Query 008424
Match_columns 566
No_of_seqs 253 out of 1374
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 03:14:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008424.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008424hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f48a1 c.89.1.1 (A:4-553) Pyr 100.0 4E-146 3E-150 1200.8 48.6 534 28-562 1-550 (550)
2 d4pfka_ c.89.1.1 (A:) ATP-depe 100.0 1.2E-73 8.7E-78 591.4 36.1 301 94-499 1-302 (319)
3 d1pfka_ c.89.1.1 (A:) ATP-depe 100.0 4.4E-73 3.2E-77 587.3 36.1 300 94-498 2-302 (320)
4 d1z0sa1 e.52.1.1 (A:1-249) Ino 81.4 0.27 2E-05 46.4 2.1 32 188-225 39-70 (249)
5 d1rrma_ e.22.1.2 (A:) Lactalde 80.2 1.4 9.9E-05 43.4 7.1 60 173-232 72-146 (385)
6 d1jq5a_ e.22.1.2 (A:) Glycerol 79.0 1.8 0.00013 42.1 7.6 54 173-231 70-123 (366)
7 d2qv7a1 e.52.1.2 (A:1-312) Dia 77.6 0.91 6.6E-05 43.1 4.6 61 176-244 46-106 (312)
8 d2bona1 e.52.1.2 (A:5-299) Lip 77.0 1.8 0.00013 40.6 6.6 87 176-276 41-129 (295)
9 d1vlja_ e.22.1.2 (A:) NADH-dep 76.9 1.8 0.00013 42.8 6.8 58 173-230 77-147 (398)
10 d1o2da_ e.22.1.2 (A:) Alcohol 75.5 1.9 0.00014 42.1 6.4 60 173-232 71-143 (359)
11 d1u0ta_ e.52.1.1 (A:) Inorgani 75.4 0.91 6.6E-05 43.8 3.9 55 186-257 69-125 (302)
12 d1gsoa2 c.30.1.1 (A:-2-103) Gl 74.0 1.9 0.00014 35.2 5.0 93 95-222 3-95 (105)
13 d2d6fa2 c.88.1.1 (A:84-435) Gl 68.2 4.3 0.00031 39.6 7.1 61 173-235 66-129 (352)
14 d1dbqa_ c.93.1.1 (A:) Purine r 67.1 29 0.0021 30.4 12.4 90 95-227 1-90 (282)
15 d2b8na1 c.118.1.1 (A:4-417) Pu 65.7 25 0.0018 34.8 12.5 177 95-287 78-333 (414)
16 d1s1ma1 c.23.16.1 (A:287-544) 61.5 2.2 0.00016 40.2 3.2 60 187-264 56-117 (258)
17 d1oj7a_ e.22.1.2 (A:) Hypothet 61.5 5.7 0.00041 38.9 6.6 54 173-226 73-142 (390)
18 d1jkxa_ c.65.1.1 (A:) Glycinam 56.9 12 0.00087 33.3 7.5 87 95-197 1-88 (209)
19 d8abpa_ c.93.1.1 (A:) L-arabin 50.3 81 0.0059 27.7 16.9 92 95-229 2-93 (305)
20 d1vcoa1 c.23.16.1 (A:298-547) 47.4 2.9 0.00021 39.2 1.4 60 187-264 57-118 (250)
21 d1meoa_ c.65.1.1 (A:) Glycinam 43.3 28 0.0021 30.6 7.6 88 96-199 2-90 (205)
22 d1ujna_ e.22.1.1 (A:) Dehydroq 41.8 17 0.0013 34.7 6.3 114 172-323 65-181 (347)
23 d1jyea_ c.93.1.1 (A:) Lac-repr 41.2 46 0.0034 29.4 9.0 86 96-223 2-87 (271)
24 d1o7ja_ c.88.1.1 (A:) Asparagi 38.2 32 0.0023 32.5 7.6 61 173-235 64-128 (325)
25 d4pgaa_ c.88.1.1 (A:) Glutamin 37.9 32 0.0024 32.6 7.6 61 173-235 64-128 (330)
26 d1vdra_ c.71.1.1 (A:) Dihydrof 37.2 10 0.00076 32.2 3.4 54 176-236 80-133 (157)
27 d1weka_ c.129.1.1 (A:) Hypothe 36.0 51 0.0037 29.1 8.2 68 162-235 37-107 (208)
28 d2a84a1 c.26.1.4 (A:3-288) Pan 35.7 21 0.0015 33.6 5.6 40 256-295 21-62 (286)
29 d1byka_ c.93.1.1 (A:) Trehalos 35.1 97 0.0071 26.7 10.2 68 95-200 3-70 (255)
30 d1nhpa2 c.3.1.5 (A:120-242) NA 33.8 26 0.0019 27.9 5.3 50 171-223 12-61 (123)
31 d1wsaa_ c.88.1.1 (A:) Asparagi 32.3 24 0.0017 33.6 5.5 61 173-235 62-126 (328)
32 d1sg6a_ e.22.1.1 (A:) Dehydroq 31.4 36 0.0026 32.9 6.8 111 172-320 81-196 (389)
33 d1nnsa_ c.88.1.1 (A:) Asparagi 30.6 1.6E+02 0.011 27.4 11.3 61 173-235 62-124 (326)
34 d1kq3a_ e.22.1.2 (A:) Glycerol 29.9 20 0.0014 34.0 4.4 51 174-230 70-120 (364)
35 d1xmpa_ c.23.8.1 (A:) N5-CAIR 29.3 34 0.0025 29.2 5.4 10 216-225 78-87 (155)
36 d1uf3a_ d.159.1.6 (A:) Hypothe 29.3 47 0.0034 27.7 6.5 51 173-225 17-71 (228)
37 d1weha_ c.129.1.1 (A:) Hypothe 26.5 1.2E+02 0.0089 25.5 8.8 58 163-226 6-66 (171)
38 d1agxa_ c.88.1.1 (A:) Glutamin 26.3 58 0.0042 30.6 7.2 61 173-235 63-127 (331)
39 d1tjya_ c.93.1.1 (A:) AI-2 rec 25.8 1.9E+02 0.014 24.7 12.2 96 94-230 3-98 (316)
40 d1ve1a1 c.79.1.1 (A:1-302) O-a 25.6 49 0.0036 30.1 6.4 45 180-226 156-202 (302)
41 d1vp8a_ c.49.1.2 (A:) Hypothet 25.6 47 0.0034 29.2 5.6 48 172-225 16-63 (190)
42 d1o6da_ c.116.1.3 (A:) Hypothe 25.2 84 0.0061 25.8 7.3 92 95-202 1-106 (147)
43 d1m6ia2 c.3.1.5 (A:264-400) Ap 24.8 64 0.0046 25.8 6.3 49 171-221 21-70 (137)
44 d1ihoa_ c.26.1.4 (A:) Pantothe 24.6 33 0.0024 32.0 4.8 42 255-296 12-54 (282)
45 d1qopa_ c.1.2.4 (A:) Trp synth 24.3 62 0.0045 29.7 6.7 50 176-225 3-54 (267)
46 d1ig3a2 c.100.1.1 (A:10-178) T 23.5 63 0.0046 27.7 6.2 114 95-223 28-167 (169)
47 d1iv0a_ c.55.3.8 (A:) Hypothet 23.2 31 0.0023 26.9 3.7 30 203-232 39-68 (98)
48 d1b5ta_ c.1.23.1 (A:) Methylen 22.6 36 0.0026 31.3 4.6 32 166-199 70-101 (275)
49 d1v93a_ c.1.23.1 (A:) Methylen 22.5 35 0.0025 31.6 4.5 76 115-199 33-110 (292)
50 d7reqb2 c.23.6.1 (B:476-638) M 22.5 54 0.0039 27.8 5.5 40 180-219 78-118 (163)
51 d2fvya1 c.93.1.1 (A:2-306) Gal 22.0 2.2E+02 0.016 24.2 12.0 92 95-227 2-93 (305)
52 d1f0ka_ c.87.1.2 (A:) Peptidog 20.8 62 0.0045 28.8 5.9 101 95-203 1-105 (351)
53 d2yvta1 d.159.1.6 (A:4-260) Un 20.7 96 0.007 25.9 7.0 24 175-198 16-39 (257)
54 d1nksa_ c.37.1.1 (A:) Adenylat 20.3 1.1E+02 0.0081 24.3 7.1 35 192-226 4-40 (194)
No 1
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=100.00 E-value=3.9e-146 Score=1200.77 Aligned_cols=534 Identities=47% Similarity=0.825 Sum_probs=512.7
Q ss_pred CHhhhhhhcCCCCCcccccCC---ceeecCCCCCCCCChhHHHhhCCcccCCCeEEEecCCCCccCCCCCcEEEEEeCCC
Q 008424 28 SELQTSRIDHALPLPSVLKNP---FKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLVPNGADAVRSDEKLKIGVVLSGG 104 (566)
Q Consensus 28 s~~~~~r~~~~p~lp~~l~~~---~~~~~~~~~~~~~~~~~i~~~fp~~~~~~~~~~~~~~~~~~~~~~~~~IgIv~sGG 104 (566)
|+||++|++|+|+||++|++. ++..+++++.+..|+++|+++|||||++|.++|.+++ +.....+++|||||+|||
T Consensus 1 s~~q~~r~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~-~~~~~~~~~rIgIl~sGG 79 (550)
T d2f48a1 1 SLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGE-SSLSFSKALNIGIILSGG 79 (550)
T ss_dssp CHHHHHHTTCCCCCCGGGGSCGGGEEEEECCCCCCSSCHHHHHHHTTTTTTCCCEEEEESC-CCCSCCSCCEEEEEEBSS
T ss_pred CHhHHHHHhCCCCCChhHhCccceeeeccCCcccccCCHHHHHHHhHHhcCCceeeeccCC-CCCCcCCCCEEEEECcCC
Confidence 899999999999999999865 5678899999999999999999999999999999885 334556789999999999
Q ss_pred CCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCHHHHHHHHHHH
Q 008424 105 QAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETPEQFKQATETA 184 (566)
Q Consensus 105 ~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~e~~~~~~~~l 184 (566)
||||+||||+|+++++++.+++++||||++||+||+++++++|+++.++.|+|+|||++++|+|+++++++++++++++|
T Consensus 80 ~aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~~L~~~~v~~~~~~GG~~l~~s~r~~~~~~e~~~~i~~~l 159 (550)
T d2f48a1 80 PAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFVA 159 (550)
T ss_dssp CCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCCSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhCCCCEEEEECcchHHhcCCCEEECCHHHHhhHHhCCCcEecCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred HHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhcC
Q 008424 185 VKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTG 264 (566)
Q Consensus 185 ~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~I~ni~~Da~S~~ 264 (566)
++++||+||+||||||+++|++|+|||++++++|+||||||||||||+++++|+|||||||+++++++|+||++||.|++
T Consensus 160 ~~~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~d~s~GfdTA~~~~~~~i~~l~~da~S~~ 239 (550)
T d2f48a1 160 KENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTK 239 (550)
T ss_dssp HHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCEEEEECChHHHHHHHHHHHHHHHhCCCccEEEecccccCCCCCccccccccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred CeeEEEEEcCCCCchHHHHhhhhcCCcEEEeCCchhhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCchHHH
Q 008424 265 KYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYIVDIICKRAELGYNYGVILIPEGLIDFIPEVQ 344 (566)
Q Consensus 265 k~~~fVevMGR~ag~LALe~aLqt~pnivlIpEe~~~~~~tL~~v~~~i~~~I~~R~~~gk~~gvVlIpEGl~e~ipe~~ 344 (566)
++|||||||||+||||||+||||||||+|||||+++.++++|.+|+++|++.|++|+..|++|||||||||+++|+||++
T Consensus 240 ~~~~~VevMGR~aG~lAl~~alat~a~~ilipE~~~~~~~~L~~i~~~i~~~I~kR~~~gk~~gvIvV~EGli~~ipe~~ 319 (550)
T d2f48a1 240 KYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEVK 319 (550)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSHHHH
T ss_pred cceEEEEEecCCCcHHHHHHHHhcCCceEEecccccchhhhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcccccchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccc--------cCchhhhcchhhHHHhhhchHHHHHHH---hhccCCCCCcccchhhhHHHHHHHH
Q 008424 345 QLIAELNEILAHEVVDE--------GGQWKKKLTKQSLQLFEFLPQAIQEQL---MLERDPHGNVQVAKIETEKMLIQMV 413 (566)
Q Consensus 345 ~li~el~~~l~~~~~~~--------~g~~~~~ls~~~~~lf~~lp~~i~~ql---~~~rD~~G~~~ls~i~te~lL~~lV 413 (566)
.|++|+|+++.+...+. ...+..+|+++++++|.+||.+|++|| +++||+|||+||++|+||++|+++|
T Consensus 320 ~Li~el~~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~~~l~~~lp~~i~~qll~~~~~rD~~G~~~ls~I~~e~lLa~~V 399 (550)
T d2f48a1 320 SLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEMI 399 (550)
T ss_dssp HHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHHHHH
T ss_pred HHHHHHHHhhhhcccccccccchhhhhhhhhhcchhhhhhhhcccHHHHHHHhhcccccCCCCCeeeccccHHHHHHHHH
Confidence 99999999987654321 123788999999999999999999999 5689999999999999999999999
Q ss_pred HHHHHhhhccCCccccccccccccCccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCCCCccceEEeccch
Q 008424 414 ETELENRKQEGVNKGQFKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTAL 493 (566)
Q Consensus 414 ~~~L~~r~~~~~y~~~f~~~~~~lGy~~R~~~PS~fD~~~a~~LG~~Av~li~~g~tG~mv~i~nl~~~~~~w~~~~vPl 493 (566)
+++|++++..+.|+++|++++|+|||+|||+.||+||+.|||+||+.|++++++|+||||++|+|++.++++|+++++||
T Consensus 400 ~~~L~~~~~~~~~~~~f~~~~h~~GYe~R~a~PS~fD~~~a~~lG~~Av~~~~~G~tG~M~~I~~l~~~~~~w~~~~iPl 479 (550)
T d2f48a1 400 QSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPL 479 (550)
T ss_dssp HHHHHHHHTTTCCCSCCCEEEEEESHHHHTSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEEEEG
T ss_pred HHHHHHhhhhcccccceeeeecccccceeCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCCCCCceeEECCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhcCCCcceeeecccccCChhhHHHHHhhhcccccCcccCCccccccCCCC--CCCcceeeecc
Q 008424 494 TALMDVERRHGKFKPVIKKAMVELDGAPFKKFVSMRDEWALNNRYISPGPIQFTGPTS--GDVNHTLLLEL 562 (566)
Q Consensus 494 ~~~~~~e~~~g~~~p~i~~~~V~l~g~~f~~~~~~r~~w~~~d~y~~pGpiq~~g~~~--~~~~~tl~~e~ 562 (566)
++|||+|+|+|+.+|+|+|++|||+|++|++|+++|++|+++|+||+||||||+||.+ |++|+||.||.
T Consensus 480 ~~~m~~e~r~g~~~~~i~k~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~~~tl~~e~ 550 (550)
T d2f48a1 480 TMLMNMEERYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLEL 550 (550)
T ss_dssp GGGEEEEEETTEEEEEECCCCCCTTSHHHHHHHHHHHHHHHSCCCCCCCCCCCSSCHHHHTCCCHHHHHHT
T ss_pred HHHhhHHHhcCCcCcceecceeCCCcHHHHHHHHHHHHHHhcCcCcCCCCcccCCchhhcccccchhcccC
Confidence 9999999999999999999999999999999999999999999999999999999987 99999999984
No 2
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=1.2e-73 Score=591.43 Aligned_cols=301 Identities=27% Similarity=0.369 Sum_probs=268.6
Q ss_pred CcEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCC-C
Q 008424 94 KLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKI-E 172 (566)
Q Consensus 94 ~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~-~ 172 (566)
.||||||+|||||||+|++|+|+++++.. .+++||||++||+||+++++++|++++++.|+++||+ +|||+|++. .
T Consensus 1 mkrIaIl~sGG~~pgiNa~i~~~v~~~~~--~~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt-~lgs~r~~~~~ 77 (319)
T d4pfka_ 1 MKRIGVLTSGGDSPGMNAAIRSVVRKAIY--HGVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGT-ILYTARCPEFK 77 (319)
T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHHH--TTCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSC-TTCCCCCTTSS
T ss_pred CCEEEEECcCCCcHHHHHHHHHHHHHHHH--CCCEEEEEccchHHhcCCCcccCCHHHHHHHHhcCcc-ccccCCCCccc
Confidence 37999999999999999999999999754 5789999999999999999999999999999999998 999999864 5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHH
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEM 252 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~ 252 (566)
+++++++++++|++++||+||+||||||+++|++|+|+ .++||||||||||||+++| +|||||||+++++++
T Consensus 78 ~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td--~t~Gf~TA~~~~~~~ 149 (319)
T d4pfka_ 78 TEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTD--FTIGFDTALNTVIDA 149 (319)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCS--SCBTHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHhccceEEEecCchHHHHHHHHHhc------cCceeeeeeeccCCcCCcc--ccccHHHHHHHHHHH
Confidence 78899999999999999999999999999999999885 5789999999999999888 899999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEEcCCCCchHHHHhhhhcCCcEEEeCCchhhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEE
Q 008424 253 IGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYIVDIICKRAELGYNYGVILI 332 (566)
Q Consensus 253 I~ni~~Da~S~~k~~~fVevMGR~ag~LALe~aLqt~pnivlIpEe~~~~~~tL~~v~~~i~~~I~~R~~~gk~~gvVlI 332 (566)
|++++.+|.|++ +|||||+|||+|||||++|||+++||+|||||+++. + +.+++.|++|.+++++|++|+|
T Consensus 150 i~~l~~~a~s~~-rv~ivEvMGR~aG~lA~~~~la~~a~~iliPE~~~~----~----~~~~~~i~~~~~~~k~~~ivvv 220 (319)
T d4pfka_ 150 IDKIRDTATSHE-RTYVIEVMGRHAGDIALWSGLAGGAETILIPEADYD----M----NDVIARLKRGHERGKKHSIIIV 220 (319)
T ss_dssp HHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTTCSEEECTTSCCC----H----HHHHHHHHHHHHTTCSCEEEEE
T ss_pred HHHHHhhcccCc-ceEEEEecCCCCcHHHHHhhccCCCcEEEecCCCCC----H----HHHHHHHHHHHhhcCCeeEEEE
Confidence 999998888776 589999999999999999999999999999999863 3 4556677888889999999999
Q ss_pred eCCCCCCchHHHHHHHHHHHHhhhccccccCchhhhcchhhHHHhhhchHHHHHHHhhccCCCCCcccchhhhHHHHHHH
Q 008424 333 PEGLIDFIPEVQQLIAELNEILAHEVVDEGGQWKKKLTKQSLQLFEFLPQAIQEQLMLERDPHGNVQVAKIETEKMLIQM 412 (566)
Q Consensus 333 pEGl~e~ipe~~~li~el~~~l~~~~~~~~g~~~~~ls~~~~~lf~~lp~~i~~ql~~~rD~~G~~~ls~i~te~lL~~l 412 (566)
+||+.... .+++.
T Consensus 221 sEG~~~~~-------------------------------------------------------------------~~~~~ 233 (319)
T d4pfka_ 221 AEGVGSGV-------------------------------------------------------------------DFGRQ 233 (319)
T ss_dssp ETTTCCHH-------------------------------------------------------------------HHHHH
T ss_pred ecccchhh-------------------------------------------------------------------hhhhh
Confidence 99986310 01222
Q ss_pred HHHHHHhhhccCCccccccccccccCccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCCCCccceEEeccc
Q 008424 413 VETELENRKQEGVNKGQFKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTA 492 (566)
Q Consensus 413 V~~~L~~r~~~~~y~~~f~~~~~~lGy~~R~~~PS~fD~~~a~~LG~~Av~li~~g~tG~mv~i~nl~~~~~~w~~~~vP 492 (566)
+++++ .+++|...+||.|||+.||+||+.+|+.||..|++++.+|.||+|++++|. +...+|
T Consensus 234 i~~~~-----------g~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g~sg~mv~i~~~-------~~~~vp 295 (319)
T d4pfka_ 234 IQEAT-----------GFETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNN-------QLVDHD 295 (319)
T ss_dssp HHHHH-----------CCCEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEETT-------EEEEEE
T ss_pred hhhhc-----------CceeEEeecCchhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEEEEECC-------EEEEEc
Confidence 33332 356788999999999999999999999999999999999999999999987 467799
Q ss_pred hHHHHhH
Q 008424 493 LTALMDV 499 (566)
Q Consensus 493 l~~~~~~ 499 (566)
|.++++.
T Consensus 296 l~~v~~~ 302 (319)
T d4pfka_ 296 IAEALAN 302 (319)
T ss_dssp HHHHTTS
T ss_pred HHHHHhc
Confidence 9998753
No 3
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.4e-73 Score=587.33 Aligned_cols=300 Identities=27% Similarity=0.339 Sum_probs=266.9
Q ss_pred CcEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCC-CC
Q 008424 94 KLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDK-IE 172 (566)
Q Consensus 94 ~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k-~~ 172 (566)
.+|||||+|||||||+|++|+|+++++. +++.+||||++||+||+++++++|+++.++.++++||+ +|||+|++ +.
T Consensus 2 mkrIgIltsGG~~pg~Na~i~~~v~~~~--~~~~~v~g~~~G~~Gl~~~~~~~l~~~~v~~~~~~gGs-~lgt~R~~~~~ 78 (320)
T d1pfka_ 2 IKKIGVLTSGGDAPGMNAAIRGVVRSAL--TEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGT-FLGSARFPEFR 78 (320)
T ss_dssp CCEEEEEECSSCCTTHHHHHHHHHHHHH--HTTCEEEEESTHHHHHHTTCEEEECSGGGTTCTTCCSC-TTCCCCCGGGG
T ss_pred CceEEEEccCCCchHHHHHHHHHHHHHH--HCCCEEEEEeccHHHHcCCCeEeCCHHHHHHHHhcCCC-cccccCCCCCc
Confidence 3799999999999999999999999864 46789999999999999999999999999999999998 99999986 56
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHH
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEM 252 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~ 252 (566)
+++++++++++|++++||+||+||||||+++|+.|+|+ .++|||||||||||++++| +|||||||+++++++
T Consensus 79 ~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~l~~~------~~~vigiPkTIDNDl~~td--~s~Gf~TA~~~~~~~ 150 (320)
T d1pfka_ 79 DENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEM------GFPCIGLPGTIDNDIKGTD--YTIGFFTALSTVVEA 150 (320)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCTTCCCTTCS--CCBTHHHHHHHHHHH
T ss_pred chhhhhhHHHHHHHcCCCEEEEeCCchHHHHHHHHHhc------ccceeeeeeeecCCCCCcC--CCCchHHHHHHHHHH
Confidence 78899999999999999999999999999999999886 5789999999999999887 899999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEEcCCCCchHHHHhhhhcCCcEEEeCCchhhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEE
Q 008424 253 IGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYIVDIICKRAELGYNYGVILI 332 (566)
Q Consensus 253 I~ni~~Da~S~~k~~~fVevMGR~ag~LALe~aLqt~pnivlIpEe~~~~~~tL~~v~~~i~~~I~~R~~~gk~~gvVlI 332 (566)
++++..++.|++ +|||||+|||+|||||++|||+++||++||||.++ +++ .+++.++++..++++|++|++
T Consensus 151 i~~l~~~a~s~~-rv~ivEvMGR~~G~la~~~ala~~a~~iliPE~~~----~~~----~~~~~i~~~~~~~~~~~iivv 221 (320)
T d1pfka_ 151 IDRLRDTSSSHQ-RISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEF----SRE----DLVNEIKAGIAKGKKHAIVAI 221 (320)
T ss_dssp HHHHHHHHHHHT-CEEEEEECCTTCCHHHHHHHHHTTCSEEECTTSCC----CHH----HHHHHHHHHHHTTCSCEEEEE
T ss_pred HHHHhhhccCCC-cEEEEEeeccchhHHHHHhhhccCCceEecCCCCC----CHH----HHHHHHHHHHhcCCCcceEEe
Confidence 999998887765 68999999999999999999999999999999985 333 345566777788999999999
Q ss_pred eCCCCCCchHHHHHHHHHHHHhhhccccccCchhhhcchhhHHHhhhchHHHHHHHhhccCCCCCcccchhhhHHHHHHH
Q 008424 333 PEGLIDFIPEVQQLIAELNEILAHEVVDEGGQWKKKLTKQSLQLFEFLPQAIQEQLMLERDPHGNVQVAKIETEKMLIQM 412 (566)
Q Consensus 333 pEGl~e~ipe~~~li~el~~~l~~~~~~~~g~~~~~ls~~~~~lf~~lp~~i~~ql~~~rD~~G~~~ls~i~te~lL~~l 412 (566)
+||+... .-+++.
T Consensus 222 sEg~~~~-------------------------------------------------------------------~~~~~~ 234 (320)
T d1pfka_ 222 TEHMCDV-------------------------------------------------------------------DELAHF 234 (320)
T ss_dssp ESSSSCH-------------------------------------------------------------------HHHHHH
T ss_pred ecccccc-------------------------------------------------------------------hhHHHH
Confidence 9998531 012333
Q ss_pred HHHHHHhhhccCCccccccccccccCccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCCCCccceEEeccc
Q 008424 413 VETELENRKQEGVNKGQFKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTA 492 (566)
Q Consensus 413 V~~~L~~r~~~~~y~~~f~~~~~~lGy~~R~~~PS~fD~~~a~~LG~~Av~li~~g~tG~mv~i~nl~~~~~~w~~~~vP 492 (566)
+++++ ..++|+..|||.|||+.||+||+.+|++||..|++++++|++|+|++++|. +...+|
T Consensus 235 i~~~~-----------g~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~G~~g~mvg~~~~-------~~~~~p 296 (320)
T d1pfka_ 235 IEKET-----------GRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNE-------QLVHHD 296 (320)
T ss_dssp HHHHH-----------SSCEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETT-------EEEEEE
T ss_pred HHHHh-----------CcceeecccchhhcCCCCCHHHHHHHHHHHHHHHHHHHCCCCCeEEEEECC-------EEEEec
Confidence 44443 246788999999999999999999999999999999999999999999987 477799
Q ss_pred hHHHHh
Q 008424 493 LTALMD 498 (566)
Q Consensus 493 l~~~~~ 498 (566)
|.+++.
T Consensus 297 l~~~v~ 302 (320)
T d1pfka_ 297 IIDAIE 302 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998754
No 4
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=81.37 E-value=0.27 Score=46.45 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=24.2
Q ss_pred CCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeec
Q 008424 188 DLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPK 225 (566)
Q Consensus 188 ~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPK 225 (566)
+.|.+|+||||||+-.|... +. . .++|+||-.
T Consensus 39 ~~D~vi~iGGDGT~L~a~~~---~~--~-~~PilGIn~ 70 (249)
T d1z0sa1 39 NFDFIVSVGGDGTILRILQK---LK--R-CPPIFGINT 70 (249)
T ss_dssp GSSEEEEEECHHHHHHHHTT---CS--S-CCCEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHH---hc--C-CCcEEEECc
Confidence 57889999999999887542 11 2 468999984
No 5
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=80.18 E-value=1.4 Score=43.40 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhc---------------CCCceEEEeeccccCCCC
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSK---------------NLKTLVMGCPKTIDGDLK 232 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~---------------~~~i~VIGVPKTIDNDL~ 232 (566)
+.++.+++++.+++.+.|.+|-|||--+++.|..++-..... .-.+++|.||-|--++-.
T Consensus 72 ~~~~v~~~~~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse 146 (385)
T d1rrma_ 72 TITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAE 146 (385)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTT
T ss_pred CHHHHHHHhhhhhccCCCEEEecCCCchhhHHHHHHHHhcCCccchhhhhhccccccCCCCceEecccccccccc
Confidence 568899999999999999999999999999999888554321 224789999987666554
No 6
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=79.03 E-value=1.8 Score=42.08 Aligned_cols=54 Identities=15% Similarity=0.262 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCC
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDL 231 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL 231 (566)
+.+..+++.+.+++.+.|.+|-+||--+++.|..+|... ++++|.||-|--.+-
T Consensus 70 ~~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~iA~~~-----~~p~i~IPTT~gtgs 123 (366)
T d1jq5a_ 70 SRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADEL-----DAYIVIVPTAASTDA 123 (366)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHH-----TCEEEEEESSCCSSC
T ss_pred CHHHHHHHHHHhhccCCcEEEEecCCccccchheeeecc-----cceeeehhhhhhhhh
Confidence 457789999999999999999999999999999888542 578999998854443
No 7
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=77.59 E-value=0.91 Score=43.07 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHH
Q 008424 176 QFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDT 244 (566)
Q Consensus 176 ~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdT 244 (566)
+..+.++.+...+.|.+|++|||||...+.. .+.+.+.++++.-+|.==-||+. .++|..+
T Consensus 46 ~~~~~~~~~~~~~~d~ivv~GGDGTv~~v~~---~l~~~~~~~~l~iiP~GTgN~~a-----r~l~~~~ 106 (312)
T d2qv7a1 46 DATLEAERAMHENYDVLIAAGGDGTLNEVVN---GIAEKPNRPKLGVIPMGTVNDFG-----RALHIPN 106 (312)
T ss_dssp HHHHHHHHHTTTTCSEEEEEECHHHHHHHHH---HHTTCSSCCEEEEEECSSCCHHH-----HHTTCCS
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCcHHHHHHH---HHHhhccccceEEeecCCCCcch-----hhccccc
Confidence 4555666666788999999999999776542 33344556788889998889987 4666644
No 8
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=76.96 E-value=1.8 Score=40.56 Aligned_cols=87 Identities=14% Similarity=0.149 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeCCchhHHHHH-HHHHHHhhcCCC-ceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHHH
Q 008424 176 QFKQATETAVKLDLDGLVVIGGDDSNTNAC-LLAEHFRSKNLK-TLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMI 253 (566)
Q Consensus 176 ~~~~~~~~l~~l~Id~LviIGGddS~t~A~-~Lae~~~~~~~~-i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~I 253 (566)
+..++++.+.+.+.|.+|++|||||...+. .|.+ ..+.. ..+.-+|.==-||+. .++|..+..+. ++
T Consensus 41 ~a~~~~~~~~~~~~d~Ivv~GGDGTv~ev~~gl~~---~~~~~~p~lgilP~GTgN~~A-----r~lg~~~~~~~---a~ 109 (295)
T d2bona1 41 DAARYVEEARKFGVATVIAGGGDGTINEVSTALIQ---CEGDDIPALGILPLGTANDFA-----TSVGIPEALDK---AL 109 (295)
T ss_dssp HHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHH---CCSSCCCEEEEEECSSSCHHH-----HHTTCCSSHHH---HH
T ss_pred hHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHh---ccCCCCceEEEEECCcccchH-----HHcCCCcchhh---hh
Confidence 456677777778999999999999976543 3432 22222 234456987788886 46666443332 23
Q ss_pred HHHHHHHhhcCCeeEEEEEcCCC
Q 008424 254 GNVMIDARSTGKYYHFVRLMGRA 276 (566)
Q Consensus 254 ~ni~~Da~S~~k~~~fVevMGR~ 276 (566)
..+. ....+.+.+.++-||.
T Consensus 110 ~~i~---~g~~~~id~~~v~~~~ 129 (295)
T d2bona1 110 KLAI---AGDAIAIDMAQVNKQT 129 (295)
T ss_dssp HHHH---HSEEEEEEEEEETTSC
T ss_pred hhhc---ccceEEeeeeeeecce
Confidence 3332 1233456677776653
No 9
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=76.87 E-value=1.8 Score=42.81 Aligned_cols=58 Identities=14% Similarity=0.111 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhc-------------CCCceEEEeeccccCC
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSK-------------NLKTLVMGCPKTIDGD 230 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~-------------~~~i~VIGVPKTIDND 230 (566)
+.++.+++++.+++.+.|.+|-|||--+++.|..++..+... ...+++|.||-|--++
T Consensus 77 t~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtg 147 (398)
T d1vlja_ 77 VLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATG 147 (398)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSC
T ss_pred CHHHHHHHhhhcccccCceEEecCCcchhhHHHHHHHHhhcccchHHhhcccccccCCCCeeeeecccccc
Confidence 468899999999999999999999999999999888654321 2357899999665444
No 10
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=75.50 E-value=1.9 Score=42.07 Aligned_cols=60 Identities=20% Similarity=0.139 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhc-------------CCCceEEEeeccccCCCC
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSK-------------NLKTLVMGCPKTIDGDLK 232 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~-------------~~~i~VIGVPKTIDNDL~ 232 (566)
+.++.+++++.+++.+.|.+|-|||--+++.|..++-.+... ...+++|.||-|--.+-.
T Consensus 71 ~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse 143 (359)
T d1o2da_ 71 SFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSE 143 (359)
T ss_dssp BHHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGG
T ss_pred CHHHHHHhhhhccccCCceEEecccccchhHHHHHHHHHhCCCCchhhccCcccccCCCCeEEeccccccchh
Confidence 468899999999999999999999999999999887544211 235789999988655543
No 11
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=75.42 E-value=0.91 Score=43.81 Aligned_cols=55 Identities=22% Similarity=0.321 Sum_probs=36.4
Q ss_pred HcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHH--HHHHHHHHH
Q 008424 186 KLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKI--YAEMIGNVM 257 (566)
Q Consensus 186 ~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~--~se~I~ni~ 257 (566)
.-++|.+|++|||||+-.|+..... .+++|+||-. -++||-|.... +.+++..+.
T Consensus 69 ~~~~Dlvi~lGGDGT~L~a~~~~~~-----~~~PilGin~------------G~lGFL~~~~~~~~~~~l~~~~ 125 (302)
T d1u0ta_ 69 ADGCELVLVLGGDGTFLRAAELARN-----ASIPVLGVNL------------GRIGFLAEAEAEAIDAVLEHVV 125 (302)
T ss_dssp ---CCCEEEEECHHHHHHHHHHHHH-----HTCCEEEEEC------------SSCCSSCSEEGGGHHHHHHHHH
T ss_pred cccccEEEEEcCChHHHHHHHHhhc-----cCCeEEEeCC------------CccceecccchhHHHHHHHHHH
Confidence 3578999999999998777655422 2589999963 37888877654 344444443
No 12
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=74.04 E-value=1.9 Score=35.16 Aligned_cols=93 Identities=16% Similarity=0.212 Sum_probs=59.4
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCH
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETP 174 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~ 174 (566)
+||.||=|||- =|+..+.+. +.....++|-+- |-.|.- +...+.....+.
T Consensus 3 MkVLvIGsGgR---EhAia~~L~----~s~~~~~l~~~p-gn~g~~----------------------~~~~~~~~~~~~ 52 (105)
T d1gsoa2 3 MKVLVIGNGGR---EHALAWKAA----QSPLVETVFVAP-GNAGTA----------------------LEPALQNVAIGV 52 (105)
T ss_dssp EEEEEEECSHH---HHHHHHHHT----TCTTEEEEEEEE-CCHHHH----------------------HSTTEEECCCCT
T ss_pred CEEEEECCCHH---HHHHHHHHh----cCCCccEEEEec-CCCccc----------------------hhhhhccccccc
Confidence 68999988853 455555443 444456777543 444422 111111111133
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEE
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMG 222 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIG 222 (566)
.+++.+++.+++++|| |||||=..-+ +.=|+++|+++| ++|+|
T Consensus 53 ~d~~~i~~~a~~~~id-lvviGPE~pL--~~Gl~D~l~~~g--I~vfG 95 (105)
T d1gsoa2 53 TDIPALLDFAQNEKID-LTIVGPEAPL--VKGVVDTFRAAG--LKIFG 95 (105)
T ss_dssp TCHHHHHHHHHHTTCS-EEEECSHHHH--HTTHHHHHHHTT--CCEES
T ss_pred CcHHHHHHHHHHhCcC-EEEECcHHHH--HhHHHHHHHHCC--CEEEC
Confidence 4688999999999999 8899988886 445888888876 45765
No 13
>d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=68.22 E-value=4.3 Score=39.58 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHH---cCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCC
Q 008424 173 TPEQFKQATETAVK---LDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKE 235 (566)
Q Consensus 173 ~~e~~~~~~~~l~~---l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ 235 (566)
+++++.++.+.+++ -+.|++||+-|-|||.-.+.+-..+.+.. .+||-.=.-+--|-.++|
T Consensus 66 ~~~~w~~la~~i~~~~~~~~dG~VVtHGTDTl~~TA~~Ls~~l~~~--kPVVlTGa~rp~~~~~sD 129 (352)
T d2d6fa2 66 KPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFMLRTP--VPVVFTGAQRSSDRPSSD 129 (352)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHHHHHHEECS--SCEEEECCSSCTTSTTCT
T ss_pred CHHHHHHHHHHHHHhccccCCeEEEecCchhHHHHHHHHHHHhccC--CCEEEecccccccCcCcc
Confidence 56777776666543 37999999999999987665555655543 456655444444444445
No 14
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=67.06 E-value=29 Score=30.44 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=61.5
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCH
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETP 174 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~ 174 (566)
|+||||+..-..|=...++.|+-+.+++. +.++.-+ .+. .+.
T Consensus 1 ktIg~i~~~~~~pf~~~~~~gi~~~~~~~--gy~~~~~---------------------------------~~~---~d~ 42 (282)
T d1dbqa_ 1 KSIGLLATSSEAAYFAEIIEAVEKNCFQK--GYTLILG---------------------------------NAW---NNL 42 (282)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHH--TCEEEEE---------------------------------ECT---TCH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEEEE---------------------------------eCC---CCH
Confidence 58999999999999999999999988664 3343211 111 134
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccc
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTI 227 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTI 227 (566)
+...+.++.+...++|++|+.+.+.+-.....+.+ .. +++||.+-...
T Consensus 43 ~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~---~~--~iPvV~~~~~~ 90 (282)
T d1dbqa_ 43 EKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEE---YR--HIPMVVMDWGE 90 (282)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHH---TT--TSCEEEEECSS
T ss_pred HHHHHHHHHHHhcCCCEEeeecccccchhhhhHHh---hc--CCCceEEEecc
Confidence 56678899999999999999987766433322222 22 46777665443
No 15
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Probab=65.67 E-value=25 Score=34.77 Aligned_cols=177 Identities=15% Similarity=0.257 Sum_probs=105.0
Q ss_pred cEEEEEeCCCCCchhhHHHHH--HHHHHHhhCCCCEEEEEc-cChhhhcCCCEEecCccc-----------------ccc
Q 008424 95 LKIGVVLSGGQAPGGHNVISG--IYDYLQDRAKGSVLYGFR-GGPAGIMKCKYVELTSNY-----------------IYP 154 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~g--l~~~l~~~~~~~~v~Gf~-~G~~GLl~~~~~eLt~~~-----------------v~~ 154 (566)
.+|=|+.+|.|.|.-+++.++ +.+.+++..++..|+..+ +|-.-|+.-=.-.+|-++ +..
T Consensus 78 ~~i~v~~a~HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~ 157 (414)
T d2b8na1 78 DDFEIYEAGHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSALLKSGASIEEINT 157 (414)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCCCeEEEEeeCCcccchhcCCCCCCHHHHHHHHHHHHhCCCCHHHHHH
Confidence 467789999999999999865 777777777777666655 666677753221122111 111
Q ss_pred hhc-----cCC-----------------------ccccccCCCCCCCHHHHHHHHHHHHHcCCC----------------
Q 008424 155 YRN-----QGG-----------------------FDMICSGRDKIETPEQFKQATETAVKLDLD---------------- 190 (566)
Q Consensus 155 ~~n-----~GG-----------------------~~~LGSsR~k~~~~e~~~~~~~~l~~l~Id---------------- 190 (566)
.|. .|| -++|+|+-+-+ ++..++.+++.++++++.
T Consensus 158 VRk~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvp-d~~t~~da~~il~~y~l~~p~~v~~~l~~~~~~~ 236 (414)
T d2b8na1 158 VRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWP-DSSTSEDALKVLEKYGIETSESVKRAILQETPKH 236 (414)
T ss_dssp HHHTTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSC-CCCCHHHHHHHHHHTTCCCCHHHHHHHTSCCCSC
T ss_pred HHHHHHhccccHHHHHhccCceEEEEEecCCCCCchheecCCcCC-CCCCHHHHHHHHHHcCCCCChHHHHhhcccCCcc
Confidence 111 122 12567776654 234577788888888653
Q ss_pred ----EEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhcCCe
Q 008424 191 ----GLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTGKY 266 (566)
Q Consensus 191 ----~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~I~ni~~Da~S~~k~ 266 (566)
...+||.+...-.| .++++++.|++ ++-+..++++|.. + +.+.+++++.++...-....+-
T Consensus 237 ~~~v~~~ii~~n~~al~a--a~~~a~~~G~~--~~~~~~~l~Gea~--~---------va~~~a~~~~~~~~~~~~~~~p 301 (414)
T d2b8na1 237 LSNVEIHLIGNVQKVCDE--AKSLAKEKGFN--AEIITTSLDCEAR--E---------AGRFIASIMKEVKFKDRPLKKP 301 (414)
T ss_dssp CSSEEEEEEECHHHHHHH--HHHHHHHTTCE--EEEEEEEECSBHH--H---------HHHHHHHHHHHHHHHCCSSCSS
T ss_pred ccccceEEecCHHHHHHH--HHHHHHHcCCc--eEEecccccCcHH--H---------HHHHHHHHHHHHHhcCCCCCCC
Confidence 45678876654433 23555667875 4445667888865 3 5667777776665444333332
Q ss_pred eEEE---EE--------cCCCCchHHHHhhhh
Q 008424 267 YHFV---RL--------MGRAASHITLECALQ 287 (566)
Q Consensus 267 ~~fV---ev--------MGR~ag~LALe~aLq 287 (566)
..+| |+ -|...-++||.+|++
T Consensus 302 ~~li~GGEtTV~v~g~G~GGRNqElaL~~a~~ 333 (414)
T d2b8na1 302 AALIFGGETVVHVKGNGIGGRNQELALSAAIA 333 (414)
T ss_dssp EEEEEEECCBCCCCSCCCCCHHHHHHHHHHHH
T ss_pred eEEEEcceeEEEecCCCCCcccHHHHHHHHHH
Confidence 2222 22 333445788887775
No 16
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=61.52 E-value=2.2 Score=40.24 Aligned_cols=60 Identities=28% Similarity=0.325 Sum_probs=45.0
Q ss_pred cCCCEEEEeCCchh--HHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhcC
Q 008424 187 LDLDGLVVIGGDDS--NTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTG 264 (566)
Q Consensus 187 l~Id~LviIGGddS--~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~I~ni~~Da~S~~ 264 (566)
.++||++|-||.|. ..+.-..++|+++++ ++..| .|+||+.|+=.++.-+-.+ .||.|..
T Consensus 56 ~~~dGIlvPGGFG~RG~eGki~ai~yARen~--iPfLG---------------IClGmQ~avIE~ARnvlg~-~~A~S~E 117 (258)
T d1s1ma1 56 KGLDAILVPGGFGYRGVEGMITTARFARENN--IPYLG---------------ICLGMQVALIDYARHVANM-ENANSTE 117 (258)
T ss_dssp TTCSEEEECCCCSSTTHHHHHHHHHHHHHTT--CCEEE---------------ETHHHHHHHHHHHHHHHCC-TTCEETT
T ss_pred cccccEEeecccCcCCHHHHHHHHHHHHHcC--ccHHH---------------HHHHHHHHHHHHHHHhCCC-CCCcCCC
Confidence 47999999999886 444555568888776 56777 4999999998777665555 5888753
No 17
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=61.49 E-value=5.7 Score=38.88 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhh----------------cCCCceEEEeecc
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRS----------------KNLKTLVMGCPKT 226 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~----------------~~~~i~VIGVPKT 226 (566)
+.+..+++++.+++.+.|.+|-|||--+++.|..++-.... ..-.+++|.||-|
T Consensus 73 ~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTt 142 (390)
T d1oj7a_ 73 AYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTL 142 (390)
T ss_dssp BHHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESS
T ss_pred CHHHHHHHHHHHhhcCCCEEEecCCCccccHHHHHHHHhcCCcccchhhhhcccccccccCCCccccccc
Confidence 46789999999999999999999999999998877643210 1123679999955
No 18
>d1jkxa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Escherichia coli [TaxId: 562]}
Probab=56.94 E-value=12 Score=33.33 Aligned_cols=87 Identities=15% Similarity=0.103 Sum_probs=45.6
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCH
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETP 174 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~ 174 (566)
+||+|+.||+ | +.+..++++++..+-..++.++.- ++. +...++.....+....... ..+..+.
T Consensus 1 MkIaVl~SG~---G--SnL~aLl~a~~~~~l~~~I~~Vis------n~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~ 64 (209)
T d1jkxa_ 1 MNIVVLISGN---G--SNLQAIIDACKTNKIKGTVRAVFS------NKA----DAFGLERARQAGIATHTLI-ASAFDSR 64 (209)
T ss_dssp CEEEEEESSC---C--HHHHHHHHHHHTTSSSSEEEEEEE------SCT----TCHHHHHHHHTTCEEEECC-GGGCSSH
T ss_pred CEEEEEEecC---c--HHHHHHHHHHHcCCCCCEEEEEEe------CCC----Ccccchhhhccccceeeee-ccccccc
Confidence 5899999996 4 235567777655444567766541 000 0011122222222111111 1222233
Q ss_pred HH-HHHHHHHHHHcCCCEEEEeCC
Q 008424 175 EQ-FKQATETAVKLDLDGLVVIGG 197 (566)
Q Consensus 175 e~-~~~~~~~l~~l~Id~LviIGG 197 (566)
+. -+...+.++++++|.+|++|=
T Consensus 65 ~~~~~~~~~~l~~~~~Dliv~~g~ 88 (209)
T d1jkxa_ 65 EAYDRELIHEIDMYAPDVVVLAGF 88 (209)
T ss_dssp HHHHHHHHHHHGGGCCSEEEESSC
T ss_pred cchHHHHHHHHHhcCCCEEEEeee
Confidence 33 345678899999999888773
No 19
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=50.35 E-value=81 Score=27.73 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=61.9
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCH
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETP 174 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~ 174 (566)
+|||++..+..-|--.+++.|+-+.++.. |.+++. . ++ .+.
T Consensus 2 ~kIg~v~~~~~~p~~~~~~~g~~~aa~~~--G~~~i~--------------------------------~-~~----~d~ 42 (305)
T d8abpa_ 2 LKLGFLVKQPEEPWFQTEWKFADKAGKDL--GFEVIK--------------------------------I-AV----PDG 42 (305)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHH--TEEEEE--------------------------------E-EC----CSH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEEE--------------------------------E-cC----CCH
Confidence 69999999999999999999999987653 233221 0 00 023
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccC
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDG 229 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDN 229 (566)
++....++.+...++|++++..-+.+... .+.+.+.+.| ++||.+-..+++
T Consensus 43 ~~q~~~i~~li~~~vDgiIi~~~~~~~~~--~~~~~a~~~g--iPVV~~d~~~~~ 93 (305)
T d8abpa_ 43 EKTLNAIDSLAASGAKGFVICTPDPKLGS--AIVAKARGYD--MKVIAVDDQFVN 93 (305)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCGGGHH--HHHHHHHHTT--CEEEEESSCCBC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccccccH--HHHHHHHhcC--CCEEEEcCcccc
Confidence 45566788888999999999986655322 2223444444 678887444433
No 20
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=47.42 E-value=2.9 Score=39.19 Aligned_cols=60 Identities=23% Similarity=0.310 Sum_probs=45.4
Q ss_pred cCCCEEEEeCCchh--HHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhcC
Q 008424 187 LDLDGLVVIGGDDS--NTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKIYAEMIGNVMIDARSTG 264 (566)
Q Consensus 187 l~Id~LviIGGddS--~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~~se~I~ni~~Da~S~~ 264 (566)
.++|+++|-||.|. ..+.-.-++|+++++ ++..| .|+||+.|+=.++.-+-.+ .||.|..
T Consensus 57 ~~~dGIlvPGGFG~rG~eGki~ai~yARen~--iPfLG---------------IClGmQ~avIEfARnvlgl-~~A~s~E 118 (250)
T d1vcoa1 57 RDVSGILVPGGFGVRGIEGKVRAAQYARERK--IPYLG---------------ICLGLQIAVIEFARNVAGL-KGANSTE 118 (250)
T ss_dssp TTCSCEEECCCCSSTTHHHHHHHHHHHHHTT--CCEEE---------------ETHHHHHHHHHHHHHTSCC-TTCEETT
T ss_pred hcCCeEEecCCCCccchHHHHHHHHHHHHcc--hhHHH---------------HHHHHHHHHHHHHHHHHHh-hcccccc
Confidence 36899999999886 444555567877766 46666 5999999998888877777 3877754
No 21
>d1meoa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.28 E-value=28 Score=30.60 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=46.5
Q ss_pred EEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCC-ccccccCCCCCCCH
Q 008424 96 KIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGG-FDMICSGRDKIETP 174 (566)
Q Consensus 96 ~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG-~~~LGSsR~k~~~~ 174 (566)
||||+.||+ | .| +..++++++..+-+.++..+.- +.. +...+......+= +..+.. .......
T Consensus 2 ri~vl~SG~---G-sn-l~aLl~~~~~~~l~~~I~~Vit------n~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 65 (205)
T d1meoa_ 2 RVAVLISGT---G-SN-LQALIDSTREPNSSAQIDIVIS------NKA----AVAGLDKAERAGIPTRVINH-KLYKNRV 65 (205)
T ss_dssp EEEEEESSS---C-TT-HHHHHHHHHSTTCSCEEEEEEE------SST----TCHHHHHHHHTTCCEEECCG-GGSSSHH
T ss_pred EEEEEEeCC---c-Hh-HHHHHHHHhcCCCCCEEEEEEE------CCc----cccccccccccccccccccc-cccchhh
Confidence 899999996 3 22 5567777665444567766541 000 0000111111111 001111 1112224
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCch
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGDD 199 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGdd 199 (566)
+.-+.+.+.++++++|.+|++|-.-
T Consensus 66 ~~~~~l~~~l~~~~~Dliv~~g~~~ 90 (205)
T d1meoa_ 66 EFDSAIDLVLEEFSIDIVCLAGFMR 90 (205)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCS
T ss_pred hHHHHHHHHHhhcccceeeeechhc
Confidence 5567788999999999888877554
No 22
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]}
Probab=41.78 E-value=17 Score=34.72 Aligned_cols=114 Identities=16% Similarity=0.146 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHcCC---CEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHHHH
Q 008424 172 ETPEQFKQATETAVKLDL---DGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTACKI 248 (566)
Q Consensus 172 ~~~e~~~~~~~~l~~l~I---d~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~k~ 248 (566)
++-+.++++.+.+.+.++ +.+|.|||--..+.|...|--+. + +++.|-||-|.=-. ++.|+|--|+++.
T Consensus 65 Ksl~~~~~i~~~l~~~~~~r~~~iiaiGGG~v~D~agf~A~~y~-r--gi~~i~vPTtlla~-----vDs~~g~k~~in~ 136 (347)
T d1ujna_ 65 KSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYL-R--GVAYLAFPTTTLAI-----VDASVGGKTGINL 136 (347)
T ss_dssp SSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHHHHBT-T--CCEEEEEECSHHHH-----HTTTSSCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhhcccccceeEeechhhhhHHHHHhhhhc-C--Ccceeeccchhhhc-----ccccccccccccc
Confidence 356789999999999988 68999999887777776664332 2 47899999886221 1134444443320
Q ss_pred HHHHHHHHHHHHhhcCCeeEEEEEcCCCCchHHHHhhhhcCCcEEEeCCchhhhhcchHhHHHHHHHHHHHHHHc
Q 008424 249 YAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYIVDIICKRAEL 323 (566)
Q Consensus 249 ~se~I~ni~~Da~S~~k~~~fVevMGR~ag~LALe~aLqt~pnivlIpEe~~~~~~tL~~v~~~i~~~I~~R~~~ 323 (566)
...++ .+- --..|..|++--.+.. ..+-+++..-++++|+.-...
T Consensus 137 ------------~~~kn---~~g--------------~f~~P~~v~~D~~~l~-tlp~r~~~sG~~Eiik~~~i~ 181 (347)
T d1ujna_ 137 ------------PEGKN---LVG--------------AFHFPQGVYAELRALK-TLPLPTFKEGLVEAFKHGLIA 181 (347)
T ss_dssp ------------TTEEE---EEE--------------EECCCSEEEEEGGGGG-GSCHHHHHHHHHHHHHHHHHH
T ss_pred ------------ccccc---ccc--------------cccCCCeeeccHHHHH-hhhHHHHHHHHHHHHHHhhcc
Confidence 00111 111 1126888877554432 356677788888888765443
No 23
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=41.22 E-value=46 Score=29.37 Aligned_cols=86 Identities=17% Similarity=0.152 Sum_probs=58.1
Q ss_pred EEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCHH
Q 008424 96 KIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETPE 175 (566)
Q Consensus 96 ~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~e 175 (566)
-|||++..=.-|+...++.|+-+.+++. |.++. +.-+++ .+.+
T Consensus 2 ~igv~~~~l~~~~~~~i~~~i~~~a~~~--Gy~v~--------------------------------v~~~~~---~~~~ 44 (271)
T d1jyea_ 2 LIGVATSSLALHAPSQIVAAILSRADQL--GASVV--------------------------------VSMVER---SGVE 44 (271)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHT--TCEEE--------------------------------EEECCS---SSHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHc--CCEEE--------------------------------EEECCC---CCHH
Confidence 4899999999999999999999987653 33331 001111 1346
Q ss_pred HHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEe
Q 008424 176 QFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGC 223 (566)
Q Consensus 176 ~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGV 223 (566)
+....++.+.+.++||+++.+..+... .+.+++.+.+ ++||.+
T Consensus 45 ~~~~~l~~l~~~~vdgiIl~~~~~~~~---~~~~~~~~~~--iPvV~~ 87 (271)
T d1jyea_ 45 ACKTAVHNLLAQRVSGLIINYPLDDQD---AIAVEAACTN--VPALFL 87 (271)
T ss_dssp HHHHHHHHHHTTTCSCEEEESCCCHHH---HHHHHHHTTT--SCEEES
T ss_pred HHHHHHHHHHhcCCCEEEeccccCchh---HHHHHHHhcC--CCeeee
Confidence 677888999999999999988666532 2223444444 567665
No 24
>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi [TaxId: 556]}
Probab=38.17 E-value=32 Score=32.53 Aligned_cols=61 Identities=13% Similarity=0.138 Sum_probs=40.8
Q ss_pred CHHHHHHHHHHHHH----cCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCC
Q 008424 173 TPEQFKQATETAVK----LDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKE 235 (566)
Q Consensus 173 ~~e~~~~~~~~l~~----l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ 235 (566)
+++++.++.+.+++ -+.|++||.-|-|||.-.+.+-.++.+. +.+||-.=.-.--|..++|
T Consensus 64 ~~~~~~~la~~i~~~~~~~~~dgiVv~HGTDTm~~ta~~Ls~~l~~--~kPVV~TGs~~p~~~~~sD 128 (325)
T d1o7ja_ 64 TGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHLTVKS--DKPVVFVAAMRPATAISAD 128 (325)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCCEEEEECCSTTHHHHHHHHHHHCCC--CSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhcccCcceEEEecCcCcHHHHHHHHHHHhcC--CCCeEEecccccccccCCc
Confidence 67788888777765 3799999999999998866665665554 3456554333333334444
No 25
>d4pgaa_ c.88.1.1 (A:) Glutaminase-asparaginase {Pseudomonas sp., 7A [TaxId: 306]}
Probab=37.86 E-value=32 Score=32.64 Aligned_cols=61 Identities=13% Similarity=0.227 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHH----HcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCC
Q 008424 173 TPEQFKQATETAV----KLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKE 235 (566)
Q Consensus 173 ~~e~~~~~~~~l~----~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ 235 (566)
+++++.++.+.++ ..+.|++||+-|-|||.-.+.+-..+. +.+.+||-.=.-+--|..++|
T Consensus 64 ~~~~w~~l~~~i~~~~~~~~~dG~Vi~HGTDTm~~tA~~L~~~~--~~~kpvVlTGs~~p~~~~~sD 128 (330)
T d4pgaa_ 64 TNDDLLKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSAD 128 (330)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCSEEEEECCSTTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhccCCCCeEEEeCCcCcHHHHHHHHHHhc--CCCCCEEEeccchhccccCcc
Confidence 5666666555554 358999999999999987554444443 556677776544444445445
No 26
>d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Haloferax volcanii [TaxId: 2246]}
Probab=37.21 E-value=10 Score=32.19 Aligned_cols=54 Identities=22% Similarity=0.230 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCC
Q 008424 176 QFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEV 236 (566)
Q Consensus 176 ~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~i 236 (566)
.++.+++.+++.+-+-++||||-.-...+..++ -.+-+--||.+.++|..-+.+
T Consensus 80 s~~~a~~~~~~~~~~~i~IiGG~~iy~~~l~~~-------d~i~lT~I~~~~~gD~~FP~~ 133 (157)
T d1vdra_ 80 SVEEAVDIAASLDAETAYVIGGAAIYALFQPHL-------DRMVLSRVPGEYEGDTYYPEW 133 (157)
T ss_dssp SHHHHHHHHHHTTCSCEEEEECHHHHHHHGGGC-------SEEEEEEEEEECCCSEECCCC
T ss_pred eHHHHHHHHhcCCCceEEEEechHHhhhhcccC-------CEEEEEEeCCcccCCEECCCC
Confidence 357788889999999999999988776543221 235566799999999865444
No 27
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}
Probab=35.96 E-value=51 Score=29.09 Aligned_cols=68 Identities=12% Similarity=0.016 Sum_probs=41.1
Q ss_pred cccccCCCCCCCH--HHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccc-cCCCCCCC
Q 008424 162 DMICSGRDKIETP--EQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTI-DGDLKCKE 235 (566)
Q Consensus 162 ~~LGSsR~k~~~~--e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTI-DNDL~~~~ 235 (566)
.+.||+|.+..++ +.-.+.-+.+-+++++ ||+=||.|-|..++ +-..+.|- .|+||+..+ +..-+++.
T Consensus 37 ~Vfgsa~~~~~~~~y~~A~~LG~~La~~g~~-lv~GGg~GlMgava---~ga~~~gG--~viGi~~~~~~~~~~~~~ 107 (208)
T d1weka_ 37 SVFGSARFGEGHPAYEAGYRLGRALAEAGFG-VVTGGGPGVMEAVN---RGAYEAGG--VSVGLNIELPHEQKPNPY 107 (208)
T ss_dssp EEECCSSCCTTSHHHHHHHHHHHHHHHHTCE-EEECSCSHHHHHHH---HHHHHTTC--CEEEEEECCTTCCCCCSC
T ss_pred EEECCCCCCCcChHHHHHHHHHHHHHhCcce-EEeCCCchHHHHHH---hhhhhcCC--ceeccccccccccccccc
Confidence 3789999887543 3334456667788875 66766666665554 44455553 589985443 44434433
No 28
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.70 E-value=21 Score=33.56 Aligned_cols=40 Identities=25% Similarity=0.335 Sum_probs=29.0
Q ss_pred HHHHHhhcCCeeEEEEEcCC-CCchHHHHh-hhhcCCcEEEe
Q 008424 256 VMIDARSTGKYYHFVRLMGR-AASHITLEC-ALQTHPNITII 295 (566)
Q Consensus 256 i~~Da~S~~k~~~fVevMGR-~ag~LALe~-aLqt~pnivlI 295 (566)
+.+..+...+.+.||=+||- |+||++|-- |...+.+++++
T Consensus 21 ~~~~~~~~g~~i~~VPTMGaLH~GHlsLi~~a~~~~~~~vvv 62 (286)
T d2a84a1 21 VSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVV 62 (286)
T ss_dssp HHHHHHHTTCCEEEEEECSSCCHHHHHHHHHHHTSTTCEEEE
T ss_pred HHHHHHHhCCeEEEEeCCcchhHHHHHHHHHHhhcCCCEEEE
Confidence 33344455677999999998 999999874 44467777664
No 29
>d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=35.09 E-value=97 Score=26.74 Aligned_cols=68 Identities=9% Similarity=0.177 Sum_probs=51.4
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCH
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETP 174 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~ 174 (566)
+.|||++-.-+.|-.+..+.|+.+.+++. |..++ +..+ . .++
T Consensus 3 k~Igvi~p~~~~~~~~~~~~~i~~~~~~~--Gy~~~---------------------------------~~~s--~-~d~ 44 (255)
T d1byka_ 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQ--GYDPI---------------------------------MMES--Q-FSP 44 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHH--TCEEE---------------------------------EEEC--T-TCH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEE---------------------------------EEeC--C-CCH
Confidence 78999999999999999999999998764 33322 1111 1 145
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCchh
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGDDS 200 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGddS 200 (566)
+...+.++.+..+++||+++.+=+..
T Consensus 45 ~~~~~~i~~l~~~~vdgiIi~~~~~~ 70 (255)
T d1byka_ 45 QLVAEHLGVLKRRNIDGVVLFGFTGI 70 (255)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred HHHHHHHHHHHhccccceeeccccch
Confidence 66677889999999999999876543
No 30
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=33.75 E-value=26 Score=27.94 Aligned_cols=50 Identities=20% Similarity=0.228 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEe
Q 008424 171 IETPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGC 223 (566)
Q Consensus 171 ~~~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGV 223 (566)
+++-++..++.+.+.+....-++||||--. +..+|+.+.+.|.++.+|-.
T Consensus 12 ~~~~~da~~i~~~~~~~~~k~vvViGgG~i---G~E~A~~l~~~g~~Vtlie~ 61 (123)
T d1nhpa2 12 MRGRQWAIKLKQKTVDPEVNNVVVIGSGYI---GIEAAEAFAKAGKKVTVIDI 61 (123)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEEEECCSHH---HHHHHHHHHHTTCEEEEEES
T ss_pred eCCHHHHHHHHHHhhccCCCEEEEECChHH---HHHHHHHhhccceEEEEEEe
Confidence 556677888888887778889999988653 44567777788888777643
No 31
>d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes [TaxId: 844]}
Probab=32.27 E-value=24 Score=33.58 Aligned_cols=61 Identities=8% Similarity=0.123 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHHH----cCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCC
Q 008424 173 TPEQFKQATETAVK----LDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKE 235 (566)
Q Consensus 173 ~~e~~~~~~~~l~~----l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ 235 (566)
+++++.++.+.+++ .+.|++||+-|-|||.-.+..-.++.+. ..+||-.=.-+--|..++|
T Consensus 62 ~~~~w~~l~~~i~~~~~~~~~dGiVv~HGTDTm~~ta~~Ls~~~~~--~kPVV~TGa~~p~~~~~sD 126 (328)
T d1wsaa_ 62 TGKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNLTVKS--QKPVVLVGAMRPGSSMSAD 126 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSTTCCCEEEECCSSSHHHHHHHHHHHCCC--SSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhccCCCceEEEeCCcCcHHHHHHHHHHhccC--CCCEEEecccccCCCcCcc
Confidence 56777777777755 4799999999999998766555555544 4466665444444455455
No 32
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]}
Probab=31.36 E-value=36 Score=32.93 Aligned_cols=111 Identities=12% Similarity=0.131 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHcCC-----CEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCCCCCCCChHHHH
Q 008424 172 ETPEQFKQATETAVKLDL-----DGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKEVPASFGFDTAC 246 (566)
Q Consensus 172 ~~~e~~~~~~~~l~~l~I-----d~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ie~S~GFdTA~ 246 (566)
++-+.++++.+.+.++++ |.+|-+||--.++.|...|.-+. + +++.|-||-|.--+. +.|+|--|++
T Consensus 81 Ks~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~-r--gi~~i~vPTtlla~~-----Das~g~k~~i 152 (389)
T d1sg6a_ 81 KSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYM-R--GVRYVQVPTTLLAMV-----DSSIGGKTAI 152 (389)
T ss_dssp SSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGG-G--CCEEEEEECSHHHHH-----TTTSSCEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCcCCCceEEEeccchHHHHHHHHHHHHh-c--CCceeEeccchhccc-----cccccceeee
Confidence 356778899999988884 58999999999988888876443 2 478999998752211 1233322221
Q ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEEcCCCCchHHHHhhhhcCCcEEEeCCchhhhhcchHhHHHHHHHHHHHH
Q 008424 247 KIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYIVDIICKR 320 (566)
Q Consensus 247 k~~se~I~ni~~Da~S~~k~~~fVevMGR~ag~LALe~aLqt~pnivlIpEe~~~~~~tL~~v~~~i~~~I~~R 320 (566)
+. ...++++ +.-..|..|++--++.. ...-+.+..-++|+|+.-
T Consensus 153 n~------------~~~kn~~-----------------g~~~~P~~V~iD~~~l~-tlP~r~~~aG~~e~ik~~ 196 (389)
T d1sg6a_ 153 DT------------PLGKNLI-----------------GAIWQPTKIYIDLEFLE-TLPVREFINGMAEVIKTA 196 (389)
T ss_dssp EE------------TTEEEEE-----------------EEECCCSEEEEEGGGGG-TSCHHHHHHHHHHHHHHH
T ss_pred cc------------cccccee-----------------eecchhhhhhhhhhhhc-chHHHHHHhhhhhhhhhh
Confidence 10 0011111 11246899998666543 356677888888888543
No 33
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]}
Probab=30.58 E-value=1.6e+02 Score=27.40 Aligned_cols=61 Identities=10% Similarity=0.076 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHH--cCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCC
Q 008424 173 TPEQFKQATETAVK--LDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKE 235 (566)
Q Consensus 173 ~~e~~~~~~~~l~~--l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ 235 (566)
+++++..+.+.+++ -+.|++||+-|-|||.-.+..-..+.+ .+.+||-.=.-.--|..++|
T Consensus 62 ~~~~~~~l~~~i~~~~~~~dG~Vv~HGTDTm~~tA~~L~~~~~--~~kpVV~TGa~~p~~~~~sD 124 (326)
T d1nnsa_ 62 NDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVK--CDKPVVMVGAMRPSTSMSAD 124 (326)
T ss_dssp CHHHHHHHHHHHHHHGGGCSEEEEECCSSSHHHHHHHHHHHCC--CCSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHhhccCCcEEEecCcCcHHHHHHHHHHHhc--cCCcEEEeccccccCCCCcc
Confidence 56777777666655 579999999999999875554445443 45677776554545555555
No 34
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=29.92 E-value=20 Score=34.04 Aligned_cols=51 Identities=27% Similarity=0.302 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCC
Q 008424 174 PEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGD 230 (566)
Q Consensus 174 ~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDND 230 (566)
++.++++. .+.+.+.|.+|-|||--.++.|..++-. .++++|.||-|--.|
T Consensus 70 ~~~i~~~~-~~~~~~~D~IIavGGGs~~D~aK~ia~~-----~~~P~I~IPTTa~tg 120 (364)
T d1kq3a_ 70 DEEIERLS-GLVEEETDVVVGIGGGKTLDTAKAVAYK-----LKKPVVIVPTIASTD 120 (364)
T ss_dssp HHHHHHHH-TTCCTTCCEEEEEESHHHHHHHHHHHHH-----TTCCEEEEESSCCCS
T ss_pred cHHHHHHH-HHhhccCcEEEEeccCccceeecccccc-----ccccceeeccccccc
Confidence 44555543 3456799999999998888887777632 257899999884433
No 35
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}
Probab=29.32 E-value=34 Score=29.24 Aligned_cols=10 Identities=30% Similarity=0.478 Sum_probs=8.3
Q ss_pred CCceEEEeec
Q 008424 216 LKTLVMGCPK 225 (566)
Q Consensus 216 ~~i~VIGVPK 225 (566)
...+|||||-
T Consensus 78 t~~PVIgVP~ 87 (155)
T d1xmpa_ 78 TNLPVIGVPV 87 (155)
T ss_dssp CCSCEEEEEE
T ss_pred ccceEEEEEe
Confidence 4679999996
No 36
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=29.28 E-value=47 Score=27.69 Aligned_cols=51 Identities=12% Similarity=0.154 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC---chh-HHHHHHHHHHHhhcCCCceEEEeec
Q 008424 173 TPEQFKQATETAVKLDLDGLVVIGG---DDS-NTNACLLAEHFRSKNLKTLVMGCPK 225 (566)
Q Consensus 173 ~~e~~~~~~~~l~~l~Id~LviIGG---ddS-~t~A~~Lae~~~~~~~~i~VIGVPK 225 (566)
+.|-++++++.+++.+.|.+|+.|. .+. -..+..+.+.+.+.+ ++|+.||.
T Consensus 17 ~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~--~pv~~i~G 71 (228)
T d1uf3a_ 17 DLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTAYVPG 71 (228)
T ss_dssp CHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGC--SCEEEECC
T ss_pred CHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhcccc--ceEEEEec
Confidence 3478999999999999999999987 222 234455556666554 57888886
No 37
>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}
Probab=26.47 E-value=1.2e+02 Score=25.55 Aligned_cols=58 Identities=21% Similarity=0.229 Sum_probs=35.6
Q ss_pred ccccCCCCCCCH--HHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEe-ecc
Q 008424 163 MICSGRDKIETP--EQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGC-PKT 226 (566)
Q Consensus 163 ~LGSsR~k~~~~--e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGV-PKT 226 (566)
+.||+|.+..++ +.-++.-+.+-+++.+ ||+=||.|.|..+ ++-..+.|- .|||| |.+
T Consensus 6 Vfgss~~~~~~~~~~~a~~lG~~la~~g~~-lv~GGg~G~M~a~---a~ga~~~gG--~~iGv~~~~ 66 (171)
T d1weha_ 6 VFVSSRLSPEDPLYARWVRYGEVLAEEGFG-LACGGYQGGMEAL---ARGVKAKGG--LVVGVTAPA 66 (171)
T ss_dssp EECCSSCCTTSHHHHHHHHHHHHHHHTTEE-EEECCSSTHHHHH---HHHHHHTTC--CEEECCCGG
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHCCCc-eeeCcchHHHHHH---HHHHHhccC--ceeeeeecc
Confidence 568999877543 3344455667777774 6665666555544 455555554 48888 554
No 38
>d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]}
Probab=26.26 E-value=58 Score=30.59 Aligned_cols=61 Identities=8% Similarity=0.129 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHH----cCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCCCCCCC
Q 008424 173 TPEQFKQATETAVK----LDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGDLKCKE 235 (566)
Q Consensus 173 ~~e~~~~~~~~l~~----l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~~~~ 235 (566)
+++++.++.+.+++ -+.|++||+-|-|||.-.+..-.++... ..+||-.=.-+--|-.++|
T Consensus 63 ~~~~w~~la~~i~~~~~~~~~dG~VVtHGTDTm~~TA~~Ls~~l~~--~kPVVlTGsqrp~~~~~sD 127 (331)
T d1agxa_ 63 TDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVVHT--DKPIVLVGSMRPSTALSAD 127 (331)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCCEEEEECCGGGHHHHHHHHHHHCCC--SSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhcccCCceEEEecCcCcHHHHHHHHHHHhcc--CCcEEEEeeccccCCCCcc
Confidence 56777776666653 4799999999999998765554555543 4556554333333444444
No 39
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=25.81 E-value=1.9e+02 Score=24.73 Aligned_cols=96 Identities=8% Similarity=-0.071 Sum_probs=62.5
Q ss_pred CcEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCC
Q 008424 94 KLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIET 173 (566)
Q Consensus 94 ~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~ 173 (566)
.++||+|.....-|=-..+..|+-+.++.+ +.++. +.+.+. .+
T Consensus 3 ~~kI~~i~~~~~npf~~~~~~g~~~~a~~~--G~~v~--------------------------------~~~~~~---~d 45 (316)
T d1tjya_ 3 AERIAFIPKLVGVGFFTSGGNGAQEAGKAL--GIDVT--------------------------------YDGPTE---PS 45 (316)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHHHHH--TCEEE--------------------------------ECCCSS---CC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEE--------------------------------EEECCC---CC
Confidence 479999999999999999999999998764 23321 011111 13
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccccCC
Q 008424 174 PEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTIDGD 230 (566)
Q Consensus 174 ~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTIDND 230 (566)
.++..+.++.+...++|++|+...+..... ..+.+ ..+.+ ++||.+--.+.++
T Consensus 46 ~~~q~~~i~~~i~~~~dgIIi~~~~~~~~~-~~~~~-a~~~g--i~vv~~d~~~~~~ 98 (316)
T d1tjya_ 46 VSGQVQLVNNFVNQGYDAIIVSAVSPDGLC-PALKR-AMQRG--VKILTWDSDTKPE 98 (316)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSSSTTH-HHHHH-HHHTT--CEEEEESSCCCGG
T ss_pred HHHHHHHHHHHHhcCCCeeeecccccchhh-hhhhh-hhccc--ccceecccccccc
Confidence 456677788888999999999988765322 22322 23333 5677664444433
No 40
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}
Probab=25.60 E-value=49 Score=30.10 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=34.3
Q ss_pred HHHHHHHc--CCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeecc
Q 008424 180 ATETAVKL--DLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKT 226 (566)
Q Consensus 180 ~~~~l~~l--~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKT 226 (566)
..|.++++ ++|++|+--|.|++-.. ++.+|++.+-.++||||=..
T Consensus 156 ~~EI~~q~~~~~d~vv~~vG~Gg~~~G--i~~~~~~~~~~~~iigve~~ 202 (302)
T d1ve1a1 156 GPELYEALEGRIDAFVYGSGTGGTITG--VGRYLKERIPHVKVIAVEPA 202 (302)
T ss_dssp HHHHHHHTTTCCSEEEEECSSSHHHHH--HHHHHHTTCTTCEEEEEEEG
T ss_pred HHHHHHHcCCCCCeEEEeecCcHHHHH--HHHHHHhcCCCCEEEEEEec
Confidence 35667776 49999998888876544 66788888888999998543
No 41
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.55 E-value=47 Score=29.18 Aligned_cols=48 Identities=25% Similarity=0.181 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeec
Q 008424 172 ETPEQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPK 225 (566)
Q Consensus 172 ~~~e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPK 225 (566)
.|++-++.+++.+++++|+.+|+---.|. +|.++.+.++ | +++|.|.-
T Consensus 16 NT~~~l~~a~~rA~Elgi~~iVvAStsG~--TA~~~~e~~~--g--~~lvvVth 63 (190)
T d1vp8a_ 16 NTEETLRLAVERAKELGIKHLVVASSYGD--TAMKALEMAE--G--LEVVVVTY 63 (190)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSH--HHHHHHHHCT--T--CEEEEEEC
T ss_pred cHHHHHHHHHHHHHHcCCCeEEEEeCCcH--HHHHHHHHhc--C--CeEEEEec
Confidence 46777899999999999999999877665 7888888773 3 57887764
No 42
>d1o6da_ c.116.1.3 (A:) Hypothetical protein TM0844 {Thermotoga maritima [TaxId: 2336]}
Probab=25.23 E-value=84 Score=25.83 Aligned_cols=92 Identities=18% Similarity=0.187 Sum_probs=54.4
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcc--------------cccchhccCC
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSN--------------YIYPYRNQGG 160 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~--------------~v~~~~n~GG 160 (566)
++|=|+..|-. +. -.-.++-+|++...+..++- ++++.+. .+-.....++
T Consensus 1 Mki~Ii~iGK~-~~--~~~~~i~~Y~kRl~~~~~~~-------------iielk~~~~~~~~~~~~~E~~~il~~i~~~~ 64 (147)
T d1o6da_ 1 LRVRIAVIGKL-DG--FIKEGIKHYEKFLRRFCKPE-------------VLEIKRVHRGSIEEIVRKETEDLTNRILPGS 64 (147)
T ss_dssp CEEEEEEESCC-CH--HHHHHHHHHHHHHTTTCEEE-------------EEEECCCCCSCHHHHHHHHHHHHHTTCCTTC
T ss_pred CEEEEEEEeCc-CH--HHHHHHHHHHHHhcCCCCce-------------EEEeccccCCCHHHHHHHHHHHHhccCCCCC
Confidence 46778888864 53 45567778888887766542 2222110 0111112233
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhHH
Q 008424 161 FDMICSGRDKIETPEQFKQATETAVKLDLDGLVVIGGDDSNT 202 (566)
Q Consensus 161 ~~~LGSsR~k~~~~e~~~~~~~~l~~l~Id~LviIGGddS~t 202 (566)
+-++-.-|.+-.+.++|.+-++.....+=+-.++|||-+...
T Consensus 65 ~~I~LDe~Gk~~sS~~fA~~l~~~~~~g~~i~FiIGGa~Gl~ 106 (147)
T d1o6da_ 65 FVMVMDKRGEEVSSEEFADFLKDLEMKGKDITILIGGPYGLN 106 (147)
T ss_dssp EEEEEEEEEEECCHHHHHHHHHHHHHHTCCEEEEECCTTCCC
T ss_pred EEEEEecccCCcCCHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 333334444545678888888887777778899999976543
No 43
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.83 E-value=64 Score=25.83 Aligned_cols=49 Identities=16% Similarity=0.339 Sum_probs=34.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCchh-HHHHHHHHHHHhhcCCCceEE
Q 008424 171 IETPEQFKQATETAVKLDLDGLVVIGGDDS-NTNACLLAEHFRSKNLKTLVM 221 (566)
Q Consensus 171 ~~~~e~~~~~~~~l~~l~Id~LviIGGddS-~t~A~~Lae~~~~~~~~i~VI 221 (566)
+++-++++++.+.+++ ...++||||--+ ..-|..|+++.++.|.++.+|
T Consensus 21 ~r~~~d~~~l~~~~~~--~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i 70 (137)
T d1m6ia2 21 FRKIGDFRSLEKISRE--VKSITIIGGGFLGSELACALGRKARALGTEVIQL 70 (137)
T ss_dssp CCSHHHHHHHHHHHHH--CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EcCHHHHHHHHHHhhc--CCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEe
Confidence 4577888888888765 467778877544 666788887777677765555
No 44
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=24.58 E-value=33 Score=32.00 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=31.3
Q ss_pred HHHHHHhhcCCeeEEEEEcCC-CCchHHHHhhhhcCCcEEEeC
Q 008424 255 NVMIDARSTGKYYHFVRLMGR-AASHITLECALQTHPNITIIG 296 (566)
Q Consensus 255 ni~~Da~S~~k~~~fVevMGR-~ag~LALe~aLqt~pnivlIp 296 (566)
+.....+...+.+.||=+||- |.||++|-=.-...++.++++
T Consensus 12 ~~~~~~r~~g~~ig~VPTMGaLH~GHlsLi~~A~~~~~~vvvS 54 (282)
T d1ihoa_ 12 QQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVS 54 (282)
T ss_dssp HHHHHHHHTTCCEEEEEECSCCCHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHcCCcEEEEcCCcchhHHHHHHHHHHHHhCCcEEEE
Confidence 333444555678999999998 899999966666677777763
No 45
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=24.34 E-value=62 Score=29.68 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCCEE--EEeCCchhHHHHHHHHHHHhhcCCCceEEEeec
Q 008424 176 QFKQATETAVKLDLDGL--VVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPK 225 (566)
Q Consensus 176 ~~~~~~~~l~~l~Id~L--viIGGddS~t~A~~Lae~~~~~~~~i~VIGVPK 225 (566)
.++++++.+++.+=.+| ++.+||-+......+.+.+.+.|.++-=+|+|=
T Consensus 3 ri~~~f~~lk~~~~~ali~y~t~G~P~~~~~~~~~~~l~~~GaDiiElGiPf 54 (267)
T d1qopa_ 3 RYENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPF 54 (267)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCC
T ss_pred hHHHHHHHHHHcCCceEEEEEeCcCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 36788889999998887 788999999999999999999999999999994
No 46
>d1ig3a2 c.100.1.1 (A:10-178) Thiamin pyrophosphokinase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.49 E-value=63 Score=27.70 Aligned_cols=114 Identities=16% Similarity=0.209 Sum_probs=63.8
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcC----------CCEE-----ecCcccccchhccC
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMK----------CKYV-----ELTSNYIYPYRNQG 159 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~----------~~~~-----eLt~~~v~~~~n~G 159 (566)
.+.++|..-.+-|- .++.+++. ..-.+..=+|..=|++ -+++ -++++..+.|...|
T Consensus 28 ~~~aliiLN~pi~~-------~~~~lw~~--a~~~I~aDGGAN~L~d~~~~~~~~~~PD~IiGDfDSi~~~~~~~~~~~g 98 (169)
T d1ig3a2 28 LKYCLVVLNQPLDA-------RFRHLWKK--ALLRACADGGANHLYDLTEGERESFLPEFVSGDFDSIRPEVKEYYTKKG 98 (169)
T ss_dssp CCEEEEECSSCCCT-------THHHHHHH--CSEEEEETTHHHHHHHTCTTCGGGCCCSEEEECTTSSCHHHHHHHHHTT
T ss_pred cCEEEEEeCCCcCH-------HHHHHHHh--CCEEEEEcCHHHHHHHHhhccccCCCCCEEEecCCCCChHHHHHHHhcC
Confidence 45666666667652 23333322 3455666666544432 1222 23334455566655
Q ss_pred CccccccCCCCCCCHHHHHHHHHHHHHc------CCCEEEEeCCc-----hhHHHHHHHHHHHhhcCCCceEEEe
Q 008424 160 GFDMICSGRDKIETPEQFKQATETAVKL------DLDGLVVIGGD-----DSNTNACLLAEHFRSKNLKTLVMGC 223 (566)
Q Consensus 160 G~~~LGSsR~k~~~~e~~~~~~~~l~~l------~Id~LviIGGd-----dS~t~A~~Lae~~~~~~~~i~VIGV 223 (566)
- .++-.. .+ +..+++++++.|.++ +++.++++||. -++.+...|.++- +-.+++||-+
T Consensus 99 ~-~ii~~~-dQ--D~TD~eKAl~~~~~~~~~~~~~~~~I~vlG~~GGR~DH~lanl~~L~~~~--~~~~~~VIll 167 (169)
T d1ig3a2 99 C-DLISTP-DQ--DHTDFTKCLQVLQRKIEEKELQVDVIVTLGGLGGRFDQIMASVNTLFQAT--HITPVPIIII 167 (169)
T ss_dssp C-EEEECC-CT--TSCHHHHHHHHHHHHHHHTTCCCSEEEEECCSSSCHHHHHHHHHHHHHGG--GTCSSCEEEE
T ss_pred C-eEEECc-cc--CcchHHHHHHHHHHhhhhhccCCCEEEEEeCCCCcHHHHHHHHHHHHHhh--cCCCCcEEEe
Confidence 4 455322 22 446799999888643 89999999994 4566666665542 2234667654
No 47
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=23.15 E-value=31 Score=26.87 Aligned_cols=30 Identities=27% Similarity=0.330 Sum_probs=22.9
Q ss_pred HHHHHHHHHhhcCCCceEEEeeccccCCCC
Q 008424 203 NACLLAEHFRSKNLKTLVMGCPKTIDGDLK 232 (566)
Q Consensus 203 ~A~~Lae~~~~~~~~i~VIGVPKTIDNDL~ 232 (566)
....|.+.+.+.+...-|||.|+..||...
T Consensus 39 ~~~~l~~ii~e~~i~~iVvGlP~~~dG~~~ 68 (98)
T d1iv0a_ 39 DVEALLDFVRREGLGKLVVGLPLRTDLKES 68 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSC
T ss_pred HHHHHHHHHHhhccceeEcccccccCCCcC
Confidence 345566666677788889999999998764
No 48
>d1b5ta_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Escherichia coli [TaxId: 562]}
Probab=22.59 E-value=36 Score=31.30 Aligned_cols=32 Identities=19% Similarity=0.318 Sum_probs=27.4
Q ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCch
Q 008424 166 SGRDKIETPEQFKQATETAVKLDLDGLVVIGGDD 199 (566)
Q Consensus 166 SsR~k~~~~e~~~~~~~~l~~l~Id~LviIGGdd 199 (566)
|||.+ +.+.++..+..+..++|+.+++++||-
T Consensus 70 t~r~~--n~~~l~~~l~~~~~~GI~niL~l~GD~ 101 (275)
T d1b5ta_ 70 TCIDA--TPDELRTIARDYWNNGIRHIVALRGDL 101 (275)
T ss_dssp CSTTC--CHHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred ccccc--cHhHHHHHHHHHHHHhhCeEEEecCCC
Confidence 56663 567889999999999999999999995
No 49
>d1v93a_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Thermus thermophilus [TaxId: 274]}
Probab=22.50 E-value=35 Score=31.57 Aligned_cols=76 Identities=12% Similarity=0.205 Sum_probs=45.3
Q ss_pred HHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccc--cCCCCCCCHHHHHHHHHHHHHcCCCEE
Q 008424 115 GIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMIC--SGRDKIETPEQFKQATETAVKLDLDGL 192 (566)
Q Consensus 115 gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LG--SsR~k~~~~e~~~~~~~~l~~l~Id~L 192 (566)
..++.|+..+|. -+-+-+|..|-.....+.+ ...++++ |.+.+- |||.+ +..+++..+..+..++|+.+
T Consensus 33 ~~~~~L~~~~p~--fisVT~~~~g~~~~~tl~~----a~~l~~~-G~~~i~Hlt~r~~--n~~~l~~~l~~~~~~GI~ni 103 (292)
T d1v93a_ 33 RTLEELKAFRPA--FVSITYGAMGSTRERSVAW----AQRIQSL-GLNPLAHLTVAGQ--SRKEVAEVLHRFVESGVENL 103 (292)
T ss_dssp HHHHHHHTTCCS--EEEECCCGGGTTHHHHHHH----HHHHHHT-TCCEEEEECCTTS--CHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHhcCCCC--EEEecCCCCCccchhHHHH----HHHHHhC-CCCceeeeeecCc--hHHHHHHHHHHHHHhCcCeE
Confidence 344455443332 2345555555443222211 2223444 344333 57764 57889999999999999999
Q ss_pred EEeCCch
Q 008424 193 VVIGGDD 199 (566)
Q Consensus 193 viIGGdd 199 (566)
++++||.
T Consensus 104 Lal~GD~ 110 (292)
T d1v93a_ 104 LALRGDP 110 (292)
T ss_dssp EECCCCC
T ss_pred eeccCCC
Confidence 9999985
No 50
>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=22.49 E-value=54 Score=27.78 Aligned_cols=40 Identities=13% Similarity=0.058 Sum_probs=23.3
Q ss_pred HHHHHHHcCCCEEEEeCCchhHHH-HHHHHHHHhhcCCCce
Q 008424 180 ATETAVKLDLDGLVVIGGDDSNTN-ACLLAEHFRSKNLKTL 219 (566)
Q Consensus 180 ~~~~l~~l~Id~LviIGGddS~t~-A~~Lae~~~~~~~~i~ 219 (566)
+++.+++.+.+.+++.+-|+++.. +..+.+.+++.|.++.
T Consensus 78 ~v~aa~~~~a~vvvicssd~~y~~~~~~~~~aLk~ag~~~~ 118 (163)
T d7reqb2 78 IVEAFKKSGAQVADLCSSAKVYAQQGLEVAKALKAAGAKAL 118 (163)
T ss_dssp HHHHHHHHTCSEEEEECCHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhCCCCEEEEecCccchHHHHHHHHHHHHhccccee
Confidence 445566667776666666666443 3456666666665543
No 51
>d2fvya1 c.93.1.1 (A:2-306) Galactose/glucose-binding protein {Escherichia coli [TaxId: 562]}
Probab=21.99 E-value=2.2e+02 Score=24.18 Aligned_cols=92 Identities=13% Similarity=0.081 Sum_probs=59.7
Q ss_pred cEEEEEeCCCCCchhhHHHHHHHHHHHhhCCCCEEEEEccChhhhcCCCEEecCcccccchhccCCccccccCCCCCCCH
Q 008424 95 LKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSNYIYPYRNQGGFDMICSGRDKIETP 174 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k~~~~ 174 (566)
.||||++....-|=..+++.|+-+.++. +.+.++. +..+. .+.
T Consensus 2 ~kIgv~~~~~~~~f~~~i~~gi~~~a~~-~~~~~l~---------------------------------~~~~~---~~~ 44 (305)
T d2fvya1 2 TRIGVTIYKYDDNFMSVVRKAIEQDAKA-APDVQLL---------------------------------MNDSQ---NDQ 44 (305)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHT-CTTEEEE---------------------------------EEECT---TCH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHH-cCCcEEE---------------------------------EEcCC---CCH
Confidence 5899999998889999999999887643 2233332 00111 134
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCchhHHHHHHHHHHHhhcCCCceEEEeeccc
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGDDSNTNACLLAEHFRSKNLKTLVMGCPKTI 227 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGddS~t~A~~Lae~~~~~~~~i~VIGVPKTI 227 (566)
+...+.++.+...++|++++..-+....... +.+. .+. +++|+.+..-+
T Consensus 45 ~~q~~~i~~li~~~vDgiii~~~~~~~~~~~-~~~~-~~~--~ipvv~~~~~~ 93 (305)
T d2fvya1 45 SKQNDQIDVLLAKGVKALAINLVDPAAAGTV-IEKA-RGQ--NVPVVFFNKEP 93 (305)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSSGGGHHHH-HHHH-HTT--TCCEEEESSCC
T ss_pred HHHHHHHHHHHHcCCCEEEeecccccccHHH-HHHH-Hhc--CCceeeeeecc
Confidence 5566677888889999999998887754443 3222 333 45677764433
No 52
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=20.85 E-value=62 Score=28.80 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=51.1
Q ss_pred cEEEEEeCCCCCchhhHH-HHHHHHHHHhhCCCCEEEEE--ccChh-hhcCCCEEecCcccccchhccCCccccccCCCC
Q 008424 95 LKIGVVLSGGQAPGGHNV-ISGIYDYLQDRAKGSVLYGF--RGGPA-GIMKCKYVELTSNYIYPYRNQGGFDMICSGRDK 170 (566)
Q Consensus 95 ~~IgIv~sGG~aPG~nnv-I~gl~~~l~~~~~~~~v~Gf--~~G~~-GLl~~~~~eLt~~~v~~~~n~GG~~~LGSsR~k 170 (566)
+||-|.+ ||- |||.. -.++.++|++ +|.+|.-+ .+|.+ -++...-.++..-....++..+.+..+ -..
T Consensus 1 kkili~~-~Gt--GGHv~~a~al~~~L~~--~G~eV~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 72 (351)
T d1f0ka_ 1 KRLMVMA-GGT--GGHVFPGLAVAHHLMA--QGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALI---AAP 72 (351)
T ss_dssp CEEEEEC-CSS--HHHHHHHHHHHHHHHT--TTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHH---TCH
T ss_pred CEEEEEc-CCc--HHHHHHHHHHHHHHHh--CCCEEEEEEeCCcchhhcccccCCcEEEEECCCcCCCCHHHHH---HHH
Confidence 5787766 453 68853 3467777754 46777533 23321 222221111111011111111111000 000
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCchhHHH
Q 008424 171 IETPEQFKQATETAVKLDLDGLVVIGGDDSNTN 203 (566)
Q Consensus 171 ~~~~e~~~~~~~~l~~l~Id~LviIGGddS~t~ 203 (566)
+.....+....+.+++.+-+.++..|++-+...
T Consensus 73 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 105 (351)
T d1f0ka_ 73 LRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPG 105 (351)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHH
T ss_pred HHHHHhHHHHHHHhhccccceeeecccchhhhh
Confidence 112355677888999999999999998776554
No 53
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=20.66 E-value=96 Score=25.94 Aligned_cols=24 Identities=21% Similarity=0.230 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEeCCc
Q 008424 175 EQFKQATETAVKLDLDGLVVIGGD 198 (566)
Q Consensus 175 e~~~~~~~~l~~l~Id~LviIGGd 198 (566)
+.++++++.+++.++|.+|+.|.-
T Consensus 16 ~~l~~l~~~~~~~~~D~vli~GDl 39 (257)
T d2yvta1 16 DLLPKLKGVIAEKQPDILVVVGNI 39 (257)
T ss_dssp GGHHHHHHHHHHHCCSEEEEESCC
T ss_pred HHHHHHHHHHhhcCCCEEEEeccc
Confidence 557899999999999998877764
No 54
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=20.30 E-value=1.1e+02 Score=24.32 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=27.1
Q ss_pred EEEeCCchh--HHHHHHHHHHHhhcCCCceEEEeecc
Q 008424 192 LVVIGGDDS--NTNACLLAEHFRSKNLKTLVMGCPKT 226 (566)
Q Consensus 192 LviIGGddS--~t~A~~Lae~~~~~~~~i~VIGVPKT 226 (566)
+|+.|.+|| =|.+..|++.+.+++..+.++..|-|
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~~d~ 40 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDF 40 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 566787766 67789999999988988877776543
Done!