228)
174 4gnr_A ABC transporter substra 42.1 2.5E+02 0.0084 27.2 15.1 74 102-193 156-229 (353)
175 1j6o_A TATD-related deoxyribon 41.9 18 0.0006 35.1 3.7 113 48-190 14-137 (268)
176 2ox4_A Putative mandelate race 41.8 1.3E+02 0.0044 31.0 10.5 155 60-250 146-311 (403)
177 2ovl_A Putative racemase; stru 41.8 2.4E+02 0.008 28.6 12.4 145 60-252 146-295 (371)
178 4b4k_A N5-carboxyaminoimidazol 41.6 47 0.0016 31.6 6.4 58 29-86 30-88 (181)
179 3dx5_A Uncharacterized protein 41.6 40 0.0014 32.2 6.2 49 40-88 54-110 (286)
180 3ctl_A D-allulose-6-phosphate 41.5 87 0.003 30.3 8.6 122 11-170 74-202 (231)
181 2pcq_A Putative dihydrodipicol 41.4 69 0.0023 31.8 8.0 124 59-223 16-144 (283)
182 1kwg_A Beta-galactosidase; TIM 41.3 95 0.0033 34.2 9.9 59 120-193 2-71 (645)
183 3obe_A Sugar phosphate isomera 40.9 89 0.003 30.7 8.8 24 62-85 36-59 (305)
184 3irs_A Uncharacterized protein 40.9 87 0.003 30.6 8.7 106 63-193 48-160 (291)
185 4grd_A N5-CAIR mutase, phospho 40.9 54 0.0018 30.9 6.6 58 29-86 20-78 (173)
186 2ftp_A Hydroxymethylglutaryl-C 40.6 2.8E+02 0.0096 27.4 12.7 178 7-220 86-297 (302)
187 3dxi_A Putative aldolase; TIM 40.1 1.4E+02 0.0047 30.4 10.2 116 56-194 18-135 (320)
188 4f11_A Gamma-aminobutyric acid 40.1 2.8E+02 0.0097 27.7 12.7 88 66-187 144-233 (433)
189 1rvk_A Isomerase/lactonizing e 40.0 3.1E+02 0.011 27.7 13.2 151 59-251 148-304 (382)
190 1zzm_A Putative deoxyribonucle 40.0 53 0.0018 31.1 6.7 23 63-85 20-42 (259)
191 1pea_A Amidase operon; gene re 39.9 1.5E+02 0.005 29.4 10.3 33 157-191 196-231 (385)
192 3igs_A N-acetylmannosamine-6-p 39.7 2.4E+02 0.0081 27.0 11.4 115 53-205 21-145 (232)
193 4i6k_A Amidohydrolase family p 39.1 69 0.0024 31.3 7.6 97 62-191 53-155 (294)
194 1jdp_A NPR-C, atrial natriuret 39.1 2.7E+02 0.0091 28.1 12.3 130 30-188 92-239 (441)
195 2e4u_A Metabotropic glutamate 39.0 3.7E+02 0.013 28.4 14.0 131 30-190 125-274 (555)
196 2o56_A Putative mandelate race 38.7 1.9E+02 0.0066 29.7 11.3 155 60-250 152-317 (407)
197 2rdx_A Mandelate racemase/muco 38.5 1E+02 0.0034 31.5 9.0 144 59-252 144-290 (379)
198 2qjg_A Putative aldolase MJ040 38.4 2.2E+02 0.0074 27.3 11.0 128 66-219 103-242 (273)
199 3cc1_A BH1870 protein, putativ 38.2 2.4E+02 0.0082 29.6 12.1 124 58-193 25-217 (433)
200 2nv1_A Pyridoxal biosynthesis 38.1 1.5E+02 0.0051 29.4 10.0 63 12-80 36-105 (305)
201 1vrd_A Inosine-5'-monophosphat 37.9 2.6E+02 0.009 29.5 12.5 69 63-164 237-305 (494)
202 4do7_A Amidohydrolase 2; enzym 37.6 58 0.002 32.0 6.8 99 65-195 37-144 (303)
203 3sm9_A Mglur3, metabotropic gl 37.5 3.7E+02 0.013 27.9 13.7 129 28-186 122-269 (479)
204 3gtx_A Organophosphorus hydrol 37.5 19 0.00066 36.9 3.3 54 61-127 62-115 (339)
205 3lp6_A Phosphoribosylaminoimid 37.4 76 0.0026 29.9 7.1 58 29-86 15-73 (174)
206 2w6r_A Imidazole glycerol phos 37.2 1.6E+02 0.0054 28.1 9.8 67 11-83 37-104 (266)
207 3trh_A Phosphoribosylaminoimid 37.0 69 0.0024 30.1 6.7 58 29-86 14-72 (169)
208 2og9_A Mandelate racemase/muco 36.4 2.2E+02 0.0074 29.3 11.2 144 60-251 162-310 (393)
209 1mdl_A Mandelate racemase; iso 36.4 2.4E+02 0.0081 28.4 11.3 147 60-251 144-292 (359)
210 1f76_A Dihydroorotate dehydrog 36.4 1.9E+02 0.0066 28.8 10.6 75 146-257 153-245 (336)
211 2q02_A Putative cytoplasmic pr 36.1 1.9E+02 0.0066 26.9 10.0 102 63-186 20-135 (272)
212 4e5t_A Mandelate racemase / mu 35.9 1.6E+02 0.0055 30.5 10.2 156 60-251 151-311 (404)
213 3qja_A IGPS, indole-3-glycerol 35.9 2.1E+02 0.0072 28.3 10.6 126 35-208 101-234 (272)
214 3ngf_A AP endonuclease, family 35.8 96 0.0033 29.4 7.9 65 15-84 34-115 (269)
215 3l5a_A NADH/flavin oxidoreduct 35.6 73 0.0025 33.7 7.5 97 56-163 157-283 (419)
216 3nav_A Tryptophan synthase alp 35.6 3.4E+02 0.012 26.9 13.9 142 47-208 19-172 (271)
217 3usb_A Inosine-5'-monophosphat 35.5 2.1E+02 0.0072 30.8 11.3 94 66-194 259-369 (511)
218 2gl5_A Putative dehydratase pr 35.2 3.8E+02 0.013 27.4 14.3 154 60-250 150-320 (410)
219 2oz8_A MLL7089 protein; struct 35.2 3.8E+02 0.013 27.3 15.1 139 60-251 145-291 (389)
220 2hjp_A Phosphonopyruvate hydro 35.0 3.6E+02 0.012 27.0 20.8 188 33-250 61-257 (290)
221 3eoo_A Methylisocitrate lyase; 34.8 3.7E+02 0.013 27.1 18.3 185 33-250 69-261 (298)
222 3go2_A Putative L-alanine-DL-g 34.4 1.5E+02 0.0051 30.8 9.6 155 60-252 143-314 (409)
223 2nql_A AGR_PAT_674P, isomerase 34.4 2.6E+02 0.0089 28.5 11.4 145 59-251 163-310 (388)
224 1tqj_A Ribulose-phosphate 3-ep 33.6 1.6E+02 0.0055 28.1 9.0 105 49-185 6-113 (230)
225 3kuu_A Phosphoribosylaminoimid 33.6 70 0.0024 30.2 6.2 73 10-86 5-78 (174)
226 2pgw_A Muconate cycloisomerase 33.5 3.5E+02 0.012 27.5 12.2 146 59-252 146-294 (384)
227 2dvt_A Thermophilic reversible 33.4 1.3E+02 0.0044 29.1 8.5 106 65-192 41-166 (327)
228 1vs1_A 3-deoxy-7-phosphoheptul 33.2 3.7E+02 0.012 26.7 11.8 126 35-183 134-273 (276)
229 4e7p_A Response regulator; DNA 33.1 1.9E+02 0.0066 24.0 8.7 61 102-183 80-140 (150)
230 3rcm_A TATD family hydrolase; 33.0 1.2E+02 0.0042 30.0 8.4 37 49-86 5-41 (287)
231 3lye_A Oxaloacetate acetyl hyd 32.9 4E+02 0.014 27.0 17.6 188 35-253 74-272 (307)
232 3o07_A Pyridoxine biosynthesis 32.9 3.8E+02 0.013 27.1 11.8 47 27-79 48-94 (291)
233 3ajx_A 3-hexulose-6-phosphate 32.8 2.8E+02 0.0097 25.1 11.5 100 54-186 5-105 (207)
234 1yix_A Deoxyribonuclease YCFH; 32.3 19 0.00064 34.2 2.1 114 49-190 5-128 (265)
235 1xwy_A DNAse TATD, deoxyribonu 32.3 1E+02 0.0035 29.1 7.4 36 49-85 7-42 (264)
236 1vr6_A Phospho-2-dehydro-3-deo 32.1 1.9E+02 0.0067 29.9 9.9 125 35-182 202-340 (350)
237 3stp_A Galactonate dehydratase 31.9 2.5E+02 0.0086 29.3 10.9 150 59-250 178-332 (412)
238 3inp_A D-ribulose-phosphate 3- 31.8 2.4E+02 0.0083 27.5 10.1 115 59-203 37-151 (246)
239 3kto_A Response regulator rece 31.6 2.1E+02 0.0073 23.3 8.8 61 102-183 66-126 (136)
240 2hxt_A L-fuconate dehydratase; 31.4 3.8E+02 0.013 27.9 12.3 156 59-262 197-358 (441)
241 1pfk_A Phosphofructokinase; tr 31.4 4.3E+02 0.015 26.8 12.7 113 55-186 71-215 (320)
242 1qo2_A Molecule: N-((5-phospho 31.4 2.7E+02 0.0091 26.2 10.2 170 11-219 37-228 (241)
243 1ep3_A Dihydroorotate dehydrog 31.4 45 0.0016 32.7 4.8 49 146-195 111-173 (311)
244 3tva_A Xylose isomerase domain 31.4 1.1E+02 0.0037 29.2 7.4 74 14-87 31-127 (290)
245 2p8b_A Mandelate racemase/muco 31.2 2.6E+02 0.0089 28.2 10.7 146 60-252 141-290 (369)
246 2nx9_A Oxaloacetate decarboxyl 31.1 3.1E+02 0.011 29.4 11.6 96 37-164 131-232 (464)
247 3p6l_A Sugar phosphate isomera 31.1 85 0.0029 29.5 6.6 48 35-83 65-112 (262)
248 2gou_A Oxidoreductase, FMN-bin 31.0 2.4E+02 0.0083 28.9 10.4 122 24-177 200-336 (365)
249 3q58_A N-acetylmannosamine-6-p 31.0 3E+02 0.01 26.3 10.5 115 53-205 21-145 (229)
250 3ors_A N5-carboxyaminoimidazol 30.9 83 0.0029 29.4 6.1 58 29-86 11-69 (163)
251 3rhg_A Putative phophotriester 30.9 2.3E+02 0.0078 29.2 10.2 111 59-192 72-199 (365)
252 1xmp_A PURE, phosphoribosylami 30.7 82 0.0028 29.6 6.1 58 29-86 19-77 (170)
253 1ass_A Thermosome; chaperonin, 30.7 56 0.0019 29.8 5.0 58 147-216 57-120 (159)
254 3v5c_A Mandelate racemase/muco 30.7 2.5E+02 0.0085 29.0 10.5 153 62-250 150-305 (392)
255 1u11_A PURE (N5-carboxyaminoim 30.7 82 0.0028 29.9 6.1 51 36-86 37-87 (182)
256 1tzz_A Hypothetical protein L1 30.6 1.7E+02 0.0059 30.0 9.3 145 60-252 165-318 (392)
257 3nl6_A Thiamine biosynthetic b 30.5 5.6E+02 0.019 27.8 16.0 169 21-218 13-213 (540)
258 2y88_A Phosphoribosyl isomeras 30.5 1.4E+02 0.005 27.9 8.1 63 12-83 39-104 (244)
259 1zlp_A PSR132, petal death pro 30.4 4.5E+02 0.015 26.7 16.4 185 33-250 86-279 (318)
260 3eod_A Protein HNR; response r 30.4 1.5E+02 0.0051 23.9 7.3 59 103-181 66-124 (130)
261 4af0_A Inosine-5'-monophosphat 30.4 1.1E+02 0.0037 33.8 7.8 59 146-206 281-340 (556)
262 1mkz_A Molybdenum cofactor bio 30.4 1.9E+02 0.0066 26.3 8.6 69 15-87 10-80 (172)
263 1kbi_A Cytochrome B2, L-LCR; f 30.3 1.5E+02 0.0051 32.1 9.0 139 58-221 256-439 (511)
264 2vm8_A Dihydropyrimidinase-rel 30.1 4.7E+02 0.016 26.9 13.6 170 60-268 96-275 (501)
265 2wqp_A Polysialic acid capsule 29.6 2.1E+02 0.0071 29.7 9.5 96 35-162 137-233 (349)
266 3oow_A Phosphoribosylaminoimid 29.6 92 0.0032 29.2 6.2 58 29-86 13-71 (166)
267 3hdg_A Uncharacterized protein 29.1 1.9E+02 0.0064 23.5 7.7 59 103-182 66-124 (137)
268 3ovp_A Ribulose-phosphate 3-ep 29.1 3.6E+02 0.012 25.7 10.7 150 11-203 24-187 (228)
269 4avf_A Inosine-5'-monophosphat 29.1 2.6E+02 0.0088 29.9 10.6 94 66-194 232-342 (490)
270 3fv9_G Mandelate racemase/muco 29.0 3.1E+02 0.011 28.1 10.9 152 58-252 143-296 (386)
271 3jva_A Dipeptide epimerase; en 28.9 3.7E+02 0.013 27.1 11.3 146 59-252 138-287 (354)
272 1o4v_A Phosphoribosylaminoimid 28.9 87 0.003 29.8 6.0 58 29-86 21-79 (183)
273 4f06_A Extracellular ligand-bi 28.9 3.4E+02 0.012 26.6 11.0 97 63-187 126-222 (371)
274 2ftp_A Hydroxymethylglutaryl-C 28.7 4.3E+02 0.015 26.0 17.0 156 57-273 25-198 (302)
275 2a5h_A L-lysine 2,3-aminomutas 28.3 2.2E+02 0.0077 29.6 9.7 47 57-112 143-190 (416)
276 3kws_A Putative sugar isomeras 28.2 2E+02 0.0067 27.3 8.7 158 30-210 4-189 (287)
277 2h9a_A Carbon monoxide dehydro 28.2 5E+02 0.017 27.6 12.5 130 37-198 191-329 (445)
278 2hbv_A 2-amino-3-carboxymucona 28.1 95 0.0032 30.7 6.6 110 63-193 59-180 (334)
279 1kcz_A Beta-methylaspartase; b 28.1 1.2E+02 0.0041 31.6 7.6 95 103-207 218-321 (413)
280 1vcv_A Probable deoxyribose-ph 28.0 63 0.0022 31.4 5.1 52 154-207 137-204 (226)
281 3kht_A Response regulator; PSI 28.0 2.1E+02 0.0071 23.5 7.9 60 102-181 65-126 (144)
282 3e05_A Precorrin-6Y C5,15-meth 27.9 2.2E+02 0.0074 25.5 8.5 96 52-185 65-160 (204)
283 1uas_A Alpha-galactosidase; TI 27.6 4.9E+02 0.017 26.3 15.1 116 58-187 22-157 (362)
284 2nli_A Lactate oxidase; flavoe 27.6 4.3E+02 0.015 27.1 11.7 137 59-221 143-320 (368)
285 3o21_A Glutamate receptor 3; p 27.5 4.7E+02 0.016 26.0 14.7 40 147-188 173-213 (389)
286 1k77_A EC1530, hypothetical pr 27.4 94 0.0032 29.0 6.1 67 16-87 27-110 (260)
287 2yxt_A Pyridoxal kinase; beta 27.1 3.6E+02 0.012 26.1 10.6 45 146-190 60-111 (312)
288 3gaa_A Uncharacterized protein 27.1 3.5E+02 0.012 26.2 10.4 169 32-216 38-217 (252)
289 2a4a_A Deoxyribose-phosphate a 26.9 53 0.0018 33.2 4.4 54 151-206 178-244 (281)
290 2gwg_A 4-oxalomesaconate hydra 26.8 2E+02 0.007 28.4 8.8 111 66-192 53-180 (350)
291 3tr9_A Dihydropteroate synthas 26.7 3.3E+02 0.011 27.8 10.3 22 235-256 175-198 (314)
292 3hm2_A Precorrin-6Y C5,15-meth 26.7 1.6E+02 0.0055 25.3 7.2 97 51-186 49-146 (178)
293 4es1_A BH0342 protein; ferredo 26.4 99 0.0034 26.4 5.4 52 437-497 38-94 (100)
294 2hzg_A Mandelate racemase/muco 26.3 3.3E+02 0.011 27.9 10.5 152 59-252 144-300 (401)
295 2b9e_A NOL1/NOP2/SUN domain fa 26.1 65 0.0022 32.4 4.9 60 19-88 105-164 (309)
296 3nur_A Amidohydrolase; TIM bar 26.0 75 0.0026 32.5 5.5 110 63-195 74-197 (357)
297 3fa4_A 2,3-dimethylmalate lyas 26.0 5.2E+02 0.018 26.1 17.4 187 35-252 67-263 (302)
298 2wm1_A 2-amino-3-carboxymucona 26.0 1.1E+02 0.0038 30.0 6.6 114 63-193 55-177 (336)
299 2ps2_A Putative mandelate race 26.0 2.4E+02 0.0083 28.5 9.3 144 59-252 145-292 (371)
300 1h5y_A HISF; histidine biosynt 25.7 1.6E+02 0.0055 27.3 7.4 87 63-179 34-122 (253)
301 2zvi_A 2,3-diketo-5-methylthio 25.6 3.2E+02 0.011 29.1 10.3 160 11-198 176-348 (425)
302 3ble_A Citramalate synthase fr 25.6 5.2E+02 0.018 26.0 11.7 131 9-167 101-247 (337)
303 2yyu_A Orotidine 5'-phosphate 25.5 1.6E+02 0.0056 28.2 7.6 50 150-199 74-126 (246)
304 2pp0_A L-talarate/galactarate 25.3 4.8E+02 0.017 26.7 11.6 145 59-251 174-323 (398)
305 1zfj_A Inosine monophosphate d 25.3 5.5E+02 0.019 26.9 12.3 116 63-206 171-292 (491)
306 3mqt_A Mandelate racemase/muco 25.2 3.5E+02 0.012 27.8 10.4 112 63-206 155-271 (394)
307 3iix_A Biotin synthetase, puta 24.9 5E+02 0.017 25.4 11.4 96 144-251 86-192 (348)
308 1ub3_A Aldolase protein; schif 24.8 1.4E+02 0.0048 28.7 6.8 119 60-207 69-196 (220)
309 1l6s_A Porphobilinogen synthas 24.8 3.1E+02 0.011 28.2 9.5 209 60-277 56-289 (323)
310 2gdq_A YITF; mandelate racemas 24.7 3.8E+02 0.013 27.2 10.6 145 59-251 135-288 (382)
311 1gml_A T-complex protein 1 sub 24.7 72 0.0025 29.5 4.6 58 147-216 63-126 (178)
312 1p1x_A Deoxyribose-phosphate a 24.6 1E+02 0.0035 30.6 6.0 55 150-206 155-217 (260)
313 3jte_A Response regulator rece 24.6 2.9E+02 0.0098 22.5 9.1 58 103-181 64-121 (143)
314 3thd_A Beta-galactosidase; TIM 24.3 1.5E+02 0.0053 33.3 7.9 117 118-256 26-162 (654)
315 2d9b_A Gtfii-I, general transc 24.3 1.1E+02 0.0038 26.7 5.3 42 119-171 53-98 (109)
316 3og2_A Beta-galactosidase; TIM 24.1 1.4E+02 0.0046 35.4 7.6 118 118-256 41-177 (1003)
317 1l3i_A Precorrin-6Y methyltran 24.1 2.5E+02 0.0086 24.1 8.0 98 52-187 56-154 (192)
318 3cyj_A Mandelate racemase/muco 23.9 5.7E+02 0.019 25.8 12.2 146 60-251 144-292 (372)
319 3qc0_A Sugar isomerase; TIM ba 23.8 1.5E+02 0.0052 27.6 6.9 51 37-88 49-109 (275)
320 3k4h_A Putative transcriptiona 23.8 3.5E+02 0.012 25.1 9.4 16 173-188 204-219 (292)
321 3guw_A Uncharacterized protein 23.8 50 0.0017 32.4 3.5 118 49-191 4-128 (261)
322 1thf_D HISF protein; thermophI 23.7 1.6E+02 0.0054 27.8 7.0 94 64-187 153-248 (253)
323 2oem_A 2,3-diketo-5-methylthio 23.6 6.3E+02 0.022 26.6 12.1 150 11-183 162-323 (413)
324 4ab4_A Xenobiotic reductase B; 23.6 4.4E+02 0.015 27.0 10.8 103 54-163 138-260 (362)
325 3v3w_A Starvation sensing prot 23.6 6.1E+02 0.021 26.3 12.1 165 57-257 146-336 (424)
326 2gzx_A Putative TATD related D 23.5 1.8E+02 0.0061 27.1 7.3 35 50-85 5-39 (265)
327 2c6q_A GMP reductase 2; TIM ba 23.3 1.6E+02 0.0053 30.2 7.3 73 98-194 143-233 (351)
328 3ozy_A Putative mandelate race 23.2 6.1E+02 0.021 25.9 11.9 145 58-250 149-298 (389)
329 1dbt_A Orotidine 5'-phosphate 23.1 1.6E+02 0.0054 28.2 6.9 51 149-199 72-125 (239)
330 3tva_A Xylose isomerase domain 23.0 2.9E+02 0.01 26.1 8.8 22 62-83 21-42 (290)
331 2qgy_A Enolase from the enviro 22.9 5.7E+02 0.019 26.0 11.5 114 59-206 148-264 (391)
332 3b0p_A TRNA-dihydrouridine syn 22.8 6E+02 0.02 25.6 11.7 143 16-180 82-242 (350)
333 2yxd_A Probable cobalt-precorr 22.8 3.5E+02 0.012 23.0 9.4 97 51-189 57-153 (183)
334 3tji_A Mandelate racemase/muco 22.8 3.6E+02 0.012 28.1 10.1 161 58-252 152-326 (422)
335 1sjd_A N-acylamino acid racema 22.7 3.5E+02 0.012 27.2 9.8 144 60-252 141-286 (368)
336 4avf_A Inosine-5'-monophosphat 22.5 1.2E+02 0.004 32.6 6.3 58 146-205 229-287 (490)
337 1kko_A 3-methylaspartate ammon 22.5 1.2E+02 0.0042 31.5 6.4 92 105-206 220-320 (413)
338 1vrd_A Inosine-5'-monophosphat 22.4 2E+02 0.0067 30.5 8.1 57 148-206 239-296 (494)
339 3bo9_A Putative nitroalkan dio 22.3 4.3E+02 0.015 26.4 10.2 75 103-204 65-139 (326)
340 3f6c_A Positive transcription 22.3 3E+02 0.01 22.0 8.1 62 102-184 60-121 (134)
341 3m0m_A L-rhamnose isomerase; b 22.2 3.3E+02 0.011 29.0 9.6 111 143-273 77-204 (438)
342 3rg8_A Phosphoribosylaminoimid 22.2 1.9E+02 0.0064 26.8 6.8 58 29-86 10-69 (159)
343 3aty_A Tcoye, prostaglandin F2 22.1 2.1E+02 0.0072 29.6 8.0 103 53-163 157-284 (379)
344 1xg4_A Probable methylisocitra 21.9 6.1E+02 0.021 25.4 19.0 186 33-250 64-257 (295)
345 2jt1_A PEFI protein; solution 21.9 82 0.0028 25.5 3.8 36 357-412 22-57 (77)
346 2zad_A Muconate cycloisomerase 21.7 6E+02 0.02 25.2 12.8 145 60-252 139-287 (345)
347 2i2x_B MTAC, methyltransferase 21.6 3E+02 0.01 26.6 8.6 74 103-197 139-215 (258)
348 1zxx_A 6-phosphofructokinase; 21.5 6.4E+02 0.022 25.5 12.2 113 55-186 70-214 (319)
349 3lcm_A SMU.1420, putative oxid 21.3 1.3E+02 0.0043 27.8 5.6 67 8-75 111-185 (196)
350 1i1g_A Transcriptional regulat 21.2 1.7E+02 0.0058 24.9 6.1 60 393-465 32-91 (141)
351 3m4x_A NOL1/NOP2/SUN family pr 21.2 85 0.0029 33.5 4.9 57 20-86 109-165 (456)
352 3cu2_A Ribulose-5-phosphate 3- 21.0 2.1E+02 0.0072 27.7 7.3 131 12-181 87-233 (237)
353 1mzh_A Deoxyribose-phosphate a 20.9 4.2E+02 0.014 25.0 9.4 57 147-207 133-195 (225)
354 2vc7_A Aryldialkylphosphatase; 20.9 5.5E+02 0.019 24.5 11.1 53 63-128 48-100 (314)
355 3iwt_A 178AA long hypothetical 20.8 2E+02 0.0068 26.0 6.8 54 33-88 40-93 (178)
356 3oq2_A Crispr-associated prote 20.8 1.6E+02 0.0055 24.9 5.7 54 435-497 39-97 (103)
357 3ij6_A Uncharacterized metal-d 20.6 72 0.0025 31.7 4.0 112 63-194 42-165 (312)
358 1zpw_X Hypothetical protein TT 20.6 1.4E+02 0.0046 24.7 5.0 37 435-471 30-71 (90)
359 3om0_A Glutamate receptor, ion 20.5 6.1E+02 0.021 24.9 13.8 90 67-188 130-219 (393)
360 1gox_A (S)-2-hydroxy-acid oxid 20.5 6.8E+02 0.023 25.4 12.6 26 60-85 134-159 (370)
361 1eep_A Inosine 5'-monophosphat 20.4 4.6E+02 0.016 26.9 10.2 103 65-205 155-277 (404)
362 3duw_A OMT, O-methyltransferas 20.4 3E+02 0.01 24.8 8.0 101 52-183 84-197 (223)
363 3mkc_A Racemase; metabolic pro 20.3 6.5E+02 0.022 25.7 11.4 142 63-250 160-308 (394)
364 2e28_A Pyruvate kinase, PK; al 20.3 1.8E+02 0.0061 32.2 7.3 49 145-193 173-222 (587)
365 3eul_A Possible nitrate/nitrit 20.3 3.7E+02 0.013 22.2 9.3 61 103-184 76-136 (152)
366 2pju_A Propionate catabolism o 20.3 3.9E+02 0.013 25.6 9.0 69 102-192 91-160 (225)
367 3khj_A Inosine-5-monophosphate 20.3 3.8E+02 0.013 27.5 9.5 55 149-206 108-163 (361)
368 2h4a_A YRAM (HI1655); perplasm 20.3 3.2E+02 0.011 27.1 8.8 96 63-192 109-207 (325)
369 3sbf_A Mandelate racemase / mu 20.2 5.9E+02 0.02 26.1 11.0 162 57-252 130-305 (401)
370 2gjl_A Hypothetical protein PA 20.1 3.8E+02 0.013 26.6 9.2 79 103-204 55-133 (328)
371 2zqe_A MUTS2 protein; alpha/be 20.1 98 0.0034 25.2 4.0 33 53-85 6-42 (83)
No 1
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=100.00 E-value=2.9e-68 Score=548.42 Aligned_cols=252 Identities=32% Similarity=0.555 Sum_probs=236.0
Q ss_pred chhhccCCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 008423 9 GWTAWWPTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH 88 (566)
Q Consensus 9 ~~~~~~~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~ 88 (566)
..+++....|+|||||||+||+++++|+++|+.+++++|+++|+||||+++|+++|++.|.+++++||+||||||||||.
T Consensus 44 ~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~ 123 (304)
T 3fst_A 44 SIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPP 123 (304)
T ss_dssp HHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC-
T ss_pred HHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCC
Confidence 35677788999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC
Q 008423 89 GQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY 168 (566)
Q Consensus 89 ~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff 168 (566)
++ .++|.+|.|||++||+.. .|+||||+|||+||++.+.+ .|+++||+|++|||||||||+||
T Consensus 124 ~~------~~~~~~A~dLv~~ir~~~--~f~IgvA~yPE~Hp~a~~~~---------~d~~~Lk~KvdAGAdf~iTQ~ff 186 (304)
T 3fst_A 124 GS------GKPEMYASDLVTLLKEVA--DFDISVAAYPEVHPEAKSAQ---------ADLLNLKRKVDAGANRAITQFFF 186 (304)
T ss_dssp -----------CCCHHHHHHHHHHHC--CCEEEEEECTTCCTTCSCHH---------HHHHHHHHHHHHTCCEEEECCCS
T ss_pred CC------CCCCCCHHHHHHHHHHcC--CCeEEEEeCCCcCCCCCCHH---------HHHHHHHHHHHcCCCEEEeCccC
Confidence 64 257899999999999863 49999999999999987664 89999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008423 169 DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILA 248 (566)
Q Consensus 169 D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~ 248 (566)
|++.|.+|+++||++||++||+||||||+|++++.||+++||+.||++++++|+++++|+++++++|+++|++||++|++
T Consensus 187 D~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~~l~~~l~~~~dd~~~~~~~Gi~~a~e~~~~L~~ 266 (304)
T 3fst_A 187 DVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSR 266 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHHHHHHTCCCCHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHHHHcCCCcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEcCCchHHHHHHHHHcCCCcc
Q 008423 249 HGIKTLHLYTLNMEKSALAILLNLGLIEE 277 (566)
Q Consensus 249 ~Gv~GiHfyTlN~e~~v~~IL~~l~l~~~ 277 (566)
.|++||||||||+++.+.+|+++||+.+.
T Consensus 267 ~gv~GiH~yt~n~~~~~~~I~~~lg~~~~ 295 (304)
T 3fst_A 267 EGVKDFHFYTLNRAEMSYAICHTLGVRPG 295 (304)
T ss_dssp TTCCEEEEECTTCCHHHHHHHHHTTCCC-
T ss_pred CCCCEEEECCCCCHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999999774
No 2
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=100.00 E-value=7.5e-68 Score=546.69 Aligned_cols=258 Identities=34% Similarity=0.612 Sum_probs=242.0
Q ss_pred hhhccCCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 008423 10 WTAWWPTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHG 89 (566)
Q Consensus 10 ~~~~~~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~ 89 (566)
..++....|+|||||||++|++++.|+++|..++ ++|+++|+||||+++|+++|++.|.+++++||+||||||||||.+
T Consensus 35 ~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~-~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~ 113 (310)
T 3apt_A 35 LEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQ-SLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRG 113 (310)
T ss_dssp HHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHH-HTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTT
T ss_pred HHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHH-HhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCC
Confidence 3456667899999999999999999999999999 799999999999999999999999999999999999999999987
Q ss_pred CCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCC
Q 008423 90 QDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYD 169 (566)
Q Consensus 90 ~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD 169 (566)
...|.+.+++|++|.+||++||+.+|++|+||||+|||+||++.+.+ .|+++|++|++|||||||||+|||
T Consensus 114 ~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~---------~d~~~Lk~Kv~aGAdf~iTQ~ffD 184 (310)
T 3apt_A 114 ERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLE---------ADLRHFKAKVEAGLDFAITQLFFN 184 (310)
T ss_dssp CCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHH---------HHHHHHHHHHHHHCSEEEECCCSC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHH---------HHHHHHHHHHHcCCCEEEecccCC
Confidence 33444444459999999999999878779999999999999987654 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHc
Q 008423 170 TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAH 249 (566)
Q Consensus 170 ~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~ 249 (566)
++.|.+|+++||++||++||+||||||+|++++.+|+++||+.||++++++|+++++|+++++++|++++++||++|++.
T Consensus 185 ~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~~l~~~l~~~~~d~~~~~~~gi~~a~e~~~~L~~~ 264 (310)
T 3apt_A 185 NAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTEVCGASIPGPLLAKLERHQDDPKAVLEIGVEHAVRQVAELLEA 264 (310)
T ss_dssp HHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHHTSCCCCCHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHHcCCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred CCCeEEEEcCCchHHHHHHHHHcCCCcc
Q 008423 250 GIKTLHLYTLNMEKSALAILLNLGLIEE 277 (566)
Q Consensus 250 Gv~GiHfyTlN~e~~v~~IL~~l~l~~~ 277 (566)
|++|+||||||+++.+.+|++++|+.+.
T Consensus 265 gv~GiH~yt~n~~~~~~~I~~~l~~~~~ 292 (310)
T 3apt_A 265 GVEGVHFYTLNKSPATRMVLERLGLRPA 292 (310)
T ss_dssp TCSEEEEECCSSCCHHHHHHHHTTSSCC
T ss_pred CCCeEEEeCCCCHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999765
No 3
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=100.00 E-value=1.5e-50 Score=417.72 Aligned_cols=217 Identities=12% Similarity=0.152 Sum_probs=184.2
Q ss_pred hhhccCCCcCEEEecCCC-CCCCc---hhH---------HHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCC
Q 008423 10 WTAWWPTTRHSATSRWGA-GGSTA---DLT---------LDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGI 76 (566)
Q Consensus 10 ~~~~~~~~p~fVsVTwga-gG~~~---~~S---------l~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GI 76 (566)
..++-...|||+ ||+|+ ||+++ ++| ..++..+++++|+++++||||.++++++|+++|.+++++||
T Consensus 40 l~~l~~l~pdf~-v~Yga~g~s~r~~~~rt~~f~~T~d~~~~~~~i~~~~gi~~v~Hltc~~~t~~ei~~~L~~~~~~GI 118 (315)
T 3ijd_A 40 IERISGLDIDGL-VIYDLQDEKERVSEERPFPFIETIDPQIYSENYLKDLKIPKIIYRCVGKYTPDEFRRLTRPVSGQDA 118 (315)
T ss_dssp HHHHHTSCCSEE-EECCCC-------------CCCBCCHHHHHHHHCTTSCSCEEEEEEGGGSCHHHHHHHHSCCTTCCC
T ss_pred HHHHHhCCCCEE-EECCCCCCCCCCCCCCCccccccccHHHHHHHHHHHhCCCceeeeeeCCCCHHHHHHHHHHHHHcCC
Confidence 346678899998 78996 66543 343 44788899999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHH
Q 008423 77 QNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVD 156 (566)
Q Consensus 77 rNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd 156 (566)
+||| |||||.+.. ..++|.||.+|++ +++++||||||+|||+|++ .+ .|+++||+|++
T Consensus 119 ~niL--RGDpp~~~~----~~~~~~~A~~l~~----~~~~~F~IGvA~yPe~H~~---~~---------~d~~~Lk~Kvd 176 (315)
T 3ijd_A 119 FSVF--VGAASRNQS----VLLKLSDAYKIRQ----DVNPDLLLGGVAIPERHMK---NT---------DEHLRIIDKIN 176 (315)
T ss_dssp EEEE--ECCCC--------CCSCHHHHHHHHH----HHCTTSEEEEEECGGGHHH---HS---------CHHHHHHHHHH
T ss_pred cEEe--cCCCCCCCC----CCcCHHHHHHHHH----hcCCCEEEEEEECCCCCCC---HH---------HHHHHHHHHHH
Confidence 9986 999998642 3568999999853 4566899999999999942 23 68999999999
Q ss_pred cCCcEEEeccCCCHHHHHHHH----HHHHHcCC-CCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHH
Q 008423 157 AGADLIITQLFYDTDMFLKFV----NDCRQIGI-TCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAV 231 (566)
Q Consensus 157 AGAdFiITQlffD~d~f~~f~----~~~R~~Gi-~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~v 231 (566)
|||||+|||+|||++.|.+|+ ++||++|+ ++|||||||||+|++++.++. +||+.||++++++|+.++| +
T Consensus 177 AGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~~-~~G~~IP~~l~~~l~~~~d----~ 251 (315)
T 3ijd_A 177 KGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMK-WLGISIPRWLENDLMNCED----I 251 (315)
T ss_dssp TTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHHH-HHTCCCCHHHHHHHHTTCC----C
T ss_pred CCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHHh-cCCCCCCHHHHHHHHhCCC----H
Confidence 999999999999999999999 78999999 999999999999999998776 9999999999999999875 5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEE
Q 008423 232 KAYGIHLGAEMCKKILAHGIKTLH 255 (566)
Q Consensus 232 k~~Gv~la~e~i~~L~~~Gv~GiH 255 (566)
+++|+++|++||++|++. ++|+|
T Consensus 252 ~~~Gi~~a~e~~~~L~~~-~~g~~ 274 (315)
T 3ijd_A 252 LNKSVSLSKSIFNELMEF-CLEKG 274 (315)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHHT
T ss_pred HHHHHHHHHHHHHHHHHh-cCcCC
Confidence 889999999999999987 66666
No 4
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.51 E-value=0.031 Score=55.36 Aligned_cols=101 Identities=19% Similarity=0.239 Sum_probs=71.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
..+.+......+.+.+.|++-|=+ |=..| .+.++|+.|++.+++ .+||+..-.
T Consensus 42 ~~~~~~a~~~a~al~~gGi~~iEv-t~~t~--------------~a~e~I~~l~~~~~~-~~iGaGTVl----------- 94 (232)
T 4e38_A 42 IDNAEDIIPLGKVLAENGLPAAEI-TFRSD--------------AAVEAIRLLRQAQPE-MLIGAGTIL----------- 94 (232)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEE-ETTST--------------THHHHHHHHHHHCTT-CEEEEECCC-----------
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEE-eCCCC--------------CHHHHHHHHHHhCCC-CEEeECCcC-----------
Confidence 445567778888888999986653 21111 378999999998874 788865421
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
..+..+.=++|||+||+|- .+|.+.. +.|++.| +|++||++ |...+.+
T Consensus 95 ---------t~~~a~~Ai~AGA~fIvsP-~~~~~vi----~~~~~~g--i~~ipGv~---TptEi~~ 142 (232)
T 4e38_A 95 ---------NGEQALAAKEAGATFVVSP-GFNPNTV----RACQEIG--IDIVPGVN---NPSTVEA 142 (232)
T ss_dssp ---------SHHHHHHHHHHTCSEEECS-SCCHHHH----HHHHHHT--CEEECEEC---SHHHHHH
T ss_pred ---------CHHHHHHHHHcCCCEEEeC-CCCHHHH----HHHHHcC--CCEEcCCC---CHHHHHH
Confidence 2455777788999999995 5777664 4577776 89999987 5554443
No 5
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.34 E-value=0.023 Score=55.78 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=72.7
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
.+++=+ |..+.++.....+.+.+.|++.|=+ +-.. ..+.+.|+.|++.+++ ..||+...=
T Consensus 14 ~vi~Vi--r~~~~~~a~~~a~al~~gGi~~iEv-t~~t--------------~~a~~~I~~l~~~~p~-~~IGAGTVl-- 73 (217)
T 3lab_A 14 PLIPVI--VIDDLVHAIPMAKALVAGGVHLLEV-TLRT--------------EAGLAAISAIKKAVPE-AIVGAGTVC-- 73 (217)
T ss_dssp SEEEEE--CCSCGGGHHHHHHHHHHTTCCEEEE-ETTS--------------TTHHHHHHHHHHHCTT-SEEEEECCC--
T ss_pred CEEEEE--EcCCHHHHHHHHHHHHHcCCCEEEE-eCCC--------------ccHHHHHHHHHHHCCC-CeEeecccc--
Confidence 444443 3456677777888889999996653 2111 1488999999999975 788875321
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCC------cEEeeecccC
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITC------PIVPGIMPIN 197 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~v------PIIpGImPI~ 197 (566)
+.+..++=++|||+||+| +.++.+.+ +.|++.| + |++||++-.+
T Consensus 74 ------------------t~~~a~~ai~AGA~fivs-P~~~~evi----~~~~~~~--v~~~~~~~~~PG~~Tpt 123 (217)
T 3lab_A 74 ------------------TADDFQKAIDAGAQFIVS-PGLTPELI----EKAKQVK--LDGQWQGVFLPGVATAS 123 (217)
T ss_dssp ------------------SHHHHHHHHHHTCSEEEE-SSCCHHHH----HHHHHHH--HHCSCCCEEEEEECSHH
T ss_pred ------------------CHHHHHHHHHcCCCEEEe-CCCcHHHH----HHHHHcC--CCccCCCeEeCCCCCHH
Confidence 245567778999999999 56788764 5566665 6 9999997444
No 6
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.20 E-value=0.39 Score=46.45 Aligned_cols=138 Identities=15% Similarity=0.064 Sum_probs=85.2
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe--cCCCCCCCCCccc------cCC--CcccHHHHHHHHHHHcCCce
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL--RGDPPHGQDKFVQ------IQG--GFACALDLVKHIRSAYGDYF 118 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL--rGDpp~~~~~~~~------~~~--~F~~A~dLVk~Ir~~~gd~F 118 (566)
..+++++|.+.+.+.+.+.+..+.+. ++-|-+- -.||..++.. .+ ... .+....++|+.||+... .
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~-~~~~~~~al~~g~~~~~~~~~i~~i~~~~~--~ 81 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKT-IQESHYRALKNGFKLREAFWIVKEFRRHSS--T 81 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHH-HHHHHHHHHHTTCCHHHHHHHHHHHHTTCC--C
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHH-HHHHHHHHHHCCCCHHHHHHHHHHHHhhCC--C
Confidence 46899999999988888888888777 7766633 2454432210 00 001 22346888999987653 3
Q ss_pred eEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCC
Q 008423 119 GITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINN 198 (566)
Q Consensus 119 ~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s 198 (566)
.|.+.+|.... ... ...+.++.=.++|||+++.- ....+...++++.|++.| ..+++++.|-+.
T Consensus 82 pv~~~~~~~~~-~~~------------~~~~~~~~~~~~Gad~v~~~-~~~~~~~~~~~~~~~~~g--~~~~~~i~~~t~ 145 (248)
T 1geq_A 82 PIVLMTYYNPI-YRA------------GVRNFLAEAKASGVDGILVV-DLPVFHAKEFTEIAREEG--IKTVFLAAPNTP 145 (248)
T ss_dssp CEEEEECHHHH-HHH------------CHHHHHHHHHHHTCCEEEET-TCCGGGHHHHHHHHHHHT--CEEEEEECTTCC
T ss_pred CEEEEeccchh-hhc------------CHHHHHHHHHHCCCCEEEEC-CCChhhHHHHHHHHHHhC--CCeEEEECCCCH
Confidence 45555542110 000 00234444457899999985 334456678888899888 557889988776
Q ss_pred HHHHHHHh
Q 008423 199 YKGFLRMT 206 (566)
Q Consensus 199 ~~~~~r~~ 206 (566)
...+..+.
T Consensus 146 ~e~~~~~~ 153 (248)
T 1geq_A 146 DERLKVID 153 (248)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555543
No 7
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=94.18 E-value=0.44 Score=44.72 Aligned_cols=103 Identities=17% Similarity=0.222 Sum_probs=66.9
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
+.++=+ +..+.+...+.+..+.+.|+.-|-+-.+- ..+.+.++.+|+.++..+.||+.. -
T Consensus 11 ~~i~~~--~~~~~~~~~~~~~~~~~~G~~~iev~~~~---------------~~~~~~i~~ir~~~~~~~~ig~~~---v 70 (205)
T 1wa3_A 11 KIVAVL--RANSVEEAKEKALAVFEGGVHLIEITFTV---------------PDADTVIKELSFLKEKGAIIGAGT---V 70 (205)
T ss_dssp CEEEEE--CCSSHHHHHHHHHHHHHTTCCEEEEETTS---------------TTHHHHHHHTHHHHHTTCEEEEES---C
T ss_pred CEEEEE--ecCCHHHHHHHHHHHHHCCCCEEEEeCCC---------------hhHHHHHHHHHHHCCCCcEEEecc---c
Confidence 344443 45577888888999999999877432211 135677888988876457787642 1
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
| +. .+ .++=+++||||+++ +.|+.+ .++.|++.| +|++||++-
T Consensus 71 ~----~~----------~~---~~~a~~~Gad~iv~-~~~~~~----~~~~~~~~g--~~vi~g~~t 113 (205)
T 1wa3_A 71 T----SV----------EQ---CRKAVESGAEFIVS-PHLDEE----ISQFCKEKG--VFYMPGVMT 113 (205)
T ss_dssp C----SH----------HH---HHHHHHHTCSEEEC-SSCCHH----HHHHHHHHT--CEEECEECS
T ss_pred C----CH----------HH---HHHHHHcCCCEEEc-CCCCHH----HHHHHHHcC--CcEECCcCC
Confidence 1 11 22 34444699999954 566643 556677777 889999863
No 8
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.84 E-value=2.1 Score=43.11 Aligned_cols=175 Identities=15% Similarity=0.148 Sum_probs=110.1
Q ss_pred chhHHHHHHHHHhh-cCCceeEEeccccC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHH
Q 008423 32 ADLTLDIANRMQNT-ICVETMMHLTCTNM-PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKH 109 (566)
Q Consensus 32 ~~~Sl~la~~lq~~-~Gle~i~HLTCrd~-n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~ 109 (566)
-...+++++.+++. ..++.+. ++--|- -.-.++..+..+.++|++-+++. |-|. +.+.++++.
T Consensus 81 ~~~~~~~v~~~r~~~~~~Pivl-m~Y~n~v~~~g~~~f~~~~~~aGvdGvIip--Dlp~------------ee~~~~~~~ 145 (271)
T 3nav_A 81 PDICFELIAQIRARNPETPIGL-LMYANLVYARGIDDFYQRCQKAGVDSVLIA--DVPT------------NESQPFVAA 145 (271)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEE-EECHHHHHHTCHHHHHHHHHHHTCCEEEET--TSCG------------GGCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEE-EecCcHHHHHhHHHHHHHHHHCCCCEEEEC--CCCH------------HHHHHHHHH
Confidence 34567888888875 4666554 333331 22356889999999999998863 4442 346777777
Q ss_pred HHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCC--------HHHHHHHHHHHH
Q 008423 110 IRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYD--------TDMFLKFVNDCR 181 (566)
Q Consensus 110 Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD--------~d~f~~f~~~~R 181 (566)
+++ +|-. .|-.+ -|.. . .+++++=.+.+.+|+-+.-... .+.+.++++++|
T Consensus 146 ~~~-~gl~-~I~lv-ap~t------~------------~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr 204 (271)
T 3nav_A 146 AEK-FGIQ-PIFIA-PPTA------S------------DETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQ 204 (271)
T ss_dssp HHH-TTCE-EEEEE-CTTC------C------------HHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHH
T ss_pred HHH-cCCe-EEEEE-CCCC------C------------HHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHH
Confidence 764 6633 23233 2321 1 2345444455666654422211 234778999999
Q ss_pred HcCCCCcEEeeecccCCHHHHH-HHhc-cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008423 182 QIGITCPIVPGIMPINNYKGFL-RMTG-FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILA 248 (566)
Q Consensus 182 ~~Gi~vPIIpGImPI~s~~~~~-r~~~-l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~ 248 (566)
+.. ++||+.|. .|.+..++. .+.. --|+-|=..+.+.++...++.+ .+++.+.+++++|+.
T Consensus 205 ~~~-~~Pv~vGf-GIst~e~~~~~~~~gADgvIVGSAiv~~i~~~~~~~~----~~~~~~~~~~~~l~~ 267 (271)
T 3nav_A 205 QFD-APPALLGF-GISEPAQVKQAIEAGAAGAISGSAVVKIIETHLDNPA----KQLTELANFTQAMKK 267 (271)
T ss_dssp HTT-CCCEEECS-SCCSHHHHHHHHHTTCSEEEESHHHHHHHHHTTTCHH----HHHHHHHHHHHHHHH
T ss_pred Hhc-CCCEEEEC-CCCCHHHHHHHHHcCCCEEEECHHHHHHHHhhccchH----HHHHHHHHHHHHHHH
Confidence 875 79999986 798999887 4443 4578899999999975433322 245566677777775
No 9
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=93.35 E-value=1.1 Score=43.66 Aligned_cols=120 Identities=19% Similarity=0.281 Sum_probs=77.3
Q ss_pred hHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHH
Q 008423 34 LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSA 113 (566)
Q Consensus 34 ~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~ 113 (566)
.+.++...+.+ .++-+|+ |..+.+.+.+.++.+.+.||+- +=+| . +. ..+.+.++.++++
T Consensus 6 ~~~~~~~~l~~-~~ii~vi----r~~~~~~~~~~~~al~~gGv~~-iel~-~--k~-----------~~~~~~i~~l~~~ 65 (224)
T 1vhc_A 6 TTQQIIEKLRE-LKIVPVI----ALDNADDILPLADTLAKNGLSV-AEIT-F--RS-----------EAAADAIRLLRAN 65 (224)
T ss_dssp CHHHHHHHHHH-HCEEEEE----CCSSGGGHHHHHHHHHHTTCCE-EEEE-T--TS-----------TTHHHHHHHHHHH
T ss_pred chHHHHHHHHH-CCeEEEE----eCCCHHHHHHHHHHHHHcCCCE-EEEe-c--cC-----------chHHHHHHHHHHh
Confidence 34445555654 3444433 2355666778888889999984 4465 1 11 1367889988888
Q ss_pred cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 114 YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 114 ~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
++ ..++|+.. +- +-++.+.=+++||||+++= -+|.+. ++.||+.| +|++||+
T Consensus 66 ~~-~l~vgaGt-vl-------------------~~d~~~~A~~aGAd~v~~p-~~d~~v----~~~ar~~g--~~~i~Gv 117 (224)
T 1vhc_A 66 RP-DFLIAAGT-VL-------------------TAEQVVLAKSSGADFVVTP-GLNPKI----VKLCQDLN--FPITPGV 117 (224)
T ss_dssp CT-TCEEEEES-CC-------------------SHHHHHHHHHHTCSEEECS-SCCHHH----HHHHHHTT--CCEECEE
T ss_pred Cc-CcEEeeCc-Ee-------------------eHHHHHHHHHCCCCEEEEC-CCCHHH----HHHHHHhC--CCEEecc
Confidence 87 48887754 32 1244566677999999985 567654 45788766 7889994
Q ss_pred cccCCHHHHHH
Q 008423 194 MPINNYKGFLR 204 (566)
Q Consensus 194 mPI~s~~~~~r 204 (566)
.|...+.+
T Consensus 118 ---~t~~e~~~ 125 (224)
T 1vhc_A 118 ---NNPMAIEI 125 (224)
T ss_dssp ---CSHHHHHH
T ss_pred ---CCHHHHHH
Confidence 46655543
No 10
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.24 E-value=0.05 Score=53.71 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=81.7
Q ss_pred CceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCC----CCCCccc------cCCCc--ccHHHHHHHHHHHcC
Q 008423 48 VETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH----GQDKFVQ------IQGGF--ACALDLVKHIRSAYG 115 (566)
Q Consensus 48 le~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~----~~~~~~~------~~~~F--~~A~dLVk~Ir~~~g 115 (566)
.-.+++++|-+.+.+...+.++.+.+.|++-|-+ |.|.. ++.. .+ ..++. +...++++.+|+...
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~iel--g~p~~dp~~dg~~-i~~a~~~al~~g~~~~~~~~~i~~ir~~~~ 94 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIEL--GVPCSDPYIDGPI-IQASVARALASGTTMDAVLEMLREVTPELS 94 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEE--ECCCSCCTTSCHH-HHHHHHHHHTTTCCHHHHHHHHHHHGGGCS
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEE--CCCCCCcccCCHH-HHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 4568999999999998999999999999998875 44432 1100 00 01222 234677888887643
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 116 DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 116 d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
.-+.+-.|.+.. .... ++. =.++|||.++.- --..+...++++.++++| ++.++++.|
T Consensus 95 --~Pv~~m~~~~~~-~~~~-------------~~~---a~~aGadgv~v~-d~~~~~~~~~~~~~~~~g--~~~i~~~a~ 152 (262)
T 1rd5_A 95 --CPVVLLSYYKPI-MFRS-------------LAK---MKEAGVHGLIVP-DLPYVAAHSLWSEAKNNN--LELVLLTTP 152 (262)
T ss_dssp --SCEEEECCSHHH-HSCC-------------THH---HHHTTCCEEECT-TCBTTTHHHHHHHHHHTT--CEECEEECT
T ss_pred --CCEEEEecCcHH-HHHH-------------HHH---HHHcCCCEEEEc-CCChhhHHHHHHHHHHcC--CceEEEECC
Confidence 234444444310 0000 111 346899966642 112245788999999998 457788888
Q ss_pred cCCHHHHHHHh
Q 008423 196 INNYKGFLRMT 206 (566)
Q Consensus 196 I~s~~~~~r~~ 206 (566)
-++...+..+.
T Consensus 153 ~t~~e~~~~~~ 163 (262)
T 1rd5_A 153 AIPEDRMKEIT 163 (262)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 88776655433
No 11
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=92.49 E-value=4.7 Score=40.39 Aligned_cols=174 Identities=14% Similarity=0.129 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHhh-cCCceeEEeccccC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHH
Q 008423 33 DLTLDIANRMQNT-ICVETMMHLTCTNM-PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHI 110 (566)
Q Consensus 33 ~~Sl~la~~lq~~-~Gle~i~HLTCrd~-n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~I 110 (566)
...+++++.+++. ..++++. ++--|- -.-.++..+..+.++|++-+++. |-| ++++.++++.+
T Consensus 80 ~~~~~~v~~ir~~~~~~Pivl-m~Y~npv~~~g~e~f~~~~~~aGvdgvii~--Dlp------------~ee~~~~~~~~ 144 (267)
T 3vnd_A 80 SDCFDIITKVRAQHPDMPIGL-LLYANLVFANGIDEFYTKAQAAGVDSVLIA--DVP------------VEESAPFSKAA 144 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEE-EECHHHHHHHCHHHHHHHHHHHTCCEEEET--TSC------------GGGCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEeC--CCC------------HhhHHHHHHHH
Confidence 3457888888865 4555433 222221 22456889999999999998863 433 23577788888
Q ss_pred HHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe--ccC-CC-----HHHHHHHHHHHHH
Q 008423 111 RSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT--QLF-YD-----TDMFLKFVNDCRQ 182 (566)
Q Consensus 111 r~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT--Qlf-fD-----~d~f~~f~~~~R~ 182 (566)
++ +|- .......|... .+++++=.+.+..|+-+ =.- .- .+.+.++++++|+
T Consensus 145 ~~-~gl--~~i~liaP~t~------------------~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~ 203 (267)
T 3vnd_A 145 KA-HGI--APIFIAPPNAD------------------ADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAE 203 (267)
T ss_dssp HH-TTC--EEECEECTTCC------------------HHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHT
T ss_pred HH-cCC--eEEEEECCCCC------------------HHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHH
Confidence 75 653 33334445321 23444434445555544 222 11 2236788999998
Q ss_pred cCCCCcEEeeecccCCHHHHH-HHhc-cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008423 183 IGITCPIVPGIMPINNYKGFL-RMTG-FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILA 248 (566)
Q Consensus 183 ~Gi~vPIIpGImPI~s~~~~~-r~~~-l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~ 248 (566)
. .++||+.|. .|.+..++. .+.. --|+-|=..+.+.++...++.+ .+++...+++++|++
T Consensus 204 ~-~~~pv~vGf-GI~~~e~~~~~~~~gADgvVVGSaiv~~i~~~~~~~~----~~~~~~~~~~~~l~~ 265 (267)
T 3vnd_A 204 F-NAPPPLLGF-GIAEPEQVRAAIKAGAAGAISGSAVVKIIEAHQHDEA----TLLAKLAEFTTAMKA 265 (267)
T ss_dssp T-TCCCEEECS-SCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTSSCHH----HHHHHHHHHHHHHHH
T ss_pred h-cCCCEEEEC-CcCCHHHHHHHHHcCCCEEEECHHHHHHHHHhccChH----HHHHHHHHHHHHHHh
Confidence 7 479999996 788898887 4443 4578888899999975432322 245556677777765
No 12
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=91.12 E-value=6.6 Score=38.74 Aligned_cols=168 Identities=14% Similarity=0.192 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHhhc-CCceeEEecccc-CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHH
Q 008423 33 DLTLDIANRMQNTI-CVETMMHLTCTN-MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHI 110 (566)
Q Consensus 33 ~~Sl~la~~lq~~~-Gle~i~HLTCrd-~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~I 110 (566)
...++++..+++.. .++++. ++..| .-.-.++..+..+.++|++-+++. |-| +....++++.+
T Consensus 79 ~~~~~~v~~ir~~~~~~Pi~~-m~y~n~v~~~g~~~f~~~~~~aG~dgvii~--dl~------------~ee~~~~~~~~ 143 (262)
T 2ekc_A 79 EDVLELSETLRKEFPDIPFLL-MTYYNPIFRIGLEKFCRLSREKGIDGFIVP--DLP------------PEEAEELKAVM 143 (262)
T ss_dssp HHHHHHHHHHHHHCTTSCEEE-ECCHHHHHHHCHHHHHHHHHHTTCCEEECT--TCC------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEEC--CCC------------HHHHHHHHHHH
Confidence 44667788888766 777665 44333 122345788999999999988863 322 23467777777
Q ss_pred HHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--Ee-------ccCCCHHHHHHHHHHHH
Q 008423 111 RSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--IT-------QLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 111 r~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--IT-------QlffD~d~f~~f~~~~R 181 (566)
++ +|- .+-....|. +. .+++++=.+.+..|+ ++ +--+......++++++|
T Consensus 144 ~~-~gl--~~i~l~~p~------t~------------~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr 202 (262)
T 2ekc_A 144 KK-YVL--SFVPLGAPT------ST------------RKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYR 202 (262)
T ss_dssp HH-TTC--EECCEECTT------CC------------HHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHH
T ss_pred HH-cCC--cEEEEeCCC------CC------------HHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHH
Confidence 64 552 221122232 11 123333333344443 32 11111144668899999
Q ss_pred HcCCCCcEEeeecccCCHHHHHHHhcc-CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008423 182 QIGITCPIVPGIMPINNYKGFLRMTGF-CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILA 248 (566)
Q Consensus 182 ~~Gi~vPIIpGImPI~s~~~~~r~~~l-~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~ 248 (566)
+.. ++||..|. .|.+..++..+... -|+-|=..+.+.++. ++.+ .+.++++.+++
T Consensus 203 ~~~-~~pv~vG~-GI~t~e~~~~~~~gADgvIVGSai~~~~~~--~~~~--------~~~~~~~~~~~ 258 (262)
T 2ekc_A 203 ELC-DKPVVVGF-GVSKKEHAREIGSFADGVVVGSALVKLAGQ--KKIE--------DLGNLVKELKE 258 (262)
T ss_dssp HHC-CSCEEEES-SCCSHHHHHHHHTTSSEEEECHHHHHHHHT--TCHH--------HHHHHHHHHHH
T ss_pred hhc-CCCEEEeC-CCCCHHHHHHHHcCCCEEEECHHHHhhhhh--hhHH--------HHHHHHHHHHH
Confidence 875 79999986 78999988886654 467788899888753 2222 34456666654
No 13
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=90.87 E-value=1.8 Score=42.28 Aligned_cols=145 Identities=14% Similarity=0.164 Sum_probs=91.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+.+.+.++.+.+.||+- +=+| . +. ..+.++++.++++++ ..++|+.. + .
T Consensus 35 ~~~~~~~~~~~al~~gGv~~-iel~-~--k~-----------~~~~~~i~~l~~~~~-~~~igagt-v--l--------- 86 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRT-LEVT-L--RS-----------QHGLKAIQVLREQRP-ELCVGAGT-V--L--------- 86 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCE-EEEE-S--SS-----------THHHHHHHHHHHHCT-TSEEEEEC-C--C---------
T ss_pred CCHHHHHHHHHHHHHCCCCE-EEEe-c--CC-----------ccHHHHHHHHHHhCc-ccEEeeCe-E--e---------
Confidence 45666778888889999984 4455 1 10 146788998888886 48887754 3 1
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC----CC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK----IP 214 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~----VP 214 (566)
+-++.+.=+++||||+++= -+|.+. .+.|+..| +|++||+ .|...+.+ +.-.|++ .|
T Consensus 87 --------~~d~~~~A~~aGAd~v~~p-~~d~~v----~~~~~~~g--~~~i~G~---~t~~e~~~-A~~~Gad~vk~FP 147 (225)
T 1mxs_A 87 --------DRSMFAAVEAAGAQFVVTP-GITEDI----LEAGVDSE--IPLLPGI---STPSEIMM-GYALGYRRFKLFP 147 (225)
T ss_dssp --------SHHHHHHHHHHTCSSEECS-SCCHHH----HHHHHHCS--SCEECEE---CSHHHHHH-HHTTTCCEEEETT
T ss_pred --------eHHHHHHHHHCCCCEEEeC-CCCHHH----HHHHHHhC--CCEEEee---CCHHHHHH-HHHCCCCEEEEcc
Confidence 1244566677999999875 567654 45677777 7889994 45555543 2234433 23
Q ss_pred HHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHcCCCeEEEEcCC--chHHHHHHHHH
Q 008423 215 AEITAALEPIKDNEEAVKAY-GIHLGAEMCKKILAHGIKTLHLYTLN--MEKSALAILLN 271 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~-Gv~la~e~i~~L~~~Gv~GiHfyTlN--~e~~v~~IL~~ 271 (566)
. ... | .++++.+... ++++.|+..+ ..+.+..+++.
T Consensus 148 a----------------~~~~G----~~~lk~i~~~-~~~ipvvaiGGI~~~N~~~~l~~ 186 (225)
T 1mxs_A 148 A----------------EISGG----VAAIKAFGGP-FGDIRFCPTGGVNPANVRNYMAL 186 (225)
T ss_dssp H----------------HHHTH----HHHHHHHHTT-TTTCEEEEBSSCCTTTHHHHHHS
T ss_pred C----------------ccccC----HHHHHHHHhh-CCCCeEEEECCCCHHHHHHHHhc
Confidence 1 111 2 3555666654 5577777776 45677777773
No 14
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=89.10 E-value=3.1 Score=42.24 Aligned_cols=106 Identities=22% Similarity=0.272 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
++.+++.+.+..+.+.|++.|+...|+.|.. ...+++-.++++.|++.++ +.|. ..|.. .+
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~-------~~~~~~~~~l~~~ik~~~~--i~i~--~s~g~----~~---- 151 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDLTMGEDPYY-------YEDPNRFVELVQIVKEELG--LPIM--ISPGL----MD---- 151 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEEEECCCHHH-------HHSTHHHHHHHHHHHHHHC--SCEE--EECSS----CC----
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeCCCCcc-------ccCHHHHHHHHHHHHhhcC--ceEE--EeCCC----CC----
Confidence 4778999999999999999999888875421 0124557899999998775 3343 23321 11
Q ss_pred CCccchHHHHHHHHHHHHcCCcEE-EeccC------------CCHHHHHHHHHHHHHcCCCCcEEeeec
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLI-ITQLF------------YDTDMFLKFVNDCRQIGITCPIVPGIM 194 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlf------------fD~d~f~~f~~~~R~~Gi~vPIIpGIm 194 (566)
++.+++|+ +||++.+ +..=- ++.+...+-++.+++.|+ ++-.|+|
T Consensus 152 ------~e~l~~L~---~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi--~v~~~~i 209 (350)
T 3t7v_A 152 ------NATLLKAR---EKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGY--CVEDGIL 209 (350)
T ss_dssp ------HHHHHHHH---HTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTC--EEEEEEE
T ss_pred ------HHHHHHHH---HcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC--eEccceE
Confidence 14455554 5898754 22222 344555556666666774 3444443
No 15
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.48 E-value=4.6 Score=38.92 Aligned_cols=108 Identities=15% Similarity=0.238 Sum_probs=71.0
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
.+++=+.. .+.+.+.+.++.+.+.|++- +=+| .. . ..+.+.++.+++++++ .++|+.. -
T Consensus 17 ~~i~v~r~--~~~~~~~~~~~al~~gGv~~-iel~-~k--~-----------~~~~~~i~~l~~~~~~-~~vgagt---v 75 (214)
T 1wbh_A 17 PVVPVIVV--KKLEHAVPMAKALVAGGVRV-LNVT-LR--T-----------ECAVDAIRAIAKEVPE-AIVGAGT---V 75 (214)
T ss_dssp SEEEEECC--SSGGGHHHHHHHHHHTTCCE-EEEE-SC--S-----------TTHHHHHHHHHHHCTT-SEEEEES---C
T ss_pred CEEEEEEC--CCHHHHHHHHHHHHHcCCCE-EEEe-CC--C-----------hhHHHHHHHHHHHCcC-CEEeeCE---E
Confidence 44554444 35566677888889999984 4466 11 1 1367889988888874 7887743 1
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
. +-++.+.=+++||||+++= -+|.+. .+.|+..| +|++||+ .|...+.+
T Consensus 76 i-----------------~~d~~~~A~~aGAd~v~~p-~~d~~v----~~~~~~~g--~~~i~G~---~t~~e~~~ 124 (214)
T 1wbh_A 76 L-----------------NPQQLAEVTEAGAQFAISP-GLTEPL----LKAATEGT--IPLIPGI---STVSELML 124 (214)
T ss_dssp C-----------------SHHHHHHHHHHTCSCEEES-SCCHHH----HHHHHHSS--SCEEEEE---SSHHHHHH
T ss_pred E-----------------EHHHHHHHHHcCCCEEEcC-CCCHHH----HHHHHHhC--CCEEEec---CCHHHHHH
Confidence 1 1245566677999999875 567654 46677777 7899994 45555543
No 16
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=88.09 E-value=3.8 Score=41.21 Aligned_cols=112 Identities=20% Similarity=0.220 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
++.+++.+.+..+.+.|++.|....|.+|.. .+++-.++++.|++. + +.|.+ .+..- +
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~---------~~~~~~~li~~i~~~-~--~~i~~--s~g~l----~---- 141 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYX---------MPDVISDIVKEIKKM-G--VAVTL--SLGEW----P---- 141 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGG---------TTHHHHHHHHHHHTT-S--CEEEE--ECCCC----C----
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCc---------cHHHHHHHHHHHHhc-C--ceEEE--ecCCC----C----
Confidence 4788999999999999999999877774421 235678899998865 3 44442 22211 1
Q ss_pred CCccchHHHHHHHHHHHHcCCcEE-EeccCC------------CHHHHHHHHHHHHHcCCCCcEEeeec---ccCCHHHH
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLI-ITQLFY------------DTDMFLKFVNDCRQIGITCPIVPGIM---PINNYKGF 202 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff------------D~d~f~~f~~~~R~~Gi~vPIIpGIm---PI~s~~~~ 202 (566)
++.++.|+ ++|++.+ +..=.+ +.+...+-++.+++.|+ ++-.++| |-.|...+
T Consensus 142 ------~e~l~~L~---~ag~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi--~v~~~~i~G~p~et~e~~ 210 (348)
T 3iix_A 142 ------REYYEKWK---EAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGY--ETGAGSMVGLPGQTIDDL 210 (348)
T ss_dssp ------HHHHHHHH---HHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTC--EEEECBEESCTTCCHHHH
T ss_pred ------HHHHHHHH---HhCCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCC--eeccceEEeCCCCCHHHH
Confidence 13444444 4798765 333333 44555666777888886 3444443 33555544
Q ss_pred H
Q 008423 203 L 203 (566)
Q Consensus 203 ~ 203 (566)
.
T Consensus 211 ~ 211 (348)
T 3iix_A 211 V 211 (348)
T ss_dssp H
T ss_pred H
Confidence 3
No 17
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=87.38 E-value=2.5 Score=42.39 Aligned_cols=129 Identities=14% Similarity=0.086 Sum_probs=78.0
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecC-------CCCCCCCCcc--ccC----C-
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG-------DPPHGQDKFV--QIQ----G- 98 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrG-------Dpp~~~~~~~--~~~----~- 98 (566)
+...++.+.+++..+++++.-++. +.+.+++.+....+.++|++-|.+-.. |..+...... ... +
T Consensus 144 e~~~~iv~~vr~~~~~Pv~vKi~~-~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~ 222 (311)
T 1jub_A 144 EATEKLLKEVFTFFTKPLGVKLPP-YFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGA 222 (311)
T ss_dssp HHHHHHHHHHTTTCCSCEEEEECC-CCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESG
T ss_pred HHHHHHHHHHHHhcCCCEEEEECC-CCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccc
Confidence 345677788877677888777765 467778888888889999988775432 1100000000 000 1
Q ss_pred -CcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--EeccCC-CHHHHH
Q 008423 99 -GFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--ITQLFY-DTDMFL 174 (566)
Q Consensus 99 -~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--ITQlff-D~d~f~ 174 (566)
.+..+.++++.+++..+...-|-+.| | ..+ .+...+.+.+|||.+ =|.+++ +++.+.
T Consensus 223 ~~~~~~~~~i~~v~~~~~~~ipvi~~G---G---I~~-------------~~da~~~l~~GAd~V~vg~~~l~~~p~~~~ 283 (311)
T 1jub_A 223 YIKPTALANVRAFYTRLKPEIQIIGTG---G---IET-------------GQDAFEHLLCGATMLQIGTALHKEGPAIFD 283 (311)
T ss_dssp GGHHHHHHHHHHHHTTSCTTSEEEEES---S---CCS-------------HHHHHHHHHHTCSEEEECHHHHHHCTHHHH
T ss_pred cccHHHHHHHHHHHHhcCCCCCEEEEC---C---CCC-------------HHHHHHHHHcCCCEEEEchHHHhcCcHHHH
Confidence 13346788888887664334333333 1 111 233455667899987 588887 998887
Q ss_pred HHHHHHH
Q 008423 175 KFVNDCR 181 (566)
Q Consensus 175 ~f~~~~R 181 (566)
++.+.++
T Consensus 284 ~i~~~l~ 290 (311)
T 1jub_A 284 RIIKELE 290 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666544
No 18
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=87.28 E-value=11 Score=37.20 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=82.3
Q ss_pred CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCc---------------ccHHHHHHHHH
Q 008423 47 CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGF---------------ACALDLVKHIR 111 (566)
Q Consensus 47 Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F---------------~~A~dLVk~Ir 111 (566)
..-.+++++|-+.+.+...+.+..+.+.|++-|-+ |=|..+ . . .+|.| +...++|+.||
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~iei--g~P~sd-p--~-~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir 89 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALEL--GVPFSD-P--L-ADGPTIQNANLRAFAAGVTPAQCFEMLAIIR 89 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEE--ECCCSC-C--T-TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEE--CCCCCC-c--c-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 34579999999999999999999999999998875 433321 0 0 11222 22457889998
Q ss_pred HHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE-EeccCCCHHHHHHHHHHHHHcCCCCcEE
Q 008423 112 SAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI-ITQLFYDTDMFLKFVNDCRQIGITCPIV 190 (566)
Q Consensus 112 ~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlffD~d~f~~f~~~~R~~Gi~vPII 190 (566)
+.+.+ .-|++-+|-+. ..... -.+.+++=.+||||.+ +-.+- .+...++++.++++|+. ++
T Consensus 90 ~~~~~-~Pv~lm~y~n~-v~~~g------------~~~~~~~~~~aGadgii~~d~~--~e~~~~~~~~~~~~g~~--~i 151 (268)
T 1qop_A 90 EKHPT-IPIGLLMYANL-VFNNG------------IDAFYARCEQVGVDSVLVADVP--VEESAPFRQAALRHNIA--PI 151 (268)
T ss_dssp HHCSS-SCEEEEECHHH-HHTTC------------HHHHHHHHHHHTCCEEEETTCC--GGGCHHHHHHHHHTTCE--EE
T ss_pred hcCCC-CCEEEEEcccH-HHHhh------------HHHHHHHHHHcCCCEEEEcCCC--HHHHHHHHHHHHHcCCc--EE
Confidence 87322 33555444321 00000 1234444557899954 43333 35678899999999954 45
Q ss_pred eeecccCCHHHHHHH
Q 008423 191 PGIMPINNYKGFLRM 205 (566)
Q Consensus 191 pGImPI~s~~~~~r~ 205 (566)
+=+-|-++...+..+
T Consensus 152 ~l~~p~t~~~~i~~i 166 (268)
T 1qop_A 152 FICPPNADDDLLRQV 166 (268)
T ss_dssp CEECTTCCHHHHHHH
T ss_pred EEECCCCCHHHHHHH
Confidence 545566666655443
No 19
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=86.01 E-value=26 Score=34.41 Aligned_cols=139 Identities=15% Similarity=0.124 Sum_probs=83.2
Q ss_pred CceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCC--CCcc-------ccCCCc--ccHHHHHHHHHHHcCC
Q 008423 48 VETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQ--DKFV-------QIQGGF--ACALDLVKHIRSAYGD 116 (566)
Q Consensus 48 le~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~--~~~~-------~~~~~F--~~A~dLVk~Ir~~~gd 116 (566)
.-.++|+|+-+-+.+...+.+..+.+.|+.-|-+ |=|..+. +-+. .-..++ +...++|+.+|+..++
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IEl--G~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~ 94 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVLKNGTDILEI--GFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD 94 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEE--ECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEE--CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC
Confidence 4569999999999998889999999999998875 5443210 0000 001122 2245778888887522
Q ss_pred ceeEEEEecCCCCCCCCCCCCCCCccchHHH-HHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 117 YFGITVAGYPEGHPDTIGPDGVASNESYQSD-LLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 117 ~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~d-l~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
.-+++-+|.+.- . ..- ...+++=.++|||.++. +-...+...+|.+.|+++|+. +++=+-|
T Consensus 95 -~Pi~~m~y~n~v-~-------------~~g~~~f~~~~~~aG~dgvii-~dl~~ee~~~~~~~~~~~gl~--~i~l~~p 156 (262)
T 2ekc_A 95 -IPFLLMTYYNPI-F-------------RIGLEKFCRLSREKGIDGFIV-PDLPPEEAEELKAVMKKYVLS--FVPLGAP 156 (262)
T ss_dssp -SCEEEECCHHHH-H-------------HHCHHHHHHHHHHTTCCEEEC-TTCCHHHHHHHHHHHHHTTCE--ECCEECT
T ss_pred -CCEEEEecCcHH-H-------------HhhHHHHHHHHHHcCCCEEEE-CCCCHHHHHHHHHHHHHcCCc--EEEEeCC
Confidence 345554444310 0 000 12234444799996555 344558889999999999965 3333335
Q ss_pred cCCHHHHHHHh
Q 008423 196 INNYKGFLRMT 206 (566)
Q Consensus 196 I~s~~~~~r~~ 206 (566)
-++...+..++
T Consensus 157 ~t~~~rl~~ia 167 (262)
T 2ekc_A 157 TSTRKRIKLIC 167 (262)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 55555555443
No 20
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=85.68 E-value=4.5 Score=41.06 Aligned_cols=142 Identities=13% Similarity=0.237 Sum_probs=85.3
Q ss_pred CcCEEEecCCCCCC-------CchhHHHHHHHHHhhc---------CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEE
Q 008423 17 TRHSATSRWGAGGS-------TADLTLDIANRMQNTI---------CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVL 80 (566)
Q Consensus 17 ~p~fVsVTwgagG~-------~~~~Sl~la~~lq~~~---------Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNIL 80 (566)
..|+|.|-.+.-.. ......++.+.+++.. +++++.-+++ +.+.+++.+....+.++|++-|.
T Consensus 165 g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~-~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 165 YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAP-DLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCS-CCCHHHHHHHHHHHHHTTCSEEE
T ss_pred cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecC-CCCHHHHHHHHHHHHHcCCcEEE
Confidence 46777775431111 1123457777777665 7888888775 67878888888899999999888
Q ss_pred EecCCCCCCCCC-c--cccCCCc------ccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHH
Q 008423 81 ALRGDPPHGQDK-F--VQIQGGF------ACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYL 151 (566)
Q Consensus 81 aLrGDpp~~~~~-~--~~~~~~F------~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~L 151 (566)
+-.+-....... . ....+++ ..+.++++.+++..+...-|-++| | .. +-+..
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~G---G---I~-------------~~~da 304 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVG---G---ID-------------SVIAA 304 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEES---S---CC-------------SHHHH
T ss_pred EeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEEC---C---CC-------------CHHHH
Confidence 654321111000 0 0011222 246788889988764334343333 1 11 13335
Q ss_pred HHHHHcCCcEE--EeccCC-CHHHHHHHHH
Q 008423 152 KKKVDAGADLI--ITQLFY-DTDMFLKFVN 178 (566)
Q Consensus 152 k~KvdAGAdFi--ITQlff-D~d~f~~f~~ 178 (566)
.+.+++|||++ =|.++| |++.+.+..+
T Consensus 305 ~~~l~~GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 305 REKIAAGASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp HHHHHHTCSEEEESHHHHHHCHHHHHHHHH
T ss_pred HHHHHCCCCEEEeeHHHHhcCcHHHHHHHh
Confidence 66777899987 578888 8988877654
No 21
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=83.75 E-value=5.9 Score=44.17 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=81.1
Q ss_pred cccCCHHHHHHHHH-------HHHHcCCCEEEEecCCCC------------CCCCCcc-ccCCCcccHHHHHHHHHHHcC
Q 008423 56 CTNMPVEKIDHALQ-------TIKSNGIQNVLALRGDPP------------HGQDKFV-QIQGGFACALDLVKHIRSAYG 115 (566)
Q Consensus 56 Crd~n~~~L~~~L~-------~a~~~GIrNILaLrGDpp------------~~~~~~~-~~~~~F~~A~dLVk~Ir~~~g 115 (566)
++.|+.++|++.++ .|+++|++-|=+=.|-.- +-.|.|- ...+......++|+.||+..|
T Consensus 143 p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g 222 (690)
T 3k30_A 143 ARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECA 222 (690)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhC
Confidence 35566666665543 456789998876443221 1111110 011223358899999999999
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE-Ee----------ccCCCHHHHHHHHHHHHHcC
Q 008423 116 DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI-IT----------QLFYDTDMFLKFVNDCRQIG 184 (566)
Q Consensus 116 d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-IT----------QlffD~d~f~~f~~~~R~~G 184 (566)
.+|.|++=-.|....+.. . . ..|...+.+.++.|+|++ ++ +.++....+..+.+.+|++
T Consensus 223 ~~~~v~~r~s~~~~~~~g-~-------~-~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~- 292 (690)
T 3k30_A 223 GRAAVACRITVEEEIDGG-I-------T-REDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKL- 292 (690)
T ss_dssp TSSEEEEEEECCCCSTTS-C-------C-HHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGG-
T ss_pred CCceEEEEECccccCCCC-C-------C-HHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHH-
Confidence 889999998886543211 1 1 156777788888899986 33 2233333334566666664
Q ss_pred CCCcEEeeecccCCHHHHHHH
Q 008423 185 ITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 185 i~vPIIpGImPI~s~~~~~r~ 205 (566)
+++|||.. =-|.+...+.++
T Consensus 293 ~~~pvi~~-G~i~~~~~a~~~ 312 (690)
T 3k30_A 293 TTKPVVGV-GRFTSPDAMVRQ 312 (690)
T ss_dssp CSSCEEEC-SCCCCHHHHHHH
T ss_pred cCCeEEEe-CCCCCHHHHHHH
Confidence 47887632 235565555443
No 22
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=83.74 E-value=7.4 Score=40.60 Aligned_cols=115 Identities=14% Similarity=0.182 Sum_probs=72.4
Q ss_pred cCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC-C--ccccCCC------cccHHHHHHHHHHHcCC
Q 008423 46 ICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD-K--FVQIQGG------FACALDLVKHIRSAYGD 116 (566)
Q Consensus 46 ~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~-~--~~~~~~~------F~~A~dLVk~Ir~~~gd 116 (566)
..+++..-++. +.+.+++.+....+.++|++-|.+.-.-..+... . .....++ +..+.++|+.|++..+.
T Consensus 219 ~~~Pv~vKi~p-~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~ 297 (367)
T 3zwt_A 219 HRPAVLVKIAP-DLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG 297 (367)
T ss_dssp GCCEEEEEECS-CCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT
T ss_pred CCceEEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC
Confidence 56788888875 6788889999999999999998876322111000 0 0001222 33478999999988753
Q ss_pred cee-EEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE--eccCC-CHHHHHHHHHHHH
Q 008423 117 YFG-ITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII--TQLFY-DTDMFLKFVNDCR 181 (566)
Q Consensus 117 ~F~-IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--TQlff-D~d~f~~f~~~~R 181 (566)
..- ||+.+.= ..+...+++++|||.++ |-++| ++..+.++.+.++
T Consensus 298 ~ipvI~~GGI~--------------------s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~ 346 (367)
T 3zwt_A 298 RVPIIGVGGVS--------------------SGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELE 346 (367)
T ss_dssp CSCEEEESSCC--------------------SHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred CceEEEECCCC--------------------CHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHHH
Confidence 343 3443311 13335666679999876 77767 5777777666554
No 23
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=83.65 E-value=22 Score=34.94 Aligned_cols=175 Identities=11% Similarity=0.093 Sum_probs=99.2
Q ss_pred hHHHHHHHHHhh-cCCceeEEecccc-CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHH
Q 008423 34 LTLDIANRMQNT-ICVETMMHLTCTN-MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIR 111 (566)
Q Consensus 34 ~Sl~la~~lq~~-~Gle~i~HLTCrd-~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir 111 (566)
..+++++.+++. ..++++. ++..| .-...++..+..+.++|++.+++. |-+ +....++++.++
T Consensus 80 ~~~~~v~~ir~~~~~~Pv~l-m~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~~------------~e~~~~~~~~~~ 144 (268)
T 1qop_A 80 QCFEMLAIIREKHPTIPIGL-LMYANLVFNNGIDAFYARCEQVGVDSVLVA--DVP------------VEESAPFRQAAL 144 (268)
T ss_dssp HHHHHHHHHHHHCSSSCEEE-EECHHHHHTTCHHHHHHHHHHHTCCEEEET--TCC------------GGGCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEE-EEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CCC------------HHHHHHHHHHHH
Confidence 345778888876 5666433 22222 111234788899999999988873 322 134567778887
Q ss_pred HHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC------CHHHHHHHHHHHHHcCC
Q 008423 112 SAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY------DTDMFLKFVNDCRQIGI 185 (566)
Q Consensus 112 ~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff------D~d~f~~f~~~~R~~Gi 185 (566)
+ +| ........|.- .. +.++.+.+. ..|..+++|=.-| ......++++++|+.-
T Consensus 145 ~-~g--~~~i~l~~p~t------~~---------~~i~~i~~~-~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~- 204 (268)
T 1qop_A 145 R-HN--IAPIFICPPNA------DD---------DLLRQVASY-GRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH- 204 (268)
T ss_dssp H-TT--CEEECEECTTC------CH---------HHHHHHHHH-CCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT-
T ss_pred H-cC--CcEEEEECCCC------CH---------HHHHHHHhh-CCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc-
Confidence 5 55 34445555642 10 223333322 2233344432211 1233457788888764
Q ss_pred CCcEEeeecccCCHHHHHH-Hhc-cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008423 186 TCPIVPGIMPINNYKGFLR-MTG-FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILA 248 (566)
Q Consensus 186 ~vPIIpGImPI~s~~~~~r-~~~-l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~ 248 (566)
++||+.|. .|.+..++.. +.. --|+-|=..+.+.++....+++ ...+.+.++++.|+.
T Consensus 205 ~~pi~vgg-GI~t~e~~~~~~~agAD~vVVGSai~~~~~~~~~~~~----~~~~~~~~~~~~l~~ 264 (268)
T 1qop_A 205 AAPALQGF-GISSPEQVSAAVRAGAAGAISGSAIVKIIEKNLASPK----QMLAELRSFVSAMKA 264 (268)
T ss_dssp CCCEEEES-SCCSHHHHHHHHHTTCSEEEECHHHHHHHHHTTTCHH----HHHHHHHHHHHHHHH
T ss_pred CCcEEEEC-CCCCHHHHHHHHHcCCCEEEEChHHhhhHhhcccCch----HHHHHHHHHHHHHHH
Confidence 79999886 7888888877 443 4467788888888753212222 123455677777764
No 24
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=83.58 E-value=21 Score=35.39 Aligned_cols=152 Identities=18% Similarity=0.257 Sum_probs=94.6
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNM-PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIR 111 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~-n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir 111 (566)
...+++++.+++. -++.=|+--|- -+-.++..+..|+++|++.+++ -|-| ++.+.++.+..+
T Consensus 76 ~~~~~~~~~~r~~---~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~Ii--pDLP------------~eE~~~~~~~~~ 138 (252)
T 3tha_A 76 HSVFELLARIKTK---KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIV--PELS------------FEESDDLIKECE 138 (252)
T ss_dssp HHHHHHHHHCCCS---SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEEC--TTCC------------GGGCHHHHHHHH
T ss_pred HHHHHHHHHHhcC---CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEe--CCCC------------HHHHHHHHHHHH
Confidence 4455555555532 35555565543 2457899999999999999983 3443 234566666665
Q ss_pred HHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcE--EEeccCC---C---HHHHHHHHHHHHHc
Q 008423 112 SAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADL--IITQLFY---D---TDMFLKFVNDCRQI 183 (566)
Q Consensus 112 ~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdF--iITQlff---D---~d~f~~f~~~~R~~ 183 (566)
++|-.. |-.+ -|.. . .+++++=.+.+-.| .++-.-. . .+.+.++++++|+.
T Consensus 139 -~~Gl~~-I~lv-aP~t------~------------~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~ 197 (252)
T 3tha_A 139 -RYNIAL-ITLV-SVTT------P------------KERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSF 197 (252)
T ss_dssp -HTTCEE-CEEE-ETTS------C------------HHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTT
T ss_pred -HcCCeE-EEEe-CCCC------c------------HHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHh
Confidence 466432 3222 2321 1 23344333334455 4442211 1 23467899999987
Q ss_pred CCCCcEEeeecccCCHHHHHHHhcc-CCCCCCHHHHHHhCCC
Q 008423 184 GITCPIVPGIMPINNYKGFLRMTGF-CKTKIPAEITAALEPI 224 (566)
Q Consensus 184 Gi~vPIIpGImPI~s~~~~~r~~~l-~Gv~VP~~il~~Le~~ 224 (566)
.++||+.|. .|.+..++..+.+. -|+-|=..+++.++..
T Consensus 198 -~~~Pv~vGf-GIst~e~a~~~~~~ADGVIVGSAiVk~i~~~ 237 (252)
T 3tha_A 198 -TNLPIFVGF-GIQNNQDVKRMRKVADGVIVGTSIVKCFKQG 237 (252)
T ss_dssp -CCSCEEEES-SCCSHHHHHHHTTTSSEEEECHHHHHHTTSS
T ss_pred -cCCcEEEEc-CcCCHHHHHHHHhcCCEEEECHHHHHHHHhc
Confidence 479999996 79999999887764 4788889999999763
No 25
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=82.31 E-value=5.5 Score=39.50 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHH---HcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 62 EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRS---AYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~---~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.........+.+.|.++|.+|.+|.+ ++.++.+.+++ +.|-.. +....|+.+.. +.
T Consensus 127 ~~~~~~~~~l~~~g~~~iaii~~~~~--------------~g~~~~~~~~~~~~~~G~~v-~~~~~~~~~~~---d~--- 185 (364)
T 3lop_A 127 QEIDKMITALVTIGVTRIGVLYQEDA--------------LGKEAITGVERTLKAHALAI-TAMASYPRNTA---NV--- 185 (364)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTH--------------HHHHHHHHHHHHHHTTTCCC-SEEEEECTTSC---CC---
T ss_pred HHHHHHHHHHHHcCCceEEEEEeCch--------------hhHHHHHHHHHHHHHcCCcE-EEEEEecCCCc---cH---
Confidence 44455555567899999999976531 12233332222 344221 22334554321 22
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPIN 197 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~ 197 (566)
...+.+|+ ++++|.|+. +.+......+++.+++.|+++||+ |.-.+.
T Consensus 186 ------~~~~~~l~---~~~~d~v~~--~~~~~~a~~~~~~~~~~g~~~~~i-~~~~~~ 232 (364)
T 3lop_A 186 ------GPAVDKLL---AADVQAIFL--GATAEPAAQFVRQYRARGGEAQLL-GLSSID 232 (364)
T ss_dssp ------HHHHHHHH---HSCCSEEEE--ESCHHHHHHHHHHHHHTTCCCEEE-ECTTSC
T ss_pred ------HHHHHHHH---hCCCCEEEE--ecCcHHHHHHHHHHHHcCCCCeEE-EeccCC
Confidence 23444444 368998886 234556778999999999999965 544443
No 26
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=82.16 E-value=7.3 Score=37.17 Aligned_cols=97 Identities=13% Similarity=0.185 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+.+.+.++.+.+.|++-| =+|= +. ..+.++++.+++ . ..++|+.. .-
T Consensus 23 ~~~~~~~~~~~l~~gGv~~i-el~~---k~-----------~~~~~~i~~~~~--~-~~~~gag~-vl------------ 71 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGAL-EITL---RT-----------EKGLEALKALRK--S-GLLLGAGT-VR------------ 71 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEE-EEEC---SS-----------THHHHHHHHHTT--S-SCEEEEES-CC------------
T ss_pred CHHHHHHHHHHHHHcCCCEE-EEeC---CC-----------hHHHHHHHHHhC--C-CCEEEeCe-Ee------------
Confidence 44455677778888898854 4651 10 136788888886 3 57887654 21
Q ss_pred CccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 140 SNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
+-++++.=+++||||+++- .+|.+. .+.|++.| +|++||+ .|...+.+
T Consensus 72 -------~~d~~~~A~~~GAd~v~~~-~~d~~v----~~~~~~~g--~~~i~G~---~t~~e~~~ 119 (207)
T 2yw3_A 72 -------SPKEAEAALEAGAAFLVSP-GLLEEV----AALAQARG--VPYLPGV---LTPTEVER 119 (207)
T ss_dssp -------SHHHHHHHHHHTCSEEEES-SCCHHH----HHHHHHHT--CCEEEEE---CSHHHHHH
T ss_pred -------eHHHHHHHHHcCCCEEEcC-CCCHHH----HHHHHHhC--CCEEecC---CCHHHHHH
Confidence 1234555567899999887 577543 45677767 7799995 45655544
No 27
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=80.50 E-value=5.9 Score=38.98 Aligned_cols=48 Identities=15% Similarity=0.035 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCH
Q 008423 146 SDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNY 199 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~ 199 (566)
..+..|+ ++++|.|+. +.+.+....+++.+++.|+++|++ |.....+.
T Consensus 184 ~~~~~l~---~~~~d~v~~--~~~~~~a~~~~~~~~~~g~~~~~~-~~~~~~~~ 231 (356)
T 3ipc_A 184 ALISKMK---EAGVSIIYW--GGLHTEAGLIIRQAADQGLKAKLV-SGDGIVSN 231 (356)
T ss_dssp HHHHHHH---HTTCCEEEE--ESCHHHHHHHHHHHHHHTCCCEEE-ECGGGCSH
T ss_pred HHHHHHH---hcCCCEEEE--ccCchHHHHHHHHHHHCCCCCcEE-EeccccCH
Confidence 3444444 368898874 344555668999999999999976 43444443
No 28
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=80.07 E-value=14 Score=36.18 Aligned_cols=148 Identities=10% Similarity=0.094 Sum_probs=80.9
Q ss_pred hhcc-CCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEe------cc-------ccC-CHHHHHHHHHHHHHcC
Q 008423 11 TAWW-PTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHL------TC-------TNM-PVEKIDHALQTIKSNG 75 (566)
Q Consensus 11 ~~~~-~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HL------TC-------rd~-n~~~L~~~L~~a~~~G 75 (566)
.++. ...++.|-.+. .+..+..++..+.+ .+++.+.-. +. ... +..........+.+.|
T Consensus 65 ~~l~~~~~v~~iig~~-----~s~~~~~~~~~~~~-~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 138 (358)
T 3hut_A 65 RAFVDDPRVVGVLGDF-----SSTVSMAAGSIYGK-EGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDG 138 (358)
T ss_dssp HHHHHCTTEEEEEECS-----SHHHHHHHHHHHHH-HTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTT
T ss_pred HHHhccCCcEEEEcCC-----CcHHHHHHHHHHHH-CCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcC
Confidence 4455 56666663221 23345555555554 677776531 11 111 3344555555556779
Q ss_pred CCEEEEecCCCCCCCCCccccCCCcccHHHHH----HHHHHHcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHH
Q 008423 76 IQNVLALRGDPPHGQDKFVQIQGGFACALDLV----KHIRSAYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLY 150 (566)
Q Consensus 76 IrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV----k~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~ 150 (566)
.++|.+|..|.+ ++.++. +.++ +.|. ++ ....++.+.. +. ...+.+
T Consensus 139 ~~~ia~i~~~~~--------------~~~~~~~~~~~~l~-~~g~--~v~~~~~~~~~~~---~~---------~~~~~~ 189 (358)
T 3hut_A 139 FTSVAVIGVTTD--------------WGLSSAQAFRKAFE-LRGG--AVVVNEEVPPGNR---RF---------DDVIDE 189 (358)
T ss_dssp CCEEEEEEESSH--------------HHHHHHHHHHHHHH-HTTC--EEEEEEEECTTCC---CC---------HHHHHH
T ss_pred CCEEEEEecCcH--------------HHHHHHHHHHHHHH-HcCC--EEEEEEecCCCCc---cH---------HHHHHH
Confidence 999999962211 122333 3333 3442 33 2334554421 22 244555
Q ss_pred HHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCH
Q 008423 151 LKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNY 199 (566)
Q Consensus 151 Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~ 199 (566)
|++ +++|.|+. +-+.+....+++.+++.|+++|++ |.-.+.+.
T Consensus 190 l~~---~~~d~i~~--~~~~~~a~~~~~~~~~~g~~~p~~-~~~~~~~~ 232 (358)
T 3hut_A 190 IED---EAPQAIYL--AMAYEDAAPFLRALRARGSALPVY-GSSALYSP 232 (358)
T ss_dssp HHH---HCCSEEEE--ESCHHHHHHHHHHHHHTTCCCCEE-ECGGGCSH
T ss_pred HHh---cCCCEEEE--ccCchHHHHHHHHHHHcCCCCcEE-ecCcccCH
Confidence 543 58898875 456767788999999999999976 43344443
No 29
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=79.70 E-value=21 Score=34.62 Aligned_cols=150 Identities=11% Similarity=0.012 Sum_probs=81.5
Q ss_pred hhccCC-CcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEec------------cccC-CHHHHHHHHHHHHHcCC
Q 008423 11 TAWWPT-TRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLT------------CTNM-PVEKIDHALQTIKSNGI 76 (566)
Q Consensus 11 ~~~~~~-~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLT------------Crd~-n~~~L~~~L~~a~~~GI 76 (566)
.++... .++.|-.+. .+..+..++..+++ .+++.+...+ +... +..........+.+.|.
T Consensus 62 ~~l~~~~~v~~iig~~-----~s~~~~~~~~~~~~-~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 135 (362)
T 3snr_A 62 RRFVTESKADVIMGSS-----VTPPSVAISNVANE-AQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKKNNV 135 (362)
T ss_dssp HHHHHTSCCSEEEECS-----SHHHHHHHHHHHHH-HTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHhccCceEEEcCC-----CcHHHHHHHHHHHH-cCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHhcCC
Confidence 345444 566664332 22334555555554 5777665321 1112 23445555556678899
Q ss_pred CEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHH---HcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHHHH
Q 008423 77 QNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRS---AYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLYLK 152 (566)
Q Consensus 77 rNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~---~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk 152 (566)
++|.+|..|.+ ++.+..+.+++ +.| .++ ....|+.+.. +. ...+..++
T Consensus 136 ~~ia~i~~~~~--------------~~~~~~~~~~~~l~~~g--~~v~~~~~~~~~~~---~~---------~~~~~~l~ 187 (362)
T 3snr_A 136 KTVGYIGYSDS--------------YGDLWFNDLKKQGEAMG--LKIVGEERFARPDT---SV---------AGQALKLV 187 (362)
T ss_dssp CEEEEEEESSH--------------HHHHHHHHHHHHHHHTT--CEEEEEEEECTTCS---CC---------HHHHHHHH
T ss_pred CEEEEEecCch--------------HHHHHHHHHHHHHHHcC--CEEEEEeecCCCCC---CH---------HHHHHHHH
Confidence 99999943221 12333322222 345 332 3344554421 22 24455554
Q ss_pred HHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHH
Q 008423 153 KKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYK 200 (566)
Q Consensus 153 ~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~ 200 (566)
+ +++|.|+. +-.......+++.+++.|+++|+ .++....+..
T Consensus 188 ~---~~~dav~~--~~~~~~a~~~~~~~~~~g~~~p~-i~~~g~~~~~ 229 (362)
T 3snr_A 188 A---ANPDAILV--GASGTAAALPQTTLRERGYNGLI-YQTHGAASMD 229 (362)
T ss_dssp H---HCCSEEEE--ECCHHHHHHHHHHHHHTTCCSEE-EECGGGCSHH
T ss_pred h---cCCCEEEE--ecCcchHHHHHHHHHHcCCCccE-EeccCcCcHH
Confidence 3 58898876 22345567899999999999998 5665665544
No 30
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=79.69 E-value=6.6 Score=40.86 Aligned_cols=141 Identities=12% Similarity=0.021 Sum_probs=85.5
Q ss_pred cCEEEecCC----CCCCC----chhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcC-CCEEEEe------
Q 008423 18 RHSATSRWG----AGGST----ADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNG-IQNVLAL------ 82 (566)
Q Consensus 18 p~fVsVTwg----agG~~----~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~G-IrNILaL------ 82 (566)
.|+|.|--+ +|+.. .+...++.+.+++...+++..=++- +.+.+++.+....+.+.| +.-|.+.
T Consensus 156 ~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p-~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g 234 (354)
T 4ef8_A 156 GVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPP-YFDFAHFDAAAEILNEFPKVQFITCINSIGNG 234 (354)
T ss_dssp CCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECC-CCSHHHHHHHHHHHHTCTTEEEEEECCCEEEE
T ss_pred CCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecC-CCCHHHHHHHHHHHHhCCCccEEEEecccCcc
Confidence 466665443 33432 2445677778887788999888887 568888888888788888 7776542
Q ss_pred -----cCCCCCCCCCccccCC------CcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHH
Q 008423 83 -----RGDPPHGQDKFVQIQG------GFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYL 151 (566)
Q Consensus 83 -----rGDpp~~~~~~~~~~~------~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~L 151 (566)
.+..+... .....+ .+..+.++|+.+++..+.---||+.+.= + .+..
T Consensus 235 ~~idi~~~~~~~~--~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~-------s-------------~~da 292 (354)
T 4ef8_A 235 LVIDAETESVVIK--PKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVY-------T-------------GEDA 292 (354)
T ss_dssp ECEETTTTEESCS--GGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCC-------S-------------HHHH
T ss_pred eeeeccCCccccc--cccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcC-------C-------------HHHH
Confidence 12111100 000112 2345889999999874332344444321 1 2234
Q ss_pred HHHHHcCCcEEE--eccCCC-HHHHHHHHHHHH
Q 008423 152 KKKVDAGADLII--TQLFYD-TDMFLKFVNDCR 181 (566)
Q Consensus 152 k~KvdAGAdFiI--TQlffD-~d~f~~f~~~~R 181 (566)
.+++.+|||.++ |.++|+ +..+.++.+.++
T Consensus 293 ~~~l~aGAd~V~vgra~l~~GP~~~~~i~~~l~ 325 (354)
T 4ef8_A 293 FLHVLAGASMVQVGTALQEEGPSIFERLTSELL 325 (354)
T ss_dssp HHHHHHTEEEEEECHHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEhHHHHHhCHHHHHHHHHHHH
Confidence 556679999876 888888 777766655544
No 31
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=79.25 E-value=29 Score=34.88 Aligned_cols=128 Identities=12% Similarity=0.145 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~G-t---TGE~---~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~---------- 92 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGG-T---TGES---PTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNN---------- 92 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCC----------
Confidence 4889999999999999999999764 2 1221 1122233566777766554322 344444321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcE-EEeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADL-IITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdF-iITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||. .+.-++| +.+.+.++.+.+-++ .++||+.==.|- ..|+.
T Consensus 93 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~ 153 (301)
T 1xky_A 93 -------THASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAES-TPLPVMLYNVPG-----------RSIVQ 153 (301)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHT-CSSCEEEEECHH-----------HHSSC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCcc-----------ccCCC
Confidence 124455555556789995 4556666 667788888777664 368987544332 13566
Q ss_pred CCHHHHHHhC
Q 008423 213 IPAEITAALE 222 (566)
Q Consensus 213 VP~~il~~Le 222 (566)
++.+.+.+|.
T Consensus 154 l~~~~~~~La 163 (301)
T 1xky_A 154 ISVDTVVRLS 163 (301)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 6666665553
No 32
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=78.98 E-value=27 Score=35.83 Aligned_cols=127 Identities=13% Similarity=0.142 Sum_probs=70.0
Q ss_pred ccccCCHHHHHHHHH-------HHHHcCCCEEEEecCC---------CCCC--CCCccc-cCCCcccHHHHHHHHHHHcC
Q 008423 55 TCTNMPVEKIDHALQ-------TIKSNGIQNVLALRGD---------PPHG--QDKFVQ-IQGGFACALDLVKHIRSAYG 115 (566)
Q Consensus 55 TCrd~n~~~L~~~L~-------~a~~~GIrNILaLrGD---------pp~~--~~~~~~-~~~~F~~A~dLVk~Ir~~~g 115 (566)
+++.|+.++|++.++ .|+++|++-|=+=.|- |-.. .+.|-. .........++|+.||+..|
T Consensus 138 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG 217 (349)
T 3hgj_A 138 VPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVP 217 (349)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSC
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 345677777776554 3567899877654443 2211 111100 01112346889999999999
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHH-HcCCcEEE-eccCC--------CHHHHHHHHHHHHHcCC
Q 008423 116 DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKV-DAGADLII-TQLFY--------DTDMFLKFVNDCRQIGI 185 (566)
Q Consensus 116 d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI-TQlff--------D~d~f~~f~~~~R~~Gi 185 (566)
++|.|||=..|+...+.. . +. .+..++.+++ ++|+|+|- +.-.+ .......+++++|+. .
T Consensus 218 ~d~pV~vRls~~~~~~~g-~-------~~-~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~-~ 287 (349)
T 3hgj_A 218 RELPLFVRVSATDWGEGG-W-------SL-EDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKR-V 287 (349)
T ss_dssp TTSCEEEEEESCCCSTTS-C-------CH-HHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHH-H
T ss_pred CCceEEEEeccccccCCC-C-------CH-HHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHH-c
Confidence 889999988886432211 1 11 3445555554 57999864 32111 111234556666654 2
Q ss_pred CCcEEe
Q 008423 186 TCPIVP 191 (566)
Q Consensus 186 ~vPIIp 191 (566)
++||+.
T Consensus 288 ~iPVi~ 293 (349)
T 3hgj_A 288 GLRTGA 293 (349)
T ss_dssp CCEEEE
T ss_pred CceEEE
Confidence 577654
No 33
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=78.91 E-value=41 Score=33.02 Aligned_cols=147 Identities=12% Similarity=0.058 Sum_probs=80.3
Q ss_pred hhhccCC-CcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEe------cc---------ccCC-HHHHHHHHHHHH
Q 008423 10 WTAWWPT-TRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHL------TC---------TNMP-VEKIDHALQTIK 72 (566)
Q Consensus 10 ~~~~~~~-~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HL------TC---------rd~n-~~~L~~~L~~a~ 72 (566)
..++... .++.|-.+. .+..+..++..+++ .+++.+.-. +- ...+ ..........+.
T Consensus 74 ~~~l~~~~~v~~iig~~-----~s~~~~~~~~~~~~-~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 147 (375)
T 4evq_A 74 TTKLIQSEKADVLIGTV-----HSGVAMAMVKIARE-DGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMI 147 (375)
T ss_dssp HHCCCCCSCCSEEEECS-----SHHHHHHHHHHHHH-HCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCceEEEcCC-----ccHHHHHHHHHHHH-cCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHH
Confidence 3455553 667764433 22345555666654 677776321 11 1112 334445555667
Q ss_pred HcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHHH
Q 008423 73 SNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLYL 151 (566)
Q Consensus 73 ~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~L 151 (566)
+.|.++|.+|..|... .-.....+.+.++ ++|. .+ +...|+.+.. +. ...+.++
T Consensus 148 ~~g~~~ia~i~~~~~~----------~~~~~~~~~~~l~-~~G~--~v~~~~~~~~~~~---d~---------~~~~~~l 202 (375)
T 4evq_A 148 KAGLKKAVTVTWKYAA----------GEEMVSGFKKSFT-AGKG--EVVKDITIAFPDV---EF---------QSALAEI 202 (375)
T ss_dssp HTTCCEEEEEEESSHH----------HHHHHHHHHHHHH-HTTC--EEEEEEEECTTCC---CC---------HHHHHHH
T ss_pred HcCCcEEEEEecCchH----------HHHHHHHHHHHHH-HcCC--eEEEEEecCCCCc---cH---------HHHHHHH
Confidence 7899999999643210 0001222233343 3453 33 4445665432 22 2445555
Q ss_pred HHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 152 KKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 152 k~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
++ .++|.|+.- +.| .....+++.+++.|+++||+..
T Consensus 203 ~~---~~~dai~~~-~~~-~~a~~~~~~~~~~g~~vp~~~~ 238 (375)
T 4evq_A 203 AS---LKPDCVYAF-FSG-GGALKFIKDYAAANLGIPLWGP 238 (375)
T ss_dssp HH---HCCSEEEEE-CCT-HHHHHHHHHHHHTTCCCCEEEE
T ss_pred Hh---cCCCEEEEe-cCc-chHHHHHHHHHHcCCCceEEec
Confidence 43 489988863 344 4567899999999999998754
No 34
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=78.01 E-value=39 Score=33.67 Aligned_cols=178 Identities=13% Similarity=0.091 Sum_probs=105.4
Q ss_pred ccchhhccCCCcCEEEecCCCC--------CCCch----hHHHHHHHHHhhcCCceeEEeccc-------cCCHHHHHHH
Q 008423 7 SSGWTAWWPTTRHSATSRWGAG--------GSTAD----LTLDIANRMQNTICVETMMHLTCT-------NMPVEKIDHA 67 (566)
Q Consensus 7 ~~~~~~~~~~~p~fVsVTwgag--------G~~~~----~Sl~la~~lq~~~Gle~i~HLTCr-------d~n~~~L~~~ 67 (566)
..|..+.+....+.|.|-.... +.+.. ...+.++.+++ .|+++...+.|. ..+.+.+.+.
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~~~~~~~~~~~~~~~~~~~ 161 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS-ANISVRGYVSCALGCPYEGKISPAKVAEV 161 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETTTCBTTTBSCCHHHHHHH
T ss_pred HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCCCCCHHHHHHH
Confidence 4455666666677777744221 11222 33445566664 799998887764 3478999999
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHH
Q 008423 68 LQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147 (566)
Q Consensus 68 L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~d 147 (566)
++.+.++|++.|-+- |-... ..-....+||+.+++..+ ...|++-++...- .-
T Consensus 162 ~~~~~~~Ga~~i~l~--DT~G~--------~~P~~~~~lv~~l~~~~~-~~~i~~H~Hn~~G----------------la 214 (298)
T 2cw6_A 162 TKKFYSMGCYEISLG--DTIGV--------GTPGIMKDMLSAVMQEVP-LAALAVHCHDTYG----------------QA 214 (298)
T ss_dssp HHHHHHTTCSEEEEE--ETTSC--------CCHHHHHHHHHHHHHHSC-GGGEEEEEBCTTS----------------CH
T ss_pred HHHHHHcCCCEEEec--CCCCC--------cCHHHHHHHHHHHHHhCC-CCeEEEEECCCCc----------------hH
Confidence 999999999876432 43211 111237889999998875 3567776644321 12
Q ss_pred HHHHHHHHHcCCcEEEeccC-----------CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHH----HHhccCCCC
Q 008423 148 LLYLKKKVDAGADLIITQLF-----------YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFL----RMTGFCKTK 212 (566)
Q Consensus 148 l~~Lk~KvdAGAdFiITQlf-----------fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~----r~~~l~Gv~ 212 (566)
+....+=++|||+.|-+=+. --.-..+.++..++..|++. || +...+. .+.+.+|..
T Consensus 215 ~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~g~~~----~i----dl~~l~~~~~~~~~~~~~~ 286 (298)
T 2cw6_A 215 LANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHT----GV----NLQKLLEAGNFICQALNRK 286 (298)
T ss_dssp HHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHHTCBC----CC----CHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhcCCCC----Cc----CHHHHHHHHHHHHHHHCCC
Confidence 44445558899998866332 11223445555556566542 32 233322 234677888
Q ss_pred CCHHHHHH
Q 008423 213 IPAEITAA 220 (566)
Q Consensus 213 VP~~il~~ 220 (566)
+|......
T Consensus 287 ~~~~~~~~ 294 (298)
T 2cw6_A 287 TSSKVAQA 294 (298)
T ss_dssp CCCHHHHH
T ss_pred Cchhhhhh
Confidence 88776544
No 35
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=77.89 E-value=17 Score=37.17 Aligned_cols=111 Identities=17% Similarity=0.141 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC--CCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGD--PPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGD--pp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~ 136 (566)
++.+++.+.+..+.+.|++.|....|. |+. ..+++..++++.|++. + +.|. ..|.-- +
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~---------~~~~~l~~ll~~ik~~-g--~~i~--~t~G~l----~-- 158 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHE---------RDMPYLEQMVQGVKAM-G--LEAC--MTLGTL----S-- 158 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT---------TTHHHHHHHHHHHHHT-T--SEEE--EECSSC----C--
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc---------CCHHHHHHHHHHHHHc-C--CeEE--EecCCC----C--
Confidence 467888888888888999998865542 321 2456788999999874 4 2343 233211 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEEEe--c---c-------CCCHHHHHHHHHHHHHcCCC--CcEEeeecccCCHHHH
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLIIT--Q---L-------FYDTDMFLKFVNDCRQIGIT--CPIVPGIMPINNYKGF 202 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFiIT--Q---l-------ffD~d~f~~f~~~~R~~Gi~--vPIIpGImPI~s~~~~ 202 (566)
++.++.|+ ++|.+.+-- | = -.+.+..++-++.++++|+. +-+|+|+ -.+...+
T Consensus 159 --------~e~l~~L~---~aGvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl--~et~ed~ 225 (369)
T 1r30_A 159 --------ESQAQRLA---NAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL--GETVKDR 225 (369)
T ss_dssp --------HHHHHHHH---HHCCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECS--SCCHHHH
T ss_pred --------HHHHHHHH---HCCCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeC--CCCHHHH
Confidence 13455554 579987641 1 0 14556777778888888863 3345554 4555543
No 36
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=77.55 E-value=19 Score=34.12 Aligned_cols=166 Identities=14% Similarity=0.099 Sum_probs=94.5
Q ss_pred hhhccCCCcCEEEec--CCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCC--
Q 008423 10 WTAWWPTTRHSATSR--WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGD-- 85 (566)
Q Consensus 10 ~~~~~~~~p~fVsVT--wgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGD-- 85 (566)
...+.+...+++-+. +|+--......++++..+++.++.+...|+...+ -...+..+.++|++-|. +-++
T Consensus 29 i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd-----~~~~v~~~~~~Gad~v~-vh~~~~ 102 (230)
T 1rpx_A 29 VKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVE-----PDQRVPDFIKAGADIVS-VHCEQS 102 (230)
T ss_dssp HHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSS-----HHHHHHHHHHTTCSEEE-EECSTT
T ss_pred HHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecC-----HHHHHHHHHHcCCCEEE-EEecCc
Confidence 445555667776665 3332111123468888888777888899997655 23567777889998774 5555
Q ss_pred CCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--E
Q 008423 86 PPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--I 163 (566)
Q Consensus 86 pp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--I 163 (566)
++ ....++++.+++ +| ..+|++.+|.- +. +.+ +.+..|+||+ +
T Consensus 103 ~~-------------~~~~~~~~~~~~-~g--~~ig~~~~p~t-~~--------------e~~----~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 103 ST-------------IHLHRTINQIKS-LG--AKAGVVLNPGT-PL--------------TAI----EYVLDAVDLVLIM 147 (230)
T ss_dssp TC-------------SCHHHHHHHHHH-TT--SEEEEEECTTC-CG--------------GGG----TTTTTTCSEEEEE
T ss_pred cc-------------hhHHHHHHHHHH-cC--CcEEEEeCCCC-CH--------------HHH----HHHHhhCCEEEEE
Confidence 32 124566777765 44 67999998752 11 111 2234689987 2
Q ss_pred ec-c-----CCCHHHH---HHHHHHHHHcCCCCcE--EeeecccCCHHHHHHHhccCCCCCCHHHH
Q 008423 164 TQ-L-----FYDTDMF---LKFVNDCRQIGITCPI--VPGIMPINNYKGFLRMTGFCKTKIPAEIT 218 (566)
Q Consensus 164 TQ-l-----ffD~d~f---~~f~~~~R~~Gi~vPI--IpGImPI~s~~~~~r~~~l~Gv~VP~~il 218 (566)
|- + -|+...+ .+..+.+.+.|.++|| ..||-| .+...+.. +.-.++.|-..+.
T Consensus 148 ~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~-~n~~~~~~-aGad~vvvgSaI~ 211 (230)
T 1rpx_A 148 SVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGP-KNAYKVIE-AGANALVAGSAVF 211 (230)
T ss_dssp SSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTHHHHHH-HTCCEEEESHHHH
T ss_pred EEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHH-cCCCEEEEChhhh
Confidence 22 2 2343222 2222222234456775 677874 56655443 3456677777664
No 37
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=77.54 E-value=33 Score=34.49 Aligned_cols=129 Identities=15% Similarity=0.134 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.=.++++...+..+.. .-+|+.++-
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~---------- 84 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLG-S---TGEF---AYLGTAQREAVVRATIEAAQRRVPVVAGVASTS---------- 84 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTS-G---GGTG---GGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCc---cccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC----------
Confidence 4889999999999999999998552 1 1111 1112223456777766654333 556666532
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcE-EEeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADL-IITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdF-iITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||. .+.-++| +.+.+.+|.+.+-++ ..+||+.==.|- .+|+.
T Consensus 85 -------t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~ 145 (300)
T 3eb2_A 85 -------VADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADA-VEIPVVIYTNPQ-----------FQRSD 145 (300)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHH-CSSCEEEEECTT-----------TCSSC
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECcc-----------ccCCC
Confidence 113445455555689995 3444555 667778877777654 358887555443 24677
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+++.+|..
T Consensus 146 l~~~~~~~La~ 156 (300)
T 3eb2_A 146 LTLDVIARLAE 156 (300)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHHc
Confidence 77777777754
No 38
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=77.14 E-value=13 Score=35.68 Aligned_cols=69 Identities=16% Similarity=0.098 Sum_probs=39.6
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHH
Q 008423 68 LQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147 (566)
Q Consensus 68 L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~d 147 (566)
|+.|.+..++-|++|.||-- .-.++|+.+++ ++..- + .+|.-..--.. + +.-
T Consensus 22 l~~al~s~~~~ifll~g~i~--------------~l~~~v~~lk~-~~K~v---~-Vh~Dli~Gls~-d--------~~a 73 (192)
T 3kts_A 22 MEKILELDLTYMVMLETHVA--------------QLKALVKYAQA-GGKKV---L-LHADLVNGLKN-D--------DYA 73 (192)
T ss_dssp HHHHTTSSCCEEEECSEETT--------------THHHHHHHHHH-TTCEE---E-EEGGGEETCCC-S--------HHH
T ss_pred HHHHHcCCCCEEEEecCcHH--------------HHHHHHHHHHH-cCCeE---E-EecCchhccCC-c--------HHH
Confidence 44444577899999988863 24566777775 33211 1 14433211111 1 145
Q ss_pred HHHHHHHHHcCCcEEEecc
Q 008423 148 LLYLKKKVDAGADLIITQL 166 (566)
Q Consensus 148 l~~Lk~KvdAGAdFiITQl 166 (566)
+++|++ ..++|+|||+=
T Consensus 74 i~fL~~--~~~pdGIIsTk 90 (192)
T 3kts_A 74 IDFLCT--EICPDGIISTR 90 (192)
T ss_dssp HHHHHH--TTCCSEEEESC
T ss_pred HHHHHh--CCCCCEEEeCc
Confidence 788885 45888888873
No 39
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=76.92 E-value=9.1 Score=36.42 Aligned_cols=102 Identities=11% Similarity=0.092 Sum_probs=62.7
Q ss_pred HH--HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE--ecCCCCCCCCCCC
Q 008423 61 VE--KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA--GYPEGHPDTIGPD 136 (566)
Q Consensus 61 ~~--~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA--gyPEgHpe~~~~~ 136 (566)
.+ .+.+....+.+.|+..|.+. ..+.++.||+..+-.| +++. .||.+|--....
T Consensus 33 ~~~~~~~~~a~~~~~~G~~~i~~~--------------------~~~~i~~i~~~~~~p~-i~~~~~~~~~~~~~i~~~- 90 (234)
T 1yxy_A 33 ETGGIMPLMAKAAQEAGAVGIRAN--------------------SVRDIKEIQAITDLPI-IGIIKKDYPPQEPFITAT- 90 (234)
T ss_dssp TTCCSHHHHHHHHHHHTCSEEEEE--------------------SHHHHHHHHTTCCSCE-EEECBCCCTTSCCCBSCS-
T ss_pred CccchHHHHHHHHHHCCCcEeecC--------------------CHHHHHHHHHhCCCCE-EeeEcCCCCccccccCCh-
Confidence 55 67777888888899877641 1244777777665434 4443 677777433222
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEEEeccCC--CH--HHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLIITQLFY--DT--DMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff--D~--d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
.+++++=+++|||++...... ++ +.+.++++.+|+..-.++|++++..
T Consensus 91 -----------~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t 142 (234)
T 1yxy_A 91 -----------MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIST 142 (234)
T ss_dssp -----------HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSS
T ss_pred -----------HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCC
Confidence 344555567999988654332 12 2456778888876435777777653
No 40
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=76.82 E-value=41 Score=34.83 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=16.8
Q ss_pred HHHHHcCCCeEEEEcCCchHHHHHHHHHcC
Q 008423 244 KKILAHGIKTLHLYTLNMEKSALAILLNLG 273 (566)
Q Consensus 244 ~~L~~~Gv~GiHfyTlN~e~~v~~IL~~l~ 273 (566)
+++...|+.|.-=|.-..++.+..++..|+
T Consensus 285 ~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~ 314 (361)
T 3khj_A 285 NKMVPEGIEGRVKYKGEMEGVVYQLVGGLR 314 (361)
T ss_dssp ---------CEEECCBCHHHHHHHHHHHHH
T ss_pred cccCCCccEEeCCCCCCHHHHHHHHHHHHH
Confidence 345566888888888888888888887763
No 41
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=76.78 E-value=44 Score=33.41 Aligned_cols=130 Identities=10% Similarity=0.109 Sum_probs=78.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.=.++++...+..+.. .-+|+.++-
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~---------- 87 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVG-T---TGES---ATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANN---------- 87 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc-c---ccCc---ccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcC----------
Confidence 4889999999999999999999764 1 1221 1122233456777766554333 334443321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+.++- ++||+.==.|- .+|+.
T Consensus 88 -------t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~-~lPiilYn~P~-----------~tg~~ 148 (297)
T 3flu_A 88 -------TVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT-SIPMIIYNVPG-----------RTVVS 148 (297)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEECHH-----------HHSSC
T ss_pred -------HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEECCc-----------hhccC
Confidence 2244555555556899964 344555 5567777777776653 78987544442 24677
Q ss_pred CCHHHHHHhCCC
Q 008423 213 IPAEITAALEPI 224 (566)
Q Consensus 213 VP~~il~~Le~~ 224 (566)
++.+.+.+|...
T Consensus 149 l~~~~~~~La~~ 160 (297)
T 3flu_A 149 MTNDTILRLAEI 160 (297)
T ss_dssp CCHHHHHHHTTS
T ss_pred CCHHHHHHHHcC
Confidence 777777777543
No 42
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=76.68 E-value=12 Score=39.87 Aligned_cols=114 Identities=12% Similarity=0.159 Sum_probs=70.6
Q ss_pred CCc-eeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC-CccccCCC------cccHHHHHHHHHHHcCCce
Q 008423 47 CVE-TMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD-KFVQIQGG------FACALDLVKHIRSAYGDYF 118 (566)
Q Consensus 47 Gle-~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~-~~~~~~~~------F~~A~dLVk~Ir~~~gd~F 118 (566)
.++ +.+=++. +.+.+++.+..+.+.++|+.-|.+.-.-..+..- ......++ +..+.++|+.+++..+..+
T Consensus 268 ~~P~V~VKi~p-d~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~i 346 (415)
T 3i65_A 268 KKPLVFVKLAP-DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 346 (415)
T ss_dssp SCCEEEEEECS-CCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCS
T ss_pred CCCeEEEEecC-CCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCC
Confidence 467 5777776 7788889999999999999998866322211100 00001222 4458899999998765333
Q ss_pred e-EEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE--eccCCC-HHHHHHHHHHHH
Q 008423 119 G-ITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII--TQLFYD-TDMFLKFVNDCR 181 (566)
Q Consensus 119 ~-IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--TQlffD-~d~f~~f~~~~R 181 (566)
- ||+.+.= .-+...+++.+|||.++ |-++|+ +..+.+..+.++
T Consensus 347 PIIg~GGI~--------------------s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~ 393 (415)
T 3i65_A 347 PIIASGGIF--------------------SGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELN 393 (415)
T ss_dssp CEEECSSCC--------------------SHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred CEEEECCCC--------------------CHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHH
Confidence 3 4443321 13335677789999754 777787 666666555443
No 43
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=76.62 E-value=49 Score=32.65 Aligned_cols=131 Identities=14% Similarity=0.072 Sum_probs=72.1
Q ss_pred chhHHHHHHHHHhhcCCceeEE------eccc---------cCCH-HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc
Q 008423 32 ADLTLDIANRMQNTICVETMMH------LTCT---------NMPV-EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ 95 (566)
Q Consensus 32 ~~~Sl~la~~lq~~~Gle~i~H------LTCr---------d~n~-~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~ 95 (566)
+..+..++..+++ .+++.+.- ++.. ..+. .........+.+.|.++|.+|..|...+
T Consensus 81 s~~~~a~~~~~~~-~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~~~~~~g------ 153 (375)
T 3i09_A 81 SATALSMNQVAAE-KKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGGKTWFFLTADYAFG------ 153 (375)
T ss_dssp HHHHHHHHHHHHH-HTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSHHH------
T ss_pred cHHHHHHHHHHHH-cCceEEEeCCCchhhhcccCCCcEEEeeCChHHHHHHHHHHHHHcCCceEEEEecccHHH------
Confidence 3445666666664 57766543 2211 1122 2333444455678999999995432210
Q ss_pred cCCCcccHHHHHHHHHHHcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHH
Q 008423 96 IQGGFACALDLVKHIRSAYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFL 174 (566)
Q Consensus 96 ~~~~F~~A~dLVk~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~ 174 (566)
-..+..+.+.++ +.| .+| +...||.+.. +. ...+.+++ ++++|.|+. +.+.+...
T Consensus 154 ----~~~~~~~~~~~~-~~G--~~v~~~~~~~~~~~---d~---------~~~l~~i~---~~~~d~v~~--~~~~~~~~ 209 (375)
T 3i09_A 154 ----KALEKNTADVVK-ANG--GKVLGEVRHPLSAS---DF---------SSFLLQAQ---SSKAQILGL--ANAGGDTV 209 (375)
T ss_dssp ----HHHHHHHHHHHH-HTT--CEEEEEEEECTTCS---CC---------HHHHHHHH---HTCCSEEEE--ECCHHHHH
T ss_pred ----HHHHHHHHHHHH-HcC--CEEeeeeeCCCCCc---cH---------HHHHHHHH---hCCCCEEEE--ecCchhHH
Confidence 001222223333 345 344 4455665532 22 24444444 368998875 34555667
Q ss_pred HHHHHHHHcCCCCc-EEeee
Q 008423 175 KFVNDCRQIGITCP-IVPGI 193 (566)
Q Consensus 175 ~f~~~~R~~Gi~vP-IIpGI 193 (566)
.+++.+++.|++.| ++.|.
T Consensus 210 ~~~~~~~~~g~~~~~~i~g~ 229 (375)
T 3i09_A 210 NAIKAAKEFGITKTMKLAAL 229 (375)
T ss_dssp HHHHHHHHTTGGGTCEEEES
T ss_pred HHHHHHHHcCCCcCceEEec
Confidence 89999999999988 66665
No 44
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=76.34 E-value=36 Score=34.39 Aligned_cols=126 Identities=14% Similarity=0.124 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++.. .|+. ..-..+.=.++++...+..+.. .-+|+.++-
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~Gt----TGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~---------- 88 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILAN----FSEQ---FAITDDERDVLTRTILEHVAGRVPVIVTTSHYS---------- 88 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSG----GGTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----ccCc---ccCCHHHHHHHHHHHHHHhCCCCcEEEecCCch----------
Confidence 58899999999999999999997741 1211 1112223456777766654333 344443321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC------CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY------DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFC 209 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff------D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~ 209 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|- +
T Consensus 89 -------t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a-~~lPiilYn~P~------------t 148 (309)
T 3fkr_A 89 -------TQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDA-IAIPIMVQDAPA------------S 148 (309)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHH-CSSCEEEEECGG------------G
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCCC------------C
Confidence 2244555555567899964 445666 567788887777664 368887544342 3
Q ss_pred CCCCCHHHHHHh
Q 008423 210 KTKIPAEITAAL 221 (566)
Q Consensus 210 Gv~VP~~il~~L 221 (566)
|+.++.+.+.+|
T Consensus 149 g~~l~~~~~~~L 160 (309)
T 3fkr_A 149 GTALSAPFLARM 160 (309)
T ss_dssp CCCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 556666665555
No 45
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=76.14 E-value=12 Score=37.03 Aligned_cols=153 Identities=10% Similarity=0.010 Sum_probs=78.5
Q ss_pred hhccCC-CcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEec----------------cccC-CHHHHHHHHHHHH
Q 008423 11 TAWWPT-TRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLT----------------CTNM-PVEKIDHALQTIK 72 (566)
Q Consensus 11 ~~~~~~-~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLT----------------Crd~-n~~~L~~~L~~a~ 72 (566)
+++... .++.|-.+. .+..+..++..+++ .+++.+..-+ +... +..........+.
T Consensus 82 ~~l~~~~~v~~iig~~-----~s~~~~~~~~~~~~-~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 155 (386)
T 3sg0_A 82 RKLLSEEKVDVLIGSS-----LTPVSLPLIDIAAE-AKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIA 155 (386)
T ss_dssp HHHHHTSCCSEEECCS-----SHHHHHHHHHHHHH-TTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHHHH
T ss_pred HHHHhhcCceEEECCC-----CchhHHHHHHHHHh-cCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHHHH
Confidence 445444 566653222 23345555555554 6777665321 1111 2344455555567
Q ss_pred HcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHHH
Q 008423 73 SNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLYL 151 (566)
Q Consensus 73 ~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~L 151 (566)
+.|.++|.+|..|.+.+ -.....+.+.+++ +| ..+ +...|+.+.. +. ...+.++
T Consensus 156 ~~g~~~ia~i~~~~~~~----------~~~~~~~~~~l~~-~g--~~v~~~~~~~~~~~---d~---------~~~~~~~ 210 (386)
T 3sg0_A 156 KTGAKKVGYIGFSDAYG----------EGYYKVLAAAAPK-LG--FELTTHEVYARSDA---SV---------TGQVLKI 210 (386)
T ss_dssp HTTCCEEEEEEESSHHH----------HHHHHHHHHHHHH-HT--CEECCCEEECTTCS---CC---------HHHHHHH
T ss_pred hcCCCEEEEEecCchHH----------HHHHHHHHHHHHH-cC--CEEEEEEeeCCCCC---cH---------HHHHHHH
Confidence 78999999995332110 0012222233333 44 233 2234554321 22 2445544
Q ss_pred HHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHH
Q 008423 152 KKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYK 200 (566)
Q Consensus 152 k~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~ 200 (566)
++ +++|.|+.- -+.+....+++.+++.|++.|++ |.....+..
T Consensus 211 ~~---~~~dav~~~--~~~~~a~~~~~~~~~~g~~~~~~-~~~~~~~~~ 253 (386)
T 3sg0_A 211 IA---TKPDAVFIA--SAGTPAVLPQKALRERGFKGAIY-QTHGVATEE 253 (386)
T ss_dssp HH---TCCSEEEEE--CCSGGGHHHHHHHHHTTCCSEEE-CCGGGCSHH
T ss_pred Hh---cCCCEEEEe--cCcchHHHHHHHHHHcCCCCcEE-eccccCCHH
Confidence 43 689988763 23344568899999999998864 555555543
No 46
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=76.07 E-value=52 Score=32.64 Aligned_cols=105 Identities=14% Similarity=0.184 Sum_probs=61.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE-ecCCCCCCCCCC
Q 008423 57 TNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA-GYPEGHPDTIGP 135 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA-gyPEgHpe~~~~ 135 (566)
+.++.+.+.+.+..+.+.|++.|..+.+|...-|.. .. ....-.+|++.|++..|. ..|.+. .+|..- +.
T Consensus 31 r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~---~~-~~~~l~~Ll~~l~~~~gi-~~ir~~~~~p~~l----~~ 101 (304)
T 2qgq_A 31 RSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGID---LY-RKQALPDLLRRLNSLNGE-FWIRVMYLHPDHL----TE 101 (304)
T ss_dssp CBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHH---HH-SSCCHHHHHHHHHTSSSS-CEEEECCCCGGGC----CH
T ss_pred eeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCC---CC-cHHHHHHHHHHHHhcCCC-cEEEEeeeecccC----CH
Confidence 567889999999999889999988665554322110 00 123578889888764342 234332 344321 11
Q ss_pred CCCCCccchHHHHHHHHHHHHcC--CcEEE--ecc-----------CCCHHHHHHHHHHHHHc
Q 008423 136 DGVASNESYQSDLLYLKKKVDAG--ADLII--TQL-----------FYDTDMFLKFVNDCRQI 183 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAG--AdFiI--TQl-----------ffD~d~f~~f~~~~R~~ 183 (566)
+.++.|+ ++| ++++- -|- -|+.+.+.+.++.+|++
T Consensus 102 ----------e~l~~l~---~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~ 151 (304)
T 2qgq_A 102 ----------EIISAML---ELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRER 151 (304)
T ss_dssp ----------HHHHHHH---HCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHH---hCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhh
Confidence 3344443 366 55542 122 36677888888888883
No 47
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=75.75 E-value=28 Score=34.71 Aligned_cols=146 Identities=15% Similarity=0.138 Sum_probs=77.4
Q ss_pred hhccCC-CcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEec--------c------ccCC-HHHHHHHHHHHHH-
Q 008423 11 TAWWPT-TRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLT--------C------TNMP-VEKIDHALQTIKS- 73 (566)
Q Consensus 11 ~~~~~~-~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLT--------C------rd~n-~~~L~~~L~~a~~- 73 (566)
+++... .++.|-. . .+..+..++..+.+ .+++.+.--+ + ...+ ..+.......+.+
T Consensus 68 ~~li~~~~V~~iig-~-----~s~~~~~~~~~~~~-~~iP~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~ 140 (392)
T 3lkb_A 68 EEAVDRFKIPVFLS-Y-----ATGANLQLKPLIQE-LRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIARE 140 (392)
T ss_dssp HHHHHTTCCSCEEE-C-----CHHHHHHHHHHHHH-HTCCEEESCCCGGGGSSSSCTTBCEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCcEEEEe-C-----CcHHHHHHHHHHHh-CCceEEecccChhhccCCCCCceEecCCChHHHHHHHHHHHHHh
Confidence 345543 5666532 2 13345555666654 5777665110 0 0112 3344444445555
Q ss_pred cCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHH
Q 008423 74 NGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKK 153 (566)
Q Consensus 74 ~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~ 153 (566)
+|.++|.+|..|.+.+ -..+..+.+.+++ .|.. -+....|+.+.. +. ...+.++++
T Consensus 141 ~g~~~iaii~~~~~~g----------~~~~~~~~~~l~~-~G~~-v~~~~~~~~~~~---d~---------~~~~~~l~~ 196 (392)
T 3lkb_A 141 KKGAKVALVVHPSPFG----------RAPVEDARKAARE-LGLQ-IVDVQEVGSGNL---DN---------TALLKRFEQ 196 (392)
T ss_dssp CTTCEEEEEECSSHHH----------HTTHHHHHHHHHH-HTCE-EEEEEECCTTCC---CC---------HHHHHHHHH
T ss_pred CCCCEEEEEEeCCchh----------hhHHHHHHHHHHH-cCCe-EEEEEeeCCCCc---CH---------HHHHHHHHh
Confidence 5999999997542210 0112233344443 4422 123344554321 22 244555543
Q ss_pred HHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 154 KVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 154 KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
+++|.|+. +........+++.+++.|+++|++.+
T Consensus 197 ---~~~dav~~--~~~~~~a~~~~~~~~~~g~~~~~~~~ 230 (392)
T 3lkb_A 197 ---AGVEYVVH--QNVAGPVANILKDAKRLGLKMRHLGA 230 (392)
T ss_dssp ---TTCCEEEE--ESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred ---cCCCEEEE--ecCcchHHHHHHHHHHcCCCceEEEe
Confidence 68998884 23555667899999999999998654
No 48
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=75.12 E-value=72 Score=32.00 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.=.++++...+..+.. .-+|+.++-
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~s---------- 96 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAG-T---TGES---PTTTAAEKLELLKAVREEVGDRAKLIAGVGTNN---------- 96 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS-T---TTTT---TTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSC----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCC----------
Confidence 5889999999999999999999764 2 1221 1122233566777766554333 333443311
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|- .+|+.
T Consensus 97 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a-~~lPiilYn~P~-----------~tg~~ 157 (304)
T 3cpr_A 97 -------TRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAA-TEVPICLYDIPG-----------RSGIP 157 (304)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CCSCEEEEECHH-----------HHSSC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCcc-----------ccCcC
Confidence 2244555555567899953 555666 677778877776654 368887543332 24677
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+.+.+|..
T Consensus 158 l~~~~~~~La~ 168 (304)
T 3cpr_A 158 IESDTMRRLSE 168 (304)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHHc
Confidence 77777777754
No 49
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=75.00 E-value=22 Score=34.28 Aligned_cols=167 Identities=15% Similarity=0.050 Sum_probs=94.6
Q ss_pred hhccCCCcCE--EEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 008423 11 TAWWPTTRHS--ATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH 88 (566)
Q Consensus 11 ~~~~~~~p~f--VsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~ 88 (566)
.++.+...++ ++|-+|..-..-..-.++++.+++.+.++...||-..|. +..++.+.++|..-|.+- ..+..
T Consensus 24 ~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp-----~~~i~~~~~aGadgv~vh-~e~~~ 97 (230)
T 1tqj_A 24 KAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEP-----EKYVEDFAKAGADIISVH-VEHNA 97 (230)
T ss_dssp HHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSG-----GGTHHHHHHHTCSEEEEE-CSTTT
T ss_pred HHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCH-----HHHHHHHHHcCCCEEEEC-ccccc
Confidence 4455556666 455554322111223478888888777888999988543 346677888999877644 22100
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE-----
Q 008423 89 GQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII----- 163 (566)
Q Consensus 89 ~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI----- 163 (566)
.++...+++.|++ +| ..+|++.+|.-.. ++ .+.+..++||+.
T Consensus 98 -----------~~~~~~~~~~i~~-~g--~~~gv~~~p~t~~------------------e~-~~~~~~~~D~v~~msv~ 144 (230)
T 1tqj_A 98 -----------SPHLHRTLCQIRE-LG--KKAGAVLNPSTPL------------------DF-LEYVLPVCDLILIMSVN 144 (230)
T ss_dssp -----------CTTHHHHHHHHHH-TT--CEEEEEECTTCCG------------------GG-GTTTGGGCSEEEEESSC
T ss_pred -----------chhHHHHHHHHHH-cC--CcEEEEEeCCCcH------------------HH-HHHHHhcCCEEEEEEec
Confidence 0235677788875 54 6899999885321 11 223345899772
Q ss_pred ----eccCC--CHHHHHHHHHHHHHcCCCCcE--EeeecccCCHHHHHHHhccCCCCCCHHHH
Q 008423 164 ----TQLFY--DTDMFLKFVNDCRQIGITCPI--VPGIMPINNYKGFLRMTGFCKTKIPAEIT 218 (566)
Q Consensus 164 ----TQlff--D~d~f~~f~~~~R~~Gi~vPI--IpGImPI~s~~~~~r~~~l~Gv~VP~~il 218 (566)
.|-|- ..+.+.+..+.+.+.|.++|| .-||-+ .+...+.. +-.-++-+=..+.
T Consensus 145 pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~-aGad~vvvGSai~ 205 (230)
T 1tqj_A 145 PGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLE-AGANAIVAGSAVF 205 (230)
T ss_dssp C----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHH-HTCCEEEESHHHH
T ss_pred cccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHH-cCCCEEEECHHHH
Confidence 23321 134444444444445667776 567766 66665543 2233444445554
No 50
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=74.76 E-value=54 Score=30.41 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=69.1
Q ss_pred CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecC
Q 008423 47 CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYP 126 (566)
Q Consensus 47 Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyP 126 (566)
....++=+.| .+.+.+.+.+..+.+.|++-|-+--.|+ ...+.|+.+++.++..|.||+.+.-
T Consensus 6 ~~~i~~~i~~--~d~~~~~~~~~~~~~~G~~~i~l~~~~~---------------~~~~~i~~i~~~~~~~l~vg~g~~~ 68 (212)
T 2v82_A 6 KLPLIAILRG--ITPDEALAHVGAVIDAGFDAVEIPLNSP---------------QWEQSIPAIVDAYGDKALIGAGTVL 68 (212)
T ss_dssp SSCEEEECTT--CCHHHHHHHHHHHHHHTCCEEEEETTST---------------THHHHHHHHHHHHTTTSEEEEECCC
T ss_pred CCCEEEEEeC--CCHHHHHHHHHHHHHCCCCEEEEeCCCh---------------hHHHHHHHHHHhCCCCeEEEecccc
Confidence 3445555544 4667788888888899998776532221 1346677777777767888765421
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 127 EGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 127 EgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
+ . .++..=+++|||++..- ..+. ++++.+++.| .++++| +.|...+.+
T Consensus 69 -------~-----------~--~~i~~a~~~Gad~V~~~-~~~~----~~~~~~~~~g--~~~~~g---~~t~~e~~~ 116 (212)
T 2v82_A 69 -------K-----------P--EQVDALARMGCQLIVTP-NIHS----EVIRRAVGYG--MTVCPG---CATATEAFT 116 (212)
T ss_dssp -------S-----------H--HHHHHHHHTTCCEEECS-SCCH----HHHHHHHHTT--CEEECE---ECSHHHHHH
T ss_pred -------C-----------H--HHHHHHHHcCCCEEEeC-CCCH----HHHHHHHHcC--CCEEee---cCCHHHHHH
Confidence 0 1 23455557899998732 2333 3456777777 567888 466666544
No 51
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=74.71 E-value=50 Score=31.95 Aligned_cols=118 Identities=18% Similarity=0.302 Sum_probs=72.8
Q ss_pred cCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcC-CCEEEEecCCCCCCCCCcccc
Q 008423 18 RHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNG-IQNVLALRGDPPHGQDKFVQI 96 (566)
Q Consensus 18 p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~G-IrNILaLrGDpp~~~~~~~~~ 96 (566)
.+.++|-..+.-..-..++++|..+++ .|+.+..=+.. ....+.++.. .++| ++-||+++=.|--++.
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~-~G~k~gvalnp-~tp~~~~~~~----l~~g~~D~VlvmsV~pGf~gq----- 154 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRD-NNLWCGISIKP-KTDVQKLVPI----LDTNLINTVLVMTVEPGFGGQ----- 154 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHT-TTCEEEEEECT-TSCGGGGHHH----HTTTCCSEEEEESSCTTCSSC-----
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHH-cCCeEEEEeCC-CCcHHHHHHH----hhcCCcCEEEEeeeccCCCCc-----
Confidence 888877766543234456666668875 78887776522 2233444433 3465 9999999877755432
Q ss_pred CCCcc-cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe-ccCCC
Q 008423 97 QGGFA-CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT-QLFYD 169 (566)
Q Consensus 97 ~~~F~-~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-QlffD 169 (566)
.|. ...+-|+.+|+..+ .+.|.|.| |- + .+.+++=++||||.+|. -.+|.
T Consensus 155 --~f~~~~l~ki~~lr~~~~-~~~I~VdG---GI----~-------------~~ti~~~~~aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 155 --SFMHDMMGKVSFLRKKYK-NLNIQVDG---GL----N-------------IETTEISASHGANIIVAGTSIFN 206 (227)
T ss_dssp --CCCGGGHHHHHHHHHHCT-TCEEEEES---SC----C-------------HHHHHHHHHHTCCEEEESHHHHT
T ss_pred --ccchHHHHHHHHHHHhcc-CCeEEEEC---CC----C-------------HHHHHHHHHcCCCEEEEeHHHhC
Confidence 233 47888889998775 57788776 11 0 23444456799997653 34553
No 52
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=74.27 E-value=34 Score=34.02 Aligned_cols=154 Identities=13% Similarity=0.107 Sum_probs=92.8
Q ss_pred CchhHHHHHHHHHhhcCCceeEEecccc-CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHH
Q 008423 31 TADLTLDIANRMQNTICVETMMHLTCTN-MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKH 109 (566)
Q Consensus 31 ~~~~Sl~la~~lq~~~Gle~i~HLTCrd-~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~ 109 (566)
+....++++..+++...++++. ++--| .-...++..+..+.++|++-+++. |.| +....++++.
T Consensus 75 ~~~~~~~~v~~ir~~~~~Pii~-m~y~n~v~~~g~~~f~~~~~~aG~dGviv~--Dl~------------~ee~~~~~~~ 139 (271)
T 1ujp_A 75 SVQGALELVREVRALTEKPLFL-MTYLNPVLAWGPERFFGLFKQAGATGVILP--DLP------------PDEDPGLVRL 139 (271)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEE-ECCHHHHHHHCHHHHHHHHHHHTCCEEECT--TCC------------GGGCHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEec--CCC------------HHHHHHHHHH
Confidence 3345678888888776777666 43223 123356888999999999988864 433 2346677777
Q ss_pred HHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHH--HcCCcEEEeccCCC------HHHHHHHHHHHH
Q 008423 110 IRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKV--DAGADLIITQLFYD------TDMFLKFVNDCR 181 (566)
Q Consensus 110 Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv--dAGAdFiITQlffD------~d~f~~f~~~~R 181 (566)
+++ +|-. .| .-..|.. . .+++++-. ..|-.+++|=.-+- .+...++++++|
T Consensus 140 ~~~-~gl~-~i-~liap~s------~------------~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr 198 (271)
T 1ujp_A 140 AQE-IGLE-TV-FLLAPTS------T------------DARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIK 198 (271)
T ss_dssp HHH-HTCE-EE-CEECTTC------C------------HHHHHHHHTTCCSCEEEECC------------CCHHHHHHHH
T ss_pred HHH-cCCc-eE-EEeCCCC------C------------HHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHH
Confidence 765 4421 12 1122321 1 22333333 34445555422121 123357889999
Q ss_pred HcCCCCcEEeeecccCCHHHHHHHhcc-CCCCCCHHHHHHhCC
Q 008423 182 QIGITCPIVPGIMPINNYKGFLRMTGF-CKTKIPAEITAALEP 223 (566)
Q Consensus 182 ~~Gi~vPIIpGImPI~s~~~~~r~~~l-~Gv~VP~~il~~Le~ 223 (566)
+.. ++||+.|. .|.|..++.++ .. -|+-|=..|.+.+++
T Consensus 199 ~~~-~~Pv~vGf-GI~t~e~a~~~-~~ADgVIVGSAi~~~~~~ 238 (271)
T 1ujp_A 199 ART-ALPVAVGF-GVSGKATAAQA-AVADGVVVGSALVRALEE 238 (271)
T ss_dssp TTC-CSCEEEES-CCCSHHHHHHH-TTSSEEEECHHHHHHHHT
T ss_pred hhc-CCCEEEEc-CCCCHHHHHHh-cCCCEEEEChHHhcccch
Confidence 874 79999996 79999999887 43 357788888888753
No 53
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=73.40 E-value=29 Score=35.25 Aligned_cols=147 Identities=16% Similarity=0.199 Sum_probs=94.8
Q ss_pred hhHHHHHHHHHhhc-CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC---Ccc----ccCCCcccHH
Q 008423 33 DLTLDIANRMQNTI-CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD---KFV----QIQGGFACAL 104 (566)
Q Consensus 33 ~~Sl~la~~lq~~~-Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~---~~~----~~~~~F~~A~ 104 (566)
+-.++++..+.-.. .++++..+..+|--+ .....|+..+++|+.-++= .|.-+- .+. +..-.|..=+
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~~-~~g~~Le~lk~~Gf~Gv~N----~ptvglidG~fr~~LEE~gm~~~~ev 153 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPFM-VMSTFLRELKEIGFAGVQN----FPTVGLIDGLFRQNLEETGMSYAQEV 153 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTTC-CHHHHHHHHHHHTCCEEEE----CSCGGGCCHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCCc-CHHHHHHHHHHhCCceEEE----CCCcccccchhhhhHhhcCCCHHHHH
Confidence 45677777666544 788889966665543 5667777788888887741 221110 000 1122344445
Q ss_pred HHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC---------------C
Q 008423 105 DLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY---------------D 169 (566)
Q Consensus 105 dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff---------------D 169 (566)
++|+..++ .+ -|++.++.+|+ +-+ +-.+||||.|+-.+-. |
T Consensus 154 e~I~~A~~-~g-L~Ti~~v~~~e-------------------eA~---amA~agpDiI~~h~glT~gglIG~~~avs~~~ 209 (286)
T 2p10_A 154 EMIAEAHK-LD-LLTTPYVFSPE-------------------DAV---AMAKAGADILVCHMGLTTGGAIGARSGKSMDD 209 (286)
T ss_dssp HHHHHHHH-TT-CEECCEECSHH-------------------HHH---HHHHHTCSEEEEECSCC---------CCCHHH
T ss_pred HHHHHHHH-CC-CeEEEecCCHH-------------------HHH---HHHHcCCCEEEECCCCCCCCcccCCCcccHHH
Confidence 55555554 33 48888887663 233 3357999999888872 2
Q ss_pred -HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc
Q 008423 170 -TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF 208 (566)
Q Consensus 170 -~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l 208 (566)
++...++.+.+++..-++-|+.+==||.+.+...++.++
T Consensus 210 ~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 210 CVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDS 249 (286)
T ss_dssp HHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhc
Confidence 667888999999887788777776699998877766554
No 54
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=72.83 E-value=32 Score=33.83 Aligned_cols=151 Identities=11% Similarity=0.004 Sum_probs=77.3
Q ss_pred hhccCC-CcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEecc-------------ccCCH-HHHHHHHHHHHH-c
Q 008423 11 TAWWPT-TRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTC-------------TNMPV-EKIDHALQTIKS-N 74 (566)
Q Consensus 11 ~~~~~~-~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTC-------------rd~n~-~~L~~~L~~a~~-~ 74 (566)
.++... .++.|--+. .+..+..++..+++ .+++.+.-.+. ...+. .+.......+.+ .
T Consensus 74 ~~l~~~~~v~~iiG~~-----~s~~~~~~~~~~~~-~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~ 147 (366)
T 3td9_A 74 ARAIDKEKVLAIIGEV-----ASAHSLAIAPIAEE-NKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNL 147 (366)
T ss_dssp HHHHHTSCCSEEEECS-----SHHHHHHHHHHHHH-TTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHTS
T ss_pred HHHhccCCeEEEEccC-----CchhHHHHHHHHHh-CCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHhc
Confidence 344444 366653222 23345556666654 67776643211 11122 233333444434 6
Q ss_pred CCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHHHHH
Q 008423 75 GIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLYLKK 153 (566)
Q Consensus 75 GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~ 153 (566)
|.++|.+|.+.... + ....+..+.+.++ +.|. +| ... |+.+.. +. ...+.+|+
T Consensus 148 g~~~iaii~~~~~~---~------~~~~~~~~~~~~~-~~G~--~v~~~~-~~~~~~---d~---------~~~~~~l~- 201 (366)
T 3td9_A 148 GAKRVVVFTDVEQD---Y------SVGLSNFFINKFT-ELGG--QVKRVF-FRSGDQ---DF---------SAQLSVAM- 201 (366)
T ss_dssp CCCEEEEEEETTCH---H------HHHHHHHHHHHHH-HTTC--EEEEEE-ECTTCC---CC---------HHHHHHHH-
T ss_pred CCcEEEEEEeCCCc---H------HHHHHHHHHHHHH-HCCC--EEEEEE-eCCCCc---cH---------HHHHHHHH-
Confidence 99999999652110 0 0011222333343 3453 33 233 665422 22 24455454
Q ss_pred HHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCC
Q 008423 154 KVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINN 198 (566)
Q Consensus 154 KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s 198 (566)
++++|.|+. +.+.+....+++.+++.|+++|++. .....+
T Consensus 202 --~~~~d~v~~--~~~~~~a~~~~~~~~~~g~~~~~~~-~~~~~~ 241 (366)
T 3td9_A 202 --SFNPDAIYI--TGYYPEIALISRQARQLGFTGYILA-GDGADA 241 (366)
T ss_dssp --HTCCSEEEE--CSCHHHHHHHHHHHHHTTCCSEEEE-CGGGCS
T ss_pred --hcCCCEEEE--ccchhHHHHHHHHHHHcCCCceEEe-eCCcCC
Confidence 468998886 3445566789999999999999764 333433
No 55
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=72.46 E-value=44 Score=33.61 Aligned_cols=129 Identities=12% Similarity=0.133 Sum_probs=77.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++ +
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~G-t---tGE~---~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~--------~-- 95 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSG-T---TGES---PTTTDGEKIELLRAVLEAVGDRARVIAGAGTY--------D-- 95 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS--------C--
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc-c---ccch---hhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCC--------C--
Confidence 4889999999999999999999774 1 1221 1122333566777766654433 33343321 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++ .++||+.==.|- .+|+.
T Consensus 96 -------t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~ 156 (304)
T 3l21_A 96 -------TAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADA-TELPMLLYDIPG-----------RSAVP 156 (304)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTS-CSSCEEEEECHH-----------HHSSC
T ss_pred -------HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCcc-----------ccCCC
Confidence 1244555555556899964 444555 467777777777665 378987544332 13666
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+.+.+|..
T Consensus 157 l~~~~~~~La~ 167 (304)
T 3l21_A 157 IEPDTIRALAS 167 (304)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHhc
Confidence 66666666643
No 56
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=72.44 E-value=88 Score=31.82 Aligned_cols=185 Identities=15% Similarity=0.145 Sum_probs=112.9
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-cCCCcccHHHHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ-IQGGFACALDLVKHIR 111 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~-~~~~F~~A~dLVk~Ir 111 (566)
+.-+..+..+.+...++++.=+-.---+.+.+.+....+.++|+.-|-+=.|..|+.-.+-.. .--.....++-|+.++
T Consensus 75 ~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~ 154 (305)
T 3ih1_A 75 TEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIK 154 (305)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHH
Confidence 344555666666567777776665323667777888888899999998766655542111000 0112234567777777
Q ss_pred HHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEe
Q 008423 112 SAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVP 191 (566)
Q Consensus 112 ~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIp 191 (566)
+. +..|.|=+-.--.. ....++-+++.+.=.+||||.|+--..-+.+.+.++.+.+ ++|++.
T Consensus 155 ~A-~~~~~I~ARtda~~------------~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~-----~~P~~~ 216 (305)
T 3ih1_A 155 EV-APSLYIVARTDARG------------VEGLDEAIERANAYVKAGADAIFPEALQSEEEFRLFNSKV-----NAPLLA 216 (305)
T ss_dssp HH-CTTSEEEEEECCHH------------HHCHHHHHHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS-----CSCBEE
T ss_pred Hc-CCCeEEEEeecccc------------ccCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc-----CCCEEE
Confidence 66 54565543321110 0123477999999999999999988888888888877664 478764
Q ss_pred -----eecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 192 -----GIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 192 -----GImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
|-.|..|.+.+..+ -+.-+.+|...+... +.-+.+..++|++.|
T Consensus 217 n~~~~g~tp~~~~~eL~~l-Gv~~v~~~~~~~raa--------------~~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 217 NMTEFGKTPYYSAEEFANM-GFQMVIYPVTSLRVA--------------AKAYENVFTLIKETG 265 (305)
T ss_dssp ECCTTSSSCCCCHHHHHHT-TCSEEEECSHHHHHH--------------HHHHHHHHHHHHHHS
T ss_pred eecCCCCCCCCCHHHHHHc-CCCEEEEchHHHHHH--------------HHHHHHHHHHHHhcC
Confidence 34466676666542 233355665554432 233456667777655
No 57
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=72.31 E-value=49 Score=33.57 Aligned_cols=115 Identities=15% Similarity=0.230 Sum_probs=65.1
Q ss_pred HHHHHHHhhcCCceeEEec--------------------------cccCCHHHHHHH-------HHHHHHcCCCEEEEec
Q 008423 37 DIANRMQNTICVETMMHLT--------------------------CTNMPVEKIDHA-------LQTIKSNGIQNVLALR 83 (566)
Q Consensus 37 ~la~~lq~~~Gle~i~HLT--------------------------Crd~n~~~L~~~-------L~~a~~~GIrNILaLr 83 (566)
.++..++. .|-..+++|. .+-|+.++|++. ...|+++|++-|=+=.
T Consensus 87 ~~~~~vh~-~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~ 165 (338)
T 1z41_A 87 KLTEQVKE-QGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHA 165 (338)
T ss_dssp HHHHHHHH-TTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHh-cCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecc
Confidence 44555564 6878888875 455676666544 3344678998886544
Q ss_pred CC---------CCC--CCCCccc-cCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHH
Q 008423 84 GD---------PPH--GQDKFVQ-IQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYL 151 (566)
Q Consensus 84 GD---------pp~--~~~~~~~-~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~L 151 (566)
|- |-. ..+.|-. .........++|+.||+.. .|.|+|=..|...-+. .. +. .+..++
T Consensus 166 ~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v--~~pv~vris~~~~~~~-g~-------~~-~~~~~~ 234 (338)
T 1z41_A 166 AHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW--DGPLFVRVSASDYTDK-GL-------DI-ADHIGF 234 (338)
T ss_dssp CTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC--CSCEEEEEECCCCSTT-SC-------CH-HHHHHH
T ss_pred ccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc--CCcEEEEecCcccCCC-CC-------CH-HHHHHH
Confidence 42 211 1111100 0112334788899999887 4788888777532111 11 11 345555
Q ss_pred HHHH-HcCCcEEE
Q 008423 152 KKKV-DAGADLII 163 (566)
Q Consensus 152 k~Kv-dAGAdFiI 163 (566)
.+++ ++|+|+|-
T Consensus 235 a~~l~~~Gvd~i~ 247 (338)
T 1z41_A 235 AKWMKEQGVDLID 247 (338)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEE
Confidence 5554 68999875
No 58
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=72.18 E-value=8.4 Score=37.46 Aligned_cols=111 Identities=12% Similarity=0.076 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCcc
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNE 142 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~ 142 (566)
.+++.|..+.++||...++....|..................+.+..+.+.+++.| +|++..|-..+
T Consensus 36 ~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~p~r~-~~~~~~p~~~~------------ 102 (307)
T 2f6k_A 36 TPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKSLAQQYPDQL-GYLASLPIPYE------------ 102 (307)
T ss_dssp CHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHHHHHHCTTTE-EEEECCCTTCH------------
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHHHHHHHhCccce-eEEEeCCCCCH------------
Confidence 35677888899999998876544321100000000000111222222334577655 78888773221
Q ss_pred chHHHHHHHHHHH-HcCCcEEEeccC-----CCHHHHHHHHHHHHHcCCCCcEE
Q 008423 143 SYQSDLLYLKKKV-DAGADLIITQLF-----YDTDMFLKFVNDCRQIGITCPIV 190 (566)
Q Consensus 143 ~~~~dl~~Lk~Kv-dAGAdFiITQlf-----fD~d~f~~f~~~~R~~Gi~vPII 190 (566)
+..++.|++=+ +.|+.-|...+- .+-+.|..+++.|++.| +||+
T Consensus 103 --~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~--lpv~ 152 (307)
T 2f6k_A 103 --LDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQ--AIVA 152 (307)
T ss_dssp --HHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTT--CEEE
T ss_pred --HHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcC--CeEE
Confidence 12334444433 358776655443 24467889999999988 5554
No 59
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=72.06 E-value=42 Score=33.99 Aligned_cols=129 Identities=8% Similarity=0.103 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++.. .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----TGE~---~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~s---------- 103 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGT----TGES---ATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANS---------- 103 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSG----GGTG---GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcC----------
Confidence 48899999999999999999997641 1211 1112223456777766554333 334443321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++- ++||+.==.|- .+|+.
T Consensus 104 -------t~eai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P~-----------~tg~~ 164 (314)
T 3qze_A 104 -------TREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV-AIPQILYNVPG-----------RTSCD 164 (314)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS-CSCEEEEECHH-----------HHSCC
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeCcc-----------ccCCC
Confidence 2244555555557899964 444555 5677777777776643 68987544332 13566
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+.+.+|..
T Consensus 165 l~~~~~~~La~ 175 (314)
T 3qze_A 165 MLPETVERLSK 175 (314)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHhc
Confidence 66666666543
No 60
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=71.81 E-value=88 Score=31.88 Aligned_cols=109 Identities=9% Similarity=0.067 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++...+.|++.|+++.. .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----TGE~---~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~s---------- 114 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGS----TGIY---MYLTREERRRAIEAAATILRGRRTLMAGIGALR---------- 114 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESST----TTTG---GGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC----------
Confidence 58899999999999999999997741 1221 1122233566777766654333 334444321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEee
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.=
T Consensus 115 -------t~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a-~~lPiilY 166 (332)
T 2r8w_A 115 -------TDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGA-TALPLAIY 166 (332)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHH-CSSCEEEE
T ss_pred -------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEE
Confidence 1234454555556899964 556666 667788877776654 36888643
No 61
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=71.55 E-value=50 Score=32.68 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=57.2
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeE-EEEecCCCCCCCCCCCCCCCcc
Q 008423 64 IDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGI-TVAGYPEGHPDTIGPDGVASNE 142 (566)
Q Consensus 64 L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~ 142 (566)
.......+.+.|.++|.+|..|.+.+ -..+..+.+.++ +.| .+| +...||.+.. +.
T Consensus 130 ~~~~~~~l~~~g~~~vaii~~~~~~g----------~~~~~~~~~~~~-~~G--~~v~~~~~~~~~~~---d~------- 186 (379)
T 3n0w_A 130 VKTVVQAQLAKGYKTWFLMLPDAAYG----------DLMNAAIRRELT-AGG--GQIVGSVRFPFETQ---DF------- 186 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESSHHH----------HHHHHHHHHHHH-HHT--CEEEEEEEECTTCC---CC-------
T ss_pred HHHHHHHHHHcCCcEEEEEecccchh----------HHHHHHHHHHHH-HcC--CEEEEEEeCCCCCC---CH-------
Confidence 33444455677999999995432210 001222223333 344 233 3446675532 22
Q ss_pred chHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCc--EEeee
Q 008423 143 SYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCP--IVPGI 193 (566)
Q Consensus 143 ~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vP--IIpGI 193 (566)
...+.+++ ++++|.|+. +-+......+++.+++.|++.| ++.|.
T Consensus 187 --~~~l~~i~---~~~~d~v~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (379)
T 3n0w_A 187 --SSYLLQAK---ASGAQLIVS--TSGGAANINIMKQAREFGLPSKTQKVGGM 232 (379)
T ss_dssp --HHHHHHHH---HHTCSEEEE--CCCHHHHHHHHHHHHHTTCSCSSCEEECC
T ss_pred --HHHHHHHH---HCCCCEEEE--ecccchHHHHHHHHHHcCCCCCCcEEEec
Confidence 24455554 368998876 3455667789999999999988 55543
No 62
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=71.47 E-value=35 Score=33.96 Aligned_cols=126 Identities=15% Similarity=0.156 Sum_probs=76.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
..+.+.+.+.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+. .-+|+.++-
T Consensus 15 ~iD~~~l~~lv~~li~~Gv~gl~v~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~----------- 75 (286)
T 2r91_A 15 RLDPELFANHVKNITSKGVDVVFVAG-T---TGLG---PALSLQEKMELTDAATSAARR-VIVQVASLN----------- 75 (286)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEETS-T---TTTG---GGSCHHHHHHHHHHHHHHCSS-EEEECCCSS-----------
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCC-EEEeeCCCC-----------
Confidence 35889999999999999999998764 2 1221 112233456778887766554 444544321
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEE-EeccCCC----HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLI-ITQLFYD----TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlffD----~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++|. .+.+.+|.+.+-++ .++||+.==.|- .+|+.
T Consensus 76 ------t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~ 137 (286)
T 2r91_A 76 ------ADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA-VSIPVFLYNYPA-----------AVGRD 137 (286)
T ss_dssp ------HHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH-CSSCEEEEECHH-----------HHSSC
T ss_pred ------HHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeChh-----------hcCCC
Confidence 2244555555567899954 4556654 46677777776654 268887543332 13566
Q ss_pred CCHHHHHH
Q 008423 213 IPAEITAA 220 (566)
Q Consensus 213 VP~~il~~ 220 (566)
++.+.+.+
T Consensus 138 l~~~~~~~ 145 (286)
T 2r91_A 138 VDARAAKE 145 (286)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHh
Confidence 66665554
No 63
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=71.40 E-value=88 Score=32.94 Aligned_cols=104 Identities=21% Similarity=0.302 Sum_probs=62.2
Q ss_pred cHHHHHHHHHHHcC--CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--EeccC----------
Q 008423 102 CALDLVKHIRSAYG--DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--ITQLF---------- 167 (566)
Q Consensus 102 ~A~dLVk~Ir~~~g--d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--ITQlf---------- 167 (566)
.-.+|++.|++.++ ....|.+.++|..- +. +.++.|+ ++|.+.+ =-|-+
T Consensus 122 ~l~~ll~~i~~~~~~~~~~eitie~~p~~l----~~----------e~l~~L~---~~G~~rislGvQS~~~~~l~~i~R 184 (457)
T 1olt_A 122 QISRLMKLLRENFQFNADAEISIEVDPREI----EL----------DVLDHLR---AEGFNRLSMGVQDFNKEVQRLVNR 184 (457)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEEEEECSSSC----CT----------HHHHHHH---HTTCCEEEEEEECCCHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEccCcC----CH----------HHHHHHH---HcCCCEEEEeeccCCHHHHHHhCC
Confidence 46778888887654 22456666666532 21 3444444 4787643 12322
Q ss_pred -CCHHHHHHHHHHHHHcCCC---CcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Q 008423 168 -YDTDMFLKFVNDCRQIGIT---CPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMC 243 (566)
Q Consensus 168 -fD~d~f~~f~~~~R~~Gi~---vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i 243 (566)
++.+.+.+-++.+|++|+. +-+|.|+ |=+|...+ .+.+
T Consensus 185 ~~~~~~~~~ai~~~r~~G~~~v~~dlI~Gl-Pget~e~~-------------------------------------~~tl 226 (457)
T 1olt_A 185 EQDEEFIFALLNHAREIGFTSTNIDLIYGL-PKQTPESF-------------------------------------AFTL 226 (457)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSCEEEEEESC-TTCCHHHH-------------------------------------HHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcEEEEEEcCC-CCCCHHHH-------------------------------------HHHH
Confidence 5677888888999998865 3345664 33443222 2444
Q ss_pred HHHHHcCCCeEEEEcCC
Q 008423 244 KKILAHGIKTLHLYTLN 260 (566)
Q Consensus 244 ~~L~~~Gv~GiHfyTlN 260 (566)
+.+.+.+++++++|.+.
T Consensus 227 ~~~~~l~~~~i~~y~l~ 243 (457)
T 1olt_A 227 KRVAELNPDRLSVFNYA 243 (457)
T ss_dssp HHHHHHCCSEEEEEECC
T ss_pred HHHHhcCcCEEEeecCc
Confidence 55566789999999765
No 64
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=70.89 E-value=31 Score=32.33 Aligned_cols=172 Identities=11% Similarity=0.129 Sum_probs=89.1
Q ss_pred hhccCCCcCEEEecCCCCCC-CchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 008423 11 TAWWPTTRHSATSRWGAGGS-TADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHG 89 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwgagG~-~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~ 89 (566)
..+.....+++.|+...+.. .....++++..+.+..+++++.|...++ .+.+ ..+.++|+.-|.+-+....
T Consensus 40 ~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~--~~~~----~~~~~~Gad~V~i~~~~~~-- 111 (253)
T 1h5y_A 40 VRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRS--LEDA----TTLFRAGADKVSVNTAAVR-- 111 (253)
T ss_dssp HHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCS--HHHH----HHHHHHTCSEEEESHHHHH--
T ss_pred HHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCC--HHHH----HHHHHcCCCEEEEChHHhh--
Confidence 34445567877777543322 2334677777888778888888766543 3333 4455578887774432110
Q ss_pred CCCccccCCCcccHHHHHHHHHHHcCC-ceeEEEEec--C-------CCCCCCCCCCCCCCccchHHHHHHHHHHHHcCC
Q 008423 90 QDKFVQIQGGFACALDLVKHIRSAYGD-YFGITVAGY--P-------EGHPDTIGPDGVASNESYQSDLLYLKKKVDAGA 159 (566)
Q Consensus 90 ~~~~~~~~~~F~~A~dLVk~Ir~~~gd-~F~IGVAgy--P-------EgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGA 159 (566)
. .++++.+.+.++. ...+++... | .+-.+..+. ..++.+++=.++||
T Consensus 112 ------------~-~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~----------~~~e~~~~~~~~G~ 168 (253)
T 1h5y_A 112 ------------N-PQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGL----------DAVKWAKEVEELGA 168 (253)
T ss_dssp ------------C-THHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEE----------EHHHHHHHHHHHTC
T ss_pred ------------C-cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCC----------CHHHHHHHHHhCCC
Confidence 0 1234444455653 345555543 1 111100000 12333444456799
Q ss_pred cEEEecc--------CCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHHHH
Q 008423 160 DLIITQL--------FYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEITA 219 (566)
Q Consensus 160 dFiITQl--------ffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~il~ 219 (566)
|+|+... -++.+.+ +++++. .++||+++ -.|.+...+.++.+ ..|+-+-..+.+
T Consensus 169 d~i~~~~~~~~g~~~~~~~~~i----~~l~~~-~~~pvia~-GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 169 GEILLTSIDRDGTGLGYDVELI----RRVADS-VRIPVIAS-GGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp SEEEEEETTTTTTCSCCCHHHH----HHHHHH-CSSCEEEE-SCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CEEEEecccCCCCcCcCCHHHH----HHHHHh-cCCCEEEe-CCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 9986422 2355554 344443 36888753 34555555554432 455667766643
No 65
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=70.87 E-value=50 Score=37.05 Aligned_cols=139 Identities=16% Similarity=0.220 Sum_probs=79.3
Q ss_pred ccCCHHHHHHHH-------HHHHHcCCCEEEEecCC---------CCC--CCCCcc-ccCCCcccHHHHHHHHHHHcCCc
Q 008423 57 TNMPVEKIDHAL-------QTIKSNGIQNVLALRGD---------PPH--GQDKFV-QIQGGFACALDLVKHIRSAYGDY 117 (566)
Q Consensus 57 rd~n~~~L~~~L-------~~a~~~GIrNILaLrGD---------pp~--~~~~~~-~~~~~F~~A~dLVk~Ir~~~gd~ 117 (566)
+-|+.++|++.+ ..|+++|++-|=+-.|- |-. -.+.|- ...+....+.++|+.||+..|++
T Consensus 137 ~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~ 216 (729)
T 1o94_A 137 KEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSD 216 (729)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCC
Confidence 445665555443 34467899988866554 211 112110 01122345888999999999888
Q ss_pred eeEEEEecCCCCC--CCCCCCCCCCccchHHHHHHHHHHHHcCCcEE-Ee-------------ccCCCHHHHHHHHHHHH
Q 008423 118 FGITVAGYPEGHP--DTIGPDGVASNESYQSDLLYLKKKVDAGADLI-IT-------------QLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 118 F~IGVAgyPEgHp--e~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-IT-------------QlffD~d~f~~f~~~~R 181 (566)
|-|++=..|...- ...+.. .+...+.+.++.|+|++ ++ +.+.....+..+.+.+|
T Consensus 217 ~pv~vrls~~~~~~~~G~~~~---------~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 287 (729)
T 1o94_A 217 CAIATRFGVDTVYGPGQIEAE---------VDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVK 287 (729)
T ss_dssp SEEEEEEEEECSSCTTSCCTT---------THHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHH
T ss_pred ceEEEEEccccCcCCCCCCch---------HHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHH
Confidence 9899888774321 111101 34555677777789976 22 22222222356777777
Q ss_pred HcCCCCcEEeeecccCCHHHHHHHh
Q 008423 182 QIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 182 ~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
++ .++|||. .=-|.+...+..+.
T Consensus 288 ~~-~~~pvi~-~G~i~~~~~a~~~l 310 (729)
T 1o94_A 288 QV-SKKPVLG-VGRYTDPEKMIEIV 310 (729)
T ss_dssp TT-CSSCEEC-CSCCCCHHHHHHHH
T ss_pred HH-CCCEEEE-eCCCCCHHHHHHHH
Confidence 75 5789764 23456666665554
No 66
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=70.32 E-value=16 Score=37.96 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=26.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 91 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~ 91 (566)
..+++..++.|++|.++|++.|+ |+=|.|..+.
T Consensus 131 ~~d~~~~~~l~~ra~~aG~~alv-lTvD~p~~g~ 163 (352)
T 3sgz_A 131 KSDWDFNKQMVQRAEALGFKALV-ITIDTPVLGN 163 (352)
T ss_dssp CSCHHHHHHHHHHHHHTTCCCEE-EECSCSSCCC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE-EEeCCCCCCc
Confidence 45888999999999999997665 8889886553
No 67
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=70.29 E-value=46 Score=33.51 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCcee--EEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFG--ITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~--IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++.. .|+. ..-..+.=.++++.+.+..+...- +|+.++ +
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----TGE~---~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~--------~-- 94 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGS----NGEF---PFLTSSERLEVVSRVRQAMPKNRLLLAGSGCE--------S-- 94 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSG----GGTG---GGSCHHHHHHHHHHHHHTSCTTSEEEEECCCS--------S--
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----ccch---hhCCHHHHHHHHHHHHHHcCCCCcEEEecCCC--------C--
Confidence 48899999999999999999997741 1111 111222346678877765543332 333221 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEEE-eccCC-----CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLII-TQLFY-----DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCK 210 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFiI-TQlff-----D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~G 210 (566)
.++-++..+.=.++|||.++ .-++| +.+.+.++.+.+.++ .++||+.==.|- .+|
T Consensus 95 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a-~~lPiilYn~P~-----------~tg 155 (307)
T 3s5o_A 95 -------TQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADL-SPIPVVLYSVPA-----------NTG 155 (307)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHH-CSSCEEEEECHH-----------HHS
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhh-cCCCEEEEeCCc-----------ccC
Confidence 22445555555568999643 34544 567788887777665 368887543332 246
Q ss_pred CCCCHHHHHHhCC
Q 008423 211 TKIPAEITAALEP 223 (566)
Q Consensus 211 v~VP~~il~~Le~ 223 (566)
+.++.+.+.+|..
T Consensus 156 ~~l~~~~~~~La~ 168 (307)
T 3s5o_A 156 LDLPVDAVVTLSQ 168 (307)
T ss_dssp CCCCHHHHHHHHT
T ss_pred CCCCHHHHHHHhc
Confidence 6777776666643
No 68
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=70.23 E-value=36 Score=33.97 Aligned_cols=109 Identities=6% Similarity=0.024 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~---------- 81 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVG-T---TGES---ATLNHDEHADVVMMTLDLADGRIPVIAGTGANA---------- 81 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccch---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCcc----------
Confidence 5889999999999999999999764 2 1221 1122233566777766544322 344444321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEee
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.=
T Consensus 82 -------t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilY 133 (292)
T 2ojp_A 82 -------TAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEH-TDLPQILY 133 (292)
T ss_dssp -------HHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTT-CSSCEEEE
T ss_pred -------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEE
Confidence 1234554555556899954 445665 677788888777654 36888643
No 69
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=70.02 E-value=36 Score=34.49 Aligned_cols=127 Identities=9% Similarity=0.115 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~G-t---TGE~---~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~---------- 104 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLG-S---TGEG---AYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLT---------- 104 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSS-G---GGTG---GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC----------
Confidence 4889999999999999999999663 1 1211 1112233566777766654333 344443321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++ .++||+.==.|- .+|+.
T Consensus 105 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~ 165 (315)
T 3na8_A 105 -------TAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEA-IGVPVMLYNNPG-----------TSGID 165 (315)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEECHH-----------HHSCC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCcEEEEeCcc-----------hhCcC
Confidence 2244555555557899964 444554 567778877777664 358887544332 24677
Q ss_pred CCHHHHHHh
Q 008423 213 IPAEITAAL 221 (566)
Q Consensus 213 VP~~il~~L 221 (566)
++.+++.+|
T Consensus 166 l~~~~~~~L 174 (315)
T 3na8_A 166 MSVELILRI 174 (315)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 777777776
No 70
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=69.91 E-value=39 Score=33.81 Aligned_cols=129 Identities=12% Similarity=0.110 Sum_probs=75.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
..+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~--------- 80 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPVG-T---TGES---PTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNN--------- 80 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECSS-G---GGTG---GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS---------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECc-c---ccch---hhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCC---------
Confidence 35889999999999999999998653 1 1111 1112223566777766543322 344444321
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|-. +|+
T Consensus 81 --------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~~-----------tg~ 140 (297)
T 2rfg_A 81 --------PVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDA-IDIPIIVYNIPPR-----------AVV 140 (297)
T ss_dssp --------HHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHH-CSSCEEEEECHHH-----------HSC
T ss_pred --------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCccc-----------cCC
Confidence 1234555555556899964 445666 677788887777654 3688865433321 355
Q ss_pred CCCHHHHHHhC
Q 008423 212 KIPAEITAALE 222 (566)
Q Consensus 212 ~VP~~il~~Le 222 (566)
.++.+.+.+|.
T Consensus 141 ~l~~~~~~~La 151 (297)
T 2rfg_A 141 DIKPETMARLA 151 (297)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 55655555553
No 71
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=69.64 E-value=92 Score=30.90 Aligned_cols=143 Identities=15% Similarity=0.101 Sum_probs=87.7
Q ss_pred cCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEec---CCCCCCCCCcccc-----CCCcc--cHHHHHHHHHHHcC
Q 008423 46 ICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR---GDPPHGQDKFVQI-----QGGFA--CALDLVKHIRSAYG 115 (566)
Q Consensus 46 ~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLr---GDpp~~~~~~~~~-----~~~F~--~A~dLVk~Ir~~~g 115 (566)
-..-.++++||-+-+.+...+.+..+.+.|++=|= |. -||-.+|..=+.. ..+++ ...++|+.+|+.+.
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iE-lgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~ 94 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALE-LGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP 94 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEE-EECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEE-ECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 34567999999999999999999999999997665 32 3443332110000 01222 23678888887632
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe-ccCCCHHHHHHHHHHHHHcCCCCcEEeeec
Q 008423 116 DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT-QLFYDTDMFLKFVNDCRQIGITCPIVPGIM 194 (566)
Q Consensus 116 d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-QlffD~d~f~~f~~~~R~~Gi~vPIIpGIm 194 (566)
..-|.+-+|-+-- . .. ...+++++=.+||+|-+|. -+-+ +...+|.+.|++.|++ .++=+.
T Consensus 95 -~~Pivlm~Y~npv-~--~~----------g~e~f~~~~~~aGvdgvii~Dlp~--ee~~~~~~~~~~~gl~--~i~lia 156 (267)
T 3vnd_A 95 -DMPIGLLLYANLV-F--AN----------GIDEFYTKAQAAGVDSVLIADVPV--EESAPFSKAAKAHGIA--PIFIAP 156 (267)
T ss_dssp -TCCEEEEECHHHH-H--HH----------CHHHHHHHHHHHTCCEEEETTSCG--GGCHHHHHHHHHTTCE--EECEEC
T ss_pred -CCCEEEEecCcHH-H--Hh----------hHHHHHHHHHHcCCCEEEeCCCCH--hhHHHHHHHHHHcCCe--EEEEEC
Confidence 2346666664310 0 00 0123445556889998554 3333 4567899999999965 455556
Q ss_pred ccCCHHHHHHHhc
Q 008423 195 PINNYKGFLRMTG 207 (566)
Q Consensus 195 PI~s~~~~~r~~~ 207 (566)
|-++...+.++++
T Consensus 157 P~t~~eri~~i~~ 169 (267)
T 3vnd_A 157 PNADADTLKMVSE 169 (267)
T ss_dssp TTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 7777776666654
No 72
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=69.59 E-value=50 Score=33.05 Aligned_cols=128 Identities=12% Similarity=0.066 Sum_probs=75.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCC-c--eeEEEEecCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGD-Y--FGITVAGYPEGHPDTIG 134 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd-~--F~IGVAgyPEgHpe~~~ 134 (566)
..+.+.+++.++...+.|++.|+++. - .|+. ..-..+.=.++++...+..+. . .-+|+.++
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~--------- 87 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVG-T---TGES---ATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSN--------- 87 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCS---------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCC---------
Confidence 34889999999999999999998663 1 1221 112223356677776665443 2 33333321
Q ss_pred CCCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCC
Q 008423 135 PDGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCK 210 (566)
Q Consensus 135 ~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~G 210 (566)
+.++-++..+.=.++|||.+ +..++| +.+.+.++.+.+-++- ++||+.==.|- .+|
T Consensus 88 --------~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~-~lPiilYn~P~-----------~tg 147 (301)
T 3m5v_A 88 --------ATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV-DIPVLLYNVPG-----------RTG 147 (301)
T ss_dssp --------SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-SSCEEEEECHH-----------HHS
T ss_pred --------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeCch-----------hhC
Confidence 12244555555556899963 444555 5677777777766543 68987443332 135
Q ss_pred CCCCHHHHHHh
Q 008423 211 TKIPAEITAAL 221 (566)
Q Consensus 211 v~VP~~il~~L 221 (566)
+.++.+.+.+|
T Consensus 148 ~~l~~~~~~~L 158 (301)
T 3m5v_A 148 CEISTDTIIKL 158 (301)
T ss_dssp CCCCHHHHHHH
T ss_pred cCCCHHHHHHH
Confidence 56666555555
No 73
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=69.49 E-value=55 Score=33.14 Aligned_cols=129 Identities=12% Similarity=0.174 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.=.++++...+..+.. .-+|+.++-
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~G-t---TGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~---------- 91 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILG-T---NAEA---FLLTREERAQLIATARKAVGPDFPIMAGVGAHS---------- 91 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESS-G---GGTG---GGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSS----------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC----------
Confidence 4889999999999999999999774 1 1111 1112223456777766654332 334443311
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcE--EEeccCC----CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADL--IITQLFY----DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCK 210 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdF--iITQlff----D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~G 210 (566)
.++-++..+.=.++|||. +++.++| +.+.+.+|.+.+.++ .++||+.==.|-.+ .|
T Consensus 92 -------t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a-~~lPiilYn~P~~t----------~g 153 (318)
T 3qfe_A 92 -------TRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQ-SPLPVVIYNFPGVC----------NG 153 (318)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHH-CSSCEEEEECCC--------------
T ss_pred -------HHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhh-CCCCEEEEeCCccc----------CC
Confidence 223444445555679995 3444355 356777777777664 36898754444321 14
Q ss_pred CCCCHHHHHHhC
Q 008423 211 TKIPAEITAALE 222 (566)
Q Consensus 211 v~VP~~il~~Le 222 (566)
+.++.+.+.+|.
T Consensus 154 ~~l~~~~~~~La 165 (318)
T 3qfe_A 154 IDLDSDMITTIA 165 (318)
T ss_dssp CCCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 555555555553
No 74
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=68.99 E-value=12 Score=37.31 Aligned_cols=128 Identities=12% Similarity=0.031 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcC-CCEEEEecCC-------CCCCCC------Ccc--cc
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNG-IQNVLALRGD-------PPHGQD------KFV--QI 96 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~G-IrNILaLrGD-------pp~~~~------~~~--~~ 96 (566)
+...++.+.+++..+++++.-++. +.+.+++.+....+.++| ++-|.+-.+. +..... ... ..
T Consensus 146 ~~~~~ii~~vr~~~~~Pv~vK~~~-~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg 224 (314)
T 2e6f_A 146 EAMRTYLQQVSLAYGLPFGVKMPP-YFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGG 224 (314)
T ss_dssp HHHHHHHHHHHHHHCSCEEEEECC-CCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEES
T ss_pred HHHHHHHHHHHHhcCCCEEEEECC-CCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCc
Confidence 345678888887778888877765 567888888888889999 8877644321 000000 000 00
Q ss_pred CCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--EeccCC-CHHHH
Q 008423 97 QGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--ITQLFY-DTDMF 173 (566)
Q Consensus 97 ~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--ITQlff-D~d~f 173 (566)
...+..+.++|+.+++..++---|++.+.- + .+...+.+.+|||.+ =|.+++ +++.+
T Consensus 225 ~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~-------~-------------~~da~~~l~~GAd~V~ig~~~l~~~p~~~ 284 (314)
T 2e6f_A 225 KYILPTALANVNAFYRRCPDKLVFGCGGVY-------S-------------GEDAFLHILAGASMVQVGTALQEEGPGIF 284 (314)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSEEEEESSCC-------S-------------HHHHHHHHHHTCSSEEECHHHHHHCTTHH
T ss_pred ccccHHHHHHHHHHHHhcCCCCEEEECCCC-------C-------------HHHHHHHHHcCCCEEEEchhhHhcCcHHH
Confidence 112345788999998876322233333311 1 223455567899976 578887 99888
Q ss_pred HHHHHHHH
Q 008423 174 LKFVNDCR 181 (566)
Q Consensus 174 ~~f~~~~R 181 (566)
.++.+.++
T Consensus 285 ~~i~~~l~ 292 (314)
T 2e6f_A 285 TRLEDELL 292 (314)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776654
No 75
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=68.90 E-value=44 Score=31.78 Aligned_cols=148 Identities=14% Similarity=0.187 Sum_probs=82.0
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccc-c-CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCT-N-MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHI 110 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCr-d-~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~I 110 (566)
...+++++.+++...++ .|+-.. + .-...+.+.+..+.++|++-|.+ ||-+. .....+++.+
T Consensus 66 ~~~~~~i~~i~~~~~~p--v~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~--~~~~~------------~~~~~~~~~~ 129 (248)
T 1geq_A 66 REAFWIVKEFRRHSSTP--IVLMTYYNPIYRAGVRNFLAEAKASGVDGILV--VDLPV------------FHAKEFTEIA 129 (248)
T ss_dssp HHHHHHHHHHHTTCCCC--EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE--TTCCG------------GGHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeccchhhhcCHHHHHHHHHHCCCCEEEE--CCCCh------------hhHHHHHHHH
Confidence 34578888888766665 333221 1 11123367888889999999886 44331 2356777778
Q ss_pred HHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCc-EEEe--ccC-------CCHHHHHHHHHHH
Q 008423 111 RSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGAD-LIIT--QLF-------YDTDMFLKFVNDC 180 (566)
Q Consensus 111 r~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAd-FiIT--Qlf-------fD~d~f~~f~~~~ 180 (566)
++ +|....+ +..|. +.. +.+ +++..++| |+.+ =.- +... ..++++++
T Consensus 130 ~~-~g~~~~~--~i~~~------t~~---------e~~----~~~~~~~d~~i~~~~~~G~~g~~~~~~~~-~~~~i~~l 186 (248)
T 1geq_A 130 RE-EGIKTVF--LAAPN------TPD---------ERL----KVIDDMTTGFVYLVSLYGTTGAREEIPKT-AYDLLRRA 186 (248)
T ss_dssp HH-HTCEEEE--EECTT------CCH---------HHH----HHHHHHCSSEEEEECCC-------CCCHH-HHHHHHHH
T ss_pred HH-hCCCeEE--EECCC------CHH---------HHH----HHHHhcCCCeEEEEECCccCCCCCCCChh-HHHHHHHH
Confidence 74 5644444 44332 110 222 33444566 6533 221 2232 34667777
Q ss_pred HHcCCCCcEEeeecccCCHHHHHHH--hccCCCCCCHHHHHHh
Q 008423 181 RQIGITCPIVPGIMPINNYKGFLRM--TGFCKTKIPAEITAAL 221 (566)
Q Consensus 181 R~~Gi~vPIIpGImPI~s~~~~~r~--~~l~Gv~VP~~il~~L 221 (566)
++.- ++||++|= .|.+...+..+ +-..|+.|-..+.+..
T Consensus 187 ~~~~-~~pi~~~G-GI~~~e~i~~~~~~Gad~vivGsai~~~~ 227 (248)
T 1geq_A 187 KRIC-RNKVAVGF-GVSKREHVVSLLKEGANGVVVGSALVKII 227 (248)
T ss_dssp HHHC-SSCEEEES-CCCSHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred Hhhc-CCCEEEEe-ecCCHHHHHHHHHcCCCEEEEcHHHHhhH
Confidence 7653 68887642 45554555444 2355666778887765
No 76
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=68.59 E-value=30 Score=32.97 Aligned_cols=176 Identities=11% Similarity=0.142 Sum_probs=84.0
Q ss_pred hccCCCcCEEEecCCCCC-CCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCC
Q 008423 12 AWWPTTRHSATSRWGAGG-STADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQ 90 (566)
Q Consensus 12 ~~~~~~p~fVsVTwgagG-~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~ 90 (566)
++.+...+++.+++...+ ......++++..+.+..+++++..--.+ +.+ .+..+.++|+.-|++-+.....
T Consensus 39 ~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~--~~~----~~~~~~~~Gad~V~lg~~~l~~-- 110 (252)
T 1ka9_F 39 AYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVR--SLE----DARKLLLSGADKVSVNSAAVRR-- 110 (252)
T ss_dssp HHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCC--SHH----HHHHHHHHTCSEEEECHHHHHC--
T ss_pred HHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcC--CHH----HHHHHHHcCCCEEEEChHHHhC--
Confidence 344445677777654322 2233456666777766676666532221 333 3444455688777654433211
Q ss_pred CCccccCCCcccHHHHHHHHHHHcC-CceeEEEEecCC-C--CCCCCCCCCCCCccchHHHHHHHHHHHHcCCc-EEEec
Q 008423 91 DKFVQIQGGFACALDLVKHIRSAYG-DYFGITVAGYPE-G--HPDTIGPDGVASNESYQSDLLYLKKKVDAGAD-LIITQ 165 (566)
Q Consensus 91 ~~~~~~~~~F~~A~dLVk~Ir~~~g-d~F~IGVAgyPE-g--Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAd-FiITQ 165 (566)
.++++.+++.++ +...+|+.+... | +-...+-.+ .... ...+.+++=.++||+ +++|.
T Consensus 111 -------------p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~-~~~~---~~~e~~~~~~~~G~~~i~~~~ 173 (252)
T 1ka9_F 111 -------------PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRV-PTGL---HAVEWAVKGVELGAGEILLTS 173 (252)
T ss_dssp -------------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTE-EEEE---EHHHHHHHHHHHTCCEEEEEE
T ss_pred -------------cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCcc-ccCC---cHHHHHHHHHHcCCCEEEEec
Confidence 123444555555 234566655321 1 000000000 0000 113344444568999 45563
Q ss_pred c-------CCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHHH
Q 008423 166 L-------FYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEIT 218 (566)
Q Consensus 166 l-------ffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~il 218 (566)
. -+|.+.+ +++++. .++||+++ -.|.+...+.++.+ ..|+-|=..++
T Consensus 174 ~~~~g~~~g~~~~~i----~~l~~~-~~ipvia~-GGI~~~~d~~~~~~~Gadgv~vgsal~ 229 (252)
T 1ka9_F 174 MDRDGTKEGYDLRLT----RMVAEA-VGVPVIAS-GGAGRMEHFLEAFQAGAEAALAASVFH 229 (252)
T ss_dssp TTTTTTCSCCCHHHH----HHHHHH-CSSCEEEE-SCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred ccCCCCcCCCCHHHH----HHHHHH-cCCCEEEe-CCCCCHHHHHHHHHCCCHHHHHHHHHH
Confidence 2 1344444 444443 36898764 45666666665543 34555665554
No 77
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=68.54 E-value=46 Score=33.22 Aligned_cols=142 Identities=8% Similarity=0.052 Sum_probs=77.1
Q ss_pred hhhcc-CCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEecc-----------ccC-CHHHHHHHHHHHHH-cC
Q 008423 10 WTAWW-PTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTC-----------TNM-PVEKIDHALQTIKS-NG 75 (566)
Q Consensus 10 ~~~~~-~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTC-----------rd~-n~~~L~~~L~~a~~-~G 75 (566)
..++. ...++.|-. . .+..+..++..+.+ .+++.+.--+. ... +..+....+..+.+ +|
T Consensus 68 ~~~li~~~~V~~iiG-~-----~s~~~~a~~~~~~~-~~iP~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g 140 (391)
T 3eaf_A 68 YREFRDRYGVIAIIG-W-----GTADTEKLSDQVDT-DKITYISASYSAKLLVKPFNFYPAPDYSTQACSGLAFLASEFG 140 (391)
T ss_dssp HHHHHHTTCCSEEEE-C-----CHHHHHHHHHHHHH-HTCEEEESCCCGGGTTSTTEECSSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhcCcEEEEE-c-----CcHHHHHHHHHHhh-cCCeEEecccchhhcCCCcEEEeCCCHHHHHHHHHHHHHHhcC
Confidence 34566 566777633 2 13345666666654 57776642111 011 22334444444455 59
Q ss_pred CCEEEEecC-CCCCCCCCccccCCCcccHHHHHHHHHH---HcCCceeEE-EEecCCCCCCCCCCCCCCCccchHHHHHH
Q 008423 76 IQNVLALRG-DPPHGQDKFVQIQGGFACALDLVKHIRS---AYGDYFGIT-VAGYPEGHPDTIGPDGVASNESYQSDLLY 150 (566)
Q Consensus 76 IrNILaLrG-Dpp~~~~~~~~~~~~F~~A~dLVk~Ir~---~~gd~F~IG-VAgyPEgHpe~~~~~~~~~~~~~~~dl~~ 150 (566)
.++|.+|.+ |.+ ++.++.+.+++ +.| ++|- ...|+.+. .+...
T Consensus 141 ~~~iaii~~~~~~--------------~g~~~~~~~~~~l~~~G--~~v~~~~~~~~~~----------------~d~~~ 188 (391)
T 3eaf_A 141 QGKLALAYDSKVA--------------YSRSPIGAIKKAAPSLG--LQVVGDYDLPLRA----------------TEADA 188 (391)
T ss_dssp SEEEEEEECTTCH--------------HHHTTHHHHHHHTGGGT--EEEEEEEECCTTC----------------CHHHH
T ss_pred CCEEEEEEecCCh--------------hHHHHHHHHHHHHHHcC--CceeeeeccCCCC----------------cCHHH
Confidence 999999986 432 12222333332 234 3432 23444332 12333
Q ss_pred HHHH--H-HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 151 LKKK--V-DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 151 Lk~K--v-dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
...| + ++++|.|+. +-+......+++.+++.|+++|++.+
T Consensus 189 ~~~~~~l~~~~~dav~~--~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (391)
T 3eaf_A 189 ERIAREMLAADPDYVWC--GNTISSCSLLGRAMAKVGLDAFLLTN 231 (391)
T ss_dssp HHHHHHHHTTCCSEEEE--CSCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHcCCCEEEE--ecCcHHHHHHHHHHHHCCCCceEEEe
Confidence 3333 2 468999885 44666778899999999999998643
No 78
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=68.27 E-value=1e+02 Score=30.89 Aligned_cols=129 Identities=12% Similarity=0.115 Sum_probs=77.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
..+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~G-t---TGE~---~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~s--------- 92 (306)
T 1o5k_A 29 ELDLESYERLVRYQLENGVNALIVLG-T---TGES---PTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNS--------- 92 (306)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESS-G---GGTG---GGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSC---------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCc-c---ccch---hhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCcc---------
Confidence 35889999999999999999998764 1 1111 1112223566777766554322 344444321
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|- .+|+
T Consensus 93 --------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~ 152 (306)
T 1o5k_A 93 --------TEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISER-TDLGIVVYNVPG-----------RTGV 152 (306)
T ss_dssp --------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTT-CSSCEEEEECHH-----------HHSC
T ss_pred --------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEeCcc-----------ccCc
Confidence 1244555555556899964 556666 678888888877654 368987543332 1355
Q ss_pred CCCHHHHHHhC
Q 008423 212 KIPAEITAALE 222 (566)
Q Consensus 212 ~VP~~il~~Le 222 (566)
.++.+.+.+|.
T Consensus 153 ~l~~~~~~~La 163 (306)
T 1o5k_A 153 NVLPETAARIA 163 (306)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 56665555553
No 79
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=68.12 E-value=49 Score=33.00 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=76.1
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
..+.+.+++.++...+.|++.|+++.. .|+. ..-..+.=.++++...+..+.. .-+|+.++-
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~Gt----tGE~---~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~--------- 82 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGT----TAES---PTLTTDEKELILKTVIDLVDKRVPVIAGTGTND--------- 82 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSG----GGTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC---------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcc----cccc---ccCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc---------
Confidence 468899999999999999999997641 1111 1112233456777766654333 334443321
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++- ++||+.==.|- .+|+
T Consensus 83 --------t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn~P~-----------~tg~ 142 (292)
T 3daq_A 83 --------TEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV-KLPVVLYNVPS-----------RTNM 142 (292)
T ss_dssp --------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH-CSCEEEEECHH-----------HHSC
T ss_pred --------HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC-CCCEEEEeccc-----------ccCC
Confidence 1234444444455799964 444555 4567777777766542 68887544332 2366
Q ss_pred CCCHHHHHHhCC
Q 008423 212 KIPAEITAALEP 223 (566)
Q Consensus 212 ~VP~~il~~Le~ 223 (566)
.++.+.+.+|..
T Consensus 143 ~l~~~~~~~La~ 154 (292)
T 3daq_A 143 TIEPETVEILSQ 154 (292)
T ss_dssp CCCHHHHHHHHT
T ss_pred CCCHHHHHHHhc
Confidence 677666666644
No 80
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=67.84 E-value=38 Score=36.24 Aligned_cols=113 Identities=12% Similarity=0.158 Sum_probs=69.6
Q ss_pred CCc-eeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC-CccccCCCc------ccHHHHHHHHHHHcCCce
Q 008423 47 CVE-TMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD-KFVQIQGGF------ACALDLVKHIRSAYGDYF 118 (566)
Q Consensus 47 Gle-~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~-~~~~~~~~F------~~A~dLVk~Ir~~~gd~F 118 (566)
.++ ++.-++. +.+.+++.+....+.++|+.-|.+-.+-..+... ......+++ ..+.++|+.+++..+..+
T Consensus 296 ~~P~V~vKisp-d~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 296 KKPLVFVKLAP-DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SCCEEEEEECS-CCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCeEEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 356 5666654 6777788888889999999998877654322110 000112333 346788999998764333
Q ss_pred -eEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--EeccCC-CHHHHHHHHHHH
Q 008423 119 -GITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--ITQLFY-DTDMFLKFVNDC 180 (566)
Q Consensus 119 -~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--ITQlff-D~d~f~~f~~~~ 180 (566)
-||+.+.- + -+-..+++.+|||.+ =|.++| ++..+.+..+.+
T Consensus 375 PVIg~GGI~-------s-------------~~DA~e~l~aGAd~Vqigrall~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 375 PIIASGGIF-------S-------------GLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKREL 420 (443)
T ss_dssp CEEEESSCC-------S-------------HHHHHHHHHTTEEEEEESHHHHHHGGGHHHHHHHHH
T ss_pred cEEEECCCC-------C-------------HHHHHHHHHcCCCEEEEcHHHHhcChHHHHHHHHHH
Confidence 44444321 1 233567778999986 477787 777666655443
No 81
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=67.81 E-value=49 Score=34.04 Aligned_cols=112 Identities=10% Similarity=-0.047 Sum_probs=64.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+.+.+.++.+.+.||+.|+++.. .|+. ..-..+.=.++++. .-...-..-+|+.++-
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~Gt----TGE~---~~Ls~eEr~~vi~~-~~~grvpViaGvg~~s------------ 103 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGS----MGDW---PLLTDEQRMEGVER-LVKAGIPVIVGTGAVN------------ 103 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSG----GGTG---GGSCHHHHHHHHHH-HHHTTCCEEEECCCSS------------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----CcCh---hhCCHHHHHHHHHH-HhCCCCcEEEecCCCC------------
Confidence 58899999999999999999987641 1111 11112223455555 1111122444544321
Q ss_pred CCccchHHHHHHHHHHHHcCCcEE-EeccCCC----HHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLI-ITQLFYD----TDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlffD----~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
.++-++..+.=.++|||.+ +.-++|. .+.+.++.+.+-++-.++||+.==.|
T Consensus 104 -----t~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 104 -----TASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp -----HHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG
T ss_pred -----HHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence 1234555555556899954 4456653 37777888777662346898765555
No 82
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=67.80 E-value=30 Score=33.90 Aligned_cols=89 Identities=19% Similarity=0.191 Sum_probs=51.8
Q ss_pred HHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHH-------HHHHHHHH
Q 008423 108 KHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDM-------FLKFVNDC 180 (566)
Q Consensus 108 k~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~-------f~~f~~~~ 180 (566)
+.+|+..+....||+.+ |. . .| +++-.++|||||...++|.... =.+.++++
T Consensus 126 ~~~r~~~~~~~~iG~S~----ht----~----------~E---a~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~ 184 (243)
T 3o63_A 126 NVARQILAPDTLIGRST----HD----P----------DQ---VAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVA 184 (243)
T ss_dssp HHHHHHSCTTCEEEEEE----CS----H----------HH---HHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHH
T ss_pred HHHHHhhCCCCEEEEeC----CC----H----------HH---HHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHH
Confidence 34566677678899986 41 1 22 4444568999999988874421 12344555
Q ss_pred HHc-CCCCcEE--eeecccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 181 RQI-GITCPIV--PGIMPINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 181 R~~-Gi~vPII--pGImPI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
++. +.++||+ -|| -..+...+.. +-..|+.|=..|++
T Consensus 185 ~~~~~~~iPvvAiGGI-~~~ni~~~~~-aGa~gvav~sai~~ 224 (243)
T 3o63_A 185 AELGGDDKPWFAIGGI-NAQRLPAVLD-AGARRIVVVRAITS 224 (243)
T ss_dssp HTC---CCCEEEESSC-CTTTHHHHHH-TTCCCEEESHHHHT
T ss_pred HHhccCCCCEEEecCC-CHHHHHHHHH-cCCCEEEEeHHHhC
Confidence 544 3478874 466 3444544443 44667777777654
No 83
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=67.56 E-value=25 Score=35.02 Aligned_cols=126 Identities=10% Similarity=0.080 Sum_probs=76.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+. .-+|+.++ +
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~G-t---TGE~---~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~--------~---- 76 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNG-T---TGLG---PALSKDEKRQNLNALYDVTHK-LIFQVGSL--------N---- 76 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETS-T---TTTG---GGSCHHHHHHHHHHHTTTCSC-EEEECCCS--------C----
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCC-eEEeeCCC--------C----
Confidence 5889999999999999999998764 2 1221 112223356677776655444 44444331 1
Q ss_pred CCccchHHHHHHHHHHHHcCCcEE-EeccCCC----HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLI-ITQLFYD----TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlffD----~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~V 213 (566)
.++-++..+.=.++|||.+ +.-++|. .+.+.++.+.+-++ .++||+.==.|- .+|+.+
T Consensus 77 -----t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~l 139 (288)
T 2nuw_A 77 -----LNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI-SSHSLYIYNYPA-----------ATGYDI 139 (288)
T ss_dssp -----HHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH-CCSCEEEEECHH-----------HHSCCC
T ss_pred -----HHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh-cCCCEEEEECch-----------HhCcCC
Confidence 1244555555556899964 5556664 36677777776554 368887543332 146777
Q ss_pred CHHHHHHh
Q 008423 214 PAEITAAL 221 (566)
Q Consensus 214 P~~il~~L 221 (566)
+.+.+.+|
T Consensus 140 ~~~~~~~L 147 (288)
T 2nuw_A 140 PPSILKSL 147 (288)
T ss_dssp CHHHHTTT
T ss_pred CHHHHhcc
Confidence 77776666
No 84
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=66.48 E-value=8.4 Score=45.33 Aligned_cols=111 Identities=12% Similarity=0.076 Sum_probs=72.8
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe------------ccCCCH-HHHHHHHHHHHHcC
Q 008423 118 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT------------QLFYDT-DMFLKFVNDCRQIG 184 (566)
Q Consensus 118 F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT------------QlffD~-d~f~~f~~~~R~~G 184 (566)
+-+|+.-||+.-|. + +.-++++++| .++|.+.|-| |+-|+- ..+.+|++.|+++|
T Consensus 21 ~l~sG~~hy~r~p~---~------~~W~d~l~km---ka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~G 88 (971)
T 1tg7_A 21 MIFSGEVHPYRLPV---A------SLYIDIFEKV---KALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAG 88 (971)
T ss_dssp CEEEEECCGGGSCC---G------GGHHHHHHHH---HTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHT
T ss_pred EEEEEEECcccCCc---h------HHHHHHHHHH---HHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcC
Confidence 57788888887541 1 1122333333 2579999999 444441 24788899999999
Q ss_pred CCCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHc
Q 008423 185 ITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAH 249 (566)
Q Consensus 185 i~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~ 249 (566)
+. ||..+-|-.. +++..-.+|.++.+.=...+.+++..+++--++..+|++++.+.
T Consensus 89 l~--ViLr~GPyi~-------aE~~~GG~P~WL~~~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~ 144 (971)
T 1tg7_A 89 IY--LLARPGPYIN-------AEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATIAKA 144 (971)
T ss_dssp CE--EEEECCSCCC-------TTBGGGGCCGGGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CE--EEEecCCccc-------ceecCCCcceeecccCCEecCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 66 6666656543 55666668888776422334456678888888888999988853
No 85
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=66.18 E-value=27 Score=36.24 Aligned_cols=153 Identities=12% Similarity=0.062 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCc
Q 008423 62 EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASN 141 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~ 141 (566)
+.+.+...++.+.|.+.+=+=-|+.-. +.+........++.|+.+|+..|+.+.|.+=++ .+ .+.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~----~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan-~~----~~~------ 214 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGR----HMPLWEGTKRDIAIVRGISEVAGPAGKIMIDAN-NA----YNL------ 214 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHH----TSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECT-TC----CCH------
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcc----cCCccccHHHHHHHHHHHHHHhCCCCeEEEECC-CC----CCH------
Confidence 666677777888998877643332100 000011234578889999998888888887553 11 122
Q ss_pred cchHHHHHHHHHHHH-cCCcEEEeccCC-CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHH
Q 008423 142 ESYQSDLLYLKKKVD-AGADLIITQLFY-DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEI 217 (566)
Q Consensus 142 ~~~~~dl~~Lk~Kvd-AGAdFiITQlff-D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~i 217 (566)
.+..++.++++ .|.+ .|=|++- |.+.+.++.+.++++|..+||..|= +.+...+.++.+ .+.+-.++
T Consensus 215 ----~~ai~~~~~l~~~~i~-~iE~P~~~d~~~~~~l~~~l~~~g~~iPIa~dE--~~~~~~~~~~i~~~~~d~v~ik-- 285 (392)
T 3p3b_A 215 ----NLTKEVLAALSDVNLY-WLEEAFHEDEALYEDLKEWLGQRGQNVLIADGE--GLASPHLIEWATRGRVDVLQYD-- 285 (392)
T ss_dssp ----HHHHHHHHHTTTSCEE-EEECSSSCCHHHHHHHHHHHHHHTCCCEEEECC--SSCCTTHHHHHHTTSCCEECCB--
T ss_pred ----HHHHHHHHHHHhcCCC-EEecCCcccHHHHHHHHHhhccCCCCccEEecC--CCCHHHHHHHHHcCCCCEEEeC--
Confidence 23333444454 3444 5789885 7777777777777778889998886 788777776542 23322221
Q ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 218 TAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 218 l~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
- .+- |+.-+.++++...+.|+
T Consensus 286 --------~----~~~-Git~~~~i~~~A~~~gi 306 (392)
T 3p3b_A 286 --------I----IWP-GFTHWMELGEKLDAHGL 306 (392)
T ss_dssp --------T----TTB-CHHHHHHHHHHHHHTTC
T ss_pred --------c----ccc-CHHHHHHHHHHHHHcCC
Confidence 0 233 66777777777777763
No 86
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=65.95 E-value=59 Score=32.94 Aligned_cols=128 Identities=12% Similarity=0.107 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~G-t---TGE~---~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~s---------- 102 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVG-T---TGES---PTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNS---------- 102 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc-c---ccCc---cccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC----------
Confidence 4889999999999999999998663 1 1221 1122333566777766654322 344444321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++ .++||+.==.|- .+|+.
T Consensus 103 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~ 163 (315)
T 3si9_A 103 -------TSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKA-ISIPIIIYNIPS-----------RSVID 163 (315)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEECHH-----------HHSCC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHc-CCCCEEEEeCch-----------hhCCC
Confidence 2244555555557899964 344555 566777777777665 368987544332 13566
Q ss_pred CCHHHHHHhC
Q 008423 213 IPAEITAALE 222 (566)
Q Consensus 213 VP~~il~~Le 222 (566)
++.+.+.+|.
T Consensus 164 l~~~~~~~La 173 (315)
T 3si9_A 164 MAVETMRDLC 173 (315)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 6666665554
No 87
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=65.90 E-value=1.1e+02 Score=30.35 Aligned_cols=129 Identities=10% Similarity=0.124 Sum_probs=77.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~---------- 81 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVG-T---TGEA---STLSMEEHTQVIKEIIRVANKRIPIIAGTGANS---------- 81 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECc-c---cccc---ccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCC----------
Confidence 4889999999999999999998664 2 1221 1122333566777766654333 333433211
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++- ++||+.==.|- .+|+.
T Consensus 82 -------t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~-~lPiilYn~P~-----------~tg~~ 142 (291)
T 3tak_A 82 -------TREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV-ELPLILYNVPG-----------RTGVD 142 (291)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC-CSCEEEEECHH-----------HHSCC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc-CCCEEEEeccc-----------ccCCC
Confidence 2244555555556899964 344554 5677777777776653 68987543332 24666
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+.+.+|..
T Consensus 143 l~~~~~~~La~ 153 (291)
T 3tak_A 143 LSNDTAVRLAE 153 (291)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHHc
Confidence 66666666654
No 88
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=65.71 E-value=60 Score=29.96 Aligned_cols=160 Identities=12% Similarity=0.026 Sum_probs=87.4
Q ss_pred CcCEEEecCCCCCCCchhHHHHHHHHHhh-cCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc
Q 008423 17 TRHSATSRWGAGGSTADLTLDIANRMQNT-ICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ 95 (566)
Q Consensus 17 ~p~fVsVTwgagG~~~~~Sl~la~~lq~~-~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~ 95 (566)
..|.+-++. |.- -...+++.+.+++. .++++..|+-..+-.+ ..+..+.++|++-|++- +.+
T Consensus 25 ~~diie~G~-p~~--~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~----~~~~~~~~~Gad~v~v~--~~~-------- 87 (211)
T 3f4w_A 25 DVDIIEVGT-PFL--IREGVNAIKAIKEKYPHKEVLADAKIMDGGH----FESQLLFDAGADYVTVL--GVT-------- 87 (211)
T ss_dssp GCSEEEECH-HHH--HHHTTHHHHHHHHHCTTSEEEEEEEECSCHH----HHHHHHHHTTCSEEEEE--TTS--------
T ss_pred CccEEEeCc-HHH--HhccHHHHHHHHHhCCCCEEEEEEEeccchH----HHHHHHHhcCCCEEEEe--CCC--------
Confidence 456665554 110 11234667777776 4788878876654322 34778889999988862 221
Q ss_pred cCCCcccHHHHHHHHHHHcCCceeEEEE-ecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHH-
Q 008423 96 IQGGFACALDLVKHIRSAYGDYFGITVA-GYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMF- 173 (566)
Q Consensus 96 ~~~~F~~A~dLVk~Ir~~~gd~F~IGVA-gyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f- 173 (566)
.-....++++.+++ +| ..+++. ..|+ ...+++++=.++|+||+.+-..|+...+
T Consensus 88 ---~~~~~~~~~~~~~~-~g--~~~~v~~~~~~------------------t~~~~~~~~~~~g~d~i~v~~g~~g~~~~ 143 (211)
T 3f4w_A 88 ---DVLTIQSCIRAAKE-AG--KQVVVDMICVD------------------DLPARVRLLEEAGADMLAVHTGTDQQAAG 143 (211)
T ss_dssp ---CHHHHHHHHHHHHH-HT--CEEEEECTTCS------------------SHHHHHHHHHHHTCCEEEEECCHHHHHTT
T ss_pred ---ChhHHHHHHHHHHH-cC--CeEEEEecCCC------------------CHHHHHHHHHHcCCCEEEEcCCCcccccC
Confidence 01123567777775 45 355553 2231 1134455556789999877665554332
Q ss_pred ---HHHHHHHHHcCCCCcEE--eeecccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 174 ---LKFVNDCRQIGITCPIV--PGIMPINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 174 ---~~f~~~~R~~Gi~vPII--pGImPI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
.+.++++|+.--++||+ .||- ..+.+.+.. +-.-++-+-..+.+
T Consensus 144 ~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~~-~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 144 RKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYAL-LGPDVVIVGSAITH 192 (211)
T ss_dssp CCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHHT-TCCSEEEECHHHHT
T ss_pred CCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHH-cCCCEEEECHHHcC
Confidence 34566676652257774 4564 344443332 12344556666543
No 89
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=65.60 E-value=30 Score=33.64 Aligned_cols=92 Identities=13% Similarity=0.072 Sum_probs=60.4
Q ss_pred CCCcCE--EEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCC
Q 008423 15 PTTRHS--ATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK 92 (566)
Q Consensus 15 ~~~p~f--VsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~ 92 (566)
+...++ ++|-+|..-..-.--..+++.+++.+.++...||=+.|- +..++.+.++|..-|.+--..+
T Consensus 23 ~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp-----~~~i~~~~~aGAd~itvh~Ea~------ 91 (231)
T 3ctl_A 23 DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRP-----QDYIAQLARAGADFITLHPETI------ 91 (231)
T ss_dssp HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCG-----GGTHHHHHHHTCSEEEECGGGC------
T ss_pred HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCH-----HHHHHHHHHcCCCEEEECcccC------
Confidence 555665 566665421111123567788887778899999998753 3356777889998887552110
Q ss_pred ccccCCCcccHHHHHHHHHHHcCCceeEEEEecCC
Q 008423 93 FVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPE 127 (566)
Q Consensus 93 ~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPE 127 (566)
. .+...+++.||+ +| ..+|++.+|.
T Consensus 92 -----~--~~~~~~i~~i~~-~G--~k~gv~lnp~ 116 (231)
T 3ctl_A 92 -----N--GQAFRLIDEIRR-HD--MKVGLILNPE 116 (231)
T ss_dssp -----T--TTHHHHHHHHHH-TT--CEEEEEECTT
T ss_pred -----C--ccHHHHHHHHHH-cC--CeEEEEEECC
Confidence 1 135678888885 55 5899999996
No 90
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=65.13 E-value=24 Score=33.38 Aligned_cols=84 Identities=11% Similarity=0.023 Sum_probs=52.7
Q ss_pred cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 102 CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 102 ~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
...++|+.||+.+++ ..|..-.+.-..| .. +.++=.+||||+++.-..-..+.+.++++.++
T Consensus 45 ~G~~~i~~lr~~~~~-~~i~ld~~l~d~p--------------~~---~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~ 106 (218)
T 3jr2_A 45 EGMKAVSTLRHNHPN-HILVCDMKTTDGG--------------AI---LSRMAFEAGADWITVSAAAHIATIAACKKVAD 106 (218)
T ss_dssp HTTHHHHHHHHHCTT-SEEEEEEEECSCH--------------HH---HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCC-CcEEEEEeecccH--------------HH---HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHH
Confidence 457889999988643 2343333332111 12 33444679999999887777777889999999
Q ss_pred HcCCCCcE-EeeecccCCHHHHHHHh
Q 008423 182 QIGITCPI-VPGIMPINNYKGFLRMT 206 (566)
Q Consensus 182 ~~Gi~vPI-IpGImPI~s~~~~~r~~ 206 (566)
+.|+...+ ++|+ . |......+.
T Consensus 107 ~~g~~~~~d~l~~--~-T~~~~~~~~ 129 (218)
T 3jr2_A 107 ELNGEIQIEIYGN--W-TMQDAKAWV 129 (218)
T ss_dssp HHTCEEEEECCSS--C-CHHHHHHHH
T ss_pred HhCCccceeeeec--C-CHHHHHHHH
Confidence 99965444 5555 2 334444433
No 91
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=64.77 E-value=33 Score=34.24 Aligned_cols=125 Identities=13% Similarity=0.109 Sum_probs=74.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+.+.+.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+. .-+|+.++ +
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~--------~---- 76 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNG-T---TGLG---PSLSPEEKLENLKAVYDVTNK-IIFQVGGL--------N---- 76 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS-T---TTTG---GGSCHHHHHHHHHHHHTTCSC-EEEECCCS--------C----
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHcCC-EEEecCCC--------C----
Confidence 5889999999999999999999764 2 1221 112233356777777765444 44444331 1
Q ss_pred CCccchHHHHHHHHHHHHcCCcE-EEeccCCC----HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADL-IITQLFYD----TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdF-iITQlffD----~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~V 213 (566)
.++-++..+.=.++|||. .+.-++|. .+.+.+|.+.+-++ .++||+.==.|- .+|+.+
T Consensus 77 -----t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~~l 139 (293)
T 1w3i_A 77 -----LDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV-SPHPVYLYNYPT-----------ATGKDI 139 (293)
T ss_dssp -----HHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH-CSSCEEEEECHH-----------HHSCCC
T ss_pred -----HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh-CCCCEEEEECch-----------hhCcCC
Confidence 123455455545689995 35556664 36677777776654 368886543332 135666
Q ss_pred CHHHHHH
Q 008423 214 PAEITAA 220 (566)
Q Consensus 214 P~~il~~ 220 (566)
+.+.+.+
T Consensus 140 ~~~~~~~ 146 (293)
T 1w3i_A 140 DAKVAKE 146 (293)
T ss_dssp CHHHHHH
T ss_pred CHHHHHh
Confidence 6665544
No 92
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=64.40 E-value=89 Score=31.12 Aligned_cols=127 Identities=10% Similarity=0.049 Sum_probs=67.7
Q ss_pred CCCchhHHHHHHHHHhhcCCceeEEecc------cc-------CCH-HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcc
Q 008423 29 GSTADLTLDIANRMQNTICVETMMHLTC------TN-------MPV-EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFV 94 (566)
Q Consensus 29 G~~~~~Sl~la~~lq~~~Gle~i~HLTC------rd-------~n~-~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~ 94 (566)
...+..++.++..+.+ .+++.|..-+. ++ -+. .+......-++..|.+.|.+|. |..
T Consensus 78 ~~~S~~~~a~~~~~~~-~~ip~is~~~~~~~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~v~ii~-d~~------- 148 (395)
T 3h6g_A 78 PSHSSSANAVQSICNA-LGVPHIQTRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS------- 148 (395)
T ss_dssp CSSHHHHHHHHHHHHH-TTCCEEECSCCCCCTTCCCCSEEEEEECHHHHHHHHHHHHHHTTCSEEEEEE-SST-------
T ss_pred CCChhHHHHHHHHHhc-CCCCeEeeccCcccccccCceEEEecCCHHHHHHHHHHHHHHCCCeEEEEEE-ECh-------
Confidence 3344556666666664 67766543110 00 122 2333333345778999999885 421
Q ss_pred ccCCCcccHHHHHHHHHHHcC-CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHH
Q 008423 95 QIQGGFACALDLVKHIRSAYG-DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMF 173 (566)
Q Consensus 95 ~~~~~F~~A~dLVk~Ir~~~g-d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f 173 (566)
+...+++.+++... ...+|....||.+. . ++...+.+++ ++++|.|+.-. ..+..
T Consensus 149 -------~g~~~~~~~~~~~~~~g~~v~~~~~~~~~---~---------d~~~~l~~i~---~~~~~vi~~~~--~~~~~ 204 (395)
T 3h6g_A 149 -------TGLIRLQELIKAPSRYNLRLKIRQLPADT---K---------DAKPLLKEMK---RGKEFHVIFDC--SHEMA 204 (395)
T ss_dssp -------HHHHHTHHHHTGGGTSSCEEEEEECCSSG---G---------GGHHHHHHHH---HTTCCEEEEES--CHHHH
T ss_pred -------hHHHHHHHHHHhhhcCCceEEEEEeCCCc---h---------hHHHHHHHHh---hcCCeEEEEEC--CHHHH
Confidence 23334444443321 11355443355431 1 1223344333 35899988733 44567
Q ss_pred HHHHHHHHHcCCCCc
Q 008423 174 LKFVNDCRQIGITCP 188 (566)
Q Consensus 174 ~~f~~~~R~~Gi~vP 188 (566)
..+++++++.|++.+
T Consensus 205 ~~~~~qa~~~gl~~~ 219 (395)
T 3h6g_A 205 AGILKQALAMGMMTE 219 (395)
T ss_dssp HHHHHHHHHTTCCST
T ss_pred HHHHHHHHHccccCC
Confidence 889999999998877
No 93
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=64.40 E-value=1.2e+02 Score=30.18 Aligned_cols=128 Identities=13% Similarity=0.142 Sum_probs=76.1
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
..+.+.+.+.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++ +
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~--------~- 80 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILVCG-T---TGES---PTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGN--------A- 80 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCS--------C-
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC--------C-
Confidence 35889999999999999999999764 2 1221 1122233566777766554333 33343321 1
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|-. +|+
T Consensus 81 --------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~~-----------tg~ 140 (294)
T 2ehh_A 81 --------THEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQE-VDIPIIIYNIPSR-----------TCV 140 (294)
T ss_dssp --------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CCSCEEEEECHHH-----------HSC
T ss_pred --------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCCcc-----------cCc
Confidence 2244555555567899964 555666 677788877776654 3688865433321 355
Q ss_pred CCCHHHHHHh
Q 008423 212 KIPAEITAAL 221 (566)
Q Consensus 212 ~VP~~il~~L 221 (566)
.++.+.+.+|
T Consensus 141 ~l~~~~~~~L 150 (294)
T 2ehh_A 141 EISVDTMFKL 150 (294)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 5565555555
No 94
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=64.28 E-value=35 Score=32.22 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=69.2
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
..++.+.|-|. ..+.+.++.+.+.|++-|=+--.|-+-. .......++++.||+..+..+.+++-.++
T Consensus 12 ~i~p~i~a~d~--~~~~~~i~~~~~~G~d~i~l~~~dg~f~--------~~~~~~~~~i~~l~~~~~~~~~v~l~vnd-- 79 (230)
T 1rpx_A 12 IVSPSILSANF--SKLGEQVKAIEQAGCDWIHVDVMDGRFV--------PNITIGPLVVDSLRPITDLPLDVHLMIVE-- 79 (230)
T ss_dssp EEEEBGGGSCG--GGHHHHHHHHHHTTCCCEEEEEEBSSSS--------SCBCCCHHHHHHHGGGCCSCEEEEEESSS--
T ss_pred EEEEEeecCCH--HHHHHHHHHHHHCCCCEEEEeeccCCcc--------cccccCHHHHHHHHhccCCcEEEEEEecC--
Confidence 45778888774 4677888888899997654322232210 01223468888888765434555554433
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC-CCHHHHHHHHHHHHHcCCCCcEEeeecccCCH
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF-YDTDMFLKFVNDCRQIGITCPIVPGIMPINNY 199 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf-fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~ 199 (566)
| . .+++.=.++|||+++--.. +..+...++++.+++.| +.+...+.|=+..
T Consensus 80 -~---------------~--~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g--~~ig~~~~p~t~~ 131 (230)
T 1rpx_A 80 -P---------------D--QRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLG--AKAGVVLNPGTPL 131 (230)
T ss_dssp -H---------------H--HHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTT--SEEEEEECTTCCG
T ss_pred -H---------------H--HHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcC--CcEEEEeCCCCCH
Confidence 1 1 2333335699999853332 12244567888888877 4455555544433
No 95
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=64.13 E-value=86 Score=30.23 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=81.9
Q ss_pred eEEeccccC--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 51 MMHLTCTNM--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 51 i~HLTCrd~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
++++.--+. +.+.|+-++++|+++||++|++-+ ..|+ .|..+.+.+ ..+.|=|..|+.|
T Consensus 17 ~~YF~~~G~eNT~~tl~la~era~e~~Ik~iVVAS----~sG~----------TA~k~~e~~-----~~i~lVvVTh~~G 77 (201)
T 1vp8_A 17 IVYFNKPGRENTEETLRLAVERAKELGIKHLVVAS----SYGD----------TAMKALEMA-----EGLEVVVVTYHTG 77 (201)
T ss_dssp CEEESSCSGGGHHHHHHHHHHHHHHHTCCEEEEEC----SSSH----------HHHHHHHHC-----TTCEEEEEECCTT
T ss_pred EEEecCCCcccHHHHHHHHHHHHHHcCCCEEEEEe----CCCh----------HHHHHHHHh-----cCCeEEEEeCcCC
Confidence 445544343 457788889999999999999753 2221 255555433 2378888898888
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF 208 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l 208 (566)
-.+.... -|+.+. .+++++.| ++|+-|=+++.+.....+ .++
T Consensus 78 F~~pg~~-------------------------------e~~~e~----~~~L~~~G--~~V~t~tH~lsgveR~is-~kf 119 (201)
T 1vp8_A 78 FVREGEN-------------------------------TMPPEV----EEELRKRG--AKIVRQSHILSGLERSIS-RKL 119 (201)
T ss_dssp SSSTTCC-------------------------------SSCHHH----HHHHHHTT--CEEEECCCTTTTTHHHHH-HHT
T ss_pred CCCCCCC-------------------------------cCCHHH----HHHHHhCC--CEEEEEeccccchhHHHH-Hhc
Confidence 6332111 112222 34456667 667888887777764422 244
Q ss_pred CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 209 CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 209 ~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
-|+.-++-+-+.|+. .---|++.|+|+.-...|.|
T Consensus 120 GG~~p~eiiA~tLR~-------~fgqG~KV~vEi~lMAaDAG 154 (201)
T 1vp8_A 120 GGVSRTEAIAEALRS-------LFGHGLKVCVEITIMAADSG 154 (201)
T ss_dssp CCCCHHHHHHHHHHH-------HHCHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHH-------HhcCCceEEEEEeeeecccC
Confidence 455433334345531 23458999999988888886
No 96
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=63.88 E-value=1.3e+02 Score=30.67 Aligned_cols=128 Identities=13% Similarity=0.222 Sum_probs=77.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++.+.+.||+.|+++. - .|+. ..-..+.-.++++.+.+..+.. .-+|+.++ +
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~G-t---TGE~---~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~--------s-- 111 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLG-S---GGEF---SQLGAEERKAIARFAIDHVDRRVPVLIGTGGT--------N-- 111 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCSS--------C--
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC--------C--
Confidence 5889999999999999999999764 1 1221 1122233566777766554322 33444431 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|- .+|+.
T Consensus 112 -------t~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a-~~lPiilYn~P~-----------~tg~~ 172 (343)
T 2v9d_A 112 -------ARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADS-VTLPVMLYNFPA-----------LTGQD 172 (343)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHT-CSSCEEEEECHH-----------HHSSC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCch-----------hcCcC
Confidence 1244555555556899964 445665 677788888777664 368887543332 13566
Q ss_pred CCHHHHHHhC
Q 008423 213 IPAEITAALE 222 (566)
Q Consensus 213 VP~~il~~Le 222 (566)
++.+.+.+|.
T Consensus 173 l~~e~~~~La 182 (343)
T 2v9d_A 173 LTPALVKTLA 182 (343)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 6666666553
No 97
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=63.46 E-value=88 Score=31.04 Aligned_cols=129 Identities=9% Similarity=0.072 Sum_probs=76.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.|++.|+++.. .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt----tGE~---~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~---------- 81 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGT----TGEA---TTMTETERKETIKFVIDKVNKRIPVIAGTGSNN---------- 81 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSG----GGTG---GGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc----------
Confidence 78899999999999999999997641 1111 1112223566777766544322 344444321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|- .+|+.
T Consensus 82 -------t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn~P~-----------~tg~~ 142 (291)
T 3a5f_A 82 -------TAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDA-VSTPIIIYNVPG-----------RTGLN 142 (291)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGG-CCSCEEEEECHH-----------HHSCC
T ss_pred -------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCcc-----------ccCCC
Confidence 1244555555567899953 455665 667777777666554 368887543332 14666
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+.+.+|..
T Consensus 143 l~~~~~~~La~ 153 (291)
T 3a5f_A 143 ITPGTLKELCE 153 (291)
T ss_dssp CCHHHHHHHTT
T ss_pred CCHHHHHHHHc
Confidence 77676666643
No 98
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=63.33 E-value=67 Score=30.44 Aligned_cols=165 Identities=15% Similarity=0.057 Sum_probs=93.6
Q ss_pred hhhccCCCcCEE--EecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 008423 10 WTAWWPTTRHSA--TSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87 (566)
Q Consensus 10 ~~~~~~~~p~fV--sVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp 87 (566)
..++.+...+++ .|-+|+.-.......++++.+++.+..+...||-..|. .+.++.+.++|+.-|.+--+..+
T Consensus 25 i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~-----~~~i~~~~~agad~v~vH~~~~~ 99 (228)
T 1h1y_A 25 ADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNP-----SDYVEPLAKAGASGFTFHIEVSR 99 (228)
T ss_dssp HHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCG-----GGGHHHHHHHTCSEEEEEGGGCT
T ss_pred HHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCH-----HHHHHHHHHcCCCEEEECCCCcc
Confidence 344556667763 44443321122234688888887666778889988543 23466667789887765433221
Q ss_pred CCCCCccccCCCcccH-HHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHc--CCcEEEe
Q 008423 88 HGQDKFVQIQGGFACA-LDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDA--GADLIIT 164 (566)
Q Consensus 88 ~~~~~~~~~~~~F~~A-~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdA--GAdFiIT 164 (566)
.. ...++.+++ +| ..+|++.+|... .++++.=.++ |+||+.-
T Consensus 100 --------------~~~~~~~~~i~~-~g--~~igv~~~p~t~------------------~e~~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 100 --------------DNWQELIQSIKA-KG--MRPGVSLRPGTP------------------VEEVFPLVEAENPVELVLV 144 (228)
T ss_dssp --------------TTHHHHHHHHHH-TT--CEEEEEECTTSC------------------GGGGHHHHHSSSCCSEEEE
T ss_pred --------------cHHHHHHHHHHH-cC--CCEEEEEeCCCC------------------HHHHHHHHhcCCCCCEEEE
Confidence 23 456677765 44 688999988531 2223332333 8998753
Q ss_pred ---------ccCCCHHHHHHHHHHHHHcCCCCcE--EeeecccCCHHHHHHHhccCCCCCCHHHH
Q 008423 165 ---------QLFYDTDMFLKFVNDCRQIGITCPI--VPGIMPINNYKGFLRMTGFCKTKIPAEIT 218 (566)
Q Consensus 165 ---------QlffD~d~f~~f~~~~R~~Gi~vPI--IpGImPI~s~~~~~r~~~l~Gv~VP~~il 218 (566)
|- |+...+.+ ++++|+.-.++|| ..||-+ .+...+.. +-.-++-+=..+.
T Consensus 145 ~sv~pg~~g~~-~~~~~l~~-i~~~~~~~~~~pi~v~GGI~~-~ni~~~~~-aGaD~vvvGsai~ 205 (228)
T 1h1y_A 145 MTVEPGFGGQK-FMPEMMEK-VRALRKKYPSLDIEVDGGLGP-STIDVAAS-AGANCIVAGSSIF 205 (228)
T ss_dssp ESSCTTCSSCC-CCGGGHHH-HHHHHHHCTTSEEEEESSCST-TTHHHHHH-HTCCEEEESHHHH
T ss_pred EeecCCCCccc-CCHHHHHH-HHHHHHhcCCCCEEEECCcCH-HHHHHHHH-cCCCEEEECHHHH
Confidence 32 45555444 4555554225776 578877 77766543 2233344445553
No 99
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=62.97 E-value=1.2e+02 Score=29.98 Aligned_cols=128 Identities=8% Similarity=0.047 Sum_probs=74.8
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKS-NGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~-~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
.+.+.+++.++...+ .|++.|+++.. .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~Gt----tGE~---~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~--------- 84 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGS----TGEN---FMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVN--------- 84 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSG----GGTG---GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC---------
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCcc----ccch---hhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCC---------
Confidence 488999999999999 99999997641 1221 1122233566777766554333 333443311
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcE-EEeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADL-IITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdF-iITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||. .+.-++| +.+.+.++.+.+-++ .++||+.==.|- .+|+
T Consensus 85 --------t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~ 144 (293)
T 1f6k_A 85 --------LKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAE-TGSNMIVYSIPF-----------LTGV 144 (293)
T ss_dssp --------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-HCCCEEEEECHH-----------HHCC
T ss_pred --------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEECcc-----------ccCc
Confidence 123455555555689995 3555666 667777777766553 247886433332 1356
Q ss_pred CCCHHHHHHhC
Q 008423 212 KIPAEITAALE 222 (566)
Q Consensus 212 ~VP~~il~~Le 222 (566)
.++.+.+.+|.
T Consensus 145 ~l~~~~~~~La 155 (293)
T 1f6k_A 145 NMGIEQFGELY 155 (293)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHh
Confidence 66666666653
No 100
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=62.92 E-value=79 Score=31.49 Aligned_cols=129 Identities=13% Similarity=0.059 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++.+.+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~---------- 83 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFG-T---TGEG---CSVGSRERQAILSSFIAAGIAPSRIVTGVLVDS---------- 83 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSS----------
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcc----------
Confidence 5889999999999999999999764 1 1221 1122233566777776654333 344554321
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC----CHHHHHHHHHHHHHcCC--CCcEEeeecccCCHHHHHHHhccC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY----DTDMFLKFVNDCRQIGI--TCPIVPGIMPINNYKGFLRMTGFC 209 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff----D~d~f~~f~~~~R~~Gi--~vPIIpGImPI~s~~~~~r~~~l~ 209 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.+|.+.+-++-- ++||+.==.|- .+
T Consensus 84 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~-----------~t 145 (294)
T 3b4u_A 84 -------IEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPS-----------VT 145 (294)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHH-----------HH
T ss_pred -------HHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcc-----------hh
Confidence 1244555555556899954 445665 34667777777655411 47886433332 13
Q ss_pred CCCCCHHHHHHhC
Q 008423 210 KTKIPAEITAALE 222 (566)
Q Consensus 210 Gv~VP~~il~~Le 222 (566)
|+.++.+.+.+|.
T Consensus 146 g~~l~~~~~~~La 158 (294)
T 3b4u_A 146 MVTLSVELVGRLK 158 (294)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CcCCCHHHHHHHH
Confidence 5666666555553
No 101
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=62.81 E-value=37 Score=32.31 Aligned_cols=122 Identities=11% Similarity=0.129 Sum_probs=73.4
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
..++.+.|-| ...+.+.++.+.+.|++-|-+--=|-+ +. .......++++.||+.....+.+++-.+.
T Consensus 8 ~i~psi~a~d--~~~l~~~i~~~~~~Gad~i~l~i~Dg~-----fv---~~~~~~~~~~~~lr~~~~~~~~v~lmv~d-- 75 (228)
T 1h1y_A 8 KIAPSMLSSD--FANLAAEADRMVRLGADWLHMDIMDGH-----FV---PNLTIGAPVIQSLRKHTKAYLDCHLMVTN-- 75 (228)
T ss_dssp EEEEBGGGSC--GGGHHHHHHHHHHTTCSEEEEEEEBSS-----SS---SCBCBCHHHHHHHHTTCCSEEEEEEESSC--
T ss_pred eEEEEeeeCC--HHHHHHHHHHHHHcCCCEEEEEEecCC-----cC---cchhhCHHHHHHHHhhcCCcEEEEEEecC--
Confidence 4678888887 556778888899999987632211211 00 01233568888888765323555555432
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHH
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGF 202 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~ 202 (566)
| .++++.-.++|||.++-...-+.+.+.+.++.+++.| +.+...+-|=+....+
T Consensus 76 -~-----------------~~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~ 129 (228)
T 1h1y_A 76 -P-----------------SDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEV 129 (228)
T ss_dssp -G-----------------GGGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGG
T ss_pred -H-----------------HHHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHH
Confidence 1 1123444458999997776655444378888999887 4455555444444333
No 102
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=62.65 E-value=68 Score=32.51 Aligned_cols=120 Identities=14% Similarity=0.128 Sum_probs=78.5
Q ss_pred HHHHHHHHHhhcCCceeEEecccc-----CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTN-----MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKH 109 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd-----~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~ 109 (566)
.++++..+++...+++..-|+..+ .+.+...+.+..+.+.|+.-|-+..|..... .. +... .+..++++.
T Consensus 197 ~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~-~~--~~~~--~~~~~~~~~ 271 (338)
T 1z41_A 197 LREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHA-DI--NVFP--GYQVSFAEK 271 (338)
T ss_dssp HHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCC-CC--CCCT--TTTHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccC-CC--CCCc--cchHHHHHH
Confidence 578888888877899999998863 4667777888888999999988877653210 00 0001 124677888
Q ss_pred HHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcC-CcEE--EeccCCCHHHHHHHHHHH
Q 008423 110 IRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAG-ADLI--ITQLFYDTDMFLKFVNDC 180 (566)
Q Consensus 110 Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAG-AdFi--ITQlffD~d~f~~f~~~~ 180 (566)
||+..+- --|++.++- +.+...+-+++| ||+| -+.++.|++.+.++.+..
T Consensus 272 ir~~~~i-PVi~~Ggi~--------------------s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~ 324 (338)
T 1z41_A 272 IREQADM-ATGAVGMIT--------------------DGSMAEEILQNGRADLIFIGRELLRDPFFARTAAKQL 324 (338)
T ss_dssp HHHHHCC-EEEECSSCC--------------------SHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHT
T ss_pred HHHHCCC-CEEEECCCC--------------------CHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHcCC
Confidence 8877642 123332221 123345666788 9975 568888998887776554
No 103
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=62.29 E-value=62 Score=32.24 Aligned_cols=57 Identities=11% Similarity=0.124 Sum_probs=38.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEec
Q 008423 57 TNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGY 125 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgy 125 (566)
..++.+++.+.+..+.+.|++.|....|+|--. . .-.+|++++++..+. ..+.+..+
T Consensus 48 ~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPll~--------~---~l~~li~~~~~~~~~-~~i~i~TN 104 (340)
T 1tv8_A 48 ELLTFDEMARIAKVYAELGVKKIRITGGEPLMR--------R---DLDVLIAKLNQIDGI-EDIGLTTN 104 (340)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEESSCGGGS--------T---THHHHHHHHTTCTTC-CEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEeCCCccch--------h---hHHHHHHHHHhCCCC-CeEEEEeC
Confidence 447889999999999999999988776665421 1 236788888754331 14555444
No 104
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=62.18 E-value=80 Score=32.39 Aligned_cols=126 Identities=12% Similarity=0.117 Sum_probs=70.7
Q ss_pred cccCCHHHHHHHHH-------HHHHcCCCEEEEecC---------CCCC--CCCCcc-ccCCCcccHHHHHHHHHHHcCC
Q 008423 56 CTNMPVEKIDHALQ-------TIKSNGIQNVLALRG---------DPPH--GQDKFV-QIQGGFACALDLVKHIRSAYGD 116 (566)
Q Consensus 56 Crd~n~~~L~~~L~-------~a~~~GIrNILaLrG---------Dpp~--~~~~~~-~~~~~F~~A~dLVk~Ir~~~gd 116 (566)
.+.|+.++|++.++ .|+++|++-|=+=.+ .|.. -.+.|- ...+......++|+.||+..|+
T Consensus 130 p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~ 209 (343)
T 3kru_A 130 PRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPE 209 (343)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCT
T ss_pred chhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCc
Confidence 45677777776654 346789998775432 2211 111110 0112234578999999999998
Q ss_pred ceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe-------ccC-CCHHHHHHHHHHHHHcCCCCc
Q 008423 117 YFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT-------QLF-YDTDMFLKFVNDCRQIGITCP 188 (566)
Q Consensus 117 ~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-------Qlf-fD~d~f~~f~~~~R~~Gi~vP 188 (566)
+|.|+|=..|+...+... + ..+..++.+.++.-+|+|-. |.. ........|.+.+|+. .++|
T Consensus 210 d~pv~vRls~~~~~~~g~--------~-~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~-~~iP 279 (343)
T 3kru_A 210 NKPIFVRVSADDYMEGGI--------N-IDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR-CNIK 279 (343)
T ss_dssp TSCEEEEEECCCSSTTSC--------C-HHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-HTCE
T ss_pred cCCeEEEeechhhhccCc--------c-HHHHHHHHHHhhccccEEeccCCceEeeeecccCceeehHHHHHHHh-cCcc
Confidence 899999888854322111 1 14566666666544887643 110 0112234566666664 3577
Q ss_pred EEe
Q 008423 189 IVP 191 (566)
Q Consensus 189 IIp 191 (566)
|+.
T Consensus 280 Vi~ 282 (343)
T 3kru_A 280 TSA 282 (343)
T ss_dssp EEE
T ss_pred cce
Confidence 654
No 105
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=62.16 E-value=69 Score=32.25 Aligned_cols=86 Identities=12% Similarity=0.148 Sum_probs=50.9
Q ss_pred CCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHH---HcCCceeE-EEEecCCCCCCCCCCCCCCCccchHHHHHH
Q 008423 75 GIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRS---AYGDYFGI-TVAGYPEGHPDTIGPDGVASNESYQSDLLY 150 (566)
Q Consensus 75 GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~---~~gd~F~I-GVAgyPEgHpe~~~~~~~~~~~~~~~dl~~ 150 (566)
|.++|.+|..|.+ +...+.+.+++ +.| .+| +...||.+.. +. ...+.+
T Consensus 163 ~~~~vail~~~~~--------------~g~~~~~~~~~~~~~~g--~~vv~~~~~~~~~~---d~---------~~~l~~ 214 (419)
T 3h5l_A 163 PNNKIAIITGPGI--------------YSVNIANAIRDGAGEYG--YDVSLFETVAIPVS---DW---------GPTLAK 214 (419)
T ss_dssp SSSEEEEEECSSH--------------HHHHHHHHHHHHGGGGT--CEEEEEEECCSSCS---CC---------HHHHHH
T ss_pred CCCEEEEEEcCcc--------------hhHHHHHHHHHHHHHcC--CeEEEEecCCCCCc---cH---------HHHHHH
Confidence 8899999874321 23344444443 234 333 3445665431 22 234444
Q ss_pred HHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 151 LKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 151 Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
|+ ++++|.|+.- .+..+....|++.+++.|++.+++.+
T Consensus 215 i~---~~~~d~v~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (419)
T 3h5l_A 215 LR---ADPPAVIVVT-HFYPQDQALFMNQFMTDPTNSLVYLQ 252 (419)
T ss_dssp HH---HSCCSEEEEC-CCCHHHHHHHHHHHTTSCCSCEEEEC
T ss_pred HH---hcCCCEEEEc-cccCchHHHHHHHHHHcCCCceEEec
Confidence 43 3599988763 35566678899999999997776543
No 106
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=61.84 E-value=8.4 Score=38.12 Aligned_cols=141 Identities=16% Similarity=0.208 Sum_probs=78.6
Q ss_pred CCcCEEEecCC-----CCCC----CchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecC--
Q 008423 16 TTRHSATSRWG-----AGGS----TADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRG-- 84 (566)
Q Consensus 16 ~~p~fVsVTwg-----agG~----~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrG-- 84 (566)
...|+|.|..+ .+|. ......++.+.+++..+++++..++.. . ..+.+....+.++|++-|.+..+
T Consensus 124 ~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~-~--~~~~~~a~~l~~~G~d~i~v~~~~~ 200 (311)
T 1ep3_A 124 ANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN-V--TDIVPIAKAVEAAGADGLTMINTLM 200 (311)
T ss_dssp TTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC-S--SCSHHHHHHHHHTTCSEEEECCCEE
T ss_pred CCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-h--HHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 45677766543 2221 123347888888877788888887742 2 23445566778899998876421
Q ss_pred ----CCCCCCCCcc-ccCCCc------ccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHH
Q 008423 85 ----DPPHGQDKFV-QIQGGF------ACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKK 153 (566)
Q Consensus 85 ----Dpp~~~~~~~-~~~~~F------~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~ 153 (566)
++ +...... ...+++ ..+.++++.+++...- --|++.+.- + .+...+
T Consensus 201 g~~i~~-~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~i-pvia~GGI~-------~-------------~~d~~~ 258 (311)
T 1ep3_A 201 GVRFDL-KTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDI-PIIGMGGVA-------N-------------AQDVLE 258 (311)
T ss_dssp ECCBCT-TTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSS-CEEECSSCC-------S-------------HHHHHH
T ss_pred ccccCc-ccCCccccCCCCcccCccchHHHHHHHHHHHHhcCC-CEEEECCcC-------C-------------HHHHHH
Confidence 21 1000000 001111 2356888888765421 122222211 1 223455
Q ss_pred HHHcCCcEE--EeccCCCHHHHHHHHHHHH
Q 008423 154 KVDAGADLI--ITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 154 KvdAGAdFi--ITQlffD~d~f~~f~~~~R 181 (566)
.+++|||.+ -|.++++++.+.++.+.++
T Consensus 259 ~l~~GAd~V~vg~~~l~~p~~~~~i~~~l~ 288 (311)
T 1ep3_A 259 MYMAGASAVAVGTANFADPFVCPKIIDKLP 288 (311)
T ss_dssp HHHHTCSEEEECTHHHHCTTHHHHHHHHHH
T ss_pred HHHcCCCEEEECHHHHcCcHHHHHHHHHHH
Confidence 566899986 4788889888877776655
No 107
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=61.82 E-value=1.3e+02 Score=29.71 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
++.++....+.++.++|+.-|.+-.-..++ |.+ ......++++.+++. . ...+.+-. |.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~----~~p---~~~~~~e~~~~i~~~-~-~~~v~~l~-~n----------- 81 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPK----WVP---QLADSREVMAGIRRA-D-GVRYSVLV-PN----------- 81 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTT----TCG---GGTTHHHHHHHSCCC-S-SSEEEEEC-SS-----------
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCcc----ccc---cccCHHHHHHHHHhC-C-CCEEEEEe-CC-----------
Confidence 688888899999999999999975322221 111 122466777777653 2 23443333 21
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEecc-----------CC----CHHHHHHHHHHHHHcCCC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQL-----------FY----DTDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQl-----------ff----D~d~f~~f~~~~R~~Gi~ 186 (566)
.+-+++-+++|++.|..=. .. +.+.+.+.++.+++.|+.
T Consensus 82 ---------~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~ 135 (295)
T 1ydn_A 82 ---------MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLA 135 (295)
T ss_dssp ---------HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ---------HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 2234556679999764311 01 345556668888888855
No 108
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=61.53 E-value=66 Score=35.44 Aligned_cols=156 Identities=16% Similarity=0.179 Sum_probs=86.0
Q ss_pred HHHHHHHhhcCCceeEEec-------------------------cccCCHHHHHHHH-------HHHHHcCCCEEEEecC
Q 008423 37 DIANRMQNTICVETMMHLT-------------------------CTNMPVEKIDHAL-------QTIKSNGIQNVLALRG 84 (566)
Q Consensus 37 ~la~~lq~~~Gle~i~HLT-------------------------Crd~n~~~L~~~L-------~~a~~~GIrNILaLrG 84 (566)
.++..+++ .|-..+++|. .+-|+.++|++.+ ..|+++|++-|=+=.|
T Consensus 85 ~~~~~vh~-~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~ 163 (671)
T 1ps9_A 85 TITEAVHQ-EGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGS 163 (671)
T ss_dssp HHHHHHHH-TTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHh-cCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 34555564 6878887775 3456666664433 3446789998875544
Q ss_pred C---------CCC--CCCCccc-cCCCcccHHHHHHHHHHHcCCceeEEEEecCCCC-CCCCCCCCCCCccchHHHHHHH
Q 008423 85 D---------PPH--GQDKFVQ-IQGGFACALDLVKHIRSAYGDYFGITVAGYPEGH-PDTIGPDGVASNESYQSDLLYL 151 (566)
Q Consensus 85 D---------pp~--~~~~~~~-~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgH-pe~~~~~~~~~~~~~~~dl~~L 151 (566)
- |.. ..+.|-. .........++|+.+|+..|++|.|++=..|... +...+ . .+..++
T Consensus 164 ~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~---------~-~~~~~~ 233 (671)
T 1ps9_A 164 EGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGT---------F-AETVEL 233 (671)
T ss_dssp BTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCC---------H-HHHHHH
T ss_pred cchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCC---------H-HHHHHH
Confidence 3 211 1111100 0112334788899999999988888886666432 11111 1 344444
Q ss_pred HHHH-HcCCcEEEe------ccC-----CC-HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHH
Q 008423 152 KKKV-DAGADLIIT------QLF-----YD-TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 152 k~Kv-dAGAdFiIT------Qlf-----fD-~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~ 205 (566)
.+++ ++|+|||-. +.+ +. ...+..+.+.+|+. .++||+. .=-|.+...+.++
T Consensus 234 a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~iPvi~-~Ggi~~~~~a~~~ 298 (671)
T 1ps9_A 234 AQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGH-VSLPLVT-TNRINDPQVADDI 298 (671)
T ss_dssp HHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTS-CSSCEEE-CSSCCSHHHHHHH
T ss_pred HHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHh-cCceEEE-eCCCCCHHHHHHH
Confidence 4444 589999842 211 11 11235677777764 4788764 2345555555544
No 109
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.41 E-value=59 Score=33.19 Aligned_cols=120 Identities=16% Similarity=0.184 Sum_probs=66.9
Q ss_pred cccCCHHHHHHHHHH-------HHHcCCCEEEEecCC---------CCCC--CCCccccCCCc----ccHHHHHHHHHHH
Q 008423 56 CTNMPVEKIDHALQT-------IKSNGIQNVLALRGD---------PPHG--QDKFVQIQGGF----ACALDLVKHIRSA 113 (566)
Q Consensus 56 Crd~n~~~L~~~L~~-------a~~~GIrNILaLrGD---------pp~~--~~~~~~~~~~F----~~A~dLVk~Ir~~ 113 (566)
.+.|+.++|++.++. |+++|++-|=+=.|- |... .+.| -+.+ ....++|+.+|+.
T Consensus 131 p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~y---GGslenR~r~~~eiv~avr~~ 207 (340)
T 3gr7_A 131 PKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEY---GGSPENRYRFLGEVIDAVREV 207 (340)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTT---SSSHHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcc---cCCHHHHHHHHHHHHHHHHHh
Confidence 456777777665543 467899988766552 3211 1111 1223 3468889999988
Q ss_pred cCCceeEEEEecCCCCCC-CCCCCCCCCccchHHHHHHHHHHH-HcCCcEEE-eccCC-------CHHHHHHHHHHHHHc
Q 008423 114 YGDYFGITVAGYPEGHPD-TIGPDGVASNESYQSDLLYLKKKV-DAGADLII-TQLFY-------DTDMFLKFVNDCRQI 183 (566)
Q Consensus 114 ~gd~F~IGVAgyPEgHpe-~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI-TQlff-------D~d~f~~f~~~~R~~ 183 (566)
. .|.|+|=-.|....+ ..+. .+..++.+++ ++|+|+|- +--.+ .......+++++|+.
T Consensus 208 v--~~pv~vRls~~~~~~~g~~~----------~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~ 275 (340)
T 3gr7_A 208 W--DGPLFVRISASDYHPDGLTA----------KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE 275 (340)
T ss_dssp C--CSCEEEEEESCCCSTTSCCG----------GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH
T ss_pred c--CCceEEEeccccccCCCCCH----------HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH
Confidence 7 488998888863321 1111 2344444443 57999874 21111 112234566666664
Q ss_pred CCCCcEEe
Q 008423 184 GITCPIVP 191 (566)
Q Consensus 184 Gi~vPIIp 191 (566)
+++||+.
T Consensus 276 -~~iPVi~ 282 (340)
T 3gr7_A 276 -ADIPTGA 282 (340)
T ss_dssp -TTCCEEE
T ss_pred -cCCcEEe
Confidence 3577664
No 110
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=61.31 E-value=1.3e+02 Score=29.72 Aligned_cols=128 Identities=12% Similarity=0.154 Sum_probs=76.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
..+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~--------- 80 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVAVG-T---TGES---PTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNC--------- 80 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSS---------
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC---------
Confidence 35889999999999999999999764 2 1221 1122233566777766554333 333443311
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.==.|- .+|+
T Consensus 81 --------t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn~P~-----------~tg~ 140 (289)
T 2yxg_A 81 --------TEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAES-INLPIVLYNVPS-----------RTAV 140 (289)
T ss_dssp --------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEECHH-----------HHSC
T ss_pred --------HHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-cCCCEEEEeCcc-----------ccCc
Confidence 1234555555556899964 445665 677778877776654 368987544332 1355
Q ss_pred CCCHHHHHHh
Q 008423 212 KIPAEITAAL 221 (566)
Q Consensus 212 ~VP~~il~~L 221 (566)
.++.+.+.+|
T Consensus 141 ~l~~~~~~~L 150 (289)
T 2yxg_A 141 NLEPKTVKLL 150 (289)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 5665555555
No 111
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=61.14 E-value=1.4e+02 Score=29.88 Aligned_cols=128 Identities=10% Similarity=0.076 Sum_probs=76.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++.+.+.|++.|+++. - .|+. ..-..+.-.++++...+..+.. .-+|+.++ +
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~G-t---TGE~---~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~--------~-- 91 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGG-S---TGEA---FVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV--------S-- 91 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESS-T---TTTG---GGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS--------S--
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECe-e---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC--------C--
Confidence 5889999999999999999999774 2 1221 1122334566777766654333 33344331 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCC-CcEEeeecccCCHHHHHHHhccCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGIT-CPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~-vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .+ +||+.==.|- .+|+
T Consensus 92 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~~lPiilYn~P~-----------~tg~ 152 (303)
T 2wkj_A 92 -------TAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDS-ADGLPMVVYNIPA-----------LSGV 152 (303)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-HTTCCEEEEECHH-----------HHCC
T ss_pred -------HHHHHHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHh-CCCCCEEEEeCcc-----------ccCC
Confidence 1234555555556899954 455666 677788877776654 24 8886533332 2356
Q ss_pred CCCHHHHHHhC
Q 008423 212 KIPAEITAALE 222 (566)
Q Consensus 212 ~VP~~il~~Le 222 (566)
.++.+.+.+|.
T Consensus 153 ~l~~~~~~~La 163 (303)
T 2wkj_A 153 KLTLDQINTLV 163 (303)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHh
Confidence 66666666664
No 112
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=60.37 E-value=32 Score=35.55 Aligned_cols=128 Identities=12% Similarity=0.034 Sum_probs=76.8
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe---------cCCCCCCC-CCc---cccCCC
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL---------RGDPPHGQ-DKF---VQIQGG 99 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL---------rGDpp~~~-~~~---~~~~~~ 99 (566)
+...++.+.+++...+++..=++. +.+..++.+.++.+.+.||.-|-++ .+..+... ... -.....
T Consensus 179 e~l~~il~av~~~~~~PV~vKi~p-~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai 257 (345)
T 3oix_A 179 ETTDQILSEVFTYFTKPLGIKLPP-YFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYV 257 (345)
T ss_dssp HHHHHHHHHHTTTCCSCEEEEECC-CCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGG
T ss_pred HHHHHHHHHHHHHhCCCeEEEECC-CCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccc
Confidence 345677777777778888888886 4788888888888888888755433 11111100 000 000122
Q ss_pred cccHHHHHHHHHHHcCCcee-EEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE--ec-cCCCHHHHHH
Q 008423 100 FACALDLVKHIRSAYGDYFG-ITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII--TQ-LFYDTDMFLK 175 (566)
Q Consensus 100 F~~A~dLVk~Ir~~~gd~F~-IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--TQ-lffD~d~f~~ 175 (566)
+..|.++|+.|++..+...- ||+.+.= + .+...+++.+|||.++ |- ++.++..+.+
T Consensus 258 ~p~a~~~v~~i~~~~~~~ipIIg~GGI~-------s-------------~~da~~~l~aGAd~V~igra~~~~gP~~~~~ 317 (345)
T 3oix_A 258 KPTALANVHAFYKRLNPSIQIIGTGGVX-------T-------------GRDAFEHILCGASMVQIGTALHQEGPQIFKR 317 (345)
T ss_dssp HHHHHHHHHHHHTTSCTTSEEEEESSCC-------S-------------HHHHHHHHHHTCSEEEESHHHHHHCTHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCCcEEEECCCC-------C-------------hHHHHHHHHhCCCEEEEChHHHhcChHHHHH
Confidence 44578899999987753343 4444311 1 2334566679999864 55 3457777777
Q ss_pred HHHHHH
Q 008423 176 FVNDCR 181 (566)
Q Consensus 176 f~~~~R 181 (566)
+.+.++
T Consensus 318 i~~~L~ 323 (345)
T 3oix_A 318 ITKELX 323 (345)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665554
No 113
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=59.57 E-value=1.1e+02 Score=28.41 Aligned_cols=146 Identities=17% Similarity=0.216 Sum_probs=75.4
Q ss_pred cCCceeEEeccccCCHHHHHHHHHHHHHcCCCE-EEEecCCCCCCCCCccccCCC-cccHHHHHHHHHHHcCCceeEEEE
Q 008423 46 ICVETMMHLTCTNMPVEKIDHALQTIKSNGIQN-VLALRGDPPHGQDKFVQIQGG-FACALDLVKHIRSAYGDYFGITVA 123 (566)
Q Consensus 46 ~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrN-ILaLrGDpp~~~~~~~~~~~~-F~~A~dLVk~Ir~~~gd~F~IGVA 123 (566)
.|++ +.|+..++.+..++...+..+...++.. -|.+. |....... ....+. +......++.+|+..+ ...+|+.
T Consensus 41 ~G~~-~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v~-~~~~~a~~-~gad~v~l~~~~~~~~~~~~~~~-~~~ig~s 116 (221)
T 1yad_A 41 NEVD-FIHIRERSKSAADILKLLDLIFEGGIDKRKLVMN-GRVDIALF-STIHRVQLPSGSFSPKQIRARFP-HLHIGRS 116 (221)
T ss_dssp GGCS-EEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEEE-SCHHHHHT-TTCCEEEECTTSCCHHHHHHHCT-TCEEEEE
T ss_pred CCCC-EEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEEe-ChHHHHHH-cCCCEEEeCCCccCHHHHHHHCC-CCEEEEE
Confidence 5776 6799888888888888888887765431 12233 21100000 000010 1111112455565554 4678876
Q ss_pred ecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHH-------HHHHHHHHHcCCCCcEEe--eec
Q 008423 124 GYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMF-------LKFVNDCRQIGITCPIVP--GIM 194 (566)
Q Consensus 124 gyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f-------~~f~~~~R~~Gi~vPIIp--GIm 194 (566)
. | +. .+ +++=.++||||++.=.+|+...+ .+.++.+++. .++||++ ||
T Consensus 117 v----~----t~----------~~---~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~-~~~pvia~GGI- 173 (221)
T 1yad_A 117 V----H----SL----------EE---AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQR-ISIPVIAIGGM- 173 (221)
T ss_dssp E----C----SH----------HH---HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHH-CCSCEEEESSC-
T ss_pred c----C----CH----------HH---HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHh-CCCCEEEECCC-
Confidence 5 2 11 22 33344689999987666654332 2445555443 2678754 67
Q ss_pred ccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 195 PINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 195 PI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
-..+...+.. +...|+.+-..+..
T Consensus 174 ~~~nv~~~~~-~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 174 TPDRLRDVKQ-AGADGIAVMSGIFS 197 (221)
T ss_dssp CGGGHHHHHH-TTCSEEEESHHHHT
T ss_pred CHHHHHHHHH-cCCCEEEEhHHhhC
Confidence 4455555543 34556667777653
No 114
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=58.68 E-value=58 Score=32.86 Aligned_cols=123 Identities=17% Similarity=0.151 Sum_probs=73.8
Q ss_pred CcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccC--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcc
Q 008423 17 TRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNM--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFV 94 (566)
Q Consensus 17 ~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~ 94 (566)
..||+=.-||...-... --+....++ .+|+.+.+==|.--. .+..+++.|..|+++|++.|=+=.|--.-.
T Consensus 65 yID~lKfg~GTs~l~~~-l~ekI~l~~-~~gV~v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~----- 137 (276)
T 1u83_A 65 YIDFVKFGWGTSLLTKD-LEEKISTLK-EHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMT----- 137 (276)
T ss_dssp GCCEEEECTTGGGGCTT-HHHHHHHHH-HTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCC-----
T ss_pred hcceEEecCcchhhhHH-HHHHHHHHH-HcCCeEeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCC-----
Confidence 45787777765544433 334445555 489998876543222 223899999999999999987655543321
Q ss_pred ccCCCcccHHHHHHHHHHHcCCceeEEE-Eec--CCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEec
Q 008423 95 QIQGGFACALDLVKHIRSAYGDYFGITV-AGY--PEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQ 165 (566)
Q Consensus 95 ~~~~~F~~A~dLVk~Ir~~~gd~F~IGV-Agy--PEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQ 165 (566)
.-+..++|++.... |.+=. .|. |+.. ... +++.-++.+++=++|||+.||.-
T Consensus 138 --------~~~~~~lI~~a~~~-f~Vl~EvG~K~~~~~-~~~---------~~~~~I~~~~~dLeAGA~~ViiE 192 (276)
T 1u83_A 138 --------NKEKAAYIADFSDE-FLVLSEVGSKDAELA-SRQ---------SSEEWLEYIVEDMEAGAEKVITE 192 (276)
T ss_dssp --------HHHHHHHHHHHTTT-SEEEEECSCCC-------C---------CSTHHHHHHHHHHHHTEEEEEEC
T ss_pred --------HHHHHHHHHHHHhh-cEEeeeccccCcccc-CCC---------CHHHHHHHHHHHHHCCCcEEEEe
Confidence 34445566654332 43321 111 2111 112 23378999999999999999874
No 115
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=58.58 E-value=88 Score=29.60 Aligned_cols=172 Identities=13% Similarity=0.089 Sum_probs=86.3
Q ss_pred hccCCCcCEEEecCCCCCCC-chhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCC
Q 008423 12 AWWPTTRHSATSRWGAGGST-ADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQ 90 (566)
Q Consensus 12 ~~~~~~p~fVsVTwgagG~~-~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~ 90 (566)
++.....+++.|....+... ....+++.+.+.+..+++++.|.-.+ +.+. +..+.++|+.-|++=+.....
T Consensus 38 ~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~--~~~~----~~~~~~~Gad~V~lg~~~l~~-- 109 (253)
T 1thf_D 38 FYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIH--DFET----ASELILRGADKVSINTAAVEN-- 109 (253)
T ss_dssp HHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCC--SHHH----HHHHHHTTCSEEEESHHHHHC--
T ss_pred HHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCC--CHHH----HHHHHHcCCCEEEEChHHHhC--
Confidence 44455677888876543321 23356666777777788888875443 3333 444456798877643322211
Q ss_pred CCccccCCCcccHHHHHHHHHHHcCC-ceeEEEEecC-CC------CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcE-
Q 008423 91 DKFVQIQGGFACALDLVKHIRSAYGD-YFGITVAGYP-EG------HPDTIGPDGVASNESYQSDLLYLKKKVDAGADL- 161 (566)
Q Consensus 91 ~~~~~~~~~F~~A~dLVk~Ir~~~gd-~F~IGVAgyP-Eg------Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdF- 161 (566)
.++++.+.+.+|. ...+++...- +| |.-.... .. ...+.+++=.++|++.
T Consensus 110 -------------p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~-----~~---~~~e~~~~~~~~G~~~i 168 (253)
T 1thf_D 110 -------------PSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNT-----GI---LLRDWVVEVEKRGAGEI 168 (253)
T ss_dssp -------------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEE-----EE---EHHHHHHHHHHTTCSEE
T ss_pred -------------hHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCcccc-----CC---CHHHHHHHHHHCCCCEE
Confidence 1234444445553 2344544420 11 1100000 00 1234444445689984
Q ss_pred EEec-------cCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHHH
Q 008423 162 IITQ-------LFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEIT 218 (566)
Q Consensus 162 iITQ-------lffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~il 218 (566)
++|- .-+|.+.+.+ +++. .++||+++ -.|.+...+.++.+ ..|+-|=..+.
T Consensus 169 ~~~~~~~~g~~~g~~~~~~~~----l~~~-~~ipvia~-GGI~~~~d~~~~~~~Gadgv~vGsal~ 228 (253)
T 1thf_D 169 LLTSIDRDGTKSGYDTEMIRF----VRPL-TTLPIIAS-GGAGKMEHFLEAFLAGADAALAASVFH 228 (253)
T ss_dssp EEEETTTTTSCSCCCHHHHHH----HGGG-CCSCEEEE-SCCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred EEEeccCCCCCCCCCHHHHHH----HHHh-cCCCEEEE-CCCCCHHHHHHHHHcCChHHHHHHHHH
Confidence 4452 2246555544 4433 36898763 35666666655443 33444555554
No 116
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=58.52 E-value=36 Score=38.12 Aligned_cols=110 Identities=15% Similarity=0.169 Sum_probs=69.5
Q ss_pred ceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc-----------CCCHHHHHHHHHHHHHcCC
Q 008423 117 YFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL-----------FYDTDMFLKFVNDCRQIGI 185 (566)
Q Consensus 117 ~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl-----------ffD~d~f~~f~~~~R~~Gi 185 (566)
.|..|+.-|||..|. ...++|++.|| ++|.+.+-+.. .||.+.+.++++.|+++||
T Consensus 8 ~~~~G~~y~pe~w~~----------~~~~~Dl~~mk---~~G~n~vr~~if~W~~~eP~~g~~~f~~ld~~i~~~~~~Gi 74 (675)
T 3tty_A 8 KIWYGGDYNPEQWDK----------ATMEEDMRMFN---LAGIDVATVNVFSWAKIQRDEVSYDFTWLDDIIERLTKENI 74 (675)
T ss_dssp SCEEEEECCGGGSCH----------HHHHHHHHHHH---HHTCCEEEECSSCHHHHBSSSSCBCCHHHHHHHHHHHHTTC
T ss_pred CceEeeeCChhhCCH----------HHHHHHHHHHH---HcCCCEEEEeeechhhhCCcCCccCHHHHHHHHHHHHHCCC
Confidence 589999999997632 12335555554 57999988865 3677889999999999996
Q ss_pred CCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCC------------------CCCCHHHHHHHHHHHHHHHHHHHH
Q 008423 186 TCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEP------------------IKDNEEAVKAYGIHLGAEMCKKIL 247 (566)
Q Consensus 186 ~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~------------------~kddde~vk~~Gv~la~e~i~~L~ 247 (566)
. +|.++.+ ...|.++.++.-. ..-++...+++-.+++.+++++..
T Consensus 75 ~--vil~~~~---------------~~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~ 137 (675)
T 3tty_A 75 Y--LCLATST---------------GAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYK 137 (675)
T ss_dssp E--EEEECCT---------------TSCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTT
T ss_pred E--EEEeCCC---------------CCCChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 6 4544332 2456665544210 001234466666666666776666
Q ss_pred HcC-CCeEEE
Q 008423 248 AHG-IKTLHL 256 (566)
Q Consensus 248 ~~G-v~GiHf 256 (566)
+.+ |.++|+
T Consensus 138 ~~p~Vi~w~v 147 (675)
T 3tty_A 138 DHPQIVMWHV 147 (675)
T ss_dssp TCTTEEEEEC
T ss_pred CCCcEEEEEE
Confidence 543 555554
No 117
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=58.43 E-value=66 Score=30.98 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEe
Q 008423 146 SDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVP 191 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIp 191 (566)
..+.+|++ +++|.|+.-. +......+++.+++.|+++|++.
T Consensus 184 ~~~~~l~~---~~~d~i~~~~--~~~~a~~~~~~~~~~g~~~~~~~ 224 (346)
T 1usg_A 184 ALIARLKK---ENIDFVYYGG--YYPEMGQMLRQARSVGLKTQFMG 224 (346)
T ss_dssp HHHHHHHH---TTCCEEEEES--CHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHh---cCCCEEEEcC--cchHHHHHHHHHHHcCCCCeEEe
Confidence 44555543 5888887632 33445689999999999999664
No 118
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.34 E-value=1.3e+02 Score=28.85 Aligned_cols=176 Identities=13% Similarity=0.196 Sum_probs=96.9
Q ss_pred CCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH
Q 008423 28 GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV 107 (566)
Q Consensus 28 gG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV 107 (566)
+|.+....+++++.+++..+++++. ++.. |. .....++.+.++|++.+.+ .|-+. ..+.+++
T Consensus 75 ~g~~~~~~~~~i~~ir~~~~~Pv~~-m~~~--~~-~~~~~~~~a~~aGadgv~v--~d~~~------------~~~~~~~ 136 (262)
T 1rd5_A 75 SGTTMDAVLEMLREVTPELSCPVVL-LSYY--KP-IMFRSLAKMKEAGVHGLIV--PDLPY------------VAAHSLW 136 (262)
T ss_dssp TTCCHHHHHHHHHHHGGGCSSCEEE-ECCS--HH-HHSCCTHHHHHTTCCEEEC--TTCBT------------TTHHHHH
T ss_pred cCCCHHHHHHHHHHHHhcCCCCEEE-EecC--cH-HHHHHHHHHHHcCCCEEEE--cCCCh------------hhHHHHH
Confidence 3334445678888888766666433 2211 22 1122234488999998885 33321 2477888
Q ss_pred HHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc-------CCCHHHHHHHHHHH
Q 008423 108 KHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL-------FYDTDMFLKFVNDC 180 (566)
Q Consensus 108 k~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl-------ffD~d~f~~f~~~~ 180 (566)
+.+++ +|-...+++ .|... .+.++.+.+. ..|..+++|=+ -+. ....++++++
T Consensus 137 ~~~~~-~g~~~i~~~--a~~t~---------------~e~~~~~~~~-~~g~v~~~s~~G~tG~~~~~~-~~~~~~i~~v 196 (262)
T 1rd5_A 137 SEAKN-NNLELVLLT--TPAIP---------------EDRMKEITKA-SEGFVYLVSVNGVTGPRANVN-PRVESLIQEV 196 (262)
T ss_dssp HHHHH-TTCEECEEE--CTTSC---------------HHHHHHHHHH-CCSCEEEECSSCCBCTTSCBC-THHHHHHHHH
T ss_pred HHHHH-cCCceEEEE--CCCCC---------------HHHHHHHHhc-CCCeEEEecCCCCCCCCcCCC-chHHHHHHHH
Confidence 88875 553333333 34211 0223333222 12333344311 122 3345678888
Q ss_pred HHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 008423 181 RQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILA 248 (566)
Q Consensus 181 R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~ 248 (566)
|+.. ++||++| -.|.|...+..+.+ -.|+.|-..+.+.++..+ +++. ..+.+.++++.|+.
T Consensus 197 ~~~~-~~pI~vg-GGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~-~~~~----~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 197 KKVT-NKPVAVG-FGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAA-SPKQ----GLRRLEEYARGMKN 259 (262)
T ss_dssp HHHC-SSCEEEE-SCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSS-SHHH----HHHHHHHHHHHHHH
T ss_pred Hhhc-CCeEEEE-CCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhcc-ChhH----HHHHHHHHHHHHHH
Confidence 8763 7898775 47888888877655 456778899998886432 2221 23345566666653
No 119
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=58.26 E-value=63 Score=32.95 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=64.0
Q ss_pred cchhhccCCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccC-CHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 8 SGWTAWWPTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNM-PVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 8 ~~~~~~~~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~-n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
++..+......+.|.|.... +..+...+.+..+++ .|++++..+.|..+ +.+.+.+..+.+.++|+.-| .|. |-
T Consensus 97 ~~i~~a~~aGvd~v~I~~~~--s~~~~~~~~i~~ak~-~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i-~l~-DT 171 (345)
T 1nvm_A 97 HDLKNAYQAGARVVRVATHC--TEADVSKQHIEYARN-LGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCI-YMA-DS 171 (345)
T ss_dssp HHHHHHHHHTCCEEEEEEET--TCGGGGHHHHHHHHH-HTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEE-EEE-CT
T ss_pred HHHHHHHhCCcCEEEEEEec--cHHHHHHHHHHHHHH-CCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEE-EEC-CC
Confidence 34444444555555554311 112456666777775 69999999866554 67889999999999999854 442 32
Q ss_pred CCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEe
Q 008423 87 PHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAG 124 (566)
Q Consensus 87 p~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAg 124 (566)
... ..-....+||+.+|+..++...|++-+
T Consensus 172 ~G~--------~~P~~v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 172 GGA--------MSMNDIRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp TCC--------CCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred cCc--------cCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 211 111247889999998875335566544
No 120
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=58.08 E-value=38 Score=34.87 Aligned_cols=125 Identities=14% Similarity=0.199 Sum_probs=69.1
Q ss_pred ccccCCHHHHHHHHHH-------HHHcCCCEEEEecCC---------CCCC--CCCccccCCCcc----cHHHHHHHHHH
Q 008423 55 TCTNMPVEKIDHALQT-------IKSNGIQNVLALRGD---------PPHG--QDKFVQIQGGFA----CALDLVKHIRS 112 (566)
Q Consensus 55 TCrd~n~~~L~~~L~~-------a~~~GIrNILaLrGD---------pp~~--~~~~~~~~~~F~----~A~dLVk~Ir~ 112 (566)
+.+.|+.++|++.++. |+++|++-|=+=.|- |... .+.| -+.+. ...++|+.||+
T Consensus 144 ~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~y---GGslenR~r~~~eiv~aVr~ 220 (363)
T 3l5l_A 144 VPREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAY---GGSFDNRSRFLLETLAAVRE 220 (363)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTT---SSSHHHHHHHHHHHHHHHHT
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCccc---CcCHHHHHHHHHHHHHHHHH
Confidence 4577888888776543 467899887755442 2111 1111 12233 46888999999
Q ss_pred HcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHH-HcCCcEEE-eccCC--------CHHHHHHHHHHHHH
Q 008423 113 AYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKV-DAGADLII-TQLFY--------DTDMFLKFVNDCRQ 182 (566)
Q Consensus 113 ~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI-TQlff--------D~d~f~~f~~~~R~ 182 (566)
..|++|.|||=..|....+... .+ ..+..++.+++ ++|+|+|- +.-.+ .......+.+.+|+
T Consensus 221 avg~d~pV~vRis~~~~~~~G~-------~~-~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~ 292 (363)
T 3l5l_A 221 VWPENLPLTARFGVLEYDGRDE-------QT-LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRR 292 (363)
T ss_dssp TSCTTSCEEEEEEEECSSSCHH-------HH-HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHH
T ss_pred HcCCCceEEEEecchhcCCCCC-------CC-HHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHH
Confidence 8888898998877742211000 01 13445555554 57999874 32110 11123445556665
Q ss_pred cCCCCcEEe
Q 008423 183 IGITCPIVP 191 (566)
Q Consensus 183 ~Gi~vPIIp 191 (566)
. .++||+.
T Consensus 293 ~-~~iPVi~ 300 (363)
T 3l5l_A 293 E-AKLPVTS 300 (363)
T ss_dssp H-HTCCEEE
T ss_pred H-cCCcEEE
Confidence 4 2577664
No 121
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=58.03 E-value=1.4e+02 Score=31.55 Aligned_cols=130 Identities=12% Similarity=0.162 Sum_probs=74.8
Q ss_pred CCCCchhHHHHHHHHHhhcCCceeEEecc----cc------------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC
Q 008423 28 GGSTADLTLDIANRMQNTICVETMMHLTC----TN------------MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 91 (566)
Q Consensus 28 gG~~~~~Sl~la~~lq~~~Gle~i~HLTC----rd------------~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~ 91 (566)
|+..+..++.++..+.. .+++.|.+-+. ++ .+..+....+.-++..|.+.|-+|.-|...+
T Consensus 134 G~~~S~~s~ava~i~~~-~~iP~Is~~a~~~~lsd~~~~p~~frt~psd~~~~~ai~~ll~~fgw~~V~li~~dd~~G-- 210 (496)
T 3ks9_A 134 GPGSSSVAIQVQNLLQL-FDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYG-- 210 (496)
T ss_dssp CCSSHHHHHHHHHHHGG-GTCCEEESSCCCGGGGCTTTCTTEEESSCCTHHHHHHHHHHHHHTTCCEEEEEEESSHHH--
T ss_pred CCCccHHHHHHHHHHhh-cceeEECCCcCCccccCccCCCceEEecCChHHHHHHHHHHHHHcCCcEEEEEEeccHHH--
Confidence 33445667777777764 67776554221 11 1223334444445789999999886443210
Q ss_pred CccccCCCcccHHHHHHHHHHHcCCceeEEEE-ecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHc---CCcEEEeccC
Q 008423 92 KFVQIQGGFACALDLVKHIRSAYGDYFGITVA-GYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDA---GADLIITQLF 167 (566)
Q Consensus 92 ~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA-gyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdA---GAdFiITQlf 167 (566)
-..+..+.+.++ +.| .||... .+|.... ..+...+.+|+.+ .|++||. +
T Consensus 211 --------~~~~~~~~~~~~-~~G--i~v~~~~~i~~~~~--------------~~d~~~~l~~i~~~~~~a~vii~--~ 263 (496)
T 3ks9_A 211 --------ESGMDAFKELAA-QEG--LSIAHSDKIYSNAG--------------EKSFDRLLRKLRERLPKARVVVC--F 263 (496)
T ss_dssp --------HHHHHHHHHHHH-HTT--CEEEEEEEECTTCC--------------HHHHHHHHHHHHTTTTTTCEEEE--E
T ss_pred --------HHHHHHHHHHHH-HcC--ceEEEEEEECCCCC--------------HHHHHHHHHHHHhccCceEEEEE--e
Confidence 011223333343 344 466543 3453211 1566667777765 7888775 5
Q ss_pred CCHHHHHHHHHHHHHcCCCC
Q 008423 168 YDTDMFLKFVNDCRQIGITC 187 (566)
Q Consensus 168 fD~d~f~~f~~~~R~~Gi~v 187 (566)
.+.+.+..+++.+++.|++-
T Consensus 264 ~~~~~~~~l~~~~~~~g~~~ 283 (496)
T 3ks9_A 264 CEGMTVRGLLSAMRRLGVVG 283 (496)
T ss_dssp CCHHHHHHHHHHHHHHTCCS
T ss_pred cChHHHHHHHHHHHHhCCCC
Confidence 67788889999999999763
No 122
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=57.43 E-value=86 Score=31.08 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=81.8
Q ss_pred CceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCC----CCCCcc-----ccCCCcc--cHHHHHHHHHHHcCC
Q 008423 48 VETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH----GQDKFV-----QIQGGFA--CALDLVKHIRSAYGD 116 (566)
Q Consensus 48 le~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~----~~~~~~-----~~~~~F~--~A~dLVk~Ir~~~gd 116 (566)
.-.++|+|+-+-+.+...+.+..+.+. ++-|. | |=|-. .+..=+ ....+.+ ...++|+.+|+..
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IE-l-G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~-- 90 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVLPY-ADLLE-I-GLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT-- 90 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEE-E-ECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHhc-CCEEE-E-CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--
Confidence 346999999999998888888777776 55544 4 43321 110000 0112232 2467888888763
Q ss_pred ceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCc-EEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 117 YFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGAD-LIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 117 ~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAd-FiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
..-|++-+|.+.- ... .-...+++=.++||| +|+-.+-+ +...+|.+.|++.|+ ++++=+-|
T Consensus 91 ~~Pii~m~y~n~v-~~~------------g~~~f~~~~~~aG~dGviv~Dl~~--ee~~~~~~~~~~~gl--~~i~liap 153 (271)
T 1ujp_A 91 EKPLFLMTYLNPV-LAW------------GPERFFGLFKQAGATGVILPDLPP--DEDPGLVRLAQEIGL--ETVFLLAP 153 (271)
T ss_dssp CSCEEEECCHHHH-HHH------------CHHHHHHHHHHHTCCEEECTTCCG--GGCHHHHHHHHHHTC--EEECEECT
T ss_pred CCCEEEEecCcHH-HHh------------hHHHHHHHHHHcCCCEEEecCCCH--HHHHHHHHHHHHcCC--ceEEEeCC
Confidence 2456666666410 000 012334555578999 56655554 667889999999995 35554556
Q ss_pred cCCHHHHHHHhc
Q 008423 196 INNYKGFLRMTG 207 (566)
Q Consensus 196 I~s~~~~~r~~~ 207 (566)
..+...+..+++
T Consensus 154 ~s~~eri~~ia~ 165 (271)
T 1ujp_A 154 TSTDARIATVVR 165 (271)
T ss_dssp TCCHHHHHHHHT
T ss_pred CCCHHHHHHHHH
Confidence 677776665544
No 123
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=57.24 E-value=1.1e+02 Score=29.69 Aligned_cols=134 Identities=11% Similarity=0.111 Sum_probs=81.3
Q ss_pred eEEeccccC--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 51 MMHLTCTNM--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 51 i~HLTCrd~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
|+++.--+. +.+.|+-++++|+++||++|++-. ..|+ .|..+.+.+ .+ .|=|..|+.|
T Consensus 25 i~YF~~~G~eNT~~tl~la~era~e~~Ik~iVVAS----ssG~----------TA~k~~e~~----~~--~lVvVTh~~G 84 (206)
T 1t57_A 25 ICYFEEPGKENTERVLELVGERADQLGIRNFVVAS----VSGE----------TALRLSEMV----EG--NIVSVTHHAG 84 (206)
T ss_dssp EEEESSCSGGGHHHHHHHHHHHHHHHTCCEEEEEC----SSSH----------HHHHHHTTC----CS--EEEEECCCTT
T ss_pred EEEecCCCcccHHHHHHHHHHHHHHcCCCEEEEEe----CCCH----------HHHHHHHHc----cC--CEEEEeCcCC
Confidence 566665444 457888889999999999999753 2221 254444322 22 7778888877
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF 208 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l 208 (566)
-.+.... -|+.+. .+++++.| ++|+-|=+++.......+ .++
T Consensus 85 F~~pg~~-------------------------------e~~~e~----~~~L~~~G--~~V~t~tH~lsG~eR~is-~kf 126 (206)
T 1t57_A 85 FREKGQL-------------------------------ELEDEA----RDALLERG--VNVYAGSHALSGVGRGIS-NRF 126 (206)
T ss_dssp SSSTTCC-------------------------------SSCHHH----HHHHHHHT--CEEECCSCTTTTHHHHHH-HHH
T ss_pred CCCCCCC-------------------------------cCCHHH----HHHHHhCC--CEEEEeeccccchhHHHH-Hhc
Confidence 5332111 122222 34455556 567777777777654322 245
Q ss_pred CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 209 CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 209 ~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
-|+.-++-+-+.|+-.. -|++.|+|+.-...|.|
T Consensus 127 GG~~p~eiiA~tLR~fg--------qG~KV~vEi~lMAaDAG 160 (206)
T 1t57_A 127 GGVTPVEIMAETLRMVS--------QGFKVCVEIAIMAADAG 160 (206)
T ss_dssp CSCCHHHHHHHHHTTTC--------HHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHhC--------CCceEEEEEeeeeecCC
Confidence 55554444556776443 48999999888888875
No 124
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=57.10 E-value=95 Score=28.38 Aligned_cols=64 Identities=20% Similarity=0.296 Sum_probs=37.1
Q ss_pred HHHHcCCcEEEeccCCCHH-------HHHHHHHHHHHcCCCCcEEe--eecccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 153 KKVDAGADLIITQLFYDTD-------MFLKFVNDCRQIGITCPIVP--GIMPINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 153 ~KvdAGAdFiITQlffD~d-------~f~~f~~~~R~~Gi~vPIIp--GImPI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
+-.++|+|+++...+|+.. .-.+.++.+++. .++||++ ||- ..+.+.+.. +...|+.+-..+.+
T Consensus 123 ~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~pvia~GGI~-~~nv~~~~~-~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 123 EAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVES-VKIPVVAIGGIN-KDNAREVLK-TGVDGIAVISAVMG 195 (215)
T ss_dssp HHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHH-CSSCEEEESSCC-TTTHHHHHT-TTCSEEEESHHHHT
T ss_pred HHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHh-CCCCEEEECCcC-HHHHHHHHH-cCCCEEEEhHHHhC
Confidence 3456899999988766431 112334444443 2678764 566 556655543 34556777777653
No 125
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=57.10 E-value=1.8e+02 Score=30.10 Aligned_cols=158 Identities=13% Similarity=0.092 Sum_probs=84.1
Q ss_pred CCCCCchhHHHHHHHHHhhcCCceeEEeccc----cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCccc
Q 008423 27 AGGSTADLTLDIANRMQNTICVETMMHLTCT----NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFAC 102 (566)
Q Consensus 27 agG~~~~~Sl~la~~lq~~~Gle~i~HLTCr----d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~ 102 (566)
+..+...++...+..++. .|+=+. -+|.- ..+.+.+++.++...+.|++.|+++. ..|+. ..-..+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~-~Gi~~a-lvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~G----TTGE~---~~Ls~eE 113 (360)
T 4dpp_A 43 PMRSLEVKNRTNTDDIKA-LRVITA-IKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGG----TTGEG---QLMSWDE 113 (360)
T ss_dssp -----------CHHHHHT-CCEEEE-CCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESS----TTTTG---GGSCHHH
T ss_pred ccCCHhHhhccChhhccc-CCeEEE-EeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecc----cccCh---hhCCHHH
Confidence 333333344444444442 354332 23332 24889999999999999999999764 11221 1112233
Q ss_pred HHHHHHHHHHHcCCce--eEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYF--GITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKF 176 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F--~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f 176 (566)
=.++++...+..+... -+|+.++ +.++-++..+.=.++|||.+ +.-++| +.+.+.++
T Consensus 114 r~~vi~~~ve~~~grvpViaGvg~~-----------------st~eai~la~~A~~~Gadavlvv~PyY~k~sq~gl~~h 176 (360)
T 4dpp_A 114 HIMLIGHTVNCFGGSIKVIGNTGSN-----------------STREAIHATEQGFAVGMHAALHINPYYGKTSIEGLIAH 176 (360)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCS-----------------SHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEecCCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHH
Confidence 4567777666544333 3333221 12244555555567899963 444555 56677777
Q ss_pred HHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCC
Q 008423 177 VNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPI 224 (566)
Q Consensus 177 ~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~ 224 (566)
.+.+-++ +||+.==.|- .+|+.++.+.+.+|...
T Consensus 177 f~~IA~a---~PiilYNiP~-----------rTg~~ls~e~l~~La~~ 210 (360)
T 4dpp_A 177 FQSVLHM---GPTIIYNVPG-----------RTGQDIPPRAIFKLSQN 210 (360)
T ss_dssp HHTTGGG---SCEEEEECHH-----------HHSCCCCHHHHHHHTTS
T ss_pred HHHHHHh---CCEEEEeCCc-----------ccCCCCCHHHHHHHhcC
Confidence 7766554 5765332222 25788888888888654
No 126
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=56.84 E-value=60 Score=31.31 Aligned_cols=143 Identities=12% Similarity=0.056 Sum_probs=76.1
Q ss_pred HHHHHHHHHhhcCCceeEEecccc-----C--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTN-----M--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV 107 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd-----~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV 107 (566)
+.+-...+++..+++++-- ..++ . +. -.+.+..+.++|++-|++....-.+. ....+++
T Consensus 57 ~~~~i~~ir~~v~~Pvig~-~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~~~~~~~p-----------~~l~~~i 122 (229)
T 3q58_A 57 GIENLRTVRPHLSVPIIGI-IKRDLTGSPVRITP--YLQDVDALAQAGADIIAFDASFRSRP-----------VDIDSLL 122 (229)
T ss_dssp SHHHHHHHGGGCCSCEEEE-CBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEECCSSCCS-----------SCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEE-EeecCCCCceEeCc--cHHHHHHHHHcCCCEEEECccccCCh-----------HHHHHHH
Confidence 4555667777677776522 2222 1 11 11234567789999887655432111 1367888
Q ss_pred HHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC-CC-----HHHHHHHHHHHH
Q 008423 108 KHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF-YD-----TDMFLKFVNDCR 181 (566)
Q Consensus 108 k~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf-fD-----~d~f~~f~~~~R 181 (566)
+.+++ .| ..+.+ +-|. .+.+++=.++|||+|.|-+. |. ...-.+++++++
T Consensus 123 ~~~~~-~g--~~v~~----~v~t-----------------~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~ 178 (229)
T 3q58_A 123 TRIRL-HG--LLAMA----DCST-----------------VNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLS 178 (229)
T ss_dssp HHHHH-TT--CEEEE----ECSS-----------------HHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHH
T ss_pred HHHHH-CC--CEEEE----ecCC-----------------HHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHH
Confidence 88876 34 33333 2231 22334456799999976433 21 011124566666
Q ss_pred HcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHHH
Q 008423 182 QIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEIT 218 (566)
Q Consensus 182 ~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~il 218 (566)
+. ++|||+. =.|.|...+.++.+ ..|+-|=..+.
T Consensus 179 ~~--~ipvIA~-GGI~t~~d~~~~~~~GadgV~VGsai~ 214 (229)
T 3q58_A 179 HA--GCRVIAE-GRYNTPALAANAIEHGAWAVTVGSAIT 214 (229)
T ss_dssp TT--TCCEEEE-SSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred Hc--CCCEEEE-CCCCCHHHHHHHHHcCCCEEEEchHhc
Confidence 65 6888753 35666666665543 33444554443
No 127
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=56.60 E-value=1.7e+02 Score=29.44 Aligned_cols=130 Identities=10% Similarity=0.116 Sum_probs=78.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++.+.+.|++.|+++. ..|+. ..-..+.-.++++...+..+.. .-+|+.++ +
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~G----tTGE~---~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~--------~-- 87 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAG----TTAES---PTLTHDEELELFAAVQKVVNGRVPLIAGVGTN--------D-- 87 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESS----TTTTG---GGSCHHHHHHHHHHHHHHSCSSSCEEEECCCS--------S--
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----cccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc--------C--
Confidence 4778999999999999999999774 11221 1122333566787777654433 33343321 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCC-cEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGA-DLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKT 211 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGA-dFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv 211 (566)
.++-++..+.=.++|| |.+ +.-++| +.+.+.+|.+.+.++ .++||+.==.|- .+|+
T Consensus 88 -------t~~ai~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn~P~-----------~tg~ 148 (311)
T 3h5d_A 88 -------TRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA-SDLPIIIYNIPG-----------RVVV 148 (311)
T ss_dssp -------HHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS-CSSCEEEEECHH-----------HHSS
T ss_pred -------HHHHHHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEeccc-----------ccCC
Confidence 1233444444445687 853 444555 557778888877765 378987544442 2477
Q ss_pred CCCHHHHHHhCCC
Q 008423 212 KIPAEITAALEPI 224 (566)
Q Consensus 212 ~VP~~il~~Le~~ 224 (566)
.++.+.+.+|...
T Consensus 149 ~l~~~~~~~La~~ 161 (311)
T 3h5d_A 149 ELTPETMLRLADH 161 (311)
T ss_dssp CCCHHHHHHHHTS
T ss_pred CCCHHHHHHHhcC
Confidence 8888877777543
No 128
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=56.39 E-value=1.1e+02 Score=29.95 Aligned_cols=137 Identities=9% Similarity=0.053 Sum_probs=79.6
Q ss_pred cCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe--cCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE
Q 008423 46 ICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL--RGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA 123 (566)
Q Consensus 46 ~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL--rGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA 123 (566)
.....++... --.+.+........++++|...++.| .+|.|. .+....++++.+++..++.+.++..
T Consensus 64 ~~~~~~pn~~-~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~----------~~~e~~~~~~~a~~~~~~g~~vi~~ 132 (264)
T 1xm3_A 64 SKYTLLPNTA-GASTAEEAVRIARLAKASGLCDMIKVEVIGCSRS----------LLPDPVETLKASEQLLEEGFIVLPY 132 (264)
T ss_dssp GGSEEEEECT-TCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTT----------CCBCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCeEcCCcc-ccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCcc----------cccchHHHHHHHHHHHCCCeEEEEE
Confidence 3444445443 22466655566677788777666543 344332 1334678888888765545777755
Q ss_pred ecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc--------CCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 124 GYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL--------FYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 124 gyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl--------ffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
..|. .+++++=.++|+||++.+. +-+.+ .++.+++. .++||+.|- .
T Consensus 133 ~~~~--------------------~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~----~l~~i~~~-~~iPviv~g-G 186 (264)
T 1xm3_A 133 TSDD--------------------VVLARKLEELGVHAIMPGASPIGSGQGILNPL----NLSFIIEQ-AKVPVIVDA-G 186 (264)
T ss_dssp ECSC--------------------HHHHHHHHHHTCSCBEECSSSTTCCCCCSCHH----HHHHHHHH-CSSCBEEES-C
T ss_pred cCCC--------------------HHHHHHHHHhCCCEEEECCcccCCCCCCCCHH----HHHHHHhc-CCCCEEEEe-C
Confidence 5442 1234444568999986632 12323 44555553 378987753 6
Q ss_pred cCCHHHHHHHhc--cCCCCCCHHHHH
Q 008423 196 INNYKGFLRMTG--FCKTKIPAEITA 219 (566)
Q Consensus 196 I~s~~~~~r~~~--l~Gv~VP~~il~ 219 (566)
|.+...+..+.+ --|+-|-..+.+
T Consensus 187 I~t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 187 IGSPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp CCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CCCHHHHHHHHHcCCCEEEEcHHHhC
Confidence 777777776544 356677777654
No 129
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=56.24 E-value=61 Score=33.72 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=20.1
Q ss_pred HHHHcCCCeEEEEcCCchHHHHHHHHHcC
Q 008423 245 KILAHGIKTLHLYTLNMEKSALAILLNLG 273 (566)
Q Consensus 245 ~L~~~Gv~GiHfyTlN~e~~v~~IL~~l~ 273 (566)
++...|+.|.-=|.-..++.+..++..|+
T Consensus 290 ~~~~eg~~~~v~~~g~~~~~~~~~~~glr 318 (366)
T 4fo4_A 290 KLVPEGIEGRIAYKGHLKEIIHQQMGGLR 318 (366)
T ss_dssp -CCCSBCEEEEECCBCHHHHHHHHHHHHH
T ss_pred cccCCCcEEecCCCCCHHHHHHHHHHHHH
Confidence 34445777777777778888888777663
No 130
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=55.75 E-value=89 Score=30.11 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=76.4
Q ss_pred HHHHHHHHHhhcCCceeEEecccc-----C--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTN-----M--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV 107 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd-----~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV 107 (566)
+.+....+++..+++++- +..++ . ++ -.+.+..+.++|++-|++....-.+. ..-.+++
T Consensus 57 ~~~~i~~ir~~v~~Pvig-~~k~d~~~~~~~I~~--~~~~i~~~~~~Gad~V~l~~~~~~~p-----------~~l~~~i 122 (232)
T 3igs_A 57 GIDNLRMTRSLVSVPIIG-IIKRDLDESPVRITP--FLDDVDALAQAGAAIIAVDGTARQRP-----------VAVEALL 122 (232)
T ss_dssp SHHHHHHHHTTCCSCEEE-ECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEECCSSCCS-----------SCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEE-EEeecCCCcceEeCc--cHHHHHHHHHcCCCEEEECccccCCH-----------HHHHHHH
Confidence 355566777666777642 22222 1 11 11234567789999887665432111 1367788
Q ss_pred HHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC-CCH-----HHHHHHHHHHH
Q 008423 108 KHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF-YDT-----DMFLKFVNDCR 181 (566)
Q Consensus 108 k~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf-fD~-----d~f~~f~~~~R 181 (566)
+.+++ .| ..+++- -|. .+.+++=.++|||+|.+.++ |.. ..-.+.+++++
T Consensus 123 ~~~~~-~g--~~v~~~----v~t-----------------~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~ 178 (232)
T 3igs_A 123 ARIHH-HH--LLTMAD----CSS-----------------VDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALH 178 (232)
T ss_dssp HHHHH-TT--CEEEEE----CCS-----------------HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHH
T ss_pred HHHHH-CC--CEEEEe----CCC-----------------HHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHH
Confidence 88875 34 334332 231 22334455799999976433 210 01124455666
Q ss_pred HcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHHHH
Q 008423 182 QIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAEIT 218 (566)
Q Consensus 182 ~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~il 218 (566)
+. ++|||+. =.|.|...+.++.+ ..|+-|=..+.
T Consensus 179 ~~--~ipvIA~-GGI~t~~d~~~~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 179 DA--GCRVIAE-GRYNSPALAAEAIRYGAWAVTVGSAIT 214 (232)
T ss_dssp HT--TCCEEEE-SCCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred hc--CCcEEEE-CCCCCHHHHHHHHHcCCCEEEEehHhc
Confidence 65 6888743 35666766665544 34455655554
No 131
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=55.70 E-value=53 Score=30.49 Aligned_cols=167 Identities=10% Similarity=0.045 Sum_probs=93.5
Q ss_pred hhhccCCCcCEEEecCCCCC--CCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 008423 10 WTAWWPTTRHSATSRWGAGG--STADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87 (566)
Q Consensus 10 ~~~~~~~~p~fVsVTwgagG--~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp 87 (566)
...+.+...+++.+-.-.|. ..-...+++++.+++.++++...|+-..|... .++.+.++|++-|.+-.+..
T Consensus 22 ~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~-----~i~~~~~~gad~v~vh~~~~- 95 (220)
T 2fli_A 22 LARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPER-----YVEAFAQAGADIMTIHTEST- 95 (220)
T ss_dssp HHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGG-----GHHHHHHHTCSEEEEEGGGC-
T ss_pred HHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHH-----HHHHHHHcCCCEEEEccCcc-
Confidence 34444555666443332222 11122378888888877889999998876532 34667788998776433221
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE---Ee
Q 008423 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI---IT 164 (566)
Q Consensus 88 ~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi---IT 164 (566)
+....+++.+++ +| ..+|++..|... . +.+ +.+..++|++ -+
T Consensus 96 -------------~~~~~~~~~~~~-~g--~~i~~~~~~~t~------~---------e~~----~~~~~~~d~vl~~~~ 140 (220)
T 2fli_A 96 -------------RHIHGALQKIKA-AG--MKAGVVINPGTP------A---------TAL----EPLLDLVDQVLIMTV 140 (220)
T ss_dssp -------------SCHHHHHHHHHH-TT--SEEEEEECTTSC------G---------GGG----GGGTTTCSEEEEESS
T ss_pred -------------ccHHHHHHHHHH-cC--CcEEEEEcCCCC------H---------HHH----HHHHhhCCEEEEEEE
Confidence 124456677765 45 568999866311 0 111 2334678987 23
Q ss_pred ccCCC-----HH---HHHHHHHHHHHcCCCCcE--EeeecccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 165 QLFYD-----TD---MFLKFVNDCRQIGITCPI--VPGIMPINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 165 QlffD-----~d---~f~~f~~~~R~~Gi~vPI--IpGImPI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
.+.|+ .. .+.+..+.+.+.+.++|| ..||- ..+.+.+.. +...|+.|-..+.+
T Consensus 141 ~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~-~Gad~vvvGsai~~ 203 (220)
T 2fli_A 141 NPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYE-AGANVFVAGSYLFK 203 (220)
T ss_dssp CTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHH-HTCCEEEESHHHHT
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHH-cCCCEEEEChHHhC
Confidence 33443 32 222233333334446774 67888 466666543 35667777777754
No 132
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=54.74 E-value=62 Score=33.63 Aligned_cols=56 Identities=18% Similarity=0.202 Sum_probs=36.7
Q ss_pred HHHHHHHHHcCCcEEEeccC-CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHH
Q 008423 148 LLYLKKKVDAGADLIITQLF-YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 148 l~~Lk~KvdAGAdFiITQlf-fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~ 205 (566)
.++++.=+++|+|+|+-... -+.+.+.+.++.+++...++||++|- +.+...++++
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~--v~t~e~A~~a 166 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN--VATAEGARAL 166 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE--ECSHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee--eCCHHHHHHH
Confidence 45566667899998862211 13456677888888875568888872 4566665554
No 133
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=54.58 E-value=1.1e+02 Score=31.19 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=80.1
Q ss_pred cCCCCCCCch---hHHHHHHHHHhhcC--CceeEEeccc-----cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCc
Q 008423 24 RWGAGGSTAD---LTLDIANRMQNTIC--VETMMHLTCT-----NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKF 93 (566)
Q Consensus 24 TwgagG~~~~---~Sl~la~~lq~~~G--le~i~HLTCr-----d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~ 93 (566)
|+.-||+... ..++++..+++..| +++..-+++. +.+.++....+..+.++|+.-|-+..|.......
T Consensus 191 ~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~-- 268 (349)
T 3hgj_A 191 TDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVR-- 268 (349)
T ss_dssp CSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSC--
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccc--
Confidence 4445665332 35788889998885 5677788875 3567777778888899999988776554321100
Q ss_pred cccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcC-CcEE--EeccCCCH
Q 008423 94 VQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAG-ADLI--ITQLFYDT 170 (566)
Q Consensus 94 ~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAG-AdFi--ITQlffD~ 170 (566)
.+.... +..++++.||+..+- --|++.+.- + .+...+-+++| ||+| -+.++-|+
T Consensus 269 ~~~~~~--~~~~~~~~ir~~~~i-PVi~~Ggi~-------t-------------~e~a~~~l~~G~aD~V~iGR~~lanP 325 (349)
T 3hgj_A 269 IPLAPG--FQVPFADAVRKRVGL-RTGAVGLIT-------T-------------PEQAETLLQAGSADLVLLGRVLLRDP 325 (349)
T ss_dssp CCCCTT--TTHHHHHHHHHHHCC-EEEECSSCC-------C-------------HHHHHHHHHTTSCSEEEESTHHHHCT
T ss_pred cCCCcc--ccHHHHHHHHHHcCc-eEEEECCCC-------C-------------HHHHHHHHHCCCceEEEecHHHHhCc
Confidence 000111 356778888886642 122222210 1 23345566788 8974 46777788
Q ss_pred HHHHHHHHHH
Q 008423 171 DMFLKFVNDC 180 (566)
Q Consensus 171 d~f~~f~~~~ 180 (566)
+-+.++.+.+
T Consensus 326 dl~~k~~~~l 335 (349)
T 3hgj_A 326 YFPLRAAKAL 335 (349)
T ss_dssp THHHHHHHHT
T ss_pred hHHHHHHHHC
Confidence 8777766544
No 134
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=53.96 E-value=1e+02 Score=30.47 Aligned_cols=132 Identities=11% Similarity=0.064 Sum_probs=78.0
Q ss_pred cccchhhccCCCcCEEEecCCCC--------CCCchh----HHHHHHHHHhhcCCceeEEeccc-------cCCHHHHHH
Q 008423 6 CSSGWTAWWPTTRHSATSRWGAG--------GSTADL----TLDIANRMQNTICVETMMHLTCT-------NMPVEKIDH 66 (566)
Q Consensus 6 ~~~~~~~~~~~~p~fVsVTwgag--------G~~~~~----Sl~la~~lq~~~Gle~i~HLTCr-------d~n~~~L~~ 66 (566)
..++..+.+....+.|.|-.... +.+... +.++++.+++ .|+++...+.|. ..+.+.+.+
T Consensus 81 n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~~~~~~~~~ 159 (295)
T 1ydn_A 81 NMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN-DGLAIRGYVSCVVECPYDGPVTPQAVAS 159 (295)
T ss_dssp SHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECSSEETTTEECCHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH-cCCeEEEEEEEEecCCcCCCCCHHHHHH
Confidence 34556666666667776644222 223333 3444566664 799887777765 347888888
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHH
Q 008423 67 ALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQS 146 (566)
Q Consensus 67 ~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~ 146 (566)
.++.+.+.|++.|-+- |.... ..-....+||+.|++..+. ..|++-++-.. . .
T Consensus 160 ~~~~~~~~G~d~i~l~--Dt~G~--------~~P~~~~~lv~~l~~~~~~-~~l~~H~Hn~~-----G-----------l 212 (295)
T 1ydn_A 160 VTEQLFSLGCHEVSLG--DTIGR--------GTPDTVAAMLDAVLAIAPA-HSLAGHYHDTG-----G-----------R 212 (295)
T ss_dssp HHHHHHHHTCSEEEEE--ETTSC--------CCHHHHHHHHHHHHTTSCG-GGEEEEEBCTT-----S-----------C
T ss_pred HHHHHHhcCCCEEEec--CCCCC--------cCHHHHHHHHHHHHHhCCC-CeEEEEECCCc-----c-----------h
Confidence 8888889999865433 43211 1112367888888876652 34555553311 1 1
Q ss_pred HHHHHHHHHHcCCcEEEec
Q 008423 147 DLLYLKKKVDAGADLIITQ 165 (566)
Q Consensus 147 dl~~Lk~KvdAGAdFiITQ 165 (566)
-.....+=+++||+.|-+=
T Consensus 213 a~an~l~Ai~aG~~~vd~s 231 (295)
T 1ydn_A 213 ALDNIRVSLEKGLRVFDAS 231 (295)
T ss_dssp HHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHHHHhCCCEEEec
Confidence 2444555578899877653
No 135
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=53.95 E-value=1.7e+02 Score=28.86 Aligned_cols=111 Identities=10% Similarity=0.076 Sum_probs=68.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~ 135 (566)
..+.+.+++.++...+.|++.|+++. - .|+. ..-..+.-.++++.+.+..+.. .-+|+.++-
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~G-t---tGE~---~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~--------- 80 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPCG-T---TGES---PTLSKSEHEQVVEITIKTANGRVPVIAGAGSNS--------- 80 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETTS-G---GGTG---GGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS---------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECc-c---ccCh---hhCCHHHHHHHHHHHHHHhCCCCcEEEecCCcc---------
Confidence 35889999999999999999988553 1 1111 1122223566777766543322 344544311
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcE-EEeccCC---CHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADL-IITQLFY---DTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdF-iITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
.++-++..+.=.++|||. .+.-++| +.+.+.++.+.+.++ .++||+.==
T Consensus 81 --------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a-~~lPiilYn 133 (292)
T 2vc6_A 81 --------TAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAA-STIPIIVYN 133 (292)
T ss_dssp --------HHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred --------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEe
Confidence 124455555556689995 4556666 778888888777664 368987533
No 136
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=53.59 E-value=95 Score=28.55 Aligned_cols=46 Identities=17% Similarity=0.252 Sum_probs=32.8
Q ss_pred HHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCC
Q 008423 151 LKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINN 198 (566)
Q Consensus 151 Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s 198 (566)
.++=.++|||+++.-..-..+.+.++++.+++.| +++++.+..+.+
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~t 115 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMICVDD 115 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECTTCSS
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEecCCCC
Confidence 4445679999998865555577788999999988 456666554444
No 137
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=53.47 E-value=58 Score=31.78 Aligned_cols=146 Identities=15% Similarity=0.084 Sum_probs=75.8
Q ss_pred hhccC-CCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEecc-------------ccCC-HHHHHHHHHHHHHcC
Q 008423 11 TAWWP-TTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTC-------------TNMP-VEKIDHALQTIKSNG 75 (566)
Q Consensus 11 ~~~~~-~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTC-------------rd~n-~~~L~~~L~~a~~~G 75 (566)
+++.. ..++.|--+ . .+..+..++..+++ .+++.+...+. ...+ ..........+.+.|
T Consensus 65 ~~li~~~~v~~iiG~---~--~s~~~~~~~~~~~~-~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 138 (368)
T 4eyg_A 65 QELIVNDKVNVIAGF---G--ITPAALAAAPLATQ-AKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKNG 138 (368)
T ss_dssp HHHHHTSCCSEEEEC---S--SHHHHHHHHHHHHH-HTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCcEEEECC---C--ccHHHHHHHHHHHh-CCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHcC
Confidence 44543 566666322 2 23345555666654 67776643211 1112 234444555567789
Q ss_pred CCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHH
Q 008423 76 IQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKV 155 (566)
Q Consensus 76 IrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv 155 (566)
.++|.+|..|... +-..+..+.+.++ ++|.. -++...|+.+.. +. ...+.+|++
T Consensus 139 ~~~ia~i~~~~~~----------g~~~~~~~~~~l~-~~g~~-v~~~~~~~~~~~---d~---------~~~~~~l~~-- 192 (368)
T 4eyg_A 139 IKKVATLTSDYAP----------GNDALAFFKERFT-AGGGE-IVEEIKVPLANP---DF---------APFLQRMKD-- 192 (368)
T ss_dssp CCEEEEEEESSHH----------HHHHHHHHHHHHH-HTTCE-EEEEEEECSSSC---CC---------HHHHHHHHH--
T ss_pred CCEEEEEecCchH----------hHHHHHHHHHHHH-HcCCE-EEEEEeCCCCCC---cH---------HHHHHHHHh--
Confidence 9999999633210 0001222333343 34522 123445554432 22 244555554
Q ss_pred HcCCcEEEeccCCCHHHHHHHHHHHHHcCCC---CcEEe
Q 008423 156 DAGADLIITQLFYDTDMFLKFVNDCRQIGIT---CPIVP 191 (566)
Q Consensus 156 dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~---vPIIp 191 (566)
+++|.|+.-. .+. ....+++.+++.|++ +|++.
T Consensus 193 -~~~d~v~~~~-~~~-~a~~~~~~~~~~g~~~~~v~~~~ 228 (368)
T 4eyg_A 193 -AKPDAMFVFV-PAG-QGGNFMKQFAERGLDKSGIKVIG 228 (368)
T ss_dssp -HCCSEEEEEC-CTT-CHHHHHHHHHHTTGGGTTCEEEE
T ss_pred -cCCCEEEEec-cch-HHHHHHHHHHHcCCCcCCceEEe
Confidence 5899888632 222 566789999999987 67654
No 138
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=52.20 E-value=1.1e+02 Score=31.14 Aligned_cols=131 Identities=12% Similarity=0.108 Sum_probs=82.2
Q ss_pred cCCCCCCCch---hHHHHHHHHHhhcCCceeEEecccc-----CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc
Q 008423 24 RWGAGGSTAD---LTLDIANRMQNTICVETMMHLTCTN-----MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ 95 (566)
Q Consensus 24 TwgagG~~~~---~Sl~la~~lq~~~Gle~i~HLTCrd-----~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~ 95 (566)
|+.-||+... ..++++..+++...+++..-|+..+ .+.+.....+..+.++|+.-|-+..|....... .
T Consensus 183 ~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~---~ 259 (340)
T 3gr7_A 183 QDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARM---N 259 (340)
T ss_dssp CSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCC---C
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCC---C
Confidence 4444666332 2578888888888899999999864 356677778888889999988877664321100 0
Q ss_pred cCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcC-CcEE--EeccCCCHHH
Q 008423 96 IQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAG-ADLI--ITQLFYDTDM 172 (566)
Q Consensus 96 ~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAG-AdFi--ITQlffD~d~ 172 (566)
.... +..++++.||+..+- --|++.++- + .+..++-+++| ||+| =+.++-|++-
T Consensus 260 ~~~~--~~~~~~~~ik~~~~i-PVi~~GgI~-------s-------------~e~a~~~L~~G~aD~V~iGR~~lanPdl 316 (340)
T 3gr7_A 260 VYPG--YQVPFAELIRREADI-PTGAVGLIT-------S-------------GWQAEEILQNGRADLVFLGRELLRNPYW 316 (340)
T ss_dssp CCTT--TTHHHHHHHHHHTTC-CEEEESSCC-------C-------------HHHHHHHHHTTSCSEEEECHHHHHCTTH
T ss_pred CCcc--ccHHHHHHHHHHcCC-cEEeeCCCC-------C-------------HHHHHHHHHCCCeeEEEecHHHHhCchH
Confidence 0111 246778888887642 133333221 1 23345566788 9974 4677778888
Q ss_pred HHHHHHHH
Q 008423 173 FLKFVNDC 180 (566)
Q Consensus 173 f~~f~~~~ 180 (566)
+.++.+.+
T Consensus 317 ~~ki~~~l 324 (340)
T 3gr7_A 317 PYAAAREL 324 (340)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
Confidence 77766543
No 139
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=52.08 E-value=27 Score=37.51 Aligned_cols=149 Identities=12% Similarity=0.108 Sum_probs=87.5
Q ss_pred hhccCCCcCEEE----ecCCCCCCCch---hHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEec
Q 008423 11 TAWWPTTRHSAT----SRWGAGGSTAD---LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR 83 (566)
Q Consensus 11 ~~~~~~~p~fVs----VTwgagG~~~~---~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLr 83 (566)
.++|.+..|||- ++..+-...++ ...+...+++++.|-..+--+.++.- .+++.+..+.++++|..-+| +-
T Consensus 178 ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~-~~eM~~Ra~~a~e~G~~~~m-vd 255 (444)
T 3kdn_A 178 YDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITAD-LLEMEQRLEVLADLGLKHAM-VD 255 (444)
T ss_dssp HHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSS-HHHHHHHHHHHHHHTCCEEE-EE
T ss_pred HHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecCCC-HHHHHHHHHHHHHcCCCEEE-Ec
Confidence 356777788872 22222222222 35566777788899777666667665 77787888888999976555 31
Q ss_pred CCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE
Q 008423 84 GDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII 163 (566)
Q Consensus 84 GDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI 163 (566)
+ +......++.+++.+.+ ..+-+-++|.+|.-..... .-.-+. .-+.+|-+= +|||.+.
T Consensus 256 ~---------------~~~G~~a~~~l~~~~~~-~~l~lh~HrA~~ga~~r~~--~hGi~~-~vl~Kl~RL--aG~D~ih 314 (444)
T 3kdn_A 256 V---------------VITGWGALRYIRDLAAD-YGLAIHGHRAMHAAFTRNP--YHGISM-FVLAKLYRL--IGIDQLH 314 (444)
T ss_dssp H---------------HHHCHHHHHHHHHHHHH-HTCEEEEECTTTHHHHSCT--TSEECH-HHHHHHHHH--HTCSEEE
T ss_pred c---------------ccccHHHHHHHHHhccc-cCeEEEEccCcccccccCC--CCCcCH-HHHHHHHHH--cCCCeee
Confidence 1 11123344555553221 2344557788883210000 000111 124444443 6999999
Q ss_pred eccC------CCHHHHHHHHHHHHH
Q 008423 164 TQLF------YDTDMFLKFVNDCRQ 182 (566)
Q Consensus 164 TQlf------fD~d~f~~f~~~~R~ 182 (566)
+--+ ++.+....+.+.||+
T Consensus 315 ~gt~g~GKleg~~~~~~~~~~~lr~ 339 (444)
T 3kdn_A 315 VGTAGAGKLEGERDITIQNARILRE 339 (444)
T ss_dssp CCCTTSSSBCCCHHHHHHHHHHHHC
T ss_pred ccccccCCcCCCHHHHHHHHHHHHh
Confidence 9766 799999999999986
No 140
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=50.43 E-value=2.1e+02 Score=28.74 Aligned_cols=168 Identities=10% Similarity=-0.010 Sum_probs=100.8
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRS 112 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~ 112 (566)
+.-+..++.+.+...++++.=+-.---+.+...+...++.++|+.-|-+=-|..|+.-.+-...--......+-|+.+++
T Consensus 68 ~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~ 147 (287)
T 3b8i_A 68 SEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALE 147 (287)
T ss_dssp HHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHH
Confidence 44556666666666676666555431277888888888888999999877776654311111001112235556666655
Q ss_pred Hc-CCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEe
Q 008423 113 AY-GDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVP 191 (566)
Q Consensus 113 ~~-gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIp 191 (566)
.- +..|.|-+=.-- .. ...++-+++.+.=.+||||.|+--.+=+.+.+.++.+. +++|++.
T Consensus 148 a~~~~~~~i~aRtda-a~------------~gl~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~-----~~~P~ii 209 (287)
T 3b8i_A 148 ARVDPALTIIARTNA-EL------------IDVDAVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEH-----LHIPLML 209 (287)
T ss_dssp HCCSTTSEEEEEEET-TT------------SCHHHHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTT-----CCSCEEE
T ss_pred cCCCCCcEEEEechh-hh------------cCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHh-----CCCCEEE
Confidence 42 223444332211 11 12347799999999999998887777788888777654 3588773
Q ss_pred ---eecccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 192 ---GIMPINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 192 ---GImPI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
|-.|..+.+.+.. .-+.-+..|..++.
T Consensus 210 ~~~g~~~~~~~~eL~~-lGv~~v~~~~~~~r 239 (287)
T 3b8i_A 210 VTYGNPQLRDDARLAR-LGVRVVVNGHAAYF 239 (287)
T ss_dssp ECTTCGGGCCHHHHHH-TTEEEEECCCHHHH
T ss_pred eCCCCCCCCCHHHHHH-cCCcEEEEChHHHH
Confidence 3446667766654 22333556666543
No 141
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=50.38 E-value=2.1e+02 Score=28.72 Aligned_cols=124 Identities=12% Similarity=0.159 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+.+.++...+.|++.|+++. - .|+. ..-..+.-.++++.+.+..+.. .-+|+.+ .
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~G-t---TGE~---~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--s--------- 91 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNG-N---TGEF---YALTIEEAKQVATRVTELVNGRATVVAGIGY--S--------- 91 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTS-G---GGTG---GGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--S---------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECc-c---cCCh---hhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--C---------
Confidence 5889999999999999999988553 1 1111 1122233566777766654333 3334432 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEE-EeccCC---CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCC
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLI-ITQLFY---DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK 212 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff---D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~ 212 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-++ .++||+.== ..|+
T Consensus 92 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiilYn--------------~tg~- 148 (314)
T 3d0c_A 92 -------VDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEA-LDAPSIIYF--------------KDAH- 148 (314)
T ss_dssp -------HHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHH-SSSCEEEEE--------------CCTT-
T ss_pred -------HHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEe--------------CCCC-
Confidence 1133555555557899964 455666 667777777776654 357876421 4667
Q ss_pred CCHHHHHHhCC
Q 008423 213 IPAEITAALEP 223 (566)
Q Consensus 213 VP~~il~~Le~ 223 (566)
++.+.+.+|..
T Consensus 149 l~~~~~~~La~ 159 (314)
T 3d0c_A 149 LSDDVIKELAP 159 (314)
T ss_dssp SCTHHHHHHTT
T ss_pred cCHHHHHHHHc
Confidence 77777776653
No 142
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=49.53 E-value=1.6e+02 Score=28.85 Aligned_cols=151 Identities=13% Similarity=0.093 Sum_probs=87.2
Q ss_pred hhccCCCcC--EEEecCCCCCCCchhHHHHHHHHHhhc-CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 008423 11 TAWWPTTRH--SATSRWGAGGSTADLTLDIANRMQNTI-CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87 (566)
Q Consensus 11 ~~~~~~~p~--fVsVTwgagG~~~~~Sl~la~~lq~~~-Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp 87 (566)
+++.+...+ .++|-+|..-..-.--..+++.+++.. .++...||-+.+- +..+..+.++|..-|-+- ....
T Consensus 47 ~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p-----~~~i~~~~~aGAd~itvH-~Ea~ 120 (246)
T 3inp_A 47 KAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPV-----DALIESFAKAGATSIVFH-PEAS 120 (246)
T ss_dssp HHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSC-----HHHHHHHHHHTCSEEEEC-GGGC
T ss_pred HHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCH-----HHHHHHHHHcCCCEEEEc-cccc
Confidence 334334444 566666543221122345677777766 7889999997665 345677788999877754 1111
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE--e-
Q 008423 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII--T- 164 (566)
Q Consensus 88 ~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--T- 164 (566)
.+...+++.||+ +| ..+|++.+|.-.. +.++.+. .+.|++. |
T Consensus 121 -------------~~~~~~i~~ir~-~G--~k~Gvalnp~Tp~---------------e~l~~~l----~~vD~VlvMsV 165 (246)
T 3inp_A 121 -------------EHIDRSLQLIKS-FG--IQAGLALNPATGI---------------DCLKYVE----SNIDRVLIMSV 165 (246)
T ss_dssp -------------SCHHHHHHHHHT-TT--SEEEEEECTTCCS---------------GGGTTTG----GGCSEEEEECS
T ss_pred -------------hhHHHHHHHHHH-cC--CeEEEEecCCCCH---------------HHHHHHH----hcCCEEEEeee
Confidence 246677888874 56 5899999996422 1122222 2467653 3
Q ss_pred ------ccCC--CHHHHHHHHHHHHHcCCCCcE--EeeecccCCHHHHH
Q 008423 165 ------QLFY--DTDMFLKFVNDCRQIGITCPI--VPGIMPINNYKGFL 203 (566)
Q Consensus 165 ------Qlff--D~d~f~~f~~~~R~~Gi~vPI--IpGImPI~s~~~~~ 203 (566)
|-|- ..+.+.++.+.+.+.|.+++| -.||-+ .+.+.+.
T Consensus 166 ~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~-~ti~~~~ 213 (246)
T 3inp_A 166 NPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNP-YNIAEIA 213 (246)
T ss_dssp CTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCT-TTHHHHH
T ss_pred cCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCH-HHHHHHH
Confidence 3322 134445555555556766655 678764 5555443
No 143
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=49.07 E-value=59 Score=33.30 Aligned_cols=145 Identities=13% Similarity=0.101 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+.+.+...++.+.|.+.|=+=-|.+ ......+.|+.+|+..|+.+.+.+=++ .+ .+.
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~------------~~~~~~e~v~avr~a~g~~~~l~vDan-~~----~~~--- 203 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGS------------DPAQDIARIEAISAGLPDGHRVTFDVN-RA----WTP--- 203 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------CHHHHHHHHHHHHHSCCTTCEEEEECT-TC----CCH---
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCC------------ChHHHHHHHHHHHHHhCCCCEEEEeCC-CC----CCH---
Confidence 4677777888888889988876533332 234578899999998887777777654 11 122
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCHH
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPAE 216 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~~ 216 (566)
.+..++.++++.|. .|-|++-|.+.+ .++++. ..+||..+=. +.+...+.++.+ .+.+-.++-
T Consensus 204 -------~~a~~~~~~l~~~i--~iEqP~~d~~~~----~~l~~~-~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik~ 268 (378)
T 2qdd_A 204 -------AIAVEVLNSVRARD--WIEQPCQTLDQC----AHVARR-VANPIMLDEC-LHEFSDHLAAWSRGACEGVKIKP 268 (378)
T ss_dssp -------HHHHHHHTSCCCCC--EEECCSSSHHHH----HHHHTT-CCSCEEECTT-CCSHHHHHHHHHHTCCSEEEECH
T ss_pred -------HHHHHHHHHhCCCc--EEEcCCCCHHHH----HHHHHh-CCCCEEECCC-cCCHHHHHHHHHhCCCCEEEecc
Confidence 34444445554566 789998754443 344443 4689887754 567777766543 232222211
Q ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 217 ITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 217 il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
.+-=|+.-+.++++...+.|++
T Consensus 269 --------------~~~GGi~~~~~i~~~A~~~g~~ 290 (378)
T 2qdd_A 269 --------------NRVGGLTRARQIRDFGVSVGWQ 290 (378)
T ss_dssp --------------HHHTSHHHHHHHHHHHHHHTCE
T ss_pred --------------cccCCHHHHHHHHHHHHHcCCe
Confidence 1222566677777777777643
No 144
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=48.94 E-value=1.1e+02 Score=28.23 Aligned_cols=65 Identities=25% Similarity=0.339 Sum_probs=36.1
Q ss_pred HHHHHcCCcEEEeccCCCHH--------HHHHHHHHHHHcCCC-CcEE--eeecccCCHHHHHHHhccCCCCCCHHHHH
Q 008423 152 KKKVDAGADLIITQLFYDTD--------MFLKFVNDCRQIGIT-CPIV--PGIMPINNYKGFLRMTGFCKTKIPAEITA 219 (566)
Q Consensus 152 k~KvdAGAdFiITQlffD~d--------~f~~f~~~~R~~Gi~-vPII--pGImPI~s~~~~~r~~~l~Gv~VP~~il~ 219 (566)
++-.++|||+++--++|+.. .-.+.++++++. .. +||+ -||- ..+...+.. +...|+.+-..+.+
T Consensus 130 ~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~-~~~~pvia~GGI~-~~nv~~~~~-~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 130 KQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ-GISIPIVGIGGIT-IDNAAPVIQ-AGADGVSMISAISQ 205 (227)
T ss_dssp HHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHT-TCCCCEEEESSCC-TTTSHHHHH-TTCSEEEESHHHHT
T ss_pred HHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHh-CCCCCEEEEcCCC-HHHHHHHHH-cCCCEEEEhHHhhc
Confidence 33446899999844444310 012233444432 23 7875 4676 666666543 45667778877754
No 145
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=48.80 E-value=2.2e+02 Score=28.52 Aligned_cols=129 Identities=12% Similarity=0.068 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCC-ceeEEEEecCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGD-YFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd-~F~IGVAgyPEgHpe~~~~~~ 137 (566)
.+.+.+.+.++.+.+.|++.|+++.. .|+. ..-..+.=.++++...+..|. ..-+|+.++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----TGE~---~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~------------ 86 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGI----LGEA---PKLDAAEAEAVATRFIKRAKSMQVIVGVSAP------------ 86 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTG----GGTG---GGSCHHHHHHHHHHHHHHCTTSEEEEECCCS------------
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCcc----CcCh---hhCCHHHHHHHHHHHHHHcCCCcEEEecCCC------------
Confidence 48899999999999999999987741 1211 111222345677776665532 122333221
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEEEe-ccCC--CHHHHHHHHHHHHHc-CCCCcEEeeecccCCHHHHHHHhccCCCCC
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLIIT-QLFY--DTDMFLKFVNDCRQI-GITCPIVPGIMPINNYKGFLRMTGFCKTKI 213 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFiIT-Qlff--D~d~f~~f~~~~R~~-Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~V 213 (566)
+.++-++..+.=.++|||.++. -++| +.+.+.+|.+.+-++ +-++||+.==.|- ..|+.+
T Consensus 87 -----~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~-----------~tg~~l 150 (313)
T 3dz1_A 87 -----GFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPL-----------TLSVVM 150 (313)
T ss_dssp -----SHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHH-----------HHCCCC
T ss_pred -----CHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCcc-----------ccCcCC
Confidence 1224455455555679996544 3444 667777777776654 2238887543332 146667
Q ss_pred CHHHHHHhC
Q 008423 214 PAEITAALE 222 (566)
Q Consensus 214 P~~il~~Le 222 (566)
+.+++.+|.
T Consensus 151 ~~~~~~~La 159 (313)
T 3dz1_A 151 TPKVIRQIV 159 (313)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 766666663
No 146
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=48.79 E-value=1.2e+02 Score=31.92 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=91.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCC--CCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPH--GQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~--~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+++.+..+++.+.|.+.|=+=-|.+.. .+.. +.....+..++.|+.||+..|+.+.|.+=++- ..+.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~--~~~~~~~~d~e~v~avR~avG~d~~L~vDan~-----~~t~- 216 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHM--PAMTDISLSVEFCRKIRAAVGDKADLLFGTHG-----QFTT- 216 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBC--CCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS-----CBCH-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCC--cchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC-----CCCH-
Confidence 477888888888899999988763343311 0100 00012445778899999999988888874431 1121
Q ss_pred CCCCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCC
Q 008423 137 GVASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKT 211 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv 211 (566)
.+..++.++++ .|.+| |=|++- |.+.+ .+++++ ..+||..|=. +.+...+.++.+ .+.+
T Consensus 217 ---------~~A~~~~~~Le~~~i~~-iEeP~~~~~~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~l~~g~~D~ 280 (433)
T 3rcy_A 217 ---------AGAIRLGQAIEPYSPLW-YEEPVPPDNVGAM----AQVARA-VRIPVATGER-LTTKAEFAPVLREGAAAI 280 (433)
T ss_dssp ---------HHHHHHHHHHGGGCCSE-EECCSCTTCHHHH----HHHHHH-SSSCEEECTT-CCSHHHHHHHHHTTCCSE
T ss_pred ---------HHHHHHHHHhhhcCCCE-EECCCChhhHHHH----HHHHhc-cCCCEEecCC-CCCHHHHHHHHHcCCCCE
Confidence 34445555554 45554 579986 44443 334443 4689887754 667777776553 2333
Q ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 212 KIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 212 ~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
-.|+- .+-=|+.-+.+++.-....|
T Consensus 281 v~~d~--------------~~~GGit~~~kia~lA~~~g 305 (433)
T 3rcy_A 281 LQPAL--------------GRAGGIWEMKKVAAMAEVYN 305 (433)
T ss_dssp ECCCH--------------HHHTHHHHHHHHHHHHHTTT
T ss_pred EEeCc--------------hhcCCHHHHHHHHHHHHHcC
Confidence 33311 23336777777777666665
No 147
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=48.09 E-value=1.8e+02 Score=27.32 Aligned_cols=169 Identities=10% Similarity=0.077 Sum_probs=83.4
Q ss_pred hhccCCCcCEEEecCCC---CCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 008423 11 TAWWPTTRHSATSRWGA---GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP 87 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwga---gG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp 87 (566)
.++.+...+++.|..-. .+... . ++.+.+.+..+++++.|.-.++ .+. +..+.++|+.-|.+=+...+
T Consensus 39 ~~~~~~Gad~i~v~~~d~~~~~~~~--~-~~i~~i~~~~~ipv~v~ggI~~--~~~----~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 39 LAWQRSGAEWLHLVDLDAAFGTGDN--R-ALIAEVAQAMDIKVELSGGIRD--DDT----LAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHTTCSEEEEEEHHHHHTSCCC--H-HHHHHHHHHCSSEEEEESSCCS--HHH----HHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHcCCCEEEEecCchhhcCCCh--H-HHHHHHHHhcCCcEEEECCcCC--HHH----HHHHHHcCCCEEEECchHhh
Confidence 34445566777775421 12222 2 5666666677888888866653 333 44445578887764332211
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEec---CCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE-E
Q 008423 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGY---PEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI-I 163 (566)
Q Consensus 88 ~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgy---PEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-I 163 (566)
. .+++..+.+.+|....+++-.. -+.|.-..+. . ++ ++.+++=.++|++.| +
T Consensus 110 --------------~-p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~-----~-~~---~e~~~~~~~~G~~~i~~ 165 (244)
T 1vzw_A 110 --------------T-PEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDG-----G-DL---YETLDRLNKEGCARYVV 165 (244)
T ss_dssp --------------C-HHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCC-----C-BH---HHHHHHHHHTTCCCEEE
T ss_pred --------------C-HHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCC-----C-CH---HHHHHHHHhCCCCEEEE
Confidence 1 1234444445664444554432 1223111100 0 11 233333345899954 4
Q ss_pred ec-------cCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc-----CCCCCCHHHH
Q 008423 164 TQ-------LFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF-----CKTKIPAEIT 218 (566)
Q Consensus 164 TQ-------lffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l-----~Gv~VP~~il 218 (566)
|- .-+|.+.+.+.. +. .++||++. =.|.+...+.++.+. .|+-+=..+.
T Consensus 166 ~~~~~~~~~~g~~~~~~~~i~----~~-~~ipvia~-GGI~~~~d~~~~~~~~~~Gadgv~vG~al~ 226 (244)
T 1vzw_A 166 TDIAKDGTLQGPNLELLKNVC----AA-TDRPVVAS-GGVSSLDDLRAIAGLVPAGVEGAIVGKALY 226 (244)
T ss_dssp EEC-------CCCHHHHHHHH----HT-CSSCEEEE-SCCCSHHHHHHHHTTGGGTEEEEEECHHHH
T ss_pred eccCcccccCCCCHHHHHHHH----Hh-cCCCEEEE-CCCCCHHHHHHHHhhccCCCceeeeeHHHH
Confidence 42 225666655443 32 36898762 345555555554433 3455665554
No 148
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=47.89 E-value=1.5e+02 Score=29.78 Aligned_cols=180 Identities=13% Similarity=0.101 Sum_probs=104.3
Q ss_pred ccchhhccCCCcCEEEecCCC--------CCCCchh----HHHHHHHHHhhcCCceeEEeccc-------cCCHHHHHHH
Q 008423 7 SSGWTAWWPTTRHSATSRWGA--------GGSTADL----TLDIANRMQNTICVETMMHLTCT-------NMPVEKIDHA 67 (566)
Q Consensus 7 ~~~~~~~~~~~p~fVsVTwga--------gG~~~~~----Sl~la~~lq~~~Gle~i~HLTCr-------d~n~~~L~~~ 67 (566)
..|..+.+....+.|.|-... -+.+.+. ..++++.+++ .|+++...++|. ..+.+.+.+.
T Consensus 84 ~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~-~G~~v~~~i~~~~~~~~~~~~~~~~~~~~ 162 (307)
T 1ydo_A 84 QRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQK-ANLTTRAYLSTVFGCPYEKDVPIEQVIRL 162 (307)
T ss_dssp HHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTTBCCCHHHHHHH
T ss_pred HHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCEEEEEEEEEecCCcCCCCCHHHHHHH
Confidence 344555555555555554321 1223332 3455556664 799997777663 2477899999
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHH
Q 008423 68 LQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147 (566)
Q Consensus 68 L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~d 147 (566)
++.+.++|++.|- | .|-.... .-....+||+.+++..++ ..||+-++=.. . .-
T Consensus 163 ~~~~~~~Ga~~i~-l-~DT~G~~--------~P~~v~~lv~~l~~~~~~-~~l~~H~Hnd~-------G---------la 215 (307)
T 1ydo_A 163 SEALFEFGISELS-L-GDTIGAA--------NPAQVETVLEALLARFPA-NQIALHFHDTR-------G---------TA 215 (307)
T ss_dssp HHHHHHHTCSCEE-E-ECSSCCC--------CHHHHHHHHHHHHTTSCG-GGEEEECBGGG-------S---------CH
T ss_pred HHHHHhcCCCEEE-E-cCCCCCc--------CHHHHHHHHHHHHHhCCC-CeEEEEECCCC-------c---------hH
Confidence 9999999998654 3 2432211 112378899999987752 45666543211 1 22
Q ss_pred HHHHHHHHHcCCcEEEeccC-----------CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHH----HHhccCCCC
Q 008423 148 LLYLKKKVDAGADLIITQLF-----------YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFL----RMTGFCKTK 212 (566)
Q Consensus 148 l~~Lk~KvdAGAdFiITQlf-----------fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~----r~~~l~Gv~ 212 (566)
+.....=++|||+.|=+=+. --.-.++.++..++..|++. || +...+. .+.+.+|..
T Consensus 216 ~AN~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~g~~t----~i----dl~~L~~~~~~v~~~~~~~ 287 (307)
T 1ydo_A 216 LANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKT----NV----KLEKLLSAAKWIEEKMGKP 287 (307)
T ss_dssp HHHHHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHTTCBC----CC----CHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhcCCCC----Cc----CHHHHHHHHHHHHHHHCCC
Confidence 55556667899999877655 11223455555566666553 32 233322 234677888
Q ss_pred CCHHHHHHhC
Q 008423 213 IPAEITAALE 222 (566)
Q Consensus 213 VP~~il~~Le 222 (566)
+|........
T Consensus 288 ~~~~~~~~~~ 297 (307)
T 1ydo_A 288 LPSRNLQVFK 297 (307)
T ss_dssp CCCHHHHHHT
T ss_pred CchhhHHHHH
Confidence 8887766543
No 149
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=47.81 E-value=1.4e+02 Score=28.51 Aligned_cols=121 Identities=17% Similarity=0.171 Sum_probs=67.5
Q ss_pred ccCCCcCEEEecCCCCC---CCchhHHHHHHHHHhhcCCceeEEe---ccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 13 WWPTTRHSATSRWGAGG---STADLTLDIANRMQNTICVETMMHL---TCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 13 ~~~~~p~fVsVTwgagG---~~~~~Sl~la~~lq~~~Gle~i~HL---TCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
......+.|++.-+-+. .......+....+++..+ +++.-+ +| +++.+++......+.++|++-|..=+|-.
T Consensus 79 A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~-~l~~~~~~~~a~~a~eaGad~I~tstg~~ 156 (225)
T 1mzh_A 79 AVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETP-YLNEEEIKKAVEICIEAGADFIKTSTGFA 156 (225)
T ss_dssp HHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGG-GCCHHHHHHHHHHHHHHTCSEEECCCSCS
T ss_pred HHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCC-CCCHHHHHHHHHHHHHhCCCEEEECCCCC
Confidence 33455666664333221 112334455666666565 555555 54 57888888888888999999884322321
Q ss_pred CCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc
Q 008423 87 PHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL 166 (566)
Q Consensus 87 p~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl 166 (566)
.++ .+.+.++.+++..+....|-++|=.. + .+...+.+++|||.|=|-.
T Consensus 157 ----------~gg--a~~~~i~~v~~~v~~~ipVia~GGI~------t-------------~~da~~~l~aGA~~iG~s~ 205 (225)
T 1mzh_A 157 ----------PRG--TTLEEVRLIKSSAKGRIKVKASGGIR------D-------------LETAISMIEAGADRIGTSS 205 (225)
T ss_dssp ----------SSC--CCHHHHHHHHHHHTTSSEEEEESSCC------S-------------HHHHHHHHHTTCSEEEESC
T ss_pred ----------CCC--CCHHHHHHHHHHhCCCCcEEEECCCC------C-------------HHHHHHHHHhCchHHHHcc
Confidence 122 23566677776655445554554111 1 2334555679999876543
No 150
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=47.55 E-value=67 Score=33.86 Aligned_cols=91 Identities=18% Similarity=0.156 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEEEE--ecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccc
Q 008423 66 HALQTIKSNGIQNVLA--LRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNES 143 (566)
Q Consensus 66 ~~L~~a~~~GIrNILa--LrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~ 143 (566)
+.+..+.++|++-|.+ --|++. ...++|+.+++.++....+|.+..+
T Consensus 147 e~~~~lveaGvdvIvldta~G~~~--------------~~~e~I~~ik~~~~i~Vi~g~V~t~----------------- 195 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHSL--------------NIIRTLKEIKSKMNIDVIVGNVVTE----------------- 195 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSBH--------------HHHHHHHHHHTTCCCEEEEEEECSH-----------------
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcc--------------cHHHHHHHHHhcCCCeEEEeecCCH-----------------
Q ss_pred hHHHHHHHHHHHHcCCcEEEe---------------ccCCCHHHHHHHHHHHHHcCCCCcEEe--eec
Q 008423 144 YQSDLLYLKKKVDAGADLIIT---------------QLFYDTDMFLKFVNDCRQIGITCPIVP--GIM 194 (566)
Q Consensus 144 ~~~dl~~Lk~KvdAGAdFiIT---------------QlffD~d~f~~f~~~~R~~Gi~vPIIp--GIm 194 (566)
++.+.+. ++|||+|+. .-.=+.+.+.+..+.+++.+ +|||+ ||+
T Consensus 196 --e~A~~a~---~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~--IPVIA~GGI~ 256 (400)
T 3ffs_A 196 --EATKELI---ENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFG--IPIIADGGIR 256 (400)
T ss_dssp --HHHHHHH---HTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTT--CCEEEESCCC
T ss_pred --HHHHHHH---HcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcC--CCEEecCCCC
No 151
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=47.53 E-value=77 Score=30.63 Aligned_cols=51 Identities=10% Similarity=0.106 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCH
Q 008423 149 LYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNY 199 (566)
Q Consensus 149 ~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~ 199 (566)
.+.+.=.++|||++.-...-..+.+.++++.+++.|...|-+.||.+.+|.
T Consensus 83 ~~i~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~G~~~~~~l~v~~~ts~ 133 (245)
T 1eix_A 83 HAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSM 133 (245)
T ss_dssp HHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSCTTC
T ss_pred HHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCCCcEEEEEecCCC
Confidence 345555679999999999888888889999999888634566788877764
No 152
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=47.14 E-value=86 Score=29.00 Aligned_cols=116 Identities=13% Similarity=0.102 Sum_probs=68.0
Q ss_pred eeEEeccccCCHHHHHHHHHHHHHcCCCEEEE--ecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCC
Q 008423 50 TMMHLTCTNMPVEKIDHALQTIKSNGIQNVLA--LRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPE 127 (566)
Q Consensus 50 ~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILa--LrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPE 127 (566)
.++.+.|-|. ..+.+.++.+.+.|++-+-+ +-|-.+ ..+....++++.|++..+..+.+++-.+.-
T Consensus 6 ~~~~i~a~D~--~~~~~~~~~~~~~G~~~i~~~~~dg~~~----------~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~ 73 (220)
T 2fli_A 6 IAPSILAADY--ANFASELARIEETDAEYVHIDIMDGQFV----------PNISFGADVVASMRKHSKLVFDCHLMVVDP 73 (220)
T ss_dssp EEEBGGGSCG--GGHHHHHHHHHHTTCCEEEEEEEBSSSS----------SCBCBCHHHHHHHHTTCCSEEEEEEESSSG
T ss_pred EEEEEEeCCH--HHHHHHHHHHHHcCCCEEEEEeecCCCC----------CccccCHHHHHHHHHhCCCCEEEEEeecCH
Confidence 4566666654 67778889999999987532 223211 122335788888887664345555544321
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHH
Q 008423 128 GHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYK 200 (566)
Q Consensus 128 gHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~ 200 (566)
+ ..+ +.=.++|||+++--..-. +...+.++.+++.| .+|...+-|-+...
T Consensus 74 --------~---------~~i---~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e 123 (220)
T 2fli_A 74 --------E---------RYV---EAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPAT 123 (220)
T ss_dssp --------G---------GGH---HHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGG
T ss_pred --------H---------HHH---HHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHH
Confidence 0 113 333458999987644333 44556777888777 55677665544433
No 153
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=47.01 E-value=63 Score=33.23 Aligned_cols=132 Identities=11% Similarity=0.049 Sum_probs=78.9
Q ss_pred cCCCCCCCch---hHHHHHHHHHhhcC--CceeEEecccc------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCC
Q 008423 24 RWGAGGSTAD---LTLDIANRMQNTIC--VETMMHLTCTN------MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK 92 (566)
Q Consensus 24 TwgagG~~~~---~Sl~la~~lq~~~G--le~i~HLTCrd------~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~ 92 (566)
|+.-||+... ..++++..+++..| +++..-|++.+ .+.++....+..+.++|+.-|-+-.|........
T Consensus 197 ~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~ 276 (363)
T 3l5l_A 197 TDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNI 276 (363)
T ss_dssp CSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCC
T ss_pred CcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccccccc
Confidence 4445666332 25788888888776 56777788754 3445666667777899999887776653221110
Q ss_pred ccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcC-CcEE--EeccCCC
Q 008423 93 FVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAG-ADLI--ITQLFYD 169 (566)
Q Consensus 93 ~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAG-AdFi--ITQlffD 169 (566)
+.... +..++++.||+..+.. -|++.++ .+.+...+.+++| ||+| -+.++.|
T Consensus 277 --~~~~~--~~~~~~~~ir~~~~iP-Vi~~GgI--------------------~s~e~a~~~l~~G~aD~V~iGR~~lan 331 (363)
T 3l5l_A 277 --PWGPA--FMGPIAERVRREAKLP-VTSAWGF--------------------GTPQLAEAALQANQLDLVSVGRAHLAD 331 (363)
T ss_dssp --CCCTT--TTHHHHHHHHHHHTCC-EEECSST--------------------TSHHHHHHHHHTTSCSEEECCHHHHHC
T ss_pred --CCCcc--hhHHHHHHHHHHcCCc-EEEeCCC--------------------CCHHHHHHHHHCCCccEEEecHHHHhC
Confidence 00111 2467778888776421 2332221 1133445667788 9975 5677778
Q ss_pred HHHHHHHHHHH
Q 008423 170 TDMFLKFVNDC 180 (566)
Q Consensus 170 ~d~f~~f~~~~ 180 (566)
++-..++.+.+
T Consensus 332 Pdl~~k~~~~l 342 (363)
T 3l5l_A 332 PHWAYFAAKEL 342 (363)
T ss_dssp TTHHHHHHHHT
T ss_pred chHHHHHHHHc
Confidence 88777665443
No 154
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=46.97 E-value=2.3e+02 Score=28.32 Aligned_cols=107 Identities=13% Similarity=0.152 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCc--eeEEEEecCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDY--FGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~--F~IGVAgyPEgHpe~~~~~ 136 (566)
.+.+.+++.++...+.||+.|+++. - .|+. ..-..+.=.++++...+..+.. .-+|+ +. .
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~G-t---TGE~---~~Ls~eEr~~v~~~~v~~~~grvpViaGv-g~-~--------- 91 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCG-N---TSEF---YALSLEEAKEEVRRTVEYVHGRALVVAGI-GY-A--------- 91 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTS-G---GGTG---GGSCHHHHHHHHHHHHHHHTTSSEEEEEE-CS-S---------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCc-c---ccCc---ccCCHHHHHHHHHHHHHHhCCCCcEEEEe-Cc-C---------
Confidence 4789999999999999999998553 1 1111 1112223456777766654333 33343 21 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEEEe-ccCC---CHHHHHHHHHHHHHcCCCCcEEe
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLIIT-QLFY---DTDMFLKFVNDCRQIGITCPIVP 191 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-Qlff---D~d~f~~f~~~~R~~Gi~vPIIp 191 (566)
.++-++..+.=.++|||.++. .++| +.+.+.++.+.+-++ .++||+.
T Consensus 92 -------t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a-~~lPiil 142 (316)
T 3e96_A 92 -------TSTAIELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEA-LDFPSLV 142 (316)
T ss_dssp -------HHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHH-HTSCEEE
T ss_pred -------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-CCCCEEE
Confidence 113455555555689997544 4666 667788877776654 2488764
No 155
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=46.70 E-value=48 Score=33.00 Aligned_cols=127 Identities=15% Similarity=0.170 Sum_probs=74.2
Q ss_pred CCcCEEEecCCCCCCCchhHH-HHHHHHHhhcCCceeEEeccccC--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCC
Q 008423 16 TTRHSATSRWGAGGSTADLTL-DIANRMQNTICVETMMHLTCTNM--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK 92 (566)
Q Consensus 16 ~~p~fVsVTwgagG~~~~~Sl-~la~~lq~~~Gle~i~HLTCrd~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~ 92 (566)
...||+-..||...-.....+ +....++ .+|+.+.+-=|.--. .+..+++.|..|+++|++.|=+=.|--.-.
T Consensus 37 ~yID~lKfg~Gt~~l~~~~~l~eki~l~~-~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~--- 112 (251)
T 1qwg_A 37 DYIDFVKFGWGTSAVIDRDVVKEKINYYK-DWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDIS--- 112 (251)
T ss_dssp GGCSEEEECTTGGGGSCHHHHHHHHHHHH-TTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCC---
T ss_pred hhcceEEecCceeeecCHHHHHHHHHHHH-HcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCC---
Confidence 345787777766554444333 3444555 489998876552211 223899999999999999998655544321
Q ss_pred ccccCCCcccHHHHHHHHHHHcCC--ceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEec
Q 008423 93 FVQIQGGFACALDLVKHIRSAYGD--YFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQ 165 (566)
Q Consensus 93 ~~~~~~~F~~A~dLVk~Ir~~~gd--~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQ 165 (566)
-+.=..||+.+++ .|- -+.+|.= .|+.. . ..++.+-++..++=++|||+.+|.-
T Consensus 113 -------~~~~~~~I~~~~~-~G~~v~~EvG~k-~~~~~----~------~~~~~~~I~~~~~~LeAGA~~ViiE 168 (251)
T 1qwg_A 113 -------LEERNNAIKRAKD-NGFMVLTEVGKK-MPDKD----K------QLTIDDRIKLINFDLDAGADYVIIE 168 (251)
T ss_dssp -------HHHHHHHHHHHHH-TTCEEEEEECCS-SHHHH----T------TCCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred -------HHHHHHHHHHHHH-CCCEEeeecccc-CCccc----C------CCCHHHHHHHHHHHHHCCCcEEEEe
Confidence 1112345555543 331 1222210 01000 0 1245678999999999999999874
No 156
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=46.66 E-value=32 Score=32.96 Aligned_cols=63 Identities=16% Similarity=0.317 Sum_probs=36.2
Q ss_pred eeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 50 TMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 50 ~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
+=.|+...... ..+++.|..+.++||+.++++..++ ..+ ..+++. .+++++.+..++..+|..
T Consensus 9 ~H~Hl~~~~~~-~~~~~~l~~~~~~Gv~~~v~~~~~~-----------~~~---~~~~~l-~~~~~~~i~~~~GihP~~ 71 (272)
T 2y1h_A 9 CHCHLSAPDFD-RDLDDVLEKAKKANVVALVAVAEHS-----------GEF---EKIMQL-SERYNGFVLPCLGVHPVQ 71 (272)
T ss_dssp EEECTTSGGGT-TTHHHHHHHHHHTTEEEEEECCSSG-----------GGH---HHHHHH-HHHTTTTEEEEECCCSBC
T ss_pred EeeCCCchhhh-cCHHHHHHHHHHCCCCEEEEeCCCH-----------HHH---HHHHHH-HHHCCCCEEEEEEECCCc
Confidence 33455443222 3567789999999999999885432 112 223332 345775454555567743
No 157
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=46.03 E-value=1.2e+02 Score=30.03 Aligned_cols=97 Identities=12% Similarity=0.016 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH----HHHHHHcCCceeE-EEEecCCCCCCCCCCC
Q 008423 62 EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV----KHIRSAYGDYFGI-TVAGYPEGHPDTIGPD 136 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV----k~Ir~~~gd~F~I-GVAgyPEgHpe~~~~~ 136 (566)
.+....+..+.+.|.++|.+|..|.+ +..++. +.+++ .+...+| +...+|.+..
T Consensus 128 ~~~~~~~~~l~~~g~~~vaii~~~~~--------------~g~~~~~~~~~~l~~-~~~g~~vv~~~~~~~~~~------ 186 (387)
T 3i45_A 128 MQAAMLAAEAAKLPITRWATIAPNYE--------------YGQSAVARFKELLLA-ARPEVTFVAEQWPALYKL------ 186 (387)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCSSH--------------HHHHHHHHHHHHHHH-HCTTCEEEEEECCCTTCC------
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCch--------------HhHHHHHHHHHHHHH-hCCCcEEEeeecCCCCCc------
Confidence 34444555556789999999873321 223333 33333 3212343 3344554421
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCC--CCcEE
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGI--TCPIV 190 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi--~vPII 190 (566)
+....+.+++ ++++|.|+.-...+ ....+++.+++.|+ +++|+
T Consensus 187 ------d~~~~~~~i~---~~~~d~v~~~~~~~--~~~~~~~~~~~~g~~~~~~i~ 231 (387)
T 3i45_A 187 ------DAGPTVQALQ---QAEPEGLFNVLFGA--DLPKFVREGRVRGLFAGRQVV 231 (387)
T ss_dssp ------CHHHHHHHHH---HTCCSEEEECCCTT--HHHHHHHHHHHHTSSTTCEEE
T ss_pred ------CHHHHHHHHH---hCCCCEEEEcCccH--HHHHHHHHHHHcCCCCCCeEE
Confidence 1223344443 46899988754433 46688999999997 36655
No 158
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=45.71 E-value=73 Score=37.31 Aligned_cols=127 Identities=16% Similarity=0.152 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe---------cCCCC---CCCCCccccCC--
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL---------RGDPP---HGQDKFVQIQG-- 98 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL---------rGDpp---~~~~~~~~~~~-- 98 (566)
....++.+.+++..+++++.-++.. . +.+.+....+.++|+.-|.+. ..|.. ..+.+.....+
T Consensus 689 ~~~~~iv~~v~~~~~~Pv~vK~~~~-~--~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~ 765 (1025)
T 1gte_A 689 ELVRNICRWVRQAVQIPFFAKLTPN-V--TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGV 765 (1025)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECSC-S--SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEE
T ss_pred HHHHHHHHHHHHhhCCceEEEeCCC-h--HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCC
Confidence 3466788888887789988877652 2 245666777788999998872 22210 00000000011
Q ss_pred ----CcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE--eccCC-CHH
Q 008423 99 ----GFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII--TQLFY-DTD 171 (566)
Q Consensus 99 ----~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--TQlff-D~d 171 (566)
.+..+.++|+.+++..++---||+.|.= ..+...+.+.+|||.++ |-+++ +..
T Consensus 766 sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~--------------------s~~da~~~l~~Ga~~v~vg~~~l~~~~~ 825 (1025)
T 1gte_A 766 SGTAIRPIALRAVTTIARALPGFPILATGGID--------------------SAESGLQFLHSGASVLQVCSAVQNQDFT 825 (1025)
T ss_dssp ESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC--------------------SHHHHHHHHHTTCSEEEESHHHHTSCTT
T ss_pred CcccchhHHHHHHHHHHHHcCCCCEEEecCcC--------------------CHHHHHHHHHcCCCEEEEeeccccCCcc
Confidence 2233578898898877432244444321 12334566679999754 66665 776
Q ss_pred HHHHHHHHHHH
Q 008423 172 MFLKFVNDCRQ 182 (566)
Q Consensus 172 ~f~~f~~~~R~ 182 (566)
.+.++.+.++.
T Consensus 826 ~~~~~~~~l~~ 836 (1025)
T 1gte_A 826 VIQDYCTGLKA 836 (1025)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67666666553
No 159
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=45.51 E-value=72 Score=29.91 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCcee-EEeccccCC----------HHHHHHHHHHHHHcCCCEEEEecCCCC
Q 008423 37 DIANRMQNTICVETM-MHLTCTNMP----------VEKIDHALQTIKSNGIQNVLALRGDPP 87 (566)
Q Consensus 37 ~la~~lq~~~Gle~i-~HLTCrd~n----------~~~L~~~L~~a~~~GIrNILaLrGDpp 87 (566)
++.+.++ ..|+.+. .|... +.+ .+.++..+..|+++|++.|.+..|..+
T Consensus 50 ~~~~~l~-~~gl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~ 109 (278)
T 1i60_A 50 DLAEYFQ-THHIKPLALNALV-FFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTE 109 (278)
T ss_dssp HHHHHHH-TSSCEEEEEEEEE-CCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCS
T ss_pred HHHHHHH-HcCCCeeeecccc-ccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 4445555 5899986 67653 322 467888899999999999998766543
No 160
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=45.38 E-value=1.1e+02 Score=32.76 Aligned_cols=94 Identities=15% Similarity=0.230 Sum_probs=52.6
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchH
Q 008423 66 HALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQ 145 (566)
Q Consensus 66 ~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~ 145 (566)
+.+..+.++|++-|.+=.. . +......++|+.+|+.+++ ..|.+. +- .+
T Consensus 234 ~~a~~l~~aG~d~I~id~a-~-----------g~~~~~~~~i~~ir~~~p~-~~Vi~g-~v------~t----------- 282 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSS-H-----------GHSEGVLQRIRETRAAYPH-LEIIGG-NV------AT----------- 282 (496)
T ss_dssp HHHHHHHHTTCSEEEEECS-C-----------TTSHHHHHHHHHHHHHCTT-CCEEEE-EE------CS-----------
T ss_pred HHHHHHHhccCceEEeccc-c-----------ccchHHHHHHHHHHHHCCC-ceEEEc-cc------Cc-----------
Confidence 3345556679885543222 1 1234578899999998864 344332 11 01
Q ss_pred HHHHHHHHHHHcCCcEEEec-----cCC----------CHHHHHHHHHHHHHcCCCCcEEe--eec
Q 008423 146 SDLLYLKKKVDAGADLIITQ-----LFY----------DTDMFLKFVNDCRQIGITCPIVP--GIM 194 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQ-----lff----------D~d~f~~f~~~~R~~Gi~vPIIp--GIm 194 (566)
.+..++=++||||+|+-+ .+. +...+.+..+.+++.+ +|||+ ||.
T Consensus 283 --~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~--iPVIa~GGI~ 344 (496)
T 4fxs_A 283 --AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYG--IPVIADGGIR 344 (496)
T ss_dssp --HHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGT--CCEEEESCCC
T ss_pred --HHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCC--CeEEEeCCCC
Confidence 122344457999999865 222 2344445555555444 89998 764
No 161
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=45.23 E-value=1.9e+02 Score=26.72 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=56.8
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHH
Q 008423 67 ALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQS 146 (566)
Q Consensus 67 ~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~ 146 (566)
.+..+.++|.+-|.+-..+... .. ....++++.+|+.++ .+.+++- .| +. .
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~~---------p~-~~~~~~i~~~~~~~~-~~~v~~~----~~----t~----------~ 130 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQR---------PK-ETLDELVSYIRTHAP-NVEIMAD----IA----TV----------E 130 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSCC---------SS-SCHHHHHHHHHHHCT-TSEEEEE----CS----SH----------H
T ss_pred HHHHHHhCCCCEEEEeeecccC---------cc-cCHHHHHHHHHHhCC-CceEEec----CC----CH----------H
Confidence 3455667888877765433211 00 135688999998875 3566542 22 11 2
Q ss_pred HHHHHHHHHHcCCcEEEecc-CC-----C---HHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHH
Q 008423 147 DLLYLKKKVDAGADLIITQL-FY-----D---TDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 147 dl~~Lk~KvdAGAdFiITQl-ff-----D---~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~ 205 (566)
+. ++=.++|+|+|.+-. .| + ...-.+.++++++. .++||++ .=.|.|...+.++
T Consensus 131 e~---~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~-~~ipvia-~GGI~~~~~~~~~ 193 (223)
T 1y0e_A 131 EA---KNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQS-VDAKVIA-EGNVITPDMYKRV 193 (223)
T ss_dssp HH---HHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHH-CCSEEEE-ESSCCSHHHHHHH
T ss_pred HH---HHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhh-CCCCEEE-ecCCCCHHHHHHH
Confidence 33 334578999997643 22 1 22223456666654 4688865 1123455554443
No 162
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=45.18 E-value=2.3e+02 Score=28.38 Aligned_cols=126 Identities=14% Similarity=0.146 Sum_probs=68.2
Q ss_pred CchhHHHHHHHHHhhcCCceeEE------ecccc---------CCHHHHH-HHHHHHHHcCCCEEEEe------cCCCCC
Q 008423 31 TADLTLDIANRMQNTICVETMMH------LTCTN---------MPVEKID-HALQTIKSNGIQNVLAL------RGDPPH 88 (566)
Q Consensus 31 ~~~~Sl~la~~lq~~~Gle~i~H------LTCrd---------~n~~~L~-~~L~~a~~~GIrNILaL------rGDpp~ 88 (566)
.+..++.++..+.. .+++.|.. |+.++ -+....- ..+.-++..|.+.|-+| ..|..
T Consensus 86 ~S~~~~av~~~~~~-~~ip~is~~~~~~~ls~~~~~~~~fr~~p~~~~~~~a~~~~l~~~~w~~v~ii~~~d~~~~~~~- 163 (435)
T 1dp4_A 86 CVYSAAPVGRFTAH-WRVPLLTAGAPALGIGVKDEYALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRP- 163 (435)
T ss_dssp SHHHHHHHHHHHHH-HTCCEEESCCCCGGGGCTTTSTTEEECSCCHHHHHHHHHHHHHHHTCCSEEEEEEECCSSSCCH-
T ss_pred ChHHHHHHHHHHHh-cCCcEEcccccccccCcccccCeEEEecCcHHHHHHHHHHHHHHCCCcEEEEEEEccCCCCcch-
Confidence 34556666666654 67776643 22221 0222222 23333467799998888 33311
Q ss_pred CCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC
Q 008423 89 GQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY 168 (566)
Q Consensus 89 ~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff 168 (566)
.+....++.+.+.++.| .||....+.. +. . .+...+.+|++++|+.||. +.
T Consensus 164 ----------~g~~~~~~~~~~~~~~g--~~v~~~~~~~--~~---~----------~d~~~~l~~i~~~~~viv~--~~ 214 (435)
T 1dp4_A 164 ----------CFFIVEGLYMRVRERLN--ITVNHQEFVE--GD---P----------DHYPKLLRAVRRKGRVIYI--CS 214 (435)
T ss_dssp ----------HHHHHHHHHHHHHHHHC--CEEEEEEECT--TC---G----------GGHHHHHHHHHHHCSEEEE--ES
T ss_pred ----------HHHHHHHHHHHHHhhcC--eEEEEEEEec--Cc---h----------hhHHHHHHHHHhhCceEEE--ec
Confidence 11223445566655355 4665444431 11 1 2344445555557898886 33
Q ss_pred CHHHHHHHHHHHHHcCCCC
Q 008423 169 DTDMFLKFVNDCRQIGITC 187 (566)
Q Consensus 169 D~d~f~~f~~~~R~~Gi~v 187 (566)
..+....+++.+++.|++-
T Consensus 215 ~~~~~~~~~~~a~~~g~~~ 233 (435)
T 1dp4_A 215 SPDAFRNLMLLALNAGLTG 233 (435)
T ss_dssp CHHHHHHHHHHHHHTTCCT
T ss_pred ChHHHHHHHHHHHHcCCCC
Confidence 4566777999999998764
No 163
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=45.03 E-value=2.6e+02 Score=28.34 Aligned_cols=146 Identities=13% Similarity=0.040 Sum_probs=81.9
Q ss_pred cCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCC---CCCccccCCCcccHHHHHHHHHHHcCCceeEEE
Q 008423 46 ICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHG---QDKFVQIQGGFACALDLVKHIRSAYGDYFGITV 122 (566)
Q Consensus 46 ~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~---~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGV 122 (566)
.+.+.+++|.++ +.+.+.+....+.++|++-|=+=-|-|... ..+...-....+...++|+.+++..+ +-|.+
T Consensus 56 ~~~p~~vQL~g~--~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~--~PV~v 131 (350)
T 3b0p_A 56 EEHPIALQLAGS--DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VPVTV 131 (350)
T ss_dssp GGCSEEEEEECS--CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS--SCEEE
T ss_pred CCCeEEEEeCCC--CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC--CceEE
Confidence 577889999854 578888888888999999887666655311 00100111233457788888887664 45555
Q ss_pred EecCCCCCCCCCCCCCCCccchHHHHHHHHHH-HHcCCcEEEecc-----CCCHH-------HHHHHHHHHHHcCCCCcE
Q 008423 123 AGYPEGHPDTIGPDGVASNESYQSDLLYLKKK-VDAGADLIITQL-----FYDTD-------MFLKFVNDCRQIGITCPI 189 (566)
Q Consensus 123 AgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~K-vdAGAdFiITQl-----ffD~d-------~f~~f~~~~R~~Gi~vPI 189 (566)
-.-+.. .+..+ . .+...+.++ .++|+|+|+.+- .|... ....++.++++.--++||
T Consensus 132 KiR~g~-~~~~~---------~-~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPV 200 (350)
T 3b0p_A 132 KMRLGL-EGKET---------Y-RGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTF 200 (350)
T ss_dssp EEESCB-TTCCC---------H-HHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEE
T ss_pred EEecCc-Ccccc---------H-HHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeE
Confidence 222211 11111 1 233333333 368999987664 23221 124566777765226887
Q ss_pred EeeecccCCHHHHHHHhc
Q 008423 190 VPGIMPINNYKGFLRMTG 207 (566)
Q Consensus 190 IpGImPI~s~~~~~r~~~ 207 (566)
|.+ =-|.|...+.++.+
T Consensus 201 ian-GgI~s~eda~~~l~ 217 (350)
T 3b0p_A 201 VTN-GGIRSLEEALFHLK 217 (350)
T ss_dssp EEE-SSCCSHHHHHHHHT
T ss_pred EEE-CCcCCHHHHHHHHh
Confidence 753 25677777766544
No 164
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=44.40 E-value=1.4e+02 Score=32.16 Aligned_cols=116 Identities=13% Similarity=0.119 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHc-----CCceeEEEEecCCCCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAY-----GDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~-----gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
.+.+.+....+.++..+.++-.+- .--+.-.-.|+++.+.... .....+|++.-...
T Consensus 194 ~l~eal~~m~~~~i~~lpVVDe~g---------~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~--------- 255 (511)
T 3usb_A 194 TLSEAEKILQKYKIEKLPLVDNNG---------VLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTA--------- 255 (511)
T ss_dssp CHHHHHHHHHHHTCSEEEEECTTS---------BEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSST---------
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCC---------CEeeeccHHHHHHhhhcccchhhhccceeeeeeeeecc---------
Confidence 456777777888999998884321 1123445788888875311 12355666653321
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEEEeccCC-CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLIITQLFY-DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff-D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
..++++++=+++|+|.++-..-- +...+.++++.+++.--++||+.|- +.+...++++.
T Consensus 256 --------d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~--v~t~e~a~~~~ 315 (511)
T 3usb_A 256 --------DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN--VATAEATKALI 315 (511)
T ss_dssp --------THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHH
T ss_pred --------chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee--eccHHHHHHHH
Confidence 34677777789999988765433 4566778888888874458888753 55666665543
No 165
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=44.37 E-value=1.2e+02 Score=30.77 Aligned_cols=113 Identities=16% Similarity=0.272 Sum_probs=68.1
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcc--cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCC
Q 008423 57 TNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFA--CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIG 134 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~--~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~ 134 (566)
..++.++..+.+..+.++|++-|=+==||..... .+ ..+|. ...+.++.+++..+ .-.|.+-++|..-
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~s-sp---~~g~~~~~~~e~l~~i~~~~~-~~~i~~l~~p~~~----- 94 (345)
T 1nvm_A 25 HQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGS-SF---NYGFGRHTDLEYIEAVAGEIS-HAQIATLLLPGIG----- 94 (345)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCC-BT---TTBCCSSCHHHHHHHHHTTCS-SSEEEEEECBTTB-----
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCC-CC---cccCCCCCHHHHHHHHHhhCC-CCEEEEEecCCcc-----
Confidence 3567788888888888999998886212211000 00 01222 36777888876544 3466665677321
Q ss_pred CCCCCCccchHHHHHHHHHHHHcCCcEEEe-ccCCCHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 135 PDGVASNESYQSDLLYLKKKVDAGADLIIT-QLFYDTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 135 ~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-QlffD~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
. .+.+++-.++|+|.+.. =.+=+.+.+.+.++.+++.|+. ++..+
T Consensus 95 ~------------~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~--v~~~~ 140 (345)
T 1nvm_A 95 S------------VHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMD--TVGFL 140 (345)
T ss_dssp C------------HHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCE--EEEEE
T ss_pred c------------HHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCE--EEEEE
Confidence 1 23455666789996543 1223457888999999999965 55555
No 166
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=44.00 E-value=3.2e+02 Score=29.89 Aligned_cols=128 Identities=16% Similarity=0.066 Sum_probs=78.2
Q ss_pred hhccCCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccC---CHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 008423 11 TAWWPTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNM---PVEKIDHALQTIKSNGIQNVLALRGDPP 87 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~---n~~~L~~~L~~a~~~GIrNILaLrGDpp 87 (566)
.+......+-|.|-. +.... ......+..+++ .|+++...++|.+- +.+.+.+.+..+.++|++- +.| .|-.
T Consensus 124 e~a~~aGvd~vrIf~-s~sd~-~ni~~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~-I~L-~DT~ 198 (539)
T 1rqb_A 124 DKSAENGMDVFRVFD-AMNDP-RNMAHAMAAVKK-AGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADS-IAL-KDMA 198 (539)
T ss_dssp HHHHHTTCCEEEECC-TTCCT-HHHHHHHHHHHH-TTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSE-EEE-EETT
T ss_pred HHHHhCCCCEEEEEE-ehhHH-HHHHHHHHHHHH-CCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCE-EEe-CCCC
Confidence 444455556666543 22222 334566666664 79998778877554 6677788888889999974 444 3332
Q ss_pred CCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC
Q 008423 88 HGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF 167 (566)
Q Consensus 88 ~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf 167 (566)
... .-....+||+.+++..++...|++-++=..- .-+.....=++|||+.|=|=+.
T Consensus 199 G~~--------~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~G----------------lAvAN~laAveAGa~~VD~ti~ 254 (539)
T 1rqb_A 199 ALL--------KPQPAYDIIKAIKDTYGQKTQINLHCHSTTG----------------VTEVSLMKAIEAGVDVVDTAIS 254 (539)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHCTTCCEEEEEBCTTS----------------CHHHHHHHHHHTTCSEEEEBCG
T ss_pred CCc--------CHHHHHHHHHHHHHhcCCCceEEEEeCCCCC----------------hHHHHHHHHHHhCCCEEEEecc
Confidence 111 1123789999999888633567766533211 2255555667899998866553
No 167
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=43.64 E-value=1.4e+02 Score=28.19 Aligned_cols=109 Identities=10% Similarity=0.112 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCC----c---------------cccCCCcccHHH-HHHHHHHHcCCceeEEEEe
Q 008423 65 DHALQTIKSNGIQNVLALRGDPPHGQDK----F---------------VQIQGGFACALD-LVKHIRSAYGDYFGITVAG 124 (566)
Q Consensus 65 ~~~L~~a~~~GIrNILaLrGDpp~~~~~----~---------------~~~~~~F~~A~d-LVk~Ir~~~gd~F~IGVAg 124 (566)
++.|..+.++||..++++..++...... | ...........+ +++.. +++++. .+|++.
T Consensus 16 ~~~l~~m~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~n~~~~~~~-~~~p~~-~~~~g~ 93 (272)
T 3cjp_A 16 EKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKELTNVI-QAYPSR-YVGFGN 93 (272)
T ss_dssp HHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHHHHHH-HHSTTT-EEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccccchhhhhhhhhhcccccccCCchhhHHHHHhhHHHHHHHH-HhCCCe-EEEEEE
Confidence 6778888999999999887654310000 0 000000111122 33333 457764 477888
Q ss_pred cCCCCCCCCCCCCCCCccchHHHHHHHHHHH-HcCCcEEE-eccCC-CHHHHHHHHHHHHHc-CCCCcEE
Q 008423 125 YPEGHPDTIGPDGVASNESYQSDLLYLKKKV-DAGADLII-TQLFY-DTDMFLKFVNDCRQI-GITCPIV 190 (566)
Q Consensus 125 yPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI-TQlff-D~d~f~~f~~~~R~~-Gi~vPII 190 (566)
.|-..+. +..++.|++-+ +.|+..|- .-+-. +.+.|..+++.|++. | +||+
T Consensus 94 ~p~~~~~-------------~~~~~el~~~~~~~g~~gi~~~g~~~~~~~~~~~~~~~a~~~~~--lpv~ 148 (272)
T 3cjp_A 94 VPVGLSE-------------NDTNSYIEENIVNNKLVGIGELTPASGQIKSLKPIFKYSMDSGS--LPIW 148 (272)
T ss_dssp CCTTCCH-------------HHHHHHHHHHTTTTTCSEEEEECCCTTCGGGGHHHHHHHHHTTC--CCEE
T ss_pred eCCCCCc-------------HHHHHHHHHHHHhcCceEEEecCCCCCccHHHHHHHHHHHhccC--CcEE
Confidence 7754321 12234444423 35776652 11111 346788999999998 7 4554
No 168
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=43.49 E-value=1e+02 Score=32.25 Aligned_cols=156 Identities=15% Similarity=0.119 Sum_probs=92.6
Q ss_pred ccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCC
Q 008423 55 TCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIG 134 (566)
Q Consensus 55 TCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~ 134 (566)
+....+.+++.+..+++.+.|.+.|=+ .|.++... ..........++.|+.||+..|+.+.|.+=+|- + .+
T Consensus 120 ~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~---~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-~----~~ 190 (405)
T 3rr1_A 120 WVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI---IDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG-R----VS 190 (405)
T ss_dssp ECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC---BCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS-C----BC
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc---cccchhHHHHHHHHHHHHHHhCCCceEEEECCC-C----CC
Confidence 334457888999999999999999887 55543211 001123445788899999999888888775431 1 12
Q ss_pred CCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cC
Q 008423 135 PDGVASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FC 209 (566)
Q Consensus 135 ~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~ 209 (566)
. .+..++.+.++ .|.+| |-|++- |.+. +.++++. ..+||..|=. +.+...+.++.+ .+
T Consensus 191 ~----------~~A~~~~~~L~~~~i~~-iEeP~~~~d~~~----~~~l~~~-~~iPIa~dE~-i~~~~~~~~~l~~~a~ 253 (405)
T 3rr1_A 191 A----------PMAKVLIKELEPYRPLF-IEEPVLAEQAET----YARLAAH-THLPIAAGER-MFSRFDFKRVLEAGGV 253 (405)
T ss_dssp H----------HHHHHHHHHHGGGCCSC-EECSSCCSSTHH----HHHHHTT-CSSCEEECTT-CCSHHHHHHHHHHCCC
T ss_pred H----------HHHHHHHHHHHhcCCCE-EECCCCcccHHH----HHHHHhc-CCCCEEecCC-cCCHHHHHHHHHHhCC
Confidence 1 33444444443 46555 579886 4433 3445543 4689888754 567777776543 23
Q ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 210 KTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 210 Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
.+-.|+- .+-=|+.-+.+++......|
T Consensus 254 d~v~~d~--------------~~~GGitea~kia~lA~~~g 280 (405)
T 3rr1_A 254 SILQPDL--------------SHAGGITECVKIAAMAEAYD 280 (405)
T ss_dssp SEECCBT--------------TTTTHHHHHHHHHHHHHTTT
T ss_pred CeEEECh--------------hhcCCHHHHHHHHHHHHHcC
Confidence 2222210 11226666667777666666
No 169
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=43.34 E-value=1.1e+02 Score=32.02 Aligned_cols=157 Identities=10% Similarity=0.037 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.+=+=-|.+..+...+..........++.|+.||+..|+.+.|.+=+|- ..+.
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~-----~~~~--- 214 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG-----QMVP--- 214 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS-----CBCH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC-----CCCH---
Confidence 37788888888888999998865333221110000000112345678899999999988888874431 1121
Q ss_pred CCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~V 213 (566)
.+..++.++++ .|.+ .|-|++- |.+. ..++++. ..+||..|=. +.+...+.++.+ .+.+-.
T Consensus 215 -------~~A~~~~~~L~~~~i~-~iEeP~~~~d~~~----~~~l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~ 280 (412)
T 4e4u_A 215 -------SSAIRLAKRLEKYDPL-WFEEPVPPGQEEA----IAQVAKH-TSIPIATGER-LTTKYEFHKLLQAGGASILQ 280 (412)
T ss_dssp -------HHHHHHHHHHGGGCCS-EEECCSCSSCHHH----HHHHHHT-CSSCEEECTT-CCHHHHHHHHHHTTCCSEEC
T ss_pred -------HHHHHHHHHhhhcCCc-EEECCCChhhHHH----HHHHHhh-CCCCEEecCc-cCCHHHHHHHHHcCCCCEEE
Confidence 34445555554 4555 4679987 4444 3444443 4689887744 566777766543 233222
Q ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 214 PAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 214 P~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
|+- .+-=|+.-+.+++......|+
T Consensus 281 ~d~--------------~~~GGit~~~kia~~A~~~gi 304 (412)
T 4e4u_A 281 LNV--------------ARVGGLLEAKKIATLAEVHYA 304 (412)
T ss_dssp CCT--------------TTTTSHHHHHHHHHHHHHTTC
T ss_pred eCc--------------cccCCHHHHHHHHHHHHHcCC
Confidence 211 111256666677766666663
No 170
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=43.20 E-value=2.6e+02 Score=28.12 Aligned_cols=147 Identities=15% Similarity=0.202 Sum_probs=86.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.|=+=-|. +......+.|+.||+..|+.+.|.+=+| .+ .+.
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~g~------------~~~~~d~~~v~avr~a~g~~~~l~vDan-~~----~~~---- 198 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKVGK------------DDIATDIARIQEIRKRVGSAVKLRLDAN-QG----WRP---- 198 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCS------------SCHHHHHHHHHHHHHHHCSSSEEEEECT-TC----SCH----
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCC------------CCHHHHHHHHHHHHHHhCCCCeEEEECC-CC----CCH----
Confidence 66777777788888898887643332 1234578899999998887777777654 11 122
Q ss_pred CccchHHHHHHHHHHHHc---CCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCC
Q 008423 140 SNESYQSDLLYLKKKVDA---GADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIP 214 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdA---GAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP 214 (566)
.+..++.+.++. |.+ .|=|++- .+.+.. ..++++. ..+||..+=. +.+...+.++.+ .+.+-.+
T Consensus 199 ------~~a~~~~~~l~~~~~~i~-~iEqP~~-~~d~~~-~~~l~~~-~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 199 ------KEAVTAIRKMEDAGLGIE-LVEQPVH-KDDLAG-LKKVTDA-TDTPIMADES-VFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp ------HHHHHHHHHHHHTTCCEE-EEECCSC-TTCHHH-HHHHHHH-CSSCEEECTT-CCSHHHHHHHHHHTCCSEEEE
T ss_pred ------HHHHHHHHHHhhcCCCce-EEECCCC-cccHHH-HHHHHhh-CCCCEEEcCC-CCCHHHHHHHHHhCCCCEEEe
Confidence 333344444543 444 5689983 333322 2333332 3589887754 677777776543 2332222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+- .+-=|+.-+.++++...++|++
T Consensus 268 k~--------------~~~GGit~~~~i~~~A~~~g~~ 291 (366)
T 1tkk_A 268 KL--------------MKAGGISGAEKINAMAEACGVE 291 (366)
T ss_dssp CH--------------HHHTSHHHHHHHHHHHHHHTCC
T ss_pred eh--------------hhhcCHHHHHHHHHHHHHcCCc
Confidence 11 2223677777777777777754
No 171
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=42.73 E-value=2.1e+02 Score=28.85 Aligned_cols=146 Identities=14% Similarity=0.108 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHH-cCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKS-NGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 60 n~~~L~~~L~~a~~-~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
+.+.+.+...++.+ .|.+.|=+=-|.+ .+....+.|+.+|+..|+.+.|.+=++ .+ .+.
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~------------~~~~~~e~v~avr~a~g~~~~l~vDan-~~----~~~--- 201 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGAR------------TPAQDLEHIRSIVKAVGDRASVRVDVN-QG----WDE--- 201 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSS------------CHHHHHHHHHHHHHHHGGGCEEEEECT-TC----CCH---
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCC------------ChHHHHHHHHHHHHhcCCCCEEEEECC-CC----CCH---
Confidence 56677777788888 9998876433321 234568889999998887777777664 11 122
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccC--CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLF--YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIP 214 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlf--fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP 214 (566)
++-++.+++=-+.|.+| |-|++ .|.+.+.+ +++. ..+||..|=. +.+...+.++.+. +.+-.+
T Consensus 202 ------~~a~~~~~~l~~~~i~~-iEqP~~~~~~~~~~~----l~~~-~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~i 268 (370)
T 1nu5_A 202 ------QTASIWIPRLEEAGVEL-VEQPVPRANFGALRR----LTEQ-NGVAILADES-LSSLSSAFELARDHAVDAFSL 268 (370)
T ss_dssp ------HHHHHHHHHHHHHTCCE-EECCSCTTCHHHHHH----HHHH-CSSEEEESTT-CCSHHHHHHHHHTTCCSEEEE
T ss_pred ------HHHHHHHHHHHhcCcce-EeCCCCcccHHHHHH----HHHh-CCCCEEeCCC-CCCHHHHHHHHHhCCCCEEEE
Confidence 12233333323457776 68998 34444433 3332 3589887754 5777777765433 322222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+- .+-=|+.-+.++++...++|++
T Consensus 269 k~--------------~~~GGit~~~~i~~~A~~~g~~ 292 (370)
T 1nu5_A 269 KL--------------CNMGGIANTLKVAAVAEAAGIS 292 (370)
T ss_dssp CH--------------HHHTSHHHHHHHHHHHHHHTCE
T ss_pred ch--------------hhcCCHHHHHHHHHHHHHcCCc
Confidence 11 2223677777777777777653
No 172
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=42.50 E-value=2.1e+02 Score=26.42 Aligned_cols=109 Identities=9% Similarity=0.042 Sum_probs=58.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE--ecCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA--GYPEGHPDTIGPDG 137 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA--gyPEgHpe~~~~~~ 137 (566)
+.....+....+.+.|+.-|.+. ..+.|+.||+..+-.+ +|+. .+|.+|......
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~--------------------~~~~i~~i~~~~~~pv-~~~~~~~~~~~~~~i~~~-- 77 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRAN--------------------TKEDILAIKETVDLPV-IGIVKRDYDHSDVFITAT-- 77 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE--------------------SHHHHHHHHHHCCSCE-EEECBCCCTTCCCCBSCS--
T ss_pred CCccHHHHHHHHHHCCCeeeccC--------------------CHHHHHHHHHhcCCCE-EeeeccCCCccccccCCc--
Confidence 34566666677778888776531 1355777887665333 4432 244445322111
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEEEecc--CCCH-HHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLIITQL--FYDT-DMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFiITQl--ffD~-d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
.++++.=.++|||+++--. ..++ +.+.++++.+|+.--..+|++++. +...+.+
T Consensus 78 ----------~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~---t~~e~~~ 134 (223)
T 1y0e_A 78 ----------SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA---TVEEAKN 134 (223)
T ss_dssp ----------HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS---SHHHHHH
T ss_pred ----------HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC---CHHHHHH
Confidence 2334444678999865322 2233 345677888887611366666653 4444443
No 173
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=42.34 E-value=1e+02 Score=29.66 Aligned_cols=118 Identities=14% Similarity=0.121 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+-..|.+.+..+.++|++-+-+=-+|-. + ...+....++|+.||+.+|....+.|-...+ +++
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~-----F---vpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~------~p~-- 77 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGH-----F---VPNITFGHPVVESLRKQLGQDPFFDMHMMVS------KPE-- 77 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSS-----S---SSCBCBCHHHHHHHHHHHCSSSCEEEEEECS------CGG--
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCC-----c---CcccccCHHHHHHHHHhhCCCCcEEEEEEeC------CHH--
Confidence 35566778899999999986665444421 1 1234567889999998752223344322221 111
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHH
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~ 205 (566)
. +.+.=.+||||++.-..--. +...+.++.+|+.|+. +..-+-|-++...+..+
T Consensus 78 -------~---~i~~~~~aGad~itvH~Ea~-~~~~~~i~~i~~~G~k--~gval~p~t~~e~l~~~ 131 (228)
T 3ovp_A 78 -------Q---WVKPMAVAGANQYTFHLEAT-ENPGALIKDIRENGMK--VGLAIKPGTSVEYLAPW 131 (228)
T ss_dssp -------G---GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTTCE--EEEEECTTSCGGGTGGG
T ss_pred -------H---HHHHHHHcCCCEEEEccCCc-hhHHHHHHHHHHcCCC--EEEEEcCCCCHHHHHHH
Confidence 1 22333459999887765332 3467889999999854 33445555665554433
No 174
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=42.08 E-value=2.5e+02 Score=27.17 Aligned_cols=74 Identities=27% Similarity=0.291 Sum_probs=49.2
Q ss_pred cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 102 CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 102 ~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
++..+.+.+++.+|.. -++...||.+.. |. ...+.+++ ++++|.|+.-. .......+++.++
T Consensus 156 yg~~~~~~~~~~~g~~-vv~~~~~~~~~~---d~---------~~~l~~i~---~~~~d~v~~~~--~~~~~~~~~~~~~ 217 (353)
T 4gnr_A 156 YAKGIAKSFRESYKGE-IVADETFVAGDT---DF---------QAALTKMK---GKDFDAIVVPG--YYNEAGKIVNQAR 217 (353)
T ss_dssp HHHHHHHHHHHHCCSE-EEEEEEECTTCC---CC---------HHHHHHHH---TSCCSEEECCS--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCE-EEEEEeeCCCCC---CH---------HHHHHHHH---hcCCCEEEEec--CcHHHHHHHHHHH
Confidence 4566777777777642 456667776543 22 24455554 36999998643 3456678999999
Q ss_pred HcCCCCcEEeee
Q 008423 182 QIGITCPIVPGI 193 (566)
Q Consensus 182 ~~Gi~vPIIpGI 193 (566)
+.|++.|++.+-
T Consensus 218 ~~g~~~~~~~~~ 229 (353)
T 4gnr_A 218 GMGIDKPIVGGD 229 (353)
T ss_dssp HTTCCSCEEECG
T ss_pred HcCCCCcEEEec
Confidence 999999986543
No 175
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=41.92 E-value=18 Score=35.06 Aligned_cols=113 Identities=17% Similarity=0.214 Sum_probs=62.1
Q ss_pred CceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCC
Q 008423 48 VETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPE 127 (566)
Q Consensus 48 le~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPE 127 (566)
+++-.||...... ..+++.|..+.++||+.++++..++ ..+..+.+ . .+++++ +..+++.+|.
T Consensus 14 ~~~~~hl~~~~~~-~~~~~~l~~~~~~GV~~~v~~~~~~-----------~~~~~~~~---l-~~~~p~-i~~~~G~hP~ 76 (268)
T 1j6o_A 14 VDTHAHLHFHQFD-DDRNAVISSFEENNIEFVVNVGVNL-----------EDSKKSLD---L-SKTSDR-IFCSVGVHPH 76 (268)
T ss_dssp EEEEECTTSGGGT-TTHHHHHHTTTTTTEEEEEEECSSH-----------HHHHHHHH---H-HTTCTT-EEEEECCCGG
T ss_pred cccccCCCChhhc-cCHHHHHHHHHHcCCCEEEEeCCCH-----------HHHHHHHH---H-HHHCCC-EEEEEeeccc
Confidence 4566777765443 3577888889999999999886432 11222333 2 345764 5555556664
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHH-----c----CCcEEEe-c-cCCCHHHHHHHHHHHHHcCCCCcEE
Q 008423 128 GHPDTIGPDGVASNESYQSDLLYLKKKVD-----A----GADLIIT-Q-LFYDTDMFLKFVNDCRQIGITCPIV 190 (566)
Q Consensus 128 gHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd-----A----GAdFiIT-Q-lffD~d~f~~f~~~~R~~Gi~vPII 190 (566)
..++.. + .+++.|++-++ + |-|+... + .-.+.+.|...++.+++.| +||+
T Consensus 77 ~~~~~~--~---------~~~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~--lPv~ 137 (268)
T 1j6o_A 77 DAKEVP--E---------DFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLN--LPLV 137 (268)
T ss_dssp GGGGCC--T---------THHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHT--CCEE
T ss_pred cccccC--H---------HHHHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhC--CCEE
Confidence 322211 1 23444444222 1 2333221 1 1224556788888888888 5654
No 176
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=41.81 E-value=1.3e+02 Score=30.96 Aligned_cols=155 Identities=14% Similarity=0.081 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEe-c-----CCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLAL-R-----GDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTI 133 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaL-r-----GDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~ 133 (566)
+.+++.+...++.+.|.+.+=+= . |+...................+.|+.||+..|+.+.|.+=++ .+ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan-~~----~ 220 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENH-GH----T 220 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT-TC----S
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECC-CC----C
Confidence 77888888888889999887642 1 432100000000011233467889999998888888887553 11 1
Q ss_pred CCCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--c
Q 008423 134 GPDGVASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--F 208 (566)
Q Consensus 134 ~~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l 208 (566)
+. .+..++.++++ .|.+ .|-|++- |.+.+ +++++. ..+||..|=. +.+...+.++.+ .
T Consensus 221 ~~----------~~ai~~~~~l~~~~i~-~iE~P~~~~d~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~~ 283 (403)
T 2ox4_A 221 DL----------VSAIQFAKAIEEFNIF-FYEEINTPLNPRLL----KEAKKK-IDIPLASGER-IYSRWGFLPFLEDRS 283 (403)
T ss_dssp CH----------HHHHHHHHHHGGGCEE-EEECCSCTTSTHHH----HHHHHT-CCSCEEECTT-CCHHHHHHHHHHTTC
T ss_pred CH----------HHHHHHHHHHHhhCCC-EEeCCCChhhHHHH----HHHHHh-CCCCEEecCC-cCCHHHHHHHHHcCC
Confidence 22 23334444454 4554 5789875 33333 334443 4689877644 455666666543 2
Q ss_pred CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 209 CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 209 ~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
+.+-.|+- .+-=|+.-+.++++...+.|
T Consensus 284 ~d~v~ik~--------------~~~GGite~~~i~~~A~~~g 311 (403)
T 2ox4_A 284 IDVIQPDL--------------GTCGGFTEFKKIADMAHIFE 311 (403)
T ss_dssp CSEECCCH--------------HHHTHHHHHHHHHHHHHHTT
T ss_pred CCEEecCc--------------cccCCHHHHHHHHHHHHHcC
Confidence 33222210 12236777778777777776
No 177
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=41.77 E-value=2.4e+02 Score=28.64 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.|=+=-|++ .+....+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~------------~~~~~~e~v~avr~a~G~d~~l~vDan-~~----~~~---- 204 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP------------DLKEDVDRVSALREHLGDSFPLMVDAN-MK----WTV---- 204 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------SHHHHHHHHHHHHHHHCTTSCEEEECT-TC----SCH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC------------CHHHHHHHHHHHHHHhCCCCeEEEECC-CC----CCH----
Confidence 778888888888899988876433431 234578899999999887788877553 11 122
Q ss_pred CccchHHHHHHHHHHH-HcCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCC
Q 008423 140 SNESYQSDLLYLKKKV-DAGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIP 214 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~Kv-dAGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP 214 (566)
.+..++.+.+ +.|.+| |-|++- |.+.+.++ ++. ..+||+.+=. +.+...+.++.+ .+.+-.+
T Consensus 205 ------~~a~~~~~~l~~~~i~~-iEqP~~~~d~~~~~~l----~~~-~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~i 271 (371)
T 2ovl_A 205 ------DGAIRAARALAPFDLHW-IEEPTIPDDLVGNARI----VRE-SGHTIAGGEN-LHTLYDFHNAVRAGSLTLPEP 271 (371)
T ss_dssp ------HHHHHHHHHHGGGCCSE-EECCSCTTCHHHHHHH----HHH-HCSCEEECTT-CCSHHHHHHHHHHTCCSEECC
T ss_pred ------HHHHHHHHHHHhcCCCE-EECCCCcccHHHHHHH----Hhh-CCCCEEeCCC-CCCHHHHHHHHHcCCCCEEee
Confidence 2333333344 357776 579874 44444333 322 2589887754 677877776643 2322222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+ +. +-=|+.-+.++++...+.|++
T Consensus 272 k-----~~---------~~GGi~~~~~i~~~A~~~gi~ 295 (371)
T 2ovl_A 272 D-----VS---------NIGGYTTFRKVAALAEANNML 295 (371)
T ss_dssp C-----TT---------TTTSHHHHHHHHHHHHHTTCC
T ss_pred C-----cc---------ccCCHHHHHHHHHHHHHcCCe
Confidence 1 11 111566667777777777643
No 178
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=41.65 E-value=47 Score=31.57 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=47.0
Q ss_pred CCCch-hHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTAD-LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~-~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++ ..++-|..+.+++|++.-.++..-.++.+.+.+.+..|.+.|++=|.|..|-.
T Consensus 30 GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~a 88 (181)
T 4b4k_A 30 GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGA 88 (181)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSS
T ss_pred CCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEecccc
Confidence 44444 34455555555799999999999999999999999999999999999988764
No 179
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=41.56 E-value=40 Score=32.18 Aligned_cols=49 Identities=10% Similarity=0.061 Sum_probs=34.3
Q ss_pred HHHHhhcCCceeEEeccccC--------CHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 008423 40 NRMQNTICVETMMHLTCTNM--------PVEKIDHALQTIKSNGIQNVLALRGDPPH 88 (566)
Q Consensus 40 ~~lq~~~Gle~i~HLTCrd~--------n~~~L~~~L~~a~~~GIrNILaLrGDpp~ 88 (566)
..+.+..|+.+..|-+-.+. ..+.+++.+..|+++|++.|.+..|..+.
T Consensus 54 ~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~ 110 (286)
T 3dx5_A 54 LNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGS 110 (286)
T ss_dssp HHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCG
T ss_pred HHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCc
Confidence 33334589998877332211 23577888999999999999988887653
No 180
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=41.47 E-value=87 Score=30.26 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=64.4
Q ss_pred hhccCCCcCEEEecCCC-CCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 008423 11 TAWWPTTRHSATSRWGA-GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHG 89 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwga-gG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~ 89 (566)
..+.+...++|+|-.-+ . . ...++.+.+++ .|+.+..=+.. ..+.+.++..|. +++-||+++=+|--+
T Consensus 74 ~~~~~aGAd~itvh~Ea~~-~---~~~~~i~~i~~-~G~k~gv~lnp-~tp~~~~~~~l~-----~~D~VlvmsV~pGfg 142 (231)
T 3ctl_A 74 AQLARAGADFITLHPETIN-G---QAFRLIDEIRR-HDMKVGLILNP-ETPVEAMKYYIH-----KADKITVMTVDPGFA 142 (231)
T ss_dssp HHHHHHTCSEEEECGGGCT-T---THHHHHHHHHH-TTCEEEEEECT-TCCGGGGTTTGG-----GCSEEEEESSCTTCS
T ss_pred HHHHHcCCCEEEECcccCC-c---cHHHHHHHHHH-cCCeEEEEEEC-CCcHHHHHHHHh-----cCCEEEEeeeccCcC
Confidence 33445556776665433 2 1 13345555554 67766655422 223334433332 567777666555433
Q ss_pred CCCccccCCCcc-cHHHHHHHHHHHc---CCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe-
Q 008423 90 QDKFVQIQGGFA-CALDLVKHIRSAY---GDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT- 164 (566)
Q Consensus 90 ~~~~~~~~~~F~-~A~dLVk~Ir~~~---gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT- 164 (566)
+. .|. ...+-|+.+|+.. +-.+.|.|.|==. . +..++-++||||.+|.
T Consensus 143 gQ-------~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-------~-------------~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 143 GQ-------PFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-------Q-------------ATYEKLMAAGADVFIVG 195 (231)
T ss_dssp SC-------CCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-------T-------------TTHHHHHHHTCCEEEEC
T ss_pred Cc-------cccHHHHHHHHHHHHHHhccCCCceEEEECCcC-------H-------------HHHHHHHHcCCCEEEEc
Confidence 22 233 4777777777653 3347788776211 1 1134446799997765
Q ss_pred -ccCCCH
Q 008423 165 -QLFYDT 170 (566)
Q Consensus 165 -QlffD~ 170 (566)
=.+|..
T Consensus 196 ~saif~~ 202 (231)
T 3ctl_A 196 TSGLFNH 202 (231)
T ss_dssp TTTTGGG
T ss_pred cHHHhCC
Confidence 466643
No 181
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=41.38 E-value=69 Score=31.76 Aligned_cols=124 Identities=16% Similarity=0.155 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+.+++.++...+. ++.|+++. - .|+. ..-..+.=.++++...+ .-..-+|+.++-
T Consensus 16 iD~~~l~~lv~~li~~-v~gl~v~G-t---tGE~---~~Ls~~Er~~v~~~~~~--rvpviaGvg~~~------------ 73 (283)
T 2pcq_A 16 LDEEAFRELAQALEPL-VDGLLVYG-S---NGEG---VHLTPEERARGLRALRP--RKPFLVGLMEET------------ 73 (283)
T ss_dssp BCHHHHHHHHHHHGGG-SSCCEETC-T---TTTG---GGSCHHHHHHHHHTCCC--SSCCEEEECCSS------------
T ss_pred cCHHHHHHHHHHHHhh-CCEEEECC-c---CcCc---hhcCHHHHHHHHHHHHh--CCcEEEeCCCCC------------
Confidence 4888999999999888 98888663 2 1221 11112223445555443 222445555422
Q ss_pred CCccchHHHHHHHHHHHHcCCcEE-EeccCC----CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLI-ITQLFY----DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlff----D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~V 213 (566)
.++-++..+.=.++|||.+ +.-++| +.+.+.++.+.+-+ ++||+.==.|- .+|+.+
T Consensus 74 -----t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~---~lPiilYn~P~-----------~tg~~l 134 (283)
T 2pcq_A 74 -----LPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE---KMPLFLYHVPQ-----------NTKVDL 134 (283)
T ss_dssp -----HHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH---HSCEEEEECHH-----------HHCCCC
T ss_pred -----HHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc---CCCEEEEeCcc-----------ccCcCC
Confidence 1234555555556899964 455666 44667778777766 58886433332 247777
Q ss_pred CHHHHHHhCC
Q 008423 214 PAEITAALEP 223 (566)
Q Consensus 214 P~~il~~Le~ 223 (566)
+.+.+.+|..
T Consensus 135 ~~~~~~~La~ 144 (283)
T 2pcq_A 135 PLEAVEALAP 144 (283)
T ss_dssp CHHHHHHHTT
T ss_pred CHHHHHHHhc
Confidence 7777777754
No 182
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=41.26 E-value=95 Score=34.21 Aligned_cols=59 Identities=22% Similarity=0.373 Sum_probs=41.5
Q ss_pred EEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC-----------CCHHHHHHHHHHHHHcCCCCc
Q 008423 120 ITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF-----------YDTDMFLKFVNDCRQIGITCP 188 (566)
Q Consensus 120 IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf-----------fD~d~f~~f~~~~R~~Gi~vP 188 (566)
+|+.-|||-.+. ...++|++.|| ++|.+.+-+-.| ||.+.+.++++.|+++||.
T Consensus 2 ~G~~y~pe~w~~----------~~~~~dl~~mk---~~G~N~vR~~if~W~~~eP~~g~~d~~~ld~~ld~a~~~Gi~-- 66 (645)
T 1kwg_A 2 LGVCYYPEHWPK----------ERWKEDARRMR---EAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLK-- 66 (645)
T ss_dssp EEEECCGGGSCH----------HHHHHHHHHHH---HHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCE--
T ss_pred CCCcCCcccCCH----------HHHHHHHHHHH---HcCCCEEEEeeechhhcCCCCCccChHHHHHHHHHHHHCCCE--
Confidence 577888886432 23335555555 579999887643 7888899999999999976
Q ss_pred EEeee
Q 008423 189 IVPGI 193 (566)
Q Consensus 189 IIpGI 193 (566)
+|.++
T Consensus 67 vil~~ 71 (645)
T 1kwg_A 67 VVLGT 71 (645)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 44443
No 183
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=40.95 E-value=89 Score=30.67 Aligned_cols=24 Identities=8% Similarity=0.216 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCC
Q 008423 62 EKIDHALQTIKSNGIQNVLALRGD 85 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLrGD 85 (566)
..+.+.|..++++|++.|=+-..+
T Consensus 36 ~~l~~~l~~aa~~G~~~VEl~~~~ 59 (305)
T 3obe_A 36 QDMPNGLNRLAKAGYTDLEIFGYR 59 (305)
T ss_dssp TTHHHHHHHHHHHTCCEEEECCBC
T ss_pred cCHHHHHHHHHHcCCCEEEecccc
Confidence 368899999999999999755433
No 184
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=40.93 E-value=87 Score=30.60 Aligned_cols=106 Identities=15% Similarity=0.250 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCcc
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNE 142 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~ 142 (566)
.+++.|..+.++||...+++.-+.+.. .. ...-.+++.++ .+++.| +|+++.+ |..
T Consensus 48 ~~e~~l~~md~~GV~~~V~~~~~~~~~------~~---~~N~~~~~~~~-~~p~r~-~~~~~v~---p~~---------- 103 (291)
T 3irs_A 48 SLELMFEEMAAAGIEQGVCVGRNSSVL------GS---VSNADVAAVAK-AYPDKF-HPVGSIE---AAT---------- 103 (291)
T ss_dssp CHHHHHHHHHHTTCCEEEEECCEETTT------EE---CCHHHHHHHHH-HSTTTE-EEEEECC---CSS----------
T ss_pred CHHHHHHHHHHCCCCEEEEcCCCcccc------cc---ccHHHHHHHHH-HCCCcE-EEEEecC---ccC----------
Confidence 355677888999999999875442110 00 11222333343 577654 5666543 210
Q ss_pred chHHHHHHHHHHHHcCCcEE--Eec----cC-CCHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 143 SYQSDLLYLKKKVDAGADLI--ITQ----LF-YDTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 143 ~~~~dl~~Lk~KvdAGAdFi--ITQ----lf-fD~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
.+..++.|++-.+.|+.-| .++ .+ .+-+.|..+++.|.+.|+.+=|.+|-
T Consensus 104 -~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~ 160 (291)
T 3irs_A 104 -RKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGG 160 (291)
T ss_dssp -HHHHHHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSS
T ss_pred -HHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCC
Confidence 0122334444224566533 222 12 36678899999999998544444443
No 185
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=40.90 E-value=54 Score=30.94 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=46.0
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+=|....+++|++.-.++..-+++.+.+.+....+.+.|++=|.+..|-.
T Consensus 20 GS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~a 78 (173)
T 4grd_A 20 GSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGA 78 (173)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESS
T ss_pred CcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 344442 3444444445799999999999999999999999999999999999888764
No 186
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=40.63 E-value=2.8e+02 Score=27.42 Aligned_cols=178 Identities=10% Similarity=0.064 Sum_probs=102.4
Q ss_pred ccchhhccCCCcCEEEecCCCC--------CCCch----hHHHHHHHHHhhcCCceeEEeccc-------cCCHHHHHHH
Q 008423 7 SSGWTAWWPTTRHSATSRWGAG--------GSTAD----LTLDIANRMQNTICVETMMHLTCT-------NMPVEKIDHA 67 (566)
Q Consensus 7 ~~~~~~~~~~~p~fVsVTwgag--------G~~~~----~Sl~la~~lq~~~Gle~i~HLTCr-------d~n~~~L~~~ 67 (566)
.++..+.+....+.|.|-.... +.+.+ .+.++++.+++ .|+++...+.|. ..+.+.+.+.
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~~~~~~~~~~ 164 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ-HQVRVRGYISCVLGCPYDGDVDPRQVAWV 164 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTTBCCCHHHHHHH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCCCCCHHHHHHH
Confidence 3455555556666666643221 11222 24555666664 799987776664 1467888899
Q ss_pred HHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHH
Q 008423 68 LQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSD 147 (566)
Q Consensus 68 L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~d 147 (566)
++.+.+.|++.|- |- |-.... .-....+||+.|++..++ ..|++-++=.. . .-
T Consensus 165 ~~~~~~~G~d~i~-l~-DT~G~~--------~P~~~~~lv~~l~~~~~~-~~l~~H~Hn~~-----G-----------la 217 (302)
T 2ftp_A 165 ARELQQMGCYEVS-LG-DTIGVG--------TAGATRRLIEAVASEVPR-ERLAGHFHDTY-----G-----------QA 217 (302)
T ss_dssp HHHHHHTTCSEEE-EE-ESSSCC--------CHHHHHHHHHHHTTTSCG-GGEEEEEBCTT-----S-----------CH
T ss_pred HHHHHHcCCCEEE-Ee-CCCCCc--------CHHHHHHHHHHHHHhCCC-CeEEEEeCCCc-----c-----------HH
Confidence 9999999998654 43 543211 112378899999887742 45666553211 1 22
Q ss_pred HHHHHHHHHcCCcEEEeccC-----------CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHH----HHhccCCCC
Q 008423 148 LLYLKKKVDAGADLIITQLF-----------YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFL----RMTGFCKTK 212 (566)
Q Consensus 148 l~~Lk~KvdAGAdFiITQlf-----------fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~----r~~~l~Gv~ 212 (566)
.....+=+++||+.|=+=+. --.-.++.++..++..|++. || +...+. .+.+.+|..
T Consensus 218 ~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~~----~i----dl~~l~~~~~~~~~~~~~~ 289 (302)
T 2ftp_A 218 LANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHT----GV----DMHALVDAGQRICAVLGKS 289 (302)
T ss_dssp HHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCBC----CC----CHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCCC----Cc----CHHHHHHHHHHHHHHhCCC
Confidence 55566668899998866554 12223455555566666553 22 233222 234567777
Q ss_pred CCHHHHHH
Q 008423 213 IPAEITAA 220 (566)
Q Consensus 213 VP~~il~~ 220 (566)
+|......
T Consensus 290 ~~~~~~~~ 297 (302)
T 2ftp_A 290 NGSRAAKA 297 (302)
T ss_dssp CSCHHHHH
T ss_pred CCccchhh
Confidence 77765443
No 187
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=40.08 E-value=1.4e+02 Score=30.44 Aligned_cols=116 Identities=16% Similarity=0.224 Sum_probs=70.3
Q ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCccc-HHHHHHHHHHHcCCceeEEEEecCCCCCCCCC
Q 008423 56 CTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFAC-ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIG 134 (566)
Q Consensus 56 Crd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~-A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~ 134 (566)
...++.++..+.+.++.++|++.|=+=-+..|... + .+.+.. ..+.++.|++.-+..+..=+-+. + +.
T Consensus 18 ~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~--f---~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~-~-~~---- 86 (320)
T 3dxi_A 18 NWDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKE--Y---MGKFGYTPVSVLKHLRNISTKKIAIMLNEK-N-TT---- 86 (320)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSS--C---CCHHHHCCHHHHHHHHHHCCSEEEEEEEGG-G-CC----
T ss_pred CCcCCHHHHHHHHHHHHHhCCCEEEEecccCCccc--c---ccccccChHHHHHHHhhccCCeEEEEecCC-C-CC----
Confidence 35678888889999999999999876554433211 0 011111 25667777764333333322221 1 11
Q ss_pred CCCCCCccchHHHHHHHHHHHHcCCcEE-EeccCCCHHHHHHHHHHHHHcCCCCcEEeeec
Q 008423 135 PDGVASNESYQSDLLYLKKKVDAGADLI-ITQLFYDTDMFLKFVNDCRQIGITCPIVPGIM 194 (566)
Q Consensus 135 ~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlffD~d~f~~f~~~~R~~Gi~vPIIpGIm 194 (566)
+ .++..+..+.++|+|.| |+=.+.+.+.+.+.++.+++.|+. +...++
T Consensus 87 ~----------~dv~~~~~a~~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~--v~~~~~ 135 (320)
T 3dxi_A 87 P----------EDLNHLLLPIIGLVDMIRIAIDPQNIDRAIVLAKAIKTMGFE--VGFNVM 135 (320)
T ss_dssp G----------GGHHHHHGGGTTTCSEEEEEECGGGHHHHHHHHHHHHTTTCE--EEEEEC
T ss_pred h----------hhHHHHHHhhhcCCCEEEEEecHHHHHHHHHHHHHHHHCCCE--EEEEEE
Confidence 0 34777777777999854 444555678888888999999965 555554
No 188
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=40.07 E-value=2.8e+02 Score=27.72 Aligned_cols=88 Identities=15% Similarity=0.159 Sum_probs=52.3
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCC-ceeEE-EEecCCCCCCCCCCCCCCCccc
Q 008423 66 HALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGD-YFGIT-VAGYPEGHPDTIGPDGVASNES 143 (566)
Q Consensus 66 ~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd-~F~IG-VAgyPEgHpe~~~~~~~~~~~~ 143 (566)
..+.-++..|.+.|-+|.-|.. +...+.+.+++.... ..+|. ...||. +.
T Consensus 144 ~~~~~~~~~g~~~v~ii~~~~~--------------~g~~~~~~~~~~~~~~g~~v~~~~~~~~------d~-------- 195 (433)
T 4f11_A 144 AILKLLKHYQWKRVGTLTQDVQ--------------RFSEVRNDLTGVLYGEDIEISDTESFSN------DP-------- 195 (433)
T ss_dssp HHHHHHHHTTCCEEEEEEESSH--------------HHHHHHHHHHHHSSSSSCEEEEEEEESS------CC--------
T ss_pred HHHHHHHHcCCcEEEEEEecch--------------hhHHHHHHHHHHHHHcCceEEEEeccCc------CH--------
Confidence 3333446788888888854421 234455555544321 13443 234441 22
Q ss_pred hHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCC
Q 008423 144 YQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITC 187 (566)
Q Consensus 144 ~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~v 187 (566)
...+.++++ +++|.|+. +...+....+++++++.|++-
T Consensus 196 -~~~l~~i~~---~~~~vii~--~~~~~~~~~~~~~a~~~g~~~ 233 (433)
T 4f11_A 196 -CTSVKKLKG---NDVRIILG--QFDQNMAAKVFCCAYEENMYG 233 (433)
T ss_dssp -HHHHHHHHH---TTCCEEEE--ECCHHHHHHHHHHHHHTTCCS
T ss_pred -HHHHHHHhh---CCCeEEEE--eCcHHHHHHHHHHHHHcCCCC
Confidence 144555544 79998885 556778889999999999875
No 189
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=39.98 E-value=3.1e+02 Score=27.74 Aligned_cols=151 Identities=15% Similarity=0.117 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|.++.+ . ........+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~-~-----~~~~~~~~e~v~avr~a~g~d~~l~vDan-~~----~~~--- 213 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS-W-----APDVKMDLKACAAVREAVGPDIRLMIDAF-HW----YSR--- 213 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST-T-----CCCHHHHHHHHHHHHHHHCTTSEEEEECC-TT----CCH---
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc-c-----ccchHHHHHHHHHHHHHhCCCCeEEEECC-CC----CCH---
Confidence 4678888888888899998887544543211 0 11345678899999998888888887553 11 122
Q ss_pred CCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCC-HHHHHHHhcc--CCCC
Q 008423 139 ASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINN-YKGFLRMTGF--CKTK 212 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s-~~~~~r~~~l--~Gv~ 212 (566)
.+..++.+.++ .|.+| |-|++- |.+.+.+ +++. ..+||..+=. +.+ ...+.++.+. +.+-
T Consensus 214 -------~~a~~~~~~l~~~~i~~-iE~P~~~~~~~~~~~----l~~~-~~iPIa~dE~-~~~~~~~~~~~i~~~~~d~v 279 (382)
T 1rvk_A 214 -------TDALALGRGLEKLGFDW-IEEPMDEQSLSSYKW----LSDN-LDIPVVGPES-AAGKHWHRAEWIKAGACDIL 279 (382)
T ss_dssp -------HHHHHHHHHHHTTTCSE-EECCSCTTCHHHHHH----HHHH-CSSCEEECSS-CSSHHHHHHHHHHTTCCSEE
T ss_pred -------HHHHHHHHHHHhcCCCE-EeCCCChhhHHHHHH----HHhh-CCCCEEEeCC-ccCcHHHHHHHHHcCCCCEE
Confidence 23333334444 57775 689885 4444433 3332 3589877654 555 7777665432 2222
Q ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 213 IPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 213 VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
.++- .+-=|+.-+.++++...+.|+
T Consensus 280 ~ik~--------------~~~GGit~~~~i~~~A~~~g~ 304 (382)
T 1rvk_A 280 RTGV--------------NDVGGITPALKTMHLAEAFGM 304 (382)
T ss_dssp EECH--------------HHHTSHHHHHHHHHHHHHTTC
T ss_pred eeCc--------------hhcCCHHHHHHHHHHHHHcCC
Confidence 2210 222267777888888888874
No 190
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=39.98 E-value=53 Score=31.08 Aligned_cols=23 Identities=13% Similarity=0.294 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGD 85 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGD 85 (566)
..++.|..+.++||+.++++.-+
T Consensus 20 ~~~~~l~~~~~~Gv~~~v~~~~~ 42 (259)
T 1zzm_A 20 DEEASLQRAAQAGVGKIIVPATE 42 (259)
T ss_dssp CHHHHHHHHHHTTEEEEEEECCS
T ss_pred CHHHHHHHHHHcCCCEEEEecCC
Confidence 35678889999999999987443
No 191
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=39.88 E-value=1.5e+02 Score=29.39 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=23.3
Q ss_pred cCCcEEEeccCCCHHHHHHHHHHHHHcCCC---CcEEe
Q 008423 157 AGADLIITQLFYDTDMFLKFVNDCRQIGIT---CPIVP 191 (566)
Q Consensus 157 AGAdFiITQlffD~d~f~~f~~~~R~~Gi~---vPIIp 191 (566)
+++|.|+. ..++ .....+++.+++.|++ +||+.
T Consensus 196 ~~pdaI~~-~~~~-~~a~~~~~~~~~~G~~~~~~~~~~ 231 (385)
T 1pea_A 196 ARADVVFS-TVVG-TGTAELYRAIARRYGDGRRPPIAS 231 (385)
T ss_dssp HTCSEEEE-ECCT-HHHHHHHHHHHHHHCSSCCCCEEE
T ss_pred CCCCEEEE-eccc-ccHHHHHHHHHHcCCCcCCceEEe
Confidence 48898877 2233 3456788999999987 77664
No 192
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=39.74 E-value=2.4e+02 Score=27.05 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=67.5
Q ss_pred EeccccCC------HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE--e
Q 008423 53 HLTCTNMP------VEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA--G 124 (566)
Q Consensus 53 HLTCrd~n------~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA--g 124 (566)
=.+|+... .....+.-..+.+.|...|-+ | +.+-|+.||+...-. -||+- .
T Consensus 21 ivscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--~------------------~~~~i~~ir~~v~~P-vig~~k~d 79 (232)
T 3igs_A 21 IVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRI--E------------------GIDNLRMTRSLVSVP-IIGIIKRD 79 (232)
T ss_dssp EEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE--E------------------SHHHHHHHHTTCCSC-EEEECBCC
T ss_pred EEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEE--C------------------CHHHHHHHHHhcCCC-EEEEEeec
Confidence 34777665 666777777778999987764 1 134567787655322 24432 1
Q ss_pred cCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc--CCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHH
Q 008423 125 YPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL--FYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGF 202 (566)
Q Consensus 125 yPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl--ffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~ 202 (566)
|+. |+..-++. ++.+.+=+++|||+|+.-. .-+++.+.++++.+++.| +++++.+ .+...+
T Consensus 80 ~~~-~~~~I~~~-----------~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v---~t~eea 142 (232)
T 3igs_A 80 LDE-SPVRITPF-----------LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH--LLTMADC---SSVDDG 142 (232)
T ss_dssp CSS-CCCCBSCS-----------HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEEC---CSHHHH
T ss_pred CCC-cceEeCcc-----------HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC--CEEEEeC---CCHHHH
Confidence 221 11111111 2223344679999886433 345677888999999886 6677775 455555
Q ss_pred HHH
Q 008423 203 LRM 205 (566)
Q Consensus 203 ~r~ 205 (566)
.+.
T Consensus 143 ~~a 145 (232)
T 3igs_A 143 LAC 145 (232)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 193
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=39.10 E-value=69 Score=31.29 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCc
Q 008423 62 EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASN 141 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~ 141 (566)
..+++.|..+.++||..++++..+.... .-++..++ ++ ++++. .+|+++. ||+. .+
T Consensus 53 ~~~e~~l~~~~~~GV~~~V~v~~~~~~~---------~n~~~~~~---~~-~~p~r-~~g~~~v---~P~~--~~----- 108 (294)
T 4i6k_A 53 ATVQSFISHLDEHNFTHGVLVQPSFLGT---------NNQAMLNA---IQ-QYPDR-LKGIAVV---QHTT--TF----- 108 (294)
T ss_dssp BCHHHHHHHHHHTTCCEEEEECCGGGTT---------CCHHHHHH---HH-HSTTT-EEEEECC---CTTC--CH-----
T ss_pred CCHHHHHHHHHHcCCCeEEEecCccccc---------chHHHHHH---HH-HCCCe-EEEEEEe---CCcc--cH-----
Confidence 3577888889999999999985433110 11123333 33 57654 4676653 4432 11
Q ss_pred cchHHHHHHHHHHHHcCCcEEE--e--c--cCCCHHHHHHHHHHHHHcCCCCcEEe
Q 008423 142 ESYQSDLLYLKKKVDAGADLII--T--Q--LFYDTDMFLKFVNDCRQIGITCPIVP 191 (566)
Q Consensus 142 ~~~~~dl~~Lk~KvdAGAdFiI--T--Q--lffD~d~f~~f~~~~R~~Gi~vPIIp 191 (566)
.+++++.+ .|..-|- . + .-++.+.|...++.|++.| +||+.
T Consensus 109 ----~eL~~l~~---~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~g--lpv~i 155 (294)
T 4i6k_A 109 ----NELVNLKA---QGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLN--WQVEL 155 (294)
T ss_dssp ----HHHHHHHT---TTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTT--CEEEE
T ss_pred ----HHHHHHHH---CCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcC--CEEEE
Confidence 56777654 2554322 1 1 1235588999999999988 55543
No 194
>1jdp_A NPR-C, atrial natriuretic peptide clearance receptor; hormone-receptor complex, natriuretic peptide receptor, ALLO activation, signaling protein; HET: NDG NAG; 2.00A {Homo sapiens} SCOP: c.93.1.1 PDB: 1jdn_A* 1yk0_A* 1yk1_A*
Probab=39.10 E-value=2.7e+02 Score=28.07 Aligned_cols=130 Identities=8% Similarity=0.104 Sum_probs=69.5
Q ss_pred CCchhHHHHHHHHHhhcCCceeEE------ecccc----------CCHHHHHHHH-HHHHHcCCCEEEEecCCCCCCCCC
Q 008423 30 STADLTLDIANRMQNTICVETMMH------LTCTN----------MPVEKIDHAL-QTIKSNGIQNVLALRGDPPHGQDK 92 (566)
Q Consensus 30 ~~~~~Sl~la~~lq~~~Gle~i~H------LTCrd----------~n~~~L~~~L-~~a~~~GIrNILaLrGDpp~~~~~ 92 (566)
..+..+..++..+. ..+++.|.. |+-+. -+....-..+ .-++..|.+.|-+|.-|...+
T Consensus 92 ~~S~~~~~v~~~~~-~~~ip~is~~~~~~~ls~~~~~~~~~fr~~p~~~~~~~a~~~~~~~~~w~~v~ii~~d~~~g--- 167 (441)
T 1jdp_A 92 VCEYAAAPVARLAS-HWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLE--- 167 (441)
T ss_dssp CSHHHHHHHHHHHH-HHTCCEEESCCCSGGGGCTTTTTTTEEECSCCHHHHHHHHHHHHHHHTCCEEEEEEECCSSS---
T ss_pred CchhhHHHHHHHHh-hcCCcEEcCCCCchhhccccccCCceEEecCcHHHHHHHHHHHHHhcCCcEEEEEEEcCCcc---
Confidence 34455666666665 467776543 21111 0222233333 334678999998887553221
Q ss_pred ccccCCCcccHHHHHHHHHHHcCCceeEEEEec-CCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHH
Q 008423 93 FVQIQGGFACALDLVKHIRSAYGDYFGITVAGY-PEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTD 171 (566)
Q Consensus 93 ~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgy-PEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d 171 (566)
...+..+..|.+.+++ .| .||....+ |.+. .+...+.+|++++++.||. +.+.+
T Consensus 168 ----~~~~~~~~~~~~~~~~-~g--~~v~~~~~~~~~~----------------~d~~~~l~~i~~~~~vii~--~~~~~ 222 (441)
T 1jdp_A 168 ----RNCYFTLEGVHEVFQE-EG--LHTSIYSFDETKD----------------LDLEDIVRNIQASERVVIM--CASSD 222 (441)
T ss_dssp ----CHHHHHHHHHHHHHHH-HT--CEEEEEEECTTSC----------------CCHHHHHHHHHHHCSEEEE--ESCHH
T ss_pred ----cchHHHHHHHHHHHHh-cC--cEEEEEEecCCcc----------------cCHHHHHHHhhcCCcEEEE--ecCHH
Confidence 1111123344445544 44 45543333 3211 1133344455578998885 55667
Q ss_pred HHHHHHHHHHHcCCCCc
Q 008423 172 MFLKFVNDCRQIGITCP 188 (566)
Q Consensus 172 ~f~~f~~~~R~~Gi~vP 188 (566)
....+++.+++.|++-+
T Consensus 223 ~~~~~~~~~~~~gl~~~ 239 (441)
T 1jdp_A 223 TIRSIMLVAHRHGMTSG 239 (441)
T ss_dssp HHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 77889999999998643
No 195
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=38.97 E-value=3.7e+02 Score=28.36 Aligned_cols=131 Identities=9% Similarity=0.079 Sum_probs=73.1
Q ss_pred CCchhHHHHHHHHHhhcCCceeEEe------cccc---------CCHHHH-HHHHHHHHHcCCCEEEEecCCCCCCCCCc
Q 008423 30 STADLTLDIANRMQNTICVETMMHL------TCTN---------MPVEKI-DHALQTIKSNGIQNVLALRGDPPHGQDKF 93 (566)
Q Consensus 30 ~~~~~Sl~la~~lq~~~Gle~i~HL------TCrd---------~n~~~L-~~~L~~a~~~GIrNILaLrGDpp~~~~~~ 93 (566)
..+..++.++..+.. ++++.|.+- +-+. -+.... ...+.-++..|.+.|-+|.-|...+
T Consensus 125 ~~S~~s~~va~~~~~-~~iP~Is~~a~~~~lsd~~~~p~~fr~~p~d~~~~~a~~~ll~~fgw~~V~ii~~d~~~g---- 199 (555)
T 2e4u_A 125 SYSSVSIQVANLLRL-FQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYG---- 199 (555)
T ss_dssp SSHHHHHHHHHHHGG-GTCCEEESSCCCGGGGCTTTCTTEEESSCCHHHHHHHHHHHHHHTTCCEEEEEEESSTTH----
T ss_pred CCcHHHHHHHHHHhC-cCCceEeCCcCCCccCCcccCCCceeeCCChHHHHHHHHHHHHHcCCeEEEEEEeeChHH----
Confidence 345567777777764 787766432 1111 122222 3333344678999998886553211
Q ss_pred cccCCCcccHHHHHHHHHHHcCCceeEEE-EecCCCCCCCCCCCCCCCccchHHHHHHHHHHHH--cCCcEEEeccCCCH
Q 008423 94 VQIQGGFACALDLVKHIRSAYGDYFGITV-AGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVD--AGADLIITQLFYDT 170 (566)
Q Consensus 94 ~~~~~~F~~A~dLVk~Ir~~~gd~F~IGV-AgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd--AGAdFiITQlffD~ 170 (566)
-..+..|.+.++ +.| .||.. ..+|... + ..++..+.+|+. ++|+.||- +-+.
T Consensus 200 ------~~~~~~~~~~~~-~~g--i~v~~~~~~~~~~----~----------~~~~~~~l~~i~~~s~a~vIi~--~~~~ 254 (555)
T 2e4u_A 200 ------ETGIEAFEQEAR-LRN--ICIATAEKVGRSN----I----------RKSYDSVIRELLQKPNARVVVL--FMRS 254 (555)
T ss_dssp ------HHHHHHHHHHHH-TTT--CEEEEEEEECTTC----C----------HHHHHHHHHHHHTCTTCCEEEE--ECCH
T ss_pred ------HHHHHHHHHHHH-HCC--ccEEEEEEeCCCC----C----------hHHHHHHHHHHhccCCCCEEEE--EcCH
Confidence 011222333333 344 46643 3455321 1 155666667773 69999886 5567
Q ss_pred HHHHHHHHHHHHcCCCCcEE
Q 008423 171 DMFLKFVNDCRQIGITCPIV 190 (566)
Q Consensus 171 d~f~~f~~~~R~~Gi~vPII 190 (566)
+.+..+++.+++.|+..+.|
T Consensus 255 ~~~~~~~~~~~~~g~~~~~i 274 (555)
T 2e4u_A 255 DDSRELIAAANRVNASFTWV 274 (555)
T ss_dssp HHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHhcCCeEEE
Confidence 77788999999988744333
No 196
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=38.73 E-value=1.9e+02 Score=29.66 Aligned_cols=155 Identities=14% Similarity=0.095 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEec------CCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALR------GDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTI 133 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLr------GDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~ 133 (566)
+.+++.+...++.+.|.+.|=+=- |+...................+.|+.||+..|+.+.|.+=++ .+ .
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan-~~----~ 226 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMH-AF----T 226 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT-TC----S
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECC-CC----C
Confidence 678888888888899998886421 432000000000001233467889999998888888887653 11 1
Q ss_pred CCCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--c
Q 008423 134 GPDGVASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--F 208 (566)
Q Consensus 134 ~~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l 208 (566)
+. .+..++.++++ .|.+| |-|++- |.+.+.+ +++. ..+||..|=. +.+...+.++.+ .
T Consensus 227 ~~----------~~a~~~~~~l~~~~i~~-iE~P~~~~~~~~~~~----l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~~ 289 (407)
T 2o56_A 227 DT----------TSAIQFGRMIEELGIFY-YEEPVMPLNPAQMKQ----VADK-VNIPLAAGER-IYWRWGYRPFLENGS 289 (407)
T ss_dssp CH----------HHHHHHHHHHGGGCCSC-EECSSCSSSHHHHHH----HHHH-CCSCEEECTT-CCHHHHHHHHHHTTC
T ss_pred CH----------HHHHHHHHHHHhcCCCE-EeCCCChhhHHHHHH----HHHh-CCCCEEeCCC-cCCHHHHHHHHHcCC
Confidence 22 23333334443 46665 689875 4444433 3332 3689887754 556777766543 2
Q ss_pred CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 209 CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 209 ~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
+.+-.|+ + .+-=|+.-+.++++...+.|
T Consensus 290 ~d~v~ik-----~---------~~~GGite~~~i~~~A~~~g 317 (407)
T 2o56_A 290 LSVIQPD-----I---------CTCGGITEVKKICDMAHVYD 317 (407)
T ss_dssp CSEECCC-----T---------TTTTHHHHHHHHHHHHHTTT
T ss_pred CCEEecC-----c---------cccCCHHHHHHHHHHHHHcC
Confidence 3222221 0 11126666677777777666
No 197
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=38.51 E-value=1e+02 Score=31.53 Aligned_cols=144 Identities=8% Similarity=0.069 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|+ ......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------~~~~~~e~v~avr~a~g~d~~l~vDan-~~----~~~--- 202 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGA-------------DWQSDIDRIRACLPLLEPGEKAMADAN-QG----WRV--- 202 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCS-------------CHHHHHHHHHHHGGGSCTTCEEEEECT-TC----SCH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC-------------CHHHHHHHHHHHHHhcCCCCEEEEECC-CC----CCH---
Confidence 366777788888889998887653332 234578889999999988888887543 11 122
Q ss_pred CCccchHHHHHHHHHHHH-cCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCH
Q 008423 139 ASNESYQSDLLYLKKKVD-AGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPA 215 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~ 215 (566)
.+..++.+.++ +|. .|-|++-|.+. ..++++. ..+||+.+= -+.+...+.++.+. +.+-.++
T Consensus 203 -------~~a~~~~~~l~~~~i--~iE~P~~~~~~----~~~l~~~-~~iPI~~de-~i~~~~~~~~~i~~~~~d~v~ik 267 (379)
T 2rdx_A 203 -------DNAIRLARATRDLDY--ILEQPCRSYEE----CQQVRRV-ADQPMKLDE-CVTGLHMAQRIVADRGAEICCLK 267 (379)
T ss_dssp -------HHHHHHHHHTTTSCC--EEECCSSSHHH----HHHHHTT-CCSCEEECT-TCCSHHHHHHHHHHTCCSEEEEE
T ss_pred -------HHHHHHHHHHHhCCe--EEeCCcCCHHH----HHHHHhh-CCCCEEEeC-CcCCHHHHHHHHHcCCCCEEEEe
Confidence 23333444443 577 67999874443 3445543 468987764 45777777765432 2222110
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+. +-=|+.-+.++++...+.|++
T Consensus 268 -----~~---------~~GGit~~~~i~~~A~~~g~~ 290 (379)
T 2rdx_A 268 -----IS---------NLGGLSKARRTRDFLIDNRMP 290 (379)
T ss_dssp -----TT---------TTTSHHHHHHHHHHHHHTTCC
T ss_pred -----cc---------ccCCHHHHHHHHHHHHHcCCe
Confidence 11 111566667777777777754
No 198
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=38.44 E-value=2.2e+02 Score=27.32 Aligned_cols=128 Identities=20% Similarity=0.257 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCEE--EEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC-CCCCCCCCCCCCcc
Q 008423 66 HALQTIKSNGIQNV--LALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG-HPDTIGPDGVASNE 142 (566)
Q Consensus 66 ~~L~~a~~~GIrNI--LaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg-Hpe~~~~~~~~~~~ 142 (566)
..+..|.++|++-| .+--|.++. ........++++..+ .+|-.+-+.+ +|.| |- ....
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~--------~~~~~~~~~v~~~~~-~~g~~viv~~--~~~G~~l-~~~~------- 163 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDED--------WEAYRDLGMIAETCE-YWGMPLIAMM--YPRGKHI-QNER------- 163 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTH--------HHHHHHHHHHHHHHH-HHTCCEEEEE--EECSTTC-SCTT-------
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCH--------HHHHHHHHHHHHHHH-HcCCCEEEEe--CCCCccc-CCCC-------
Confidence 44566777899888 433443311 111223445555555 3565555543 3433 21 0111
Q ss_pred chHHHHHHH-HHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEE--eeecccCCHHHHHHH------hccCCCCC
Q 008423 143 SYQSDLLYL-KKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIV--PGIMPINNYKGFLRM------TGFCKTKI 213 (566)
Q Consensus 143 ~~~~dl~~L-k~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPII--pGImPI~s~~~~~r~------~~l~Gv~V 213 (566)
+. .++..+ +.=.++||||+.|-+-.|.+.+.+..+.+ ++||+ -||-+ .+.+.+..+ +...|+.+
T Consensus 164 ~~-~~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~i~~~~-----~ipvva~GGi~~-~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 164 DP-ELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKGC-----PAPVVVAGGPKT-NTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp CH-HHHHHHHHHHHHTTCSEEEECCCSSHHHHHHHHHHC-----SSCEEEECCSCC-SSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CH-hHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhC-----CCCEEEEeCCCC-CCHHHHHHHHHHHHHcCCcEEEe
Confidence 11 345555 45567999999998666777665544332 47764 45442 134332221 23566777
Q ss_pred CHHHHH
Q 008423 214 PAEITA 219 (566)
Q Consensus 214 P~~il~ 219 (566)
-..+++
T Consensus 237 g~~i~~ 242 (273)
T 2qjg_A 237 GRNIFQ 242 (273)
T ss_dssp CHHHHT
T ss_pred eHHhhC
Confidence 766653
No 199
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=38.22 E-value=2.4e+02 Score=29.60 Aligned_cols=124 Identities=12% Similarity=0.126 Sum_probs=71.9
Q ss_pred cCCHHHHHHHHHHH----HHcCCCEEEEecCCCC----------------CCCCCccccCCCccc------HHHHHHHHH
Q 008423 58 NMPVEKIDHALQTI----KSNGIQNVLALRGDPP----------------HGQDKFVQIQGGFAC------ALDLVKHIR 111 (566)
Q Consensus 58 d~n~~~L~~~L~~a----~~~GIrNILaLrGDpp----------------~~~~~~~~~~~~F~~------A~dLVk~Ir 111 (566)
+.|.+.+.+.+..+ +++|++-|.+=-|=.. ..-..|.+.+..|.. -..|+++|+
T Consensus 25 ~i~e~~i~~~ad~~~~gl~~~G~~~~~iDDgW~~~~~~~~~y~~~~~~~~d~~G~~~~~~~kFP~~~~~~Gl~~l~~~ih 104 (433)
T 3cc1_A 25 SVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSSAYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAIH 104 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTGGGTCCEEEECSCTTCCCTTSTTCCTTSCSCBCTTSCBCCCTTTCGGGTTTTTTHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcchhhCCeEEEECCCcCCCCCcccccccccccccCCCCCEeECCccCCCcccCCCHHHHHHHHH
Confidence 67899999998888 8899887664222000 011135555667887 567889998
Q ss_pred HHcCCceeEEEEecCCC--------CC--------------C---C----------CCCCCCCCccchHH-HHHHHHHHH
Q 008423 112 SAYGDYFGITVAGYPEG--------HP--------------D---T----------IGPDGVASNESYQS-DLLYLKKKV 155 (566)
Q Consensus 112 ~~~gd~F~IGVAgyPEg--------Hp--------------e---~----------~~~~~~~~~~~~~~-dl~~Lk~Kv 155 (566)
++ | +.+|+=.-|+- +| . . .+++ ++.... +++.| .
T Consensus 105 ~~-G--lk~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~~~~~~~~~~~lD~~~p~----~~~~~~~~~~~l---~ 174 (433)
T 3cc1_A 105 DL-G--LKFGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEG----AQSYYNSLFELY---A 174 (433)
T ss_dssp HT-T--CEEEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTCCBTTBTTEEEECTTSTT----HHHHHHHHHHHH---H
T ss_pred Hc-C--CeeEEEeCCCCchhccCCCCccccccceecccccCCcccCCCCCceeecCCCHH----HHHHHHHHHHHH---H
Confidence 75 5 34444444441 00 0 0 0110 011111 22222 3
Q ss_pred HcCCcEEEeccCC-------CHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 156 DAGADLIITQLFY-------DTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 156 dAGAdFiITQlff-------D~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
+.|.|||=.=+++ +.+.+..+.+.+++.| -||+..+
T Consensus 175 ~~GvDyvK~D~~~~~~~~~~~~~~~~~~~~aL~~~g--r~i~~sl 217 (433)
T 3cc1_A 175 QWGVDFVKVDDIAASRLYDTHLEEIKMIQRAIQACG--RPMVLSL 217 (433)
T ss_dssp HTTCCEEEEESCSCTTSSCCCHHHHHHHHHHHHHSS--SCCEEEC
T ss_pred HcCCCEEEeCCcccccCCcccHHHHHHHHHHHHhcC--CCEEEEe
Confidence 5699988655544 5688899999999887 4666544
No 200
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=38.08 E-value=1.5e+02 Score=29.39 Aligned_cols=63 Identities=11% Similarity=0.099 Sum_probs=32.8
Q ss_pred hccCCCcCEEEe-c------CCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEE
Q 008423 12 AWWPTTRHSATS-R------WGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVL 80 (566)
Q Consensus 12 ~~~~~~p~fVsV-T------wgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNIL 80 (566)
.+.....++|++ + -..+|+......+....+.+..+++++...... . ....+.+.++|++-|+
T Consensus 36 ~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g--~----~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 36 IAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIG--H----IVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTT--C----HHHHHHHHHHTCSEEE
T ss_pred HHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEeccccc--c----hHHHHHHHHCCCCEEE
Confidence 344455666643 2 122343344456666677666777766432211 1 2334455568999886
No 201
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=37.87 E-value=2.6e+02 Score=29.47 Aligned_cols=69 Identities=16% Similarity=0.268 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCcc
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNE 142 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~ 142 (566)
...+.+..+.++|++.|.+-.+ .+.+....+.|+.+|+.+++ +.|.+.+ +. +.
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~------------~G~~~~~~e~i~~i~~~~p~-~pvi~g~---~~----t~------- 289 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTA------------HGHSRRVIETLEMIKADYPD-LPVVAGN---VA----TP------- 289 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCS------------CCSSHHHHHHHHHHHHHCTT-SCEEEEE---EC----SH-------
T ss_pred hHHHHHHHHHHhCCCEEEEEec------------CCchHHHHHHHHHHHHHCCC-ceEEeCC---cC----CH-------
Confidence 3455677788899998775221 12344578899999998853 4454421 11 11
Q ss_pred chHHHHHHHHHHHHcCCcEEEe
Q 008423 143 SYQSDLLYLKKKVDAGADLIIT 164 (566)
Q Consensus 143 ~~~~dl~~Lk~KvdAGAdFiIT 164 (566)
++.+.|. ++|||+|+.
T Consensus 290 ---e~a~~l~---~~G~d~I~v 305 (494)
T 1vrd_A 290 ---EGTEALI---KAGADAVKV 305 (494)
T ss_dssp ---HHHHHHH---HTTCSEEEE
T ss_pred ---HHHHHHH---HcCCCEEEE
Confidence 3444443 699999985
No 202
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=37.64 E-value=58 Score=31.97 Aligned_cols=99 Identities=11% Similarity=-0.013 Sum_probs=53.6
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEe-cCCCCCCCCCCCCCCCccc
Q 008423 65 DHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAG-YPEGHPDTIGPDGVASNES 143 (566)
Q Consensus 65 ~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAg-yPEgHpe~~~~~~~~~~~~ 143 (566)
++.+..+.++||..++++..+... ...++..+ +.+.++ ..+|++| .|-..++
T Consensus 37 ~~ll~~~~~~GV~~~V~v~~~~~~---------~~n~~l~~----la~~~p--~~~g~vg~v~~~~~~------------ 89 (303)
T 4do7_A 37 DALHPLMHAQALGASIAVQARAGR---------DETAFLLE----LACDEA--RIAAVVGWEDLRAPQ------------ 89 (303)
T ss_dssp HHHHHHHHHTTCCEEEEECCSSSH---------HHHHHHHH----HHTTCT--TEEEEEECCCTTCTT------------
T ss_pred HHHHHHHHhcCCcEEEEEccCCcH---------HHHHHHHH----HHHhCC--CeEEEEEEeCCCCch------------
Confidence 445666788999999998765321 11222333 233455 4677765 3322211
Q ss_pred hHHHHHHHHHHHHcCCcEE--EeccCCC------HHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 144 YQSDLLYLKKKVDAGADLI--ITQLFYD------TDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 144 ~~~dl~~Lk~KvdAGAdFi--ITQlffD------~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
...+++++. +.|..-| ..|..-+ -+.|...++.|++.| +||+.-+-+
T Consensus 90 ~~~~L~~l~---~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--lpv~ih~~~ 144 (303)
T 4do7_A 90 LAERVAEWR---GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQAND--YVYDVLVFE 144 (303)
T ss_dssp HHHHHTTCC---SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTT--CEEEECCCG
T ss_pred HHHHHHHHh---hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCC--CeEEEecCH
Confidence 125566654 4555433 2332212 246778889999888 666655443
No 203
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=37.50 E-value=3.7e+02 Score=27.94 Aligned_cols=129 Identities=10% Similarity=0.135 Sum_probs=71.4
Q ss_pred CCCCchhHHHHHHHHHhhcCCceeEEecc----ccC------------CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC
Q 008423 28 GGSTADLTLDIANRMQNTICVETMMHLTC----TNM------------PVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 91 (566)
Q Consensus 28 gG~~~~~Sl~la~~lq~~~Gle~i~HLTC----rd~------------n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~ 91 (566)
|+..+..|+.++..+.. .+++.|.+-+. ++. +..+......-++..|.+.|-+|.-|...+
T Consensus 122 G~~~S~~s~ava~i~~~-~~iP~Is~~a~~~~lsd~~~~p~~fr~~psd~~~~~a~~~ll~~fgw~~V~ii~~dd~~G-- 198 (479)
T 3sm9_A 122 GGSYSSVSIQVANLLRL-FQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYG-- 198 (479)
T ss_dssp CCSSHHHHHHHHHHHGG-GTCCEEESSCCCGGGGCTTTTTTEEESSCCTHHHHHHHHHHHHHTTCCEEEEEEESSHHH--
T ss_pred CCCCcHHHHHHHHHHhc-CCccEECCCcCCccccCcccCCCeEEeCCcHHHHHHHHHHHHHHCCCeEEEEEEecchhh--
Confidence 44455667777777764 67776654211 111 222333344445779999998887442110
Q ss_pred CccccCCCcccHHHHHHHHHHHcCCceeEEEE-ecCCCCCCCCCCCCCCCccchHHHHHHHH-HHH-HcCCcEEEeccCC
Q 008423 92 KFVQIQGGFACALDLVKHIRSAYGDYFGITVA-GYPEGHPDTIGPDGVASNESYQSDLLYLK-KKV-DAGADLIITQLFY 168 (566)
Q Consensus 92 ~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA-gyPEgHpe~~~~~~~~~~~~~~~dl~~Lk-~Kv-dAGAdFiITQlff 168 (566)
-..+.++.+.++ +.| .||... .+|.... ..+..... +++ +++|+.||. +.
T Consensus 199 --------~~~~~~~~~~~~-~~G--i~v~~~~~i~~~~~--------------~~d~~~~l~~~i~~s~a~vIi~--~~ 251 (479)
T 3sm9_A 199 --------ETGIEAFEQEAR-LRN--ISIATAEKVGRSNI--------------RKSYDSVIRELLQKPNARVVVL--FM 251 (479)
T ss_dssp --------HHHHHHHHHHHH-TTT--CEEEEEEEECC--C--------------HHHHHHHHHHHHTCTTCCEEEE--EC
T ss_pred --------HHHHHHHHHHHH-HCC--ceEEEEEEcCCCCC--------------hHHHHHHHHHHHhcCCCeEEEE--Ec
Confidence 001223333333 344 466533 4554321 13444433 444 469999885 55
Q ss_pred CHHHHHHHHHHHHHcCCC
Q 008423 169 DTDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 169 D~d~f~~f~~~~R~~Gi~ 186 (566)
+.+.+..+++.+++.|++
T Consensus 252 ~~~~~~~l~~~~~~~g~~ 269 (479)
T 3sm9_A 252 RSDDSRELIAAASRANAS 269 (479)
T ss_dssp CHHHHHHHHHHHHHTTCC
T ss_pred ChHHHHHHHHHHHHhCCE
Confidence 677888999999999987
No 204
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=37.48 E-value=19 Score=36.87 Aligned_cols=54 Identities=17% Similarity=0.063 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCC
Q 008423 61 VEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPE 127 (566)
Q Consensus 61 ~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPE 127 (566)
.+.....|.+|+++||+.|+.++.+-. + .+...|.+.. +++|.....++..||.
T Consensus 62 ~~~~~~el~~a~~aGv~tiV~~~~~~~--~----------r~~~~l~~la-~~~g~~i~~~tG~hp~ 115 (339)
T 3gtx_A 62 LASCTETARALLARGIQTVVDATPNGC--G----------RNPAFLREVS-EATGLQILCATGFYYE 115 (339)
T ss_dssp HHHHHHHHHHHHHTTEEEEEECCCTTT--T----------CCHHHHHHHH-HHHCCEEECEECCCCT
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCcc--C----------cCHHHHHHHH-HHcCCcEEEEcCCCcc
Confidence 345678889999999999998873311 0 1122333333 4567555667778885
No 205
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=37.38 E-value=76 Score=29.93 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=45.4
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+=|....+++|++.-.++..-.++.+.+.+.+..|.+.|++=|.+..|-.
T Consensus 15 gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~a 73 (174)
T 3lp6_A 15 GSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGA 73 (174)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESS
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCch
Confidence 444443 3344444444799999999999999999999999999999999888887754
No 206
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=37.24 E-value=1.6e+02 Score=28.07 Aligned_cols=67 Identities=6% Similarity=-0.081 Sum_probs=38.5
Q ss_pred hhccCCCcCEEEecCCCCC-CCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEec
Q 008423 11 TAWWPTTRHSATSRWGAGG-STADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR 83 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwgagG-~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLr 83 (566)
.++.....+++.|++-... ......+++...+.+..+++++.---.+ +.++++ .+.+.|+..+++-+
T Consensus 37 ~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~--~~~~i~----~~~~~Gad~v~lg~ 104 (266)
T 2w6r_A 37 VEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAG--KMEHFL----EAFLAGADKALAAS 104 (266)
T ss_dssp HHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCC--STHHHH----HHHHHTCSEEECCC
T ss_pred HHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCC--CHHHHH----HHHHcCCcHhhhhH
Confidence 3455566788888874321 1122246667777777787777632222 344444 34457998887543
No 207
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=37.03 E-value=69 Score=30.09 Aligned_cols=58 Identities=17% Similarity=0.230 Sum_probs=45.1
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+=+....+++|++.-.++..-.++.+.+.+.+..|.+.|++=|.+..|-.
T Consensus 14 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~a 72 (169)
T 3trh_A 14 GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLA 72 (169)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSS
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChh
Confidence 444443 3333444444799999999999999999999999999999999888887754
No 208
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=36.43 E-value=2.2e+02 Score=29.26 Aligned_cols=144 Identities=14% Similarity=0.130 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.|=+=-|. +......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~------------~~~~~~~e~v~avR~avg~d~~l~vDan-~~----~~~---- 220 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ------------PDGALDIARVTAVRKHLGDAVPLMVDAN-QQ----WDR---- 220 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC------------SCHHHHHHHHHHHHHHHCTTSCEEEECT-TC----CCH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC------------CCHHHHHHHHHHHHHHcCCCCEEEEECC-CC----CCH----
Confidence 77888888888899999887653232 1244578889999998888888887543 11 122
Q ss_pred CccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCC
Q 008423 140 SNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIP 214 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP 214 (566)
.+..++.++++ .|.+| |-|++- |.+.+ .++++. ..+||..+=. +.+...+.++.+ .+.+-.+
T Consensus 221 ------~~a~~~~~~l~~~~i~~-iE~P~~~~~~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 221 ------PTAQRMCRIFEPFNLVW-IEEPLDAYDHEGH----AALALQ-FDTPIATGEM-LTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp ------HHHHHHHHHHGGGCCSC-EECCSCTTCHHHH----HHHHHH-CSSCEEECTT-CCSHHHHHHHHHTTCCSEECC
T ss_pred ------HHHHHHHHHHHhhCCCE-EECCCCcccHHHH----HHHHHh-CCCCEEeCCC-cCCHHHHHHHHHCCCCCEEee
Confidence 23333444454 57776 579875 44443 334433 3589887654 667777776543 2322222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
+- .+-=|+.-+.++++...+.|+
T Consensus 288 k~--------------~~~GGit~~~~i~~~A~~~gi 310 (393)
T 2og9_A 288 DA--------------PRVGGITPFLKIASLAEHAGL 310 (393)
T ss_dssp CH--------------HHHTSHHHHHHHHHHHHHTTC
T ss_pred Cc--------------cccCCHHHHHHHHHHHHHcCC
Confidence 10 222267777777777777763
No 209
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=36.39 E-value=2.4e+02 Score=28.39 Aligned_cols=147 Identities=18% Similarity=0.202 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+.+.+...++.+.|.+.|=+=-|. +.+....+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~------------~~~~~~~e~v~avr~a~g~~~~l~vDan-~~----~~~---- 202 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGY------------PALDQDLAVVRSIRQAVGDDFGIMVDYN-QS----LDV---- 202 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------SSHHHHHHHHHHHHHHHCSSSEEEEECT-TC----SCH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC------------CCHHHHHHHHHHHHHHhCCCCEEEEECC-CC----CCH----
Confidence 55667777788888999887653332 1234578899999998887788877553 11 121
Q ss_pred CccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCHHH
Q 008423 140 SNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPAEI 217 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~~i 217 (566)
++-++.+++=-+.|.++ |-|++- .+.+ ....++++. ..+||+.+=. +.+...+.++.+. +.+-.++
T Consensus 203 -----~~a~~~~~~l~~~~i~~-iE~P~~-~~~~-~~~~~l~~~-~~iPI~~de~-~~~~~~~~~~i~~~~~d~v~ik-- 270 (359)
T 1mdl_A 203 -----PAAIKRSQALQQEGVTW-IEEPTL-QHDY-EGHQRIQSK-LNVPVQMGEN-WLGPEEMFKALSIGACRLAMPD-- 270 (359)
T ss_dssp -----HHHHHHHHHHHHHTCSC-EECCSC-TTCH-HHHHHHHHT-CSSCEEECTT-CCSHHHHHHHHHTTCCSEECCB--
T ss_pred -----HHHHHHHHHHHHhCCCe-EECCCC-hhhH-HHHHHHHHh-CCCCEEeCCC-CCCHHHHHHHHHcCCCCEEeec--
Confidence 12233333322468886 589874 2222 223444443 4689877654 5677777765432 3222221
Q ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 218 TAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 218 l~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
. .+-=|+.-+.++++...++|+
T Consensus 271 -----~-------~~~GGi~~~~~i~~~A~~~g~ 292 (359)
T 1mdl_A 271 -----A-------MKIGGVTGWIRASALAQQFGI 292 (359)
T ss_dssp -----T-------TTTTHHHHHHHHHHHHHHTTC
T ss_pred -----c-------hhhCCHHHHHHHHHHHHHcCC
Confidence 0 111267777777777777763
No 210
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=36.35 E-value=1.9e+02 Score=28.81 Aligned_cols=75 Identities=17% Similarity=0.194 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHcCCcEEEecc----------CCCHHHHHHHHHHHHHc--------CCCCcEEeeecccCCHHHHHHHhc
Q 008423 146 SDLLYLKKKVDAGADLIITQL----------FYDTDMFLKFVNDCRQI--------GITCPIVPGIMPINNYKGFLRMTG 207 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQl----------ffD~d~f~~f~~~~R~~--------Gi~vPIIpGImPI~s~~~~~r~~~ 207 (566)
++.....+++..|+|+|.-++ ..+.+.+.+.++.+|+. |-++||+.=+.|-
T Consensus 153 ~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~----------- 221 (336)
T 1f76_A 153 DDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD----------- 221 (336)
T ss_dssp HHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC-----------
T ss_pred HHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC-----------
Confidence 567777777778999986654 34666777778887764 4467877654321
Q ss_pred cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEE
Q 008423 208 FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLY 257 (566)
Q Consensus 208 l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~GiHfy 257 (566)
+ ++ +-+.++++.+.+.|+++|++.
T Consensus 222 -----~-------------~~--------~~~~~~a~~l~~~Gvd~i~vs 245 (336)
T 1f76_A 222 -----L-------------SE--------EELIQVADSLVRHNIDGVIAT 245 (336)
T ss_dssp -----C-------------CH--------HHHHHHHHHHHHTTCSEEEEC
T ss_pred -----C-------------CH--------HHHHHHHHHHHHcCCcEEEEe
Confidence 0 11 123577888889999999985
No 211
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=36.11 E-value=1.9e+02 Score=26.88 Aligned_cols=102 Identities=15% Similarity=0.154 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE-ecCCCCCCCCCCCCCCCc
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA-GYPEGHPDTIGPDGVASN 141 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA-gyPEgHpe~~~~~~~~~~ 141 (566)
.+.+.|..++++|++.|=+. ++.+.... ... ....++-+.++ .+|-.+. ++. .+|-.+++ +
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~-~~~~~~~~----~~~--~~~~~~~~~~~-~~gl~~~-~~~~~~~~~~~~----~----- 81 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELR-NDMPSGSV----TDD--LNYNQVRNLAE-KYGLEIV-TINAVYPFNQLT----E----- 81 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEE-TTSTTSST----TTT--CCHHHHHHHHH-HTTCEEE-EEEEETTTTSCC----H-----
T ss_pred CHHHHHHHHHHcCCCEEEee-cccccccc----ccc--cCHHHHHHHHH-HcCCeEE-echhhhccCCcH----H-----
Confidence 46788999999999998754 44432100 001 22444444444 5664331 222 34543321 1
Q ss_pred cchHHHHHHHHHHH----HcCCcEEEeccCCC---------HHHHHHHHHHHHHcCCC
Q 008423 142 ESYQSDLLYLKKKV----DAGADLIITQLFYD---------TDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 142 ~~~~~dl~~Lk~Kv----dAGAdFiITQlffD---------~d~f~~f~~~~R~~Gi~ 186 (566)
...+++++=+ +.||+++++-+.++ .+.+.+..+.+++.|++
T Consensus 82 ----~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 135 (272)
T 2q02_A 82 ----EVVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQ 135 (272)
T ss_dssp ----HHHHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCE
T ss_pred ----HHHHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCE
Confidence 2234444333 34899998866654 66666677777777754
No 212
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=35.95 E-value=1.6e+02 Score=30.55 Aligned_cols=156 Identities=12% Similarity=0.072 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.+=+=-|.+..+..............++.|+.||+..|+++.|.+=+| + ..+.
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan--~---~~~~---- 221 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTH--G---QFTV---- 221 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCC--S---CBCH----
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCC--C---CcCH----
Confidence 668888888888899999886522322111000000011234567889999999988788877443 1 1121
Q ss_pred CccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCC
Q 008423 140 SNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIP 214 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP 214 (566)
.+..++.++++ .|.+| |-|++- |.+.+ .++|++ ..+||..|=. +.+...+.++.+ .+.+-.|
T Consensus 222 ------~~A~~~~~~l~~~~i~~-iEeP~~~~~~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~a~d~v~~ 288 (404)
T 4e5t_A 222 ------SGAKRLARRLEAYDPLW-FEEPIPPEKPEDM----AEVARY-TSIPVATGER-LCTKYEFSRVLETGAASILQM 288 (404)
T ss_dssp ------HHHHHHHHHHGGGCCSE-EECCSCTTCHHHH----HHHHHH-CSSCEEECTT-CCHHHHHHHHHHHTCCSEECC
T ss_pred ------HHHHHHHHHHhhcCCcE-EECCCCcccHHHH----HHHHhh-CCCCEEeCCC-cCCHHHHHHHHHhCCCCEEec
Confidence 34444545553 46665 579986 44443 334443 3689887743 567777766543 2332222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
+- . +-=|+.-+.+++.-...+|+
T Consensus 289 d~-----~---------~~GGit~~~~ia~~A~~~gi 311 (404)
T 4e5t_A 289 NL-----G---------RVGGLLEAKKIAAMAECHSA 311 (404)
T ss_dssp CT-----T---------TSSCHHHHHHHHHHHHHTTC
T ss_pred Cc-----c---------ccCCHHHHHHHHHHHHHcCC
Confidence 11 1 11155666666666666664
No 213
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=35.92 E-value=2.1e+02 Score=28.25 Aligned_cols=126 Identities=14% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCceeEEeccccC--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTNM--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRS 112 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~ 112 (566)
+++....+++..+++++ |.+. +..+++..+. +|..-|++...+.+.. ...+|++..++
T Consensus 101 s~~~l~~ir~~v~lPvl----~kdfiid~~qv~~A~~----~GAD~VlLi~a~l~~~------------~l~~l~~~a~~ 160 (272)
T 3qja_A 101 SLDDLDAVRASVSIPVL----RKDFVVQPYQIHEARA----HGADMLLLIVAALEQS------------VLVSMLDRTES 160 (272)
T ss_dssp HHHHHHHHHHHCSSCEE----EESCCCSHHHHHHHHH----TTCSEEEEEGGGSCHH------------HHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEE----ECccccCHHHHHHHHH----cCCCEEEEecccCCHH------------HHHHHHHHHHH
Q ss_pred HcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC------CHHHHHHHHHHHHHcCCC
Q 008423 113 AYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY------DTDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 113 ~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff------D~d~f~~f~~~~R~~Gi~ 186 (566)
+| ..+.+-. ...+.+++=.++|||+|.+..-. |.+.+.+..+.+.. +
T Consensus 161 -lG--l~~lvev---------------------~t~ee~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~---~ 213 (272)
T 3qja_A 161 -LG--MTALVEV---------------------HTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPS---S 213 (272)
T ss_dssp -TT--CEEEEEE---------------------SSHHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCT---T
T ss_pred -CC--CcEEEEc---------------------CCHHHHHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCcc---c
Q ss_pred CcEEeeecccCCHHHHHHHhcc
Q 008423 187 CPIVPGIMPINNYKGFLRMTGF 208 (566)
Q Consensus 187 vPIIpGImPI~s~~~~~r~~~l 208 (566)
+||+. .-.|.|...+.++.+.
T Consensus 214 ~pvVa-egGI~t~edv~~l~~~ 234 (272)
T 3qja_A 214 VIRIA-ESGVRGTADLLAYAGA 234 (272)
T ss_dssp SEEEE-ESCCCSHHHHHHHHHT
T ss_pred CEEEE-ECCCCCHHHHHHHHHc
No 214
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=35.76 E-value=96 Score=29.40 Aligned_cols=65 Identities=11% Similarity=0.037 Sum_probs=42.0
Q ss_pred CCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCcee-EEeccccC----------------CHHHHHHHHHHHHHcCCC
Q 008423 15 PTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETM-MHLTCTNM----------------PVEKIDHALQTIKSNGIQ 77 (566)
Q Consensus 15 ~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i-~HLTCrd~----------------n~~~L~~~L~~a~~~GIr 77 (566)
...-+.|-+.+ +... ..-++.+.++ ..|+.+. .|....+. ..+.+++.+..|+++|++
T Consensus 34 ~~G~~~vEl~~-~~~~---~~~~~~~~l~-~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~ 108 (269)
T 3ngf_A 34 EAGFGGVEFLF-PYDF---DADVIARELK-QHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCR 108 (269)
T ss_dssp HTTCSEEECSC-CTTS---CHHHHHHHHH-HTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HcCCCEEEecC-CccC---CHHHHHHHHH-HcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCC
Confidence 34446666654 2221 2334445555 5899987 47554321 236788889999999999
Q ss_pred EEEEecC
Q 008423 78 NVLALRG 84 (566)
Q Consensus 78 NILaLrG 84 (566)
.|.+..|
T Consensus 109 ~v~~~~g 115 (269)
T 3ngf_A 109 TLHAMSG 115 (269)
T ss_dssp EEECCBC
T ss_pred EEEEccC
Confidence 9998888
No 215
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=35.60 E-value=73 Score=33.65 Aligned_cols=97 Identities=16% Similarity=0.222 Sum_probs=59.3
Q ss_pred cccCCHHHHHHHHHH-------HHHcCCCEEEEecCC---------CCC--CCCCccccCCCc-----ccHHHHHHHHHH
Q 008423 56 CTNMPVEKIDHALQT-------IKSNGIQNVLALRGD---------PPH--GQDKFVQIQGGF-----ACALDLVKHIRS 112 (566)
Q Consensus 56 Crd~n~~~L~~~L~~-------a~~~GIrNILaLrGD---------pp~--~~~~~~~~~~~F-----~~A~dLVk~Ir~ 112 (566)
.+.|+.++|++.++. |+++|.+-|=+=.|- |.. -.+.| -|.+ ....++|+.||+
T Consensus 157 pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~y---GGs~lenR~Rf~~evv~aVr~ 233 (419)
T 3l5a_A 157 VIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHY---GADSLKNRARLCLEVMRAVQE 233 (419)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTT---STTCHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCC---CCchhhhhhHHHHHHHHHHHH
Confidence 567788777766553 567999988876664 321 12222 1334 457888899988
Q ss_pred Hc----CCceeEEEEecCCCCCCC-CCCCCCCCccchHHHHHHHHHHHH--cCCcEEE
Q 008423 113 AY----GDYFGITVAGYPEGHPDT-IGPDGVASNESYQSDLLYLKKKVD--AGADLII 163 (566)
Q Consensus 113 ~~----gd~F~IGVAgyPEgHpe~-~~~~~~~~~~~~~~dl~~Lk~Kvd--AGAdFiI 163 (566)
.. |.+|.||+=..|+...+. ... .. .|..++.++++ +|+|+|-
T Consensus 234 ~v~~~~~~~f~v~vRis~~~~~~~~~G~-------~~-ed~~~la~~L~~~~Gvd~I~ 283 (419)
T 3l5a_A 234 VIDKEAPDNFILGFRATPEETRGSDLGY-------TI-DEFNQLIDWVMDVSNIQYLA 283 (419)
T ss_dssp HHHHHCCTTCEEEEEECSCEEETTEEEE-------CH-HHHHHHHHHHHHHSCCCCEE
T ss_pred HHhhhcCCCeeEEEecccccccCCCCCC-------CH-HHHHHHHHHHHhhcCCcEEE
Confidence 75 778999999888643210 000 11 34555555554 6888763
No 216
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=35.57 E-value=3.4e+02 Score=26.86 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=86.7
Q ss_pred CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCC----CCCCCccc-----cCCCcc--cHHHHHHHHHHHcC
Q 008423 47 CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPP----HGQDKFVQ-----IQGGFA--CALDLVKHIRSAYG 115 (566)
Q Consensus 47 Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp----~~~~~~~~-----~~~~F~--~A~dLVk~Ir~~~g 115 (566)
..-.++++|+-+-+.+...+.+..+.+.|++=|= | |=|. .+|..-+. -..+++ ...++|+.+|+++.
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iE-l-GiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~ 96 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALE-L-GMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNP 96 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEE-E-ECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEE-E-CCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 4567999999999999999999999999977554 3 4333 22211000 012222 34678888887643
Q ss_pred CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE-EeccCCCHHHHHHHHHHHHHcCCCCcEEeeec
Q 008423 116 DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI-ITQLFYDTDMFLKFVNDCRQIGITCPIVPGIM 194 (566)
Q Consensus 116 d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-ITQlffD~d~f~~f~~~~R~~Gi~vPIIpGIm 194 (566)
..-|.+-+|-+-- . .. -..+..++=.+||+|-+ |--+-+ +...+|.+.|++.|++ .|+=+.
T Consensus 97 -~~Pivlm~Y~n~v-~--~~----------g~~~f~~~~~~aGvdGvIipDlp~--ee~~~~~~~~~~~gl~--~I~lva 158 (271)
T 3nav_A 97 -ETPIGLLMYANLV-Y--AR----------GIDDFYQRCQKAGVDSVLIADVPT--NESQPFVAAAEKFGIQ--PIFIAP 158 (271)
T ss_dssp -TSCEEEEECHHHH-H--HT----------CHHHHHHHHHHHTCCEEEETTSCG--GGCHHHHHHHHHTTCE--EEEEEC
T ss_pred -CCCEEEEecCcHH-H--HH----------hHHHHHHHHHHCCCCEEEECCCCH--HHHHHHHHHHHHcCCe--EEEEEC
Confidence 2456566655310 0 00 01233444458999974 444444 4477899999999976 455556
Q ss_pred ccCCHHHHHHHhcc
Q 008423 195 PINNYKGFLRMTGF 208 (566)
Q Consensus 195 PI~s~~~~~r~~~l 208 (566)
|-++...+.++++.
T Consensus 159 p~t~~eri~~i~~~ 172 (271)
T 3nav_A 159 PTASDETLRAVAQL 172 (271)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 77777776666543
No 217
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=35.49 E-value=2.1e+02 Score=30.83 Aligned_cols=94 Identities=16% Similarity=0.286 Sum_probs=52.5
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchH
Q 008423 66 HALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQ 145 (566)
Q Consensus 66 ~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~ 145 (566)
+.+..+.++|++-|.+-..+ +.+....++|+.|++.+++ ..|.+...- +
T Consensus 259 era~aLveaGvd~I~Id~a~------------g~~~~v~~~i~~i~~~~~~-~~vi~g~v~-------t----------- 307 (511)
T 3usb_A 259 TRIDALVKASVDAIVLDTAH------------GHSQGVIDKVKEVRAKYPS-LNIIAGNVA-------T----------- 307 (511)
T ss_dssp HHHHHHHHTTCSEEEEECSC------------TTSHHHHHHHHHHHHHCTT-SEEEEEEEC-------S-----------
T ss_pred HHHHHHHhhccceEEecccc------------cchhhhhhHHHHHHHhCCC-ceEEeeeec-------c-----------
Confidence 34556677898866644321 1234578899999999875 344332211 1
Q ss_pred HHHHHHHHHHHcCCcEEEecc------------CC---CHHHHHHHHHHHHHcCCCCcEEe--eec
Q 008423 146 SDLLYLKKKVDAGADLIITQL------------FY---DTDMFLKFVNDCRQIGITCPIVP--GIM 194 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQl------------ff---D~d~f~~f~~~~R~~Gi~vPIIp--GIm 194 (566)
.+..++=+++|||+|+-.. -+ +.+.+.+..+.+++. .+|||+ ||.
T Consensus 308 --~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI~ 369 (511)
T 3usb_A 308 --AEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKH--GIPVIADGGIK 369 (511)
T ss_dssp --HHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTT--TCCEEEESCCC
T ss_pred --HHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhC--CCcEEEeCCCC
Confidence 1223444578999997311 11 123344444445544 489987 764
No 218
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=35.23 E-value=3.8e+02 Score=27.39 Aligned_cols=154 Identities=18% Similarity=0.169 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEec------CCCCCCCCCccccCCC------cccHHHHHHHHHHHcCCceeEEEEecCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALR------GDPPHGQDKFVQIQGG------FACALDLVKHIRSAYGDYFGITVAGYPE 127 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLr------GDpp~~~~~~~~~~~~------F~~A~dLVk~Ir~~~gd~F~IGVAgyPE 127 (566)
+.+++.+...++.+.|.+.|=+=- |+.... .......++ .....+.|+.||+..|+.+.|.+=++ .
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~-~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan-~ 227 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVF-QNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIH-S 227 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTT-SSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECT-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccc-ccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECC-C
Confidence 778888888888999998876421 332000 000001122 23467889999998988888887553 1
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 128 GHPDTIGPDGVASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 128 gHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
+ .+. .+..++.++++ .|.+ .|-|++- |.+.+.+ +++. ..+||..|=. +.+...+.+
T Consensus 228 ~----~~~----------~~ai~~~~~l~~~~i~-~iE~P~~~~~~~~~~~----l~~~-~~iPIa~dE~-~~~~~~~~~ 286 (410)
T 2gl5_A 228 L----LGT----------NSAIQFAKAIEKYRIF-LYEEPIHPLNSDNMQK----VSRS-TTIPIATGER-SYTRWGYRE 286 (410)
T ss_dssp C----SCH----------HHHHHHHHHHGGGCEE-EEECSSCSSCHHHHHH----HHHH-CSSCEEECTT-CCTTHHHHH
T ss_pred C----CCH----------HHHHHHHHHHHhcCCC-eEECCCChhhHHHHHH----HHhh-CCCCEEecCC-cCCHHHHHH
Confidence 1 122 33334444454 3554 5789885 4444433 3332 3689877654 556777766
Q ss_pred Hhc--cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 205 MTG--FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 205 ~~~--l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
+.+ .+.+-.++ + .+-=|+.-+.++++...+.|
T Consensus 287 ~i~~~~~d~v~ik-----~---------~~~GGit~~~~ia~~A~~~g 320 (410)
T 2gl5_A 287 LLEKQSIAVAQPD-----L---------CLCGGITEGKKICDYANIYD 320 (410)
T ss_dssp HHHTTCCSEECCC-----T---------TTTTHHHHHHHHHHHHHTTT
T ss_pred HHHcCCCCEEecC-----c---------cccCCHHHHHHHHHHHHHcC
Confidence 543 23222221 0 11125666677777766665
No 219
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=35.19 E-value=3.8e+02 Score=27.33 Aligned_cols=139 Identities=11% Similarity=0.023 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.|=+=-|+ +.+....+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~------------~~~~~~~e~v~avR~a~G~~~~l~vDan-~~----~~~---- 203 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH------------RDFDRDLRRLELLKTCVPAGSKVMIDPN-EA----WTS---- 203 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC------------SSHHHHHHHHHHHHTTSCTTCEEEEECT-TC----BCH----
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC------------CCHHHHHHHHHHHHHhhCCCCeEEEECC-CC----CCH----
Confidence 77888888888899999887743343 1234578899999998888788887553 11 122
Q ss_pred CccchHHHHHHHHHHHHc---CCcEEEeccCC--CHHHHHHHHHHHHHcCC-CCcEEeeecccCCHHHHHHHhc--cCCC
Q 008423 140 SNESYQSDLLYLKKKVDA---GADLIITQLFY--DTDMFLKFVNDCRQIGI-TCPIVPGIMPINNYKGFLRMTG--FCKT 211 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdA---GAdFiITQlff--D~d~f~~f~~~~R~~Gi-~vPIIpGImPI~s~~~~~r~~~--l~Gv 211 (566)
.+..++.+.++. |.+ .|=|++- |.+.+ .++++. . .+||..+=. + +...+.++.+ .+.+
T Consensus 204 ------~~a~~~~~~l~~~g~~i~-~iEqP~~~~~~~~~----~~l~~~-~~~iPIa~dE~-~-~~~~~~~~i~~~~~d~ 269 (389)
T 2oz8_A 204 ------KEALTKLVAIREAGHDLL-WVEDPILRHDHDGL----RTLRHA-VTWTQINSGEY-L-DLQGKRLLLEAHAADI 269 (389)
T ss_dssp ------HHHHHHHHHHHHTTCCCS-EEESCBCTTCHHHH----HHHHHH-CCSSEEEECTT-C-CHHHHHHHHHTTCCSE
T ss_pred ------HHHHHHHHHHHhcCCCce-EEeCCCCCcCHHHH----HHHHhh-CCCCCEEeCCC-C-CHHHHHHHHHcCCCCE
Confidence 233334444543 455 5789984 33333 334432 3 589887755 4 7777776643 2333
Q ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 212 KIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 212 ~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
-.++ =|+.-+.++++...+.|+
T Consensus 270 v~ik------------------GGit~a~~i~~~A~~~gi 291 (389)
T 2oz8_A 270 LNVH------------------GQVTDVMRIGWLAAELGI 291 (389)
T ss_dssp EEEC------------------SCHHHHHHHHHHHHHHTC
T ss_pred EEEC------------------cCHHHHHHHHHHHHHcCC
Confidence 3332 256666777777776664
No 220
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=35.04 E-value=3.6e+02 Score=27.00 Aligned_cols=188 Identities=13% Similarity=0.078 Sum_probs=111.2
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCC-CCCccccCCCcc---cHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHG-QDKFVQIQGGFA---CALDLVK 108 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~-~~~~~~~~~~F~---~A~dLVk 108 (566)
+.-+..++.+.+...++++.=+-.---+.+...+...++.++|+.-|-+=-|..|+. +.- ......+. ..++-|+
T Consensus 61 ~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~-~~~~k~l~p~~e~~~kI~ 139 (290)
T 2hjp_A 61 STHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLR-TDGRQELVRIEEFQGKIA 139 (290)
T ss_dssp HHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC--------CCBCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCcccccc-ccCCCcccCHHHHHHHHH
Confidence 445666666666666776655554312777788888888889999998766654332 210 00001122 3455566
Q ss_pred HHHHH--cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc-CCCHHHHHHHHHHHHHcCC
Q 008423 109 HIRSA--YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL-FYDTDMFLKFVNDCRQIGI 185 (566)
Q Consensus 109 ~Ir~~--~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl-ffD~d~f~~f~~~~R~~Gi 185 (566)
.+++. .++ |.|-+=.--.-. ....++-+++.+.=.+||||.|+--. .-+.+.+.+|.+.+. -
T Consensus 140 Aa~~a~~~~~-~~i~aRtda~~a-----------~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~---~ 204 (290)
T 2hjp_A 140 AATAARADRD-FVVIARVEALIA-----------GLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP---G 204 (290)
T ss_dssp HHHHHCSSTT-SEEEEEECTTTT-----------TCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC---C
T ss_pred HHHHhcccCC-cEEEEeehHhhc-----------cccHHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC---C
Confidence 66554 244 544333211100 01234779999999999999999888 888888888776652 2
Q ss_pred CCcEEeeec--ccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 186 TCPIVPGIM--PINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 186 ~vPIIpGIm--PI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
.+|++..+. |..+.+.+..+-++.-+.+|...+... +.-+.+..+.|++.|
T Consensus 205 ~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~raa--------------~~a~~~~~~~i~~~g 257 (290)
T 2hjp_A 205 KVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRAA--------------VGAVREVFARIRRDG 257 (290)
T ss_dssp SSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHHH--------------HHHHHHHHHHHHHHT
T ss_pred CCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHHH--------------HHHHHHHHHHHHHcC
Confidence 489997654 666766665422233377777665432 233345666677654
No 221
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=34.82 E-value=3.7e+02 Score=27.09 Aligned_cols=185 Identities=15% Similarity=0.137 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCC--CcccHHHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQG--GFACALDLVKHI 110 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~--~F~~A~dLVk~I 110 (566)
+.-+..+..+.+...++++.=+-.---+.+.+.+....+.++|+.-|-+=.+..|+.-.+- ..+. ..+..++-|+..
T Consensus 69 ~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~-~gk~l~~~~e~~~ri~Aa 147 (298)
T 3eoo_A 69 DDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR-PGKECVPAGEMVDRIKAA 147 (298)
T ss_dssp HHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCC-CCCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCC-CCCeecCHHHHHHHHHHH
Confidence 4455666666666777777766653227777788888888999999986655554321110 0011 122344445444
Q ss_pred HHH-cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcE
Q 008423 111 RSA-YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPI 189 (566)
Q Consensus 111 r~~-~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPI 189 (566)
++. .+..|.|-+=.--.. ...+++-++|.+.=.+||||.|.---.-|.+.+.+|.+.+. +|+
T Consensus 148 ~~A~~~~~~~I~ARTDa~~------------~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-----~Pl 210 (298)
T 3eoo_A 148 VDARTDETFVIMARTDAAA------------AEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-----VPI 210 (298)
T ss_dssp HHHCSSTTSEEEEEECTHH------------HHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-----SCB
T ss_pred HHhccCCCeEEEEeehhhh------------hcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-----CCe
Confidence 443 234566644432111 11344679999999999999887777779999999888763 787
Q ss_pred Eeee-----cccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 190 VPGI-----MPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 190 IpGI-----mPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
++-+ .|..|.+.+..+ -+.-+.+|...+... +.-+.+..+.|++.|
T Consensus 211 ~~n~~~~g~tp~~~~~eL~~l-Gv~~v~~~~~~~raa--------------~~a~~~~~~~i~~~g 261 (298)
T 3eoo_A 211 LANLTEFGSTPLFTLDELKGA-NVDIALYCCGAYRAM--------------NKAALNFYETVRRDG 261 (298)
T ss_dssp EEECCTTSSSCCCCHHHHHHT-TCCEEEECSHHHHHH--------------HHHHHHHHHHHHHHS
T ss_pred EEEeccCCCCCCCCHHHHHHc-CCeEEEEchHHHHHH--------------HHHHHHHHHHHHHcC
Confidence 6543 366666666542 233355666654432 233445666676654
No 222
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=34.37 E-value=1.5e+02 Score=30.84 Aligned_cols=155 Identities=11% Similarity=0.072 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecC--CCCCCCCCccc-------cC-----CCcccHHHHHHHHHHHcCCceeEEEEec
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRG--DPPHGQDKFVQ-------IQ-----GGFACALDLVKHIRSAYGDYFGITVAGY 125 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrG--Dpp~~~~~~~~-------~~-----~~F~~A~dLVk~Ir~~~gd~F~IGVAgy 125 (566)
+.+++.+..+.+.+.|.+.+=+=-+ |.+. ...|.+ .. ..+...++.|+.||+..|+.+.|.+=+|
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~-~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 143 DLDGVKRTAEEARERQFRAIKTNIFIHDDGP-LHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECCEECSSSS-CEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccccccccc-ccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 6778888888888999998754210 1000 000100 00 0133457889999999988888887543
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHH-HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 126 PEGHPDTIGPDGVASNESYQSDLLYLKKKV-DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 126 PEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
- ..+. .+..++.+++ +.|.+|| -|++.|.+.+.+ ++++ ..+||..|=. +.+...+.+
T Consensus 222 ~-----~~~~----------~~A~~~~~~L~~~~i~~i-E~P~~d~~~~~~----l~~~-~~iPIa~dE~-~~~~~~~~~ 279 (409)
T 3go2_A 222 F-----NAKP----------EGYLKILRELADFDLFWV-EIDSYSPQGLAY----VRNH-SPHPISSCET-LFGIREFKP 279 (409)
T ss_dssp T-----CSCH----------HHHHHHHHHTTTSCCSEE-ECCCSCHHHHHH----HHHT-CSSCEEECTT-CCHHHHHHH
T ss_pred C-----CCCH----------HHHHHHHHHHhhcCCeEE-EeCcCCHHHHHH----HHhh-CCCCEEeCCC-cCCHHHHHH
Confidence 1 1122 3333444444 3466664 599988777544 4433 4689887744 556666665
Q ss_pred Hhcc--CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 205 MTGF--CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 205 ~~~l--~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+.+. +.+-.| |. .+ =|+.-+.++++...+.|++
T Consensus 280 ~i~~~~~d~v~~------------k~--~~-GGit~~~~ia~~A~~~gi~ 314 (409)
T 3go2_A 280 FFDANAVDVAIV------------DT--IW-NGVWQSMKIAAFADAHDIN 314 (409)
T ss_dssp HHHTTCCSEEEE------------CH--HH-HCHHHHHHHHHHHHHTTCE
T ss_pred HHHhCCCCEEEe------------CC--CC-CCHHHHHHHHHHHHHcCCE
Confidence 4432 222222 11 34 5788888888888777643
No 223
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=34.36 E-value=2.6e+02 Score=28.54 Aligned_cols=145 Identities=12% Similarity=0.010 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|+. .... .+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~------------~~~~-~e~v~avr~a~g~d~~l~vDan-~~----~~~--- 221 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVA------------DDGP-AAEIANLRQVLGPQAKIAADMH-WN----QTP--- 221 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGC------------TTCH-HHHHHHHHHHHCTTSEEEEECC-SC----SCH---
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCC------------ChHH-HHHHHHHHHHhCCCCEEEEECC-CC----CCH---
Confidence 3677888888888899988876543431 2346 8899999998888888887543 11 122
Q ss_pred CCccchHHHHHHHHHHH-HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCH
Q 008423 139 ASNESYQSDLLYLKKKV-DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPA 215 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kv-dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~ 215 (566)
.+..++.+++ +.|.+| |-|++- .+.+ ....++++. ..+||+.+=. +.+...+.++.+. +.+-.+
T Consensus 222 -------~~a~~~~~~l~~~~i~~-iEqP~~-~~d~-~~~~~l~~~-~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~i- 288 (388)
T 2nql_A 222 -------ERALELIAEMQPFDPWF-AEAPVW-TEDI-AGLEKVSKN-TDVPIAVGEE-WRTHWDMRARIERCRIAIVQP- 288 (388)
T ss_dssp -------HHHHHHHHHHGGGCCSC-EECCSC-TTCH-HHHHHHHTS-CCSCEEECTT-CCSHHHHHHHHTTSCCSEECC-
T ss_pred -------HHHHHHHHHHhhcCCCE-EECCCC-hhhH-HHHHHHHhh-CCCCEEEeCC-cCCHHHHHHHHHcCCCCEEEe-
Confidence 2333333344 357776 589875 2222 233444543 4689877654 6677777765532 222222
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
| -.+ =|+.-+.++++...++|+
T Consensus 289 ---------k----~~~-GGit~~~~i~~~A~~~g~ 310 (388)
T 2nql_A 289 ---------E----MGH-KGITNFIRIGALAAEHGI 310 (388)
T ss_dssp ---------C----HHH-HCHHHHHHHHHHHHHHTC
T ss_pred ---------c----CCC-CCHHHHHHHHHHHHHcCC
Confidence 1 134 577778888887777764
No 224
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=33.60 E-value=1.6e+02 Score=28.08 Aligned_cols=105 Identities=15% Similarity=0.245 Sum_probs=62.0
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE-ecCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA-GYPE 127 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA-gyPE 127 (566)
..+|.+.|-| ...+.+.++.+.+.|++-+- ++= .++. +. ..+....++++.||+...-.+.+-.- ..|+
T Consensus 6 ~i~psila~D--~~~l~~~i~~~~~~Gad~ih-ldi---~DG~-fv---p~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~ 75 (230)
T 1tqj_A 6 VVAPSILSAD--FSRLGEEIKAVDEAGADWIH-VDV---MDGR-FV---PNITIGPLIVDAIRPLTKKTLDVHLMIVEPE 75 (230)
T ss_dssp EEEEBGGGSC--GGGHHHHHHHHHHTTCSEEE-EEE---EBSS-SS---SCBCBCHHHHHHHGGGCCSEEEEEEESSSGG
T ss_pred EEEEEeeecC--HhHHHHHHHHHHHcCCCEEE-EEE---EecC-CC---cchhhhHHHHHHHHhhcCCcEEEEEEccCHH
Confidence 4678888887 55677888889999988652 111 1111 11 12344558889998755322332222 3332
Q ss_pred CCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC--CCHHHHHHHHHHHHHcCC
Q 008423 128 GHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF--YDTDMFLKFVNDCRQIGI 185 (566)
Q Consensus 128 gHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf--fD~d~f~~f~~~~R~~Gi 185 (566)
. +++.=.++|||.++-... -. +...+.++.+++.|+
T Consensus 76 ~---------------------~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~ 113 (230)
T 1tqj_A 76 K---------------------YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGK 113 (230)
T ss_dssp G---------------------THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTC
T ss_pred H---------------------HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCC
Confidence 2 233334689998765544 22 356688899998884
No 225
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=33.56 E-value=70 Score=30.17 Aligned_cols=73 Identities=15% Similarity=0.219 Sum_probs=51.4
Q ss_pred hhhccCCCcCEEEecCCCCCCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 10 WTAWWPTTRHSATSRWGAGGSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 10 ~~~~~~~~p~fVsVTwgagG~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
.+-++.+.|. |.|- .|++++. ..+=+....+++|++.-.++..-.++.+.+.+.+..+.+.|++=|.+..|-.
T Consensus 5 ~~~~~~m~~~-V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~a 78 (174)
T 3kuu_A 5 LNSAYAAGVK-IAIV---MGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGA 78 (174)
T ss_dssp -CCSSCCCCC-EEEE---ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESS
T ss_pred ccccccCCCc-EEEE---ECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChh
Confidence 3445555554 3332 2344443 3334444444799999999999999999999999999999999888887764
No 226
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=33.48 E-value=3.5e+02 Score=27.48 Aligned_cols=146 Identities=15% Similarity=0.138 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|. ......+.|+.||+..| .+.|.+=++ .+ .+.
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-------------~~~~~~e~v~avr~a~g-d~~l~vD~n-~~----~~~--- 203 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-------------GEKLDLEITAAVRGEIG-DARLRLDAN-EG----WSV--- 203 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-------------CHHHHHHHHHHHHTTST-TCEEEEECT-TC----CCH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-------------CHHHHHHHHHHHHHHcC-CcEEEEecC-CC----CCH---
Confidence 467778888888889998887653332 23457889999999888 677776432 11 121
Q ss_pred CCccchHHHHHHHHHHH-HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCH
Q 008423 139 ASNESYQSDLLYLKKKV-DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPA 215 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kv-dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~ 215 (566)
.+..++.+.+ +.|.+| |.|++- .+.+ ....++++. ..+||+.+=. +.+...+.++.+. +.+-.++
T Consensus 204 -------~~a~~~~~~l~~~~i~~-iEqP~~-~~~~-~~~~~l~~~-~~iPI~~de~-i~~~~~~~~~i~~~~~d~v~ik 271 (384)
T 2pgw_A 204 -------HDAINMCRKLEKYDIEF-IEQPTV-SWSI-PAMAHVREK-VGIPIVADQA-AFTLYDVYEICRQRAADMICIG 271 (384)
T ss_dssp -------HHHHHHHHHHGGGCCSE-EECCSC-TTCH-HHHHHHHHH-CSSCEEESTT-CCSHHHHHHHHHTTCCSEEEEC
T ss_pred -------HHHHHHHHHHHhcCCCE-EeCCCC-hhhH-HHHHHHHhh-CCCCEEEeCC-cCCHHHHHHHHHcCCCCEEEEc
Confidence 2333333344 357776 689974 2222 223334433 3689877654 6677777765432 2222221
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
- .+-=|+.-+.++++...+.|++
T Consensus 272 ~--------------~~~GGit~~~~i~~~A~~~g~~ 294 (384)
T 2pgw_A 272 P--------------REIGGIQPMMKAAAVAEAAGLK 294 (384)
T ss_dssp H--------------HHHTSHHHHHHHHHHHHHTTCC
T ss_pred c--------------hhhCCHHHHHHHHHHHHHCCCe
Confidence 0 1222677777888777777753
No 227
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=33.44 E-value=1.3e+02 Score=29.13 Aligned_cols=106 Identities=19% Similarity=0.293 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHH-------H-HHHHHHHHcCCceeEEEEecCCCCCCCCCCC
Q 008423 65 DHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACAL-------D-LVKHIRSAYGDYFGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 65 ~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~-------d-LVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~ 136 (566)
++.|..+.+.||...++...+|...+. ..-..+. + +.+. .+.+++.| +|+++.|-.++
T Consensus 41 ~~~l~~m~~~GV~~~v~~~~~p~~~~~------~d~~~~~~~~~~~n~~~~~~-~~~~p~r~-~~~~~v~p~~~------ 106 (327)
T 2dvt_A 41 DTRLKLMDAHGIETMILSLNAPAVQAI------PDRRKAIEIARRANDVLAEE-CAKRPDRF-LAFAALPLQDP------ 106 (327)
T ss_dssp SHHHHHHHHTTEEEEEEEECSSGGGGC------CCHHHHHHHHHHHHHHHHHH-HHHCTTTE-EEEECCCTTSH------
T ss_pred HHHHHHhhhcCCcEEEEeCCCCccccc------CChHHHHHHHHHHHHHHHHH-HhhCCCce-EEEeecCcCCH------
Confidence 677888899999998876444321100 0111111 2 2222 34577655 56666542221
Q ss_pred CCCCccchHHHHHHHHHHHH-cCCcEEEecc-----------CCCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 137 GVASNESYQSDLLYLKKKVD-AGADLIITQL-----------FYDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQl-----------ffD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
+..++.|++-++ .|+.-|-..+ .++-+.|..+++.|.+.|+.+=|.+|
T Consensus 107 --------~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 166 (327)
T 2dvt_A 107 --------DAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPR 166 (327)
T ss_dssp --------HHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECC
T ss_pred --------HHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCC
Confidence 122344444333 4777654332 23456789999999999854434444
No 228
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=33.21 E-value=3.7e+02 Score=26.71 Aligned_cols=126 Identities=18% Similarity=0.149 Sum_probs=69.2
Q ss_pred HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEE-EEecCCCCCCCCCccccCCCcccHHHHHHHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNV-LALRGDPPHGQDKFVQIQGGFACALDLVKHIRSA 113 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNI-LaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~ 113 (566)
...+-..+-+ +|.++++= |....+..++..++......|..++ |+.||-..-.. + .....+ ...+..+++.
T Consensus 134 n~~ll~~~a~-~~kPV~lk-~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~-y---~~~~vd--l~~i~~lk~~ 205 (276)
T 1vs1_A 134 NFPLLREVGR-SGKPVLLK-RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEP-S---TRFTLD--VAAVAVLKEA 205 (276)
T ss_dssp CHHHHHHHHH-HTCCEEEE-CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCC-S---SSSBCB--HHHHHHHHHH
T ss_pred CHHHHHHHHc-cCCeEEEc-CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCC-c---CcchhC--HHHHHHHHHH
Confidence 3333344443 58777754 4444588999999999999998665 55578632111 0 112222 2224446665
Q ss_pred cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCc--EEEecc-----------CCCHHHHHHHHHHH
Q 008423 114 YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGAD--LIITQL-----------FYDTDMFLKFVNDC 180 (566)
Q Consensus 114 ~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAd--FiITQl-----------ffD~d~f~~f~~~~ 180 (566)
++- - |.+||. |.... .+. -..--..-+.+||+ +|=+-+ -.+++.|.++++.+
T Consensus 206 ~~l--p--Vi~dss-H~~g~--------~~~--~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i 270 (276)
T 1vs1_A 206 THL--P--VIVDPS-HPAGR--------RSL--VPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGEL 270 (276)
T ss_dssp BSS--C--EEECCH-HHHCS--------GGG--HHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred hCC--C--EEEeCC-CCCCc--------cch--HHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHH
Confidence 542 2 445552 31110 011 12223444789999 443332 12788899999998
Q ss_pred HHc
Q 008423 181 RQI 183 (566)
Q Consensus 181 R~~ 183 (566)
|+.
T Consensus 271 ~~~ 273 (276)
T 1vs1_A 271 RWH 273 (276)
T ss_dssp HHT
T ss_pred HHH
Confidence 864
No 229
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=33.11 E-value=1.9e+02 Score=24.05 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 102 CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 102 ~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
.+.++++.||+.+..--.|-+++++. .....+-+++||+-+++-++ +.+.+.+-++.+-
T Consensus 80 ~g~~~~~~l~~~~~~~~ii~ls~~~~--------------------~~~~~~~~~~g~~~~l~Kp~-~~~~l~~~i~~~~ 138 (150)
T 4e7p_A 80 TGLEVLEWIRSEKLETKVVVVTTFKR--------------------AGYFERAVKAGVDAYVLKER-SIADLMQTLHTVL 138 (150)
T ss_dssp CHHHHHHHHHHTTCSCEEEEEESCCC--------------------HHHHHHHHHTTCSEEEETTS-CHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCeEEEEeCCCC--------------------HHHHHHHHHCCCcEEEecCC-CHHHHHHHHHHHH
Confidence 37899999998765433444444321 23344556799999999887 7777777777665
Q ss_pred Hc
Q 008423 182 QI 183 (566)
Q Consensus 182 ~~ 183 (566)
+.
T Consensus 139 ~~ 140 (150)
T 4e7p_A 139 EG 140 (150)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 230
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=33.05 E-value=1.2e+02 Score=30.00 Aligned_cols=37 Identities=11% Similarity=0.176 Sum_probs=25.8
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
++=.||+..... ..+++.|.+|+++||..++++..|+
T Consensus 5 D~H~HL~~~~~~-~d~~~vl~~a~~~gV~~~v~~g~~~ 41 (287)
T 3rcm_A 5 DIGVNLTNSSFH-DQQAAIVERALEAGVTQMLLTGTSL 41 (287)
T ss_dssp EEEECTTCGGGT-TCHHHHHHHHHHTTEEEEEECCCSH
T ss_pred EEeecCCchhcc-cCHHHHHHHHHHcCCeEEEEecCCH
Confidence 344577654332 3577889999999999999875443
No 231
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=32.95 E-value=4e+02 Score=26.95 Aligned_cols=188 Identities=12% Similarity=0.039 Sum_probs=103.9
Q ss_pred HHHHHHHHHhhc--CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-cCCCcccHHHHHHHHH
Q 008423 35 TLDIANRMQNTI--CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ-IQGGFACALDLVKHIR 111 (566)
Q Consensus 35 Sl~la~~lq~~~--Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~-~~~~F~~A~dLVk~Ir 111 (566)
-+..++.+.+.. .++++.=+-.---+.+.+.+....+.++|+.-|-+=-+..|+.-.+-.. .--..+..++-|+..+
T Consensus 74 m~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~ 153 (307)
T 3lye_A 74 MRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAV 153 (307)
T ss_dssp HHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHH
Confidence 334444444322 3666666655322677777888888899999988555544432111000 0011223444444444
Q ss_pred H---HcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCc
Q 008423 112 S---AYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCP 188 (566)
Q Consensus 112 ~---~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vP 188 (566)
+ ..+..|.|=+=.--.. ...+++-++|++.=.+||||.|.---.-+.+.+.++.+.+. .+|
T Consensus 154 ~A~~~~~~d~~I~ARTDa~~------------~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~----~~P 217 (307)
T 3lye_A 154 ATKRRLRSDFVLIARTDALQ------------SLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAALA----PWP 217 (307)
T ss_dssp HHHHHTTCCCEEEEEECCHH------------HHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT----TSC
T ss_pred HHHHhcCCCeEEEEechhhh------------ccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc----CCc
Confidence 3 2355576644432110 01234779999999999999888878889999999888875 367
Q ss_pred EEeee-----cccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe
Q 008423 189 IVPGI-----MPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKT 253 (566)
Q Consensus 189 IIpGI-----mPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~G 253 (566)
++.-+ .|..+.+.+..+ -+.-+..|..++.. .+.-+.+..+.|++.|..+
T Consensus 218 v~~n~~~~g~~p~~t~~eL~~l-Gv~~v~~~~~~~ra--------------a~~a~~~~~~~l~~~g~~~ 272 (307)
T 3lye_A 218 LLLNSVENGHSPLITVEEAKAM-GFRIMIFSFATLAP--------------AYAAIRETLVRLRDHGVVG 272 (307)
T ss_dssp BEEEEETTSSSCCCCHHHHHHH-TCSEEEEETTTHHH--------------HHHHHHHHHHHHHHHSCCC
T ss_pred eeEEeecCCCCCCCCHHHHHHc-CCeEEEEChHHHHH--------------HHHHHHHHHHHHHHhCCCC
Confidence 65533 455566666542 12223344333221 2233456667777766433
No 232
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=32.90 E-value=3.8e+02 Score=27.14 Aligned_cols=47 Identities=11% Similarity=0.181 Sum_probs=32.8
Q ss_pred CCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEE
Q 008423 27 AGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNV 79 (566)
Q Consensus 27 agG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNI 79 (566)
.||..+++.++..+.+++...+|+|--.--.. + ...+.+.++|+.-|
T Consensus 48 ~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ-----~-~EAqilea~GaD~I 94 (291)
T 3o07_A 48 SGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGH-----F-VEAQIIEALEVDYI 94 (291)
T ss_dssp TTCCCCCCCHHHHHHHHTTCSSCEEEEEETTC-----H-HHHHHHHHTTCSEE
T ss_pred cCCccccCCHHHHHHHHHhCCCCeEEEEecCc-----H-HHHHHHHHcCCCEE
Confidence 67888889999999999988888876433322 2 22233456999966
No 233
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=32.77 E-value=2.8e+02 Score=25.14 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=62.8
Q ss_pred eccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCC-ceeEEEEecCCCCCCC
Q 008423 54 LTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGD-YFGITVAGYPEGHPDT 132 (566)
Q Consensus 54 LTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd-~F~IGVAgyPEgHpe~ 132 (566)
+.+...+.++..+.++.+.+ |++-|=+ |++-. ...+.++|+.+|+.+++ .+.++.-.| . .
T Consensus 5 ~a~d~~~~~~~~~~~~~~~~-~v~~iev--~~~~~-----------~~~g~~~i~~l~~~~~~~~i~~~l~~~---d--i 65 (207)
T 3ajx_A 5 VAIDLLSTEAALELAGKVAE-YVDIIEL--GTPLI-----------KAEGLSVITAVKKAHPDKIVFADMKTM---D--A 65 (207)
T ss_dssp EEECCSCHHHHHHHHHHHGG-GCSEEEE--CHHHH-----------HHHCTHHHHHHHHHSTTSEEEEEEEEC---S--C
T ss_pred EEeCCCCHHHHHHHHHHhhc-cCCEEEE--CcHHH-----------HhhCHHHHHHHHHhCCCCeEEEEEEec---C--c
Confidence 45555677777777777776 7776443 44320 12345678899988732 344433333 1 0
Q ss_pred CCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCC
Q 008423 133 IGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 133 ~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~ 186 (566)
+ .. +.+.=.++|||+++..+.-+.+...++++.+++.|+.
T Consensus 66 --~----------~~--~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~ 105 (207)
T 3ajx_A 66 --G----------EL--EADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKG 105 (207)
T ss_dssp --H----------HH--HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred --c----------HH--HHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCc
Confidence 0 11 2233346899999988888878888899999988843
No 234
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=32.28 E-value=19 Score=34.19 Aligned_cols=114 Identities=16% Similarity=0.238 Sum_probs=56.7
Q ss_pred ceeEEeccccCC--HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecC
Q 008423 49 ETMMHLTCTNMP--VEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYP 126 (566)
Q Consensus 49 e~i~HLTCrd~n--~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyP 126 (566)
++=.|+...... ...+++.|..+.++||+.++++..++ ..+..+. + +.+++++ +..+++.+|
T Consensus 5 D~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~~-----------~~~~~~~---~-~~~~~p~-~~~~~g~hP 68 (265)
T 1yix_A 5 DSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL-----------PSYLHMR---D-LVGERDN-VVFSCGVHP 68 (265)
T ss_dssp EEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSSH-----------HHHHHHH---H-HHCSCTT-EEEEECCCT
T ss_pred EEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCCH-----------HHHHHHH---H-HHHHCCC-eEEEEEeCC
Confidence 334455543321 23467788889999999998764221 1112222 2 2345664 545555566
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHH--HH-c---CCcEEEe-cc-CCCHHHHHHHHHHHHHcCCCCcEE
Q 008423 127 EGHPDTIGPDGVASNESYQSDLLYLKKK--VD-A---GADLIIT-QL-FYDTDMFLKFVNDCRQIGITCPIV 190 (566)
Q Consensus 127 EgHpe~~~~~~~~~~~~~~~dl~~Lk~K--vd-A---GAdFiIT-Ql-ffD~d~f~~f~~~~R~~Gi~vPII 190 (566)
...++..+ ..+++++.++ +. . |-++... +. -.+.+.|...++.+++.| +||+
T Consensus 69 ~~~~~~~~----------~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~--~pv~ 128 (265)
T 1yix_A 69 LNQNDPYD----------VEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELN--KPVI 128 (265)
T ss_dssp TCCSSCCC----------HHHHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHT--CCEE
T ss_pred Ccccccch----------HHHHHHHhccCCeEEEEccccCCCcCCCChHHHHHHHHHHHHHHHHhC--CCEE
Confidence 54322111 1345544332 11 1 3333211 11 123456778888888887 5654
No 235
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=32.26 E-value=1e+02 Score=29.07 Aligned_cols=36 Identities=14% Similarity=0.265 Sum_probs=24.2
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGD 85 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGD 85 (566)
++=.|+.....+ ...++.|..+.++||+.++++..+
T Consensus 7 D~H~Hl~~~~~~-~~~~~~l~~~~~~Gv~~~v~~~~~ 42 (264)
T 1xwy_A 7 DIGVNLTSSQFA-KDRDDVVACAFDAGVNGLLITGTN 42 (264)
T ss_dssp EEEECTTSGGGT-TTHHHHHHHHHHTTCCEEEECCCS
T ss_pred EEeeCCCChhhc-cCHHHHHHHHHHCCCCEEEEeCCC
Confidence 344566544332 246778888999999999987543
No 236
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=32.12 E-value=1.9e+02 Score=29.85 Aligned_cols=125 Identities=12% Similarity=0.193 Sum_probs=66.6
Q ss_pred HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe-cCCCCCCCCCccccCCCcccHHHHHHHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL-RGDPPHGQDKFVQIQGGFACALDLVKHIRSA 113 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL-rGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~ 113 (566)
...+-..+-+ +|.++++= +-...+.+++..+++...+.|..++.+. ||-..-... .....+. ..|..+++.
T Consensus 202 n~~LL~~va~-~~kPVilk-~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~----~~~~vdl--~ai~~lk~~ 273 (350)
T 1vr6_A 202 NFRLLSKAGS-YNKPVLLK-RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKA----TRNTLDI--SAVPIIRKE 273 (350)
T ss_dssp CHHHHHHHHT-TCSCEEEE-CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCS----SSSBCCT--THHHHHHHH
T ss_pred CHHHHHHHHc-cCCcEEEc-CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCc----ChhhhhH--HHHHHHHHh
Confidence 3333333433 67776653 3334478999999999999999776554 886321110 1222232 223446666
Q ss_pred cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCc--EEEecc-----------CCCHHHHHHHHHHH
Q 008423 114 YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGAD--LIITQL-----------FYDTDMFLKFVNDC 180 (566)
Q Consensus 114 ~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAd--FiITQl-----------ffD~d~f~~f~~~~ 180 (566)
++ .- |.+||. |.... .+. -..--..-+.+||+ +|=+-+ --+++.|.++++.+
T Consensus 274 ~~--lp--Vi~dss-Hs~G~--------~~~--v~~~a~AAvA~GA~Gl~IE~H~~pd~al~D~~~sL~p~e~~~lv~~i 338 (350)
T 1vr6_A 274 SH--LP--ILVDPS-HSGGR--------RDL--VIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEM 338 (350)
T ss_dssp BS--SC--EEECHH-HHHCS--------GGG--HHHHHHHHHHHTCSEEEEEBCSCGGGCSSCGGGCBCHHHHHHHHHHH
T ss_pred hC--CC--EEEeCC-CCCcc--------cch--HHHHHHHHHHhCCCEEEEEecCCcccCCCchhhcCCHHHHHHHHHHH
Confidence 54 22 445442 21110 011 12223344789999 443322 12778888888888
Q ss_pred HH
Q 008423 181 RQ 182 (566)
Q Consensus 181 R~ 182 (566)
|+
T Consensus 339 r~ 340 (350)
T 1vr6_A 339 KK 340 (350)
T ss_dssp HH
T ss_pred HH
Confidence 85
No 237
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=31.91 E-value=2.5e+02 Score=29.25 Aligned_cols=150 Identities=13% Similarity=0.100 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|-.|..+ .......++.|+.+|+..|+.+.|.+=+|- + .+.
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg------~~~~~~die~v~avReavG~d~~L~vDaN~-~----~~~--- 243 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDG------MPGMRENLKRVEAVREVIGYDNDLMLECYM-G----WNL--- 243 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGH------HHHHHHHHHHHHHHHHHHCSSSEEEEECTT-C----SCH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcccc------cchHHHHHHHHHHHHHHcCCCCeEEEECCC-C----CCH---
Confidence 46788888888899999998764333221100 012345778899999999888888875541 1 122
Q ss_pred CCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCC
Q 008423 139 ASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~V 213 (566)
.+..++.++++ .|.+| |=|++- |.+.+ .++|+. ..+||..|=. +.+...+.++.+. +.+-.
T Consensus 244 -------~~Ai~~~~~Le~~~i~~-iEeP~~~~d~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~li~~~a~D~v~ 309 (412)
T 3stp_A 244 -------DYAKRMLPKLAPYEPRW-LEEPVIADDVAGY----AELNAM-NIVPISGGEH-EFSVIGCAELINRKAVSVLQ 309 (412)
T ss_dssp -------HHHHHHHHHHGGGCCSE-EECCSCTTCHHHH----HHHHHT-CSSCEEECTT-CCSHHHHHHHHHTTCCSEEC
T ss_pred -------HHHHHHHHHHHhcCCCE-EECCCCcccHHHH----HHHHhC-CCCCEEeCCC-CCCHHHHHHHHHcCCCCEEe
Confidence 33444444553 46665 579986 44443 445543 4689887743 5677777765432 33333
Q ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 214 PAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 214 P~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
|+- .+-=|+.-+.+++....+.|
T Consensus 310 ik~--------------~~~GGit~a~kia~~A~a~g 332 (412)
T 3stp_A 310 YDT--------------NRVGGITAAQKINAIAEAAQ 332 (412)
T ss_dssp CCH--------------HHHTHHHHHHHHHHHHHHHT
T ss_pred cCh--------------hhcCCHHHHHHHHHHHHHcC
Confidence 311 22336777777777776665
No 238
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=31.76 E-value=2.4e+02 Score=27.53 Aligned_cols=115 Identities=12% Similarity=0.085 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+-..|.+.+..+.++|++-+-+=-.|-. + ...+....++|+.||+..++ ..+.|=--. .++
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~-----F---Vpnit~G~~~v~~lr~~~p~-~~ldvHLmv------~~p--- 98 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNH-----Y---VPNLTFGPMVLKALRDYGIT-AGMDVHLMV------KPV--- 98 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSS-----S---SSCBCCCHHHHHHHHHHTCC-SCEEEEEEC------SSC---
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCC-----c---CcchhcCHHHHHHHHHhCCC-CeEEEEEee------CCH---
Confidence 35566778999999999886554334421 1 12345678899999987633 223332222 122
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHH
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFL 203 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~ 203 (566)
..+++.=.+||||++.-..--. +...+.++.+|+.|+. +-.-|-|-++...+.
T Consensus 99 ---------~~~i~~~~~aGAd~itvH~Ea~-~~~~~~i~~ir~~G~k--~Gvalnp~Tp~e~l~ 151 (246)
T 3inp_A 99 ---------DALIESFAKAGATSIVFHPEAS-EHIDRSLQLIKSFGIQ--AGLALNPATGIDCLK 151 (246)
T ss_dssp ---------HHHHHHHHHHTCSEEEECGGGC-SCHHHHHHHHHTTTSE--EEEEECTTCCSGGGT
T ss_pred ---------HHHHHHHHHcCCCEEEEccccc-hhHHHHHHHHHHcCCe--EEEEecCCCCHHHHH
Confidence 1234444579999887765443 3567889999999854 222344555555443
No 239
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=31.55 E-value=2.1e+02 Score=23.33 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=40.1
Q ss_pred cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 102 CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 102 ~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
.+.++++.||+.+..--.|-+.++.+ .....+-+++||+-+++-+ ++.+.+..-++++.
T Consensus 66 ~g~~~~~~l~~~~~~~~ii~~s~~~~--------------------~~~~~~~~~~ga~~~l~KP-~~~~~l~~~i~~~~ 124 (136)
T 3kto_A 66 SGIELLETLVKRGFHLPTIVMASSSD--------------------IPTAVRAMRASAADFIEKP-FIEHVLVHDVQQII 124 (136)
T ss_dssp HHHHHHHHHHHTTCCCCEEEEESSCC--------------------HHHHHHHHHTTCSEEEESS-BCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCCCCCCEEEEEcCCC--------------------HHHHHHHHHcChHHheeCC-CCHHHHHHHHHHHH
Confidence 37889999998764323344444321 2233455689999999998 67777777777665
Q ss_pred Hc
Q 008423 182 QI 183 (566)
Q Consensus 182 ~~ 183 (566)
..
T Consensus 125 ~~ 126 (136)
T 3kto_A 125 NG 126 (136)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 240
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=31.39 E-value=3.8e+02 Score=27.86 Aligned_cols=156 Identities=11% Similarity=0.078 Sum_probs=92.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|+ ......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~-------------~~~~d~e~v~avR~a~G~d~~l~vDan-~~----~~~--- 255 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGA-------------NVQDDIRRCRLARAAIGPDIAMAVDAN-QR----WDV--- 255 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCS-------------CHHHHHHHHHHHHHHHCSSSEEEEECT-TC----CCH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC-------------CHHHHHHHHHHHHHhcCCCCeEEEECC-CC----CCH---
Confidence 477888888888899999888643332 134568889999998888888877653 11 122
Q ss_pred CCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~V 213 (566)
.+..++.++++ .|.+| |=|++- |.+.+.++.+.+ + .+||..|=. +.+...+.++.+ .+.+-.
T Consensus 256 -------~~a~~~~~~l~~~~i~~-iEqP~~~~d~~~~~~l~~~~---~-~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ 322 (441)
T 2hxt_A 256 -------GPAIDWMRQLAEFDIAW-IEEPTSPDDVLGHAAIRQGI---T-PVPVSTGEH-TQNRVVFKQLLQAGAVDLIQ 322 (441)
T ss_dssp -------HHHHHHHHTTGGGCCSC-EECCSCTTCHHHHHHHHHHH---T-TSCEEECTT-CCSHHHHHHHHHHTCCSEEC
T ss_pred -------HHHHHHHHHHHhcCCCe-eeCCCCHHHHHHHHHHHhhC---C-CCCEEEeCC-cCCHHHHHHHHHcCCCCEEE
Confidence 33333444454 57775 689876 444443332222 2 489888765 888888877643 232222
Q ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEcCCch
Q 008423 214 PAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKT-LHLYTLNME 262 (566)
Q Consensus 214 P~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~G-iHfyTlN~e 262 (566)
++ +. +-=|+.-+.+++.-..+.|++= .|-..++..
T Consensus 323 ik-----~~---------~~GGite~~~ia~~A~~~g~~~~~h~~~~~~~ 358 (441)
T 2hxt_A 323 ID-----AA---------RVGGVNENLAILLLAAKFGVRVFPHAGGVGLC 358 (441)
T ss_dssp CC-----TT---------TSSHHHHHHHHHHHHHHTTCEECCCCCSTTHH
T ss_pred eC-----cc---------eeCCHHHHHHHHHHHHHcCCeEEEecChHHHH
Confidence 21 01 1116666777777777777431 355555544
No 241
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=31.37 E-value=4.3e+02 Score=26.83 Aligned_cols=113 Identities=18% Similarity=0.253 Sum_probs=67.5
Q ss_pred ccccC---CHHHHHHHHHHHHHcCCCEEEEecCCCCCC--------------------CC-CccccCCCcccHHH----H
Q 008423 55 TCTNM---PVEKIDHALQTIKSNGIQNVLALRGDPPHG--------------------QD-KFVQIQGGFACALD----L 106 (566)
Q Consensus 55 TCrd~---n~~~L~~~L~~a~~~GIrNILaLrGDpp~~--------------------~~-~~~~~~~~F~~A~d----L 106 (566)
|||.. +++..+..++.++++||+.++++.||-+-. .| ......-+|+.|+. .
T Consensus 71 ssR~~~~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTIDNDl~~td~t~GfdTA~~~~~~a 150 (320)
T 1pfk_A 71 SARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEA 150 (320)
T ss_dssp CCCCGGGGSHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCTTCCCTTCSCCBTHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEECCCchHHHHHHHHhhCCCEEEEeccccCCCCCCcCCCCHHHHHHHHHHH
Confidence 55544 567888899999999999999999986411 00 00112346776554 3
Q ss_pred HHHHHHH---cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe-ccCCCHHHHHHHHHHHHH
Q 008423 107 VKHIRSA---YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT-QLFYDTDMFLKFVNDCRQ 182 (566)
Q Consensus 107 Vk~Ir~~---~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-QlffD~d~f~~f~~~~R~ 182 (566)
|..|+.. +.-.|-|=|-|---|| -.|..=+..|||+++. -.-||.+.+.+.+++.++
T Consensus 151 id~i~~ta~s~~rv~iVEvMGR~aG~-------------------lAl~a~lA~ga~~iliPE~~~~~~~i~~~i~~~~~ 211 (320)
T 1pfk_A 151 IDRLRDTSSSHQRISVVEVMGRYCGD-------------------LTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIA 211 (320)
T ss_dssp HHHHHHHHHHHTCEEEEEECCTTCCH-------------------HHHHHHHHTTCSEEECTTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEeCCcCHHH-------------------HHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4444432 3323444444432232 2345555678888766 455888888777777665
Q ss_pred cCCC
Q 008423 183 IGIT 186 (566)
Q Consensus 183 ~Gi~ 186 (566)
.|..
T Consensus 212 ~gk~ 215 (320)
T 1pfk_A 212 KGKK 215 (320)
T ss_dssp TTCS
T ss_pred cCCC
Confidence 5544
No 242
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=31.37 E-value=2.7e+02 Score=26.16 Aligned_cols=170 Identities=6% Similarity=-0.046 Sum_probs=81.6
Q ss_pred hhccCCCcCEEEecCCCC-CCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCC
Q 008423 11 TAWWPTTRHSATSRWGAG-GSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHG 89 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwgag-G~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~ 89 (566)
.++.....+++.+++-.. +......++++..+. ..+++++. ...-.+.+.++. +.+.|+..|++=+.....
T Consensus 37 ~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~ipvi~--~Ggi~~~~~~~~----~~~~Gad~V~lg~~~l~~- 108 (241)
T 1qo2_A 37 EKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFAEHIQI--GGGIRSLDYAEK----LRKLGYRRQIVSSKVLED- 108 (241)
T ss_dssp HHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGGGGEEE--ESSCCSHHHHHH----HHHTTCCEEEECHHHHHC-
T ss_pred HHHHHcCCCEEEEecccccccCCchhHHHHHHHH-hcCCcEEE--ECCCCCHHHHHH----HHHCCCCEEEECchHhhC-
Confidence 344455566777765211 001112344455554 44544432 121223444433 334687776543332211
Q ss_pred CCCccccCCCcccHHHHHHHHHHHcCCceeEEEEec---CCCCCC--CCCCCCCCCccchHHHHHHHHHHHHcCCcEE-E
Q 008423 90 QDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGY---PEGHPD--TIGPDGVASNESYQSDLLYLKKKVDAGADLI-I 163 (566)
Q Consensus 90 ~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgy---PEgHpe--~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi-I 163 (566)
-++++.+ +.+|+...+|+-.. .+-|.- ..+. + ..+..++=.++|+++| +
T Consensus 109 --------------p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~-------~---~~e~~~~~~~~G~~~i~~ 163 (241)
T 1qo2_A 109 --------------PSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEI-------D---PVSLLKRLKEYGLEEIVH 163 (241)
T ss_dssp --------------TTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCC-------C---HHHHHHHHHTTTCCEEEE
T ss_pred --------------hHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCC-------C---HHHHHHHHHhCCCCEEEE
Confidence 1235556 56775566777652 222211 1111 1 1233333446899964 4
Q ss_pred ec-------cCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--------cCCCCCCHHHHH
Q 008423 164 TQ-------LFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--------FCKTKIPAEITA 219 (566)
Q Consensus 164 TQ-------lffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--------l~Gv~VP~~il~ 219 (566)
|. .-+|.+.+.+..+.+ ++|||++ -.|.+...+.++.+ ..|+-|=..+++
T Consensus 164 t~~~~~g~~~g~~~~~i~~l~~~~-----~iPvia~-GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~ 228 (241)
T 1qo2_A 164 TEIEKDGTLQEHDFSLTKKIAIEA-----EVKVLAA-GGISSENSLKTAQKVHTETNGLLKGVIVGRAFLE 228 (241)
T ss_dssp EETTHHHHTCCCCHHHHHHHHHHH-----TCEEEEE-SSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHT
T ss_pred EeecccccCCcCCHHHHHHHHHhc-----CCcEEEE-CCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHc
Confidence 43 224655555444333 5898764 46677766666543 346667766654
No 243
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=31.35 E-value=45 Score=32.73 Aligned_cols=49 Identities=18% Similarity=0.336 Sum_probs=34.3
Q ss_pred HHHHHHHHHHH--cCCcEEEe------------ccCCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 146 SDLLYLKKKVD--AGADLIIT------------QLFYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 146 ~dl~~Lk~Kvd--AGAdFiIT------------QlffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
.+.....+.+. +|+|+|-- .+..+.+.+.+.++.+|+. +.+||+.-+.|
T Consensus 111 ~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~~ 173 (311)
T 1ep3_A 111 ADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLSP 173 (311)
T ss_dssp HHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEECS
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEECC
Confidence 45677777776 89998733 2334788888899999876 24788766653
No 244
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=31.35 E-value=1.1e+02 Score=29.23 Aligned_cols=74 Identities=5% Similarity=-0.077 Sum_probs=44.8
Q ss_pred cCCCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEecc------cc-----------------CCHHHHHHHHHH
Q 008423 14 WPTTRHSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTC------TN-----------------MPVEKIDHALQT 70 (566)
Q Consensus 14 ~~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTC------rd-----------------~n~~~L~~~L~~ 70 (566)
....-+.|-+............++-...+.+..|+.+..|-+. .+ ...+.++..+..
T Consensus 31 ~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~ 110 (290)
T 3tva_A 31 QDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDF 110 (290)
T ss_dssp HHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 3344466666653322222233433344444689998877331 11 123678888999
Q ss_pred HHHcCCCEEEEecCCCC
Q 008423 71 IKSNGIQNVLALRGDPP 87 (566)
Q Consensus 71 a~~~GIrNILaLrGDpp 87 (566)
|+++|++.|.+..|..|
T Consensus 111 a~~lG~~~v~~~~G~~~ 127 (290)
T 3tva_A 111 ASWVGCPAIGLHIGFVP 127 (290)
T ss_dssp HHHHTCSEEEECCCCCC
T ss_pred HHHcCCCEEEEcCCCCc
Confidence 99999999998888544
No 245
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=31.16 E-value=2.6e+02 Score=28.19 Aligned_cols=146 Identities=14% Similarity=0.143 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.|=+=-|+ ......+.|+.+|+..|+.+.|.+=++ .+ .+.
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~-------------~~~~~~e~v~avr~a~g~~~~l~vDan-~~----~~~---- 198 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGT-------------NVKEDVKRIEAVRERVGNDIAIRVDVN-QG----WKN---- 198 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-------------CHHHHHHHHHHHHHHHCTTSEEEEECT-TT----TBS----
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCC-------------CHHHHHHHHHHHHHHhCCCCeEEEECC-CC----CCH----
Confidence 66777777888889999887643332 134578899999999887788876653 11 122
Q ss_pred CccchHHHHH-HHHHHH-HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCH
Q 008423 140 SNESYQSDLL-YLKKKV-DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPA 215 (566)
Q Consensus 140 ~~~~~~~dl~-~Lk~Kv-dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~ 215 (566)
.+.. ++.+.+ +.|.++ |-|++- .+.+. ...++++. ..+||..+=. +.+...+.++.+. +.+-.++
T Consensus 199 ------~~a~~~~~~~l~~~~i~~-iEqP~~-~~d~~-~~~~l~~~-~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ik 267 (369)
T 2p8b_A 199 ------SANTLTALRSLGHLNIDW-IEQPVI-ADDID-AMAHIRSK-TDLPLMIDEG-LKSSREMRQIIKLEAADKVNIK 267 (369)
T ss_dssp ------HHHHHHHHHTSTTSCCSC-EECCBC-TTCHH-HHHHHHHT-CCSCEEESTT-CCSHHHHHHHHHHTCCSEEEEC
T ss_pred ------HHHHHHHHHHHHhCCCcE-EECCCC-cccHH-HHHHHHHh-CCCCEEeCCC-CCCHHHHHHHHHhCCCCEEEee
Confidence 2333 333334 346665 689973 33332 33444443 4689887754 6777777765432 2222221
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
- .+-=|+.-+.++++...++|++
T Consensus 268 ~--------------~~~GGit~~~~i~~~A~~~g~~ 290 (369)
T 2p8b_A 268 L--------------MKCGGIYPAVKLAHQAEMAGIE 290 (369)
T ss_dssp H--------------HHHTSHHHHHHHHHHHHHTTCE
T ss_pred c--------------chhCCHHHHHHHHHHHHHcCCc
Confidence 0 2223677777777777777654
No 246
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=31.10 E-value=3.1e+02 Score=29.35 Aligned_cols=96 Identities=15% Similarity=0.137 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCceeEEeccccC---CHHHHHHHHHHHHHcCCCEEEE---ecCCCCCCCCCccccCCCcccHHHHHHHH
Q 008423 37 DIANRMQNTICVETMMHLTCTNM---PVEKIDHALQTIKSNGIQNVLA---LRGDPPHGQDKFVQIQGGFACALDLVKHI 110 (566)
Q Consensus 37 ~la~~lq~~~Gle~i~HLTCrd~---n~~~L~~~L~~a~~~GIrNILa---LrGDpp~~~~~~~~~~~~F~~A~dLVk~I 110 (566)
..+..+++ .|+++...++|.+- +.+.+.+.++++.++|++.|-+ ..+-.|. ...+||+.+
T Consensus 131 ~~i~~ak~-~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~-------------~v~~lv~~l 196 (464)
T 2nx9_A 131 QALQAVKK-MGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPY-------------AAEELVSTL 196 (464)
T ss_dssp HHHHHHHH-TTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHH-------------HHHHHHHHH
T ss_pred HHHHHHHH-CCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHH-------------HHHHHHHHH
Q ss_pred HHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe
Q 008423 111 RSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT 164 (566)
Q Consensus 111 r~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT 164 (566)
++.. ...||+-++=..- .-+....+=++|||+.|-|
T Consensus 197 ~~~~--~~~i~~H~Hnd~G----------------lAvAN~laAv~AGa~~VD~ 232 (464)
T 2nx9_A 197 KKQV--DVELHLHCHSTAG----------------LADMTLLKAIEAGVDRVDT 232 (464)
T ss_dssp HHHC--CSCEEEEECCTTS----------------CHHHHHHHHHHTTCSEEEE
T ss_pred HHhc--CCeEEEEECCCCC----------------hHHHHHHHHHHhCCCEEEE
No 247
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=31.05 E-value=85 Score=29.50 Aligned_cols=48 Identities=4% Similarity=-0.023 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEec
Q 008423 35 TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR 83 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLr 83 (566)
.-++.+.++ ..|++++.|-...+.+.+.+++.+..|+++|++.|.+-.
T Consensus 65 ~~~~~~~l~-~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 65 QKEIKELAA-SKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp HHHHHHHHH-HTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHH-HcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecC
Confidence 344444555 589999888776677888999999999999999999753
No 248
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=31.04 E-value=2.4e+02 Score=28.88 Aligned_cols=122 Identities=16% Similarity=0.175 Sum_probs=76.0
Q ss_pred cCCCCCCCc---hhHHHHHHHHHhhcCC-ceeEEecccc--------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC
Q 008423 24 RWGAGGSTA---DLTLDIANRMQNTICV-ETMMHLTCTN--------MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD 91 (566)
Q Consensus 24 TwgagG~~~---~~Sl~la~~lq~~~Gl-e~i~HLTCrd--------~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~ 91 (566)
|+.-||+.. ...++++..+++..|- ++..-|++.+ .+.+.....+..+.++|+.-|-+..|.... .
T Consensus 200 ~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-~- 277 (365)
T 2gou_A 200 SDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDD-A- 277 (365)
T ss_dssp CSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTB-C-
T ss_pred CcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCC-C-
Confidence 444455521 2367888888887764 5666777743 244566677778889999988877654321 0
Q ss_pred CccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcC-CcEE--EeccCC
Q 008423 92 KFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAG-ADLI--ITQLFY 168 (566)
Q Consensus 92 ~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAG-AdFi--ITQlff 168 (566)
. .+. .++++.||+..+. --|++.++ . .+...+.+++| ||+| -+.++.
T Consensus 278 -----~-~~~--~~~~~~i~~~~~i-Pvi~~Ggi-~--------------------~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 278 -----P-DTP--VSFKRALREAYQG-VLIYAGRY-N--------------------AEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp -----C-CCC--HHHHHHHHHHCCS-EEEEESSC-C--------------------HHHHHHHHHTTSCSEEECCHHHHH
T ss_pred -----C-Ccc--HHHHHHHHHHCCC-cEEEeCCC-C--------------------HHHHHHHHHCCCcceehhcHHHHh
Confidence 1 122 3678888887753 34555443 1 22346667788 9975 568888
Q ss_pred CHHHHHHHH
Q 008423 169 DTDMFLKFV 177 (566)
Q Consensus 169 D~d~f~~f~ 177 (566)
|++.+.++.
T Consensus 328 ~P~l~~~~~ 336 (365)
T 2gou_A 328 NPDLPERLR 336 (365)
T ss_dssp CTTHHHHHH
T ss_pred CchHHHHHH
Confidence 887766553
No 249
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=31.00 E-value=3e+02 Score=26.30 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=67.0
Q ss_pred EeccccCC------HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEE--e
Q 008423 53 HLTCTNMP------VEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVA--G 124 (566)
Q Consensus 53 HLTCrd~n------~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVA--g 124 (566)
=.+|.... ...+.+.-..+.+.|...|-+ | +.+-|+.||+...- --||+- .
T Consensus 21 ivscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~--~------------------~~~~i~~ir~~v~~-Pvig~~k~~ 79 (229)
T 3q58_A 21 IVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRI--E------------------GIENLRTVRPHLSV-PIIGIIKRD 79 (229)
T ss_dssp EEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEE--E------------------SHHHHHHHGGGCCS-CEEEECBCC
T ss_pred EEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEE--C------------------CHHHHHHHHHhcCC-CEEEEEeec
Confidence 34777665 666667777778899888765 1 13446777765432 124432 2
Q ss_pred cCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC--CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHH
Q 008423 125 YPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF--YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGF 202 (566)
Q Consensus 125 yPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf--fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~ 202 (566)
|+. |+..-++ .++.+.+=+++|||+|+.-.- -+++.+.++++.+++.| +++++.+. +...+
T Consensus 80 ~~~-~~~~I~~-----------~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v~---t~eea 142 (229)
T 3q58_A 80 LTG-SPVRITP-----------YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG--LLAMADCS---TVNEG 142 (229)
T ss_dssp CSS-CCCCBSC-----------SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEECS---SHHHH
T ss_pred CCC-CceEeCc-----------cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC--CEEEEecC---CHHHH
Confidence 221 1111111 122333446799999875443 35677888999999876 67777754 55555
Q ss_pred HHH
Q 008423 203 LRM 205 (566)
Q Consensus 203 ~r~ 205 (566)
.+.
T Consensus 143 ~~a 145 (229)
T 3q58_A 143 ISC 145 (229)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 250
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=30.90 E-value=83 Score=29.36 Aligned_cols=58 Identities=14% Similarity=0.195 Sum_probs=45.4
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+=|....+++|++.-.++..-.++.+.+.+.+..|.+.|++=|.+..|-.
T Consensus 11 gs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~a 69 (163)
T 3ors_A 11 GSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGA 69 (163)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCch
Confidence 444443 3344444445799999999999999999999999999999999888887754
No 251
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=30.88 E-value=2.3e+02 Score=29.16 Aligned_cols=111 Identities=14% Similarity=0.125 Sum_probs=62.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEec-----CCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGY-----PEGHPDTI 133 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgy-----PEgHpe~~ 133 (566)
-+.+.....|..++++||+.|+.++|-...+ .+...|.+..+ .+|-....++..| |.--..
T Consensus 72 ~~~~~~~~el~~~~~aGv~tiV~~~g~~g~~-----------r~~~~l~~la~-~~gi~i~~~tG~y~~~~~P~~~~~-- 137 (365)
T 3rhg_A 72 KPIEDVIFELNNFKELGGKTIVDATGSSSIG-----------RDIRKLKQVAE-LTGINVVASSGLYIEKFEGKRLAD-- 137 (365)
T ss_dssp CCHHHHHHHHHHHHHTTEEEEEECCCSGGGT-----------CCHHHHHHHHH-HHCCEEECEECCCCHHHHGGGGGS--
T ss_pred ccHHHHHHHHHHHHhcCCCeEEEcCCCCCCC-----------CCHHHHHHHHH-HHCCcEEEEeCccCCCCCchhhcC--
Confidence 3566777889999999999999888543211 12333444443 5664344444455 421110
Q ss_pred CCCCCCCccchHHHHHHHHHHHHcCCc------EEE----eccCCCHHHHHHHHHHHHHcC-C-CCcEEee
Q 008423 134 GPDGVASNESYQSDLLYLKKKVDAGAD------LII----TQLFYDTDMFLKFVNDCRQIG-I-TCPIVPG 192 (566)
Q Consensus 134 ~~~~~~~~~~~~~dl~~Lk~KvdAGAd------FiI----TQlffD~d~f~~f~~~~R~~G-i-~vPIIpG 192 (566)
+.+...+.+.+++..|++ -+| .-..+.......|...+|.++ . .+||+.=
T Consensus 138 ---------~~~~L~~~~~~ei~~gi~~t~vkag~IGEiGld~~~t~~q~~~f~aq~~~A~~~~glPV~iH 199 (365)
T 3rhg_A 138 ---------DIDAMAKMIDDELNIGIDGTDIRAGMIGEIGVSPFFTDGEKNSLRAAALAQNNNPYASMNIH 199 (365)
T ss_dssp ---------CHHHHHHHHHHHHHTCSTTSSCCCCEEEEEECCTTCCHHHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred ---------CHHHHHHHHHHHHHhccccCCceeEEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 122333456666654442 111 112345677777888888765 3 5787643
No 252
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=30.73 E-value=82 Score=29.61 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=44.7
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+-|..+.+++|++.-..+..-.++.+.+.+....|.+.|++=|.+..|-.
T Consensus 19 GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~a 77 (170)
T 1xmp_A 19 GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGA 77 (170)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCch
Confidence 344443 3333444444799999999999999999999999999999999888887754
No 253
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=30.71 E-value=56 Score=29.80 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=37.9
Q ss_pred HHHHHHHHH----HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeeccc--CCHHHHHHHhccCCCCCCHH
Q 008423 147 DLLYLKKKV----DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPI--NNYKGFLRMTGFCKTKIPAE 216 (566)
Q Consensus 147 dl~~Lk~Kv----dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI--~s~~~~~r~~~l~Gv~VP~~ 216 (566)
|.++|++++ ++||+.++||--.|.-... .+.++|| |-+ .+...+.|+++.+|..+=.+
T Consensus 57 E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~----~l~k~gI--------~~v~~v~~~dleria~atGa~iv~~ 120 (159)
T 1ass_A 57 ETNTFKQMVEKIKKSGANVVLCQKGIDDVAQH----YLAKEGI--------YAVRRVKKSDMEKLAKATGAKIVTD 120 (159)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEESSCBCHHHHH----HHHHTTC--------EEECSCCHHHHHHHHHHHTCCCBSS
T ss_pred HHHHHHHHhhhhhhCCCeEEEECCccCHHHHH----HHHHCCC--------EEEccCCHHHHHHHHHHhCCeeeCc
Confidence 344444444 5699999999998776643 3445563 222 35568889999999876433
No 254
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=30.70 E-value=2.5e+02 Score=29.02 Aligned_cols=153 Identities=13% Similarity=0.051 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCc
Q 008423 62 EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASN 141 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~ 141 (566)
+++.+..+++.+.|.+.+=+=-|.... |..........++.|+.+|+..|+...|.+=+|-- .+.
T Consensus 150 e~~~~~a~~~~~~Gf~~~KlKvg~~~~----~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~-----w~~------ 214 (392)
T 3v5c_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGR----HMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNA-----YNL------ 214 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCTTTT----TSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTC-----CCH------
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCc----cccccccHHHHHHHHHHHHHHcCCCCcEEeeCCCC-----cCH------
Confidence 455555666678999887643343211 11111123457788999999877777776654321 122
Q ss_pred cchHHHHHHHHHHHHcCCcEEEeccCC-CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh--ccCCCCCCHHHH
Q 008423 142 ESYQSDLLYLKKKVDAGADLIITQLFY-DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT--GFCKTKIPAEIT 218 (566)
Q Consensus 142 ~~~~~dl~~Lk~KvdAGAdFiITQlff-D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~--~l~Gv~VP~~il 218 (566)
.+..++.+.++.--=++|=|++- |.+.+.++.+.++..+..+||-.|=.-. ...++++. ..+.+-.|+-
T Consensus 215 ----~~A~~~~~~L~~~~l~~iEeP~~~d~~~~~~l~~~~~~~~~~ipIa~gE~~~--~~~~~~li~~~a~dii~~d~-- 286 (392)
T 3v5c_A 215 ----NLTKEVLAALSDVNLYWLEAAFHEDEALYEDLKEWLGQRGQNVLIADGEGLA--SPHLIEWATRGRVDVLQYDI-- 286 (392)
T ss_dssp ----HHHHHHHHHTTTSCCCEEECSSSCCHHHHHHHHHHHHHHTCCCEEEECCSSC--CTTHHHHHHTTSCCEECCBT--
T ss_pred ----HHHHHHHHhcccCCCeEEeCCCCcCHHHHHHHHHhhccCCCCCcEECCCccc--HHHHHHHHHcCCCcEEEeCC--
Confidence 34445555654322368999997 6666666666666556778988774422 22333333 2232222211
Q ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 219 AALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 219 ~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
.+ -|+.-+.+++.-....|
T Consensus 287 ------------~~-GGitea~kia~~A~~~g 305 (392)
T 3v5c_A 287 ------------IW-PGFTHWMELGEKLDAHG 305 (392)
T ss_dssp ------------TT-BCHHHHHHHHHHHHHTT
T ss_pred ------------CC-CCHHHHHHHHHHHHHcC
Confidence 12 36666677777666666
No 255
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=30.67 E-value=82 Score=29.91 Aligned_cols=51 Identities=10% Similarity=0.206 Sum_probs=42.0
Q ss_pred HHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 36 LDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 36 l~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
.+-+..+.+++|++.-.++..-.++.+.+.+.+..|.+.|++=|.+..|-.
T Consensus 37 ~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~a 87 (182)
T 1u11_A 37 MRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGA 87 (182)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESS
T ss_pred HHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCch
Confidence 333444444799999999999999999999999999999999888887754
No 256
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=30.56 E-value=1.7e+02 Score=29.96 Aligned_cols=145 Identities=9% Similarity=-0.003 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.|=+=-|+ +......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~------------~~~~~~~e~v~avr~a~g~~~~l~vDan-~~----~~~---- 223 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGG------------APIEEDRMRIEAVLEEIGKDAQLAVDAN-GR----FNL---- 223 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSS------------SCHHHHHHHHHHHHHHHTTTCEEEEECT-TC----CCH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC------------CCHHHHHHHHHHHHHhcCCCCeEEEECC-CC----CCH----
Confidence 67778888888888999887643343 1234578899999998888788887553 11 122
Q ss_pred CccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc------cCC
Q 008423 140 SNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG------FCK 210 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~------l~G 210 (566)
.+..++.+.++ .|.+| |-|++- |.+.+ .++++. ..+||..+= -+.+...+.++.+ .+.
T Consensus 224 ------~~a~~~~~~l~~~~i~~-iEqP~~~~d~~~~----~~l~~~-~~iPIa~dE-~~~~~~~~~~~i~~~~~~~~~d 290 (392)
T 1tzz_A 224 ------ETGIAYAKMLRDYPLFW-YEEVGDPLDYALQ----AALAEF-YPGPMATGE-NLFSHQDARNLLRYGGMRPDRD 290 (392)
T ss_dssp ------HHHHHHHHHHTTSCCSE-EECCSCTTCHHHH----HHHTTT-CCSCEEECT-TCCSHHHHHHHHHHSCCCTTTC
T ss_pred ------HHHHHHHHHHHHcCCCe-ecCCCChhhHHHH----HHHHhh-CCCCEEECC-CCCCHHHHHHHHHcCCCccCCc
Confidence 23333444454 46665 689986 43333 334432 468987765 4577777776544 232
Q ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 211 TKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 211 v~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+-.++ + .+-=|+.-+.++++...+.|++
T Consensus 291 ~v~ik-----~---------~~~GGit~~~~i~~~A~~~gi~ 318 (392)
T 1tzz_A 291 WLQFD-----C---------ALSYGLCEYQRTLEVLKTHGWS 318 (392)
T ss_dssp EECCC-----T---------TTTTCHHHHHHHHHHHHHTTCC
T ss_pred EEEEC-----c---------cccCCHHHHHHHHHHHHHCCCC
Confidence 22221 0 1122566677777777777754
No 257
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=30.52 E-value=5.6e+02 Score=27.84 Aligned_cols=169 Identities=10% Similarity=0.039 Sum_probs=87.5
Q ss_pred EEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHH----HHHHcCCCEEEEecCCCCCCCCCcccc
Q 008423 21 ATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQ----TIKSNGIQNVLALRGDPPHGQDKFVQI 96 (566)
Q Consensus 21 VsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~----~a~~~GIrNILaLrGDpp~~~~~~~~~ 96 (566)
.-||+.........-++.++.+.+ .| -.+.||...+.+..++.+... -++..|+. |++-.+..-... ..+
T Consensus 13 YlITd~~~~~~~~~l~~~ve~al~-~G-v~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~--liIND~~dlA~~--~gA 86 (540)
T 3nl6_A 13 YLVTDSGMIPEGKTLYGQVEAGLQ-NG-VTLVQIREKDADTKFFIEEALQIKELCHAHNVP--LIINDRIDVAMA--IGA 86 (540)
T ss_dssp EEEC-CTTCCTTCCHHHHHHHHHH-TT-CSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCC--EEECSCSHHHHH--TTC
T ss_pred EEEECchhccCcchHHHHHHHHHH-CC-CCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCE--EEEeCcHHHHHH--cCC
Confidence 448875422111123344444443 46 578899988887554443333 33667876 434332210000 001
Q ss_pred CCCccc-HHHH-HHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcC---CcEEEeccCCC--
Q 008423 97 QGGFAC-ALDL-VKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAG---ADLIITQLFYD-- 169 (566)
Q Consensus 97 ~~~F~~-A~dL-Vk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAG---AdFiITQlffD-- 169 (566)
.| ... ..|+ ++.+|+..+....||+.++- .+.+++-.+.| |||+..=++|.
T Consensus 87 dG-VHLgq~dl~~~~ar~~lg~~~iiG~S~ht---------------------~eea~~A~~~G~~~aDYv~~Gpvf~T~ 144 (540)
T 3nl6_A 87 DG-IHVGQDDMPIPMIRKLVGPDMVIGWSVGF---------------------PEEVDELSKMGPDMVDYIGVGTLFPTL 144 (540)
T ss_dssp SE-EEECTTSSCHHHHHHHHCTTSEEEEEECS---------------------HHHHHHHHHTCC--CCEEEESCCSCCC
T ss_pred CE-EEEChhhcCHHHHHHHhCCCCEEEEECCC---------------------HHHHHHHHHcCCCCCCEEEEcCCCCCC
Confidence 11 111 1222 44566667767899999841 12233444679 99999888875
Q ss_pred -----------HHHHHHHHHHHHHc-CCCCcE--EeeecccCCHHHHHHH-------hccCCCCCCHHHH
Q 008423 170 -----------TDMFLKFVNDCRQI-GITCPI--VPGIMPINNYKGFLRM-------TGFCKTKIPAEIT 218 (566)
Q Consensus 170 -----------~d~f~~f~~~~R~~-Gi~vPI--IpGImPI~s~~~~~r~-------~~l~Gv~VP~~il 218 (566)
.+.+.+..+.+++. ..++|| |-||- ..+...+..- +..-|+.|=..|+
T Consensus 145 tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI~-~~ni~~v~~~~~~~g~~~GadgvAVvsaI~ 213 (540)
T 3nl6_A 145 TKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGLH-PDNIERVLYQCVSSNGKRSLDGICVVSDII 213 (540)
T ss_dssp CCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSCC-TTTHHHHHHHCBCTTSSCBCSCEEESHHHH
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCCC-HHHHHHHHHhhcccccccCceEEEEeHHHh
Confidence 34444455555443 357887 45774 3555555431 2355666666654
No 258
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=30.49 E-value=1.4e+02 Score=27.89 Aligned_cols=63 Identities=13% Similarity=0.051 Sum_probs=38.2
Q ss_pred hccCCCcCEEEecCC--C-CCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEec
Q 008423 12 AWWPTTRHSATSRWG--A-GGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR 83 (566)
Q Consensus 12 ~~~~~~p~fVsVTwg--a-gG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLr 83 (566)
++.+...++++|-.- . .+... . +..+.+.+..+++++.|.-.+ +.+. +..+.++|+.-|++=+
T Consensus 39 ~~~~~Gad~i~v~~~d~~~~~~~~--~-~~i~~i~~~~~ipv~v~ggi~--~~~~----~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 39 GWQRDGAEWIHLVDLDAAFGRGSN--H-ELLAEVVGKLDVQVELSGGIR--DDES----LAAALATGCARVNVGT 104 (244)
T ss_dssp HHHHTTCSEEEEEEHHHHTTSCCC--H-HHHHHHHHHCSSEEEEESSCC--SHHH----HHHHHHTTCSEEEECH
T ss_pred HHHHcCCCEEEEEcCcccccCCCh--H-HHHHHHHHhcCCcEEEECCCC--CHHH----HHHHHHcCCCEEEECc
Confidence 444556778877531 1 12221 2 666677777889998887665 3343 4444558988877544
No 259
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=30.41 E-value=4.5e+02 Score=26.73 Aligned_cols=185 Identities=12% Similarity=0.082 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHhhc-CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-cCCCcccHHHHHHHH
Q 008423 33 DLTLDIANRMQNTI-CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ-IQGGFACALDLVKHI 110 (566)
Q Consensus 33 ~~Sl~la~~lq~~~-Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~-~~~~F~~A~dLVk~I 110 (566)
+.-+..++.+.+.. .++++.=+-.---+.+...+...++.++|+.-|-+=-|..|+.-.+-.. .--.....++-|+.+
T Consensus 86 ~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa 165 (318)
T 1zlp_A 86 TEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAA 165 (318)
T ss_dssp HHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHH
Confidence 44556666666656 7777777765422778888888888889999998766664432111000 001122345556666
Q ss_pred HHHc--CCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCc
Q 008423 111 RSAY--GDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCP 188 (566)
Q Consensus 111 r~~~--gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vP 188 (566)
++.. ++ |.|-.=.--.. ...+++-+++.+.=.+||||.|+--..-+.+.+.+|.+.+ ++|
T Consensus 166 ~~A~~~~~-~~I~ARtda~a------------~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l-----~~P 227 (318)
T 1zlp_A 166 REAIGDSD-FFLVARTDARA------------PHGLEEGIRRANLYKEAGADATFVEAPANVDELKEVSAKT-----KGL 227 (318)
T ss_dssp HHHHTTSC-CEEEEEECTHH------------HHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS-----CSE
T ss_pred HHhcccCC-cEEEEeeHHhh------------hcCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc-----CCC
Confidence 5543 44 54433221100 0123367889999999999998888888888888887664 489
Q ss_pred EEeeec-----ccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 189 IVPGIM-----PINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 189 IIpGIm-----PI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
++.-++ |..+.+.+..+ -+.-+.+|...+... +.-+.+..+.|++.|
T Consensus 228 ~lan~~~~g~~~~~~~~eL~~l-Gv~~v~~~~~~~raa--------------~~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 228 RIANMIEGGKTPLHTPEEFKEM-GFHLIAHSLTAVYAT--------------ARALVNIMKILKEKG 279 (318)
T ss_dssp EEEEECTTSSSCCCCHHHHHHH-TCCEEEECSHHHHHH--------------HHHHHHHHHHHHHHS
T ss_pred EEEEeccCCCCCCCCHHHHHHc-CCeEEEEchHHHHHH--------------HHHHHHHHHHHHHcC
Confidence 876554 55666665542 233355665554322 233345666677655
No 260
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=30.40 E-value=1.5e+02 Score=23.88 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
+.++++.||+.++.--.|-+++++. .....+-.++||+-+++-++.+.+.+.+-++.+-
T Consensus 66 g~~~~~~l~~~~~~~~ii~~t~~~~--------------------~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~~l 124 (130)
T 3eod_A 66 GLKLLEHIRNRGDQTPVLVISATEN--------------------MADIAKALRLGVEDVLLKPVKDLNRLREMVFACL 124 (130)
T ss_dssp CHHHHHHHHHTTCCCCEEEEECCCC--------------------HHHHHHHHHHCCSEEEESCC---CHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEEcCCC--------------------HHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHHHh
Confidence 5788899998654323344444331 2223444578999999999988888887777664
No 261
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=30.38 E-value=1.1e+02 Score=33.84 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCCcEEEeccCC-CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 146 SDLLYLKKKVDAGADLIITQLFY-DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQlff-D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
.+.++.+.=++||+|+|+-+.-- ..+.+++.++.+|+...++|||+|= +.++..++.+.
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGN--VaT~e~a~~Li 340 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGN--VVTREQAAQLI 340 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHHH
T ss_pred cHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEecc--ccCHHHHHHHH
Confidence 56888888899999999876654 4566788999999987789999995 77887776653
No 262
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=30.37 E-value=1.9e+02 Score=26.31 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=46.4
Q ss_pred CCCcCEEEecCCCCCCCc-hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHc-CCCEEEEecCCCC
Q 008423 15 PTTRHSATSRWGAGGSTA-DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSN-GIQNVLALRGDPP 87 (566)
Q Consensus 15 ~~~p~fVsVTwgagG~~~-~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~-GIrNILaLrGDpp 87 (566)
+.....|++-+- .|... .++..+++.+++ .|.++..+..+.| +.+.|.+.|..+.+. +++ +++.+|--.
T Consensus 10 ~~~v~Ii~tGdE-~g~i~D~n~~~l~~~L~~-~G~~v~~~~iv~D-d~~~i~~~l~~a~~~~~~D-lVittGG~g 80 (172)
T 1mkz_A 10 PTRIAILTVSNR-RGEEDDTSGHYLRDSAQE-AGHHVVDKAIVKE-NRYAIRAQVSAWIASDDVQ-VVLITGGTG 80 (172)
T ss_dssp CCEEEEEEECSS-CCGGGCHHHHHHHHHHHH-TTCEEEEEEEECS-CHHHHHHHHHHHHHSSSCC-EEEEESCCS
T ss_pred CCEEEEEEEeCC-CCcccCccHHHHHHHHHH-CCCeEeEEEEeCC-CHHHHHHHHHHHHhcCCCC-EEEeCCCCC
Confidence 344455666555 34433 455677777775 8999888877755 789999999998776 565 555666543
No 263
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=30.26 E-value=1.5e+02 Score=32.07 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=75.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCc--------------c-------c-cCC-------Ccc--cHHHH
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKF--------------V-------Q-IQG-------GFA--CALDL 106 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~--------------~-------~-~~~-------~F~--~A~dL 106 (566)
+.+++.+.+.+++|.++|++-|. |+-|.|..+.+. . . ..+ .++ .+.+.
T Consensus 256 ~~d~~~~~~~~~rae~aG~~al~-itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~ 334 (511)
T 1kbi_A 256 NSDRKITDDLVKNVEKLGVKALF-VTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKD 334 (511)
T ss_dssp CSSHHHHHHHHHHHHHHTCSCEE-EECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEE-EeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHH
Confidence 55678888999999999987654 677755422100 0 0 000 011 23667
Q ss_pred HHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe------ccCCC---HHHHHHHH
Q 008423 107 VKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT------QLFYD---TDMFLKFV 177 (566)
Q Consensus 107 Vk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT------QlffD---~d~f~~f~ 177 (566)
|+.||+..+-.+.+.....+ ++.. +=+++|||+|+. |+-.. .+.+.+..
T Consensus 335 i~~lr~~~~~PvivKgv~~~-------------------e~A~---~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~ 392 (511)
T 1kbi_A 335 IEELKKKTKLPIVIKGVQRT-------------------EDVI---KAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETM 392 (511)
T ss_dssp HHHHHHHCSSCEEEEEECSH-------------------HHHH---HHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEeCCCH-------------------HHHH---HHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHH
Confidence 89999876533333322211 2332 234799999876 65332 23344444
Q ss_pred HHHHHcC--CCCcEEeeecccCCHHHHHHHhccCC---CCCCHHHHHHh
Q 008423 178 NDCRQIG--ITCPIVPGIMPINNYKGFLRMTGFCK---TKIPAEITAAL 221 (566)
Q Consensus 178 ~~~R~~G--i~vPIIpGImPI~s~~~~~r~~~l~G---v~VP~~il~~L 221 (566)
+.+++.+ -++|||. -=.|.+...+.++.. +| |.|-..++-.+
T Consensus 393 ~~v~~~~~~~~ipVia-~GGI~~g~Dv~kaLa-lGAdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 393 PILEQRNLKDKLEVFV-DGGVRRGTDVLKALC-LGAKGVGLGRPFLYAN 439 (511)
T ss_dssp HHHHTTTCBTTBEEEE-ESSCCSHHHHHHHHH-HTCSEEEECHHHHHHH
T ss_pred HHHHhhccCCCcEEEE-ECCCCCHHHHHHHHH-cCCCEEEECHHHHHHH
Confidence 5554333 2688765 224566665555443 34 44555665544
No 264
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=30.09 E-value=4.7e+02 Score=26.91 Aligned_cols=170 Identities=12% Similarity=0.052 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH-HHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV-KHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV-k~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
+.+.+......+...|++.|+...+..+. .....+.+-+ +...+ .. ...+|+ ++++... +.
T Consensus 96 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---------~~~~~~~~~~~~~~~~-~~-~~~~g~--~~~~~~~--~~--- 157 (501)
T 2vm8_A 96 SADDFFQGTKAALAGGTTMIIDHVVPEPG---------TSLLAAFDQWREWADS-KS-CCDYSL--HVDISEW--HK--- 157 (501)
T ss_dssp CSSCHHHHHHHHHHTTEEEEEEEECCCTT---------SCHHHHHHHHHHHHHH-HC-SSEEEE--EEECCSC--SH---
T ss_pred cHHHHHHHHHHHHhCCcEEEEeCCCCCCC---------CChHHHHHHHHHHHhc-CC-eeEEEE--EEEecCC--Cc---
Confidence 35666777778889999999976432111 0111122221 22222 11 223332 2222111 00
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEec------cCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCH---HHHHHHhccC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQ------LFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNY---KGFLRMTGFC 209 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQ------lffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~---~~~~r~~~l~ 209 (566)
....++..+.++ .|++.+-+- ...+.+.+.+.++.+++.|. ||..= + .+. ....+...-.
T Consensus 158 ----~~~~e~~~l~~~--~G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~--~v~~H--~-e~~~~~~~~~~~~~~~ 226 (501)
T 2vm8_A 158 ----GIQEEMEALVKD--HGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGA--IAQVH--A-ENGDIIAEEQQRILDL 226 (501)
T ss_dssp ----HHHHHHHHHHHH--SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTC--EEEEE--C-CCHHHHHHHHHHHHTT
T ss_pred ----ccHHHHHHHHHh--CCceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCC--EEEEE--c-cChHHHHHHHHHHHhc
Confidence 011345555543 799866432 24578899999999998873 43221 1 121 1222233445
Q ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcCCchHHHHHH
Q 008423 210 KTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAI 268 (566)
Q Consensus 210 Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~GiHfyTlN~e~~v~~I 268 (566)
|+..+..-... +++......++.+.++++.. |++ +|++-+...+.+..|
T Consensus 227 G~~~~~~~~~~------~~~~~~~~~i~~~~~l~~~~---g~~-~hi~h~~~~~~~~~i 275 (501)
T 2vm8_A 227 GITGPEGHVLS------RPEEVEAEAVNRAITIANQT---NCP-LYITKVMSKSSAEVI 275 (501)
T ss_dssp TCCSTHHHHHH------SCHHHHHHHHHHHHHHHHHH---TCC-EEEEEECCHHHHHHH
T ss_pred CCCChhhcccc------CCHHHHHHHHHHHHHHHHHh---CCc-EEEEeCCcHHHHHHH
Confidence 66665443222 11222223344444444332 433 676666655444333
No 265
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=29.57 E-value=2.1e+02 Score=29.66 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=55.9
Q ss_pred HHHHHHHHHhhcCCceeEEeccccC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHH
Q 008423 35 TLDIANRMQNTICVETMMHLTCTNM-PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSA 113 (566)
Q Consensus 35 Sl~la~~lq~~~Gle~i~HLTCrd~-n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~ 113 (566)
.+.+...+-+ .|.++++= |+| +.+++..+++...+.|. ||.++.|-. .++. +.... -+..|..+++.
T Consensus 137 n~~LL~~va~-~gkPviLs---tGmat~~Ei~~Ave~i~~~G~-~iiLlhc~s----~Yp~-~~~~~--nL~ai~~lk~~ 204 (349)
T 2wqp_A 137 NYPLIKLVAS-FGKPIILS---TGMNSIESIKKSVEIIREAGV-PYALLHCTN----IYPT-PYEDV--RLGGMNDLSEA 204 (349)
T ss_dssp CHHHHHHHHT-TCSCEEEE---CTTCCHHHHHHHHHHHHHHTC-CEEEEECCC----CSSC-CGGGC--CTHHHHHHHHH
T ss_pred CHHHHHHHHh-cCCeEEEE---CCCCCHHHHHHHHHHHHHcCC-CEEEEeccC----CCCC-Chhhc--CHHHHHHHHHH
Confidence 4445555554 68887763 455 78899999998888998 777776432 1211 11222 23335667877
Q ss_pred cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE
Q 008423 114 YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI 162 (566)
Q Consensus 114 ~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi 162 (566)
++. .-|| || .|... +.--..=+.+||++|
T Consensus 205 f~~-lpVg---~s-dHt~G---------------~~~~~AAvAlGA~iI 233 (349)
T 2wqp_A 205 FPD-AIIG---LS-DHTLD---------------NYACLGAVALGGSIL 233 (349)
T ss_dssp CTT-SEEE---EE-CCSSS---------------SHHHHHHHHHTCCEE
T ss_pred CCC-CCEE---eC-CCCCc---------------HHHHHHHHHhCCCEE
Confidence 731 4454 54 45321 222355678899954
No 266
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=29.57 E-value=92 Score=29.15 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=45.4
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+-+..+.+.+|++.-.++..-.++.+.+.+.+..+.+.|++=|.+..|-.
T Consensus 13 gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a 71 (166)
T 3oow_A 13 GSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGA 71 (166)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSS
T ss_pred CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcc
Confidence 444443 3344444444799999999999999999999999999999999888888764
No 267
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=29.15 E-value=1.9e+02 Score=23.52 Aligned_cols=59 Identities=17% Similarity=0.461 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ 182 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~ 182 (566)
+.++++.||+.+..--.|.++++.. .....+-+++||+-+++.+ ++.+.+..-++++.+
T Consensus 66 g~~~~~~l~~~~~~~~ii~~s~~~~--------------------~~~~~~~~~~g~~~~l~kP-~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 66 GLEMLDRIKAGGAKPYVIVISAFSE--------------------MKYFIKAIELGVHLFLPKP-IEPGRLMETLEDFRH 124 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEECCCCCC--------------------HHHHHHHHHHCCSEECCSS-CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEEecCcC--------------------hHHHHHHHhCCcceeEcCC-CCHHHHHHHHHHHHH
Confidence 7889999998764322333333221 2233445679999999998 577777777777664
No 268
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=29.11 E-value=3.6e+02 Score=25.72 Aligned_cols=150 Identities=14% Similarity=0.082 Sum_probs=85.1
Q ss_pred hhccCCCcC--EEEecCCCCCCCchhHHHHHHHHHhhc--CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 11 TAWWPTTRH--SATSRWGAGGSTADLTLDIANRMQNTI--CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 11 ~~~~~~~p~--fVsVTwgagG~~~~~Sl~la~~lq~~~--Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
.++.+...+ .++|-+|..-..-.-...+++.+++.+ .++.-.||-+.+- ...+..+.++|+.-|.+-. ..
T Consensus 24 ~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p-----~~~i~~~~~aGad~itvH~-Ea 97 (228)
T 3ovp_A 24 LRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKP-----EQWVKPMAVAGANQYTFHL-EA 97 (228)
T ss_dssp HHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCG-----GGGHHHHHHHTCSEEEEEG-GG
T ss_pred HHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCH-----HHHHHHHHHcCCCEEEEcc-CC
Confidence 344444455 556666543222223445677777763 6777889887443 2456677889998888631 11
Q ss_pred CCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE--e
Q 008423 87 PHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII--T 164 (566)
Q Consensus 87 p~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--T 164 (566)
..+...+++.||+ +| ..+|++.+|.-.. +.++.+. ..+|++. |
T Consensus 98 -------------~~~~~~~i~~i~~-~G--~k~gval~p~t~~---------------e~l~~~l----~~~D~Vl~ms 142 (228)
T 3ovp_A 98 -------------TENPGALIKDIRE-NG--MKVGLAIKPGTSV---------------EYLAPWA----NQIDMALVMT 142 (228)
T ss_dssp -------------CSCHHHHHHHHHH-TT--CEEEEEECTTSCG---------------GGTGGGG----GGCSEEEEES
T ss_pred -------------chhHHHHHHHHHH-cC--CCEEEEEcCCCCH---------------HHHHHHh----ccCCeEEEee
Confidence 1246778888875 55 5799999996421 1122222 3467653 3
Q ss_pred -ccCC-----CHHHHHHHHHHHHHcCCCCc--EEeeecccCCHHHHH
Q 008423 165 -QLFY-----DTDMFLKFVNDCRQIGITCP--IVPGIMPINNYKGFL 203 (566)
Q Consensus 165 -Qlff-----D~d~f~~f~~~~R~~Gi~vP--IIpGImPI~s~~~~~ 203 (566)
.+-| ..+.+.+ ++++|+.+.++| |-.||-| .+.+.+.
T Consensus 143 v~pGf~Gq~f~~~~l~k-i~~lr~~~~~~~I~VdGGI~~-~t~~~~~ 187 (228)
T 3ovp_A 143 VEPGFGGQKFMEDMMPK-VHWLRTQFPSLDIEVDGGVGP-DTVHKCA 187 (228)
T ss_dssp SCTTTCSCCCCGGGHHH-HHHHHHHCTTCEEEEESSCST-TTHHHHH
T ss_pred ecCCCCCcccCHHHHHH-HHHHHHhcCCCCEEEeCCcCH-HHHHHHH
Confidence 2333 3344433 566776654444 5678864 5555544
No 269
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=29.06 E-value=2.6e+02 Score=29.91 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchH
Q 008423 66 HALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQ 145 (566)
Q Consensus 66 ~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~ 145 (566)
+.+..+.++|++-|. +.... +......++|+.+++.+++ ..|.+. +- . +
T Consensus 232 ~~a~~l~~aG~d~I~-id~a~-----------g~~~~~~~~v~~i~~~~p~-~~Vi~g-~v--~----t----------- 280 (490)
T 4avf_A 232 ERVAALVAAGVDVVV-VDTAH-----------GHSKGVIERVRWVKQTFPD-VQVIGG-NI--A----T----------- 280 (490)
T ss_dssp HHHHHHHHTTCSEEE-EECSC-----------CSBHHHHHHHHHHHHHCTT-SEEEEE-EE--C----S-----------
T ss_pred HHHHHHhhcccceEE-ecccC-----------CcchhHHHHHHHHHHHCCC-ceEEEe-ee--C----c-----------
Confidence 445566678988554 42111 1223578899999998864 344332 10 0 1
Q ss_pred HHHHHHHHHHHcCCcEEEec-----c----------CCCHHHHHHHHHHHHHcCCCCcEEe--eec
Q 008423 146 SDLLYLKKKVDAGADLIITQ-----L----------FYDTDMFLKFVNDCRQIGITCPIVP--GIM 194 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQ-----l----------ffD~d~f~~f~~~~R~~Gi~vPIIp--GIm 194 (566)
.+..++=++||||+|+.. . .-+.+.+.+..+.+++ ..+|||+ ||.
T Consensus 281 --~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~--~~iPVIa~GGI~ 342 (490)
T 4avf_A 281 --AEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEG--TGVPLIADGGIR 342 (490)
T ss_dssp --HHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT--TTCCEEEESCCC
T ss_pred --HHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhcc--CCCcEEEeCCCC
Confidence 122344457999999852 1 1133344444444443 3599998 775
No 270
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=28.96 E-value=3.1e+02 Score=28.11 Aligned_cols=152 Identities=13% Similarity=0.077 Sum_probs=93.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
..+.+++.+.+.++.+.|.+.+=+=-|-+.. .......++.|+.+|+..|+.+.|.+=+|= + .+.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~--------~~~~~~d~~~v~avR~a~G~~~~L~vDaN~-~----~~~-- 207 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQGFKGHSIKIGASEA--------EGGPALDAERITACLADRQPGEWYLADANN-G----LTV-- 207 (386)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCCTT--------TTHHHHHHHHHHHHTTTCCTTCEEEEECTT-C----CCH--
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccCCCC--------CCCHHHHHHHHHHHHHHcCCCCeEEEECCC-C----CCH--
Confidence 4578888888888899999887643342211 122345778899999988877777665431 1 122
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCH
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPA 215 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~ 215 (566)
.+..++.+.++++.++.|=|++-|.+.+ .++++. ..+||..|=. +.+...+.++.+ .+.+-.|+
T Consensus 208 --------~~A~~~~~~l~~~~~i~iEeP~~~~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~~~~~a~d~v~~k 273 (386)
T 3fv9_G 208 --------EHALRMLSLLPPGLDIVLEAPCASWAET----KSLRAR-CALPLLLDEL-IQTETDLIAAIRDDLCDGVGLK 273 (386)
T ss_dssp --------HHHHHHHHHSCSSCCCEEECCCSSHHHH----HHHHTT-CCSCEEESTT-CCSHHHHHHHHHTTCCSEEEEE
T ss_pred --------HHHHHHHHHhhccCCcEEecCCCCHHHH----HHHHhh-CCCCEEeCCC-cCCHHHHHHHHHhCCCCEEEEC
Confidence 3455566666344455889999876554 334443 4689887754 667777776553 23333331
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
- .+-=|+.-+.+++....+.|++
T Consensus 274 ~--------------~~~GGit~~~~i~~~A~~~gi~ 296 (386)
T 3fv9_G 274 V--------------SKQGGITPMLRQRAIAAAAGMV 296 (386)
T ss_dssp H--------------HHHTSHHHHHHHHHHHHHTTCE
T ss_pred c--------------cccCCHHHHHHHHHHHHHcCCE
Confidence 1 2223677777777777777644
No 271
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=28.95 E-value=3.7e+02 Score=27.10 Aligned_cols=146 Identities=14% Similarity=0.079 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.+=+=-|.. .....+.|+.+|+..|+++.+.+=+|- + .+.
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~-------------~~~d~~~v~avR~a~g~~~~l~vDan~-~----~~~--- 196 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTG-------------IEADIARVKAIREAVGFDIKLRLDANQ-A----WTP--- 196 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------------HHHHHHHHHHHHHHHCTTSEEEEECTT-C----SCH---
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCC-------------HHHHHHHHHHHHHHcCCCCeEEEECCC-C----CCH---
Confidence 3678888888888889998875432321 134688899999999888888775431 1 122
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIP 214 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP 214 (566)
.+..++.+.++.---..|-|++- |.+.+ .++|+. ..+||..|=. +.+...+.++.+. +.+-.|
T Consensus 197 -------~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~ 263 (354)
T 3jva_A 197 -------KDAVKAIQALADYQIELVEQPVKRRDLEGL----KYVTSQ-VNTTIMADES-CFDAQDALELVKKGTVDVINI 263 (354)
T ss_dssp -------HHHHHHHHHTTTSCEEEEECCSCTTCHHHH----HHHHHH-CSSEEEESTT-CCSHHHHHHHHHHTCCSEEEE
T ss_pred -------HHHHHHHHHHHhcCCCEEECCCChhhHHHH----HHHHHh-CCCCEEEcCC-cCCHHHHHHHHHcCCCCEEEE
Confidence 33444555554422246789986 44443 334433 3589888744 7788777765432 222222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+- .+-=|+.-+.++++...++|++
T Consensus 264 k~--------------~~~GGit~~~~i~~~A~~~gi~ 287 (354)
T 3jva_A 264 KL--------------MKCGGIHEALKINQICETAGIE 287 (354)
T ss_dssp CH--------------HHHTSHHHHHHHHHHHHHTTCE
T ss_pred Cc--------------hhcCCHHHHHHHHHHHHHcCCe
Confidence 11 2223677777777777777644
No 272
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=28.94 E-value=87 Score=29.79 Aligned_cols=58 Identities=16% Similarity=0.302 Sum_probs=44.9
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
|++++. ..+-|..+.+++|++.-..+..-.++.+.+.+.+..|.+.|++=|.+..|-.
T Consensus 21 GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~a 79 (183)
T 1o4v_A 21 GSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGA 79 (183)
T ss_dssp SCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESS
T ss_pred ccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcc
Confidence 444443 3333444444799999999999999999999999999999999888887754
No 273
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=28.92 E-value=3.4e+02 Score=26.61 Aligned_cols=97 Identities=22% Similarity=0.215 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCcc
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNE 142 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~ 142 (566)
+......-++..|.+++.+|.-|.+-+ -..+..+.+.++ +.|. --++...||.+.. +.
T Consensus 126 ~~~~~~~~~~~~g~k~vaii~~~~~~g----------~~~~~~~~~~~~-~~g~-~vv~~~~~~~~~~---d~------- 183 (371)
T 4f06_A 126 NTVPAAKVAKQKGATKVAIAVSDYGPG----------IDAETAFKKTFE-AEGG-KVVEAVRMPLSTT---DF------- 183 (371)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSHHH----------HHHHHHHHHHHH-HTTC-EEEEEEEECTTCC---CC-------
T ss_pred hhhhhhhhhhhcCceEEEEEcCCcccc----------hhHHHHHHHHHH-hcCC-ceEEEEecCcccc---cH-------
Confidence 334444556889999999886443210 001122223333 3443 2466777886643 22
Q ss_pred chHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCC
Q 008423 143 SYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITC 187 (566)
Q Consensus 143 ~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~v 187 (566)
...+.+++ ++++|.|+.-+.+..+. ..|++.+++.|++.
T Consensus 184 --~~~l~~i~---~~~pd~v~~~~~~~~~~-~~~~~~~~~~g~~~ 222 (371)
T 4f06_A 184 --GPIMQRIK---NSGADMIFTFLPAGPPT-LGFVKAYIDNGLKA 222 (371)
T ss_dssp --HHHHHHHH---HHTCSEEEEECCTTHHH-HHHHHHHHHTTTTT
T ss_pred --HHHHHHHH---hcCCCEEEEEeccCchh-hHHHHHHHHhhhhc
Confidence 24555555 45999988766655444 46889999999763
No 274
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=28.69 E-value=4.3e+02 Score=26.02 Aligned_cols=156 Identities=11% Similarity=0.097 Sum_probs=90.5
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCC
Q 008423 57 TNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPD 136 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~ 136 (566)
..++.++....+..+.++|+..|.+-.+..|+.- + -+..+.++++.+++. . .-.+.+-. | +
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~----~---~~~d~~~~~~~~~~~-~-~~~~~~l~-~-------~-- 85 (302)
T 2ftp_A 25 QPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWV----P---QMAGSAEVFAGIRQR-P-GVTYAALA-P-------N-- 85 (302)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTC----G---GGTTHHHHHHHSCCC-T-TSEEEEEC-C-------S--
T ss_pred CCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccc----c---cccCHHHHHHHhhhc-C-CCEEEEEe-C-------C--
Confidence 3468888899999999999999998776555421 1 122344556665532 2 22333222 2 1
Q ss_pred CCCCccchHHHHHHHHHHHHcCCcEEEec-cCCCH--------------HHHHHHHHHHHHcCCCCcEEeeecccCCHHH
Q 008423 137 GVASNESYQSDLLYLKKKVDAGADLIITQ-LFYDT--------------DMFLKFVNDCRQIGITCPIVPGIMPINNYKG 201 (566)
Q Consensus 137 ~~~~~~~~~~dl~~Lk~KvdAGAdFiITQ-lffD~--------------d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~ 201 (566)
.+-+++-+++|++.|..= -.-|. +.+.+.++.+++.|+. |-..|+-+.+.
T Consensus 86 -----------~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~--V~~~l~~~~~~-- 150 (302)
T 2ftp_A 86 -----------LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR--VRGYISCVLGC-- 150 (302)
T ss_dssp -----------HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE--EEEEEECTTCB--
T ss_pred -----------HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe--EEEEEEEEeeC--
Confidence 234556677999976521 11121 4456778888888855 44444322110
Q ss_pred HHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcCC---chHHHHHHHHHcC
Q 008423 202 FLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLN---MEKSALAILLNLG 273 (566)
Q Consensus 202 ~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~GiHfyTlN---~e~~v~~IL~~l~ 273 (566)
|.. .+.|+ +.+.++++++.+.|++-|-+.... .++.+.++++.+.
T Consensus 151 ------------e~~-------~~~~~--------~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~ 198 (302)
T 2ftp_A 151 ------------PYD-------GDVDP--------RQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVA 198 (302)
T ss_dssp ------------TTT-------BCCCH--------HHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHT
T ss_pred ------------CcC-------CCCCH--------HHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHH
Confidence 100 12222 356677888888888888776533 5667777777663
No 275
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=28.29 E-value=2.2e+02 Score=29.58 Aligned_cols=47 Identities=28% Similarity=0.464 Sum_probs=33.7
Q ss_pred ccCCHHHHHHHHHHHHH-cCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHH
Q 008423 57 TNMPVEKIDHALQTIKS-NGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRS 112 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~-~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~ 112 (566)
..++.+++.+.+..+.+ .|++.|+.-+|||--..+ ..-.++++.+++
T Consensus 143 ~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d---------~~L~~il~~l~~ 190 (416)
T 2a5h_A 143 DSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSD---------ETLEYIIAKLRE 190 (416)
T ss_dssp SBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCH---------HHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCH---------HHHHHHHHHHHh
Confidence 35688999999998887 799999988888753210 013566777765
No 276
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=28.25 E-value=2e+02 Score=27.33 Aligned_cols=158 Identities=13% Similarity=0.106 Sum_probs=0.0
Q ss_pred CCchhHHHHHHHHHhhcCCceeEEeccccC--CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH
Q 008423 30 STADLTLDIANRMQNTICVETMMHLTCTNM--PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV 107 (566)
Q Consensus 30 ~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~--n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV 107 (566)
|+...+.+-++....-.|-...|.+.|... ....+.+.|..++++|++.|=+...+ +....+-+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~m~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~--------------~~~~~~~~ 69 (287)
T 3kws_A 4 SSKPANTAKGEKGSDKTGKDLELKLSFQEGIAPGESLNEKLDFMEKLGVVGFEPGGGG--------------LAGRVNEI 69 (287)
T ss_dssp -------------------CCCCEEEEETTSSCCSSHHHHHHHHHHTTCCEEECBSTT--------------CGGGHHHH
T ss_pred cCCCcccccccccCcccCCcceeeEEEEecccCCCCHHHHHHHHHHcCCCEEEecCCc--------------hHHHHHHH
Q ss_pred HHHHHHcCCceeEEEEecCCC--CCCCCCCCCCCCccchHHHHHHHHHHHHc----CCcEEEeccCCC------------
Q 008423 108 KHIRSAYGDYFGITVAGYPEG--HPDTIGPDGVASNESYQSDLLYLKKKVDA----GADLIITQLFYD------------ 169 (566)
Q Consensus 108 k~Ir~~~gd~F~IGVAgyPEg--Hpe~~~~~~~~~~~~~~~dl~~Lk~KvdA----GAdFiITQlffD------------ 169 (566)
+.+.+.+|-.+......++.- +++....+ ..++++++=++. ||.+++.-..|.
T Consensus 70 ~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~---------~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~ 140 (287)
T 3kws_A 70 KQALNGRNIKVSAICAGFKGFILSTDPAIRK---------ECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMET 140 (287)
T ss_dssp HHHHTTSSCEECEEECCCCSCTTBSSHHHHH---------HHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHH
T ss_pred HHHHHHcCCeEEEEecCCCCcCCCCCHHHHH---------HHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHH
Q ss_pred ----HHHHHHHHHHHHHcCCCCcEEee----ecccCCHHHHHHHhccCC
Q 008423 170 ----TDMFLKFVNDCRQIGITCPIVPG----IMPINNYKGFLRMTGFCK 210 (566)
Q Consensus 170 ----~d~f~~f~~~~R~~Gi~vPIIpG----ImPI~s~~~~~r~~~l~G 210 (566)
.+.+.+..+.+++.|+++=|-+- -..+.+...+.++.+-.+
T Consensus 141 ~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~ 189 (287)
T 3kws_A 141 RDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDIN 189 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcC
No 277
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=28.19 E-value=5e+02 Score=27.63 Aligned_cols=130 Identities=12% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHH---
Q 008423 37 DIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSA--- 113 (566)
Q Consensus 37 ~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~--- 113 (566)
+++..++. ++.+++. +++ +.+.+.+.+..+.++||++|+ -.+..+.|.++.+-++.||+.
T Consensus 191 ~~~~la~~-y~~~vV~-~~~---~l~~l~~lv~~a~~~Gi~~Ii------------LDP~~~~~~~sl~~~~~IR~~al~ 253 (445)
T 2h9a_A 191 QMVELAKK-YNVPLTV-SAK---GLDALAELVQKITALGYKNLI------------LDPQPENISEGLFYQTQIRRLAIK 253 (445)
T ss_dssp HHHHHHHH-HTCCEEE-ECS---SHHHHHHHHHHHHHTTCCCEE------------EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCeEEE-EcC---CHHHHHHHHHHHHHCCCCcEE------------EcCCchhHHHHHHHHHHHHHhhhc
Q ss_pred -cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHH--HHcCCcEEEeccCCCHHHHHHHHHHHHHc---CCCC
Q 008423 114 -YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKK--VDAGADLIITQLFYDTDMFLKFVNDCRQI---GITC 187 (566)
Q Consensus 114 -~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~K--vdAGAdFiITQlffD~d~f~~f~~~~R~~---Gi~v 187 (566)
.-..|..=+.+++-.- + ..++-+..= +.+||+.++|--+-....+--|.-+..=. -...
T Consensus 254 ~~d~~lg~P~i~~vs~~------d---------~~~ea~lA~~~~~~GasIl~~~~~~~~~rlp~~~lR~~i~tdp~~~~ 318 (445)
T 2h9a_A 254 KLFRPFGYPTIAFALDE------N---------PYQAVMEASVYIAKYAGIIVLNTVEPADILPLITLRLNIYTDPQKPI 318 (445)
T ss_dssp SCCGGGCSCBEEECCCS------S---------HHHHHHHHHHHHHTTCSEEEECCCCHHHHHHHHHHHHHHTSCTTSCC
T ss_pred CCCcccCCCeeecCCch------h---------HHHHHHHHHHHHHcCCeEEEecCccHHHhccHHHHhcccCCCCCCCc
Q ss_pred cEEeeecccCC
Q 008423 188 PIVPGIMPINN 198 (566)
Q Consensus 188 PIIpGImPI~s 198 (566)
.|-|||-+|.+
T Consensus 319 ~v~~~~y~~g~ 329 (445)
T 2h9a_A 319 AVEPKVYEILN 329 (445)
T ss_dssp BCCSSCEEESS
T ss_pred ccCCCceeCCC
No 278
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=28.08 E-value=95 Score=30.66 Aligned_cols=110 Identities=13% Similarity=0.033 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHH-------HHHHHHHcCCceeEEEEecCCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDL-------VKHIRSAYGDYFGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dL-------Vk~Ir~~~gd~F~IGVAgyPEgHpe~~~~ 135 (566)
.+++.|..+.+.||...++. +-+... .++. .-..+.++ +..+.+.+++.| +|+++.|-.+++
T Consensus 59 ~~~~~l~~m~~~GV~~~V~~-~~~~~~-~~~~----~~~~~~~~~~~~N~~~~~~~~~~p~r~-~~~~~l~~~~~~---- 127 (334)
T 2hbv_A 59 DPAFRIEEMDAQGVDVQVTC-ATPVMF-GYTW----EANKAAQWAERMNDFALEFAAHNPQRI-KVLAQVPLQDLD---- 127 (334)
T ss_dssp CHHHHHHHHHHHTCSEEEEE-ECGGGC-CTTS----CHHHHHHHHHHHHHHHHHHHTTCTTTE-EECBCCCTTSHH----
T ss_pred CHHHHHHHHHHCCCCEEEEC-CCchhc-cCCC----CHHHHHHHHHHHHHHHHHHHhhCCCeE-EEEEecCccCHH----
Confidence 35677888899999998877 433110 0110 11112222 222223566544 566666533221
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEE--Eec---cCCCHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLI--ITQ---LFYDTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFi--ITQ---lffD~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
....+++++. +.|+.-| -+. ..++-+.|..+.+.|.+.|+.+=|.++-
T Consensus 128 -------~a~~el~~~~---~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 128 -------LACKEASRAV---AAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp -------HHHHHHHHHH---HHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred -------HHHHHHHHHH---HcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 1113455544 4677643 222 2346678999999999998554445554
No 279
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=28.08 E-value=1.2e+02 Score=31.56 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCC-CCCCCCCCCCCCCccchHHHHHHHHHHHHc--CCcEEEeccCC------CHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPE-GHPDTIGPDGVASNESYQSDLLYLKKKVDA--GADLIITQLFY------DTDMF 173 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPE-gHpe~~~~~~~~~~~~~~~dl~~Lk~KvdA--GAdFiITQlff------D~d~f 173 (566)
..+.|+.||+..|+...|.+=+|-- +.....+. ++-++++++=.+. +-.+.|=|++- |.+.+
T Consensus 218 d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~~~---------~~a~~~~~~L~~~~~~i~~~iEqP~~~~~~~~d~~~~ 288 (413)
T 1kcz_A 218 LRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDI---------KAMADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAM 288 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCH---------HHHHHHHHHHHHHHTTSCEEEECSBCCSSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEecCCCcccccCCCH---------HHHHHHHHHHHhhcCCcceEEecCCCCCCCcccHHHH
Confidence 3466777877777666665544321 00000111 1223333332233 45778999995 56666
Q ss_pred HHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc
Q 008423 174 LKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG 207 (566)
Q Consensus 174 ~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~ 207 (566)
.++.++++++|..+||..|=. +.+...++++.+
T Consensus 289 ~~l~~~l~~~g~~ipIa~dE~-~~~~~~~~~~i~ 321 (413)
T 1kcz_A 289 RDLRAELDGRGVDAELVADEW-CNTVEDVKFFTD 321 (413)
T ss_dssp HHHHHHHHHHTCCEEEEECTT-CCSHHHHHHHHH
T ss_pred HHHHHhhhcCCCCCcEEeCCC-cCCHHHHHHHHH
Confidence 666666666788899999876 788888877653
No 280
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=28.01 E-value=63 Score=31.43 Aligned_cols=52 Identities=13% Similarity=0.174 Sum_probs=32.3
Q ss_pred HHHcCCcEEEeccCCC---------------HHHHHHHHHHHHHcCCCCcE-EeeecccCCHHHHHHHhc
Q 008423 154 KVDAGADLIITQLFYD---------------TDMFLKFVNDCRQIGITCPI-VPGIMPINNYKGFLRMTG 207 (566)
Q Consensus 154 KvdAGAdFiITQlffD---------------~d~f~~f~~~~R~~Gi~vPI-IpGImPI~s~~~~~r~~~ 207 (566)
=++||||||=|---|. ++...-+.+.++..|-.+|| ..| .|.+++.+..|.+
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaG--Girt~~~al~~i~ 204 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAG--GIRTREQAKAIVD 204 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEES--SCCSHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeC--CCCCHHHHHHHHH
Confidence 4478999999995554 12333344444555666776 445 6777877766544
No 281
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=28.01 E-value=2.1e+02 Score=23.52 Aligned_cols=60 Identities=12% Similarity=0.050 Sum_probs=38.8
Q ss_pred cHHHHHHHHHH--HcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHH
Q 008423 102 CALDLVKHIRS--AYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVND 179 (566)
Q Consensus 102 ~A~dLVk~Ir~--~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~ 179 (566)
.+.++++.||+ .+..--.|.++++.. .....+-+++||+-+++-++.+.+.+.+-++.
T Consensus 65 ~g~~~~~~lr~~~~~~~~pii~~s~~~~--------------------~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~ 124 (144)
T 3kht_A 65 NGFEVMSAVRKPGANQHTPIVILTDNVS--------------------DDRAKQCMAAGASSVVDKSSNNVTDFYGRIYA 124 (144)
T ss_dssp CHHHHHHHHHSSSTTTTCCEEEEETTCC--------------------HHHHHHHHHTTCSEEEECCTTSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcccccCCCEEEEeCCCC--------------------HHHHHHHHHcCCCEEEECCCCcHHHHHHHHHH
Confidence 37889999987 333222344443221 22344556799999999999888888776655
Q ss_pred HH
Q 008423 180 CR 181 (566)
Q Consensus 180 ~R 181 (566)
+-
T Consensus 125 ~l 126 (144)
T 3kht_A 125 IF 126 (144)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 282
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=27.95 E-value=2.2e+02 Score=25.49 Aligned_cols=96 Identities=13% Similarity=0.082 Sum_probs=65.3
Q ss_pred EEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCC
Q 008423 52 MHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPD 131 (566)
Q Consensus 52 ~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe 131 (566)
.++++.+.+...++.+-..+...|+.|+-++.||....-. ..+ .|.+-+...+..
T Consensus 65 ~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----~~~------------------~~D~i~~~~~~~--- 119 (204)
T 3e05_A 65 GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD----DLP------------------DPDRVFIGGSGG--- 119 (204)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT----TSC------------------CCSEEEESCCTT---
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh----cCC------------------CCCEEEECCCCc---
Confidence 4789999999999998888888999999999999754211 001 122323332221
Q ss_pred CCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCC
Q 008423 132 TIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGI 185 (566)
Q Consensus 132 ~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi 185 (566)
+ ++.-++.+.+.++.|..++++-+. .+...++.+.+++.|.
T Consensus 120 --~---------~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 120 --M---------LEEIIDAVDRRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGY 160 (204)
T ss_dssp --C---------HHHHHHHHHHHCCTTCEEEEEECB--HHHHHHHHHHHHHTTC
T ss_pred --C---------HHHHHHHHHHhcCCCeEEEEEecc--cccHHHHHHHHHHCCC
Confidence 1 225677788888889988886544 3566677788888885
No 283
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=27.59 E-value=4.9e+02 Score=26.27 Aligned_cols=116 Identities=15% Similarity=0.182 Sum_probs=73.7
Q ss_pred cCCHHHHHHHHHHH-----HHcCCCEEEEecCCCC--C-CCCCccccCCCccc-HHHHHHHHHHHcCCceeEEEEecCC-
Q 008423 58 NMPVEKIDHALQTI-----KSNGIQNVLALRGDPP--H-GQDKFVQIQGGFAC-ALDLVKHIRSAYGDYFGITVAGYPE- 127 (566)
Q Consensus 58 d~n~~~L~~~L~~a-----~~~GIrNILaLrGDpp--~-~~~~~~~~~~~F~~-A~dLVk~Ir~~~gd~F~IGVAgyPE- 127 (566)
+.|.+.+.+.+..+ +++|++-|++=-|=.. + ....|.+.+..|.. -..|+++|++ .| +.+|+=..|+
T Consensus 22 ~~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~-~G--lk~Giw~~~~~ 98 (362)
T 1uas_A 22 GINEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHA-KG--LKLGIYSDAGS 98 (362)
T ss_dssp CCCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHH-TT--CEEEEEEESSS
T ss_pred CCCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHH-CC--CEeEEEeeCCC
Confidence 67999999999999 8899988875111000 0 11235444556877 7789999987 45 4555555554
Q ss_pred -----CCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCC-----HHHHHHHHHHHHHcCCCC
Q 008423 128 -----GHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYD-----TDMFLKFVNDCRQIGITC 187 (566)
Q Consensus 128 -----gHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD-----~d~f~~f~~~~R~~Gi~v 187 (566)
+||.+... .+.+.+.++ +.|.|||=+=+++. .+.+.++.+.+++.|-.+
T Consensus 99 ~~~~~~~pg~~~~--------~~~~~~~~~---~wGvdyvK~D~~~~~~~~~~~~y~~~~~al~~~~~~i 157 (362)
T 1uas_A 99 QTCSNKMPGSLDH--------EEQDVKTFA---SWGVDYLKYDNCNDAGRSVMERYTRMSNAMKTYGKNI 157 (362)
T ss_dssp BCTTSSSBCCTTC--------HHHHHHHHH---HHTCCEEEEECCCCTTCCHHHHHHHHHHHHHHHCTTS
T ss_pred ccccCCCCCchhH--------HHHHHHHHH---HcCCCEEEECccCCCCCCHHHHHHHHHHHHHhhCCCc
Confidence 33432221 123333332 56999998888875 466788888888888554
No 284
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=27.58 E-value=4.3e+02 Score=27.06 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCC----------------c--------ccc-----C--CCcccHHHHH
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDK----------------F--------VQI-----Q--GGFACALDLV 107 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~----------------~--------~~~-----~--~~F~~A~dLV 107 (566)
.+++...+.+++|.++|++-| .|+-|.|..+.+ + ... . .......+.|
T Consensus 143 ~d~~~~~~~~~ra~~aG~~ai-~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i 221 (368)
T 2nli_A 143 KDDQQNRDILDEAKSDGATAI-ILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDI 221 (368)
T ss_dssp SSHHHHHHHHHHHHHTTCSCE-EEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEE-EEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHH
Confidence 356777788899999998755 466665432110 0 000 0 0122356668
Q ss_pred HHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe------ccCCCHHHHHHHHHHHH
Q 008423 108 KHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT------QLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 108 k~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT------QlffD~d~f~~f~~~~R 181 (566)
+.||+..+-.+.+. +. + +. ++. ++=+++|||+|+. |+-.-...+ ..+..++
T Consensus 222 ~~lr~~~~~PvivK--~v---~----~~----------e~a---~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~ 278 (368)
T 2nli_A 222 EEIAGHSGLPVFVK--GI---Q----HP----------EDA---DMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIA 278 (368)
T ss_dssp HHHHHHSSSCEEEE--EE---C----SH----------HHH---HHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHH
T ss_pred HHHHHHcCCCEEEE--cC---C----CH----------HHH---HHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHH
Confidence 88988765334443 21 1 11 233 2334789999886 543322222 4444444
Q ss_pred H-cCCCCcEEeeecccCCHHHHHHHhccCC---CCCCHHHHHHh
Q 008423 182 Q-IGITCPIVPGIMPINNYKGFLRMTGFCK---TKIPAEITAAL 221 (566)
Q Consensus 182 ~-~Gi~vPIIpGImPI~s~~~~~r~~~l~G---v~VP~~il~~L 221 (566)
+ .+-++|||.- =.|.+...+.++.. +| +-|-..++..+
T Consensus 279 ~~v~~~ipVia~-GGI~~g~D~~kala-lGAd~V~iGr~~l~~~ 320 (368)
T 2nli_A 279 ERVNKRVPIVFD-SGVRRGEHVAKALA-SGADVVALGRPVLFGL 320 (368)
T ss_dssp HHHTTSSCEEEC-SSCCSHHHHHHHHH-TTCSEEEECHHHHHHH
T ss_pred HHhCCCCeEEEE-CCCCCHHHHHHHHH-cCCCEEEECHHHHHHH
Confidence 3 2325787642 24556666555443 33 34555565544
No 285
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=27.51 E-value=4.7e+02 Score=26.01 Aligned_cols=40 Identities=5% Similarity=0.102 Sum_probs=25.4
Q ss_pred HHHHHHHHHHc-CCcEEEeccCCCHHHHHHHHHHHHHcCCCCc
Q 008423 147 DLLYLKKKVDA-GADLIITQLFYDTDMFLKFVNDCRQIGITCP 188 (566)
Q Consensus 147 dl~~Lk~KvdA-GAdFiITQlffD~d~f~~f~~~~R~~Gi~vP 188 (566)
|...+..|+++ +++.||- +...+....+++++++.|++.+
T Consensus 173 d~~~~l~~ik~~~~~vii~--~~~~~~~~~i~~qa~~~g~~~~ 213 (389)
T 3o21_A 173 EFRRIIEEMDRRQEKRYLI--DCEVERINTILEQVVILGKHSR 213 (389)
T ss_dssp HHHHHHHHHHTTTCCEEEE--ESCHHHHHHHHHHHHHHCSCST
T ss_pred HHHHHHHHHHhCCCeEEEE--ECCHHHHHHHHHHHHHcCcccC
Confidence 44444455443 6787775 3344566778888888887654
No 286
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=27.41 E-value=94 Score=28.97 Aligned_cols=67 Identities=15% Similarity=0.116 Sum_probs=42.1
Q ss_pred CCcCEEEecCCCCCCCchhHHHHHHHHHhhcCCcee-EEecccc----------------CCHHHHHHHHHHHHHcCCCE
Q 008423 16 TTRHSATSRWGAGGSTADLTLDIANRMQNTICVETM-MHLTCTN----------------MPVEKIDHALQTIKSNGIQN 78 (566)
Q Consensus 16 ~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i-~HLTCrd----------------~n~~~L~~~L~~a~~~GIrN 78 (566)
..-+.|-+.. +.+. ..-++.+.++ ..|+.+. .|....+ ...+.++..+..|+++|++.
T Consensus 27 ~G~~~vEl~~-~~~~---~~~~~~~~l~-~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (260)
T 1k77_A 27 AGFDAVEFLF-PYNY---STLQIQKQLE-QNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQ 101 (260)
T ss_dssp HTCSEEECSC-CTTS---CHHHHHHHHH-HTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred hCCCEEEecC-CCCC---CHHHHHHHHH-HcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCCE
Confidence 3446676654 3221 2334445555 5899987 5653211 12357888899999999999
Q ss_pred EEEecCCCC
Q 008423 79 VLALRGDPP 87 (566)
Q Consensus 79 ILaLrGDpp 87 (566)
|.+..|..+
T Consensus 102 v~~~~g~~~ 110 (260)
T 1k77_A 102 VHVMAGVVP 110 (260)
T ss_dssp EECCCCBCC
T ss_pred EEECcCCCC
Confidence 988777654
No 287
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=27.14 E-value=3.6e+02 Score=26.14 Aligned_cols=45 Identities=20% Similarity=0.206 Sum_probs=31.7
Q ss_pred HHHHHHHHHHH----cCCcEEEeccCCC---HHHHHHHHHHHHHcCCCCcEE
Q 008423 146 SDLLYLKKKVD----AGADLIITQLFYD---TDMFLKFVNDCRQIGITCPIV 190 (566)
Q Consensus 146 ~dl~~Lk~Kvd----AGAdFiITQlffD---~d~f~~f~~~~R~~Gi~vPII 190 (566)
.+++.+.+.+. ..++.+++++..+ .+.+.++++.++++|..+||+
T Consensus 60 ~~i~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv 111 (312)
T 2yxt_A 60 DELQELYEGLRLNNMNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYV 111 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHhcCCccCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEE
Confidence 44555444432 3688999999888 445558899999999877765
No 288
>3gaa_A Uncharacterized protein TA1441; the protein with unknown function from thermoplasma acidophi structural genomics,PSI, MCSG; 2.70A {Thermoplasma acidophilum}
Probab=27.06 E-value=3.5e+02 Score=26.21 Aligned_cols=169 Identities=18% Similarity=0.133 Sum_probs=89.0
Q ss_pred chhHHHHHHHHHhhcCCceeEEeccccCCHHHH-HH-HH---HHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHH
Q 008423 32 ADLTLDIANRMQNTICVETMMHLTCTNMPVEKI-DH-AL---QTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDL 106 (566)
Q Consensus 32 ~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L-~~-~L---~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dL 106 (566)
...+++ +.++.+.++.+.+.++.|........ ++ .+ .+.+...=+++++|.||-|... ..-...+..+
T Consensus 38 ~vg~lA-~~hLi~~l~~~~vg~id~~~lPp~v~~~dg~~~~P~~ly~~~~~~llll~g~~p~p~------~~~~~f~~~v 110 (252)
T 3gaa_A 38 PTGVLA-ASYIVETLGMHQVAHLISQHIPPVAVFVGGKLRHPFRIYANNSNTVLVAMCEVPISS------AHIYEISNTL 110 (252)
T ss_dssp SHHHHH-HHHHHHHHTCEEEEECCCTTSCCCEECGGGCCBCSEEEEECTTSCEEEEEESSCCCG------GGHHHHHHHH
T ss_pred HHHHHH-HHHHHHHcCCeEEEEEecCCCCcEEEeCCCeEecceEEEEECCCCEEEEEecCCCCh------HHHHHHHHHH
Confidence 344555 44555568999999998876632211 11 00 0011112378999999975321 1223457778
Q ss_pred HHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCC
Q 008423 107 VKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 107 Vk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~ 186 (566)
+..+++ +|-..-|...|+|-+|+..... .... +-+..++.++ +.|+.+.-. ..=....--++..|.++|++
T Consensus 111 l~~~~~-~gv~~vv~Lgg~~~~~~~~~p~--v~~~-t~~~l~~~l~---~~g~~~~~~--g~i~G~~g~Ll~~~~~~gi~ 181 (252)
T 3gaa_A 111 MNWIDQ-VGASEIVIMEGSPANGIPEERP--VFAV-AEKPKLDKFK---KAGIQPADS--AIIAGMGGGILNECLVRKIT 181 (252)
T ss_dssp HHHHHH-HTCSEEEEEEEEEESCCCSSCC--CEEE-CCHHHHHHHH---HTTCEECCC--SEECHHHHHHHHHHHHHTCE
T ss_pred HHHHHH-cCCCEEEEEecccCCCCCCCCc--eEEE-cCHHHHHHHH---hcCCcccCC--CCcCCHHHHHHHHHHHcCCC
Confidence 887765 6656677777777777432111 0011 1112222222 356655422 22224444556678888975
Q ss_pred CcE----Eeeeccc--CCHHHHHHHhccCCCCCCHH
Q 008423 187 CPI----VPGIMPI--NNYKGFLRMTGFCKTKIPAE 216 (566)
Q Consensus 187 vPI----IpGImPI--~s~~~~~r~~~l~Gv~VP~~ 216 (566)
.=. +|+-.|- .+..-+..+.++.|+.||-+
T Consensus 182 a~~l~~~vp~y~pdP~AA~~lL~~l~~~~gl~i~~~ 217 (252)
T 3gaa_A 182 GLSFITPTSVDIPDPGAVLSIIEAINKAYNLKIKTD 217 (252)
T ss_dssp EEEEEEEEESSSCCHHHHHHHHHHHHHHHCCCCCCT
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCCCHH
Confidence 322 2333321 22234556678889999954
No 289
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=26.93 E-value=53 Score=33.17 Aligned_cols=54 Identities=13% Similarity=0.076 Sum_probs=33.2
Q ss_pred HHHHHHcCCcEEEeccCCC-----HHHHHHHHHHHHHc-------CCCCcE-EeeecccCCHHHHHHHh
Q 008423 151 LKKKVDAGADLIITQLFYD-----TDMFLKFVNDCRQI-------GITCPI-VPGIMPINNYKGFLRMT 206 (566)
Q Consensus 151 Lk~KvdAGAdFiITQlffD-----~d~f~~f~~~~R~~-------Gi~vPI-IpGImPI~s~~~~~r~~ 206 (566)
-+-=++||||||=|---|. ++...-+.+.+|+. |-.++| ..| .|.+++.+..|.
T Consensus 178 ~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaG--GIrt~e~al~~i 244 (281)
T 2a4a_A 178 TLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSG--GISDLNTASHYI 244 (281)
T ss_dssp HHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEES--SCCSHHHHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeC--CCCCHHHHHHHH
Confidence 3445579999999996664 22333344445433 666776 344 566887776654
No 290
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=26.75 E-value=2e+02 Score=28.44 Aligned_cols=111 Identities=16% Similarity=0.215 Sum_probs=59.0
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCccc-------HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 66 HALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFAC-------ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 66 ~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~-------A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
..|..+.+.||...+++..++.. . ++ .+.... ..+.+..+.+.+++.| +|++..|-. +. .+.+
T Consensus 53 ~~l~~md~~GV~~~vl~~~~~~~-~-~~---~~~~~~~~~~~~~~N~~~~~~~~~~p~rf-~~~~~~p~~-~~-~~~~-- 122 (350)
T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFM-A-HH---IGDFNVSSTWAAICNELCYRVSQLFPDNF-IGAAMLPQS-PG-VDPK-- 122 (350)
T ss_dssp THHHHHHHHTCCEEEEECCC------------CCHHHHHHHHHHHHHHHHHHHHHSTTTE-EEEEECCCC-TT-SCGG--
T ss_pred HHHHHHHHcCCeEEEEcCCchhh-c-cc---cCCHHHHHHHHHHHHHHHHHHHHhCCCcE-EEEEeCCCC-CC-CCHH--
Confidence 55788899999999988544321 0 10 011111 2222323334577654 678887742 11 0111
Q ss_pred CCccchHHHHHHHHHHHHcCCcEEEeccC----------CCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 139 ASNESYQSDLLYLKKKVDAGADLIITQLF----------YDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~KvdAGAdFiITQlf----------fD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
....+++++.+ +.|+.-|-..+- .+-+.|..+.+.|.+.|+.+=|.+|
T Consensus 123 ----~a~~eL~r~~~--~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~ 180 (350)
T 2gwg_A 123 ----TCIPELEKCVK--EYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVS 180 (350)
T ss_dssp ----GGHHHHHHHHH--TSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCC
T ss_pred ----HHHHHHHHHHh--ccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCC
Confidence 11245555543 358777654331 3556788999999999844333344
No 291
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=26.75 E-value=3.3e+02 Score=27.76 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHcCCC--eEEE
Q 008423 235 GIHLGAEMCKKILAHGIK--TLHL 256 (566)
Q Consensus 235 Gv~la~e~i~~L~~~Gv~--GiHf 256 (566)
-.+...+.++.+.+.|++ -|-+
T Consensus 175 v~~~l~~~i~~a~~~GI~~~~Iil 198 (314)
T 3tr9_A 175 VKKELQESIQRCKKAGISEDRIII 198 (314)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred HHHHHHHHHHHHHHcCCCHhHEEE
Confidence 345667778888888876 4544
No 292
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=26.68 E-value=1.6e+02 Score=25.32 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=63.8
Q ss_pred eEEeccccCCHHHHHHHHHHHHHcCCC-EEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCC
Q 008423 51 MMHLTCTNMPVEKIDHALQTIKSNGIQ-NVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGH 129 (566)
Q Consensus 51 i~HLTCrd~n~~~L~~~L~~a~~~GIr-NILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgH 129 (566)
-.++++.+.+...++..-..+...|+. ++ .+.||.... ... ....|.+-+..++-.|
T Consensus 49 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~---~~~------------------~~~~~D~i~~~~~~~~ 106 (178)
T 3hm2_A 49 QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA---FDD------------------VPDNPDVIFIGGGLTA 106 (178)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG---GGG------------------CCSCCSEEEECC-TTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh---hhc------------------cCCCCCEEEECCcccH
Confidence 468899999999999888888899998 88 788886431 100 0012444444544444
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCC
Q 008423 130 PDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGIT 186 (566)
Q Consensus 130 pe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~ 186 (566)
. .-++.+.+.++.|..++++-+.. +....+.+.+++.|.+
T Consensus 107 ------~---------~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~~~~~~~~ 146 (178)
T 3hm2_A 107 ------P---------GVFAAAWKRLPVGGRLVANAVTV--ESEQMLWALRKQFGGT 146 (178)
T ss_dssp ------T---------THHHHHHHTCCTTCEEEEEECSH--HHHHHHHHHHHHHCCE
T ss_pred ------H---------HHHHHHHHhcCCCCEEEEEeecc--ccHHHHHHHHHHcCCe
Confidence 1 45778888888899888876544 4445566666666643
No 293
>4es1_A BH0342 protein; ferredoxin, nuclease, hydrolase; 1.10A {Bacillus halodurans} PDB: 4es2_A 4es3_A
Probab=26.38 E-value=99 Score=26.36 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=36.6
Q ss_pred eeeeeeeeecChhhHHHHHHhhc-----CCCceeEEEEcCCCCccccCCCCCCcceeecccCCCcc
Q 008423 437 YQKAYLEFFCSPEKLTALVDKSK-----ALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEI 497 (566)
Q Consensus 437 yQKay~Eff~~~~~~~~l~~~~~-----~~~~~~y~a~n~~g~~~~n~~~~~~navTWGvFpg~ei 497 (566)
=|++=.|+.+++.++.+|..+|. ...+|-+|-...+... ...++|.-|+.++
T Consensus 38 vQ~SVFe~~lt~~~~~~L~~~l~~~id~~~Dsv~iy~l~~~~~~---------~~~~iG~~~~~d~ 94 (100)
T 4es1_A 38 VQNSVFECIVDSTQLTSLKLELTSLIDEEKDSLRIYRLGNNYKT---------KVEHIGAKPSIDL 94 (100)
T ss_dssp EETTEEEEEECHHHHHHHHHHHHHHSCTTTCEEEEEEECCCSSC---------CCCCCSCCCC---
T ss_pred heeeEEEEEcCHHHHHHHHHHHHhhcCCCCCEEEEEEcCCCccc---------eEEEECCCCCCCC
Confidence 39999999999999999888775 3468999988766532 2345566555443
No 294
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=26.35 E-value=3.3e+02 Score=27.90 Aligned_cols=152 Identities=14% Similarity=0.057 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCc-ccHHHHHHHHHHHcCCceeEEEEecCCCCCCCC--CC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGF-ACALDLVKHIRSAYGDYFGITVAGYPEGHPDTI--GP 135 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F-~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~--~~ 135 (566)
.+.+++.+...++.+.|.+.|=+= +. |.+ +.+ ....+.|+.||+..|+.+.|.+=++ .+ . +.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik-~s-pvG--------~~~~~~~~e~v~avr~a~G~d~~l~vDan-~~----~~~~~ 208 (401)
T 2hzg_A 144 DTPQETLERARAARRDGFAAVKFG-WG-PIG--------RGTVAADADQIMAAREGLGPDGDLMVDVG-QI----FGEDV 208 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEE-ST-TTT--------SSCHHHHHHHHHHHHHHHCSSSEEEEECT-TT----TTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEc-CC-CCC--------CCHHHHHHHHHHHHHHHhCCCCeEEEECC-CC----CCCCH
Confidence 467788888888889999887642 21 111 123 4578899999999887788887553 11 1 21
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCC
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKI 213 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~V 213 (566)
++-++.+++=-+.|.++ |-|++- .+.+ ....++++....+||+.+=. +.+...+.++.+ .+.+-.
T Consensus 209 ---------~~a~~~~~~l~~~~i~~-iEqP~~-~~d~-~~~~~l~~~~~~iPI~~dE~-~~~~~~~~~~i~~~~~d~v~ 275 (401)
T 2hzg_A 209 ---------EAAAARLPTLDAAGVLW-LEEPFD-AGAL-AAHAALAGRGARVRIAGGEA-AHNFHMAQHLMDYGRIGFIQ 275 (401)
T ss_dssp ---------HHHHTTHHHHHHTTCSE-EECCSC-TTCH-HHHHHHHTTCCSSEEEECTT-CSSHHHHHHHHHHSCCSEEE
T ss_pred ---------HHHHHHHHHHHhcCCCE-EECCCC-ccCH-HHHHHHHhhCCCCCEEecCC-cCCHHHHHHHHHCCCCCEEE
Confidence 12233333322467776 579875 2222 22344554134688876643 566777666543 222222
Q ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 214 PAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 214 P~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
++- .+-=|+.-+.++++...+.|++
T Consensus 276 ik~--------------~~~GGit~~~~i~~~A~~~g~~ 300 (401)
T 2hzg_A 276 IDC--------------GRIGGLGPAKRVADAAQARGIT 300 (401)
T ss_dssp ECH--------------HHHTSHHHHHHHHHHHHHHTCE
T ss_pred eCc--------------chhCCHHHHHHHHHHHHHcCCE
Confidence 210 1222566677777777777644
No 295
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=26.06 E-value=65 Score=32.36 Aligned_cols=60 Identities=12% Similarity=0.133 Sum_probs=45.8
Q ss_pred CEEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 008423 19 HSATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH 88 (566)
Q Consensus 19 ~fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~ 88 (566)
..+++.-|+||. |+.+|..+.. --++++.|.+...++..-..++.+|+.||-++.||...
T Consensus 105 ~VLDlcaG~G~k----t~~la~~~~~------~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~ 164 (309)
T 2b9e_A 105 HVIDACAAPGNK----TSHLAALLKN------QGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 164 (309)
T ss_dssp EEEESSCTTCHH----HHHHHHHHTT------CSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred EEEEeCCChhHH----HHHHHHHhCC------CCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHh
Confidence 355666666554 6677766543 13789999999999999889999999999999999653
No 296
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=26.02 E-value=75 Score=32.50 Aligned_cols=110 Identities=16% Similarity=0.242 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHH--------HHHHHHcCCceeEEEEecCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLV--------KHIRSAYGDYFGITVAGYPEGHPDTIG 134 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLV--------k~Ir~~~gd~F~IGVAgyPEgHpe~~~ 134 (566)
..+..|....+.||..-++.-+-+.... ..-..+.++. +.+ +.+++.| +|+|.-|-.+|+
T Consensus 74 ~~~~rl~~MD~~GI~~~Vls~~~~~~~~-------~~~~~a~~~~r~~Nd~l~~~~-~~~P~Rf-~g~a~v~~~~~~--- 141 (357)
T 3nur_A 74 HHDERIQFMNNQDVQIQVLSYGNGSPSN-------LVGQKAIELCQKANDQLANYI-AQYPNRF-VGFATLPINEPE--- 141 (357)
T ss_dssp CHHHHHHHHHHTTEEEEEEEECTTCGGG-------SCHHHHHHHHHHHHHHHHHHH-HHSTTTE-EECBCCCTTSHH---
T ss_pred CHHHHHHHHHHCCCcEEEEeCCCCcccc-------CCHHHHHHHHHHHHHHHHHHH-HhCCCEE-EEEEeCCCCCHH---
Confidence 3467788889999987554323221100 0001122222 223 3577654 677776643321
Q ss_pred CCCCCCccchHHHHHHHHHHH-HcCCcEEE-----eccCCCHHHHHHHHHHHHHcCCCCcEEeeecc
Q 008423 135 PDGVASNESYQSDLLYLKKKV-DAGADLII-----TQLFYDTDMFLKFVNDCRQIGITCPIVPGIMP 195 (566)
Q Consensus 135 ~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI-----TQlffD~d~f~~f~~~~R~~Gi~vPIIpGImP 195 (566)
.-++.|++=+ +.|+.-|. .+..+|-..+..+.+.|.+.|+.+=|.+|-.|
T Consensus 142 -----------~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~~~ 197 (357)
T 3nur_A 142 -----------AAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVN 197 (357)
T ss_dssp -----------HHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred -----------HHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCCCC
Confidence 2344455533 46765332 13456778899999999999966666777654
No 297
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=26.00 E-value=5.2e+02 Score=26.06 Aligned_cols=187 Identities=13% Similarity=0.113 Sum_probs=105.3
Q ss_pred HHHHHHHHHhhc-CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-cCCCcccHHHHHHHHHH
Q 008423 35 TLDIANRMQNTI-CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ-IQGGFACALDLVKHIRS 112 (566)
Q Consensus 35 Sl~la~~lq~~~-Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~-~~~~F~~A~dLVk~Ir~ 112 (566)
-+..+..+.+.. .++++.=+-.---+.+.+.+....+.++|+.-|-+=-...|+.-.+-.. .--..+..++=|+.+++
T Consensus 67 m~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~ 146 (302)
T 3fa4_A 67 MRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQ 146 (302)
T ss_dssp HHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHH
Confidence 334444554432 6677776665323677788888888899999888444433331101000 01122334444555443
Q ss_pred H---cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcE
Q 008423 113 A---YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPI 189 (566)
Q Consensus 113 ~---~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPI 189 (566)
. .+.+|.|-+-.--.. ...+++-++|++.=++||||-|.---.-+.+.+.++++.+. .+|+
T Consensus 147 A~~~~~~d~~I~ARTDa~~------------~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~----~~Pl 210 (302)
T 3fa4_A 147 ARQRIGSDIVVIARTDSLQ------------THGYEESVARLRAARDAGADVGFLEGITSREMARQVIQDLA----GWPL 210 (302)
T ss_dssp HHHHHTCCCEEEEEECCHH------------HHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT----TSCE
T ss_pred HHHhcCCCEEEEEEecccc------------cCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc----CCce
Confidence 2 355677654432111 01234679999999999999888877889999888877764 2677
Q ss_pred Eeeec-----ccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 190 VPGIM-----PINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 190 IpGIm-----PI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
..-++ |..+.+.+..+ -+.-+..|..++.. .+.-+.+..++|++.|..
T Consensus 211 ~~n~~~~g~~p~~~~~eL~~l-Gv~~v~~~~~~~ra--------------a~~A~~~~~~~i~~~g~~ 263 (302)
T 3fa4_A 211 LLNMVEHGATPSISAAEAKEM-GFRIIIFPFAALGP--------------AVAAMREAMEKLKRDGIP 263 (302)
T ss_dssp EEECCTTSSSCCCCHHHHHHH-TCSEEEETTTTHHH--------------HHHHHHHHHHHHHHHSSC
T ss_pred eEEEecCCCCCCCCHHHHHHc-CCCEEEEchHHHHH--------------HHHHHHHHHHHHHHcCCC
Confidence 65443 45566666542 22223445443322 233445666777776643
No 298
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=26.00 E-value=1.1e+02 Score=30.04 Aligned_cols=114 Identities=8% Similarity=0.060 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccC---CCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQ---GGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~---~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
.++..|..+.+.||...+++ +-+... .++.... .......+.+..+.+.+++.| +|+++-|-.++
T Consensus 55 ~~~~~l~~m~~~GV~~~v~~-~~~~~~-~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~-~~~~~l~~~~~--------- 122 (336)
T 2wm1_A 55 DPEVRIREMDQKGVTVQALS-TVPVMF-SYWAKPEDTLNLCQLLNNDLASTVVSYPRRF-VGLGTLPMQAP--------- 122 (336)
T ss_dssp CHHHHHHHHHHHTCCEEEEE-CCGGGG-CTTSCHHHHHHHHHHHHHHHHHHHHHSTTTE-EEEECCCTTSH---------
T ss_pred CHHHHHHHHHHCCCCEEEEC-CCchhh-cccCCHHHHHHHHHHHHHHHHHHHHhccCce-eEEEeCCCcCH---------
Confidence 35677788889999998877 332110 0110000 000011222222334577644 67765542221
Q ss_pred CccchHHHHHHHHHHH-HcCCcEEEec-----cCCCHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 140 SNESYQSDLLYLKKKV-DAGADLIITQ-----LFYDTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~Kv-dAGAdFiITQ-----lffD~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
+.-++.|++=+ +.|+.-|.-. ..++-+.|..+.+.|.+.|+.+=|.++-
T Consensus 123 -----~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 123 -----ELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp -----HHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred -----HHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 12234444444 3587766222 2245577899999999998544344553
No 299
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=25.96 E-value=2.4e+02 Score=28.50 Aligned_cols=144 Identities=11% Similarity=-0.010 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|+ ......+.|+.+|+..|+.+.|.+=++ .+ .+.
T Consensus 145 ~~~~~~~~~a~~~~~~Gf~~iKik~g~-------------~~~~~~e~v~avr~a~g~~~~l~vDan-~~----~~~--- 203 (371)
T 2ps2_A 145 GEPEDMRARVAKYRAKGYKGQSVKISG-------------EPVTDAKRITAALANQQPDEFFIVDAN-GK----LSV--- 203 (371)
T ss_dssp CCHHHHHHHHHHHHTTTCCEEEEECCS-------------CHHHHHHHHHHHTTTCCTTCEEEEECT-TB----CCH---
T ss_pred CCHHHHHHHHHHHHHhChheEEeecCC-------------CHHHHHHHHHHHHHhcCCCCEEEEECC-CC----cCH---
Confidence 367788888888889999887643332 134578889999988888788877654 11 122
Q ss_pred CCccchHHHHHHHHHHH--HcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCC
Q 008423 139 ASNESYQSDLLYLKKKV--DAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIP 214 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kv--dAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP 214 (566)
.+..++.+++ +.|. .|-|++-|.+.+ .++++. ..+||..+= -+.+...+.++.+ .+.+-.+
T Consensus 204 -------~~a~~~~~~l~~~~~i--~iE~P~~~~~~~----~~l~~~-~~iPI~~dE-~~~~~~~~~~~i~~~~~d~v~i 268 (371)
T 2ps2_A 204 -------ETALRLLRLLPHGLDF--ALEAPCATWREC----ISLRRK-TDIPIIYDE-LATNEMSIVKILADDAAEGIDL 268 (371)
T ss_dssp -------HHHHHHHHHSCTTCCC--EEECCBSSHHHH----HHHHTT-CCSCEEEST-TCCSHHHHHHHHHHTCCSEEEE
T ss_pred -------HHHHHHHHHHHhhcCC--cCcCCcCCHHHH----HHHHhh-CCCCEEeCC-CcCCHHHHHHHHHhCCCCEEEe
Confidence 3344444454 3576 789999855443 444443 468987764 4577777766533 2332222
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+- .+-=|+.-+.++++...++|++
T Consensus 269 k~--------------~~~GGit~~~~i~~~A~~~g~~ 292 (371)
T 2ps2_A 269 KI--------------SKAGGLTRGRRQRDICLAAGYS 292 (371)
T ss_dssp EH--------------HHHTSHHHHHHHHHHHHHHTCE
T ss_pred ch--------------hhcCCHHHHHHHHHHHHHcCCe
Confidence 11 2222677777777777777643
No 300
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=25.72 E-value=1.6e+02 Score=27.27 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCcc
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNE 142 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~ 142 (566)
...+.+..+.+.|++-|.+.--+. .+ .......++++.+++..+ ..+-+.++.. +.
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~--~~-------~~~~~~~~~i~~i~~~~~--ipvi~~g~i~------~~------- 89 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITA--AP-------EGRATFIDSVKRVAEAVS--IPVLVGGGVR------SL------- 89 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCC--CT-------TTHHHHHHHHHHHHHHCS--SCEEEESSCC------SH-------
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCc--cc-------cCCcccHHHHHHHHHhcC--CCEEEECCCC------CH-------
Confidence 344556667788888777652221 11 011235778888888764 3344444332 11
Q ss_pred chHHHHHHHHHHHHcCCcEEE--eccCCCHHHHHHHHHH
Q 008423 143 SYQSDLLYLKKKVDAGADLII--TQLFYDTDMFLKFVND 179 (566)
Q Consensus 143 ~~~~dl~~Lk~KvdAGAdFiI--TQlffD~d~f~~f~~~ 179 (566)
.+. ++=+++|||+++ +.++-|++.+.++.+.
T Consensus 90 ---~~~---~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 90 ---EDA---TTLFRAGADKVSVNTAAVRNPQLVALLARE 122 (253)
T ss_dssp ---HHH---HHHHHHTCSEEEESHHHHHCTHHHHHHHHH
T ss_pred ---HHH---HHHHHcCCCEEEEChHHhhCcHHHHHHHHH
Confidence 233 334458999988 6666566666554444
No 301
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=25.60 E-value=3.2e+02 Score=29.11 Aligned_cols=160 Identities=11% Similarity=0.028 Sum_probs=90.4
Q ss_pred hhccCCCcCEEEecCCCCCC-----Cchh---HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe
Q 008423 11 TAWWPTTRHSATSRWGAGGS-----TADL---TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL 82 (566)
Q Consensus 11 ~~~~~~~p~fVsVTwgagG~-----~~~~---Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL 82 (566)
.++|.+..|||-=-- .-++ .+++ ..+...+++++.|-..+--+..++- .+++.+..+.++++|..-++ +
T Consensus 176 ye~~~GGlDfiKDDE-~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiT~~-~~em~~Ra~~a~e~G~~~~m-v 252 (425)
T 2zvi_A 176 RQQALGGVDLIKDDE-IFFETGLAPFETRIAEGKQILKETYEQTGHKTLYAVNLTGR-TADLKDKARRAAELGADALL-F 252 (425)
T ss_dssp HHHHHTTCSEEECCT-TCCCSSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECCSC-GGGHHHHHHHHHHTTCSEEE-E
T ss_pred HHHHhCCCCeeeCCC-CCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceeeCcCCCC-HHHHHHHHHHHHHhCCCeEE-E
Confidence 456777778863211 2222 2222 4466667777899777665666643 56666666778899986555 2
Q ss_pred cCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE
Q 008423 83 RGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI 162 (566)
Q Consensus 83 rGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi 162 (566)
|+ ...+| ..++.+++.. +..+-.-++|.+|.-..... .-.-+..-.+.+|-+= +|||.+
T Consensus 253 --d~---------~~~G~----~a~~~l~~~~--~~~l~lh~HrA~hga~~r~~--~~Gi~~~Vll~Kl~RL--aGaD~i 311 (425)
T 2zvi_A 253 --NV---------FAYGL----DVMQGLAEDP--EIPVPIMAHPAVSGAFTSSP--FYGFSHALLLGKLNRY--CGADFS 311 (425)
T ss_dssp --CG---------GGTCH----HHHHHHHHCT--TCCSCEEECCTTGGGGTSCS--SSEECHHHHTTHHHHH--TTCSEE
T ss_pred --ee---------eccCh----HHHHHHHHhC--cCCCEEEeccCCcccccCCC--CCCCcHHHHHhHHHHH--hCCCcc
Confidence 11 11233 3455666543 23444667888884321110 0001111111333333 799999
Q ss_pred EeccCC-----CHHHHHHHHHHHHHcCCCCcEEeeecccCC
Q 008423 163 ITQLFY-----DTDMFLKFVNDCRQIGITCPIVPGIMPINN 198 (566)
Q Consensus 163 ITQlff-----D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s 198 (566)
.+--+| +.+....|.+.||+-+ . ++++||+-|
T Consensus 312 h~gt~~GKl~~~~~~~~~~~~~l~~~~-~---~k~v~PV~S 348 (425)
T 2zvi_A 312 LFPSPYGSVALPRADALAIHEECVRED-A---FNQTFAVPS 348 (425)
T ss_dssp EECCSSSSSCCCHHHHHHHHHHHHSCC-S---SCCCEEEEC
T ss_pred ccCCcCCCcCCCHHHHHHHHHHhcCCC-C---CCCceEeec
Confidence 887655 7889999999999741 1 455566544
No 302
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=25.55 E-value=5.2e+02 Score=25.99 Aligned_cols=131 Identities=10% Similarity=0.012 Sum_probs=76.5
Q ss_pred chhhccCCCcCEEEecCCCC--------CCCchh----HHHHHHHHHhhcCCceeEEecc---ccC-CHHHHHHHHHHHH
Q 008423 9 GWTAWWPTTRHSATSRWGAG--------GSTADL----TLDIANRMQNTICVETMMHLTC---TNM-PVEKIDHALQTIK 72 (566)
Q Consensus 9 ~~~~~~~~~p~fVsVTwgag--------G~~~~~----Sl~la~~lq~~~Gle~i~HLTC---rd~-n~~~L~~~L~~a~ 72 (566)
+..+.+....+.|.|-.... +.+.+. ..++++.+++ .|+++...+.+ -.+ +.+.+.+.++.+.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~-~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIK-SGLKINVYLEDWSNGFRNSPDYVKSLVEHLS 179 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHH-TTCEEEEEEETHHHHHHHCHHHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCcCCHHHHHHHHHHHH
Confidence 45555555556665543211 122222 3344455554 79998877655 323 6677888888899
Q ss_pred HcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHH
Q 008423 73 SNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLK 152 (566)
Q Consensus 73 ~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk 152 (566)
++|+..|- | .|-.... .-....+||+.+++.+++ ..|++-++=. .. .-+....
T Consensus 180 ~~Ga~~i~-l-~DT~G~~--------~P~~v~~lv~~l~~~~p~-~~i~~H~Hnd-------~G---------lA~AN~l 232 (337)
T 3ble_A 180 KEHIERIF-L-PDTLGVL--------SPEETFQGVDSLIQKYPD-IHFEFHGHND-------YD---------LSVANSL 232 (337)
T ss_dssp TSCCSEEE-E-ECTTCCC--------CHHHHHHHHHHHHHHCTT-SCEEEECBCT-------TS---------CHHHHHH
T ss_pred HcCCCEEE-E-ecCCCCc--------CHHHHHHHHHHHHHhcCC-CeEEEEecCC-------cc---------hHHHHHH
Confidence 99998664 3 3432111 112378899999988853 4566654321 11 2355555
Q ss_pred HHHHcCCcEEEeccC
Q 008423 153 KKVDAGADLIITQLF 167 (566)
Q Consensus 153 ~KvdAGAdFiITQlf 167 (566)
.=++|||+.|=|=+.
T Consensus 233 aAv~aGa~~vd~tv~ 247 (337)
T 3ble_A 233 QAIRAGVKGLHASIN 247 (337)
T ss_dssp HHHHTTCSEEEEBGG
T ss_pred HHHHhCCCEEEEecc
Confidence 667899998866543
No 303
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=25.50 E-value=1.6e+02 Score=28.24 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=40.8
Q ss_pred HHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHH---cCCCCcEEeeecccCCH
Q 008423 150 YLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ---IGITCPIVPGIMPINNY 199 (566)
Q Consensus 150 ~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~---~Gi~vPIIpGImPI~s~ 199 (566)
+.+.=.++|||++.-.+.=..+.+.++++.+++ .|...|.+.+|.|.+|.
T Consensus 74 ~~~~~~~~Gad~vTvH~~~g~~~l~~~~~~~~~~~~~G~~~~~~lav~~~Ts~ 126 (246)
T 2yyu_A 74 AMKGLARVGADLVNVHAAGGRRMMEAAIEGLDAGTPSGRMRPRCIAVTQLTST 126 (246)
T ss_dssp HHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHHSCSSSCCCEEEEESSCTTC
T ss_pred HHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHhhcccCCcCCCEEEEEeCCCC
Confidence 455556799999999988888888899999998 78766767888888884
No 304
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=25.34 E-value=4.8e+02 Score=26.66 Aligned_cols=145 Identities=17% Similarity=0.232 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-|+ +......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 174 ~~~e~~~~~a~~~~~~Gf~~vKik~g~------------~~~~~d~e~v~avR~avG~d~~l~vDan-~~----~~~--- 233 (398)
T 2pp0_A 174 TPLDQVLKNVVISRENGIGGIKLKVGQ------------PNCAEDIRRLTAVREALGDEFPLMVDAN-QQ----WDR--- 233 (398)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCC------------SCHHHHHHHHHHHHHHHCSSSCEEEECT-TC----SCH---
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCC------------CCHHHHHHHHHHHHHHcCCCCeEEEECC-CC----CCH---
Confidence 377888888888889999887653332 1244578889999998887788877553 11 122
Q ss_pred CCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCC
Q 008423 139 ASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKI 213 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~V 213 (566)
.+..++.++++ .|.+| |=|++- |.+.+.+ +++. ..+||..+=. +.+...+.++.+ .+.+-.
T Consensus 234 -------~~ai~~~~~l~~~~i~~-iEqP~~~~d~~~~~~----l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~~~d~v~ 299 (398)
T 2pp0_A 234 -------ETAIRMGRKMEQFNLIW-IEEPLDAYDIEGHAQ----LAAA-LDTPIATGEM-LTSFREHEQLILGNASDFVQ 299 (398)
T ss_dssp -------HHHHHHHHHHGGGTCSC-EECCSCTTCHHHHHH----HHHH-CSSCEEECTT-CCSHHHHHHHHHTTCCSEEC
T ss_pred -------HHHHHHHHHHHHcCCce-eeCCCChhhHHHHHH----HHhh-CCCCEEecCC-cCCHHHHHHHHHcCCCCEEE
Confidence 23333344453 46665 689874 4444333 3332 3589877654 567777776543 232222
Q ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 214 PAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 214 P~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
++- .+-=|+.-+.++++...++|+
T Consensus 300 ik~--------------~~~GGite~~~i~~~A~~~gi 323 (398)
T 2pp0_A 300 PDA--------------PRVGGISPFLKIMDLAAKHGR 323 (398)
T ss_dssp CCH--------------HHHTSHHHHHHHHHHHHHTTC
T ss_pred eCc--------------cccCCHHHHHHHHHHHHHcCC
Confidence 210 122267777777777777763
No 305
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=25.28 E-value=5.5e+02 Score=26.86 Aligned_cols=116 Identities=15% Similarity=0.123 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHc-----CCceeEEEEecCCCCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAY-----GDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~-----gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
.+.+.+....+.+++.+.++..+- .--+.-...|+++.+.+.. .....+|++.-+..
T Consensus 171 ~l~~a~~~m~~~~~~~lpVVd~~g---------~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~--------- 232 (491)
T 1zfj_A 171 DLETAERILHEHRIEKLPLVDNSG---------RLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTS--------- 232 (491)
T ss_dssp CHHHHHHHHHHTTCSEEEEECTTS---------BEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSST---------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCC---------cEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCch---------
Confidence 467788888899999999885321 0113334788888876311 11245555543211
Q ss_pred CCCccchHHHHHHHHHHHHcCCcEEEeccCC-CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 138 VASNESYQSDLLYLKKKVDAGADLIITQLFY-DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff-D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
...++.++=+++|+|.++.|..- +.+.+.+.++.+++.--.+||+.| -+.+...+.++.
T Consensus 233 --------~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G--~v~t~~~a~~~~ 292 (491)
T 1zfj_A 233 --------DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAG--NIATAEGARALY 292 (491)
T ss_dssp --------THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEE--EECSHHHHHHHH
T ss_pred --------hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCC--CccCHHHHHHHH
Confidence 23455555567899999999742 234455667777765226888876 345666555443
No 306
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=25.23 E-value=3.5e+02 Score=27.82 Aligned_cols=112 Identities=10% Similarity=0.004 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCC-CCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLA-LRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTI-GPDGVAS 140 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILa-LrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~-~~~~~~~ 140 (566)
++.+..+++.+.|.+.+=+ --|... ......++.|+.||+..|+.+.|.+=+| + .. +.
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~~----------~~~~~d~~~v~avR~a~G~d~~l~vDan--~---~~~~~----- 214 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPNDK----------VSDKEIVAYLRELREVIGWDMDMMVDCL--Y---RWTDW----- 214 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTT----------SCHHHHHHHHHHHHHHHCSSSEEEEECT--T---CCSCH-----
T ss_pred HHHHHHHHHHHcCCCEEEecccCCCc----------cCHHHHHHHHHHHHHHhCCCCeEEEECC--C---CCCCH-----
Confidence 4445667778899998876 333211 1234578889999999988888887553 1 11 22
Q ss_pred ccchHHHHHHHHHHH-HcCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 141 NESYQSDLLYLKKKV-DAGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 141 ~~~~~~dl~~Lk~Kv-dAGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
.+-.++.+++ +.|.+|| -|++- |.+.+ .++|+. ..+||..|=. +.+...+.++.
T Consensus 215 -----~~A~~~~~~L~~~~i~~i-EeP~~~~~~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~l 271 (394)
T 3mqt_A 215 -----QKARWTFRQLEDIDLYFI-EACLQHDDLIGH----QKLAAA-INTRLCGAEM-STTRFEAQEWL 271 (394)
T ss_dssp -----HHHHHHHHHTGGGCCSEE-ESCSCTTCHHHH----HHHHHH-SSSEEEECTT-CCHHHHHHHHH
T ss_pred -----HHHHHHHHHHhhcCCeEE-ECCCCcccHHHH----HHHHhh-CCCCEEeCCC-cCCHHHHHHHH
Confidence 2333344444 3566654 79986 44443 344443 4589877754 66777776654
No 307
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=24.87 E-value=5e+02 Score=25.42 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHcCCcEEEec----cCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc------cCCCCC
Q 008423 144 YQSDLLYLKKKVDAGADLIITQ----LFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG------FCKTKI 213 (566)
Q Consensus 144 ~~~dl~~Lk~KvdAGAdFiITQ----lffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~------l~Gv~V 213 (566)
+++-++.+++-.+.|+..|+=| +.++.+.+.++++.+++.|+.+-+-+|.+ +...+.++.+ ..++..
T Consensus 86 ~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~l---~~e~l~~L~~ag~~~v~i~let 162 (348)
T 3iix_A 86 PEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGEW---PREYYEKWKEAGADRYLLRHET 162 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCCC---CHHHHHHHHHHTCCEEECCCBC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCCC---CHHHHHHHHHhCCCEEeeeeee
Confidence 3333444444445688755444 67777899999999998865444445544 4444444432 134555
Q ss_pred C-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 214 P-AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 214 P-~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
+ +++.+.+.+..+ .+...+.++.+.+.|+
T Consensus 163 ~~~~~~~~i~~~~~---------~~~~~~~i~~~~~~Gi 192 (348)
T 3iix_A 163 ANPVLHRKLRPDTS---------FENRLNCLLTLKELGY 192 (348)
T ss_dssp SCHHHHHHHSTTSC---------HHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHhCCCcC---------HHHHHHHHHHHHHhCC
Confidence 5 678888876542 3445667777778875
No 308
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=24.79 E-value=1.4e+02 Score=28.75 Aligned_cols=119 Identities=18% Similarity=0.161 Sum_probs=61.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALR--GDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLr--GDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
+.+......+.|.++|.+-|=++- |.. ..+.+++-.+-++.+++..+.. .+-|.. .-+.. +.
T Consensus 69 ~~~~k~~e~~~Ai~~GAdevd~vinig~~---------~~g~~~~v~~ei~~v~~a~~~~-~lkvIl-et~~l---~~-- 132 (220)
T 1ub3_A 69 EKEVKALEAALACARGADEVDMVLHLGRA---------KAGDLDYLEAEVRAVREAVPQA-VLKVIL-ETGYF---SP-- 132 (220)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCHHHH---------HTTCHHHHHHHHHHHHHHSTTS-EEEEEC-CGGGS---CH--
T ss_pred chHHHHHHHHHHHHcCCCEEEecccchhh---------hCCCHHHHHHHHHHHHHHHcCC-CceEEE-ecCCC---CH--
Confidence 334444555666667766664331 110 0233445555666677665432 333221 11111 11
Q ss_pred CCCccchHHHHHH-HHHHHHcCCcEEEeccCCC-----HHHHHHHHHHHHHcCCCCcE-EeeecccCCHHHHHHHhc
Q 008423 138 VASNESYQSDLLY-LKKKVDAGADLIITQLFYD-----TDMFLKFVNDCRQIGITCPI-VPGIMPINNYKGFLRMTG 207 (566)
Q Consensus 138 ~~~~~~~~~dl~~-Lk~KvdAGAdFiITQlffD-----~d~f~~f~~~~R~~Gi~vPI-IpGImPI~s~~~~~r~~~ 207 (566)
+++.+ -+-=+++|||||=|---|. ++.+..+.+.+ |..+|| +.| .|.+++.+..|.+
T Consensus 133 --------e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~v---g~~v~VkaaG--Girt~~~al~~i~ 196 (220)
T 1ub3_A 133 --------EEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVA---QGRAQVKAAG--GIRDRETALRMLK 196 (220)
T ss_dssp --------HHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHH---TTSSEEEEES--SCCSHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhh---CCCCeEEEEC--CCCCHHHHHHHHH
Confidence 23333 2233468999999997553 34554444333 556777 455 5668888777754
No 309
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=24.77 E-value=3.1e+02 Score=28.21 Aligned_cols=209 Identities=15% Similarity=0.195 Sum_probs=102.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEE-EEecC---CCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGIT-VAGYP---EGHPDTIGP 135 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IG-VAgyP---EgHpe~~~~ 135 (566)
+.+.|.+.++.+.++||+.|++..= |....+....+-..-.....-|+.||+.+++-.-|. |+-=| -||--.-+
T Consensus 56 sid~l~~~~~~~~~lGi~~v~LFgv-p~~Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcGil~- 133 (323)
T 1l6s_A 56 PEKHLAREIERIANAGIRSVMTFGI-SHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLC- 133 (323)
T ss_dssp EGGGHHHHHHHHHHHTCCEEEEEEE-CSSCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBC-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCC-CCCCCccccccCCCCCcHHHHHHHHHHHCCCeEEEEeeeccccCCCCceEecc-
Confidence 4567889999999999999997543 432111111111112224556778888888633222 22222 24522111
Q ss_pred CCCCCccchHHHHHHHHH----HHHcCCcEEEeccCCCHHHHHHHHHHHHHcCC-CCcEEeeecccCC--HHHHHHHhcc
Q 008423 136 DGVASNESYQSDLLYLKK----KVDAGADLIITQLFYDTDMFLKFVNDCRQIGI-TCPIVPGIMPINN--YKGFLRMTGF 208 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~----KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi-~vPIIpGImPI~s--~~~~~r~~~l 208 (566)
+|+ -+-+.-++.|.+ -.+||||.+--==--|-.. ....+.+.++|. ++||+.==.--.| |.-|+-.+.-
T Consensus 134 ~g~---V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDGrV-~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~S 209 (323)
T 1l6s_A 134 EHG---VDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQV-QAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGS 209 (323)
T ss_dssp SSS---BCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHH-HHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTC
T ss_pred CCc---CccHHHHHHHHHHHHHHHHcCCCeEecccccccHH-HHHHHHHHhCCCCCceeeehhHHHhHHhhHHHHHHhcC
Confidence 010 111233444443 3579999987666666544 456677888886 4554211000000 1123322211
Q ss_pred CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHH--------------HHHHHHHHHcCCCeEEEEcCCchHHHHHHHHHcCC
Q 008423 209 CKTKIPAEITAALEPIKDNEEAVKAYGIHLG--------------AEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGL 274 (566)
Q Consensus 209 ~Gv~VP~~il~~Le~~kddde~vk~~Gv~la--------------~e~i~~L~~~Gv~GiHfyTlN~e~~v~~IL~~l~l 274 (566)
.- . .+.=-=.+.+ .+.+|+.++.-.++. .++++++++.---=+--|-...|=+..+-....||
T Consensus 210 ap-~-GDRktYQmdp-aN~~EAlre~~~Di~EGAD~vMVKPal~YLDIi~~vk~~~~~P~aaYqVSGEYAMikaAa~~Gw 286 (323)
T 1l6s_A 210 AL-K-GDRKSYQMNP-MNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGA 286 (323)
T ss_dssp CC-S-SCCTTTSBCT-TCHHHHHHHHHHHHHTTCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTS
T ss_pred CC-C-CCccccCCCC-CCHHHHHHHHHhhHHhCCceEEEecCcchhHHHHHHHHhcCCCeEEEEcCcHHHHHHHHHHcCC
Confidence 10 0 0000000111 134567777666552 47888888753222334555566666666666666
Q ss_pred Ccc
Q 008423 275 IEE 277 (566)
Q Consensus 275 ~~~ 277 (566)
+.+
T Consensus 287 iD~ 289 (323)
T 1l6s_A 287 IDE 289 (323)
T ss_dssp SCH
T ss_pred ccH
Confidence 653
No 310
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=24.73 E-value=3.8e+02 Score=27.24 Aligned_cols=145 Identities=8% Similarity=0.129 Sum_probs=85.9
Q ss_pred CCH---HHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCC
Q 008423 59 MPV---EKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 59 ~n~---~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~ 135 (566)
.+. +.+.+...++.+.|.+.|=+=-|+ +......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~------------~~~~~d~e~v~avR~a~G~d~~l~vDan-~~----~~~ 197 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGG------------TSFKEDVRHINALQHTAGSSITMILDAN-QS----YDA 197 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSS------------SCHHHHHHHHHHHHHHHCTTSEEEEECT-TC----CCH
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCC------------CCHHHHHHHHHHHHHhhCCCCEEEEECC-CC----CCH
Confidence 356 777777788888999887653333 1234578899999999988888887554 11 122
Q ss_pred CCCCCccchHHHHHHHHHHHH-c-CCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cC
Q 008423 136 DGVASNESYQSDLLYLKKKVD-A-GADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FC 209 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~Kvd-A-GAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~ 209 (566)
.+..++.++++ . |.+ .|=|++- |.+.+ .++++. ..+||..+=. +.+...+.++.+ .+
T Consensus 198 ----------~~a~~~~~~l~~~~~i~-~iEqP~~~~d~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~i~~~~~ 260 (382)
T 2gdq_A 198 ----------AAAFKWERYFSEWTNIG-WLEEPLPFDQPQDY----AMLRSR-LSVPVAGGEN-MKGPAQYVPLLSQRCL 260 (382)
T ss_dssp ----------HHHHTTHHHHTTCSCEE-EEECCSCSSCHHHH----HHHHTT-CSSCEEECTT-CCSHHHHHHHHHTTCC
T ss_pred ----------HHHHHHHHHHhhccCCe-EEECCCCcccHHHH----HHHHhh-CCCCEEecCC-cCCHHHHHHHHHcCCC
Confidence 33334444454 3 444 5789875 43333 344443 4689877643 566777776553 23
Q ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 210 KTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 210 Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
.+-.++ + .+-=|+.-+.++++...+.|+
T Consensus 261 d~v~ik-----~---------~~~GGit~~~~i~~~A~~~g~ 288 (382)
T 2gdq_A 261 DIIQPD-----V---------MHVNGIDEFRDCLQLARYFGV 288 (382)
T ss_dssp SEECCC-----T---------TTTTHHHHHHHHHHHHHHHTC
T ss_pred CEEecC-----c---------cccCCHHHHHHHHHHHHHcCC
Confidence 222221 0 111266667777777777763
No 311
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=24.70 E-value=72 Score=29.54 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=38.1
Q ss_pred HHHHHHHHHH----cCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeeccc--CCHHHHHHHhccCCCCCCHH
Q 008423 147 DLLYLKKKVD----AGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPI--NNYKGFLRMTGFCKTKIPAE 216 (566)
Q Consensus 147 dl~~Lk~Kvd----AGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI--~s~~~~~r~~~l~Gv~VP~~ 216 (566)
|.++|+++++ +||+.+++|--.|.-... .+.++|| |-+ .+...+.|+++.+|..+=.+
T Consensus 63 E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~----~l~k~gI--------~~vr~v~~~dleria~atGa~iv~~ 126 (178)
T 1gml_A 63 EEEYIHQLCEDIIQLKPDVVITEKGISDLAQH----YLMRANV--------TAIRRVRKTDNNRIARACGARIVSR 126 (178)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEESSCBCHHHHH----HHHHTTC--------EEECCCCHHHHHHHHHHHCCCEESC
T ss_pred HHHHHHHHHHHHhhcCCcEEEECCcccHHHHH----HHHHCCC--------EEEecCCHHHHHHHHHHhCCeEeCC
Confidence 4455555554 599999999999876643 3445553 323 35568888999999875333
No 312
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=24.59 E-value=1e+02 Score=30.58 Aligned_cols=55 Identities=16% Similarity=0.114 Sum_probs=36.4
Q ss_pred HHHHHHHcCCcEEEeccCC-----CHHHHHHHHHHHHHc--CCCCcE-EeeecccCCHHHHHHHh
Q 008423 150 YLKKKVDAGADLIITQLFY-----DTDMFLKFVNDCRQI--GITCPI-VPGIMPINNYKGFLRMT 206 (566)
Q Consensus 150 ~Lk~KvdAGAdFiITQlff-----D~d~f~~f~~~~R~~--Gi~vPI-IpGImPI~s~~~~~r~~ 206 (566)
.-+-=++||||||=|---| +++...-+.+.+|+. |-.+|| ..| .|.+++.+..|.
T Consensus 155 a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaG--GIrt~~~al~~i 217 (260)
T 1p1x_A 155 ASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAG--GVRTAEDAQKYL 217 (260)
T ss_dssp HHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBS--SCCSHHHHHHHH
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeC--CCCCHHHHHHHH
Confidence 3444567999999999655 567666666666654 445666 344 677777776654
No 313
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.56 E-value=2.9e+02 Score=22.53 Aligned_cols=58 Identities=14% Similarity=0.128 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
+.++++.||+.+..--.|-+++++. .....+-+++||+-+++-+ ++.+.+..-++.+-
T Consensus 64 g~~~~~~l~~~~~~~~ii~ls~~~~--------------------~~~~~~~~~~g~~~~l~kp-~~~~~l~~~l~~~~ 121 (143)
T 3jte_A 64 GMDILREIKKITPHMAVIILTGHGD--------------------LDNAILAMKEGAFEYLRKP-VTAQDLSIAINNAI 121 (143)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECTTC--------------------HHHHHHHHHTTCSEEEESS-CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCC--------------------HHHHHHHHHhCcceeEeCC-CCHHHHHHHHHHHH
Confidence 7889999998765433344443221 2334455679999999998 67777766655543
No 314
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=24.34 E-value=1.5e+02 Score=33.27 Aligned_cols=117 Identities=15% Similarity=0.054 Sum_probs=73.0
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEecc----------CCCHHH---HHHHHHHHHHcC
Q 008423 118 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQL----------FYDTDM---FLKFVNDCRQIG 184 (566)
Q Consensus 118 F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQl----------ffD~d~---f~~f~~~~R~~G 184 (566)
+-+|+.-+|+.-|. +.- .+.|++-.++|.+.|-|-+ .||-+- +.+|++.|+++|
T Consensus 26 ~i~sG~~Hy~r~p~----------~~W---~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~G 92 (654)
T 3thd_A 26 RYISGSIHYSRVPR----------FYW---KDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELG 92 (654)
T ss_dssp CCEEEECCGGGSCG----------GGH---HHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTT
T ss_pred EEEEEecccccCCH----------HHH---HHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcC
Confidence 46677777766542 122 2233333358999998811 133333 788999999999
Q ss_pred CCCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHHc-----C-CCeEEE
Q 008423 185 ITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALE-PIKDNEEAVKAYGIHLGAEMCKKILAH-----G-IKTLHL 256 (566)
Q Consensus 185 i~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le-~~kddde~vk~~Gv~la~e~i~~L~~~-----G-v~GiHf 256 (566)
+.+ |...=|-.. +++..-.+|.++.+.=+ ..+.++...+++--++...+++++... | |-.+|+
T Consensus 93 L~V--iLr~GPyi~-------aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~Qv 162 (654)
T 3thd_A 93 LLV--ILRPGPYIC-------AEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQV 162 (654)
T ss_dssp CEE--EEECCSCCC-------TTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEC
T ss_pred CEE--EeccCCccc-------cccCCCcCChHHhcCCCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEe
Confidence 764 444334332 56666678998876522 234566778888888888888887642 2 556665
No 315
>2d9b_A Gtfii-I, general transcription factor II-I, TFII-I; structural genomics, unknown function, NPPSFA; NMR {Homo sapiens} PDB: 2e3l_A
Probab=24.33 E-value=1.1e+02 Score=26.72 Aligned_cols=42 Identities=31% Similarity=0.418 Sum_probs=32.6
Q ss_pred eEEEEecCCCCCCC--CCCCCCCCccchHHHHHHHHHHHHcCC--cEEEeccCCCHH
Q 008423 119 GITVAGYPEGHPDT--IGPDGVASNESYQSDLLYLKKKVDAGA--DLIITQLFYDTD 171 (566)
Q Consensus 119 ~IGVAgyPEgHpe~--~~~~~~~~~~~~~~dl~~Lk~KvdAGA--dFiITQlffD~d 171 (566)
++-|.|-|||++.- .+. ++.+|++=+++.+ .|+|..+|.++.
T Consensus 53 ~v~V~GLPegi~fR~P~~Y-----------gi~~L~~ILe~~~~I~FvIkRP~~~~~ 98 (109)
T 2d9b_A 53 AVVVQGLPEGVAFKHPENY-----------DLATLKWILENKAGISFIIKRPFLEPK 98 (109)
T ss_dssp SEEEESCCTTCCSCCTTSS-----------CHHHHHHHHHTTTTCEEEESCCCCCCC
T ss_pred cEEEeeCCCCCccCCcccc-----------CHHHHHHHHHcCcCceEEEeCCCcCcc
Confidence 78899999998762 233 4888888777765 699999998753
No 316
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=24.10 E-value=1.4e+02 Score=35.39 Aligned_cols=118 Identities=15% Similarity=0.147 Sum_probs=73.8
Q ss_pred eeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccC----------CCHH---HHHHHHHHHHHcC
Q 008423 118 FGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLF----------YDTD---MFLKFVNDCRQIG 184 (566)
Q Consensus 118 F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlf----------fD~d---~f~~f~~~~R~~G 184 (566)
+-+++..+|++-|. + +.-++ +|++-.++|.+-|-|-.| ||.+ .+.+|++.|+++|
T Consensus 41 ~i~sGeiHy~R~p~---p------e~W~d---~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl~la~e~G 108 (1003)
T 3og2_A 41 VIFSGEVHPFRLPV---P------SLYLD---VFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAG 108 (1003)
T ss_dssp CEEEEEECGGGCCC---G------GGHHH---HHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHT
T ss_pred EEEEEEECCccCCC---H------HHHHH---HHHHHHHcCCCEEEEecchhhcCCCCCEecccchhhHHHHHHHHHHcC
Confidence 46677777776541 1 11122 233333578998888544 3333 4788999999999
Q ss_pred CCCcEEeeecccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHc-----C-CCeEEE
Q 008423 185 ITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAH-----G-IKTLHL 256 (566)
Q Consensus 185 i~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~-----G-v~GiHf 256 (566)
+.+-+.|| |-.. +++..-.+|.++.+.=...+.+++..+++--++..++++++.+. | |-.+|+
T Consensus 109 L~VILRpG--PYi~-------aEw~~GG~P~WL~~~~~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QV 177 (1003)
T 3og2_A 109 IYLLARPG--PYIN-------AEVSGGGFPGWLQRVKGKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQP 177 (1003)
T ss_dssp CEEEEEEE--SCCC-------TTBGGGGCCGGGGGCCSCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEE
T ss_pred CEEEecCC--ccee-------eecCCCCccchhccCCCeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEc
Confidence 76544444 4432 45555667888775222344566778888888888888888853 2 667776
No 317
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=24.08 E-value=2.5e+02 Score=24.08 Aligned_cols=98 Identities=21% Similarity=0.344 Sum_probs=65.6
Q ss_pred EEeccccCCHHHHHHHHHHHHHcCC-CEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCC
Q 008423 52 MHLTCTNMPVEKIDHALQTIKSNGI-QNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHP 130 (566)
Q Consensus 52 ~HLTCrd~n~~~L~~~L~~a~~~GI-rNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHp 130 (566)
.++++.+.+...++..-..+...|+ .++-++.||.... +. ..+ .|.+-++..+-.|
T Consensus 56 ~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------------------~~-~~~-~~D~v~~~~~~~~- 112 (192)
T 1l3i_A 56 RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA--------------------LC-KIP-DIDIAVVGGSGGE- 112 (192)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH--------------------HT-TSC-CEEEEEESCCTTC-
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh--------------------cc-cCC-CCCEEEECCchHH-
Confidence 5889999999999988888888888 6676666664210 00 011 3666555544322
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCC
Q 008423 131 DTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITC 187 (566)
Q Consensus 131 e~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~v 187 (566)
...-++.+.+-++.|..++++.+ +.+...++.+.+++.|..+
T Consensus 113 -------------~~~~l~~~~~~l~~gG~l~~~~~--~~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 113 -------------LQEILRIIKDKLKPGGRIIVTAI--LLETKFEAMECLRDLGFDV 154 (192)
T ss_dssp -------------HHHHHHHHHHTEEEEEEEEEEEC--BHHHHHHHHHHHHHTTCCC
T ss_pred -------------HHHHHHHHHHhcCCCcEEEEEec--CcchHHHHHHHHHHCCCce
Confidence 12556777777777888887654 4667778888899888654
No 318
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=23.89 E-value=5.7e+02 Score=25.76 Aligned_cols=146 Identities=14% Similarity=0.087 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+.+.++.+.|.+.+=+=-|+ .+....+.|+.||+..|+.+.|.+=+|- + .+.
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~-------------~~~~d~~~v~avr~a~g~~~~l~vDaN~-~----~~~---- 201 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR-------------EPEKDPERVRAAREAIGESVELMVDANG-A----YTR---- 201 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-------------SGGGHHHHHHHHHHHHCTTSEEEEECTT-C----SCH----
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC-------------CHHHHHHHHHHHHHHhCCCCeEEEECCC-C----CCH----
Confidence 45667777777788898887643333 2345788999999988877777776541 1 122
Q ss_pred CccchHHHHHHHHHHHHcC-CcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhccCCCCCCHH
Q 008423 140 SNESYQSDLLYLKKKVDAG-ADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAE 216 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdAG-AdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l~Gv~VP~~ 216 (566)
.+..++.++++.- --..|=|++- |.+.+.++ .++.+..+||..|=. +.+...++++...+.+-.|+
T Consensus 202 ------~~a~~~~~~l~~~~~i~~iEqP~~~~d~~~~~~l---~~~~~~~ipIa~dE~-~~~~~~~~~~~~a~d~i~ik- 270 (372)
T 3cyj_A 202 ------KQALYWAGAFAREAGISYLEEPVSSEDREGLRLL---RDRGPGGVAIAAGEY-EWTLPQLHDLAGCVDILQAD- 270 (372)
T ss_dssp ------HHHHHHHHHHHHHHCCCEEECSSCTTCHHHHHHH---HHHSCTTCEEEECTT-CCSHHHHHHHHTTCSEEEEC-
T ss_pred ------HHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHH---HHhCCCCCCEECCCC-ccCHHHHHHHhCCCCEEecC-
Confidence 2333333345442 3357899996 55554443 333343379888754 44566666653333322221
Q ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Q 008423 217 ITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGI 251 (566)
Q Consensus 217 il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv 251 (566)
. .+-=|+.-+.++++...+.|+
T Consensus 271 ------~-------~~~GGit~~~~i~~~A~~~gi 292 (372)
T 3cyj_A 271 ------V-------TRCGGITGLLRVDGICRGHQI 292 (372)
T ss_dssp ------T-------TTTTHHHHHTTHHHHHHHHTC
T ss_pred ------c-------hhhCCHHHHHHHHHHHHHcCC
Confidence 0 011155556666666666653
No 319
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=23.79 E-value=1.5e+02 Score=27.61 Aligned_cols=51 Identities=8% Similarity=0.086 Sum_probs=35.4
Q ss_pred HHHHHHHhhcCCceeEEeccccC----------CHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 008423 37 DIANRMQNTICVETMMHLTCTNM----------PVEKIDHALQTIKSNGIQNVLALRGDPPH 88 (566)
Q Consensus 37 ~la~~lq~~~Gle~i~HLTCrd~----------n~~~L~~~L~~a~~~GIrNILaLrGDpp~ 88 (566)
++.+.++ +.|+.+..|-+..+. ..+.+++.+..|+++|++.|.+..|..+.
T Consensus 49 ~~~~~l~-~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~ 109 (275)
T 3qc0_A 49 EAGRIVR-ANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPG 109 (275)
T ss_dssp HHHHHHH-HHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCT
T ss_pred HHHHHHH-HcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCC
Confidence 3444444 579988755432222 23678889999999999999998886553
No 320
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=23.78 E-value=3.5e+02 Score=25.12 Aligned_cols=16 Identities=19% Similarity=0.274 Sum_probs=7.5
Q ss_pred HHHHHHHHHHcCCCCc
Q 008423 173 FLKFVNDCRQIGITCP 188 (566)
Q Consensus 173 f~~f~~~~R~~Gi~vP 188 (566)
....++.++++|+.+|
T Consensus 204 a~g~~~al~~~g~~vP 219 (292)
T 3k4h_A 204 GLGVLSALSKKGFVVP 219 (292)
T ss_dssp HHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCCC
Confidence 3344455555554444
No 321
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=23.76 E-value=50 Score=32.45 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=58.8
Q ss_pred ceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 49 ETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 49 e~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
++=.||..... +.|.+|+++||+.++++.-|+..... .......|..+.+|-..+.+++++.....+..+|.-
T Consensus 4 DtH~Hld~~~~------~~l~~a~~~GV~~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~GiHP~~ 76 (261)
T 3guw_A 4 DSHLHSEGLGF------SELVKLKENGIKEVCSLAFFPVKPKY-PQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGIHPRC 76 (261)
T ss_dssp BCCCCGGGCCH------HHHHHHHTTSCCEECCBCCCSSCCSS-HHHHHHHHHHHHHTHHHHHHTTTCEECCBCCCCGGG
T ss_pred EeccCCCCCCh------HHHHHHHHCCCcEEEEeccCccccch-hhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEECccc
Confidence 44457765432 25788999999999988777543211 000001233333322222335654344455566643
Q ss_pred CCCCCCCCCCCCccchHHHHHHHHH-HH----HcCCcEEEeccCCCH--HHHHHHHHHHHHcCCCCcEEe
Q 008423 129 HPDTIGPDGVASNESYQSDLLYLKK-KV----DAGADLIITQLFYDT--DMFLKFVNDCRQIGITCPIVP 191 (566)
Q Consensus 129 Hpe~~~~~~~~~~~~~~~dl~~Lk~-Kv----dAGAdFiITQlffD~--d~f~~f~~~~R~~Gi~vPIIp 191 (566)
-.+ ..+..++.|++ |+ +.|=||. .+. +.|.+.++.+++.| +||+.
T Consensus 77 ~~~-----------~~~~~~~~l~~~~vvaIGEiGLD~~-----~~~Q~~~f~~ql~lA~e~~--lPv~i 128 (261)
T 3guw_A 77 IPP-----------DYEFVLGYLEEGEWVAFGEIGLELV-----TDEEIEVLKSQLELAKRMD--VPCII 128 (261)
T ss_dssp CCT-----------TTHHHHHHHTTSCCSCEEEEECSSC-----CHHHHHHHHHHHHHHHHHT--CCEEE
T ss_pred ccc-----------cHHHHHHHhCcCCeEEEEEecCCCC-----hHHHHHHHHHHHHHHHHhC--CeEEE
Confidence 211 12245555554 22 1244542 222 34666777777765 77653
No 322
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=23.74 E-value=1.6e+02 Score=27.81 Aligned_cols=94 Identities=16% Similarity=0.260 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccc
Q 008423 64 IDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNES 143 (566)
Q Consensus 64 L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~ 143 (566)
..+.+..+.++|+..|++-.-++. +. ..++ ..++++.+++..+ .-|-+.| | ..+.
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~--g~-----~~g~--~~~~~~~l~~~~~--ipvia~G---G---I~~~-------- 207 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRD--GT-----KSGY--DTEMIRFVRPLTT--LPIIASG---G---AGKM-------- 207 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTT--TS-----CSCC--CHHHHHHHGGGCC--SCEEEES---C---CCSH--------
T ss_pred HHHHHHHHHHCCCCEEEEEeccCC--CC-----CCCC--CHHHHHHHHHhcC--CCEEEEC---C---CCCH--------
Confidence 445567777899999997543322 11 1233 3677777776442 2221111 1 1111
Q ss_pred hHHHHHHHHHHHHcCCcE-EEeccCCCHH-HHHHHHHHHHHcCCCC
Q 008423 144 YQSDLLYLKKKVDAGADL-IITQLFYDTD-MFLKFVNDCRQIGITC 187 (566)
Q Consensus 144 ~~~dl~~Lk~KvdAGAdF-iITQlffD~d-~f~~f~~~~R~~Gi~v 187 (566)
+++.+++ ++|||. ++--.+|..+ .+.+..+.+++.|+.+
T Consensus 208 --~d~~~~~---~~Gadgv~vGsal~~~~~~~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 208 --EHFLEAF---LAGADAALAASVFHFREIDVRELKEYLKKHGVNV 248 (253)
T ss_dssp --HHHHHHH---HTTCSEEEESHHHHTTCSCHHHHHHHHHHTTCCC
T ss_pred --HHHHHHH---HcCChHHHHHHHHHcCCCCHHHHHHHHHHcCCcc
Confidence 4566665 489995 4555566544 5777778888888654
No 323
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=23.62 E-value=6.3e+02 Score=26.64 Aligned_cols=150 Identities=10% Similarity=-0.015 Sum_probs=86.9
Q ss_pred hhccCCCcCEEEe----cCCCCCCCchh---HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEec
Q 008423 11 TAWWPTTRHSATS----RWGAGGSTADL---TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALR 83 (566)
Q Consensus 11 ~~~~~~~p~fVsV----TwgagG~~~~~---Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLr 83 (566)
.++|.+..|||-= +..+-...+++ ..+...+++++.|-..+--+..++ +.+++.+..+.++++|..-+|+
T Consensus 162 ye~~~GGlDfiKDDE~~~~qpf~p~~eR~~~v~eai~ra~~eTGe~k~~~~NiT~-~~~em~~Ra~~a~e~G~~~~mv-- 238 (413)
T 2oem_A 162 KKQALGGVDLVKDDEILFDSELLPFEKRITEGKAALQEVYEQTGKRTLYAVNLTG-KTFALKDKAKRAAELGADVLLF-- 238 (413)
T ss_dssp HHHHHTTCSEEECCTTCCCCSSSCHHHHHHHHHHHHHHHHHHHSCCCEEEEECCS-CGGGHHHHHHHHHHTTCSEEEE--
T ss_pred HHHHhCCCceeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHCCcceeeCcCCC-CHHHHHHHHHHHHHhCCCeEEE--
Confidence 4567777788732 22122122232 446666777789977766666775 7777777778889999865553
Q ss_pred CCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEE
Q 008423 84 GDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLII 163 (566)
Q Consensus 84 GDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiI 163 (566)
|+- .++|. .++.+++.+ ...+-.-++|.+|.-..... .-.-+..-.+.+|-+= +|||.+.
T Consensus 239 -d~~---------~~G~~----a~~~l~~~~--~~~~~lh~HrA~hg~~~r~~--~~Gi~~~vll~Kl~Rl--~G~D~ih 298 (413)
T 2oem_A 239 -NVF---------AYGLD----VLQALREDE--EIAVPIMAHPAFSGAVTPSE--FYGVAPSLWLGKLLRL--AGADFVL 298 (413)
T ss_dssp -CGG---------GSCHH----HHHHHHHCT--TTCCCEEECCTTGGGTSSCS--SSSBCHHHHTTHHHHH--HTCSEEE
T ss_pred -eee---------ccChH----HHHHHHhhc--cCCceEEeccccceeeccCC--CCCcchHHHHHHHHHH--cCCCeee
Confidence 221 23343 344455432 13444667888884321100 0011222111444443 6999998
Q ss_pred eccCC-----CHHHHHHHHHHHHHc
Q 008423 164 TQLFY-----DTDMFLKFVNDCRQI 183 (566)
Q Consensus 164 TQlff-----D~d~f~~f~~~~R~~ 183 (566)
+--+| +.+....+.+.||+-
T Consensus 299 ~gt~~GK~~g~~~~~~~~~~~~~~~ 323 (413)
T 2oem_A 299 FPSPYGSVALEREQALGIARALTDD 323 (413)
T ss_dssp EECSSSSSCCCHHHHHHHHHHHHCT
T ss_pred cCCcCCCcCCCHHHHHHHHHHHhcc
Confidence 76554 889999999999973
No 324
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=23.60 E-value=4.4e+02 Score=27.04 Aligned_cols=103 Identities=15% Similarity=0.291 Sum_probs=58.7
Q ss_pred eccccCCHHHHHHHHHH-------HHHcCCCEEEEecCC---------CC--CCCCCccc-cCCCcccHHHHHHHHHHHc
Q 008423 54 LTCTNMPVEKIDHALQT-------IKSNGIQNVLALRGD---------PP--HGQDKFVQ-IQGGFACALDLVKHIRSAY 114 (566)
Q Consensus 54 LTCrd~n~~~L~~~L~~-------a~~~GIrNILaLrGD---------pp--~~~~~~~~-~~~~F~~A~dLVk~Ir~~~ 114 (566)
-+.+-|+.++|++.++. |+++|++-|=+=.|- |. +-.+.|-. ..+......++|+.||+..
T Consensus 138 ~~pr~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~v 217 (362)
T 4ab4_A 138 PTPRALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVW 217 (362)
T ss_dssp CCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhc
Confidence 34567788887766543 467999988866553 32 11121110 0112334788899999988
Q ss_pred CCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHH-HcCCcEEE
Q 008423 115 GDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKV-DAGADLII 163 (566)
Q Consensus 115 gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI 163 (566)
|.. .|||=..|........ ..+...+..++.+.+ ++|+|+|-
T Consensus 218 g~~-~v~vRls~~~~~~g~~------~~~~~~~~~~la~~l~~~Gvd~i~ 260 (362)
T 4ab4_A 218 GAQ-RVGVHLAPRADAHDMG------DADRAETFTYVARELGKRGIAFIC 260 (362)
T ss_dssp CGG-GEEEEECTTCCSSSCC------CTTHHHHHHHHHHHHHHTTCSEEE
T ss_pred CCC-ceEEEeeccccccccC------CCCcHHHHHHHHHHHHHhCCCEEE
Confidence 866 7888888764321100 011123444554444 47999873
No 325
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=23.57 E-value=6.1e+02 Score=26.31 Aligned_cols=165 Identities=14% Similarity=0.121 Sum_probs=92.0
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEecCCCC---CCC-----CCcccc----CC--------CcccHHHHHHHHHHHcCC
Q 008423 57 TNMPVEKIDHALQTIKSNGIQNVLALRGDPP---HGQ-----DKFVQI----QG--------GFACALDLVKHIRSAYGD 116 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~~GIrNILaLrGDpp---~~~-----~~~~~~----~~--------~F~~A~dLVk~Ir~~~gd 116 (566)
...+.+++.+..+++.+.|.+.+=+=-|.+. ..+ ..+.+. ++ .++..++.|+.||+..|+
T Consensus 146 ~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~ 225 (424)
T 3v3w_A 146 NGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGP 225 (424)
T ss_dssp EESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCC
Confidence 3457888888889999999998865434321 000 000000 00 134568889999999988
Q ss_pred ceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeee
Q 008423 117 YFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVD-AGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGI 193 (566)
Q Consensus 117 ~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGI 193 (566)
.+.|.+=+|- + .+. .+..++.++++ .|.+| |=|++- |.+.+ .++|++ ..+||..|=
T Consensus 226 d~~l~vDaN~-~----~~~----------~~A~~~~~~L~~~~i~~-iEqP~~~~d~~~~----~~l~~~-~~iPIa~dE 284 (424)
T 3v3w_A 226 DIHLLHDVHH-R----LTP----------IEAARLGKALEPYHLFW-MEDAVPAENQESF----KLIRQH-TTTPLAVGE 284 (424)
T ss_dssp SSEEEEECTT-C----CCH----------HHHHHHHHHHGGGCCSE-EECCSCCSSTTHH----HHHHHH-CCSCEEECT
T ss_pred CCcEEEeCCC-C----CCH----------HHHHHHHHHHHhcCCCE-EECCCChHhHHHH----HHHHhh-CCCCEEEcc
Confidence 8888875431 1 122 34444545553 46555 578885 44443 334433 468988774
Q ss_pred cccCCHHHHHHHhcc--CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEE
Q 008423 194 MPINNYKGFLRMTGF--CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK-TLHLY 257 (566)
Q Consensus 194 mPI~s~~~~~r~~~l--~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~-GiHfy 257 (566)
. +.+...+.++.+. +.+-.|+- .+-=|+.-+.+++....+.|++ -+|-+
T Consensus 285 ~-~~~~~~~~~~i~~ga~d~v~~k~--------------~~~GGit~~~~ia~~A~~~gi~~~~h~~ 336 (424)
T 3v3w_A 285 V-FNSIHDCRELIQNQWIDYIRTTI--------------VHAGGISQMRRIADFASLFHVRTGFHGA 336 (424)
T ss_dssp T-CCSGGGTHHHHHTTCCSEECCCT--------------TTTTHHHHHHHHHHHHHTTTCEEEECCC
T ss_pred C-cCCHHHHHHHHHcCCCCeEeecc--------------hhcCCHHHHHHHHHHHHHcCCEEEecCC
Confidence 4 5566666655432 22222210 1122666677777777777654 34433
No 326
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=23.55 E-value=1.8e+02 Score=27.12 Aligned_cols=35 Identities=11% Similarity=0.321 Sum_probs=23.2
Q ss_pred eeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCC
Q 008423 50 TMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGD 85 (566)
Q Consensus 50 ~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGD 85 (566)
+=.|+...... ..+++.|..+.++||+.++++..+
T Consensus 5 ~H~Hl~~~~~~-~~~~~~l~~~~~~Gv~~~v~~~~~ 39 (265)
T 2gzx_A 5 THVHLNDEQYD-DDLSEVITRAREAGVDRMFVVGFN 39 (265)
T ss_dssp EEECTTSGGGT-TTHHHHHHHHHHTTCCEEEEEECS
T ss_pred EeeCCCCcccc-cCHHHHHHHHHHcCCCEEEEeCCC
Confidence 33455443322 236778888899999999988644
No 327
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=23.34 E-value=1.6e+02 Score=30.22 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=0.0
Q ss_pred CCcccHHHHHHHHHHHc-CCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC--------
Q 008423 98 GGFACALDLVKHIRSAY-GDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY-------- 168 (566)
Q Consensus 98 ~~F~~A~dLVk~Ir~~~-gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff-------- 168 (566)
+......+.|+.+|+.+ +-.+-+|.+..++. .++=+++|||+|+...--
T Consensus 143 g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~----------------------A~~a~~aGaD~I~v~~g~G~~~~~r~ 200 (351)
T 2c6q_A 143 GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEM----------------------VEELILSGADIIKVGIGPGSVCTTRK 200 (351)
T ss_dssp TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHH----------------------HHHHHHTTCSEEEECSSCSTTBCHHH
T ss_pred CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHH----------------------HHHHHHhCCCEEEECCCCCcCcCccc
Q ss_pred -------CHHHHHHHHHHHHHcCCCCcEEe--eec
Q 008423 169 -------DTDMFLKFVNDCRQIGITCPIVP--GIM 194 (566)
Q Consensus 169 -------D~d~f~~f~~~~R~~Gi~vPIIp--GIm 194 (566)
....+.+..+.++..+ +|||+ ||+
T Consensus 201 ~~g~~~p~~~~l~~v~~~~~~~~--ipvIa~GGI~ 233 (351)
T 2c6q_A 201 KTGVGYPQLSAVMECADAAHGLK--GHIISDGGCS 233 (351)
T ss_dssp HHCBCCCHHHHHHHHHHHHHHTT--CEEEEESCCC
T ss_pred cCCCCccHHHHHHHHHHHHhhcC--CcEEEeCCCC
No 328
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=23.18 E-value=6.1e+02 Score=25.86 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=86.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDG 137 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~ 137 (566)
..+.+++.+....+.+.|.+.|=+=-|- .....++.|+.+|+..|+++.|.+=+| .+ .+.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~-------------~~~~d~~~v~avR~a~g~d~~l~vDan-~~----~~~-- 208 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGR-------------APRKDAANLRAMRQRVGADVEILVDAN-QS----LGR-- 208 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCS-------------CHHHHHHHHHHHHHHHCTTSEEEEECT-TC----CCH--
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCC-------------CHHHHHHHHHHHHHHcCCCceEEEECC-CC----cCH--
Confidence 4578889899999999999887542221 233578889999999988788876543 11 122
Q ss_pred CCCccchHHHHHHHHHHH-HcCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCC
Q 008423 138 VASNESYQSDLLYLKKKV-DAGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTK 212 (566)
Q Consensus 138 ~~~~~~~~~dl~~Lk~Kv-dAGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~ 212 (566)
.+..++.+.+ +.|.+|| -|++- |.+. +.++++....+||..|=. +.+...+.++.+ .+.+-
T Consensus 209 --------~~A~~~~~~l~~~~i~~i-EqP~~~~d~~~----~~~l~~~~~~iPIa~dE~-i~~~~~~~~~i~~~~~d~v 274 (389)
T 3ozy_A 209 --------HDALAMLRILDEAGCYWF-EEPLSIDDIEG----HRILRAQGTPVRIATGEN-LYTRNAFNDYIRNDAIDVL 274 (389)
T ss_dssp --------HHHHHHHHHHHHTTCSEE-ESCSCTTCHHH----HHHHHTTCCSSEEEECTT-CCHHHHHHHHHHTTCCSEE
T ss_pred --------HHHHHHHHHHHhcCCCEE-ECCCCcccHHH----HHHHHhcCCCCCEEeCCC-CCCHHHHHHHHHcCCCCEE
Confidence 3333344444 3566654 79986 4443 344551235689887743 566767766543 23322
Q ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 213 IPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 213 VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
.|+ +. +-=|+.-+.+++....++|
T Consensus 275 ~ik-----~~---------~~GGit~~~~ia~~A~~~g 298 (389)
T 3ozy_A 275 QAD-----AS---------RAGGITEALAISASAASAH 298 (389)
T ss_dssp CCC-----TT---------TSSCHHHHHHHHHHHHHTT
T ss_pred EeC-----cc---------ccCCHHHHHHHHHHHHHcC
Confidence 221 11 1115666667777666665
No 329
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=23.08 E-value=1.6e+02 Score=28.18 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=40.7
Q ss_pred HHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHc---CCCCcEEeeecccCCH
Q 008423 149 LYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQI---GITCPIVPGIMPINNY 199 (566)
Q Consensus 149 ~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~---Gi~vPIIpGImPI~s~ 199 (566)
.+.+.=.++|||++.-...-..+.+.++++.+++. |...|...+|.+.+|.
T Consensus 72 ~~~~~~~~~Gad~vtvH~~~g~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~ 125 (239)
T 1dbt_A 72 KAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTST 125 (239)
T ss_dssp HHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTC
T ss_pred HHHHHHHhcCCCEEEEeCcCCHHHHHHHHHHHHhhhccCCCCccEEEEEEcCCC
Confidence 34555567999999998888888788999999988 8666877888887764
No 330
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=23.01 E-value=2.9e+02 Score=26.07 Aligned_cols=22 Identities=9% Similarity=0.072 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEec
Q 008423 62 EKIDHALQTIKSNGIQNVLALR 83 (566)
Q Consensus 62 ~~L~~~L~~a~~~GIrNILaLr 83 (566)
..+.+.|..++++|++.|=+-.
T Consensus 21 ~~l~~~l~~~~~~G~~~vEl~~ 42 (290)
T 3tva_A 21 AGLGVHLEVAQDLKVPTVQVHA 42 (290)
T ss_dssp SSSSBCHHHHHHTTCSEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEecC
Confidence 3466788999999999987554
No 331
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=22.87 E-value=5.7e+02 Score=26.02 Aligned_cols=114 Identities=10% Similarity=0.116 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCC
Q 008423 59 MPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGV 138 (566)
Q Consensus 59 ~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~ 138 (566)
.+.+++.+...++.+.|.+.|=+=-| .+ ......+.|+.||+..|+.+.|.+=++ .+ .+.
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g-----~~-------~~~~~~e~v~avR~a~G~d~~l~vDan-~~----~~~--- 207 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPM-----LD-------SLSISIQFVEKVREIVGDELPLMLDLA-VP----EDL--- 207 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCC-----CS-------SHHHHHHHHHHHHHHHCSSSCEEEECC-CC----SCH---
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccC-----CC-------hHHHHHHHHHHHHHHhCCCCEEEEEcC-CC----CCH---
Confidence 46788888888888999887763222 00 134578899999998888888887553 11 122
Q ss_pred CCccchHHHHHHHHHHH-HcCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 139 ASNESYQSDLLYLKKKV-DAGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 139 ~~~~~~~~dl~~Lk~Kv-dAGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
.+..++.+++ +.|.++ |-|++- |.+.+ .++++. ..+||..+=. +.+...+.++.
T Consensus 208 -------~~a~~~~~~l~~~~i~~-iEqP~~~~d~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~i 264 (391)
T 2qgy_A 208 -------DQTKSFLKEVSSFNPYW-IEEPVDGENISLL----TEIKNT-FNMKVVTGEK-QSGLVHFRELI 264 (391)
T ss_dssp -------HHHHHHHHHHGGGCCSE-EECSSCTTCHHHH----HHHHHH-CSSCEEECTT-CCSHHHHHHHH
T ss_pred -------HHHHHHHHHHHhcCCCe-EeCCCChhhHHHH----HHHHhh-CCCCEEEcCC-cCCHHHHHHHH
Confidence 2333334444 357776 579875 44443 333432 3689877643 56677777655
No 332
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=22.82 E-value=6e+02 Score=25.63 Aligned_cols=143 Identities=9% Similarity=0.107 Sum_probs=75.1
Q ss_pred CCcCEEEecCC----------CCCCC---chhHHHHHHHHHhhcCCceeEEe--ccccC-CHHHHHHHHHHHHHcCCCEE
Q 008423 16 TTRHSATSRWG----------AGGST---ADLTLDIANRMQNTICVETMMHL--TCTNM-PVEKIDHALQTIKSNGIQNV 79 (566)
Q Consensus 16 ~~p~fVsVTwg----------agG~~---~~~Sl~la~~lq~~~Gle~i~HL--TCrd~-n~~~L~~~L~~a~~~GIrNI 79 (566)
...|.|+|.-+ .|++. .....+++..+++..++++..-+ ...+. +.+.+.+....+.++|+.-|
T Consensus 82 ~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I 161 (350)
T 3b0p_A 82 FGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVF 161 (350)
T ss_dssp TTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEE
Confidence 34677777643 23321 23456777777777788877633 33333 33467777888899999998
Q ss_pred EEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCC
Q 008423 80 LALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGA 159 (566)
Q Consensus 80 LaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGA 159 (566)
.+-.+.... +.........-....++++.|++..++ .-|-+.| | ..+. ++...+. + ||
T Consensus 162 ~V~~r~~~~-g~~g~~~~~~~~~~~~~i~~ik~~~~~-iPVianG---g---I~s~----------eda~~~l---~-Ga 219 (350)
T 3b0p_A 162 VVHARSALL-ALSTKANREIPPLRHDWVHRLKGDFPQ-LTFVTNG---G---IRSL----------EEALFHL---K-RV 219 (350)
T ss_dssp EEECSCBC-----------CCCCCHHHHHHHHHHCTT-SEEEEES---S---CCSH----------HHHHHHH---T-TS
T ss_pred EEecCchhc-ccCcccccCCCcccHHHHHHHHHhCCC-CeEEEEC---C---cCCH----------HHHHHHH---h-CC
Confidence 875443211 100000000011246788888887632 3333332 1 1111 3344333 3 89
Q ss_pred cEEE--eccCCCHHHHHHHHHHH
Q 008423 160 DLII--TQLFYDTDMFLKFVNDC 180 (566)
Q Consensus 160 dFiI--TQlffD~d~f~~f~~~~ 180 (566)
|.++ +.+.-|++.+.++.+.+
T Consensus 220 D~V~iGRa~l~~P~l~~~i~~~l 242 (350)
T 3b0p_A 220 DGVMLGRAVYEDPFVLEEADRRV 242 (350)
T ss_dssp SEEEECHHHHHCGGGGTTHHHHT
T ss_pred CEEEECHHHHhCcHHHHHHHHHh
Confidence 9764 34555666665555443
No 333
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=22.81 E-value=3.5e+02 Score=22.96 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=64.4
Q ss_pred eEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCC
Q 008423 51 MMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHP 130 (566)
Q Consensus 51 i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHp 130 (566)
..++++.+.+...++..-..+...|+.|+-.+.||... .+ .. ..|.+-++..| .
T Consensus 57 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~----------~~----------~~---~~~D~i~~~~~-~-- 110 (183)
T 2yxd_A 57 CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED----------VL----------DK---LEFNKAFIGGT-K-- 110 (183)
T ss_dssp SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH----------HG----------GG---CCCSEEEECSC-S--
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc----------cc----------cC---CCCcEEEECCc-c--
Confidence 35789999999999988888888998888777777531 00 00 13555555555 1
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcE
Q 008423 131 DTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPI 189 (566)
Q Consensus 131 e~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPI 189 (566)
+ .+.-++.+.+. .|..++++- ...+.+.++.+.+++.|.++-+
T Consensus 111 ---~---------~~~~l~~~~~~--~gG~l~~~~--~~~~~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 111 ---N---------IEKIIEILDKK--KINHIVANT--IVLENAAKIINEFESRGYNVDA 153 (183)
T ss_dssp ---C---------HHHHHHHHHHT--TCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEE
T ss_pred ---c---------HHHHHHHHhhC--CCCEEEEEe--cccccHHHHHHHHHHcCCeEEE
Confidence 1 12445555544 777777765 4567778888899998865443
No 334
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=22.80 E-value=3.6e+02 Score=28.13 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=89.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC---Cccc-cCC-------CcccHHHHHHHHHHHcCCceeEEEEecC
Q 008423 58 NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD---KFVQ-IQG-------GFACALDLVKHIRSAYGDYFGITVAGYP 126 (566)
Q Consensus 58 d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~---~~~~-~~~-------~F~~A~dLVk~Ir~~~gd~F~IGVAgyP 126 (566)
..+.+++.+.++++.+.|.+.|=+=-|..+...+ .... ..+ .....++.|+.||+..|+.+.|.+=++
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN- 230 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVH- 230 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECT-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECC-
Confidence 4578888888899999999988654443211000 0000 001 133467789999999988888887554
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHH
Q 008423 127 EGHPDTIGPDGVASNESYQSDLLYLKKKVD-AGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 127 EgHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~ 205 (566)
.+ .+. .+..++.++++ .|.+| |=|++- .+.+ ..+.++|+. ..+||..|=. +.+...+.++
T Consensus 231 ~~----~~~----------~~A~~~~~~Le~~~i~~-iEqP~~-~~d~-~~~~~l~~~-~~iPIa~dE~-~~~~~~~~~l 291 (422)
T 3tji_A 231 ER----LFP----------QQAVQLAKQLEPFQPYF-IEDILP-PQQS-AWLEQVRQQ-SCVPLALGEL-FNNPAEWHDL 291 (422)
T ss_dssp TC----SCH----------HHHHHHHHHHGGGCCSE-EECCSC-GGGG-GGHHHHHHH-CCCCEEECTT-CCSGGGTHHH
T ss_pred CC----CCH----------HHHHHHHHHHHhhCCCe-EECCCC-hhhH-HHHHHHHhh-CCCCEEEeCC-cCCHHHHHHH
Confidence 11 122 34455555554 45554 579986 2222 223445443 4689887744 5566666655
Q ss_pred hc--cCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 206 TG--FCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 206 ~~--l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
.+ .+.+-.|+- .+-=|+.-+.+++......|++
T Consensus 292 l~~ga~d~v~~k~--------------~~~GGit~~~kia~lA~a~gv~ 326 (422)
T 3tji_A 292 IVNRRIDFIRCHV--------------SQIGGITPALKLAHLCQAFGVR 326 (422)
T ss_dssp HHTTCCSEECCCG--------------GGGTSHHHHHHHHHHHHHTTCE
T ss_pred HhcCCCCEEecCc--------------cccCCHHHHHHHHHHHHHcCCE
Confidence 43 232222211 1222566666666666667643
No 335
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=22.71 E-value=3.5e+02 Score=27.21 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.+=+ ..+| ....+.|+.+|+..|+.+.|.+=++ .+ .+.+
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKi-k~~~--------------~~~~e~v~avr~~~g~~~~l~vDan-~~----~~~~--- 197 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKL-KIEP--------------GWDVEPVRAVRERFGDDVLLQVDAN-TA----YTLG--- 197 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE-ECBT--------------TBSHHHHHHHHHHHCTTSEEEEECT-TC----CCGG---
T ss_pred CHHHHHHHHHHHHHhCccEEEE-ecCc--------------hhHHHHHHHHHHhcCCCceEEEecc-CC----CCHH---
Confidence 6777778888888899887753 2221 2357889999999987788877554 11 2222
Q ss_pred CccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCHHH
Q 008423 140 SNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPAEI 217 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~~i 217 (566)
+ ++.+++=-+.|.+| |=|++- .+.+. ...++++. ..+||..+=. +.+...+.++.+. +.+-.+
T Consensus 198 ------~-~~~~~~l~~~~i~~-iE~P~~-~~~~~-~~~~l~~~-~~ipIa~dE~-~~~~~~~~~~i~~~~~d~v~i--- 262 (368)
T 1sjd_A 198 ------D-APQLARLDPFGLLL-IEQPLE-EEDVL-GHAELARR-IQTPICLDES-IVSARAAADAIKLGAVQIVNI--- 262 (368)
T ss_dssp ------G-HHHHHTTGGGCCSE-EECCSC-TTCHH-HHHHHHTT-CSSCEEESTT-CCSHHHHHHHHHTTCCSEEEE---
T ss_pred ------H-HHHHHHHHhcCCCe-EeCCCC-hhhHH-HHHHHHHh-CCCCEEECCC-cCCHHHHHHHHHcCCCCEEEe---
Confidence 3 44444322356765 679874 23322 23344443 4689877754 6788877765532 222222
Q ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 218 TAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 218 l~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
++. +-=|+.-+.++++...++|++
T Consensus 263 --k~~---------~~GGit~~~~i~~~A~~~g~~ 286 (368)
T 1sjd_A 263 --KPG---------RVGGYLEARRVHDVCAAHGIP 286 (368)
T ss_dssp --CTT---------TTTSHHHHHHHHHHHHHTTCC
T ss_pred --ccc---------ccCCHHHHHHHHHHHHHcCCc
Confidence 111 111566677777777777755
No 336
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=22.53 E-value=1.2e+02 Score=32.62 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcCCcEEEeccC-CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHH
Q 008423 146 SDLLYLKKKVDAGADLIITQLF-YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRM 205 (566)
Q Consensus 146 ~dl~~Lk~KvdAGAdFiITQlf-fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~ 205 (566)
...+++++-+++|||+|+-..- -+...+.++++.+++.--++||++|- +.+...++.+
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~--v~t~e~a~~l 287 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN--IATAEAAKAL 287 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE--ECSHHHHHHH
T ss_pred chHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee--eCcHHHHHHH
Confidence 3577788888999999873221 13456678888888864468999872 3455555544
No 337
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=22.49 E-value=1.2e+02 Score=31.54 Aligned_cols=92 Identities=17% Similarity=0.182 Sum_probs=54.0
Q ss_pred HHHHHHHHHcCCceeEEEEecCC-CCCCCCCCCCCCCccchHHHHHHHHHHHHcCCc--EEEeccCC------CHHHHHH
Q 008423 105 DLVKHIRSAYGDYFGITVAGYPE-GHPDTIGPDGVASNESYQSDLLYLKKKVDAGAD--LIITQLFY------DTDMFLK 175 (566)
Q Consensus 105 dLVk~Ir~~~gd~F~IGVAgyPE-gHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAd--FiITQlff------D~d~f~~ 175 (566)
+.|+.||+..|+...|.+=+|-. +-....+. ++-++++++=.+.|.. ..|=|++- |.+.+.+
T Consensus 220 ~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~---------~~A~~~~~~L~~~~~~~~l~iEqP~~~~~~~~d~~~~~~ 290 (413)
T 1kko_A 220 DRILSLRSSPRYHPTLHIDVYGTIGLIFDMDP---------VRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTA 290 (413)
T ss_dssp HHHHHHCSSTTCCCEEEEECTTHHHHHTTTCH---------HHHHHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCeEEEECCCccccccCCCH---------HHHHHHHHHHHhccCCcceEEECCcCCCCCcccHHHHHH
Confidence 56777877777666666554420 00001122 1223333333233544 48999997 5566666
Q ss_pred HHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 176 FVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 176 f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
+.+++.++|..+||..|= -+.+...++++.
T Consensus 291 l~~~l~~~g~~ipIa~dE-~~~~~~~~~~~i 320 (413)
T 1kko_A 291 ITKELTRLGSGVKIVADE-WCNTYQDIVDFT 320 (413)
T ss_dssp HHHHHHHHTCCCEEEECT-TCCSHHHHHHHH
T ss_pred HHHhcccCCCCCcEEcCC-CCCCHHHHHHHH
Confidence 655666667889999987 477888777765
No 338
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=22.39 E-value=2e+02 Score=30.50 Aligned_cols=57 Identities=18% Similarity=0.230 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCcEEEeccCC-CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 148 LLYLKKKVDAGADLIITQLFY-DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 148 l~~Lk~KvdAGAdFiITQlff-D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
.+++++=+++|+|+++....+ +.....+.++.+|+.--.+||+.| -+.+...++++.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g--~~~t~e~a~~l~ 296 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG--NVATPEGTEALI 296 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE--EECSHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC--CcCCHHHHHHHH
Confidence 556777788999998865543 344566778888876224888765 245565555443
No 339
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=22.34 E-value=4.3e+02 Score=26.38 Aligned_cols=75 Identities=11% Similarity=0.151 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ 182 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~ 182 (566)
..++++.+++.....|.+++.... | ...+.++.=+++|+|+|++-.- ++ .++++.+++
T Consensus 65 l~~~i~~i~~~~~~p~gVnl~~~~---~---------------~~~~~~~~~~~~g~d~V~l~~g-~p---~~~~~~l~~ 122 (326)
T 3bo9_A 65 LRKAISELRQKTDKPFGVNIILVS---P---------------WADDLVKVCIEEKVPVVTFGAG-NP---TKYIRELKE 122 (326)
T ss_dssp HHHHHHHHHTTCSSCEEEEEETTS---T---------------THHHHHHHHHHTTCSEEEEESS-CC---HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEeccC---C---------------CHHHHHHHHHHCCCCEEEECCC-Cc---HHHHHHHHH
Confidence 455666676544334666655411 1 1123334445689999887443 33 345666777
Q ss_pred cCCCCcEEeeecccCCHHHHHH
Q 008423 183 IGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 183 ~Gi~vPIIpGImPI~s~~~~~r 204 (566)
.| +||++++. +.+.+.+
T Consensus 123 ~g--~~v~~~v~---s~~~a~~ 139 (326)
T 3bo9_A 123 NG--TKVIPVVA---SDSLARM 139 (326)
T ss_dssp TT--CEEEEEES---SHHHHHH
T ss_pred cC--CcEEEEcC---CHHHHHH
Confidence 66 77888764 4444443
No 340
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=22.30 E-value=3e+02 Score=22.00 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=39.5
Q ss_pred cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHH
Q 008423 102 CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 102 ~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R 181 (566)
.+.++++.||+.++.--.|-+.+++.. ....+=.++||+-+++-+ ++.+.+.+-++.+-
T Consensus 60 ~g~~~~~~l~~~~~~~~ii~~s~~~~~--------------------~~~~~~~~~g~~~~l~kp-~~~~~l~~~i~~~~ 118 (134)
T 3f6c_A 60 NGIQVLETLRKRQYSGIIIIVSAKNDH--------------------FYGKHCADAGANGFVSKK-EGMNNIIAAIEAAK 118 (134)
T ss_dssp CHHHHHHHHHHTTCCSEEEEEECC-----------------------CTHHHHHHTTCSEEEEGG-GCTHHHHHHHHHHH
T ss_pred ChHHHHHHHHhcCCCCeEEEEeCCCCh--------------------HHHHHHHHhCCCEEEeCC-CCHHHHHHHHHHHH
Confidence 378899999987654334444443321 112344578999999999 47777777777766
Q ss_pred HcC
Q 008423 182 QIG 184 (566)
Q Consensus 182 ~~G 184 (566)
+.+
T Consensus 119 ~~~ 121 (134)
T 3f6c_A 119 NGY 121 (134)
T ss_dssp TTC
T ss_pred CCC
Confidence 544
No 341
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=22.18 E-value=3.3e+02 Score=28.97 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=61.6
Q ss_pred chHHHHHHHHH--HHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCc-EEeeecccC-----CHHHHHHHhccCCCCCC
Q 008423 143 SYQSDLLYLKK--KVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCP-IVPGIMPIN-----NYKGFLRMTGFCKTKIP 214 (566)
Q Consensus 143 ~~~~dl~~Lk~--KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vP-IIpGImPI~-----s~~~~~r~~~l~Gv~VP 214 (566)
++++.++.+.+ ++..|+.-+==-.-||.+.+.+|.+.|++.|+.+. |-|.++.=. +|. .|
T Consensus 77 ~~~e~~~d~~~v~~l~~~~~~v~lH~p~d~~d~~~lk~~l~e~GL~l~~i~~~~f~hp~~~~~~Y~--------~G---- 144 (438)
T 3m0m_A 77 GIFDKLDDCAVIQQLTRATPNVSLHIPWDKADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYK--------YG---- 144 (438)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEEETTTTCCCHHHHHHHHHHHTCEEEEEECCCSSCCTTCSSCCT--------TC----
T ss_pred CHHHHHHHHHHHhcccCCCcceeecCCccHHHHHHHHHHHHHcCCceEEeecccccCchhcccccc--------cC----
Confidence 44455555543 55555432222233433677778888888997643 333332111 110 00
Q ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEc-------C--CchHHHHHHHHHcC
Q 008423 215 AEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYT-------L--NMEKSALAILLNLG 273 (566)
Q Consensus 215 ~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~GiHfyT-------l--N~e~~v~~IL~~l~ 273 (566)
...+.|+++++.+++.+.+.++...+.|.+.+-|.. . +.++...++.+.|.
T Consensus 145 --------nLtspD~~vR~~Ai~~lk~~Id~A~~LGa~~lv~w~GdG~~~~~~~d~~~a~~rl~esL~ 204 (438)
T 3m0m_A 145 --------SLSHTNAATRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNFPGQSNFTRAFERYLSAMA 204 (438)
T ss_dssp --------STTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCCEESSTTTSCHHHHHHHHHHHHH
T ss_pred --------CCCCcCHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCCccCCCCcCCHHHHHHHHHHHHH
Confidence 112345678999998888888877777766655432 2 35666666666664
No 342
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=22.18 E-value=1.9e+02 Score=26.85 Aligned_cols=58 Identities=14% Similarity=0.224 Sum_probs=44.6
Q ss_pred CCCchh-HHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHc-CCCEEEEecCCC
Q 008423 29 GSTADL-TLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSN-GIQNVLALRGDP 86 (566)
Q Consensus 29 G~~~~~-Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~-GIrNILaLrGDp 86 (566)
|++++. ..+=|....+++|++.-.++..-.++.+.+.+.+..+.+. |++=|.+..|-.
T Consensus 10 gs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~a 69 (159)
T 3rg8_A 10 GSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRS 69 (159)
T ss_dssp SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSS
T ss_pred CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCch
Confidence 444443 3334444444799999999999999999999999999876 799999888764
No 343
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=22.08 E-value=2.1e+02 Score=29.62 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=57.9
Q ss_pred EeccccCCHHHHH-H-------HHHHHH-HcCCCEEEEecCC---------CCC--C-CCCccc--cCCCcccHHHHHHH
Q 008423 53 HLTCTNMPVEKID-H-------ALQTIK-SNGIQNVLALRGD---------PPH--G-QDKFVQ--IQGGFACALDLVKH 109 (566)
Q Consensus 53 HLTCrd~n~~~L~-~-------~L~~a~-~~GIrNILaLrGD---------pp~--~-~~~~~~--~~~~F~~A~dLVk~ 109 (566)
+-+++-|+.++|+ + ....|+ ++|++-|=+=.|- |.. - .+.|-. .........++|+.
T Consensus 157 ~~~pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~a 236 (379)
T 3aty_A 157 YGVPEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKS 236 (379)
T ss_dssp CCCCEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHH
T ss_pred CCCCccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHH
Confidence 4567889998888 3 344557 8999988765442 211 0 111100 01122347888999
Q ss_pred HHHHcCCceeEEEEecCCCCCC-CCCCCCCCCccchHHHHHHHHHHH-HcCCcEEE
Q 008423 110 IRSAYGDYFGITVAGYPEGHPD-TIGPDGVASNESYQSDLLYLKKKV-DAGADLII 163 (566)
Q Consensus 110 Ir~~~gd~F~IGVAgyPEgHpe-~~~~~~~~~~~~~~~dl~~Lk~Kv-dAGAdFiI 163 (566)
||+..|+. .|++=..|...-. .... ....+..++.+++ ++|+|||-
T Consensus 237 Vr~avg~~-~v~vRis~~~~~~~~~~~-------~~~~~~~~la~~l~~~Gvd~i~ 284 (379)
T 3aty_A 237 VCDAVGSD-RVGLRISPLNGVHGMIDS-------NPEALTKHLCKKIEPLSLAYLH 284 (379)
T ss_dssp HHHHHCGG-GEEEEECTTCCGGGCCCS-------CHHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHhcCCC-eEEEEECcccccccCCCC-------CCHHHHHHHHHHHHHhCCCEEE
Confidence 99988865 4888766643100 0000 1114455555555 57899863
No 344
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=21.94 E-value=6.1e+02 Score=25.36 Aligned_cols=186 Identities=12% Similarity=0.144 Sum_probs=111.4
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccc-cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccc-cCCCcccHHHHHHHH
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCT-NMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQ-IQGGFACALDLVKHI 110 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCr-d~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~-~~~~F~~A~dLVk~I 110 (566)
+.-+..++.+.+...++++.-+-.- +.+.+.+.+....+.++|+.-|-+=-|..|+.-.+-.. .--......+-|+.+
T Consensus 64 ~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa 143 (295)
T 1xg4_A 64 DDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAA 143 (295)
T ss_dssp HHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHH
Confidence 4456666777766677777766543 22778888888888889999998776664432111000 000112344455555
Q ss_pred HHHc-CCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcE
Q 008423 111 RSAY-GDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPI 189 (566)
Q Consensus 111 r~~~-gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPI 189 (566)
++.. +..|.|-+=.--.. ....++-+++.+.=.+||||.|+--..-|.+.+.++.+.+. +|+
T Consensus 144 ~~a~~~~~~~i~aRtda~~------------~~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~ 206 (295)
T 1xg4_A 144 VDAKTDPDFVIMARTDALA------------VEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPI 206 (295)
T ss_dssp HHHCSSTTSEEEEEECCHH------------HHCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCB
T ss_pred HHhccCCCcEEEEecHHhh------------hcCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCE
Confidence 5442 22354433221000 01234678999999999999998888888899888887763 788
Q ss_pred Eeee-----cccCCHHHHHHHhccCCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 190 VPGI-----MPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 190 IpGI-----mPI~s~~~~~r~~~l~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
+.-+ .|..+.+.+.. .-...+.+|...+... +.-+.+..+.|++.|
T Consensus 207 ~~N~~~~g~~p~~~~~eL~~-~G~~~v~~~~~~~~aa--------------~~a~~~~~~~i~~~g 257 (295)
T 1xg4_A 207 LANITEFGATPLFTTDELRS-AHVAMALYPLSAFRAM--------------NRAAEHVYNVLRQEG 257 (295)
T ss_dssp EEECCSSSSSCCCCHHHHHH-TTCSEEEESSHHHHHH--------------HHHHHHHHHHHHHHS
T ss_pred EEEecccCCCCCCCHHHHHH-cCCCEEEEChHHHHHH--------------HHHHHHHHHHHHHhC
Confidence 6533 36777776654 3345566776655432 223345666677655
No 345
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=21.88 E-value=82 Score=25.46 Aligned_cols=36 Identities=22% Similarity=0.252 Sum_probs=30.1
Q ss_pred CCCCCCHhHHHHHHHHhhcCCcCCccCCCCCCCChhHHHHHHHHHHHHhcCceeec
Q 008423 357 AVPLKSVEDIYEKFKNYCLGKLRSSPWSELDGLQPETKIINEQLGKINVKGFLTIN 412 (566)
Q Consensus 357 g~p~~~~~di~~~f~~y~~g~~~~lPw~~~~~l~~et~~i~~~L~~ln~~g~~ti~ 412 (566)
|.| .|..||.+.| ++|+ .+|+..|.+|-++|++.-.
T Consensus 22 g~~-psv~EIa~~l-----------------gvS~--~TVrr~L~~Le~kG~I~R~ 57 (77)
T 2jt1_A 22 GAP-VKTRDIADAA-----------------GLSI--YQVRLYLEQLHDVGVLEKV 57 (77)
T ss_dssp TSC-EEHHHHHHHH-----------------TCCH--HHHHHHHHHHHHTTSEEEE
T ss_pred CCC-cCHHHHHHHH-----------------CCCH--HHHHHHHHHHHHCCcEEec
Confidence 888 8899998876 5774 4499999999999999763
No 346
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=21.71 E-value=6e+02 Score=25.21 Aligned_cols=145 Identities=14% Similarity=0.124 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.+++.+...++.+.|.+.+=+=-|+ ......+.|+.||+. |+.+.|.+=++ .+ .+.
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~-------------~~~~d~~~v~avr~~-g~~~~l~vDan-~~----~~~---- 195 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGE-------------NLKEDIEAVEEIAKV-TRGAKYIVDAN-MG----YTQ---- 195 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS-------------CHHHHHHHHHHHHHH-STTCEEEEECT-TC----SCH----
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecC-------------CHHHHHHHHHHHHhh-CCCCeEEEECC-CC----CCH----
Confidence 67777778888889999888753332 123467889999998 87788877543 11 122
Q ss_pred CccchHHHHHHHHHHHHcCCc--EEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc--cCCCCCCH
Q 008423 140 SNESYQSDLLYLKKKVDAGAD--LIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG--FCKTKIPA 215 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdAGAd--FiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~--l~Gv~VP~ 215 (566)
++-++.+++=-+.|.+ | |=|++- .+.+.. ..++++. ..+||..|=. +.+...+.++.+ .+.+-.+
T Consensus 196 -----~~a~~~~~~l~~~~i~~~~-iE~P~~-~~~~~~-~~~l~~~-~~ipia~dE~-~~~~~~~~~~i~~~~~d~v~i- 264 (345)
T 2zad_A 196 -----KEAVEFARAVYQKGIDIAV-YEQPVR-REDIEG-LKFVRFH-SPFPVAADES-ARTKFDVMRLVKEEAVDYVNI- 264 (345)
T ss_dssp -----HHHHHHHHHHHHTTCCCSE-EECCSC-TTCHHH-HHHHHHH-SSSCEEESTT-CCSHHHHHHHHHHTCCSEEEE-
T ss_pred -----HHHHHHHHHHHhcCCCeee-eeCCCC-cccHHH-HHHHHHh-CCCCEEEeCC-cCCHHHHHHHHHhCCCCEEEE-
Confidence 1323444332335666 5 679874 233322 3334433 3689877754 557776665442 2222222
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
| -.+ =|+.-+.++++...+.|++
T Consensus 265 ---------k----~~~-GGit~~~~i~~~A~~~g~~ 287 (345)
T 2zad_A 265 ---------K----LMK-SGISDALAIVEIAESSGLK 287 (345)
T ss_dssp ---------C----HHH-HHHHHHHHHHHHHHTTTCE
T ss_pred ---------e----ccc-ccHHHHHHHHHHHHHcCCe
Confidence 1 135 6788888888888877753
No 347
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=21.64 E-value=3e+02 Score=26.61 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCce-eEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEE--EeccCCCHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYF-GITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLI--ITQLFYDTDMFLKFVND 179 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F-~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFi--ITQlffD~d~f~~f~~~ 179 (566)
...+|..+-+..|-.. .+|... |- .++....++. ++|.| -+-+-.....+.+.++.
T Consensus 139 G~~iva~~L~~~G~~Vi~LG~~v-p~------------------e~l~~~~~~~--~~d~V~lS~l~~~~~~~~~~~i~~ 197 (258)
T 2i2x_B 139 GKNIVTALLRANGYNVVDLGRDV-PA------------------EEVLAAVQKE--KPIMLTGTALMTTTMYAFKEVNDM 197 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEC-CS------------------HHHHHHHHHH--CCSEEEEECCCTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEECCCCC-CH------------------HHHHHHHHHc--CCCEEEEEeeccCCHHHHHHHHHH
Confidence 7778887666777332 344432 10 3454444444 56643 33345677889999999
Q ss_pred HHHcCCCCcEEeeecccC
Q 008423 180 CRQIGITCPIVPGIMPIN 197 (566)
Q Consensus 180 ~R~~Gi~vPIIpGImPI~ 197 (566)
+|+.|.++||+.|=.++.
T Consensus 198 l~~~~~~~~v~vGG~~~~ 215 (258)
T 2i2x_B 198 LLENGIKIPFACGGGAVN 215 (258)
T ss_dssp HHTTTCCCCEEEESTTCC
T ss_pred HHhcCCCCcEEEECccCC
Confidence 999999999988876664
No 348
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=21.53 E-value=6.4e+02 Score=25.51 Aligned_cols=113 Identities=21% Similarity=0.324 Sum_probs=66.9
Q ss_pred ccccC---CHHHHHHHHHHHHHcCCCEEEEecCCCCCC--------------------CC-CccccCCCcccHHH----H
Q 008423 55 TCTNM---PVEKIDHALQTIKSNGIQNVLALRGDPPHG--------------------QD-KFVQIQGGFACALD----L 106 (566)
Q Consensus 55 TCrd~---n~~~L~~~L~~a~~~GIrNILaLrGDpp~~--------------------~~-~~~~~~~~F~~A~d----L 106 (566)
|||.. +++..+..++.+++.||+.++++.||-+-. .| ......-+|+.|+. .
T Consensus 70 ssR~~~~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTIDNDl~~td~t~GfdTA~~~~~~a 149 (319)
T 1zxx_A 70 SARYPEFAEEEGQLAGIEQLKKHGIDAVVVIGGDGSYHGALQLTRHGFNSIGLPGTIDNDIPYTDATIGYDTACMTAMDA 149 (319)
T ss_dssp CCCCGGGTSHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEEETTCCCTTCSCCEEHHHHHHHHHHH
T ss_pred cCCCCccCCHHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHhCCCEEEEeecccCCCCCCcCCCCHHHHHHHHHHH
Confidence 45543 567888889999999999999999986421 00 00012345776554 3
Q ss_pred HHHHHHH---cCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEe-ccCCCHHHHHHHHHHHHH
Q 008423 107 VKHIRSA---YGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIIT-QLFYDTDMFLKFVNDCRQ 182 (566)
Q Consensus 107 Vk~Ir~~---~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiIT-QlffD~d~f~~f~~~~R~ 182 (566)
|..|+.. +.-.|-|=|-|---|| -.|..=+..|||+++. -.-||.+.+.+.+++.++
T Consensus 150 id~i~~ta~s~~rv~iVEvMGR~aG~-------------------lAl~a~lA~ga~~iliPE~~~~~~~i~~~i~~~~~ 210 (319)
T 1zxx_A 150 IDKIRDTASSHHRVFIVNVMGRNCGD-------------------IAMRVGVACGADAIVIPERPYDVEEIANRLKQAQE 210 (319)
T ss_dssp HHHHHHHHHHTTCEEEEEECCTTCCH-------------------HHHHHHHHTTCSEEECTTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCHHH-------------------HHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4444432 3223444344422222 2345555678888766 456888888777777766
Q ss_pred cCCC
Q 008423 183 IGIT 186 (566)
Q Consensus 183 ~Gi~ 186 (566)
.|..
T Consensus 211 ~gk~ 214 (319)
T 1zxx_A 211 SGKD 214 (319)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 5544
No 349
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=21.29 E-value=1.3e+02 Score=27.77 Aligned_cols=67 Identities=4% Similarity=-0.006 Sum_probs=45.6
Q ss_pred cchhhccCCCcCEEEecCCCCCC-----CchhHHHHHHHHHhhcCCceeEEeccccC---CHHHHHHHHHHHHHcC
Q 008423 8 SGWTAWWPTTRHSATSRWGAGGS-----TADLTLDIANRMQNTICVETMMHLTCTNM---PVEKIDHALQTIKSNG 75 (566)
Q Consensus 8 ~~~~~~~~~~p~fVsVTwgagG~-----~~~~Sl~la~~lq~~~Gle~i~HLTCrd~---n~~~L~~~L~~a~~~G 75 (566)
.|...++++.+..+.+|.|..+. ..... .....+-..+|++.+..+.+.+. +.++.+++|+++.+.|
T Consensus 111 ~~~~~~l~gK~~~~i~t~g~~~~y~~~~~~~~~-~~l~~~l~~~G~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~ 185 (196)
T 3lcm_A 111 VGLEGHLQGKSAWIITTHNTPSFAMPFVQDYGK-VLKKQILKPCAISPVKLTELTSIEKISDDERQKLLHKVAQIT 185 (196)
T ss_dssp SSEEESCTTCEEEEEEECSSCGGGTTTSSCTTH-HHHHHTTGGGTCCCEEEEEECSTTTSCHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCEEEEEEcCCCchhhHhhhccCHH-HHHHHHHHhcCCceeeEEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence 34456788889888888765410 01112 23344445789999999988776 5688899999998765
No 350
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=21.22 E-value=1.7e+02 Score=24.93 Aligned_cols=60 Identities=17% Similarity=0.291 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHhcCceeecCCCCCCCCCCCCCcccccCCCceeeeeeeeeeecChhhHHHHHHhhcCCCcee
Q 008423 393 TKIINEQLGKINVKGFLTINSQPAVNGERSDSSSVGWGGPGGYVYQKAYLEFFCSPEKLTALVDKSKALPFIT 465 (566)
Q Consensus 393 t~~i~~~L~~ln~~g~~ti~SQP~vng~~S~d~~~GwGp~~GyvyQKay~Eff~~~~~~~~l~~~~~~~~~~~ 465 (566)
...+...|.+|-+.|+++-- ++.-+.+..|++ -.+|++..+.++..+.+.+.|.+.|.|.
T Consensus 32 ~~tv~~~l~~L~~~G~i~~~------~~~~~~~~~g~~-------~~~~v~~~~~~~~~~~~~~~l~~~~~v~ 91 (141)
T 1i1g_A 32 ETAVRKRVKALEEKGIIEGY------TIKINPKKLGYS-------LVTITGVDTKPEKLFEVAEKLKEYDFVK 91 (141)
T ss_dssp HHHHHHHHHHHHHHTSSCCC------CCCCCSGGGTCC-------EEEEEEEEECGGGHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHHHHCCCEecc------ccccChHHhCcc-------EEEEEEEEECchhHHHHHHHHhcCCCeE
Confidence 45689999999999998521 111112223331 3589999999999999999999888765
No 351
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=21.21 E-value=85 Score=33.53 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=44.0
Q ss_pred EEEecCCCCCCCchhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 008423 20 SATSRWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDP 86 (566)
Q Consensus 20 fVsVTwgagG~~~~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDp 86 (566)
.+++--|+|| .|+.+|+.+.. . -++++.|.+...++..-..+..+|+.||.++.||.
T Consensus 109 VLDlcaGpGg----kt~~lA~~~~~-~-----g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da 165 (456)
T 3m4x_A 109 VLDLCAAPGG----KSTQLAAQMKG-K-----GLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAP 165 (456)
T ss_dssp EEESSCTTCH----HHHHHHHHHTT-C-----SEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCH
T ss_pred EEEECCCcCH----HHHHHHHHcCC-C-----CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCH
Confidence 4555555554 47777777653 1 37889999999999998999999999999888775
No 352
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=21.04 E-value=2.1e+02 Score=27.71 Aligned_cols=131 Identities=16% Similarity=0.120 Sum_probs=65.4
Q ss_pred hccCCCcCEEEecCCCCCCCchhHHHHHHHHHhhc---------CCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEe
Q 008423 12 AWWPTTRHSATSRWGAGGSTADLTLDIANRMQNTI---------CVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLAL 82 (566)
Q Consensus 12 ~~~~~~p~fVsVTwgagG~~~~~Sl~la~~lq~~~---------Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaL 82 (566)
.+.+...+.|+|-..+. ....++++.+++ . |+.+..=+ |-....+.++..+ .+++-|+++
T Consensus 87 ~~~~aGAd~itvH~ea~----~~~~~~i~~i~~-~~~~~~~~~~g~~~gv~l-~p~Tp~~~l~~~l-----~~~D~vlvM 155 (237)
T 3cu2_A 87 AVVANGANLVTLQLEQY----HDFALTIEWLAK-QKTTYANQVYPVLIGACL-CPETPISELEPYL-----DQIDVIQLL 155 (237)
T ss_dssp HHHHTTCSEEEEETTCT----TSHHHHHHHHTT-CEEEETTEEEECEEEEEE-CTTSCGGGGTTTT-----TTCSEEEEE
T ss_pred HHHHcCCCEEEEecCCc----ccHHHHHHHHHh-cccccccccCCceEEEEE-eCCChHHHHHHHh-----hcCceeeee
Confidence 34455566766665443 113344444443 3 44444433 1122333443333 256767766
Q ss_pred cCCCCCCCCCccccCCCcc-cHHHHHHHHHHHcC---CceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHH--
Q 008423 83 RGDPPHGQDKFVQIQGGFA-CALDLVKHIRSAYG---DYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVD-- 156 (566)
Q Consensus 83 rGDpp~~~~~~~~~~~~F~-~A~dLVk~Ir~~~g---d~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd-- 156 (566)
+=+|--++ ..|. ...+-|+.+|+..+ ..+.|.|.| |- ..+.+++-++
T Consensus 156 sv~pgfgg-------q~f~~~~l~ki~~lr~~~~~~~~~~~I~vdG---GI-----------------~~~~~~~~~~~~ 208 (237)
T 3cu2_A 156 TLDPRNGT-------KYPSELILDRVIQVEKRLGNRRVEKLINIDG---SM-----------------TLELAKYFKQGT 208 (237)
T ss_dssp SEETTTTE-------ECCHHHHHHHHHHHHHHHGGGGGGCEEEEES---SC-----------------CHHHHHHHHHSS
T ss_pred eeccCcCC-------eecChhHHHHHHHHHHHHHhcCCCceEEEEC---Cc-----------------CHHHHHHHHHhC
Confidence 55553332 1233 36777788877643 246788776 11 1334555678
Q ss_pred cCCcEEE-eccCCCHHHHHHHHHHHH
Q 008423 157 AGADLII-TQLFYDTDMFLKFVNDCR 181 (566)
Q Consensus 157 AGAdFiI-TQlffD~d~f~~f~~~~R 181 (566)
||||.+| ==.+|..+ ..+-++.+|
T Consensus 209 aGad~~VvGSaIf~~d-~~~~~~~l~ 233 (237)
T 3cu2_A 209 HQIDWLVSGSALFSGE-LKTNLKVWK 233 (237)
T ss_dssp SCCCCEEECGGGGSSC-HHHHHHHHH
T ss_pred CCCcEEEEeeHHhCCC-HHHHHHHHH
Confidence 9999544 34555332 333344444
No 353
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=20.90 E-value=4.2e+02 Score=25.03 Aligned_cols=57 Identities=14% Similarity=0.108 Sum_probs=32.7
Q ss_pred HHHHHHHH-HHcCCcEEEeccCC-----CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhc
Q 008423 147 DLLYLKKK-VDAGADLIITQLFY-----DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTG 207 (566)
Q Consensus 147 dl~~Lk~K-vdAGAdFiITQlff-----D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~ 207 (566)
++.++.+. .++|||||-|=-.| +.+.+....+.+ |-++||++ .=.|.|.+.+.++.+
T Consensus 133 ~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v---~~~ipVia-~GGI~t~~da~~~l~ 195 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSA---KGRIKVKA-SGGIRDLETAISMIE 195 (225)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHH---TTSSEEEE-ESSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHh---CCCCcEEE-ECCCCCHHHHHHHHH
Confidence 44444444 57899999876544 445544433332 44688753 225667777766543
No 354
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=20.89 E-value=5.5e+02 Score=24.49 Aligned_cols=53 Identities=9% Similarity=-0.093 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEG 128 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEg 128 (566)
.....|.++.++||+.++.+.-+... . ....+++.. +++|.....++..||..
T Consensus 48 ~~~~~l~~~~~~Gv~~iv~~~~~~~~---------~---~~~~~~~~~-~~~~~~v~~~~G~hp~~ 100 (314)
T 2vc7_A 48 NAVNEVKRAMQFGVKTIVDPTVMGLG---------R---DIRFMEKVV-KATGINLVAGTGIYIYI 100 (314)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBTTT---------C---CHHHHHHHH-HHHCCEEEECEEBCCSS
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCC---------c---CHHHHHHHH-HHcCCeEEEEeecCCCC
Confidence 44444688899999999876533211 0 122233333 34664444556678854
No 355
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=20.81 E-value=2e+02 Score=25.99 Aligned_cols=54 Identities=13% Similarity=-0.066 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHhhcCCceeEEeccccCCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 008423 33 DLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPH 88 (566)
Q Consensus 33 ~~Sl~la~~lq~~~Gle~i~HLTCrd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~ 88 (566)
.++-.+++.+.+ .|++++-+.++.| +.+.|.+.|..+.+.+-..+++.+|--..
T Consensus 40 ~ng~~L~~~L~~-~G~~v~~~~iV~D-d~~~i~~al~~~~a~~~~DlVittGG~g~ 93 (178)
T 3iwt_A 40 ESGDIIKQLLIE-NGHKIIGYSLVPD-DKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp HHHHHHHHHHHH-TTCEEEEEEEECS-CHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred chHHHHHHHHHH-CCCEEEEEEEeCC-CHHHHHHHHHHHHhcCCCCEEEecCCccc
Confidence 345567777774 8999988877754 77888899888776655566667776543
No 356
>3oq2_A Crispr-associated protein CAS2; ferredoxin fold, immune system; HET: TRS CIT; 1.35A {Desulfovibrio vulgaris}
Probab=20.77 E-value=1.6e+02 Score=24.93 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=39.1
Q ss_pred eeeeeeeeeeecChhhHHHHHHhhcC-----CCceeEEEEcCCCCccccCCCCCCcceeecccCCCcc
Q 008423 435 YVYQKAYLEFFCSPEKLTALVDKSKA-----LPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEI 497 (566)
Q Consensus 435 yvyQKay~Eff~~~~~~~~l~~~~~~-----~~~~~y~a~n~~g~~~~n~~~~~~navTWGvFpg~ei 497 (566)
.=-|++-.|+.++++++..|..+|++ ..+|.+|-...+.. ....++|.-|..+.
T Consensus 39 ~rvQ~SVFe~~lt~~~~~~L~~~L~~~id~~~Dsv~iy~l~~~~~---------~~~~~~G~~~~~d~ 97 (103)
T 3oq2_A 39 QRVQYSVFECVVDPAQWAKLKHRLLSEMDKEKDCLRFYYLGANWR---------NKVEHVGAKPAYDP 97 (103)
T ss_dssp EEEETTEEEEEECHHHHHHHHHHHHHHSCTTTCEEEEEEEETTGG---------GGEEEEESCCSSST
T ss_pred ccceEEEEEEEcCHHHHHHHHHHHHHhcCCCCCEEEEEEeCcccc---------ceEEEECCCCCCCC
Confidence 44599999999999999999888762 46888888775531 23456676665554
No 357
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=20.63 E-value=72 Score=31.75 Aligned_cols=112 Identities=14% Similarity=0.119 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHH-------HHHcCCceeEEEEecCCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHI-------RSAYGDYFGITVAGYPEGHPDTIGP 135 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~I-------r~~~gd~F~IGVAgyPEgHpe~~~~ 135 (566)
.++..|....+.||+.||.+.. + ....+. .-+.+.++++.. .+.+++.|.=|++.-|-..++
T Consensus 42 d~~~rl~~Md~~Gv~~vl~~~~--~-~~~~~~----d~~~~~~~~r~~N~~l~~~~~~~p~rf~g~~a~vp~~~~~---- 110 (312)
T 3ij6_A 42 DLDERLTKWPDQNTKQVISLAN--I-SPEDFT----DSKTSAELCQSANEELSNLVDQHPGKFAGAVAILPMNNIE---- 110 (312)
T ss_dssp CHHHHHHTCSCTTEEEEEEECS--C-CGGGTS----CHHHHHHHHHHHHHHHHHHHHHCTTTEEEEEEECCTTCHH----
T ss_pred CHHHHHHHHHHcCCeEEEECCC--C-cccccC----CHHHHHHHHHHHHHHHHHHHHhCCCceeeeEEecCccCHH----
Confidence 4567777788899987776632 1 111111 111233333222 235777653256666644321
Q ss_pred CCCCCccchHHHHHHHHHHHHcCCcEEE--ec---cCCCHHHHHHHHHHHHHcCCCCcEEeeec
Q 008423 136 DGVASNESYQSDLLYLKKKVDAGADLII--TQ---LFYDTDMFLKFVNDCRQIGITCPIVPGIM 194 (566)
Q Consensus 136 ~~~~~~~~~~~dl~~Lk~KvdAGAdFiI--TQ---lffD~d~f~~f~~~~R~~Gi~vPIIpGIm 194 (566)
....+++++.+ +.|+.-+. ++ ..++-..+..+.+.|.+.|+.+=|.+|-.
T Consensus 111 -------~a~~el~r~~~--~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~~ 165 (312)
T 3ij6_A 111 -------SACKVISSIKD--DENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFD 165 (312)
T ss_dssp -------HHHHHHHHHHH--CTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCCC
T ss_pred -------HHHHHHHHHHH--hCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCCC
Confidence 01134444422 25654332 22 23466788999999999996666667653
No 358
>1zpw_X Hypothetical protein TT1823; hyphotetical protein, structural genom NPPSFA, national project on protein structural and function analyses; 1.64A {Thermus thermophilus} SCOP: d.58.58.1
Probab=20.61 E-value=1.4e+02 Score=24.70 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=29.5
Q ss_pred eeeeeeeeeeecChhhHHHHHHhhcC-----CCceeEEEEcC
Q 008423 435 YVYQKAYLEFFCSPEKLTALVDKSKA-----LPFITFMAVNK 471 (566)
Q Consensus 435 yvyQKay~Eff~~~~~~~~l~~~~~~-----~~~~~y~a~n~ 471 (566)
.=-|++-.|+.+++.++..|..+|++ ..+|-+|-...
T Consensus 30 ~rvQ~SVFe~~lt~~~~~~L~~~L~~~id~~~Dsv~iy~l~~ 71 (90)
T 1zpw_X 30 ERVQLSVFECYLDERLLEDLRRRARRLLDLGQDALRIYPVAG 71 (90)
T ss_dssp EEEETTEEEEEECHHHHHHHHHHHHHHCCTTTCEEEEEECCS
T ss_pred ccceEeEEEEEcCHHHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 44599999999999999998877762 46788877665
No 359
>3om0_A Glutamate receptor, ionotropic kainate 5; membrane protein, ION channel; HET: NAG BMA GOL; 1.40A {Rattus norvegicus} PDB: 3om1_A* 3qlu_A* 3qlv_A
Probab=20.55 E-value=6.1e+02 Score=24.86 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=52.3
Q ss_pred HHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHH
Q 008423 67 ALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQS 146 (566)
Q Consensus 67 ~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~ 146 (566)
...-++..|.+.|-+|.-|.. + .....++++.+. ..| .+|.+..+| ...+. ..
T Consensus 130 ~~~~~~~~g~~~vaii~~~~~-----~------g~~l~~~~~~~~-~~g--~~v~~~~~~----~~~d~---------~~ 182 (393)
T 3om0_A 130 VSRILKSFNYPSASLICAKAE-----C------LLRLEELVRGFL-ISK--ETLSVRMLD----DSRDP---------TP 182 (393)
T ss_dssp HHHHHHHTTSCCEEEEESSTT-----H------HHHTHHHHHHHH-HSS--SCEEEEECC-----CCCS---------HH
T ss_pred HHHHHHhCCCcEEEEEEeCch-----H------HHHHHHHHHhhh-ccC--CeEEEEecC----CCCCH---------HH
Confidence 334447789999998864321 1 011233344333 244 466555443 11222 25
Q ss_pred HHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCc
Q 008423 147 DLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCP 188 (566)
Q Consensus 147 dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vP 188 (566)
.+.+|++ +++|.|+- +...+....+++++++.|++.+
T Consensus 183 ~l~~i~~---~~~~vii~--~~~~~~~~~~~~~a~~~g~~~~ 219 (393)
T 3om0_A 183 LLKEIRD---DKVSTIII--DANASISHLVLRKASELGMTSA 219 (393)
T ss_dssp HHHHHHH---HTCSEEEE--ESCHHHHHHHHHHHHHTTTTST
T ss_pred HHHHHHh---cCCeEEEE--ECCHHHHHHHHHHHHHcCcccC
Confidence 5666653 58998886 4455667789999999998754
No 360
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=20.54 E-value=6.8e+02 Score=25.42 Aligned_cols=26 Identities=4% Similarity=0.112 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC
Q 008423 60 PVEKIDHALQTIKSNGIQNVLALRGD 85 (566)
Q Consensus 60 n~~~L~~~L~~a~~~GIrNILaLrGD 85 (566)
+++...+.++++.+.|++-|.+-.+-
T Consensus 134 d~~~~~~~~~~a~~~G~~ai~it~d~ 159 (370)
T 1gox_A 134 DRNVVAQLVRRAERAGFKAIALTVDT 159 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CchHHHHHHHHHHHCCCCEEEEeCCC
Confidence 55666778889999999887765553
No 361
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=20.40 E-value=4.6e+02 Score=26.88 Aligned_cols=103 Identities=14% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEE--ecCCCCCCCCCccccCCCcccHHHHHHHHHHHc-CCceeEEEEecCCCCCCCCCCCCCCCc
Q 008423 65 DHALQTIKSNGIQNVLA--LRGDPPHGQDKFVQIQGGFACALDLVKHIRSAY-GDYFGITVAGYPEGHPDTIGPDGVASN 141 (566)
Q Consensus 65 ~~~L~~a~~~GIrNILa--LrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~-gd~F~IGVAgyPEgHpe~~~~~~~~~~ 141 (566)
.+.+..+.+.|+.-|.+ --||+. ...++|+.+|+.+ +-...+|....+
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g~~~--------------~~~e~i~~ir~~~~~~pviv~~v~~~--------------- 205 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHGHST--------------RIIELIKKIKTKYPNLDLIAGNIVTK--------------- 205 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSH--------------HHHHHHHHHHHHCTTCEEEEEEECSH---------------
T ss_pred HHHHHHHHHCCCCEEEEeCCCCChH--------------HHHHHHHHHHHHCCCCeEEEcCCCcH---------------
Q ss_pred cchHHHHHHHHHHHHcCCcEEEe---------------ccCCCHHHHHHHHHHHHHcCCCCcEEe--eecccCCHHHHHH
Q 008423 142 ESYQSDLLYLKKKVDAGADLIIT---------------QLFYDTDMFLKFVNDCRQIGITCPIVP--GIMPINNYKGFLR 204 (566)
Q Consensus 142 ~~~~~dl~~Lk~KvdAGAdFiIT---------------QlffD~d~f~~f~~~~R~~Gi~vPIIp--GImPI~s~~~~~r 204 (566)
++.+.+. ++|||+|+. --.=+.+.+....+.++..+ +|||+ ||.-......+..
T Consensus 206 ----~~a~~a~---~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~--ipVia~GGI~~~~d~~~ala 276 (404)
T 1eep_A 206 ----EAALDLI---SVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTN--ICIIADGGIRFSGDVVKAIA 276 (404)
T ss_dssp ----HHHHHHH---TTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSS--CEEEEESCCCSHHHHHHHHH
T ss_pred ----HHHHHHH---hcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcC--ceEEEECCCCCHHHHHHHHH
Q ss_pred H
Q 008423 205 M 205 (566)
Q Consensus 205 ~ 205 (566)
+
T Consensus 277 ~ 277 (404)
T 1eep_A 277 A 277 (404)
T ss_dssp H
T ss_pred c
No 362
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=20.36 E-value=3e+02 Score=24.80 Aligned_cols=101 Identities=12% Similarity=0.093 Sum_probs=62.4
Q ss_pred EEeccccCCHHHHHHHHHHHHHcCCCE-EEEecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCC
Q 008423 52 MHLTCTNMPVEKIDHALQTIKSNGIQN-VLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHP 130 (566)
Q Consensus 52 ~HLTCrd~n~~~L~~~L~~a~~~GIrN-ILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHp 130 (566)
.|+++.+.+...++.+-..+...|+.+ |-++.||.. +.+..+.......|.+-+...+.
T Consensus 84 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~-----------------~~~~~~~~~~~~~fD~v~~d~~~--- 143 (223)
T 3duw_A 84 GRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL-----------------DSLQQIENEKYEPFDFIFIDADK--- 143 (223)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH-----------------HHHHHHHHTTCCCCSEEEECSCG---
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH-----------------HHHHHHHhcCCCCcCEEEEcCCc---
Confidence 489999999999998888888889865 766666642 22222222221224443332221
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCC------------HHHHHHHHHHHHHc
Q 008423 131 DTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYD------------TDMFLKFVNDCRQI 183 (566)
Q Consensus 131 e~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD------------~d~f~~f~~~~R~~ 183 (566)
.....-++.+.+.+..|.-+++.-+++. ...+.+|.+.++..
T Consensus 144 -----------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~ 197 (223)
T 3duw_A 144 -----------QNNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAE 197 (223)
T ss_dssp -----------GGHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHC
T ss_pred -----------HHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhC
Confidence 0122456777777788888888777775 24556677777664
No 363
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=20.34 E-value=6.5e+02 Score=25.75 Aligned_cols=142 Identities=10% Similarity=-0.035 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHcCCCEEEE-ecCCCCCCCCCccccCCCcccHHHHHHHHHHHcCCceeEEEEecCCCCCCCC-CCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLA-LRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTI-GPDGVAS 140 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILa-LrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~-~~~~~~~ 140 (566)
++.+..+++.+.|.+.+=+ --|.+. ......++.|+.+|+..|+.+.|.+=++ + .. +.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~----------~~~~~d~e~v~avR~a~G~d~~l~vDaN--~---~~~~~----- 219 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKAD----------WSTKEVAYYLRELRGILGHDTDMMVDYL--Y---RFTDW----- 219 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCC----------CCHHHHHHHHHHHHHHHCSSSEEEEECT--T---CCCCH-----
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCc----------cCHHHHHHHHHHHHHHhCCCCeEEEeCC--C---CCCCH-----
Confidence 4445677778899998876 334211 1234578889999999988888887543 1 11 22
Q ss_pred ccchHHHHHHHHHHH-HcCCcEEEeccCC--CHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHhcc--CCCCCCH
Q 008423 141 NESYQSDLLYLKKKV-DAGADLIITQLFY--DTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGF--CKTKIPA 215 (566)
Q Consensus 141 ~~~~~~dl~~Lk~Kv-dAGAdFiITQlff--D~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~~l--~Gv~VP~ 215 (566)
.+..++.+++ +.|.+| |-|++- |.+.+ .++|+. ..+||..|=. +.+...+.++.+. +.+-.|+
T Consensus 220 -----~~A~~~~~~L~~~~i~~-iEeP~~~~d~~~~----~~l~~~-~~iPIa~dE~-~~~~~~~~~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 220 -----YEVARLLNSIEDLELYF-AEATLQHDDLSGH----AKLVEN-TRSRICGAEM-STTRFEAEEWITKGKVHLLQSD 287 (394)
T ss_dssp -----HHHHHHHHHTGGGCCSE-EESCSCTTCHHHH----HHHHHH-CSSCBEECTT-CCHHHHHHHHHHTTCCSEECCC
T ss_pred -----HHHHHHHHHhhhcCCeE-EECCCCchhHHHH----HHHHhh-CCCCEEeCCC-CCCHHHHHHHHHcCCCCeEecC
Confidence 2333344444 346665 579986 44443 444443 3589877643 5667777665432 2222221
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Q 008423 216 EITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG 250 (566)
Q Consensus 216 ~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~G 250 (566)
- .+-=|+.-+.+++......|
T Consensus 288 ~--------------~~~GGit~~~~ia~~A~~~g 308 (394)
T 3mkc_A 288 Y--------------NRCGGLTELRRITEMATANN 308 (394)
T ss_dssp T--------------TTTTHHHHHHHHHHHHHHTT
T ss_pred c--------------cccCCHHHHHHHHHHHHHcC
Confidence 0 12226777777777777776
No 364
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=20.31 E-value=1.8e+02 Score=32.25 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCC-CCcEEeee
Q 008423 145 QSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGI-TCPIVPGI 193 (566)
Q Consensus 145 ~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi-~vPIIpGI 193 (566)
++|...|+.=++.|||||+-=|+=+++...+..+.++++|- +++||+=|
T Consensus 173 ekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakI 222 (587)
T 2e28_A 173 EKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKI 222 (587)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred cccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEE
Confidence 36788899999999999999999999999999999999885 78887765
No 365
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=20.30 E-value=3.7e+02 Score=22.22 Aligned_cols=61 Identities=15% Similarity=0.076 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ 182 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~ 182 (566)
+.++++.||+.++.--.|-+.++.+ .....+-+++||+.+++.++ +.+.+.+-++.+-+
T Consensus 76 g~~~~~~l~~~~~~~~ii~~s~~~~--------------------~~~~~~~~~~g~~~~l~Kp~-~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 76 GAQVAAAVRSYELPTRVLLISAHDE--------------------PAIVYQALQQGAAGFLLKDS-TRTEIVKAVLDCAK 134 (152)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESCCC--------------------HHHHHHHHHTTCSEEEETTC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeEEEEEccCC--------------------HHHHHHHHHcCCCEEEecCC-CHHHHHHHHHHHHc
Confidence 7889999998765333343443221 23345556799999999985 67777766666655
Q ss_pred cC
Q 008423 183 IG 184 (566)
Q Consensus 183 ~G 184 (566)
.+
T Consensus 135 ~~ 136 (152)
T 3eul_A 135 GR 136 (152)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 366
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.30 E-value=3.9e+02 Score=25.64 Aligned_cols=69 Identities=20% Similarity=0.226 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCC-CHHHHHHHHHHH
Q 008423 102 CALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFY-DTDMFLKFVNDC 180 (566)
Q Consensus 102 ~A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlff-D~d~f~~f~~~~ 180 (566)
.+.|+++.|.+.-...=.||+.+|++-- ..++.+.+=. |.+ |.|..| +.+....-++++
T Consensus 91 s~~Dil~aL~~a~~~~~kIavVg~~~~~----------------~~~~~i~~ll--~~~--i~~~~~~~~ee~~~~i~~l 150 (225)
T 2pju_A 91 SGYDVLQFLAKAGKLTSSIGVVTYQETI----------------PALVAFQKTF--NLR--LDQRSYITEEDARGQINEL 150 (225)
T ss_dssp CHHHHHHHHHHTTCTTSCEEEEEESSCC----------------HHHHHHHHHH--TCC--EEEEEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCcEEEEeCchhh----------------hHHHHHHHHh--CCc--eEEEEeCCHHHHHHHHHHH
Confidence 4889988887632222389999999753 4455555543 556 444445 678889999999
Q ss_pred HHcCCCCcEEee
Q 008423 181 RQIGITCPIVPG 192 (566)
Q Consensus 181 R~~Gi~vPIIpG 192 (566)
++.|+++ +.|
T Consensus 151 ~~~G~~v--VVG 160 (225)
T 2pju_A 151 KANGTEA--VVG 160 (225)
T ss_dssp HHTTCCE--EEE
T ss_pred HHCCCCE--EEC
Confidence 9999774 555
No 367
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=20.27 E-value=3.8e+02 Score=27.47 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCcEEEeccC-CCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHHHh
Q 008423 149 LYLKKKVDAGADLIITQLF-YDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMT 206 (566)
Q Consensus 149 ~~Lk~KvdAGAdFiITQlf-fD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r~~ 206 (566)
++++.=+++|||+|+--.- -+.+.+.+.++.+++.- .+||++|- +.+...++++.
T Consensus 108 e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~--v~t~e~A~~l~ 163 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGN--VVTEEATKELI 163 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEE--ECSHHHHHHHH
T ss_pred HHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEcc--CCCHHHHHHHH
Confidence 4455556789998862211 24566777788877763 68888753 35666665543
No 368
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=20.25 E-value=3.2e+02 Score=27.10 Aligned_cols=96 Identities=9% Similarity=0.103 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCCCCCccccCCCcccHHHHHHHHHHH---cCCceeEEEEecCCCCCCCCCCCCCC
Q 008423 63 KIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSA---YGDYFGITVAGYPEGHPDTIGPDGVA 139 (566)
Q Consensus 63 ~L~~~L~~a~~~GIrNILaLrGDpp~~~~~~~~~~~~F~~A~dLVk~Ir~~---~gd~F~IGVAgyPEgHpe~~~~~~~~ 139 (566)
+.......+.+.|++++.+|.-+. .++..+.+..++. .|.. -++...|+.+
T Consensus 109 ~~~~~a~~a~~~g~k~vail~~~~--------------~yG~~~~~~F~~~~~~~Gg~-vv~~~~y~~~----------- 162 (325)
T 2h4a_A 109 EAESAANKMWNDGVRNPLVAMPQN--------------DLGQRVGNAFNVRWQQLAGT-DANIRYYNLP----------- 162 (325)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEESS--------------HHHHHHHHHHHHHHHHHHSS-CCEEEEESST-----------
T ss_pred HHHHHHHHHHHcCCCeEEEEEcCC--------------cHHHHHHHHHHHHHHHcCCC-cceeEecCCH-----------
Confidence 445555566788999999995221 1344444444432 2322 3455566632
Q ss_pred CccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEee
Q 008423 140 SNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPG 192 (566)
Q Consensus 140 ~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpG 192 (566)
.|.....+|+.+++|.|+- +.| .+...-..+.+|..|.++||+.+
T Consensus 163 ------~d~~~~l~~i~~~pDaV~~-~~~-~~~~~~i~~~~~~~g~~~pl~~~ 207 (325)
T 2h4a_A 163 ------ADVTYFVQENNSNTTALYA-VAS-PTELAEXKGYLTNIVPNLAIYAS 207 (325)
T ss_dssp ------THHHHHHHHSTTCCCEEEE-CCC-HHHHHHHHHHHTTTCTTCEEEEC
T ss_pred ------HHHHHHHHhcCCCCCEEEE-eCC-HHHHhhhhhhHhhcCCCCCEEEe
Confidence 2345555666789998775 333 33445556677778999998765
No 369
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=20.17 E-value=5.9e+02 Score=26.09 Aligned_cols=162 Identities=14% Similarity=0.146 Sum_probs=90.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCC-----CccccCCC------cccHHHHHHHHHHHcCCceeEEEEec
Q 008423 57 TNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD-----KFVQIQGG------FACALDLVKHIRSAYGDYFGITVAGY 125 (566)
Q Consensus 57 rd~n~~~L~~~L~~a~~~GIrNILaLrGDpp~~~~-----~~~~~~~~------F~~A~dLVk~Ir~~~gd~F~IGVAgy 125 (566)
...+.+++.+..+++.+.|.+.+=+=-|..+...+ ........ ....++.|+.||+..|+.+.|.+=++
T Consensus 130 ~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan 209 (401)
T 3sbf_A 130 TSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVH 209 (401)
T ss_dssp EESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 34578888888888999999988654343211000 00000001 33467889999999988888887654
Q ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHHHH-cCCcEEEeccCCCHHHHHHHHHHHHHcCCCCcEEeeecccCCHHHHHH
Q 008423 126 PEGHPDTIGPDGVASNESYQSDLLYLKKKVD-AGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 126 PEgHpe~~~~~~~~~~~~~~~dl~~Lk~Kvd-AGAdFiITQlffD~d~f~~f~~~~R~~Gi~vPIIpGImPI~s~~~~~r 204 (566)
- + .+. .+..++.+.++ .|.+| |-|++-. +.+ ..+.++++. ..+||..|=. +.+...+.+
T Consensus 210 ~-~----~~~----------~~A~~~~~~L~~~~i~~-iEqP~~~-~~~-~~~~~l~~~-~~iPIa~dE~-~~~~~~~~~ 269 (401)
T 3sbf_A 210 E-R----LFP----------NQAIQFAKEVEQYKPYF-IEDILPP-NQT-EWLDNIRSQ-SSVSLGLGEL-FNNPEEWKS 269 (401)
T ss_dssp T-C----SCH----------HHHHHHHHHHGGGCCSC-EECSSCT-TCG-GGHHHHHTT-CCCCEEECTT-CCSHHHHHH
T ss_pred C-C----CCH----------HHHHHHHHHHHhcCCCE-EECCCCh-hHH-HHHHHHHhh-CCCCEEeCCc-cCCHHHHHH
Confidence 1 1 122 34444555554 46555 5799852 222 223445543 4689887744 667777776
Q ss_pred Hhcc--CCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Q 008423 205 MTGF--CKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIK 252 (566)
Q Consensus 205 ~~~l--~Gv~VP~~il~~Le~~kddde~vk~~Gv~la~e~i~~L~~~Gv~ 252 (566)
+.+. +.+-.|+- .+-=|+.-+.+++.....+|++
T Consensus 270 ~i~~~~~d~v~~k~--------------~~~GGit~~~kia~~A~~~gi~ 305 (401)
T 3sbf_A 270 LIANRRIDFIRCHV--------------SQIGGITPALKLGHLCQNFGVR 305 (401)
T ss_dssp HHHTTCCSEECCCG--------------GGGTSHHHHHHHHHHHHHHTCE
T ss_pred HHhcCCCCEEecCc--------------cccCCHHHHHHHHHHHHHcCCE
Confidence 6532 33222211 1122566666666666666643
No 370
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=20.12 E-value=3.8e+02 Score=26.58 Aligned_cols=79 Identities=14% Similarity=0.157 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHcCCceeEEEEecCCCCCCCCCCCCCCCccchHHHHHHHHHHHHcCCcEEEeccCCCHHHHHHHHHHHHH
Q 008423 103 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQ 182 (566)
Q Consensus 103 A~dLVk~Ir~~~gd~F~IGVAgyPEgHpe~~~~~~~~~~~~~~~dl~~Lk~KvdAGAdFiITQlffD~d~f~~f~~~~R~ 182 (566)
..+.++.+|+.....|.+++..+|... +. ...+.++.=+++|+|+|++-+-.. .++++.+++
T Consensus 55 l~~~i~~i~~~~~~p~~v~l~v~~~~~----~~----------~~~~~~~~~~~~g~d~V~~~~g~p----~~~~~~l~~ 116 (328)
T 2gjl_A 55 LAAEIARCRELTDRPFGVNLTLLPTQK----PV----------PYAEYRAAIIEAGIRVVETAGNDP----GEHIAEFRR 116 (328)
T ss_dssp HHHHHHHHHHHCSSCCEEEEEECCCSS----CC----------CHHHHHHHHHHTTCCEEEEEESCC----HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEecccccc----Cc----------cHHHHHHHHHhcCCCEEEEcCCCc----HHHHHHHHH
Confidence 345677777665445777777764210 11 112334444568999998765433 356677787
Q ss_pred cCCCCcEEeeecccCCHHHHHH
Q 008423 183 IGITCPIVPGIMPINNYKGFLR 204 (566)
Q Consensus 183 ~Gi~vPIIpGImPI~s~~~~~r 204 (566)
.| +||++.+ .+...+.+
T Consensus 117 ~g--i~vi~~v---~t~~~a~~ 133 (328)
T 2gjl_A 117 HG--VKVIHKC---TAVRHALK 133 (328)
T ss_dssp TT--CEEEEEE---SSHHHHHH
T ss_pred cC--CCEEeeC---CCHHHHHH
Confidence 76 7788664 45544443
No 371
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=20.06 E-value=98 Score=25.22 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=25.5
Q ss_pred EeccccCCH----HHHHHHHHHHHHcCCCEEEEecCC
Q 008423 53 HLTCTNMPV----EKIDHALQTIKSNGIQNVLALRGD 85 (566)
Q Consensus 53 HLTCrd~n~----~~L~~~L~~a~~~GIrNILaLrGD 85 (566)
.|-.++++. ..|+..|..|...|++.++++.|-
T Consensus 6 ~lDLhG~~~~eA~~~l~~fl~~a~~~g~~~v~IIHGk 42 (83)
T 2zqe_A 6 EVDLRGLTVAEALLEVDQALEEARALGLSTLRLLHGK 42 (83)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 444556654 567788888899999999999985
Done!