BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008426
(566 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224077082|ref|XP_002305124.1| predicted protein [Populus trichocarpa]
gi|222848088|gb|EEE85635.1| predicted protein [Populus trichocarpa]
Length = 752
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/579 (64%), Positives = 450/579 (77%), Gaps = 23/579 (3%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
MGLPE+ +F+RNF V+VR+QGPDPKGLKMR+HAFHQYNSGKTTLSASG+LLP + +D +
Sbjct: 1 MGLPEIVDFARNFAVMVRIQGPDPKGLKMRKHAFHQYNSGKTTLSASGLLLPDTLYDADL 60
Query: 61 AER-----NWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGK--LR 113
A R + G+ GL+VTVASV+EPFL ++R+ S+ +PELI G+QID + EGK LR
Sbjct: 61 ANRILEGKSQGL-GLVVTVASVIEPFLSSKHRES-ISQSRPELIPGAQIDVMAEGKSDLR 118
Query: 114 SEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNS 173
+ + +DKG+ W+ AQ++ LVD+P+SSLALQSL+EASSG H WEVGWSLA N
Sbjct: 119 NGADG-GLDKGTSHWLRAQVIRLVDVPLSSLALQSLVEASSGSMNHGWEVGWSLASPENG 177
Query: 174 SQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIA 233
SQ M VV+T E S+ ES R A EESSN S+M KST+RVAILGV +LKDLPN
Sbjct: 178 SQSFMDVVQTQTEHGNASIAESQR-RAREESSNPSIMGKSTTRVAILGVFLHLKDLPNFE 236
Query: 234 LTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGME 293
++ ++RGD LLAVGSPFGVLSP+HFFNS+S+GS+ANCYPPRS+ SLLMADIRCLPGME
Sbjct: 237 ISASSRRGDFLLAVGSPFGVLSPVHFFNSLSVGSIANCYPPRSSDISLLMADIRCLPGME 296
Query: 294 GGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINK 352
G PVF E+++F+GILIRPLRQK SGAEIQLVIPWEAIA ACSDLLLKEPQNAEK IHINK
Sbjct: 297 GSPVFCENSNFIGILIRPLRQKSSGAEIQLVIPWEAIALACSDLLLKEPQNAEKGIHINK 356
Query: 353 GNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVL 412
NLNAVGN+ +S +G K+EH S C SP P++KA+AS+CLITID+ VWASGVL
Sbjct: 357 ENLNAVGNAYSSSS---DGPFPLKHEHHISYCSSPPPVEKAMASICLITIDELVWASGVL 413
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQ-----PEDSASSGHTGVDQYQKSQTL 467
LNDQGLILTNAHLLEPWRFGKTTV+G +G Q PE+ ++ VD ++K+Q L
Sbjct: 414 LNDQGLILTNAHLLEPWRFGKTTVNGGEDGTKLQDPFIPPEEFPR--YSEVDGHEKTQRL 471
Query: 468 PPKMPKIVDSSV-DEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSL 526
PPK I++SSV DE + YKLS +G IRVRLDH DPWIWCDAK+V+VCKGPLDV+L
Sbjct: 472 PPKTLNIMNSSVADESKGYKLSLSYKGPMNIRVRLDHADPWIWCDAKVVHVCKGPLDVAL 531
Query: 527 LQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
LQL ++PDQL P DF SLGS AYVIGHGLFGPRCG
Sbjct: 532 LQLEHVPDQLFPTKVDFECSSLGSKAYVIGHGLFGPRCG 570
>gi|224125536|ref|XP_002329829.1| predicted protein [Populus trichocarpa]
gi|222870891|gb|EEF08022.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/577 (63%), Positives = 434/577 (75%), Gaps = 42/577 (7%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
MGLPE+ + +RNF VLVR+QGPDPKGLKMR+HAFHQ+NSG TTLSASG+LLP + +D ++
Sbjct: 1 MGLPEIVDVARNFAVLVRIQGPDPKGLKMRKHAFHQFNSGNTTLSASGLLLPDTLYDAEL 60
Query: 61 AERNWGVN----GLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEK 116
A R G++VTVASVVEPFL ++R+ S+G PELI G+ +D +VEGKL K
Sbjct: 61 ANRILEAKSQGLGMVVTVASVVEPFLSSKHRE-GISQGPPELIPGAHVDVMVEGKLGLRK 119
Query: 117 EHEDV-DKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQ 175
+ + V DKG+P W++AQL+ LVD+PVSSLALQSL+EASSG +H WEVGWSLA + + Q
Sbjct: 120 DEDGVLDKGAPCWLSAQLIRLVDVPVSSLALQSLVEASSGSMDHGWEVGWSLASHESGPQ 179
Query: 176 PLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALT 235
P M E S +ESHR A SSN S+M + T+RVAILGV +LKDLPN +
Sbjct: 180 PFM-----DTEHGNASTVESHR-HARGGSSNPSIMGRLTTRVAILGVFLHLKDLPNFKIL 233
Query: 236 PLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGG 295
KRGD LLAVGSPFG+LSP+HFFNS+S+GS+ANCYPPRS+ SLLMAD RCLPGMEG
Sbjct: 234 ASRKRGDFLLAVGSPFGILSPVHFFNSLSVGSIANCYPPRSSDISLLMADFRCLPGMEGS 293
Query: 296 PVFGEHAHFVGILIRPLRQKS-GAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGN 354
PVFGE++ F+GILIRPLRQKS GAEIQLVIPWEAIATACSDLLLKEPQNAEK IH NK N
Sbjct: 294 PVFGENSDFIGILIRPLRQKSTGAEIQLVIPWEAIATACSDLLLKEPQNAEKGIHFNKEN 353
Query: 355 LNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLN 414
LNA H +S SPLP++KA+AS+CLITID+ VWASGVLLN
Sbjct: 354 LNA---------------------HHNSHRPSPLPVEKAMASICLITIDEAVWASGVLLN 392
Query: 415 DQGLILTNAHLLEPWRFGKTTVSGWRNGVS-----FQPEDSASSGHTGVDQYQKSQTLPP 469
DQGLILTNAHLLEPWRFGKTTV+G +G F P++ S ++ VD Y+KSQ LPP
Sbjct: 393 DQGLILTNAHLLEPWRFGKTTVNGREDGTKSEDLFFPPKE--FSRYSEVDGYRKSQRLPP 450
Query: 470 KMPKIVDSSV-DEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQ 528
K IVDS V DE + YKLS +G R IRVRLDH DPWIWCDAK+VYVCKGPLDV+LLQ
Sbjct: 451 KTMNIVDSLVADERKGYKLSLSYKGSRNIRVRLDHADPWIWCDAKVVYVCKGPLDVALLQ 510
Query: 529 LGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
L ++PDQLCP DF PSLGS AY+IGHGLFGPRCG
Sbjct: 511 LEHVPDQLCPTKVDFKSPSLGSKAYIIGHGLFGPRCG 547
>gi|359483482|ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal processing protease,
glyoxysomal-like [Vitis vinifera]
Length = 753
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/578 (60%), Positives = 417/578 (72%), Gaps = 26/578 (4%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
MGLPE+ +F+RNF V+VRVQGPDPKGLKMR+HAFH Y+SGKTTLSASGMLLP + D
Sbjct: 1 MGLPEIVDFARNFAVMVRVQGPDPKGLKMRKHAFHHYHSGKTTLSASGMLLPDTLSDISA 60
Query: 61 AERNWGVNG-----LIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSE 115
A ++ N L+V+VAS++EPFL Q+R+ + PELI G QID +VE E
Sbjct: 61 ACKHIHSNNDRNSMLVVSVASILEPFLSLQHRENISQGSHPELIHGVQIDVMVE-----E 115
Query: 116 KEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQ 175
E++DK +P W+ QL+ LVD+P SLA+QS++EASSG E W+VGWSLA Y S
Sbjct: 116 NNSEEIDKKAPHWLPVQLLALVDVPAFSLAVQSIIEASSGSREQGWDVGWSLASYTGDSH 175
Query: 176 PLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY-LKDLPNIAL 234
L+ ++T + + F + +SS+ SLM KST+R+A+LGVSS KDLPNIA+
Sbjct: 176 TLVDAIQTQVS------LAXFLHFMVGDSSHPSLMGKSTARIALLGVSSINSKDLPNIAI 229
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+P NKRGDLLLA+GSPFGVLSP+HFFNS+S+GS+ANCY P + RSLLMADIRCLPGMEG
Sbjct: 230 SPSNKRGDLLLAMGSPFGVLSPVHFFNSISVGSIANCYTPSPSRRSLLMADIRCLPGMEG 289
Query: 295 GPVFGEHAHFVGILIRPLRQKS-GAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKG 353
GPVF EHA +GIL RPLRQK+ GAEIQLVIPWEAIATAC DLL KE QN + H N+G
Sbjct: 290 GPVFNEHAQLIGILTRPLRQKTGGAEIQLVIPWEAIATACCDLLQKEVQNEGEMKHYNRG 349
Query: 354 NLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLP-IQKALASVCLITIDDGVWASGVL 412
NLNAVG LF+ H +G ++ D C PL I+KA+AS+CL+TIDDGVWASGV+
Sbjct: 350 NLNAVGKKYLFSGHDSDGPFNSMHQQPDC-CSPPLSLIEKAMASICLVTIDDGVWASGVV 408
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRNG----VSFQP-EDSASSGHTGVDQYQKSQTL 467
LN QGLILTNAHLLEPWRFGKT G R G + F P E+S G +QKSQ L
Sbjct: 409 LNSQGLILTNAHLLEPWRFGKTVARGGRCGAEPEIPFIPSEESVYCRDEGTYSHQKSQDL 468
Query: 468 PPKMPKIVDSSV-DEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSL 526
PK KI SSV D H YK SS RGHR IR+RLDH DP IWCDA++VYV KGPLD++L
Sbjct: 469 LPKTLKIAGSSVMDGHGGYKSSSTYRGHRNIRIRLDHTDPRIWCDARVVYVSKGPLDIAL 528
Query: 527 LQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRC 564
LQL ++P QLCPI DF PS GS AYVIGHGLFGPRC
Sbjct: 529 LQLEFVPGQLCPIIMDFACPSAGSKAYVIGHGLFGPRC 566
>gi|255536763|ref|XP_002509448.1| trypsin domain-containing protein, putative [Ricinus communis]
gi|223549347|gb|EEF50835.1| trypsin domain-containing protein, putative [Ricinus communis]
Length = 729
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 345/579 (59%), Positives = 414/579 (71%), Gaps = 45/579 (7%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
MG PE F+RNF V+VRV GPDPKGLKMR HAFH Y SGKTTLSASGM+LP + F + +
Sbjct: 1 MGFPETVNFARNFAVMVRVHGPDPKGLKMRNHAFHLYASGKTTLSASGMILPDTLFHSGL 60
Query: 61 AERNWGVNGL-------IVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLR 113
++ G NGL +VTVASVVE FL Q R+ E ++ + EG L
Sbjct: 61 VKQILGSNGLEGQVLVLVVTVASVVESFLSLQQRESMYQERW-------GMERVAEGSL- 112
Query: 114 SEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNS 173
DKG+ W TA+L+ LVD+ SSLALQSL+E+S G +H WE+GWSLA ++N
Sbjct: 113 --------DKGTSYWHTARLIRLVDVAESSLALQSLVESSLGSLDHGWEIGWSLASHDNG 164
Query: 174 SQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIA 233
+ M V++T + ++ ES N +L+SK+++R+A+LGVS LKDLP I
Sbjct: 165 HRNSMDVIQTQVSKAQVG-----------ESGNPTLVSKTSTRIALLGVSLNLKDLPIIT 213
Query: 234 LTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGME 293
++P RGD LL VGSPFGVLSP+HFFNS+SMGSVANCYP RS+ SL+MADIRCLPGME
Sbjct: 214 ISPSIIRGDSLLTVGSPFGVLSPVHFFNSLSMGSVANCYPARSSNVSLVMADIRCLPGME 273
Query: 294 GGPVFGEHAHFVGILIRPLRQKS-GAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINK 352
G P FGE F+GIL RPLRQKS GAEIQLVIPWEAIATAC DLLLKEPQNAE+ I INK
Sbjct: 274 GAPAFGECGDFIGILTRPLRQKSTGAEIQLVIPWEAIATACGDLLLKEPQNAEEGIAINK 333
Query: 353 GNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVL 412
NLNAV N+ SH +G YKYEH +S C S LP++K +ASVCLITID+G+WASGVL
Sbjct: 334 ENLNAVENAY---SHESDGPFSYKYEHFNSHCSSTLPVEKVMASVCLITIDEGIWASGVL 390
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRN-----GVSFQPEDSASSGHTGVDQYQKSQTL 467
LNDQGL+LTNAHLLEPWRFGKTT++G RN + PE S GH+ VD Y+ SQ +
Sbjct: 391 LNDQGLVLTNAHLLEPWRFGKTTINGGRNRTKSGALFLPPEGSVIPGHSNVDSYRGSQ-M 449
Query: 468 PPKMPKIVDSSV-DEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSL 526
P KI+DSSV D+ + +LS GHR IRVRLDH +PWIWCDAK++YV KGPLDV+L
Sbjct: 450 PLNKAKIMDSSVFDQTKGDQLSLSYSGHRNIRVRLDHFNPWIWCDAKVIYVSKGPLDVAL 509
Query: 527 LQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
LQL Y+PDQLCPI AD+ P LGS AYVIGHGLFGPRCG
Sbjct: 510 LQLEYVPDQLCPIKADYACPILGSKAYVIGHGLFGPRCG 548
>gi|297740411|emb|CBI30593.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 319/572 (55%), Positives = 386/572 (67%), Gaps = 85/572 (14%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
MGLPE+ +F+RNF V+VRVQGPDPKGLKMR+HAFH Y+SGKTTLSASGMLLP + D
Sbjct: 1 MGLPEIVDFARNFAVMVRVQGPDPKGLKMRKHAFHHYHSGKTTLSASGMLLPDTLSDISA 60
Query: 61 AERNWGVNG-----LIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSE 115
A ++ N L+V+VAS++EPFL Q+R+ + PELI G QID +VE E
Sbjct: 61 ACKHIHSNNDRNSMLVVSVASILEPFLSLQHRENISQGSHPELIHGVQIDVMVE-----E 115
Query: 116 KEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQ 175
E++DK +P W+ QL+ LVD+P SLA+QS++EASSG E W+VGWSLA Y S
Sbjct: 116 NNSEEIDKKAPHWLPVQLLALVDVPAFSLAVQSIIEASSGSREQGWDVGWSLASYTGDSH 175
Query: 176 PLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY-LKDLPNIAL 234
L+ ++T ++ N S +E R F + +SS+ SLM KST+R+A+LGVSS KDLPNIA+
Sbjct: 176 TLVDAIQTQVDCNAKSSIEGQRHFMVGDSSHPSLMGKSTARIALLGVSSINSKDLPNIAI 235
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+P NKRGDLLLA+GSPFGVLSP+HFFNS+S+GS+ANCY P + RSLLMADIRCLPGMEG
Sbjct: 236 SPSNKRGDLLLAMGSPFGVLSPVHFFNSISVGSIANCYTPSPSRRSLLMADIRCLPGMEG 295
Query: 295 GPVFGEHAHFVGILIRPLRQKS-GAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKG 353
GPVF EHA +GIL RPLRQK+ GAEIQLVIPWEAIATAC DLL KE QN + H N+G
Sbjct: 296 GPVFNEHAQLIGILTRPLRQKTGGAEIQLVIPWEAIATACCDLLQKEVQNEGEMKHYNRG 355
Query: 354 NLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLP-IQKALASVCLITIDDGVWASGVL 412
NLNA + C PL I+KA+AS+CL+TIDDGVWASGV+
Sbjct: 356 NLNAQPDC----------------------CSPPLSLIEKAMASICLVTIDDGVWASGVV 393
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKMP 472
LN QGLILTNAHLLEPWRFGKT+
Sbjct: 394 LNSQGLILTNAHLLEPWRFGKTS------------------------------------- 416
Query: 473 KIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYI 532
+ Y+ GHR IR+RLDH DP IWCDA++VYV KGPLD++LLQL ++
Sbjct: 417 -------QDFSTYR------GHRNIRIRLDHTDPRIWCDARVVYVSKGPLDIALLQLEFV 463
Query: 533 PDQLCPIDADFGQPSLGSAAYVIGHGLFGPRC 564
P QLCPI DF PS GS AYVIGHGLFGPRC
Sbjct: 464 PGQLCPIIMDFACPSAGSKAYVIGHGLFGPRC 495
>gi|356546634|ref|XP_003541729.1| PREDICTED: glyoxysomal processing protease, glyoxysomal-like
[Glycine max]
Length = 749
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/574 (56%), Positives = 397/574 (69%), Gaps = 26/574 (4%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
M L + F+RNF V+VRV+GPDPKGLKMR HAFHQY SG+TTLSASG+L+P + D++V
Sbjct: 13 MVLSDAVNFARNFAVMVRVRGPDPKGLKMRNHAFHQYRSGETTLSASGVLVPDTLCDSQV 72
Query: 61 AERNWGVN----GLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEK 116
A R G N L+VTVASVVEPFL PQ RD + +G+P+LI G QID + +E+
Sbjct: 73 ATRLNGDNCEDRVLVVTVASVVEPFLSPQQRD-NIPQGRPDLIAGVQIDVM------TEE 125
Query: 117 EHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQP 176
+E ++G+P W+ AQL+ LVDIP SS LQSL+EAS GLPEHEWEVGWSLA YNN SQP
Sbjct: 126 TNEKSNRGTPCWLLAQLLSLVDIPASSNCLQSLIEASLGLPEHEWEVGWSLASYNNDSQP 185
Query: 177 LMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTP 236
+T A S + SL+ KS +R+AIL VS +DL + ++
Sbjct: 186 SKDFFQT----------HPRERLAAGGSGSASLVYKSLTRMAILSVSLSFRDLLDSKVSA 235
Query: 237 LNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
+NKRGD LLAVGSPFGVLSPMHFFNS+S+G +ANCYPP S+ SLLMADIRCLPGMEG P
Sbjct: 236 MNKRGDFLLAVGSPFGVLSPMHFFNSISVGCIANCYPPHSSDGSLLMADIRCLPGMEGSP 295
Query: 297 VFGEHAHFVGILIRPLRQKS-GAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNL 355
VF EHA +G+LIRP RQK+ GAEIQLVIPW+AI TA S LL K PQN +K + +GNL
Sbjct: 296 VFSEHACLIGVLIRPFRQKAYGAEIQLVIPWDAIVTASSGLLHKRPQNTQKGLCNQEGNL 355
Query: 356 NAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLND 415
A G+ ++ L+ K+EH+ SPLPI+KA+ SVCL+TI DGVWASGVLLN
Sbjct: 356 YAAGSVPFSDTDKLDVCSRNKHEHLYFGSSSPLPIEKAMTSVCLVTIGDGVWASGVLLNS 415
Query: 416 QGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGH----TGVDQYQKSQTLPPKM 471
QGLILTNAHLLEPWRFGK V+G G + + S G V+ Q SQT P KM
Sbjct: 416 QGLILTNAHLLEPWRFGKEHVNGGGYGTNSEKISSMLEGTAYVVNRVESNQVSQTSPLKM 475
Query: 472 PKIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGY 531
P + + +E YK S HR IRVRLDH+ W+WCDAK+VYVCKGP DV+LLQL
Sbjct: 476 PILYPFAANEQGGYKSSPTYDNHRNIRVRLDHIKSWVWCDAKVVYVCKGPWDVALLQLES 535
Query: 532 IPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
+PD L PI +F +PS GS A+VIGHGLFGP+ G
Sbjct: 536 VPDDLLPITMNFSRPSTGSQAFVIGHGLFGPKHG 569
>gi|111183165|gb|ABH07902.1| putative protease/hydrolase [Solanum lycopersicum]
Length = 753
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 297/578 (51%), Positives = 400/578 (69%), Gaps = 20/578 (3%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
MGLPE+ + +RN+ V+VR+QGPDPKGLKMR+HAFH YNSGKTTLSASGMLLP SF + V
Sbjct: 1 MGLPEVVDVARNYAVMVRIQGPDPKGLKMRKHAFHLYNSGKTTLSASGMLLPSSFVNGSV 60
Query: 61 AERNWG------VNG--LIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKL 112
+E+ G + G L++TVASV+EPF++ Q D S+ +P+LI G+QID L EG++
Sbjct: 61 SEQIQGESKLQSIGGHLLVLTVASVIEPFVV-QQDTSDISKDKPKLIPGAQIDILREGEI 119
Query: 113 RSEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNN 172
+ + + ++ K W+ A+L+ +VDIPVSS A+QSL+E SS EH WEVGWSLA Y N
Sbjct: 120 KLQNDLKESSKEGLNWLPAELLRVVDIPVSSAAVQSLIEGSSSSIEHGWEVGWSLAAYGN 179
Query: 173 SSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGV-SSYLKDLPN 231
+ Q + + +E S P +SS S++ ST+R+A+L V S+ +D P
Sbjct: 180 AHQSFINTKRRQVEQMS---FPSQTPTVEAQSSLPSVIGTSTTRIALLRVPSNPYEDPPP 236
Query: 232 IALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
+ ++P ++RGDLLLA+GSPFG+LSP HF NS+S+G++AN YPP S ++LL+ADIRCLPG
Sbjct: 237 LKVSPWSRRGDLLLAMGSPFGILSPSHFSNSISVGTIANSYPPNSLNKALLIADIRCLPG 296
Query: 292 MEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
MEG PV GEHA +G+L RPLRQK + AEIQ+VIPWEAI +AC+ L +E Q K IH
Sbjct: 297 MEGSPVLGEHAELIGVLSRPLRQKATAAEIQMVIPWEAITSACASYLQEERQTGRK-IHF 355
Query: 351 NKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASG 410
N GNL +V NS I +G Y EH+ + P I+KA+ S+CLIT+DDG WASG
Sbjct: 356 NNGNLISVKKESSSNS-IQDGPINYTQEHLLTGSVPPSLIEKAMTSICLITVDDGAWASG 414
Query: 411 VLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQY---QKSQTL 467
VLLN QGL+LTNAHLLEPWRFGKT+V+G+ S S H G D++ +++ L
Sbjct: 415 VLLNKQGLLLTNAHLLEPWRFGKTSVNGYNTKSDVVFTTSNQSEHPGDDKFTIHHRNKYL 474
Query: 468 PPKMPKIVDSSV-DEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSL 526
K K V +E +++++ + R IRVRLD +DPW+W +A++V+V +GPLDV+L
Sbjct: 475 LQKELKTPQFLVNNEQGSFRVNLANTSSRTIRVRLDFMDPWVWTNAEVVHVSRGPLDVAL 534
Query: 527 LQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRC 564
LQL +PD+LCPI DF +PS GS AY++GHGLFGPRC
Sbjct: 535 LQLQLVPDELCPITVDFMRPSPGSKAYILGHGLFGPRC 572
>gi|357446685|ref|XP_003593618.1| Peroxisomal leader peptide-processing protease [Medicago
truncatula]
gi|355482666|gb|AES63869.1| Peroxisomal leader peptide-processing protease [Medicago
truncatula]
Length = 819
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 320/635 (50%), Positives = 400/635 (62%), Gaps = 81/635 (12%)
Query: 5 EMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKVAERN 64
E+ F+RNF V+V+++GPDPKG+KMR+HAFH Y SG+TTLSASG+L+P +F D +VA+
Sbjct: 5 EIFNFARNFSVMVKIRGPDPKGMKMRKHAFHHYRSGETTLSASGLLVPEAFCDAQVAKGL 64
Query: 65 WGVN----GLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEKEHED 120
+G N L+VTVASVVEPFL PQ+R ++ + +P+LI+G +ID + +EK +E+
Sbjct: 65 YGDNFEGRVLVVTVASVVEPFLSPQHR-QNIPQSRPDLISGVRIDIM------TEKTNEE 117
Query: 121 VDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAP----------- 169
D+G+P W+ QL+ LVDIP S+L +QSL+EAS GL EHEW+VGWSLA
Sbjct: 118 SDQGTPCWLEGQLLSLVDIPASALCVQSLVEASLGLSEHEWDVGWSLASHNNDSQSSKDN 177
Query: 170 -------YNNSSQPLM------------------------------------GVVKTSIE 186
YN +S+P++ GV+ S
Sbjct: 178 FQTQAPNYNMASEPILDLSLGFPHRPRFRPVGPGRSQSCRTIKCSVVLCVLCGVLNCSCV 237
Query: 187 SNKISL------MESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKR 240
+ SL R A+ ES + SLM KS +R+AIL +SS KD N + NKR
Sbjct: 238 IYRRSLGVWANSWSVKRRLALGESGSASLMCKSLTRMAILSISSSFKDSLNYDKSSTNKR 297
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLM-ADIRCLPGMEGGPVFG 299
GD LLAVGSPFG+LSP HFFNS+S+G +ANCYPP S+ SLLM ADIR LPGMEG PVF
Sbjct: 298 GDFLLAVGSPFGILSPTHFFNSLSVGCIANCYPPNSSDGSLLMMADIRSLPGMEGSPVFS 357
Query: 300 EHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAV 358
EHA G+LIRPLRQ+ SGAEIQLVIPWEAI A S LL K PQN + +GN
Sbjct: 358 EHACLTGVLIRPLRQQTSGAEIQLVIPWEAIVNAASGLLRKWPQNTVEGSCYQEGNSCGP 417
Query: 359 GNS--LLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQ 416
G + +N +EH++ SPLPI+KA+ASVCL+TI DGVWASG+LLN Q
Sbjct: 418 GKGPFIDYNKSEAYVLSSNNHEHLNFGNSSPLPIEKAMASVCLVTIGDGVWASGILLNSQ 477
Query: 417 GLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSAS--SGHTGVDQ----YQKSQTLPPK 470
GLILTNAHLLEPWRFGKT ++G G PE S G T +D Q QTLP K
Sbjct: 478 GLILTNAHLLEPWRFGKTHITGRGYGNGTNPEKFPSMLEGTTSLDNRGESIQTRQTLPSK 537
Query: 471 MPKIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLG 530
M + E YKL+ HR IR+RLDH+ PW+WCDAK+VYVCKGP DV+LLQL
Sbjct: 538 MTNLYPFVAGEQGRYKLNKPYDSHRNIRIRLDHIKPWVWCDAKVVYVCKGPWDVALLQLE 597
Query: 531 YIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
+PD L PI +F +PS GS AYVIGHGLFGP+CG
Sbjct: 598 PVPDNLLPILTNFSRPSTGSKAYVIGHGLFGPKCG 632
>gi|297851284|ref|XP_002893523.1| hypothetical protein ARALYDRAFT_473044 [Arabidopsis lyrata subsp.
lyrata]
gi|297339365|gb|EFH69782.1| hypothetical protein ARALYDRAFT_473044 [Arabidopsis lyrata subsp.
lyrata]
Length = 713
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 293/578 (50%), Positives = 378/578 (65%), Gaps = 54/578 (9%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFD--- 57
M + ++ FSRNF VLV+V+GPDPKGLKMR+HAFHQY+SG TLSASG+L P +
Sbjct: 1 MDVSKVVSFSRNFAVLVKVEGPDPKGLKMRKHAFHQYHSGNATLSASGILFPRNILSGGE 60
Query: 58 --TKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQP-ELITGSQIDFLVEGKLRS 114
KV L++TVASVVEPFL +R + P +LI G++I+ +VEG+L+S
Sbjct: 61 VTAKVLFEAGQEMALVLTVASVVEPFLTLGHRTSSSISQDPVKLIPGARIEIMVEGQLKS 120
Query: 115 EKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSS 174
+E +P WV AQL+ LVD+PVSS ALQSL+EASSG + W+VGWSL N S
Sbjct: 121 GEE-------APFWVPAQLLSLVDVPVSSAALQSLIEASSGSKDSGWDVGWSLVSAANGS 173
Query: 175 QPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL 234
QP T IE LM+ ++E N + M+KS +R+A+LGV L PN+
Sbjct: 174 QP-----STKIEHYSKPLMQ------LDEPLNANFMAKSATRMALLGVPLSLLGQPNMKF 222
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+ +GD L+A+GSPFG+LSP++FFNSVS GS+ANCYP S +SL++AD+RCLPGMEG
Sbjct: 223 ASSSSKGDTLVALGSPFGILSPVNFFNSVSTGSIANCYPSGSLKKSLMIADVRCLPGMEG 282
Query: 295 GPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKG 353
PVF ++ H +GILIRPLRQK SG EIQLV+PW AI TACS LLL+EP A
Sbjct: 283 APVFDKNGHLIGILIRPLRQKNSGVEIQLVVPWGAITTACSHLLLEEPSEA--------- 333
Query: 354 NLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLL 413
G + + S LN D+ + + I+KA+ SVCLIT++DGVWASG++L
Sbjct: 334 -----GKASKWGSEALNVKS-------DTSIPAQVAIEKAMESVCLITVNDGVWASGIIL 381
Query: 414 NDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQP-----EDSASSGHTGVDQYQKSQTLP 468
N+ GLILTNAHLLEPWR+GK V G N +P ++ +S+G G QKSQTLP
Sbjct: 382 NEHGLILTNAHLLEPWRYGKGGVYGEGNDAGLKPYVLGADEFSSTG--GKVWEQKSQTLP 439
Query: 469 PKMPKIVDSSVDEH-RAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
K P + S+V E+ R YK + GHR IRVRL HLD W WC A +VY+CK LD++LL
Sbjct: 440 RKAPANLYSAVGENIREYKHNFLQTGHRDIRVRLCHLDSWTWCTANVVYICKEQLDIALL 499
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
QL Y+P +L PI A+F P LG+ A+V+GHGLFGPRCG
Sbjct: 500 QLEYVPGKLQPIAANFSSPPLGTTAHVVGHGLFGPRCG 537
>gi|18086453|gb|AAL57680.1| At1g28320/F3H9_2 [Arabidopsis thaliana]
Length = 709
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/578 (51%), Positives = 382/578 (66%), Gaps = 58/578 (10%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS-FFDTK 59
M + ++ FSRNF VLV+V+GPDPKGLKMR+HAFHQY+SG TLSASG+LLP F +
Sbjct: 1 MDVSKVVSFSRNFAVLVKVEGPDPKGLKMRKHAFHQYHSGNATLSASGILLPRDIFLSGE 60
Query: 60 VAERNWGVNG----LIVTVASVVEPFLLPQYRDKDTSEGQP-ELITGSQIDFLVEGKLRS 114
VA + G L++TVASVVEPFL +R + P +LI G+ I+ +VEG+L+S
Sbjct: 61 VAAKVLFEAGQDMALVLTVASVVEPFLTLGHRTSSSISQDPVKLIPGAMIEIMVEGQLKS 120
Query: 115 EKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSS 174
EKE SP WV AQL+ LVD+PVSS ALQSL+EASSG + W++GWSL N S
Sbjct: 121 EKE-------SPFWVPAQLLSLVDVPVSSAALQSLIEASSGSKDSGWDIGWSLVSAANGS 173
Query: 175 QPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL 234
QP +IE LM+ ++E N + M+KS +R+AILGV L P++
Sbjct: 174 QP-----SINIEHYSKPLMQ------LDEPHNANFMAKSATRMAILGVPLSLLGQPSMNF 222
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+ +GD L+A+GSPFG+LSP++FFNSVS GS+AN YP S +SL++AD+RCLPGMEG
Sbjct: 223 ASSSSKGDTLVALGSPFGILSPVNFFNSVSTGSIANSYPSGSLKKSLMIADVRCLPGMEG 282
Query: 295 GPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKG 353
PVF ++ H +GILIRPLRQK SG EIQLV+PW AI TACS LLL+EP
Sbjct: 283 APVFAKNGHLIGILIRPLRQKNSGVEIQLVVPWGAITTACSHLLLEEP------------ 330
Query: 354 NLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLL 413
+ G + + S +L+ D+ + + I+KA+ SVCLIT++DGVWASG++L
Sbjct: 331 --SVEGKASQWGSEVLSVKS-------DASIPAQVAIEKAMESVCLITVNDGVWASGIIL 381
Query: 414 NDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQP-----EDSASSGHTGVDQYQKSQTLP 468
N+ GLILTNAHLLEPWR+GK G G F+P E+ +S+G + QKSQTLP
Sbjct: 382 NEHGLILTNAHLLEPWRYGK----GGVYGEGFKPYVLGAEEFSSTGSKFWE--QKSQTLP 435
Query: 469 PKMPKIVDSSVDEH-RAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
K P+ SSV E+ R YK + GHR IRVRL HLD W WC A +VY+CK LD++LL
Sbjct: 436 RKAPRNHYSSVGENIREYKHNFLQTGHRDIRVRLCHLDSWTWCPANVVYICKEQLDIALL 495
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
QL Y+P +L PI A+F P LG+ A+V+GHGLFGPRCG
Sbjct: 496 QLEYVPGKLQPITANFSSPPLGTTAHVVGHGLFGPRCG 533
>gi|22329831|ref|NP_174153.2| protease DEG15 [Arabidopsis thaliana]
gi|332278177|sp|Q8VZD4.2|DEG15_ARATH RecName: Full=Glyoxysomal processing protease, glyoxysomal;
Short=AtDEG15; AltName: Full=DEG-protease
gi|332192831|gb|AEE30952.1| protease DEG15 [Arabidopsis thaliana]
Length = 709
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 294/578 (50%), Positives = 382/578 (66%), Gaps = 58/578 (10%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS-FFDTK 59
M + ++ FSRNF VLV+V+GPDPKGLKMR+HAFHQY+SG TLSASG+LLP F +
Sbjct: 1 MDVSKVVSFSRNFAVLVKVEGPDPKGLKMRKHAFHQYHSGNATLSASGILLPRDIFLSGE 60
Query: 60 VAERNWGVNG----LIVTVASVVEPFLLPQYRDKDTSEGQP-ELITGSQIDFLVEGKLRS 114
VA + G L++TVASVVEPFL +R + P +LI G+ I+ +VEG+L+S
Sbjct: 61 VAAKVLFEAGQDMALVLTVASVVEPFLTLGHRTSSSISQDPVKLIPGAMIEIMVEGQLKS 120
Query: 115 EKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSS 174
EKE +P WV AQL+ LVD+PVSS ALQSL+EASSG + W++GWSL N S
Sbjct: 121 EKE-------APFWVPAQLLSLVDVPVSSAALQSLIEASSGSKDSGWDIGWSLVSAANGS 173
Query: 175 QPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL 234
QP +IE LM+ ++E N + M+KS +R+AILGV L P++
Sbjct: 174 QP-----SINIEHYSKPLMQ------LDEPHNANFMAKSATRMAILGVPLSLLGQPSMNF 222
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+ +GD L+A+GSPFG+LSP++FFNSVS GS+AN YP S +SL++AD+RCLPGMEG
Sbjct: 223 ASSSSKGDTLVALGSPFGILSPVNFFNSVSTGSIANSYPSGSLKKSLMIADVRCLPGMEG 282
Query: 295 GPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKG 353
PVF ++ H +GILIRPLRQK SG EIQLV+PW AI TACS LLL+EP
Sbjct: 283 APVFAKNGHLIGILIRPLRQKNSGVEIQLVVPWGAITTACSHLLLEEP------------ 330
Query: 354 NLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLL 413
+ G + + S +L+ D+ + + I+KA+ SVCLIT++DGVWASG++L
Sbjct: 331 --SVEGKASQWGSEVLSVKS-------DASIPAQVAIEKAMESVCLITVNDGVWASGIIL 381
Query: 414 NDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQP-----EDSASSGHTGVDQYQKSQTLP 468
N+ GLILTNAHLLEPWR+GK G G F+P E+ +S+G + QKSQTLP
Sbjct: 382 NEHGLILTNAHLLEPWRYGK----GGVYGEGFKPYVLGAEEFSSTGSKFWE--QKSQTLP 435
Query: 469 PKMPKIVDSSVDEH-RAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
K P+ SSV E+ R YK + GHR IRVRL HLD W WC A +VY+CK LD++LL
Sbjct: 436 RKAPRNHYSSVGENIREYKHNFLQTGHRDIRVRLCHLDSWTWCPANVVYICKEQLDIALL 495
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
QL Y+P +L PI A+F P LG+ A+V+GHGLFGPRCG
Sbjct: 496 QLEYVPGKLQPITANFSSPPLGTTAHVVGHGLFGPRCG 533
>gi|449479590|ref|XP_004155645.1| PREDICTED: glyoxysomal processing protease, glyoxysomal-like
[Cucumis sativus]
Length = 747
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/581 (50%), Positives = 383/581 (65%), Gaps = 31/581 (5%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
M E+ + +RNF ++VRVQGPDPKGLKM++HAFHQY+SG+TTLSASGM+LP + +DT+
Sbjct: 1 MAKREIVDHARNFAIMVRVQGPDPKGLKMQKHAFHQYHSGRTTLSASGMILPETLYDTRA 60
Query: 61 AER--NWG--VNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEK 116
A+ N+ L++TV+S+ EPF+ Q+RDK +G+PELI G QID +VEG R
Sbjct: 61 AKHLGNYKDQFATLVLTVSSIFEPFMPLQHRDK-IHKGKPELIPGVQIDIMVEGISRDS- 118
Query: 117 EHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQP 176
DV K +P W A L+ L DIP S+ ALQS+M+AS WEVGWSLA Y N S
Sbjct: 119 ---DVSK-TPHWHAAHLLALYDIPTSATALQSVMDASIDSLHQRWEVGWSLASYTNGSPS 174
Query: 177 LMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTP 236
++ IE+ K + + S + +E SS + + T R+AILGV S KD+PNI+++P
Sbjct: 175 FRDSLRGQIENEKRTSVGSQKFLDLEGSSKNNDL---TIRIAILGVPSLSKDMPNISISP 231
Query: 237 LNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
+RG LLAVGSPFGVLSP+HF NS+S+GS++NCYPP S ++SLLMAD+RCLPGMEG P
Sbjct: 232 SRQRGSFLLAVGSPFGVLSPVHFLNSLSVGSISNCYPPSSLSKSLLMADMRCLPGMEGCP 291
Query: 297 VFGEHAHFVGILIRPL-RQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNL 355
VF E A +G+LIRPL +GAEIQL+IPW AIATACS LLL E+ + N+ +
Sbjct: 292 VFDEKARLIGVLIRPLVHYMTGAEIQLLIPWGAIATACSGLLLGTCNVGERIDNDNRC-I 350
Query: 356 NAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLP--IQKALASVCLITIDDGVWASGVLL 413
AVGN + L G E S C P P I+KA+ASVCL+T+ +G+WASGVLL
Sbjct: 351 GAVGNMAVNKEQKLEGGFSSIQE--SSGCSRPFPFKIEKAVASVCLVTMGEGIWASGVLL 408
Query: 414 NDQGLILTNAHLLEPWRFGKTTVSGWR---NGVSFQ--PEDSASSGHTGVDQYQKSQTLP 468
N QGLILTNAHL+EPWRFGKT V G + N Q E S S + V Q+ +
Sbjct: 409 NSQGLILTNAHLIEPWRFGKTNVGGEKSIENAKLLQSHTEHSPCSMNNSVFGGQEIGNIE 468
Query: 469 PKMPK----IVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDV 524
P K ++ + ++++ KLS + G R + VRL H +PWIWCDAK++Y+CKG DV
Sbjct: 469 PNASKNGNILLHNQLEDN---KLSFPNYGRRNLHVRLSHAEPWIWCDAKLLYICKGSWDV 525
Query: 525 SLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
+LLQL IP+QL PI D P+ GS +VIGHGL GP+ G
Sbjct: 526 ALLQLEQIPEQLSPITMDCSCPTSGSKIHVIGHGLLGPKSG 566
>gi|147774460|emb|CAN59793.1| hypothetical protein VITISV_001901 [Vitis vinifera]
Length = 840
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/569 (51%), Positives = 359/569 (63%), Gaps = 77/569 (13%)
Query: 39 SGKTTLSASGMLLPLSFFDTKVAERNWGVNG-----LIVTVASVVEPFLLPQYRDKDTSE 93
SGKTTLSASGMLLP + D A ++ N L+V+VAS++EPFL Q+R+ +
Sbjct: 115 SGKTTLSASGMLLPDTLSDISAACKHIHSNNDRNSMLVVSVASILEPFLSLQHRENISQG 174
Query: 94 GQPELITGSQIDFLVEGKLRSEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEAS 153
PELI G QID +VE E E++DK +P W+ QL+ LVD+P SLA+QS++EAS
Sbjct: 175 SHPELIHGVQIDVMVE-----ENNSEEIDKKAPHWLPVQLLALVDVPAFSLAVQSIIEAS 229
Query: 154 SGLPEHEWEVGWSLAPYNNSSQPLMGVVKTS------------------------IESNK 189
SG E W+VGWSLA Y S L+ ++T ++ N
Sbjct: 230 SGSREQGWDVGWSLASYTGDSHTLVDAIQTQRTNQSFLAARQLYCKSTFVNEGKKVDCNA 289
Query: 190 ISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY-LKDLPNIALTPLNKRGDLLLAVG 248
S +E R F + +SS+ SLM KST+R+A+LGVSS KDLPNIA++P NKRGDLLLA+G
Sbjct: 290 KSSIEGQRHFMVGDSSHPSLMGKSTARIALLGVSSINSKDLPNIAISPSNKRGDLLLAMG 349
Query: 249 SPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD-----IRCLPGMEGGPVFGEHAH 303
SPFGVLSP+HFFN RS+ L++ D L GMEGGPVF EHA
Sbjct: 350 SPFGVLSPVHFFN-------------RSSLVHLVLLDSDSILTLYLSGMEGGPVFNEHAQ 396
Query: 304 FVGILIRPLRQKSG-AEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSL 362
+GIL RPLRQK+G AEIQLVIPWEAI TAC DLL KE QN + H N+GNLNAVG
Sbjct: 397 LIGILTRPLRQKTGGAEIQLVIPWEAIXTACCDLLQKEVQNEGEMKHYNRGNLNAVGKKY 456
Query: 363 LFNSHILNGACCYKYEHVDSRCRSPLP-IQKALASVCLITIDDGVWASGVLLNDQGLILT 421
LF+ H +G ++ D C PL I+KA+AS+CL+TIDDGVWASGV+LN QGLILT
Sbjct: 457 LFSGHDSDGPFNSMHQQPDC-CSPPLSLIEKAMASICLVTIDDGVWASGVVLNSQGLILT 515
Query: 422 NAHLLEPWRFGKTTVSGWRNG----VSFQP-EDSASSGHTGVDQYQKSQTLPPKMPKIVD 476
NAHLLEPWRFGKT G R G + F P E+S G +QKS P
Sbjct: 516 NAHLLEPWRFGKTVARGGRCGAEPEIPFIPSEESVYCRDEGTYSHQKS-------PGFAT 568
Query: 477 SSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQL 536
++++ RGHR IR+RLDH DP IWCDA++VYV KGPLD++LLQL ++P QL
Sbjct: 569 KNIED---------CRGHRNIRIRLDHTDPRIWCDARVVYVSKGPLDIALLQLEFVPGQL 619
Query: 537 CPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
CPI DF PS GS AYVIGHGLFGPRC
Sbjct: 620 CPIIMDFACPSAGSKAYVIGHGLFGPRCA 648
>gi|449434336|ref|XP_004134952.1| PREDICTED: glyoxysomal processing protease, glyoxysomal-like
[Cucumis sativus]
Length = 713
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 279/586 (47%), Positives = 362/586 (61%), Gaps = 75/586 (12%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKV 60
M E+ + +RNF ++VRVQGPDPKGLKM++HAFHQY+SG+TTLSASGM+LP + +DT+
Sbjct: 1 MAKREIVDHARNFAIMVRVQGPDPKGLKMQKHAFHQYHSGRTTLSASGMILPETLYDTRA 60
Query: 61 AER--NWG--VNGLIVTVASVVEPFLLPQYRDKDTS-----EGQPELITGSQIDFLVEGK 111
A+ N+ L++TV+S+ EPF+ Q+RDK +G+PELI G QID +VEG
Sbjct: 61 AKHLGNYKDQFATLVLTVSSIFEPFMPLQHRDKIHKPFYELQGKPELIPGVQIDIMVEGI 120
Query: 112 LRSEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYN 171
R DV K +P W A L+ L DIP S+ ALQS+M+AS WEVGWSLA Y
Sbjct: 121 SRD----SDVSK-TPHWHAAHLLALYDIPTSATALQSVMDASIDSLHQRWEVGWSLASYT 175
Query: 172 NSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPN 231
N S R ++ G +D+PN
Sbjct: 176 NGSPSF--------------------------------------RDSLRG-----QDMPN 192
Query: 232 IALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
I+++P +RG LLAVGSPFGVLSP+HF NS+S+GS++NCYPP S ++SLLMAD+RCLPG
Sbjct: 193 ISISPSRQRGSFLLAVGSPFGVLSPVHFLNSLSVGSISNCYPPSSLSKSLLMADMRCLPG 252
Query: 292 MEGGPVFGEHAHFVGILIRPL-RQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
MEG PVF E A +G+LIRPL +GAEIQL+IPW AIATACS LLL E+ +
Sbjct: 253 MEGCPVFDEKARLIGVLIRPLVHYMTGAEIQLLIPWGAIATACSGLLLGTCNVGERIDND 312
Query: 351 NKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLP--IQKALASVCLITIDDGVWA 408
N+ + AVGN + L G E S C P P I+KA+ASVCL+T+ +G+WA
Sbjct: 313 NRC-IGAVGNMAVNKEQKLEGGFSSIQE--SSGCSRPFPFKIEKAVASVCLVTMGEGIWA 369
Query: 409 SGVLLNDQGLILTNAHLLEPWRFGKTTVSGWR---NGVSFQ--PEDSASSGHTGVDQYQK 463
SGVLLN QGLILTNAHL+EPWRFGKT V G + N Q E S S + V Q+
Sbjct: 370 SGVLLNSQGLILTNAHLIEPWRFGKTNVGGEKSIENAKLLQSHTEHSPCSMNNSVFGGQE 429
Query: 464 SQTLPPKMPK----IVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCK 519
+ P K ++ + ++++ KLS + G R + VRL H +PWIWCDAK++Y+CK
Sbjct: 430 IGNIEPNASKNGNILLHNQLEDN---KLSFPNYGRRNLHVRLSHAEPWIWCDAKLLYICK 486
Query: 520 GPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
G DV+LLQL IP+QL PI D P+ GS +VIGHGL GP+ G
Sbjct: 487 GSWDVALLQLEQIPEQLSPITMDCSCPTSGSKIHVIGHGLLGPKSG 532
>gi|9795605|gb|AAF98423.1|AC021044_2 Unknown protein [Arabidopsis thaliana]
Length = 688
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 270/579 (46%), Positives = 357/579 (61%), Gaps = 81/579 (13%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS-FFDTK 59
M + ++ FSRNF VLV+V+GP L + S+SG+LLP F +
Sbjct: 1 MDVSKVVSFSRNFAVLVKVEGPVSPDLSLPN-------------SSSGILLPRDIFLSGE 47
Query: 60 VAERNWGVNG----LIVTVASVVEPFLLPQYRDKDTSEGQP-ELITGSQIDFLVEGKLRS 114
VA + G L++TVASVVEPFL +R + P +LI G+ I+ +VEG+L+S
Sbjct: 48 VAAKVLFEAGQDMALVLTVASVVEPFLTLGHRTSSSISQDPVKLIPGAMIEIMVEGQLKS 107
Query: 115 EKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSS 174
EKE +P WV AQL+ LVD+PVSS ALQSL+EASSG + W++GWSL N S
Sbjct: 108 EKE-------APFWVPAQLLSLVDVPVSSAALQSLIEASSGSKDSGWDIGWSLVSAANGS 160
Query: 175 QPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL 234
QP +IE LM+ ++E N + M+KS +R+AILGV L P++
Sbjct: 161 QP-----SINIEHYSKPLMQ------LDEPHNANFMAKSATRMAILGVPLSLLGQPSMNF 209
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+ +GD L+A+GSPFG+LSP++FFNS YP S +SL++AD+RCLPGMEG
Sbjct: 210 ASSSSKGDTLVALGSPFGILSPVNFFNS---------YPSGSLKKSLMIADVRCLPGMEG 260
Query: 295 GPVFGEHAHFVGILIRPLRQK-SGAEIQ-LVIPWEAIATACSDLLLKEPQNAEKEIHINK 352
PVF ++ H +GILIRPLRQK SG EIQ LV+PW AI TACS LLL+EP
Sbjct: 261 APVFAKNGHLIGILIRPLRQKNSGVEIQQLVVPWGAITTACSHLLLEEP----------- 309
Query: 353 GNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVL 412
+ G + + S +L+ D+ + + I+KA+ SVCLIT++DGVWASG++
Sbjct: 310 ---SVEGKASQWGSEVLSVKS-------DASIPAQVAIEKAMESVCLITVNDGVWASGII 359
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQP-----EDSASSGHTGVDQYQKSQTL 467
LN+ GLILTNAHLLEPWR+GK G G F+P E+ +S+G +Q KSQTL
Sbjct: 360 LNEHGLILTNAHLLEPWRYGK----GGVYGEGFKPYVLGAEEFSSTGSKFWEQ--KSQTL 413
Query: 468 PPKMPKIVDSSVDEH-RAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSL 526
P K P+ SSV E+ R YK + GHR IRVRL HLD W WC A +VY+CK LD++L
Sbjct: 414 PRKAPRNHYSSVGENIREYKHNFLQTGHRDIRVRLCHLDSWTWCPANVVYICKEQLDIAL 473
Query: 527 LQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
LQL Y+P +L PI A+F P LG+ A+V+GHGLFGPRCG
Sbjct: 474 LQLEYVPGKLQPITANFSSPPLGTTAHVVGHGLFGPRCG 512
>gi|413945895|gb|AFW78544.1| hypothetical protein ZEAMMB73_013693 [Zea mays]
Length = 722
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/578 (41%), Positives = 347/578 (60%), Gaps = 40/578 (6%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS------ 54
M E+A +R+F +VR+ GPDPK +KMRRHAFH ++SG TTLSAS +LLP
Sbjct: 1 MEAQEIAAAARHFCAMVRIVGPDPKAVKMRRHAFHFHHSGSTTLSASALLLPRGALAEPP 60
Query: 55 -FFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLR 113
D + + +T AS+VEPFL+ + R+ E QP L+ +++D VE +L
Sbjct: 61 LLLDHICSAHGHAAGDVALTAASLVEPFLVAEQRNNSGEELQPRLVPETRLDVFVEYELG 120
Query: 114 SEKEHEDVDKGSPEWVTAQLMMLVDIPVSSL-ALQSLMEASSGLPEHEWEVGWSLAPYNN 172
+ +D G P W+ A+L+ +VD+P +++ AL L S + W+VGWSLA N
Sbjct: 121 NA---QDGKSGPPRWLPARLLAMVDVPTAAVSALSLLRHDDSFIRRPTWDVGWSLADANQ 177
Query: 173 SSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-SYLKDLPN 231
L K+S+ESN R + ES + +++KS +R+AILG+S S L D
Sbjct: 178 KQVSLFIESKSSLESN--------RNNSSLESVDSLMLAKSATRIAILGISTSNLNDARR 229
Query: 232 IALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
I ++ + +RGD LL VGSPFG++SP HFFNSVS+G+VANC PP + SLLMAD+ CLPG
Sbjct: 230 INVSVMQQRGDPLLIVGSPFGLMSPFHFFNSVSVGAVANCLPPCTARSSLLMADMHCLPG 289
Query: 292 MEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
MEG PVF +++ VG+L+ PL QK S E+QLVI W+AI T + L+E + +++
Sbjct: 290 MEGAPVFDQNSCLVGLLMNPLTQKGSNIEVQLVITWDAICTEWNSKKLEEIERPPRKLP- 348
Query: 351 NKGNLNAVGNSLLFNSHILNGACCYKY--EHVDSRCRSPLPIQKALASVCLITIDDGVWA 408
N N ++ L H+ N + + C SP +++A+++V L+T+ D WA
Sbjct: 349 NDKNTDSKSMEL---RHVYNYVRVFSSTDNKTNQHCISPRSLREAISAVVLVTVGDTSWA 405
Query: 409 SGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLP 468
SG++LN +GL+LTNAHLLEPWRFG+T+ S + SF E H + +++L
Sbjct: 406 SGIVLNKRGLVLTNAHLLEPWRFGRTSPSDLQ--ASFAGE------HLNAGE---NKSLQ 454
Query: 469 PKMPKIVDSSVDEHRAYKLS-SFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
P+ KI + +H+ + F RG R I VRLDH + IWC+A +V++ KGPLDV+LL
Sbjct: 455 PQQGKISNEDAVKHKVSSFNLGFKRGKR-ISVRLDHEERQIWCNASVVFISKGPLDVALL 513
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
Q+ +P +L I +F P+ GS YV+GHGLFGPR G
Sbjct: 514 QIEKVPVELNTIRPEFVCPTAGSPVYVVGHGLFGPRSG 551
>gi|293333802|ref|NP_001170121.1| uncharacterized protein LOC100384043 [Zea mays]
gi|224033643|gb|ACN35897.1| unknown [Zea mays]
gi|413945896|gb|AFW78545.1| hypothetical protein ZEAMMB73_013693 [Zea mays]
Length = 720
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/578 (41%), Positives = 349/578 (60%), Gaps = 42/578 (7%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS------ 54
M E+A +R+F +VR+ GPDPK +KMRRHAFH ++SG TTLSAS +LLP
Sbjct: 1 MEAQEIAAAARHFCAMVRIVGPDPKAVKMRRHAFHFHHSGSTTLSASALLLPRGALAEPP 60
Query: 55 -FFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLR 113
D + + +T AS+VEPFL+ + R+ E QP L+ +++D VE +L
Sbjct: 61 LLLDHICSAHGHAAGDVALTAASLVEPFLVAEQRNNSGEELQPRLVPETRLDVFVEYELG 120
Query: 114 SEKEHEDVDKGSPEWVTAQLMMLVDIPVSSL-ALQSLMEASSGLPEHEWEVGWSLAPYNN 172
+ +D G P W+ A+L+ +VD+P +++ AL L S + W+VGWSLA N
Sbjct: 121 NA---QDGKSGPPRWLPARLLAMVDVPTAAVSALSLLRHDDSFIRRPTWDVGWSLADAN- 176
Query: 173 SSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-SYLKDLPN 231
+ +E++ S +ES+R + ES + +++KS +R+AILG+S S L D
Sbjct: 177 ---------QKQVENDSRSSLESNRNNSSLESVDSLMLAKSATRIAILGISTSNLNDARR 227
Query: 232 IALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
I ++ + +RGD LL VGSPFG++SP HFFNSVS+G+VANC PP + SLLMAD+ CLPG
Sbjct: 228 INVSVMQQRGDPLLIVGSPFGLMSPFHFFNSVSVGAVANCLPPCTARSSLLMADMHCLPG 287
Query: 292 MEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
MEG PVF +++ VG+L+ PL QK S E+QLVI W+AI T + L+E + +++
Sbjct: 288 MEGAPVFDQNSCLVGLLMNPLTQKGSNIEVQLVITWDAICTEWNSKKLEEIERPPRKLP- 346
Query: 351 NKGNLNAVGNSLLFNSHILNGACCYKY--EHVDSRCRSPLPIQKALASVCLITIDDGVWA 408
N N ++ L H+ N + + C SP +++A+++V L+T+ D WA
Sbjct: 347 NDKNTDSKSMEL---RHVYNYVRVFSSTDNKTNQHCISPRSLREAISAVVLVTVGDTSWA 403
Query: 409 SGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLP 468
SG++LN +GL+LTNAHLLEPWRFG+T+ S + SF E H + +++L
Sbjct: 404 SGIVLNKRGLVLTNAHLLEPWRFGRTSPSDLQ--ASFAGE------HLNAGE---NKSLQ 452
Query: 469 PKMPKIVDSSVDEHRAYKLS-SFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
P+ KI + +H+ + F RG R I VRLDH + IWC+A +V++ KGPLDV+LL
Sbjct: 453 PQQGKISNEDAVKHKVSSFNLGFKRGKR-ISVRLDHEERQIWCNASVVFISKGPLDVALL 511
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
Q+ +P +L I +F P+ GS YV+GHGLFGPR G
Sbjct: 512 QIEKVPVELNTIRPEFVCPTAGSPVYVVGHGLFGPRSG 549
>gi|357133135|ref|XP_003568183.1| PREDICTED: glyoxysomal processing protease, glyoxysomal-like
[Brachypodium distachyon]
Length = 726
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/575 (40%), Positives = 345/575 (60%), Gaps = 45/575 (7%)
Query: 5 EMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDT------ 58
E+A +R+F + R+ GPDPK +KMRRHAFH + SG TTLSAS +LLP
Sbjct: 5 EIAAAARSFSAMARIVGPDPKAVKMRRHAFHLHQSGSTTLSASAVLLPPGALAEPPPPLL 64
Query: 59 -KVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEKE 117
+V + G+ +T AS+VEPFL+ + RD + E QP L+ + +D LVE
Sbjct: 65 GRVCAAHGHTGGVALTSASLVEPFLVAEQRDSASEELQPRLLPETCLDVLVE-------- 116
Query: 118 HE------DVDKGSPEWVTAQLMMLVDIPVSSLALQSLM-EASSGLPEHEWEVGWSLAPY 170
HE D D G+P+W++AQL+ +VD+ S+ ++ SL+ S W+VGW LA
Sbjct: 117 HEELGNIIDGDSGAPQWLSAQLLAMVDVAASAESILSLLTHDGSVFGSSSWDVGWPLADV 176
Query: 171 NNSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLK-DL 229
N + +E+ S +ES+R A ES S+++KS +R+AILGVSS +
Sbjct: 177 N----------QKQVENGVRSSLESNRKNAYAESIEPSMLAKSATRIAILGVSSLTSSNE 226
Query: 230 PNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCL 289
+I ++P +RGD LL VGSPFG+LSP HFFNS+S+G+VANC PP + SLLMADI CL
Sbjct: 227 IHINVSPAPQRGDSLLVVGSPFGILSPFHFFNSISVGAVANCLPPGAVRSSLLMADIHCL 286
Query: 290 PGMEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEI 348
PGMEG PVF +++ VG+L++PLRQ+ S ++QLVI W+ I TA S L+ + A ++
Sbjct: 287 PGMEGAPVFDKNSCLVGMLMKPLRQRGSSIQVQLVITWDGICTAWSSNKLEGIEQASNDL 346
Query: 349 HINKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWA 408
+K + + S +++ + + + + + R P +++A++SV L+ + D WA
Sbjct: 347 LDDKNADSKMVESCAMDNYRRSVSISANHHN---QYRIPASLKEAISSVVLVKVGDTSWA 403
Query: 409 SGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLP 468
SG++LN GLILTNAHLLEPWRFG+T+ G +N ++ S + H + +++ L
Sbjct: 404 SGIVLNKNGLILTNAHLLEPWRFGRTSPLGLQNEIT-----SLTGEHV---REVENKLLQ 455
Query: 469 PKMPKIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQ 528
+ K+ + +H A + + ++I VRLDH WC A +V++ KGPLDV+LLQ
Sbjct: 456 SQECKMSNQDAVKHEAPLFNLGFKREKRISVRLDHGKRQTWCSASVVFISKGPLDVALLQ 515
Query: 529 LGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPR 563
L + +LC I +F P+ GS+ YV+GHGL GPR
Sbjct: 516 LEMVAIELCAIRPEFICPTAGSSVYVVGHGLLGPR 550
>gi|242090979|ref|XP_002441322.1| hypothetical protein SORBIDRAFT_09g024450 [Sorghum bicolor]
gi|241946607|gb|EES19752.1| hypothetical protein SORBIDRAFT_09g024450 [Sorghum bicolor]
Length = 717
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 339/573 (59%), Gaps = 40/573 (6%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS------ 54
M E+A +R+F + R+ GPDPK +KMRRHAFH ++SG TTLSAS +LLP
Sbjct: 1 METQEIAAAARHFSAMARIVGPDPKAVKMRRHAFHLHHSGSTTLSASALLLPRGALAEPP 60
Query: 55 -FFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLR 113
D A + +T AS+VEPFL+ + R+ E QP L+ ++D LVE
Sbjct: 61 PLLDHICAVHGHVAGDVALTAASLVEPFLVAEQRNNSGEELQPRLVPEVRLDVLVE---- 116
Query: 114 SEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNS 173
+ +D G P W+ A+L+ +VD+P ++ + SL+ + W+VGWSLA N
Sbjct: 117 -QGSAQDGKSGPPRWLPARLLAMVDVPTAADSALSLLRHEEFIRRPTWDVGWSLADAN-- 173
Query: 174 SQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY-LKDLPNI 232
+ +E++ ++S+R A ES + ++SKS +R+AILG+S++ D I
Sbjct: 174 --------QKQVENDTRCSLKSNRNNASIESVDPLMLSKSATRIAILGISTFNSNDARCI 225
Query: 233 ALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGM 292
++ + +RGD LL VGSPFG++SP HFFNS+S+G+VANC PP + SLLMADI CLPGM
Sbjct: 226 NVSVMQQRGDPLLIVGSPFGLMSPFHFFNSISVGAVANCLPPCTVRSSLLMADIHCLPGM 285
Query: 293 EGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHIN 351
EG PVF ++ VG+L+ PLRQK S E+QLVI W+AI + L E A +E+
Sbjct: 286 EGAPVFDRNSCLVGLLMNPLRQKGSNIEVQLVITWDAICMEWNSKKLDEIGRAPRELPNG 345
Query: 352 KGNLNAVGNSL-LFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASG 410
K N S+ L + + ++ C SP +++A+++V L+T+ D WASG
Sbjct: 346 K---NTDSKSMELRHGYNYGRFVSSMVNKINQHCISPPLLREAISAVVLVTVSDTSWASG 402
Query: 411 VLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPK 470
++LN +GL+LTNAHLLEPWRFG+T+ S + SF E H + + SQ P+
Sbjct: 403 IVLNKRGLVLTNAHLLEPWRFGRTSPSDLQ--ASFTGE------HLNAGENKSSQ---PE 451
Query: 471 MPKIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLG 530
+ +V+ + + F R ++I VRLDH + IWC+A +V++ KGPLDV+LLQ+
Sbjct: 452 GKFSNEDAVNHNVSLFNLGFKR-EKRISVRLDHAERQIWCNASVVFISKGPLDVALLQID 510
Query: 531 YIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPR 563
+P +L I +F P+ GS+ YV+GHGLFGPR
Sbjct: 511 KVPIELNTIRPEFVCPTAGSSVYVVGHGLFGPR 543
>gi|413945897|gb|AFW78546.1| hypothetical protein ZEAMMB73_013693 [Zea mays]
Length = 716
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/578 (40%), Positives = 342/578 (59%), Gaps = 46/578 (7%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS------ 54
M E+A +R+F + DPK +KMRRHAFH ++SG TTLSAS +LLP
Sbjct: 1 MEAQEIAAAARHFCAM------DPKAVKMRRHAFHFHHSGSTTLSASALLLPRGALAEPP 54
Query: 55 -FFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLR 113
D + + +T AS+VEPFL+ + R+ E QP L+ +++D VE +L
Sbjct: 55 LLLDHICSAHGHAAGDVALTAASLVEPFLVAEQRNNSGEELQPRLVPETRLDVFVEYELG 114
Query: 114 SEKEHEDVDKGSPEWVTAQLMMLVDIPVSSL-ALQSLMEASSGLPEHEWEVGWSLAPYNN 172
+ +D G P W+ A+L+ +VD+P +++ AL L S + W+VGWSLA N
Sbjct: 115 NA---QDGKSGPPRWLPARLLAMVDVPTAAVSALSLLRHDDSFIRRPTWDVGWSLADANQ 171
Query: 173 SSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-SYLKDLPN 231
L K+S+ESN R + ES + +++KS +R+AILG+S S L D
Sbjct: 172 KQVSLFIESKSSLESN--------RNNSSLESVDSLMLAKSATRIAILGISTSNLNDARR 223
Query: 232 IALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
I ++ + +RGD LL VGSPFG++SP HFFNSVS+G+VANC PP + SLLMAD+ CLPG
Sbjct: 224 INVSVMQQRGDPLLIVGSPFGLMSPFHFFNSVSVGAVANCLPPCTARSSLLMADMHCLPG 283
Query: 292 MEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
MEG PVF +++ VG+L+ PL QK S E+QLVI W+AI T + L+E + +++
Sbjct: 284 MEGAPVFDQNSCLVGLLMNPLTQKGSNIEVQLVITWDAICTEWNSKKLEEIERPPRKLP- 342
Query: 351 NKGNLNAVGNSLLFNSHILNGACCYKY--EHVDSRCRSPLPIQKALASVCLITIDDGVWA 408
N N ++ L H+ N + + C SP +++A+++V L+T+ D WA
Sbjct: 343 NDKNTDSKSMEL---RHVYNYVRVFSSTDNKTNQHCISPRSLREAISAVVLVTVGDTSWA 399
Query: 409 SGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLP 468
SG++LN +GL+LTNAHLLEPWRFG+T+ S + SF E H + +++L
Sbjct: 400 SGIVLNKRGLVLTNAHLLEPWRFGRTSPSDLQ--ASFAGE------HLNAGE---NKSLQ 448
Query: 469 PKMPKIVDSSVDEHRAYKLS-SFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
P+ KI + +H+ + F RG R I VRLDH + IWC+A +V++ KGPLDV+LL
Sbjct: 449 PQQGKISNEDAVKHKVSSFNLGFKRGKR-ISVRLDHEERQIWCNASVVFISKGPLDVALL 507
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
Q+ +P +L I +F P+ GS YV+GHGLFGPR G
Sbjct: 508 QIEKVPVELNTIRPEFVCPTAGSPVYVVGHGLFGPRSG 545
>gi|222632099|gb|EEE64231.1| hypothetical protein OsJ_19064 [Oryza sativa Japonica Group]
Length = 736
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/595 (37%), Positives = 343/595 (57%), Gaps = 65/595 (10%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDT-- 58
M E+A +R F + R+ GPDPK KMRRHAFH + SG TTLSAS +LLP
Sbjct: 1 MAPREVAAAARGFSAMARIVGPDPKAFKMRRHAFHLHQSGSTTLSASALLLPPGSLAEPP 60
Query: 59 ----KVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRS 114
++ + G+ +T AS+VEPFL+ + R+ + E QP L+ + +D LVE
Sbjct: 61 PLLDRICAAHGHAGGVALTSASLVEPFLVEEQRNSPSQELQPRLVPEAHLDVLVE----- 115
Query: 115 EKEHEDV---DKGSPEWVTAQLM--------------MLVDIPVSSLALQSLMEASSGL- 156
+E ++ G+P W++A+L+ ++VD+ S+ ++ SL++ L
Sbjct: 116 HEESRNIGGGKTGAPRWLSARLLAILYFSQQDSTVGLLVVDVQASADSVLSLLQHEGSLI 175
Query: 157 PEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSR 216
W+V WSLA N + ++++ +E +R A ES+ +++KS +R
Sbjct: 176 RSSSWDVCWSLADVN----------QKQVDNDARYSLECNRKNAYAESTEPPMLAKSATR 225
Query: 217 VAILGVSSY-LKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR 275
+AILGVS+ + I ++ + +RGD LL +GSPFG+LSP+HFFNS+S+G VANC PP
Sbjct: 226 IAILGVSNLNSSNTRCINVSLMQQRGDSLLIMGSPFGILSPVHFFNSISVGVVANCLPPG 285
Query: 276 STTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACS 334
+ SLLMAD+ CLPGMEG PVF +++ VG+L++PLRQ+ S E+QLVI W+AI A +
Sbjct: 286 TARSSLLMADVHCLPGMEGAPVFDKNSCLVGMLMKPLRQRGSSTEVQLVITWDAICNAWN 345
Query: 335 DLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSH---ILNGACCYKYEHVDSRCRSPLPIQ 391
L+ + E+ +K + S + + H + N A +++ SP +
Sbjct: 346 SDKLERIGHPPSELVDDKSSDCKYKESCVADKHRRFVPNSA-----NNLNQYDVSP-SLT 399
Query: 392 KALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSA 451
+A++SV L+T+ + WASG++LN GLI+TNAHLLEPWRFG+T+ G +N ++ E
Sbjct: 400 EAISSVVLVTVSETSWASGIILNKNGLIMTNAHLLEPWRFGRTSPLGLQNKIASFSEHIC 459
Query: 452 SSGHTGVDQYQKSQTLPPKMPKIVDSSVDEHRAYKLSSFSRG---HRKIRVRLDHLDPWI 508
++ L P+ K+ + +H +LS F+ G R I VRLDH +
Sbjct: 460 GG---------ENNLLQPQQCKVSNEDAVKH---ELSLFNFGLKKDRAISVRLDHGERKT 507
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPR 563
WC+A +V++ KGPLDV+LLQ+ P +LC I +F P+ GS+ YV+GHGL GPR
Sbjct: 508 WCNASVVFISKGPLDVALLQMEKTPIELCAIRPEFVCPTAGSSVYVVGHGLLGPR 562
>gi|218197036|gb|EEC79463.1| hypothetical protein OsI_20473 [Oryza sativa Indica Group]
Length = 736
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/595 (37%), Positives = 344/595 (57%), Gaps = 65/595 (10%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDT-- 58
M E+A +R F + R+ GPDPK +KMRRHAFH + SG TTLSAS +LLP
Sbjct: 1 MAPREVAAAARGFSAMARIVGPDPKAVKMRRHAFHLHQSGSTTLSASALLLPPGSLAEPP 60
Query: 59 ----KVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLRS 114
++ + G+ +T AS+VEPFL+ + R+ + E QP L+ + +D LVE
Sbjct: 61 PLLDRICAAHGHAGGVALTSASLVEPFLVEEQRNSPSQELQPRLVPEAHLDVLVE----- 115
Query: 115 EKEHEDV---DKGSPEWVTAQLM--------------MLVDIPVSSLALQSLMEASSGL- 156
+E ++ G+P W++A+L+ ++VD+ S+ ++ SL++ L
Sbjct: 116 HEESRNIGGGKTGAPRWLSARLLAILYFSQQDSTVGLLVVDVQASADSVLSLLQHEGSLI 175
Query: 157 PEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSR 216
W+V WSLA N + ++++ +E +R A ES+ +++KS +R
Sbjct: 176 RSSSWDVCWSLADVN----------QKQVDNDARYSLECNRKNAYAESTEPPMLAKSATR 225
Query: 217 VAILGVSSY-LKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR 275
+AILGVS+ + I ++ + +RGD LL +GSPFG+LSP+HFFNS+S+G VANC PP
Sbjct: 226 IAILGVSNLNSSNTRCINVSLMQQRGDSLLIMGSPFGILSPVHFFNSISVGVVANCLPPG 285
Query: 276 STTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACS 334
+ SLLMAD+ CLPGMEG PVF +++ VG+L++PLRQ+ S E+QLVI W+AI A +
Sbjct: 286 TARSSLLMADVHCLPGMEGAPVFDKNSCLVGMLMKPLRQRGSSTEVQLVITWDAICNAWN 345
Query: 335 DLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSH---ILNGACCYKYEHVDSRCRSPLPIQ 391
L+ + E+ +K + S + + H + N A +++ SP +
Sbjct: 346 SDKLERIGHPPSELVDDKSSDCKYKESCVADKHRRFVPNSA-----NNLNQYDVSP-SLT 399
Query: 392 KALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSA 451
+A++SV L+T+ + WASG++LN GLI+TNAHLLEPWRFG+T+ G +N ++ E
Sbjct: 400 EAISSVVLVTVSETSWASGIILNKNGLIMTNAHLLEPWRFGRTSPLGLQNKIASFSEHIC 459
Query: 452 SSGHTGVDQYQKSQTLPPKMPKIVDSSVDEHRAYKLSSFSRG---HRKIRVRLDHLDPWI 508
++ L P+ K+ + +H +LS F+ G R I VRLDH +
Sbjct: 460 GG---------ENNLLQPQQCKVSNEDAVKH---ELSLFNFGLKKDRAISVRLDHGERKT 507
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPR 563
WC+A +V++ KGPLDV+LLQ+ P +LC I +F P+ GS+ YV+GHGL GPR
Sbjct: 508 WCNASVVFISKGPLDVALLQMEKTPIELCAIRPEFVCPTAGSSVYVVGHGLLGPR 562
>gi|238836906|gb|ACR61555.1| peptidase [Zea mays]
Length = 729
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 224/600 (37%), Positives = 327/600 (54%), Gaps = 102/600 (17%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGP-----------------------DPKGLKMRRHAFHQY 37
M E+A +R+F +VR+ GP DPK +KMRRHAFH +
Sbjct: 1 MEAQEIAAAARHFCAMVRIVGPLTRIILLTAVLLHFSGLRHLRLQDPKAVKMRRHAFHFH 60
Query: 38 NSGKTTLSASGMLLPLS-------FFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKD 90
+SG TTLSAS +LLP D + + +T AS+VEPFL+ + R+
Sbjct: 61 HSGSTTLSASALLLPRGALAEPPLLLDHICSAHGHAAGDVALTAASLVEPFLVAEQRNNS 120
Query: 91 TSEGQPELITGSQIDFLVEGKLRSEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLM 150
E QP L+ +++D VE +L + +D G P W+ A+L+ +V
Sbjct: 121 GEELQPRLVPETRLDVFVEYELGNA---QDGKSGPPRWLPARLLAMV------------- 164
Query: 151 EASSGLPEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLM 210
E++ S +ES+R + ES + ++
Sbjct: 165 -----------------------------------ENDSRSSLESNRNNSSLESVDSLML 189
Query: 211 SKSTSRVAILGVS-SYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA 269
+KS +R+AILG+S S L D I ++ + +RGD LL VGSPFG++SP HFFNSVS+G+VA
Sbjct: 190 AKSATRIAILGISTSNLNDARRINVSVMQQRGDPLLIVGSPFGLMSPFHFFNSVSVGAVA 249
Query: 270 NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEA 328
NC PP + SLLMAD+ CLPGMEG PVF +++ VG+L+ PL QK S E+QLVI W+A
Sbjct: 250 NCLPPCTARSSLLMADMHCLPGMEGAPVFDQNSCLVGLLMNPLTQKGSNIEVQLVITWDA 309
Query: 329 IATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKY--EHVDSRCRS 386
I T + L+E + +++ N N ++ L H+ N + + C S
Sbjct: 310 ICTEWNSKKLEEIERPPRKLP-NDKNTDSKSMEL---RHVYNYVRVFSSTDNKTNQHCIS 365
Query: 387 PLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQ 446
P +++A+++V L+T+ D WASG++LN +GL+LTNAHLLEPWRFG+T+ S + SF
Sbjct: 366 PRSLREAISAVVLVTVGDTSWASGIVLNKRGLVLTNAHLLEPWRFGRTSPSDLQ--ASFA 423
Query: 447 PEDSASSGHTGVDQYQKSQTLPPKMPKIVDSSVDEHRAYKLS-SFSRGHRKIRVRLDHLD 505
E H + +++L P+ KI + +H+ + F RG R I VRLDH +
Sbjct: 424 GE------HLNAGE---NKSLQPQQGKISNEDAVKHKVSSFNLGFKRGKR-ISVRLDHEE 473
Query: 506 PWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
IWC+A +V++ KGPLDV+LLQ+ +P +L I +F P+ GS YV+GHGLFGPR G
Sbjct: 474 RQIWCNASVVFISKGPLDVALLQIEKVPVELNTIRPEFVCPTAGSPVYVVGHGLFGPRSG 533
>gi|115464691|ref|NP_001055945.1| Os05g0497700 [Oryza sativa Japonica Group]
gi|113579496|dbj|BAF17859.1| Os05g0497700 [Oryza sativa Japonica Group]
Length = 694
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 322/550 (58%), Gaps = 45/550 (8%)
Query: 29 MRRHAFHQYNSGKTTLSASGMLLPLSFFDT------KVAERNWGVNGLIVTVASVVEPFL 82
MRRHAFH + SG TTLSAS +LLP ++ + G+ +T AS+VEPFL
Sbjct: 1 MRRHAFHLHQSGSTTLSASALLLPPGSLAEPPPLLDRICAAHGHAGGVALTSASLVEPFL 60
Query: 83 LPQYRDKDTSEGQPELITGSQIDFLVEGKLRSEKEHEDV---DKGSPEWVTAQLMMLVDI 139
+ + R+ + E QP L+ + +D LVE +E ++ G+P W++A+L+ +VD+
Sbjct: 61 VEEQRNSPSQELQPRLVPEAHLDVLVE-----HEESRNIGGGKTGAPRWLSARLLAIVDV 115
Query: 140 PVSSLALQSLMEASSGL-PEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKISLMESHRP 198
S+ ++ SL++ L W+V WSLA N + ++++ +E +R
Sbjct: 116 QASADSVLSLLQHEGSLIRSSSWDVCWSLADVN----------QKQVDNDARYSLECNRK 165
Query: 199 FAMEESSNLSLMSKSTSRVAILGVSSY-LKDLPNIALTPLNKRGDLLLAVGSPFGVLSPM 257
A ES+ +++KS +R+AILGVS+ + I ++ + +RGD LL +GSPFG+LSP+
Sbjct: 166 NAYAESTEPPMLAKSATRIAILGVSNLNSSNTRCINVSLMQQRGDSLLIMGSPFGILSPV 225
Query: 258 HFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQK-S 316
HFFNS+S+G VANC PP + SLLMAD+ CLPGMEG PVF +++ VG+L++PLRQ+ S
Sbjct: 226 HFFNSISVGVVANCLPPGTARSSLLMADVHCLPGMEGAPVFDKNSCLVGMLMKPLRQRGS 285
Query: 317 GAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSH---ILNGAC 373
E+QLVI W+AI A + L+ + E+ +K + S + + H + N A
Sbjct: 286 STEVQLVITWDAICNAWNSDKLERIGHPPSELVDDKSSDCKYKESCVADKHRRFVPNSA- 344
Query: 374 CYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGK 433
+++ SP + +A++SV L+T+ + WASG++LN GLI+TNAHLLEPWRFG+
Sbjct: 345 ----NNLNQYDVSP-SLTEAISSVVLVTVSETSWASGIILNKNGLIMTNAHLLEPWRFGR 399
Query: 434 TTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKMPKIVDSSVDEHRAYKLSSFSRG 493
T+ G +N ++ E ++ L P+ K+ + +H + +
Sbjct: 400 TSPLGLQNKIASFSEHICGG---------ENNLLQPQQCKVSNEDAVKHELSLFNFGLKK 450
Query: 494 HRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAY 553
R I VRLDH + WC+A +V++ KGPLDV+LLQ+ P +LC I +F P+ GS+ Y
Sbjct: 451 DRAISVRLDHGERKTWCNASVVFISKGPLDVALLQMEKTPIELCAIRPEFVCPTAGSSVY 510
Query: 554 VIGHGLFGPR 563
V+GHGL GPR
Sbjct: 511 VVGHGLLGPR 520
>gi|168046602|ref|XP_001775762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672914|gb|EDQ59445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1068
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 239/628 (38%), Positives = 322/628 (51%), Gaps = 87/628 (13%)
Query: 15 VLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLSFFDTKVAERNWGVNGL---- 70
V+VRV GPDPKG KMRRHAF SG TTLSASG L+P K G L
Sbjct: 234 VMVRVHGPDPKGRKMRRHAFFHSESGDTTLSASGFLVPCVMNMKKPGSTALGQADLYETT 293
Query: 71 -------IVTVASVVEPFLLPQYRDKDTSE-------GQPELITGSQIDFLVEGKLRSEK 116
++T AS+VEPFL P+ + E P+LI G+++D LVE SEK
Sbjct: 294 SSEPSVVVITCASIVEPFLAPKSHGISSREVCVVPEKDFPKLIRGAEVDILVEVPDLSEK 353
Query: 117 EHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSSQP 176
+ S W+ QL+ +VD+P + ALQ L++ G + WEVGW+LAP +++Q
Sbjct: 354 GSGYSGEHSVCWLPGQLLAVVDVPAAGAALQDLLDVHGGSVKGVWEVGWALAPVEDNAQQ 413
Query: 177 LMGVVKTSI---------ESNKISLMESHRPFAMEES--SNLSLMSKSTSRVAILGVSSY 225
L ++ + I +++ L RP A + S L + + + +++A+L V S+
Sbjct: 414 LHSLLTSEILTETQLQEDVASQHDLKGDKRPVAHAVAGVSRLGMAAAAATKIAVLSVGSH 473
Query: 226 ----------------------LKDLPN-IALTPLNKRGDLLLAVGSPFGVLSPMHFFNS 262
L +P + +RGD L+AVGSPFG LSP+HF NS
Sbjct: 474 GDSSALNTCLKKRHQLSKVSNGLSKMPTGHVIAEQKRRGDSLIAVGSPFGALSPLHFQNS 533
Query: 263 VSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQ 321
VS+G V+N +PP SLLMAD+RCLPGMEGGPVF E + VG+L RPLRQ+ G AE+Q
Sbjct: 534 VSVGIVSNLWPPTRGPPSLLMADVRCLPGMEGGPVFDERGNLVGMLTRPLRQRGGAAEVQ 593
Query: 322 L--------VIPWEAIATACSDLLLKEPQNAEKEIHINKG----------NLNAVGNSLL 363
L V +D+LL Q + IN G L +++L
Sbjct: 594 LLTQDVTHFVANMHMQLVMTTDVLLPVLQ----RVGINVGVLCNTKSPDVQLQPSASAML 649
Query: 364 FNSHILNGACCY-----KYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQGL 418
+ C + + P +++A+ SV LITI DG WASGV+LN GL
Sbjct: 650 VENSSFETQPCRPGSIESHSTYQAMQYVPSAVERAVTSVVLITIGDGAWASGVILNKTGL 709
Query: 419 ILTNAHLLEPWRFGK-TTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKMPKIVDS 477
ILTNAHLLEPWRFGK V NG P+DS D+ Q+ L + +
Sbjct: 710 ILTNAHLLEPWRFGKPRMVPSPVNGSI--PKDSGFP--LSCDESQEDLALNQLQEEEISK 765
Query: 478 SVDEHR--AYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQ 535
V R ++ + +++IRVRLDH P W A+ VYV +GPLD++LLQL P
Sbjct: 766 GVSTSRTSSWPTDVSQKNYQRIRVRLDHRQPRSWHAARPVYVSQGPLDIALLQLESPPPG 825
Query: 536 LCPIDADFGQPSLGSAAYVIGHGLFGPR 563
L PI D P+ GS A V+GHGLFGPR
Sbjct: 826 LHPITPDKECPTPGSTAVVLGHGLFGPR 853
>gi|413945893|gb|AFW78542.1| hypothetical protein ZEAMMB73_013693 [Zea mays]
Length = 517
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 231/362 (63%), Gaps = 21/362 (5%)
Query: 209 LMSKSTSRVAILGVS-SYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGS 267
+++KS +R+AILG+S S L D I ++ + +RGD LL VGSPFG++SP HFFNSVS+G+
Sbjct: 1 MLAKSATRIAILGISTSNLNDARRINVSVMQQRGDPLLIVGSPFGLMSPFHFFNSVSVGA 60
Query: 268 VANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPW 326
VANC PP + SLLMAD+ CLPGMEG PVF +++ VG+L+ PL QK S E+QLVI W
Sbjct: 61 VANCLPPCTARSSLLMADMHCLPGMEGAPVFDQNSCLVGLLMNPLTQKGSNIEVQLVITW 120
Query: 327 EAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKY--EHVDSRC 384
+AI T + L+E + +++ N N ++ L H+ N + + C
Sbjct: 121 DAICTEWNSKKLEEIERPPRKLP-NDKNTDSKSMEL---RHVYNYVRVFSSTDNKTNQHC 176
Query: 385 RSPLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVS 444
SP +++A+++V L+T+ D WASG++LN +GL+LTNAHLLEPWRFG+T+ S + S
Sbjct: 177 ISPRSLREAISAVVLVTVGDTSWASGIVLNKRGLVLTNAHLLEPWRFGRTSPSDLQ--AS 234
Query: 445 FQPEDSASSGHTGVDQYQKSQTLPPKMPKIVDSSVDEHRAYKLS-SFSRGHRKIRVRLDH 503
F E H + +++L P+ KI + +H+ + F RG R I VRLDH
Sbjct: 235 FAGE------HLNAGE---NKSLQPQQGKISNEDAVKHKVSSFNLGFKRGKR-ISVRLDH 284
Query: 504 LDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPR 563
+ IWC+A +V++ KGPLDV+LLQ+ +P +L I +F P+ GS YV+GHGLFGPR
Sbjct: 285 EERQIWCNASVVFISKGPLDVALLQIEKVPVELNTIRPEFVCPTAGSPVYVVGHGLFGPR 344
Query: 564 CG 565
G
Sbjct: 345 SG 346
>gi|326531802|dbj|BAJ97905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 496
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/331 (41%), Positives = 201/331 (60%), Gaps = 22/331 (6%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
KRGD LL VGSPFG+LSP HFFNS+S+G+VANC PP + SLLMADI CLPGMEG PVF
Sbjct: 6 KRGDSLLVVGSPFGILSPFHFFNSISVGAVANCLPPGAVRSSLLMADIHCLPGMEGAPVF 65
Query: 299 GEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNA 357
+++ VG+L++PLRQ+ S ++QLVI W+ I TA S L+ + E+ +K
Sbjct: 66 DKNSCLVGMLMKPLRQRGSNIQVQLVITWDGICTAWSRNKLQLIEQVSNELLDDKS---- 121
Query: 358 VGNSLLFNSHILNGACCYKYEHVDSRCRSPLP--IQKALASVCLITIDDGVWASGVLLND 415
+S + S ++ + + + +P +++A++SV L+T+ D WASG+LLN
Sbjct: 122 -ADSKMMESCSMDNHRRFASNSANDLNQYSIPPSLREAISSVVLVTVGDTTWASGILLNK 180
Query: 416 QGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSG---HTGVDQYQKSQTLPPKMP 472
GL+LTNAHLLEPWRFG+T+ G Q + ++ +G H G ++ +SQ
Sbjct: 181 NGLVLTNAHLLEPWRFGRTSTLG------LQHKTTSLAGEYLHEGQNKLLQSQHC----- 229
Query: 473 KIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYI 532
K+ + +H + + ++I VRLD + W A +V++ KGPLDV+LLQ+
Sbjct: 230 KMFNEDAVKHEVSFFNLGPKREKRISVRLDDGEKQTWYTASVVFISKGPLDVALLQMEKA 289
Query: 533 PDQLCPIDADFGQPSLGSAAYVIGHGLFGPR 563
+ C I +F P+ GS+ YV+GHGL GPR
Sbjct: 290 AIEFCAIRPEFVCPTSGSSIYVVGHGLLGPR 320
>gi|48475211|gb|AAT44280.1| unknown protein [Oryza sativa Japonica Group]
Length = 396
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 23/205 (11%)
Query: 373 CCYKYEHVDSRCRSPLP--------------IQKALASVCLITIDDGVWASGVLLNDQGL 418
C YK V + R +P + +A++SV L+T+ + WASG++LN GL
Sbjct: 27 CKYKESCVADKHRRFVPNSANNLNQYDVSPSLTEAISSVVLVTVSETSWASGIILNKNGL 86
Query: 419 ILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKMPKIVDSS 478
I+TNAHLLEPWRFG+T+ G +N ++ E ++ L P+ K+ +
Sbjct: 87 IMTNAHLLEPWRFGRTSPLGLQNKIASFSEHICGG---------ENNLLQPQQCKVSNED 137
Query: 479 VDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCP 538
+H + + R I VRLDH + WC+A +V++ KGPLDV+LLQ+ P +LC
Sbjct: 138 AVKHELSLFNFGLKKDRAISVRLDHGERKTWCNASVVFISKGPLDVALLQMEKTPIELCA 197
Query: 539 IDADFGQPSLGSAAYVIGHGLFGPR 563
I +F P+ GS+ YV+GHGL GPR
Sbjct: 198 IRPEFVCPTAGSSVYVVGHGLLGPR 222
>gi|413945894|gb|AFW78543.1| hypothetical protein ZEAMMB73_013693 [Zea mays]
Length = 128
Score = 93.2 bits (230), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 7/119 (5%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS------ 54
M E+A +R+F +VR+ GPDPK +KMRRHAFH ++SG TTLSAS +LLP
Sbjct: 1 MEAQEIAAAARHFCAMVRIVGPDPKAVKMRRHAFHFHHSGSTTLSASALLLPRGALAEPP 60
Query: 55 -FFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKL 112
D + + +T AS+VEPFL+ + R+ E QP L+ +++D VE K+
Sbjct: 61 LLLDHICSAHGHAAGDVALTAASLVEPFLVAEQRNNSGEELQPRLVPETRLDVFVEVKI 119
>gi|330806449|ref|XP_003291182.1| hypothetical protein DICPUDRAFT_155757 [Dictyostelium purpureum]
gi|325078665|gb|EGC32304.1| hypothetical protein DICPUDRAFT_155757 [Dictyostelium purpureum]
Length = 737
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 140/344 (40%), Gaps = 68/344 (19%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR---STTRSLLMADIRCLPGMEGG 295
+ G+ + VGSPFG +SP F NS+S G + NC P S+ S+ + D R LPG EG
Sbjct: 229 RSGNRIYVVGSPFGFISPTMFLNSISSGIICNCIAPTPQSSSNPSMFLIDARSLPGNEGS 288
Query: 296 PVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNL 355
VF VGI+ P+R K+ + P I C L+EP +
Sbjct: 289 AVFNRQGLLVGIVAPPIRSKNDKLPFTLAP--VIPIHCYLSKLEEPPLS----------- 335
Query: 356 NAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALA----SVCLITIDDGVWASGV 411
+F ++L Y PIQ+A+ S+ L+ + W SGV
Sbjct: 336 -------IFPQYLLTSPSIYD------------PIQQAVTQCQNSIVLVQFKNS-WGSGV 375
Query: 412 LLNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPEDSASSGHTGVDQYQKSQTLPPKM 471
L+++ G ILTNAHL+ P + Y +S
Sbjct: 376 LISENGYILTNAHLIIPSLQQDSNNQ------------QQQQVTQEQLAYPESLY----K 419
Query: 472 PKIVDSSVDEHRAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGY 531
K+VD ++++ + SF+ + + +IWC I Y+ LD++L+++
Sbjct: 420 DKLVDIRINKN---SIKSFNSLQTHLFNQQQSNQKYIWCKGSIEYISHTHLDIALIKIKL 476
Query: 532 IPDQLCPIDADFGQPSLGSAAY---------VIGHGLFGPRCGK 566
I ++L + D S +Y V+ + L P+ G+
Sbjct: 477 IQNELDHYNNDNHSSVHNSNSYDESLIKFNHVVCNPLLNPKYGE 520
>gi|328870185|gb|EGG18560.1| hypothetical protein DFA_04054 [Dictyostelium fasciculatum]
Length = 532
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTR-SLLMADIRCLPGMEGGPVFG 299
G + V SPFG +SP F NS+S G + NC R+ ++ SL + D RCLPG EGG VF
Sbjct: 145 GSPVTVVASPFGYISPTIFLNSLSTGVICNCIQERTYSQPSLYLTDARCLPGSEGGGVFD 204
Query: 300 EHAHFVGILIRPLR---QKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLN 356
VG++ P++ KS + +IP A L KE I++ G N
Sbjct: 205 NDGRLVGVVATPIKSKDDKSPFNLTPLIPVHTFIMALEKLSKKE------NINLFPGTTN 258
Query: 357 AVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQ 416
I +G S C S + +L + ++ W SGV+++D
Sbjct: 259 -----------IGSGGMGSLSSSFPSPCPSSDGLLTSLKNKIVLVKFKDTWGSGVIISDD 307
Query: 417 GLILTNAHLLEP 428
G +LTNAHLL P
Sbjct: 308 GYVLTNAHLLTP 319
>gi|303288772|ref|XP_003063674.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454742|gb|EEH52047.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 660
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 184/463 (39%), Gaps = 94/463 (20%)
Query: 5 EMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQ-----------YNSGKTTLSASGMLLPL 53
E+A + VRV+ DP RR AF + ++ T++SAS M LP
Sbjct: 13 ELATIASELTATVRVRALDPDLAVGRRAAFCRCGDLDGSDGDDASAPTTSVSASAMRLPS 72
Query: 54 SFFDTKVAERNWGVNGLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGKLR 113
S D E L+V ++ PFL +D G P L + + ++
Sbjct: 73 SIVDGGGGE-------LLVAPLALFLPFLR-----RDARGGAPGL------GLVDDAEVH 114
Query: 114 SEKEHEDVDKGSPE-WVTAQLMMLVDIPVSSLALQSLMEASS-GLPEHEWEVGWSLAPYN 171
+E D GS WV A+++ P + A+ +L A G + W G ++ P+N
Sbjct: 115 VMREATVDDGGSGGVWVPARVVASAVPPDARDAVNALASADGLGALKRGWTAGGAV-PWN 173
Query: 172 NSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPN 231
G ++ + + L + P + S +S ++ ++
Sbjct: 174 GDGGGGGGFDVGAVVAGFVVLRAATGPPSPSPSPGIS--------------RAFARE--- 216
Query: 232 IALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR----------STTRSL 281
+PL + GD +L+ GSPFGVL+P HF N+V+ GSV+ + R S +
Sbjct: 217 ---SPLPRAGDAILSCGSPFGVLAPSHFANAVTTGSVSRTWRRRTPVGRHVADTSAPPPI 273
Query: 282 LMADIRCLPGMEGGPVFGEHAHFVGILIRPL--RQKSGAEIQLVIPWEAIATACSDLLLK 339
LM D+R LPG EGG V +G+L PL R G +P +L
Sbjct: 274 LMLDLRALPGTEGGVVLDAGGGVLGMLTPPLVARGGGGGGEDDAVPLALTIDCVKRAML- 332
Query: 340 EPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCL 399
+ + +S +++ + A + R+PL A SV L
Sbjct: 333 --------------TMASSSSSSSSSTNEEDDAPPIAVASTSASPRTPLD-DAASTSVVL 377
Query: 400 ITIDDG-------VWASGVLLNDQ-------GLILTNAHLLEP 428
++ +G WASG++L LILTNAH++ P
Sbjct: 378 LSTGNGNDDASNPSWASGIVLTAGDGARGHPALILTNAHVVHP 420
>gi|281208492|gb|EFA82668.1| hypothetical protein PPL_04362 [Polysphondylium pallidum PN500]
Length = 662
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 34/194 (17%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTR-SLLMADIRCLPGMEGGPV 297
K G+ + V SPFG +SP F NSVS G + N R + SL + D RCLPG EG V
Sbjct: 221 KTGERISIVASPFGFISPTIFLNSVSSGIICNKIAARPYSHPSLFLTDARCLPGSEGAAV 280
Query: 298 FGEHAHFVGILIRPLR---QKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGN 354
F + I+ P+R +K+ + ++P + LLK A+ I + +
Sbjct: 281 FNSRGEVIAIVTPPIRAKDEKTPFNLASLLPTHTFL----EYLLKTDLVAKPLISNSVLS 336
Query: 355 LNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLN 414
L+ + SL S L QK ++ L+ D W SGVL++
Sbjct: 337 LSPLQTSL-----------------------SLLDRQK--HNIVLVKFKD-TWGSGVLIS 370
Query: 415 DQGLILTNAHLLEP 428
G ILTNAH+L P
Sbjct: 371 SNGYILTNAHILAP 384
>gi|66815843|ref|XP_641938.1| hypothetical protein DDB_G0279049 [Dictyostelium discoideum AX4]
gi|60469964|gb|EAL67946.1| hypothetical protein DDB_G0279049 [Dictyostelium discoideum AX4]
Length = 849
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 42/198 (21%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYP-PRSTTRSLLMADIRCLPGMEGGPV 297
+ G+ + VGSPFG +SP F NS+S G V NC S++ SL + D R LPG EG V
Sbjct: 291 RSGNSVYVVGSPFGFISPTMFLNSISNGIVCNCIQSSSSSSSSLFLIDARSLPGNEGSGV 350
Query: 298 FGEHAHFVGILIRPLRQKSGA---EIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGN 354
F + +G + P+R K+ + V+P + L P+
Sbjct: 351 FNKDGLLIGFIAPPIRSKNDKLPFTLSPVLPIHSFLPRIESQLSIYPK------------ 398
Query: 355 LNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKAL----ASVCLITIDDGVWASG 410
+ NSL C+ PIQ+++ S+ L+ + W SG
Sbjct: 399 -YRLSNSL--------SVSCFD------------PIQQSVNDCQNSIVLVQFKNS-WGSG 436
Query: 411 VLLNDQGLILTNAHLLEP 428
VL+++ G ILTNAHL+ P
Sbjct: 437 VLISESGYILTNAHLIIP 454
>gi|390343430|ref|XP_003725875.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Strongylocentrotus purpuratus]
Length = 637
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 35/215 (16%)
Query: 226 LKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD 285
LK +P+ +L + + A G+PF LSP F+NS+S G + + + + L+M D
Sbjct: 267 LKIVPSTSL----RLAQPVTACGTPFATLSPSIFYNSLSKGIIT-----KHSGQDLVMTD 317
Query: 286 IRCLPGMEGGPVF---GEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQ 342
RC+PG EGG +F +H + ++I PL KS W + ACS + +
Sbjct: 318 ARCMPGTEGGGLFVTDKKHRYLAAMIISPLCWKSNE-------WIGLTLACSMTAILDSL 370
Query: 343 NAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITI 402
I ++ G + SH + C ++P K SV L+ +
Sbjct: 371 QGLTSIDLSMIRSTYHG----YGSHSSHEMC----------LQNPEVDLKRFQSVVLLRV 416
Query: 403 DDGVWASGVLLND-QGLILTNAHLLEPWRFGKTTV 436
VW SGV++N+ +GLILT HL++ + + +V
Sbjct: 417 GT-VWGSGVIVNEKEGLILTCRHLVKGASYNQVSV 450
>gi|291222759|ref|XP_002731382.1| PREDICTED: trypsin domain containing 1-like [Saccoglossus
kowalevskii]
Length = 488
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 40/211 (18%)
Query: 240 RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFG 299
+G L+ + +PF + PM FFNS S G V+N +T L+M D RCLPG EGG V+
Sbjct: 186 QGQSLITIATPFASICPMVFFNSQSSGIVSNVAGNNNT---LIMTDARCLPGTEGGAVYT 242
Query: 300 -------EHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINK 352
EH + G+++ PL KS W + CS + N + K
Sbjct: 243 KISSTEVEHRYLTGLIVAPLCWKSNE-------WIGLTLVCSISEILHVLNQILKTTRLK 295
Query: 353 GNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVL 412
L + S +F I + Y + + +A+ V L+ VW SG+L
Sbjct: 296 RFLQNIDTSEIFYKCITHSKQSYGFG-----------VSEAIKRVVLVQA-GSVWGSGIL 343
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRNGV 443
+ + ILT H+ +SG RNG+
Sbjct: 344 VGND-TILTCRHV----------ISGARNGI 363
>gi|192451461|ref|NP_001122182.1| peroxisomal leader peptide-processing protease [Danio rerio]
gi|190339300|gb|AAI62169.1| Trypsin domain containing 1 [Danio rerio]
Length = 521
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 39/197 (19%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
K+G ++A GSPFG L P F N++S G V+N + +L++ D RCLPG EGG VF
Sbjct: 170 KKGCHVIACGSPFGGLCPDLFMNTISKGIVSNLAGDEN---ALILTDARCLPGTEGGGVF 226
Query: 299 ---GEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACS-DLLLKEPQNAEKEIHINKGN 354
G ++ VG++ PL KS W + CS L+LK E I K
Sbjct: 227 ISKGGTSYLVGLIASPLCWKSE-------EWIGLTLVCSVHLILKNMLQTEGSI---KET 276
Query: 355 LNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVC---LITIDDG-VWASG 410
L V +S ++NG+ ++PL + ++ ++ G +W SG
Sbjct: 277 LTGV------SSQLVNGS-----------LQAPLTANRGSGLELYPGVVLVETGWLWGSG 319
Query: 411 VLLNDQGLILTNAHLLE 427
VLLN Q L+LT H+++
Sbjct: 320 VLLN-QNLVLTCRHVVD 335
>gi|301612998|ref|XP_002936002.1| PREDICTED: peroxisomal leader peptide-processing protease isoform 1
[Xenopus (Silurana) tropicalis]
Length = 588
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 33/216 (15%)
Query: 218 AILGVSSYLKDL-PNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
A+L + S L D I P + ++G ++A GSPFG P F NS+S G ++N
Sbjct: 205 ALLKLRSPLSDRHKKITFVPSSMLEKGCTVIACGSPFGSFYPDIFLNSISKGIISNTAGD 264
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFG---EHAHFVGILIRPLRQKSGAEIQLVIPWEAIAT 331
R+ +L+ D RCLPG EGG +F + VGI++ PL K+ W +
Sbjct: 265 RNV---VLLTDARCLPGSEGGGIFAAERDRLCLVGIIVVPLCWKANE-------WVGLTV 314
Query: 332 ACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQ 391
ACS + E N K + + K A+ + + + + G C + V +
Sbjct: 315 ACSISHILE--NIIKSLSLTK----ALEENNIIATKV-EGFCSSDLKRVHKLTK------ 361
Query: 392 KALASVCLITIDDG-VWASGVLLNDQGLILTNAHLL 426
K +ASV L +D G VW SGVL+N + ++LT H++
Sbjct: 362 KQIASVVL--VDSGQVWGSGVLVNPK-VVLTCRHVV 394
>gi|301613000|ref|XP_002936003.1| PREDICTED: peroxisomal leader peptide-processing protease isoform 2
[Xenopus (Silurana) tropicalis]
Length = 586
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 105/216 (48%), Gaps = 33/216 (15%)
Query: 218 AILGVSSYLKDL-PNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
A+L + S L D I P + ++G ++A GSPFG P F NS+S G ++N
Sbjct: 205 ALLKLRSPLSDRHKKITFVPSSMLEKGCTVIACGSPFGSFYPDIFLNSISKGIISNTAGD 264
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFG---EHAHFVGILIRPLRQKSGAEIQLVIPWEAIAT 331
R+ +L+ D RCLPG EGG +F + VGI++ PL K+ W +
Sbjct: 265 RNV---VLLTDARCLPGSEGGGIFAAERDRLCLVGIIVVPLCWKAN-------EWVGLTV 314
Query: 332 ACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQ 391
ACS + E N K + + K A+ + + + + G C + V +
Sbjct: 315 ACSISHILE--NIIKSLSLTK----ALEENNIIATKV-EGFCSSDLKRVHKLTK------ 361
Query: 392 KALASVCLITIDDG-VWASGVLLNDQGLILTNAHLL 426
K +ASV L +D G VW SGVL+N + ++LT H++
Sbjct: 362 KQIASVVL--VDSGQVWGSGVLVNPK-VVLTCRHVV 394
>gi|327267618|ref|XP_003218596.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Anolis carolinensis]
Length = 561
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
++GD L+A GSPFG P F N+ S G V+N L++ D RCLPG EGG VF
Sbjct: 209 RKGDPLIACGSPFGAFCPDIFMNTFSKGIVSN---TSGEGNVLILTDARCLPGTEGGGVF 265
Query: 299 G---EHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACS-DLLLKEPQNAEKEIHINKGN 354
H VGI++ PL K+ W + C+ D +L E HI G
Sbjct: 266 AVSKNGFHLVGIIVAPLCWKANE-------WVGLTLVCAIDCIL------ESIGHILSG- 311
Query: 355 LNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLN 414
F L+ H R L IQ+ LA+V L+ W SGV+++
Sbjct: 312 ------PPWFCKTWLHPMALVTKPHYGPVARDGL-IQQMLAAVVLVECGP-TWGSGVMVS 363
Query: 415 DQGLILTNAH 424
+ L+LT H
Sbjct: 364 PR-LVLTCRH 372
>gi|47223263|emb|CAF98647.1| unnamed protein product [Tetraodon nigroviridis]
Length = 432
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDL-----PNIALTPLNKRGDLLLAVGSPFGVLSP 256
EE L ++ S A+L +S + L P + + L K G ++A GSPFG L P
Sbjct: 46 EEDRELMRDARFLSWFAVLKISEKVDGLRPAPVPWRSCSSLQK-GHPVIACGSPFGSLCP 104
Query: 257 MHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF----GEHAHFVGILIRPL 312
F N++S G ++N S ++++ D RCLPG EGG VF AH +G+++ P
Sbjct: 105 DLFINTLSRGIISNLAGEDS---AVILTDARCLPGTEGGGVFVVKSTGQAHLIGVIVSPF 161
Query: 313 RQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHILNGA 372
K+ I L + + + L Q +++ +N G SL +H
Sbjct: 162 CWKANEWIGLTLVCSVQSLFRNVLRCASLQGVLRDVWLNPGQPRL---SLSTTAH----- 213
Query: 373 CCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFG 432
P +VCL+ VW SGV + Q L++T H++ G
Sbjct: 214 ---------------EPGIGKYPTVCLVE-SGSVWGSGVAVTPQ-LVVTCRHVVN----G 252
Query: 433 KTTV 436
K+TV
Sbjct: 253 KSTV 256
>gi|363735195|ref|XP_001232633.2| PREDICTED: peroxisomal leader peptide-processing protease [Gallus
gallus]
Length = 493
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
++G LLA G+PFG L P F N++S G ++N P+ R+LL+ D RCLPG +GGPV
Sbjct: 153 RKGAALLACGTPFGALCPELFLNALSTGVLSNATGPQ---RALLLTDARCLPGTQGGPVL 209
Query: 299 G 299
Sbjct: 210 A 210
>gi|16877139|gb|AAH16840.1| TYSND1 protein, partial [Homo sapiens]
Length = 435
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 72 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 125
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSG 317
CLPG EGG VF V +++ PL K+G
Sbjct: 126 CLPGTEGGGVFTARPAGALVALVVAPLCWKAG 157
>gi|410247894|gb|JAA11914.1| trypsin domain containing 1 [Pan troglodytes]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|426364998|ref|XP_004049577.1| PREDICTED: peroxisomal leader peptide-processing protease isoform 1
[Gorilla gorilla gorilla]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|410349233|gb|JAA41220.1| trypsin domain containing 1 [Pan troglodytes]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|426365000|ref|XP_004049578.1| PREDICTED: peroxisomal leader peptide-processing protease isoform 2
[Gorilla gorilla gorilla]
Length = 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDL-----PNIALTPLNK--RGDLLLAVGSPFGVL 254
EE+ L ++ A+LGV +++ P +A++PL +G LL GSPFG
Sbjct: 174 EEADQL----RALGWFALLGVRLGQEEVEEERGPAMAVSPLGAVPKGAPLLVCGSPFGAF 229
Query: 255 SPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEH--AHFVGILIRPL 312
P F N++S G ++N P LL+ D RCLPG EGG VF V +++ PL
Sbjct: 230 CPDIFLNTLSCGVLSNVAGP------LLLTDARCLPGTEGGGVFTARPAGALVALVVAPL 283
Query: 313 RQKSGAEIQLVI 324
K+G + +
Sbjct: 284 CWKAGEWVGFTL 295
>gi|297686760|ref|XP_002820908.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal leader
peptide-processing protease-like [Pongo abelii]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|114630967|ref|XP_001170770.1| PREDICTED: peroxisomal leader peptide-processing protease isoform 3
[Pan troglodytes]
gi|410209534|gb|JAA01986.1| trypsin domain containing 1 [Pan troglodytes]
gi|410301260|gb|JAA29230.1| trypsin domain containing 1 [Pan troglodytes]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|94400921|ref|NP_775826.2| peroxisomal leader peptide-processing protease isoform a [Homo
sapiens]
gi|146325807|sp|Q2T9J0.3|TYSD1_HUMAN RecName: Full=Peroxisomal leader peptide-processing protease;
AltName: Full=Trypsin domain-containing protein 1;
Contains: RecName: Full=Peroxisomal leader
peptide-processing protease, 15 kDa form; Contains:
RecName: Full=Peroxisomal leader peptide-processing
protease, 45 kDa form
gi|119574762|gb|EAW54377.1| hCG2024793, isoform CRA_c [Homo sapiens]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|332834250|ref|XP_003312646.1| PREDICTED: peroxisomal leader peptide-processing protease [Pan
troglodytes]
Length = 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDL-----PNIALTPLNK--RGDLLLAVGSPFGVL 254
EE+ L ++ A+LGV +++ P +A++PL +G LL GSPFG
Sbjct: 174 EEADQL----RALGWFALLGVRLGQEEVEEERGPAMAVSPLGAVPKGAPLLVCGSPFGAF 229
Query: 255 SPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEH--AHFVGILIRPL 312
P F N++S G ++N P LL+ D RCLPG EGG VF V +++ PL
Sbjct: 230 CPDIFLNTLSCGVLSNVAGP------LLLTDARCLPGTEGGGVFTARPAGALVALVVAPL 283
Query: 313 RQKSGAEIQLVI 324
K+G + +
Sbjct: 284 CWKAGEWVGFTL 295
>gi|94400923|ref|NP_001035363.1| peroxisomal leader peptide-processing protease isoform b [Homo
sapiens]
gi|119574760|gb|EAW54375.1| hCG2024793, isoform CRA_a [Homo sapiens]
Length = 398
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDL-----PNIALTPLNK--RGDLLLAVGSPFGVL 254
EE+ L ++ A+LGV +++ P +A++PL +G LL GSPFG
Sbjct: 174 EEADQL----RALGWFALLGVRLGQEEVEEERGPAMAVSPLGAVPKGAPLLVCGSPFGAF 229
Query: 255 SPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEH--AHFVGILIRPL 312
P F N++S G ++N P LL+ D RCLPG EGG VF V +++ PL
Sbjct: 230 CPDIFLNTLSCGVLSNVAGP------LLLTDARCLPGTEGGGVFTARPAGALVALVVAPL 283
Query: 313 RQKSGAEIQLVI 324
K+G + +
Sbjct: 284 CWKAGEWVGFTL 295
>gi|112180747|gb|AAI11502.2| Trypsin domain containing 1 [Homo sapiens]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V +++ PL K+G + +
Sbjct: 257 CLPGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|410901208|ref|XP_003964088.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Takifugu rubripes]
Length = 523
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 44/242 (18%)
Query: 201 MEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFF 260
M ++ LS + +R + G+ S + +P + + L K GD +LA GSPFG L F
Sbjct: 139 MRDARFLSWFAILKTREKVDGLRS--ESIPWQSCSSLQK-GDPVLACGSPFGSLCLDLFI 195
Query: 261 NSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF---GEHAHFVGILIRPLRQKSG 317
+++S G V+N ++++ D RCLPG EGG VF H +G+++ P K+
Sbjct: 196 STLSRGIVSNL---TGEDNAVILTDARCLPGTEGGGVFVVKSTDVHLIGVIVSPFCWKAN 252
Query: 318 AEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFN---SHILNGACC 374
W + CS Q+ + I + G+L LL++ S + + C
Sbjct: 253 E-------WIGLTLVCS------VQSIFRNI-VRCGSLQG----LLWDVWPSPVQSSLCM 294
Query: 375 YKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKT 434
H + P +VCL+ VW SGV + Q L++T H++ G+
Sbjct: 295 STMIHESRVAKYP--------TVCLVE-SGSVWGSGVAVTPQ-LVMTCRHVVN----GRL 340
Query: 435 TV 436
TV
Sbjct: 341 TV 342
>gi|126272274|ref|XP_001374746.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Monodelphis domestica]
Length = 561
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +++ P +G LL GSPFG P F NS+S G ++N P LL+ D R
Sbjct: 196 PRLSVVPAASLPKGAPLLTCGSPFGAFCPDIFLNSLSRGVLSNAAGP------LLLTDAR 249
Query: 288 CLPGMEGGPVFGEHAHFVGILIRPL 312
CLPG EG VF H V ++ PL
Sbjct: 250 CLPGTEGAGVFSTHGALVALVAAPL 274
>gi|390472649|ref|XP_003734520.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal leader
peptide-processing protease [Callithrix jacchus]
Length = 520
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 220 LGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRST 277
LG + P +A+ PL +G LL GSPFG P F N++S G ++N P
Sbjct: 147 LGQEEAEESGPAVAVAPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSRGVLSNVAGP--- 203
Query: 278 TRSLLMADIRCLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
LL+ D RCLPG EGG VF V ++ PL KS + L +
Sbjct: 204 ---LLLTDARCLPGTEGGGVFTARPAGTLVALVAAPLCWKSREWVGLTL 249
>gi|20988859|gb|AAH30242.1| Trypsin domain containing 1 [Homo sapiens]
Length = 398
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 232 IALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCL 289
+A++PL +G LL GSPFG P F N++S G ++N P LL+ D RCL
Sbjct: 205 MAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDARCL 258
Query: 290 PGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
PG EGG VF V +++ PL K+G + +
Sbjct: 259 PGTEGGGVFTARPAGALVALVVAPLCWKAGEWVGFTL 295
>gi|335301745|ref|XP_001927378.2| PREDICTED: peroxisomal leader peptide-processing protease isoform 1
[Sus scrofa]
Length = 568
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 205 PIVAVAPLGAVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 258
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKS 316
CLPG EGG VF V ++ PL K+
Sbjct: 259 CLPGTEGGGVFAARPAGTLVALVAAPLCWKA 289
>gi|395820587|ref|XP_003783645.1| PREDICTED: peroxisomal leader peptide-processing protease [Otolemur
garnettii]
Length = 566
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAVAVAPLGAVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVF 298
CLPG EGG VF
Sbjct: 257 CLPGTEGGGVF 267
>gi|149038718|gb|EDL93007.1| trypsin domain containing 1 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 505
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPAVTVAPLGAVAKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVFG 299
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVFA 269
>gi|149236099|ref|XP_001523927.1| hypothetical protein LELG_04740 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452303|gb|EDK46559.1| hypothetical protein LELG_04740 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 530
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 108/239 (45%), Gaps = 49/239 (20%)
Query: 93 EGQPELITGSQIDFLVEGKLRSEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEA 152
+G+ ++T + I + + K+ + H+++ + EW +L+ +VD+P++ LA +
Sbjct: 49 KGKDFILTINHIPNISQYKIYTS-HHDNLGLDNVEWHQIKLLKVVDVPLNDLA-----QL 102
Query: 153 SSGLPEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSK 212
S+G G+SL P + ++ G V I ++ SL + + +N L
Sbjct: 103 SNG--------GFSLLPRDYTA----GNVSIMILTSPSSL----KTIKATKIANQQLQVA 146
Query: 213 STSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
VA GD++ + SPF + + F N +SMG+V
Sbjct: 147 PVEEVA---------------------GGDIIKIISSPFNATNLLVFRNFISMGNVV--- 182
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIA 330
+ + DI+ L M G V +++ +G+++ LR+K+G E+ ++IPW +A
Sbjct: 183 --YNLHDAFYFTDIKYLDDMNGAIVLNKNSQVIGLVLGCLRKKNGDGELTVIIPWSKVA 239
>gi|157821809|ref|NP_001102402.1| peroxisomal leader peptide-processing protease [Rattus norvegicus]
gi|149038717|gb|EDL93006.1| trypsin domain containing 1 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|169642578|gb|AAI60877.1| Trypsin domain containing 1 [Rattus norvegicus]
Length = 567
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPAVTVAPLGAVAKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVF 298
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVF 268
>gi|403273806|ref|XP_003928690.1| PREDICTED: peroxisomal leader peptide-processing protease [Saimiri
boliviensis boliviensis]
Length = 566
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAVAVAPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSRGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V ++ PL KS + L +
Sbjct: 257 CLPGTEGGGVFTARPAGTLVALVAAPLCWKSREWVGLTL 295
>gi|348575971|ref|XP_003473761.1| PREDICTED: peroxisomal leader peptide-processing protease [Cavia
porcellus]
Length = 570
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P + + PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 208 PAMTVAPLGAVAKGTPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP------LLLTDAR 261
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKSGAEIQLVI 324
CLPG EGG VF V ++ PL K+ + L +
Sbjct: 262 CLPGTEGGGVFAARPAGSLVALVAAPLCWKAREWVGLTL 300
>gi|335301747|ref|XP_003359275.1| PREDICTED: peroxisomal leader peptide-processing protease isoform 2
[Sus scrofa]
Length = 400
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 205 PIVAVAPLGAVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 258
Query: 288 CLPGMEGGPVFGEH--AHFVGILIRPLRQKS 316
CLPG EGG VF V ++ PL K+
Sbjct: 259 CLPGTEGGGVFAARPAGTLVALVAAPLCWKA 289
>gi|441418800|ref|NP_001259019.1| peroxisomal leader peptide-processing protease isoform b [Mus
musculus]
Length = 521
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPVVTVAPLGAVVKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVF 298
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVF 268
>gi|431904149|gb|ELK09571.1| Peroxisomal leader peptide-processing protease [Pteropus alecto]
Length = 565
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 232 IALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCL 289
+A+ PL +G LLA GSPFG P F N+VS G ++N T LL+ D RCL
Sbjct: 205 LAVAPLGTVPKGAPLLACGSPFGAFCPDIFLNTVSGGVLSN------ATGPLLLTDARCL 258
Query: 290 PGMEGGPVFGEH--AHFVGILIRPLRQKS 316
PG +GG VF V ++ PL KS
Sbjct: 259 PGTQGGGVFSARPPGALVALVAAPLCWKS 287
>gi|441418802|ref|NP_001259020.1| peroxisomal leader peptide-processing protease isoform c [Mus
musculus]
Length = 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPVVTVAPLGAVVKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVF 298
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVF 268
>gi|441418804|ref|NP_001259021.1| peroxisomal leader peptide-processing protease isoform d [Mus
musculus]
gi|148700182|gb|EDL32129.1| mCG15765, isoform CRA_b [Mus musculus]
Length = 506
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPVVTVAPLGAVVKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVF 298
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVF 268
>gi|254675122|ref|NP_082188.1| peroxisomal leader peptide-processing protease isoform a [Mus
musculus]
gi|81881731|sp|Q9DBA6.1|TYSD1_MOUSE RecName: Full=Peroxisomal leader peptide-processing protease;
AltName: Full=Trypsin domain-containing protein 1;
Contains: RecName: Full=Peroxisomal leader
peptide-processing protease, 10 kDa form; Contains:
RecName: Full=Peroxisomal leader peptide-processing
protease, 49 kDa form
gi|12836742|dbj|BAB23793.1| unnamed protein product [Mus musculus]
gi|74181882|dbj|BAE32642.1| unnamed protein product [Mus musculus]
gi|113912002|gb|AAI19321.2| Tysnd1 protein [Mus musculus]
gi|148700181|gb|EDL32128.1| mCG15765, isoform CRA_a [Mus musculus]
Length = 568
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPVVTVAPLGAVVKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVF 298
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVF 268
>gi|426255684|ref|XP_004021478.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal leader
peptide-processing protease [Ovis aries]
Length = 572
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PVLAVAPLGDVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVF 298
CLPG EGG VF
Sbjct: 257 CLPGTEGGGVF 267
>gi|440898746|gb|ELR50174.1| Peroxisomal leader peptide-processing protease [Bos grunniens
mutus]
Length = 522
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G LLA GSPFG P F N++S G ++N P LL+ D R
Sbjct: 145 PVLAVAPLGDVPKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 198
Query: 288 CLPGMEGGPVFGEH 301
CLPG EGG VF
Sbjct: 199 CLPGTEGGGVFASR 212
>gi|332218144|ref|XP_003258218.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal leader
peptide-processing protease [Nomascus leucogenys]
Length = 565
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAMAVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVF 298
CLPG EGG VF
Sbjct: 257 CLPGTEGGGVF 267
>gi|297301227|ref|XP_002805742.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Macaca mulatta]
Length = 566
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDL-----PNIALTPLNK--RGDLLLAVGSPFGVL 254
EE+ L +S A+LGV +++ P + ++PL +G LL GSPFG
Sbjct: 174 EEADQL----RSLGWFALLGVRLGQEEVEEERGPAVTVSPLGAVPKGTPLLVCGSPFGAF 229
Query: 255 SPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
P F N++S G ++N P LL+ D RCLPG EGG VF
Sbjct: 230 CPDIFLNTLSCGVLSNVAGP------LLLTDARCLPGTEGGGVF 267
>gi|196011255|ref|XP_002115491.1| hypothetical protein TRIADDRAFT_59478 [Trichoplax adhaerens]
gi|190581779|gb|EDV21854.1| hypothetical protein TRIADDRAFT_59478 [Trichoplax adhaerens]
Length = 600
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 198 PFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPN-----IALTPLNKRGDLLLAVGSPFG 252
P A E SN ++ +L ++ K N +A L KRGD++ + +PFG
Sbjct: 135 PLAEENHSNQKSDPSVITQFLLLQITDTNKKFLNSDPIEMADRRLLKRGDVVEVISTPFG 194
Query: 253 VLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGE-----HAHFVGI 307
P+ F+NS + G ++N ++ L + D RCL G EGG V + A VG+
Sbjct: 195 DSYPLIFYNSSTKGIISNICGKKN---QLFLTDARCLAGSEGGAVVCKLAGQSKASLVGV 251
Query: 308 LIRP--LRQKSGAEIQLVIPWEAIATA 332
++ P + LV+P + I T+
Sbjct: 252 VMSPFCFKDTEWTGFTLVVPIDLILTS 278
>gi|260829953|ref|XP_002609926.1| hypothetical protein BRAFLDRAFT_85874 [Branchiostoma floridae]
gi|229295288|gb|EEN65936.1| hypothetical protein BRAFLDRAFT_85874 [Branchiostoma floridae]
Length = 569
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 195 SHRPFAMEESSNLSLMSK-STSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPF 251
SH+ A++ M++ S S A+L + K + A+ + + G ++AVG+PF
Sbjct: 170 SHQIEAVQSCVKTDWMAEVSLSWFALLKLKESEKGAESSAVVGVEQAQIGSPVMAVGTPF 229
Query: 252 GVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAH----FVGI 307
GVL P F NS++ G V N +L++ D RCLPG EGGP+ +G+
Sbjct: 230 GVLCPSVFMNSLAKGIVCNT---AGKGGALILTDARCLPGTEGGPLLTVDRDGKWMLLGL 286
Query: 308 LIRPLRQKSGAEIQL---------------VIPWEAIATACSDLLLKEP 341
+ PL K+ I L ++PW I A ++EP
Sbjct: 287 VAAPLCWKANEWIGLSLVCSFHAVLDSLAHLVPWPLIPAAAVIHSIQEP 335
>gi|387540404|gb|AFJ70829.1| peroxisomal leader peptide-processing protease isoform a [Macaca
mulatta]
Length = 566
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P + ++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAVTVSPLGAVPKGTPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVF 298
CLPG EGG VF
Sbjct: 257 CLPGTEGGGVF 267
>gi|402880586|ref|XP_003903880.1| PREDICTED: peroxisomal leader peptide-processing protease [Papio
anubis]
Length = 566
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P + ++PL +G LL GSPFG P F N++S G ++N P LL+ D R
Sbjct: 203 PAVTVSPLGAVPKGAPLLVCGSPFGAFCPDIFLNTLSCGVLSNVAGP------LLLTDAR 256
Query: 288 CLPGMEGGPVF 298
CLPG EGG VF
Sbjct: 257 CLPGTEGGGVF 267
>gi|444725145|gb|ELW65723.1| Peroxisomal leader peptide-processing protease [Tupaia chinensis]
Length = 565
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 240 RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFG 299
+G LLA GSPFG P F N++S G ++N P LL+ D RCLPG EGG VF
Sbjct: 217 KGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP------LLLTDARCLPGTEGGGVFA 270
Query: 300 EH--AHFVGILIRPLRQKSGAEIQLVI 324
V + PL K+ + L +
Sbjct: 271 ARPAGALVAFVAAPLCWKAREWVGLTL 297
>gi|440804609|gb|ELR25486.1| trypsin domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 580
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 29/98 (29%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA----------------------------- 269
+ GD L GSP+G+L+P FFN ++ G V+
Sbjct: 134 REGDGLHVYGSPYGLLAPHVFFNCLATGVVSGRLEAPPPLVHDDHHDHDHGHDDDDQAKK 193
Query: 270 NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ P +T LL+ D RC+PG EGGP F + F G+
Sbjct: 194 SAQPQPATRFPLLLTDARCIPGCEGGPAFNDQRQFAGL 231
>gi|348529100|ref|XP_003452052.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Oreochromis niloticus]
Length = 515
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 229 LPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRC 288
+P + PL K G ++A GSPFG L F +++S G ++N ++++ D RC
Sbjct: 156 IPWKSSVPLQK-GCSVVACGSPFGSLCLDLFISTLSRGIISNLA---GEDNAVILTDARC 211
Query: 289 LPGMEGGPVF----GEHAHFVGILIRPLRQKSGAEIQLVI 324
LPG EGG +F H +G+++ P K+ I L +
Sbjct: 212 LPGTEGGGLFVVKGAGSVHLIGLIVSPFGWKANEWIGLTL 251
>gi|290994480|ref|XP_002679860.1| predicted protein [Naegleria gruberi]
gi|284093478|gb|EFC47116.1| predicted protein [Naegleria gruberi]
Length = 476
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 108/276 (39%), Gaps = 57/276 (20%)
Query: 189 KISLMESHRPFAMEESSN------LSLMSKSTSRVAIL----GVSSYLKDLPNIALT-PL 237
K S E H F ++ N SL++ ST V + + +Y +P++
Sbjct: 206 KSSFKEPHSKFDDQQMPNNSVEIPSSLITPSTMAVFKIKNCESLKNYAVSIPDVEYNGDF 265
Query: 238 NKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSL-LMADIRCLPGMEGGP 296
+GD L V SPFG+LSP N ++ G + N + +++L ++ D + PG EG P
Sbjct: 266 LSQGDDLFIVSSPFGLLSPHSLSNHLTKGIICNKINNNNNSQNLAIITDCQIHPGSEGAP 325
Query: 297 VFGE---HAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLKEPQNAEKEIHINK 352
VF VG P+R S + + +VI + + + N +
Sbjct: 326 VFARVITQTKCVGFCTLPVRSISSSNGLNIVISIDPFVKLLREKFIGTSPNIILPVMDKS 385
Query: 353 GNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVL 412
++ + + + LI I++ WA+G+L
Sbjct: 386 NDIYNITRN----------------------------------KIALIIINN-TWATGIL 410
Query: 413 LNDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQPE 448
L G I+TN+H++ P+ K +G F P+
Sbjct: 411 LTHTGYIMTNSHVMAPFMQQK------EDGTFFLPD 440
>gi|187927027|ref|YP_001893372.1| protease Do [Ralstonia pickettii 12J]
gi|241665356|ref|YP_002983715.1| protease Do [Ralstonia pickettii 12D]
gi|187728781|gb|ACD29945.1| protease Do [Ralstonia pickettii 12J]
gi|240867383|gb|ACS65043.1| protease Do [Ralstonia pickettii 12D]
Length = 492
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +S+ K+LP + + +P N K G+ ++A+GSP+G F N+V+ G S +
Sbjct: 169 SDVAVLRISA--KNLPVVQIGSPANTKVGEPVVAIGSPYG------FENTVTAGIVSAKS 220
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
P T + D+ PG GGP+F +H +GI + Q G + + IP +
Sbjct: 221 RSLPDDTYVPFIQTDVAVNPGNSGGPLFNQHGEVIGINSQIYSQTGGYQGLSFAIPID 278
>gi|50554225|ref|XP_504521.1| YALI0E28743p [Yarrowia lipolytica]
gi|49650390|emb|CAG80124.1| YALI0E28743p [Yarrowia lipolytica CLIB122]
Length = 525
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 249 SPFGVLSPMHFF------NSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHA 302
SPF +++P F N+ +G AN P+ T S++ +DIR L GMEGG V H
Sbjct: 177 SPFVLVNPAVFMAYTVRGNASYLGYTANFGRPQ-TKASVIFSDIRFLEGMEGGVVTDTHG 235
Query: 303 HFVGILIRPLRQKSG-AEIQLVIPWEAI 329
+G+++ L + G + +++PW+ +
Sbjct: 236 KLIGMVVGCLSKAGGEGTLTVIVPWQEL 263
>gi|118363971|ref|XP_001015208.1| hypothetical protein TTHERM_00509040 [Tetrahymena thermophila]
gi|89296975|gb|EAR94963.1| hypothetical protein TTHERM_00509040 [Tetrahymena thermophila
SB210]
Length = 590
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 41/199 (20%)
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT------RSLLMADIRC 288
T + +G + + SPFG+LS + N + G +AN + + + + +LM D+
Sbjct: 224 TKMPTQGQQITTISSPFGILSSQLYHNILGQGVIANVFDIEANSKLKKFHKHILMLDMIN 283
Query: 289 LPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEI 348
G EGG V E + +G+++ + + + + A + +L +K
Sbjct: 284 FGGKEGGLVLDEEQNVIGMMLPSFSFQGANSV-----YFSFAISAKTVLELAATRLDKFK 338
Query: 349 HINKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWA 408
+ K + + L K L ++CLI G +
Sbjct: 339 SVKK-----------------------------EQPKEFLETNKFLQNICLIQTSYGHF- 368
Query: 409 SGVLLNDQGLILTNAHLLE 427
SG+++ND+G IL+ H L+
Sbjct: 369 SGIIINDEGYILSVRHGLD 387
>gi|89902581|ref|YP_525052.1| peptidase S1C, Do [Rhodoferax ferrireducens T118]
gi|89347318|gb|ABD71521.1| Peptidase S1C, Do [Rhodoferax ferrireducens T118]
Length = 501
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 14/127 (11%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCY 272
VA+L + + KDLP I + K G+ +LA+GSPFG F NSV+ G V+
Sbjct: 179 VAVLKIDA--KDLPTITVGTTRDLKVGEWVLAIGSPFG------FENSVTAGVVSAKGRS 230
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIAT 331
P + + D+ PG GGP+F VGI + Q G + + IP E +A+
Sbjct: 231 LPDDSFVPFIQTDVAVNPGNSGGPLFNTRGQVVGINSQIYSQSGGYQGLSFAIPIE-LAS 289
Query: 332 ACSDLLL 338
D ++
Sbjct: 290 KVKDQIV 296
>gi|432904770|ref|XP_004077408.1| PREDICTED: peroxisomal leader peptide-processing protease-like
[Oryzias latipes]
Length = 526
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
++G + A GSPFG L F +++S G ++N ++++ D RCLPG EGG +F
Sbjct: 176 EKGTPVFACGSPFGSLCLDLFISTLSRGIISNLA---GEDNAVILTDARCLPGTEGGGLF 232
Query: 299 ----GEHAHFVGILIRPL 312
+ A +G+++ P
Sbjct: 233 VVKGADAASLIGLIVSPF 250
>gi|338716845|ref|XP_001917709.2| PREDICTED: LOW QUALITY PROTEIN: peroxisomal leader
peptide-processing protease [Equus caballus]
Length = 568
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 230 PNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIR 287
P +A+ PL +G + PFG P F N++S G ++N P LL+ D R
Sbjct: 205 PAVAVAPLGAVPKGRAAAGLRLPFGAFCPDIFLNTLSRGVLSNSAGP------LLLTDAR 258
Query: 288 CLPGMEGGPVF 298
CLPG EGG VF
Sbjct: 259 CLPGTEGGGVF 269
>gi|309779356|ref|ZP_07674118.1| serine protease [Ralstonia sp. 5_7_47FAA]
gi|404395473|ref|ZP_10987274.1| protease Do [Ralstonia sp. 5_2_56FAA]
gi|308921914|gb|EFP67549.1| serine protease [Ralstonia sp. 5_7_47FAA]
gi|348616228|gb|EGY65730.1| protease Do [Ralstonia sp. 5_2_56FAA]
Length = 493
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +S+ K+LP + + +P N K G+ +LA+GSP+G F N+V+ G S +
Sbjct: 170 SDVAVLRISA--KNLPVVQIGSPANTKVGEPVLAIGSPYG------FENTVTAGIVSAKS 221
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + +GI
Sbjct: 222 RSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGI 258
>gi|307108913|gb|EFN57152.1| hypothetical protein CHLNCDRAFT_143502 [Chlorella variabilis]
Length = 763
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 21/79 (26%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTR--------------------- 279
G L AVG+PFG L+P HF +S G V+ P R
Sbjct: 259 GQPLAAVGAPFGALAPNHFTAFLSTGVVSAAVPRAEDGRCSSSHGSSAGAAGGPAAYAPA 318
Query: 280 SLLMADIRCLPGMEGGPVF 298
+LL++D+RC PGMEGGPVF
Sbjct: 319 ALLLSDMRCSPGMEGGPVF 337
>gi|430807871|ref|ZP_19434986.1| endopeptidase [Cupriavidus sp. HMR-1]
gi|429499841|gb|EKZ98241.1| endopeptidase [Cupriavidus sp. HMR-1]
Length = 487
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + +A++ + + K+LP + L P R G+ +LA+GSP+G F N+V+ G
Sbjct: 158 LGSDPQTDIAVIRIDA--KNLPTVRLGDPSKTRVGEPVLAIGSPYG------FENTVTAG 209
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F + +GI + Q G + +
Sbjct: 210 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFA 269
Query: 324 IPWEAIATACSDLLL 338
IP +AT D L+
Sbjct: 270 IPIN-VATKVEDQLV 283
>gi|73539383|ref|YP_299750.1| peptidase S1C, Do [Ralstonia eutropha JMP134]
gi|72122720|gb|AAZ64906.1| Peptidase S1C, Do [Ralstonia eutropha JMP134]
Length = 488
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 29/242 (11%)
Query: 136 LVDIPVSSLALQSLMEASSGLPEHE--WEVGWSLAPYNNSSQPLMGVVKT-----SIESN 188
+V+I V++ A ++ M+A SG+ + ++ P Q +VK + +
Sbjct: 69 VVNISVTARAQRTAMQAPSGMDPDDPLFQFFKRFGPQFQGPQSGQQLVKGLGSGFIVSPD 128
Query: 189 KISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYL---------KDLPNIAL-TPLN 238
+ L +H +E + + L + + +LG KDLP + L P
Sbjct: 129 GLILTNAHVVDGAQEVT-VKLTDRREFKAKVLGTDPQTDVAVIRIDAKDLPTVRLGDPAR 187
Query: 239 -KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGG 295
K G+ +LA+GSP+G F N+V+ G S + P T + D+ PG GG
Sbjct: 188 VKVGEPVLAIGSPYG------FENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNPGNSGG 241
Query: 296 PVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGN 354
P+F + +GI + Q G + + IP +AT L+ + + I+
Sbjct: 242 PLFNQRGEVIGINSQIYSQTGGYQGLSFAIPIN-VATKVEQQLVAHGKVTRGRLGISVQE 300
Query: 355 LN 356
+N
Sbjct: 301 VN 302
>gi|335428285|ref|ZP_08555202.1| putative membrane serine protease Do [Haloplasma contractile
SSD-17B]
gi|335428391|ref|ZP_08555307.1| putative membrane serine protease Do [Haloplasma contractile
SSD-17B]
gi|334892778|gb|EGM31006.1| putative membrane serine protease Do [Haloplasma contractile
SSD-17B]
gi|334892973|gb|EGM31197.1| putative membrane serine protease Do [Haloplasma contractile
SSD-17B]
Length = 700
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 209 LMSKSTSRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + + +A++ +++ KDLP N+ T K G+ +A+GSP G ++ SV+ G
Sbjct: 462 LGSDAKTDLAVIRITT-TKDLPVLNMRDTSTLKLGETAIAIGSPLG----FEYYGSVTTG 516
Query: 267 SVA--NCYPPRST-------TRSLLMA-DIRCLPGMEGGPVFGEHAHFVGILIRPLRQKS 316
++ + Y T T S+L+ D+ PG GG + ++ + +GI + + ++
Sbjct: 517 VISGLDRYVAVDTDNDGQVDTESVLIQHDVAISPGNSGGALIDQNGNLIGINVLKIVEEK 576
Query: 317 GAEIQLVIPWEAIATACSDL 336
+ + IP + SD+
Sbjct: 577 VSNMGFAIPIRTVKRVVSDI 596
>gi|374371993|ref|ZP_09629885.1| periplasmic protease [Cupriavidus basilensis OR16]
gi|373096455|gb|EHP37684.1| periplasmic protease [Cupriavidus basilensis OR16]
Length = 485
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + + VA++ + + KDLP + L P R G+ +LA+GSP+G F N+V+ G
Sbjct: 156 LGADAQTDVAVIKIDA--KDLPTVRLGDPSRVRVGEPVLAIGSPYG------FENTVTGG 207
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F + +GI + Q G + +
Sbjct: 208 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFS 267
Query: 324 IPWEAIATACSDLL 337
IP + S L+
Sbjct: 268 IPIDVATKVQSQLV 281
>gi|405959222|gb|EKC25279.1| Peroxisomal leader peptide-processing protease [Crassostrea gigas]
Length = 653
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 45/200 (22%)
Query: 238 NKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPV 297
N GD + + +PFG L+P F NS S G ++N + LLM D RC+PG EGG +
Sbjct: 239 NYIGDPVEIMSTPFGGLNPDVFLNSRSEGILSNMA---GKNKVLLMTDARCVPGSEGGLL 295
Query: 298 FGEHAH-------FVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
+ +G++I L ++ W ++ AC+ L + A + I +
Sbjct: 296 LERNNSSDSYDRPVIGVMIATLCWRNNE-------WVGLSMACA---LPDILTAMEAIPV 345
Query: 351 NKGNLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASG 410
+++ ++L+ NS +S Q + SV LI++ G W SG
Sbjct: 346 ---SISPTVSNLVLNS------------------KSDPAFQNLVNSVPLISV-RGSWGSG 383
Query: 411 VLLNDQG---LILTNAHLLE 427
+ QG ++LT H+++
Sbjct: 384 FSVGIQGNEVILLTCNHVVK 403
>gi|344198525|ref|YP_004782851.1| protease Do [Acidithiobacillus ferrivorans SS3]
gi|343773969|gb|AEM46525.1| protease Do [Acidithiobacillus ferrivorans SS3]
Length = 505
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 227 KDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLL 282
KDLP + L + K G LLAVG+PFG F+N+V+ G V+ N P +
Sbjct: 180 KDLPTVPLGNSDDMKVGQWLLAVGAPFG------FYNTVTQGVVSAMNRPLPDDEYIPFI 233
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGI 307
+D+ PG GGP+F VGI
Sbjct: 234 QSDVPINPGNSGGPLFNMKGQVVGI 258
>gi|338997146|ref|ZP_08635849.1| protease Do [Halomonas sp. TD01]
gi|338765980|gb|EGP20909.1| protease Do [Halomonas sp. TD01]
Length = 471
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA- 269
S + + VA+L V + + N+ + K G+ + A+GSPFG F +SVS G V+
Sbjct: 139 SDTQTDVALLKVDANNLPVLNLGDSDELKVGEWVAAIGSPFG------FDHSVSAGIVSA 192
Query: 270 -NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWE 327
N PR + D+ PG GGP+F VGI + L + G + IP
Sbjct: 193 INRTLPRDVYVPFIQTDVAINPGNSGGPLFNLEGEVVGINSQILTRSGGFMGLSFAIPIN 252
Query: 328 AIATACSDLLLKEPQNAEKEIHINKG 353
+A +D L ++ H+N+G
Sbjct: 253 -VAMDVADQL-------REDGHVNRG 270
>gi|149926515|ref|ZP_01914776.1| Peptidase S1C, Do [Limnobacter sp. MED105]
gi|149824878|gb|EDM84092.1| Peptidase S1C, Do [Limnobacter sp. MED105]
Length = 510
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S S + +A+L + + K+LP+ L + + G+ +LA+GSPFG F NSV+ G
Sbjct: 179 LGSDSRTDIAVLKIDA--KNLPSAPLGNPDALQVGEWVLAIGSPFG------FENSVTAG 230
Query: 267 SVANCYP--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
V+ P + + D+ PG GGP+F VGI + Q G + +
Sbjct: 231 VVSAKRRSLPEDSFVPFIQTDVAVNPGNSGGPLFNSKGEVVGINAQIFSQTGGYQGLSFA 290
Query: 324 IPWE 327
IP +
Sbjct: 291 IPID 294
>gi|255087274|ref|XP_002505560.1| hypothetical protein MICPUN_63720 [Micromonas sp. RCC299]
gi|226520830|gb|ACO66818.1| hypothetical protein MICPUN_63720 [Micromonas sp. RCC299]
Length = 708
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 24/98 (24%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRS------------------ 280
+ G ++A GSPF LSP HF +V G VA + R R
Sbjct: 226 REGAPIVACGSPFAALSPTHFACAVFGGHVARAWGRRVGRRQREGGDEDGPGESSPGESP 285
Query: 281 -----LLMADIRCLPGMEGGPVF-GEHAHFVGILIRPL 312
LL+AD+ LPG EG PV + +G+L PL
Sbjct: 286 GNDPPLLLADVVALPGTEGAPVLDADGGGVIGVLTPPL 323
>gi|358638431|dbj|BAL25728.1| serine protease [Azoarcus sp. KH32C]
Length = 486
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 110/262 (41%), Gaps = 42/262 (16%)
Query: 217 VAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+A+L + ++ DLP + L P + + GD +LA+GSPFG F NSV+ G V+
Sbjct: 165 IAVLRIDAH--DLPTVPLGDPASAQVGDWVLAIGSPFG------FENSVTAGIVS----- 211
Query: 275 RSTTRSL--------LMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIP 325
+ +RSL + D+ PG GGP+ + VGI + Q G + + IP
Sbjct: 212 -AKSRSLPDEGYVPFIQTDVAINPGNSGGPLLNLNGEVVGINSQIYSQSGGYQGLSFAIP 270
Query: 326 WEAIATACSDLLLKEPQNAEKEIHINKGNLN-AVGNSLLFNSHILNGACCYKYEHVDSRC 384
+ +A D LL + + + ++N A+ S +S GA E
Sbjct: 271 ID-VAAHVKDQLLAHGKVTRGRMGVAIQDVNQALAESFGLDS--ARGALISSVESGSPAA 327
Query: 385 RSPLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHL--LEPWRFGKT-----TVS 437
++ L A ++ ID AS L + + LE WR GKT TV
Sbjct: 328 KAGLE-----AGDVILKIDGQPVASSAELPPKVAAVAPGKTVKLEVWRKGKTENVTVTVG 382
Query: 438 GWRNG-VSFQPEDSASSGHTGV 458
+ V+ E SA G GV
Sbjct: 383 EQKPAKVASDDEGSADRGRLGV 404
>gi|120612604|ref|YP_972282.1| protease Do [Acidovorax citrulli AAC00-1]
gi|120591068|gb|ABM34508.1| protease Do [Acidovorax citrulli AAC00-1]
Length = 514
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + +A+L + + KDLP + L K G+ +LA+GSPFG F NSV+ G
Sbjct: 184 LGSDPKTDIAVLKIDA--KDLPVVHLGDTKKLAVGEWVLAIGSPFG------FENSVTAG 235
Query: 267 SVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
V+ P + + D+ PG GGP+F VGI + + G + +
Sbjct: 236 VVSAKGRALPDDSFVPFIQTDVAVNPGNSGGPLFNSRGEVVGINSQIYSRSGGYQGVSFA 295
Query: 324 IPWEAIATACSDLLLKEPQNAEKEIHINKGNLN 356
IP E +A + +L + + + ++ +N
Sbjct: 296 IPIE-VAERVKEQILATGKASHARLGVSVQEVN 327
>gi|326318651|ref|YP_004236323.1| protease Do [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323375487|gb|ADX47756.1| protease Do [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 517
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + +A+L + + KDLP + L K G+ +LA+GSPFG F NSV+ G
Sbjct: 187 LGSDPKTDIAVLKIDA--KDLPVVHLGDTKKLSVGEWVLAIGSPFG------FENSVTAG 238
Query: 267 SVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
V+ P + + D+ PG GGP+F VGI + + G + +
Sbjct: 239 VVSAKGRALPDDSFVPFIQTDVAVNPGNSGGPLFNSRGEVVGINSQIYSRSGGYQGVSFA 298
Query: 324 IPWE 327
IP E
Sbjct: 299 IPIE 302
>gi|333916528|ref|YP_004490260.1| protease Do [Delftia sp. Cs1-4]
gi|333746728|gb|AEF91905.1| protease Do [Delftia sp. Cs1-4]
Length = 517
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHF 259
E S L + + VA+L + + K+LP ++L T + GD +LA+GSPFG F
Sbjct: 180 REFSAKVLGADPKTDVAVLRIEA--KNLPTVSLGKTADLRVGDWVLAIGSPFG------F 231
Query: 260 FNSVSMGSVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG 317
+SV+ G V+ P + L D+ PG GGP+F VGI + + G
Sbjct: 232 ESSVTAGVVSAKGRTLPDDSFVPFLQTDVAINPGNSGGPLFNARGEVVGINSQIYSRSGG 291
Query: 318 AE-IQLVIPWE 327
+ + IP E
Sbjct: 292 YQGVSFAIPIE 302
>gi|94312552|ref|YP_585761.1| endopeptidase [Cupriavidus metallidurans CH34]
gi|93356404|gb|ABF10492.1| multifunctional enzyme (serine-type endopeptidase / oxidoreductase)
(degP / mucD-like) [Cupriavidus metallidurans CH34]
Length = 487
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + +A++ + + K+LP + L P R G+ +LA+GSP+G F N+V+ G
Sbjct: 158 LGSDPQTDIAVIRIDA--KNLPTVRLGDPSKTRVGEPVLAIGSPYG------FENTVTAG 209
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F + +GI + Q G + +
Sbjct: 210 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFA 269
Query: 324 IPWEAIATACSDLLL 338
IP +AT + L+
Sbjct: 270 IPIN-VATKVEEQLV 283
>gi|160897041|ref|YP_001562623.1| protease Do [Delftia acidovorans SPH-1]
gi|160362625|gb|ABX34238.1| protease Do [Delftia acidovorans SPH-1]
Length = 520
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHF 259
E S L + + VA+L + + K+LP ++L T + GD +LA+GSPFG F
Sbjct: 183 REFSAKVLGADPKTDVAVLRIEA--KNLPTVSLGKTADLRVGDWVLAIGSPFG------F 234
Query: 260 FNSVSMGSVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG 317
+SV+ G V+ P + L D+ PG GGP+F VGI + + G
Sbjct: 235 ESSVTAGVVSAKGRTLPDDSFVPFLQTDVAINPGNSGGPLFNARGEVVGINSQIYSRSGG 294
Query: 318 AE-IQLVIPWE 327
+ + IP E
Sbjct: 295 YQGVSFAIPIE 305
>gi|299534064|ref|ZP_07047416.1| protease Do [Comamonas testosteroni S44]
gi|298717973|gb|EFI58978.1| protease Do [Comamonas testosteroni S44]
Length = 501
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-----SYLK----DLPNIAL- 234
+ S+ + L +H +E + + L + R +LG + LK LP + L
Sbjct: 137 VSSDGVILTNAHVVHGAKEVT-VKLNDRREFRAKVLGADPKTDVAVLKIDAAGLPTVKLG 195
Query: 235 -TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLLMADIRCLPG 291
T + GD +LA+GSPFG F NSV+ G V+ P + L D+ PG
Sbjct: 196 QTSQLRVGDWVLAIGSPFG------FENSVTAGVVSAKGRSLPDDSFVPFLQTDVAINPG 249
Query: 292 MEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
GGP+F VGI + + G + + IP E
Sbjct: 250 NSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIE 286
>gi|254446962|ref|ZP_05060429.1| peptidase S1 and S6, chymotrypsin/Hap [gamma proteobacterium
HTCC5015]
gi|198263101|gb|EDY87379.1| peptidase S1 and S6, chymotrypsin/Hap [gamma proteobacterium
HTCC5015]
Length = 372
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 217 VAILGVSSYLKDLPNIALTPL--NKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+A+L + + DL I L P ++ GD+ LA+G+PFGV +V+MG ++
Sbjct: 149 LAVLAIEA--SDLEPITLAPSESHRVGDVALAIGNPFGV------GQTVTMGIISATGRD 200
Query: 275 R---STTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIA 330
R +T + + D PG GG + H +GI Q G++ I IP + +
Sbjct: 201 RLGLNTFENFIQTDAAINPGNSGGALVNAHGELIGINTAIFSQDGGSQGIGFAIPADMAS 260
Query: 331 TACSDLL 337
+ + +L
Sbjct: 261 SVLAQIL 267
>gi|351728985|ref|ZP_08946676.1| protease Do [Acidovorax radicis N35]
Length = 506
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + VA+L + + KDLP + L + G+ +LA+GSPFG F NSV+ G
Sbjct: 176 LGADPKTDVAVLKIDA--KDLPTVRLGSTRDLQVGEWVLAIGSPFG------FENSVTAG 227
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 228 VVSAKGRSLPDDSLVPFIQTDVAVNPGNSGGPLFNARGEVVGI 270
>gi|422598763|ref|ZP_16673019.1| protease Do [Pseudomonas syringae pv. lachrymans str. M301315]
gi|330989036|gb|EGH87139.1| protease Do [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 479
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 144 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 195
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 196 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|422405023|ref|ZP_16482071.1| protease Do, partial [Pseudomonas syringae pv. glycinea str. race
4]
gi|330879248|gb|EGH13397.1| protease Do [Pseudomonas syringae pv. glycinea str. race 4]
Length = 381
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 46 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 97
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 98 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 138
>gi|377819923|ref|YP_004976294.1| protease Do [Burkholderia sp. YI23]
gi|357934758|gb|AET88317.1| protease Do [Burkholderia sp. YI23]
Length = 505
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + KDLP + + N K G ++A+GSP+G F N+V+ G S +
Sbjct: 176 SDVAVLKIDA--KDLPTVKIGDPNGSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 227
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 228 RALPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINE- 286
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
A D L+K H+++G L
Sbjct: 287 AIKVKDALIKTG-------HVDRGRL 305
>gi|416014896|ref|ZP_11562613.1| protease Do [Pseudomonas syringae pv. glycinea str. B076]
gi|416028883|ref|ZP_11571772.1| protease Do [Pseudomonas syringae pv. glycinea str. race 4]
gi|117380748|gb|ABK34461.1| MucD [Pseudomonas syringae pv. glycinea]
gi|298156746|gb|EFH97837.1| Serine protease precursor MucD/AlgY associated with sigma factor
RpoE [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|320325564|gb|EFW81626.1| protease Do [Pseudomonas syringae pv. glycinea str. B076]
gi|320327150|gb|EFW83164.1| protease Do [Pseudomonas syringae pv. glycinea str. race 4]
Length = 479
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 144 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 195
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 196 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|257486559|ref|ZP_05640600.1| protease Do [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422680697|ref|ZP_16738968.1| protease Do [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|331010042|gb|EGH90098.1| protease Do [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 479
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 144 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 195
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 196 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|152980821|ref|YP_001354055.1| serine protease [Janthinobacterium sp. Marseille]
gi|151280898|gb|ABR89308.1| periplasmic serine protease [Janthinobacterium sp. Marseille]
Length = 453
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + + VA+L + + + LP + + NK GD LA+GSPFG F NS + G
Sbjct: 120 SDAVADVALLKIDA--QGLPTVRIGNPNKVEVGDWALAIGSPFG------FSNSATAGII 171
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIP 325
S P + L D+ PG GGP+F ++ +GI R G + + IP
Sbjct: 172 SATRRILPGADYIPFLQTDVPVNPGNSGGPLFNQYGEVIGINSRIYSNSGGYQGLSFAIP 231
Query: 326 WEA 328
+A
Sbjct: 232 IDA 234
>gi|264680105|ref|YP_003280014.1| protease Do [Comamonas testosteroni CNB-2]
gi|262210620|gb|ACY34718.1| protease Do [Comamonas testosteroni CNB-2]
Length = 515
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-----SYLK----DLPNIAL- 234
+ S+ + L +H +E + + L + R +LG + LK LP + L
Sbjct: 151 VSSDGVILTNAHVVHGAKEVT-VKLNDRREFRAKVLGADPKTDVAVLKIDAAGLPTVKLG 209
Query: 235 -TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLLMADIRCLPG 291
T + GD +LA+GSPFG F NSV+ G V+ P + L D+ PG
Sbjct: 210 QTSQLRVGDWVLAIGSPFG------FENSVTAGVVSAKGRSLPDDSFVPFLQTDVAINPG 263
Query: 292 MEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
GGP+F VGI + + G + + IP E
Sbjct: 264 NSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIE 300
>gi|188592008|ref|YP_001796606.1| periplasmic protease [Cupriavidus taiwanensis LMG 19424]
gi|170938382|emb|CAP63369.1| PERIPLASMIC PROTEASE; contains two PDZ domain [Cupriavidus
taiwanensis LMG 19424]
Length = 511
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + VA++ + + +DLP + L P R G+ +LA+GSP+G F N+V+ G
Sbjct: 182 LGTDPQTDVAVIRIDA--RDLPTVRLGDPSQVRVGEPVLAIGSPYG------FENTVTAG 233
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F + VGI + Q G + +
Sbjct: 234 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVVGINSQIYSQTGGYQGLSFA 293
Query: 324 IPWEAIATACSDLLLKEPQNAEKEIHINKGNLN 356
IP + +AT L+ + + I+ +N
Sbjct: 294 IPID-VATKVQQQLVAHGKVTRGRLGISVQEVN 325
>gi|71733724|ref|YP_276088.1| protease Do [Pseudomonas syringae pv. phaseolicola 1448A]
gi|123635346|sp|Q48EU9.1|DEGPL_PSE14 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
AltName: Full=Protease Do; Flags: Precursor
gi|71554277|gb|AAZ33488.1| S1C (protease Do) subfamily peptidase MucD [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 479
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 144 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 195
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 196 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|260220632|emb|CBA28366.1| hypothetical protein Csp_A06910 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 492
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 24/103 (23%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + + KDLP + + P N R G+ ++A+GSPFG F N+V+ G V+
Sbjct: 169 SDVAVLKIDA--KDLPTVKIGDPKNSRVGEWVVAIGSPFG------FENTVTAGIVS--- 217
Query: 273 PPRSTTRSL--------LMADIRCLPGMEGGPVFGEHAHFVGI 307
+ +RSL L D+ PG GGP+F +GI
Sbjct: 218 ---AKSRSLPDEGYVPFLQTDVAINPGNSGGPLFNLAGEVIGI 257
>gi|116694114|ref|YP_728325.1| trypsin-like serine protease [Ralstonia eutropha H16]
gi|113528613|emb|CAJ94960.1| Trypsin-like serine protease, contains C-terminal PDZ domain
[Ralstonia eutropha H16]
Length = 488
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + VA++ + + K+LP + L P R G+ +LA+GSP+G F N+V+ G
Sbjct: 159 LGSDPQTDVAVIRIDA--KNLPAVRLGDPSQVRVGEPVLAIGSPYG------FENTVTAG 210
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F + VGI + Q G + +
Sbjct: 211 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVVGINAQIYSQTGGYQGLSFA 270
Query: 324 IPWEAIATACSDLLLKEPQNAEKEIHINKGNLN 356
IP + +AT L+ + + I+ +N
Sbjct: 271 IPID-VATKVQQQLVAHGKVTRGRLGISVQEVN 302
>gi|384084354|ref|ZP_09995529.1| protease Do [Acidithiobacillus thiooxidans ATCC 19377]
Length = 506
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 227 KDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLL 282
KDLP + + + K G LLAVG+PFG F+N+V+ G V+ N P +
Sbjct: 181 KDLPTVPIGNSDHLKVGQWLLAVGAPFG------FYNTVTQGVVSAMNRPLPDDEYIPFI 234
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGI 307
+D+ PG GGP+F +GI
Sbjct: 235 QSDVPINPGNSGGPLFNMKGQVIGI 259
>gi|71064728|ref|YP_263455.1| serine protease [Psychrobacter arcticus 273-4]
gi|71037713|gb|AAZ18021.1| possible serine protease [Psychrobacter arcticus 273-4]
Length = 485
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S S VA+L V+ K P + + N K G+ +LA+GSPFG + S + S
Sbjct: 152 SDERSDVAVLKVTG--KKFPALPIGDSNSLKVGEPVLAIGSPFG----FDYSASAGIVSA 205
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ R T+ S + D+ PG GGP+F + +GI
Sbjct: 206 KSRNFSRETSVSFIQTDVALNPGNSGGPLFNQRGEVIGI 244
>gi|289628140|ref|ZP_06461094.1| protease Do [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289649894|ref|ZP_06481237.1| protease Do [Pseudomonas syringae pv. aesculi str. 2250]
gi|422585908|ref|ZP_16660964.1| protease Do [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330871245|gb|EGH05954.1| protease Do [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 479
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 144 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 195
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 196 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMGGEVVGI 236
>gi|297539258|ref|YP_003675027.1| protease Do [Methylotenera versatilis 301]
gi|297258605|gb|ADI30450.1| protease Do [Methylotenera versatilis 301]
Length = 489
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 25/124 (20%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VAIL + + +LP + + P R G+ +LA+GSPFG F NSV+ G V+
Sbjct: 166 SDVAILKIDA--NNLPTVKIGNPQKARVGEWVLAIGSPFG------FENSVTAGIVS--- 214
Query: 273 PPRSTTRSL--------LMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
+ +RSL L D+ PG GGP+F +GI + + G+E +
Sbjct: 215 ---AKSRSLPDEGYVPFLQTDVAINPGNSGGPLFNLQGEVIGINSQIYSKSGGSEGLSFA 271
Query: 324 IPWE 327
IP +
Sbjct: 272 IPID 275
>gi|428202473|ref|YP_007081062.1| trypsin-like serine protease with C-terminal PDZ domain
[Pleurocapsa sp. PCC 7327]
gi|427979905|gb|AFY77505.1| trypsin-like serine protease with C-terminal PDZ domain
[Pleurocapsa sp. PCC 7327]
Length = 301
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 35/135 (25%)
Query: 228 DLPNIALTPLNKR--GDLLLAVGSPFG-----VLSPMHFFNSVSMGSVANC-------YP 273
DLP I + +K G+L+LAVG+PFG + +H + + G + +
Sbjct: 89 DLPTITIGDASKLRVGELVLAVGNPFGATGALTMGIVHSLDGEATGKIKQTKVYAKKSFV 148
Query: 274 PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI--------------------LIRPLR 313
P ++ ++ADIR PG GGP+ +GI L P R
Sbjct: 149 PNLQSQGWVVADIRLAPGNSGGPLANARGEVIGINTAIAGGLALVVPSYEVERFLASPHR 208
Query: 314 QKSGAEIQ-LVIPWE 327
G +Q +++PWE
Sbjct: 209 ITLGVTMQPVLVPWE 223
>gi|339321468|ref|YP_004680362.1| serine protease do-like protein [Cupriavidus necator N-1]
gi|338168076|gb|AEI79130.1| serine protease do-like protein [Cupriavidus necator N-1]
Length = 507
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + VA++ + + ++LP + L P R G+ +LA+GSP+G F N+V+ G
Sbjct: 178 LGSDPQTDVAVIRIDA--RNLPTVRLGDPSRVRVGEPVLAIGSPYG------FENTVTAG 229
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F + VGI + Q G + +
Sbjct: 230 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVVGINAQIYSQTGGYQGLSFA 289
Query: 324 IPWEAIATACSDLLLKEPQNAEKEIHINKGNLN 356
IP + +AT L+ + + I+ +N
Sbjct: 290 IPID-VATKVQQQLVAHGKVTRGRLGISVQEVN 321
>gi|421484097|ref|ZP_15931669.1| serine protease MucD 2 [Achromobacter piechaudii HLE]
gi|400197804|gb|EJO30768.1| serine protease MucD 2 [Achromobacter piechaudii HLE]
Length = 480
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + + KDLP + + +N+ G+ +LA+GSP+G N+ + G S
Sbjct: 159 VAVLKIDA--KDLPVVKVGDVNQLQVGEWVLAIGSPYG------LENTATAGIVSAKGRS 210
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIAT 331
P T+ + D+ PG GGP+F + VGI + + G + + IP + +A
Sbjct: 211 LPDDTSVPFIQTDVAVNPGNSGGPLFNDRGEVVGINSQIYSRTGGFQGLSFSIPID-VAY 269
Query: 332 ACSDLLLK--EPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKYEH 379
D +L+ + Q+A + + + N + + NS NS +GA E
Sbjct: 270 KIKDQILEHGKVQHARLGVTVQEVNQD-LANSFKLNSP--SGALVSSVEK 316
>gi|418529925|ref|ZP_13095852.1| protease Do [Comamonas testosteroni ATCC 11996]
gi|371452981|gb|EHN66006.1| protease Do [Comamonas testosteroni ATCC 11996]
Length = 532
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCY 272
VA+L + + LP + L T + GD +LA+GSPFG F NSV+ G V+
Sbjct: 210 VAVLKIDA--SGLPTVKLGQTSQLRVGDWVLAIGSPFG------FENSVTAGVVSAKGRS 261
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
P + L D+ PG GGP+F VGI + + G + + IP E
Sbjct: 262 LPDDSFVPFLQTDVAINPGNSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIE 317
>gi|409417804|ref|ZP_11257828.1| protease Do [Pseudomonas sp. HYS]
Length = 476
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V KDLP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 147 VALLKVEG--KDLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 198
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 199 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 233
>gi|422605846|ref|ZP_16677858.1| protease Do, partial [Pseudomonas syringae pv. mori str. 301020]
gi|330889500|gb|EGH22161.1| protease Do [Pseudomonas syringae pv. mori str. 301020]
Length = 391
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 56 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 107
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 108 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGGVVGI 148
>gi|153874555|ref|ZP_02002730.1| Periplasmic serine protease [Beggiatoa sp. PS]
gi|152068980|gb|EDN67269.1| Periplasmic serine protease [Beggiatoa sp. PS]
Length = 431
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 13/127 (10%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S +A+L V + DLP + L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 99 SDIALLKVDA--TDLPIVQLGSSNDLKVGEWVLAIGSPFG------FEHSVTAGIVSAKG 150
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAI 329
PR + D+ PG GGP+F +G+ + + G + IP + +
Sbjct: 151 RSLPRENYVPFIQTDVAINPGNSGGPLFNLKGQVIGVNSQIYSRTGGFMGLSFAIPVDVM 210
Query: 330 ATACSDL 336
T L
Sbjct: 211 KTVVEQL 217
>gi|221065231|ref|ZP_03541336.1| protease Do [Comamonas testosteroni KF-1]
gi|220710254|gb|EED65622.1| protease Do [Comamonas testosteroni KF-1]
Length = 530
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCY 272
VA+L + + LP + L T + GD +LA+GSPFG F NSV+ G V+
Sbjct: 208 VAVLKIDA--SGLPTVKLGQTSQLRVGDWVLAIGSPFG------FENSVTAGVVSAKGRS 259
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
P + L D+ PG GGP+F VGI + + G + + IP E
Sbjct: 260 LPDDSFVPFLQTDVAINPGNSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIE 315
>gi|398804284|ref|ZP_10563280.1| periplasmic serine protease, Do/DeqQ family [Polaromonas sp. CF318]
gi|398094228|gb|EJL84597.1| periplasmic serine protease, Do/DeqQ family [Polaromonas sp. CF318]
Length = 506
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCY 272
VA+L + + ++LP + L ++ K G+ +LA+GSPFG F N+V+ G V+
Sbjct: 184 VAVLRIEA--RNLPVVTLGKVSDLKVGEWVLAIGSPFG------FENTVTAGVVSAKGRS 235
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIAT 331
P + + D+ PG GGP+F VGI + + G + + IP + A
Sbjct: 236 LPDDSAVPFIQTDVAVNPGNSGGPLFNTRGEVVGINSQIYTRSGGYQGVSFAIPIDVAAR 295
Query: 332 ACSDLL 337
+ L+
Sbjct: 296 IKNQLV 301
>gi|323701261|ref|ZP_08112936.1| HtrA2 peptidase [Desulfotomaculum nigrificans DSM 574]
gi|333924536|ref|YP_004498116.1| HtrA2 peptidase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533863|gb|EGB23727.1| HtrA2 peptidase [Desulfotomaculum nigrificans DSM 574]
gi|333750097|gb|AEF95204.1| HtrA2 peptidase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 380
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 26/155 (16%)
Query: 201 MEESSNLSLM---SKSTSRVAILGVSSYL---------KDLPNIALTPLNK--RGDLLLA 246
+E + N+++ K T R ++G S L KD P + L N+ G+ ++A
Sbjct: 127 IEGAENITVTVKGDKKTYRAKLIGADSSLDLAVLKIDGKDFPTLPLGDSNRIRVGNWVIA 186
Query: 247 VGSPFGVLSPMHFFNSVSMGSVANCYPP----RSTTRSLLMADIRCLPGMEGGPVFGEHA 302
+GSPFG+ ++V++G ++ P T +LL D PG GGP+ +
Sbjct: 187 IGSPFGLE------DTVTIGVISAKGRPLEIDNRTFENLLQTDASINPGNSGGPLLNLNG 240
Query: 303 HFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLL 337
VGI Q G I IP + +L+
Sbjct: 241 EVVGINTAINAQAQG--IGFAIPTSTVKEVLDELI 273
>gi|340788496|ref|YP_004753961.1| putative periplasmic serine protease [Collimonas fungivorans
Ter331]
gi|340553763|gb|AEK63138.1| putative periplasmic serine protease [Collimonas fungivorans
Ter331]
Length = 507
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 209 LMSKSTSRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S S +A++ + + K+LP I L + G+ +LA+GSP+G F N+ + G
Sbjct: 178 LGSDKQSDIAVIRIDA--KNLPIVQIGNPALTRVGEPVLAIGSPYG------FENTATAG 229
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S + P T + D+ PG GGP+F +GI + Q G + +
Sbjct: 230 IVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNIKGEVIGINSQIYSQTGGYQGLSFA 289
Query: 324 IPWEAIATACSDLLLK 339
IP + +AT L+K
Sbjct: 290 IPID-VATKVEQQLVK 304
>gi|407940589|ref|YP_006856230.1| protease Do [Acidovorax sp. KKS102]
gi|407898383|gb|AFU47592.1| protease Do [Acidovorax sp. KKS102]
Length = 507
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + VA+L + + K+LP + L + G+ +LA+GSPFG F NSV+ G
Sbjct: 177 LGSDPKTDVAVLKIDA--KNLPTVRLGSTRDLQVGEWVLAIGSPFG------FENSVTAG 228
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 229 VVSAKGRSLPDDSLVPFIQTDVAVNPGNSGGPLFNARGEVVGI 271
>gi|443642584|ref|ZP_21126434.1| Alginate biosynthesis negative regulator, serine protease AlgY/MucD
[Pseudomonas syringae pv. syringae B64]
gi|443282601|gb|ELS41606.1| Alginate biosynthesis negative regulator, serine protease AlgY/MucD
[Pseudomonas syringae pv. syringae B64]
Length = 481
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 152 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 203
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 204 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 238
>gi|66047182|ref|YP_237023.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
syringae B728a]
gi|422618132|ref|ZP_16686831.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
japonica str. M301072]
gi|422637665|ref|ZP_16701097.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae Cit
7]
gi|440722750|ref|ZP_20903125.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
BRIP34876]
gi|440725678|ref|ZP_20905942.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
BRIP34881]
gi|440742171|ref|ZP_20921500.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
BRIP39023]
gi|12661187|gb|AAK01318.1| MucD [Pseudomonas syringae pv. syringae FF5]
gi|63257889|gb|AAY38985.1| Peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
syringae B728a]
gi|330898511|gb|EGH29930.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
japonica str. M301072]
gi|330950061|gb|EGH50321.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae Cit
7]
gi|440360806|gb|ELP98062.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
BRIP34876]
gi|440368473|gb|ELQ05509.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
BRIP34881]
gi|440377994|gb|ELQ14628.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
BRIP39023]
Length = 481
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 152 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 203
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 204 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 238
>gi|352100966|ref|ZP_08958477.1| protease Do [Halomonas sp. HAL1]
gi|350600887|gb|EHA16944.1| protease Do [Halomonas sp. HAL1]
Length = 470
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + VA+L + + DLP + L + K G+ + A+GSPFG F +SV+ G V
Sbjct: 139 SDPQTDVALLKIEA--NDLPTLTLGDSDELKVGEWVAAIGSPFG------FDHSVTAGIV 190
Query: 269 A--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ N PR + D+ PG GGP+F VGI
Sbjct: 191 SAINRTLPRDAYVPFIQTDVAINPGNSGGPLFNLEGEVVGI 231
>gi|422590361|ref|ZP_16665017.1| serine protease, MucD [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877439|gb|EGH11588.1| serine protease, MucD [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 479
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 150 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 201
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|422669090|ref|ZP_16728940.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|424069078|ref|ZP_17806526.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424073518|ref|ZP_17810934.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|330981449|gb|EGH79552.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|407995633|gb|EKG36154.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|407995926|gb|EKG36429.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 481
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 152 VAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 203
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 204 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 238
>gi|296134955|ref|YP_003642197.1| protease Do [Thiomonas intermedia K12]
gi|295795077|gb|ADG29867.1| protease Do [Thiomonas intermedia K12]
Length = 497
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYL---------KDLPNIAL- 234
I S+ + L +H S ++L T + +LG + +LP + L
Sbjct: 132 ISSDGLILTNAHV-VKGASSVRVTLTDHRTYKAKVLGYDTKTDIAVIKIPATNLPTVRLG 190
Query: 235 TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
P N + GD +LA+GSP+G F+N+V+ G S + P + + D+ PG
Sbjct: 191 NPSNLEPGDWVLAIGSPYG------FYNTVTAGIVSAKSRSLPDDSMVPFIQTDVAVNPG 244
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F VGI
Sbjct: 245 NSGGPLFNTKGEVVGI 260
>gi|422299814|ref|ZP_16387364.1| serine protease, MucD [Pseudomonas avellanae BPIC 631]
gi|407988165|gb|EKG30779.1| serine protease, MucD [Pseudomonas avellanae BPIC 631]
Length = 479
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 150 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 201
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|422675309|ref|ZP_16734654.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
aceris str. M302273]
gi|330973028|gb|EGH73094.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
aceris str. M302273]
Length = 481
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 152 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 203
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 204 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 238
>gi|422644259|ref|ZP_16707397.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957811|gb|EGH58071.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 477
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 234
>gi|422628899|ref|ZP_16694106.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
pisi str. 1704B]
gi|330937659|gb|EGH41563.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 481
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 152 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 203
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 204 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 238
>gi|91789523|ref|YP_550475.1| peptidase S1C, Do [Polaromonas sp. JS666]
gi|91698748|gb|ABE45577.1| Peptidase S1C, Do [Polaromonas sp. JS666]
Length = 503
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCY 272
VA+L +++ +LP + L T K G+ +LA+GSPFG F N+V+ G V+
Sbjct: 181 VAVLRIAA--SNLPVVTLGKTSELKVGEWVLAIGSPFG------FENTVTAGVVSAKGRS 232
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P +T + D+ PG GGP+F VGI
Sbjct: 233 LPDDSTVPFIQTDVAINPGNSGGPLFNARGEVVGI 267
>gi|302186913|ref|ZP_07263586.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
syringae 642]
Length = 481
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 152 VAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 203
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 204 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 238
>gi|410090608|ref|ZP_11287200.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas viridiflava
UASWS0038]
gi|409762115|gb|EKN47144.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas viridiflava
UASWS0038]
Length = 477
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VAVLKIEG--KDLPTAKLGNSNKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 234
>gi|28871363|ref|NP_793982.1| serine protease, MucD [Pseudomonas syringae pv. tomato str. DC3000]
gi|422657039|ref|ZP_16719482.1| serine protease, MucD [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28854614|gb|AAO57677.1| serine protease, MucD [Pseudomonas syringae pv. tomato str. DC3000]
gi|331015597|gb|EGH95653.1| serine protease, MucD [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 479
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 150 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 201
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|330502441|ref|YP_004379310.1| protease Do [Pseudomonas mendocina NK-01]
gi|328916727|gb|AEB57558.1| protease Do [Pseudomonas mendocina NK-01]
Length = 474
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V KDLP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 142 SDVALLKVEG--KDLPVVRLGKADDLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 193
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAI 329
P + + D+ PG GGP+F VGI + + G + IP E +
Sbjct: 194 RNLPSDSYVPFIQTDVAINPGNSGGPLFNLQGEVVGINSQIFTRSGGFMGLSFAIPME-V 252
Query: 330 ATACSDLL 337
A +D L
Sbjct: 253 AMQVADQL 260
>gi|319764285|ref|YP_004128222.1| protease Do [Alicycliphilus denitrificans BC]
gi|317118846|gb|ADV01335.1| protease Do [Alicycliphilus denitrificans BC]
Length = 502
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-----SYLK----DLPNIALT 235
I+ N I L +H + + + L + R +LG + LK +LP + L
Sbjct: 136 IDPNGIVLTNAHVVKGATDVT-VKLTDRREFRAKVLGADPKTDVAVLKIDASNLPTVQLG 194
Query: 236 PLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLLMADIRCLPG 291
+ K GD +LA+GSPFG F NSV++G V+ P + + D PG
Sbjct: 195 SSDDLKVGDWVLAIGSPFG------FENSVTVGVVSAKGRSLPDDSYVPFIQTDAAVNPG 248
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F VGI
Sbjct: 249 NSGGPLFNARGEVVGI 264
>gi|410692513|ref|YP_003623134.1| Peptidase S1 [Thiomonas sp. 3As]
gi|294338937|emb|CAZ87281.1| Peptidase S1 [Thiomonas sp. 3As]
Length = 498
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 21/155 (13%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYL---------KDLPNIAL- 234
I S+ + L +H S ++L T + +LG + +LP + L
Sbjct: 133 ISSDGLILTNAHV-VKGASSVRVTLTDHRTYKAKVLGYDTKTDIAVIKIPATNLPTVRLG 191
Query: 235 TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
P N + GD +LA+GSP+G F+N+V+ G S + P + + D+ PG
Sbjct: 192 NPSNLEPGDWVLAIGSPYG------FYNTVTAGIVSAKSRSLPDDSMVPFIQTDVAVNPG 245
Query: 292 MEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIP 325
GGP+F VGI + Q E + IP
Sbjct: 246 NSGGPLFNTKGEVVGINSQIFTQTGAFEGLSFAIP 280
>gi|213971123|ref|ZP_03399242.1| serine protease, MucD [Pseudomonas syringae pv. tomato T1]
gi|301381860|ref|ZP_07230278.1| serine protease, MucD [Pseudomonas syringae pv. tomato Max13]
gi|302059029|ref|ZP_07250570.1| serine protease, MucD [Pseudomonas syringae pv. tomato K40]
gi|302132828|ref|ZP_07258818.1| serine protease, MucD [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213924112|gb|EEB57688.1| serine protease, MucD [Pseudomonas syringae pv. tomato T1]
Length = 479
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 150 VAVLKIEG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 201
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|381153594|ref|ZP_09865463.1| periplasmic serine protease, Do/DeqQ family [Methylomicrobium album
BG8]
gi|380885566|gb|EIC31443.1| periplasmic serine protease, Do/DeqQ family [Methylomicrobium album
BG8]
Length = 468
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + + VA+L V + KDLP + + K G+ +LA+GSPFG F SV+ G
Sbjct: 132 SDARTDVALLKVEA--KDLPTVTIGSPEKLQVGEWVLAIGSPFG------FEQSVTAGIV 183
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F + VGI + + G + IP
Sbjct: 184 SAKGRSLPGGNYVPFIQTDVAINPGNSGGPLFNMNGEVVGINSQIYSRTGGFMGLSFAIP 243
Query: 326 WEAIATACSDLLLK 339
+ ++ + K
Sbjct: 244 MDVVSNVVDQIKTK 257
>gi|330826432|ref|YP_004389735.1| protease Do [Alicycliphilus denitrificans K601]
gi|329311804|gb|AEB86219.1| protease Do [Alicycliphilus denitrificans K601]
Length = 506
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-----SYLK----DLPNIALT 235
I+ N I L +H + + + L + R +LG + LK +LP + L
Sbjct: 140 IDPNGIVLTNAHVVKGATDVT-VKLTDRREFRAKVLGADPKTDVAVLKIDASNLPTVQLG 198
Query: 236 PLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLLMADIRCLPG 291
+ K GD +LA+GSPFG F NSV++G V+ P + + D PG
Sbjct: 199 SSDDLKVGDWVLAIGSPFG------FENSVTVGVVSAKGRSLPDDSYVPFIQTDAAVNPG 252
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F VGI
Sbjct: 253 NSGGPLFNARGEVVGI 268
>gi|255020751|ref|ZP_05292810.1| protease Do [Acidithiobacillus caldus ATCC 51756]
gi|254969813|gb|EET27316.1| protease Do [Acidithiobacillus caldus ATCC 51756]
Length = 501
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 227 KDLPNIALTPLNKRGDL-----LLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTR 279
+DLP PL DL LLAVG+PFG FFN+V+ G S N P
Sbjct: 176 QDLPT---APLGNSDDLKVGQWLLAVGAPFG------FFNTVTQGVVSATNRPLPDDEYI 226
Query: 280 SLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQL--VIPWEAIATACSDLL 337
+ +D+ PG GGP+F +GI + + SG + L IP + DL
Sbjct: 227 PFIQSDVPINPGNSGGPLFNMAGQVIGINDQ-IYTNSGGYMGLSFSIPINTVMQVVRDLK 285
Query: 338 LKEP 341
+P
Sbjct: 286 EHKP 289
>gi|340781318|ref|YP_004747925.1| protease Do [Acidithiobacillus caldus SM-1]
gi|340555471|gb|AEK57225.1| protease Do [Acidithiobacillus caldus SM-1]
Length = 501
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 227 KDLPNIALTPLNKRGDL-----LLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTR 279
+DLP PL DL LLAVG+PFG FFN+V+ G S N P
Sbjct: 176 QDLPT---APLGNSDDLKVGQWLLAVGAPFG------FFNTVTQGVVSATNRPLPDDEYI 226
Query: 280 SLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQL--VIPWEAIATACSDLL 337
+ +D+ PG GGP+F +GI + + SG + L IP + DL
Sbjct: 227 PFIQSDVPINPGNSGGPLFNMAGQVIGINDQ-IYTNSGGYMGLSFSIPINTVMQVVRDLK 285
Query: 338 LKEP 341
+P
Sbjct: 286 EHKP 289
>gi|374702560|ref|ZP_09709430.1| protease Do [Pseudomonas sp. S9]
Length = 459
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V + KDLP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 128 SDVALLKVDA--KDLPTVKLGKSEDLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 179
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 180 RSLPNESYVPFIQTDVAINPGNSGGPLFNLEGEVVGI 216
>gi|422651446|ref|ZP_16714241.1| serine protease, MucD [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964524|gb|EGH64784.1| serine protease, MucD [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 479
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G S
Sbjct: 150 VAVLKIEG--KDLPTARLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRS 201
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
>gi|332666144|ref|YP_004448932.1| peptidase S1 and S6 chymotrypsin/Hap [Haliscomenobacter hydrossis
DSM 1100]
gi|332334958|gb|AEE52059.1| peptidase S1 and S6 chymotrypsin/Hap [Haliscomenobacter hydrossis
DSM 1100]
Length = 358
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMA--DIRCLPGMEGGP 296
++GD+++AVG PFG F S S G V+N R +L D PG GGP
Sbjct: 91 RQGDVVVAVGHPFG------FKYSASQGIVSNT---RHEIEQILYIQHDAALNPGNSGGP 141
Query: 297 VFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL 336
+ E+ VG + + K G I + +P + +A A ++
Sbjct: 142 LINENGEVVG--VNTFKVKDGNSIGISLPVQHLAEALAEF 179
>gi|149200608|ref|ZP_01877613.1| heat shock serine protease, periplasmic [Lentisphaera araneosa
HTCC2155]
gi|149136310|gb|EDM24758.1| heat shock serine protease, periplasmic [Lentisphaera araneosa
HTCC2155]
Length = 274
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
Query: 207 LSLMSKSTSR-VAILGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSV 263
L ++++ S+ +A+L + + KD P + + +NK G+L++A+G+P+G F +SV
Sbjct: 138 LEILAEEPSKDLALLKIKNLNKDFPYLEMCSINKNLEGELVIAIGNPYG------FGHSV 191
Query: 264 SMGSVANCYPPRSTTRS-------LLMADIRCLPGMEGGPVFGEHAHFVGI 307
+MG V+ + S+ ++ L D PG GGP+ +VG+
Sbjct: 192 TMGIVSQQHRDLSSFQNENTKGVGYLQTDAAINPGSSGGPLVSVRRGWVGV 242
>gi|388566238|ref|ZP_10152702.1| protease Do [Hydrogenophaga sp. PBC]
gi|388266549|gb|EIK92075.1| protease Do [Hydrogenophaga sp. PBC]
Length = 496
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCY 272
VA+L + + KDLP + L + GD +LA+GSP+G F N+ ++G V+
Sbjct: 173 VAVLKIEA--KDLPTVPLGSEKDLRVGDWVLAIGSPYG------FENTATVGVVSAKGRS 224
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIAT 331
P + + D PG GGP+F VGI + G + + IP + +A
Sbjct: 225 LPDESYVPFIQTDAAINPGNSGGPLFNAKGQVVGINSQIFSHTGGYQGLAFSIPID-VAL 283
Query: 332 ACSDLLLKEPQNAEKEIHINKGNLN 356
D ++K Q + + ++N
Sbjct: 284 KVKDQIVKTGQAQHARLGVAAQDVN 308
>gi|344940062|ref|ZP_08779350.1| protease Do [Methylobacter tundripaludum SV96]
gi|344261254|gb|EGW21525.1| protease Do [Methylobacter tundripaludum SV96]
Length = 467
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ + + VA+L V + KDLP + + NK G+ +LA+GSPFG F SV+ G
Sbjct: 132 TDARTDVALLKVDA--KDLPAVTIGNPNKLQVGEWVLAIGSPFG------FEQSVTAGII 183
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 184 SAKGRSLPGGNYVPFIQTDVAINPGNSGGPLFNMEGKVVGI 224
>gi|300694600|ref|YP_003750573.1| periplasmic protease; contains two pdz domain [Ralstonia
solanacearum PSI07]
gi|299076637|emb|CBJ35975.1| periplasmic protease; contains two PDZ domain [Ralstonia
solanacearum PSI07]
Length = 490
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +++ ++LP + + P K G+ +LA+GSP+G F N+V+ G S +
Sbjct: 167 SDVAVLRIAA--RNLPTVQIGNPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKS 218
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + +GI
Sbjct: 219 RSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGI 255
>gi|344176010|emb|CCA87166.1| periplasmic protease; contains two PDZ domain [Ralstonia syzygii
R24]
Length = 490
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +++ ++LP + + P K G+ +LA+GSP+G F N+V+ G S +
Sbjct: 167 SDVAVLRIAA--RNLPTVQIGNPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKS 218
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + +GI
Sbjct: 219 RSLPDDTYVPFIQTDVAVNPGNSGGPLFSQRGEVIGI 255
>gi|198284551|ref|YP_002220872.1| protease Do [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667816|ref|YP_002427219.1| serine protease, DO/DeqQ family [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|198249072|gb|ACH84665.1| protease Do [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218520029|gb|ACK80615.1| serine protease, DO/DeqQ family [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 506
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 227 KDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLL 282
K+LP + + + K G LLAVG+PFG F+N+V+ G V+ N P +
Sbjct: 181 KNLPTVPIGNSDDLKVGQWLLAVGAPFG------FYNTVTQGVVSAMNRPLPDDEYIPFI 234
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGI 307
+D+ PG GGP+F + +GI
Sbjct: 235 QSDVPINPGNSGGPLFNMNGQVIGI 259
>gi|395005530|ref|ZP_10389405.1| periplasmic serine protease, Do/DeqQ family [Acidovorax sp. CF316]
gi|394316457|gb|EJE53181.1| periplasmic serine protease, Do/DeqQ family [Acidovorax sp. CF316]
Length = 510
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + VA+L + + K+LP + L + G+ +LA+GSPFG F NSV+ G
Sbjct: 180 LGADPKTDVAVLKIDA--KNLPTVRLGSTRDLQVGEWVLAIGSPFG------FENSVTAG 231
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
S P + + D+ PG GGP+F VGI + + G + +
Sbjct: 232 VVSAKGRSLPDDSLVPFIQTDVAVNPGNSGGPLFNGRGEVVGINSQIYSRSGGYQGVSFA 291
Query: 324 IPWE 327
IP E
Sbjct: 292 IPIE 295
>gi|357403944|ref|YP_004915868.1| peptidase S1 [Methylomicrobium alcaliphilum 20Z]
gi|351716609|emb|CCE22271.1| Peptidase S1 [Methylomicrobium alcaliphilum 20Z]
Length = 465
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 13/134 (9%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S + VA+L + + +DLP++A+ K G+ +LA+GSPFG F SV+ G
Sbjct: 131 SDSRTDVALLKIDA--EDLPSVAIGSPEKLQVGEWVLAIGSPFG------FEQSVTAGIV 182
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F VGI + + G + IP
Sbjct: 183 SAKGRSLPGGNYIPFIQTDVAINPGNSGGPLFNMEGKVVGINSQIYSRTGGFMGLSFAIP 242
Query: 326 WEAIATACSDLLLK 339
+ + L K
Sbjct: 243 MDVVMNVVDQLKTK 256
>gi|421747866|ref|ZP_16185530.1| periplasmic protease [Cupriavidus necator HPC(L)]
gi|409773458|gb|EKN55252.1| periplasmic protease [Cupriavidus necator HPC(L)]
Length = 491
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 227 KDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLL 282
KDLP + L P R G+ ++A+GSP+G F N+V+ G S + P T +
Sbjct: 178 KDLPTVQLGDPSQVRVGEPVVAIGSPYG------FENTVTAGIVSAKSRALPDDTYVPFI 231
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGI 307
D+ PG GGP+F + +GI
Sbjct: 232 QTDVAVNPGNSGGPLFNQRGEVIGI 256
>gi|359397185|ref|ZP_09190235.1| putative periplasmic serine protease -like protein [Halomonas
boliviensis LC1]
gi|357968979|gb|EHJ91428.1| putative periplasmic serine protease -like protein [Halomonas
boliviensis LC1]
Length = 473
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + VA+L + + DLP + L + K G+ + A+GSPFG F +SV+ G V
Sbjct: 142 SDPQTDVALLKIDA--SDLPTLTLGDSDELKVGEWVAAIGSPFG------FDHSVTAGIV 193
Query: 269 A--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ N PR + D+ PG GGP+F VGI
Sbjct: 194 SAINRTLPRDAYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 234
>gi|390957288|ref|YP_006421045.1| trypsin-like serine protease with C-terminal PDZ domain
[Terriglobus roseus DSM 18391]
gi|390412206|gb|AFL87710.1| trypsin-like serine protease with C-terminal PDZ domain
[Terriglobus roseus DSM 18391]
Length = 521
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
+ +A++ V ++ DLP I+ +K G +LA GSPFGVL F + + S N
Sbjct: 180 TDIAVVKVDAH--DLPAISWGDSSKLQPGQTVLAFGSPFGVL---QFSVTRGIVSAVNRA 234
Query: 273 PPRS----TTRSLLMADIRCLPGMEGGPVFGEHAHFVGI-LIRPLRQKSGAEIQLVIPWE 327
P S T L+ D PG GGP+ H VGI + S A IP
Sbjct: 235 APFSSDARTPGGLIQTDAAVNPGNSGGPLVNAHGELVGINQMIATNSGSFAGASFAIP-A 293
Query: 328 AIATACSDLLLK 339
A A A +D ++K
Sbjct: 294 ATAKAIADQIIK 305
>gi|390569368|ref|ZP_10249655.1| protease Do [Burkholderia terrae BS001]
gi|420252948|ref|ZP_14756015.1| periplasmic serine protease, Do/DeqQ family [Burkholderia sp. BT03]
gi|389938679|gb|EIN00521.1| protease Do [Burkholderia terrae BS001]
gi|398052907|gb|EJL45141.1| periplasmic serine protease, Do/DeqQ family [Burkholderia sp. BT03]
Length = 504
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + KDLP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 179 SDVAVLKIDA--KDLPTVKIGDPRSSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 230
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 231 RSLPDENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEA 290
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
DL+ K H+++G L
Sbjct: 291 MKVKDDLV--------KTGHVSRGRL 308
>gi|186475239|ref|YP_001856709.1| protease Do [Burkholderia phymatum STM815]
gi|184191698|gb|ACC69663.1| protease Do [Burkholderia phymatum STM815]
Length = 500
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + KDLP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 175 SDVAVLKIDA--KDLPTVKIGDPRQSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 226
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 227 RSLPDENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEA 286
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
DL+ K H+++G L
Sbjct: 287 IKVKDDLV--------KTGHVSRGRL 304
>gi|445498682|ref|ZP_21465537.1| serine endopeptidase DegP [Janthinobacterium sp. HH01]
gi|444788677|gb|ELX10225.1| serine endopeptidase DegP [Janthinobacterium sp. HH01]
Length = 499
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S S VA+L + + K+LP + L N K G+ +LA+GSP+G N+V+ G
Sbjct: 168 LGSDPKSDVAVLKIDA--KNLPVVPLAKGNDLKVGEWVLAIGSPYG------LDNTVTAG 219
Query: 267 SVANCYPPRSTTRSL-------LMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE 319
V+ + RSL + D+ PG GGP+F VGI + Q G +
Sbjct: 220 VVS------AKGRSLPDGNVPFIQTDVAVNPGNSGGPLFNTRGEVVGINSQIYSQTGGYQ 273
Query: 320 -IQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHILNGACCYKYE 378
+ IP + +A D ++ + ++ + +N G + FN GA E
Sbjct: 274 GLSFAIPID-VAGKIKDQIVSTGKVTHAKLGVTVQEINQ-GFADSFNLATPEGALVSNIE 331
Query: 379 H 379
Sbjct: 332 K 332
>gi|344300032|gb|EGW30372.1| hypothetical protein SPAPADRAFT_157314 [Spathaspora passalidarum
NRRL Y-27907]
Length = 493
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 47/195 (24%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGE 300
GD + V SPF + + F VS+G++ + D++ L M GG V +
Sbjct: 137 GDHVKIVSSPFNFTNSLIFNQFVSVGNI------NYKLDKFFLTDVKYLENMNGGVVATK 190
Query: 301 HAHFVGILIRPLRQKSG-AEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKGNLNAVG 359
+G++ LR+ +G ++ ++IPW+ + T L PQ+ +
Sbjct: 191 SNQSLGLIFGNLRKLNGDGDLTVIIPWKYVFTLIKH-FLPPPQSVRRA-----------A 238
Query: 360 NSLLFNSHILNGACCYKYEHVDSRCRSPLP-IQKALASVC--LITIDDGV--WASGVLLN 414
N L +P P + A+ SV +I GV WA+ + N
Sbjct: 239 NPKL----------------------NPKPKLSSAITSVIPLIIISSKGVSSWATCIYYN 276
Query: 415 DQGLILTNAHLLEPW 429
Q L+ TN H++EP+
Sbjct: 277 YQTLV-TNRHVIEPF 290
>gi|255020044|ref|ZP_05292117.1| serine protease MucD [Acidithiobacillus caldus ATCC 51756]
gi|340783433|ref|YP_004750040.1| serine protease MucD [Acidithiobacillus caldus SM-1]
gi|254970573|gb|EET28062.1| serine protease MucD [Acidithiobacillus caldus ATCC 51756]
gi|340557584|gb|AEK59338.1| serine protease MucD [Acidithiobacillus caldus SM-1]
Length = 496
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 228 DLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA---NCYPPRSTTRSLL 282
+LP + L N K G LLA+G PFG F+N+V+ G V+ P +
Sbjct: 178 NLPTVQLGNSNDLKVGQWLLAIGMPFG------FYNTVTQGVVSALDRSLPHDDEYIPFI 231
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGI 307
+D+ PG GGP+F VGI
Sbjct: 232 QSDVPINPGNSGGPIFNMEGQVVGI 256
>gi|429332989|ref|ZP_19213697.1| protease Do [Pseudomonas putida CSV86]
gi|428762335|gb|EKX84541.1| protease Do [Pseudomonas putida CSV86]
Length = 476
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L +K G+ +LA+GSPFG F +SV+ G S
Sbjct: 147 VALLKVDG--KNLPTVKLGDSSKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 198
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 199 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 233
>gi|422322168|ref|ZP_16403210.1| protease Do [Achromobacter xylosoxidans C54]
gi|317402960|gb|EFV83500.1| protease Do [Achromobacter xylosoxidans C54]
Length = 454
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + + VA++ + + ++LP + + +NK G+ +LA+GSP+G N+ + G
Sbjct: 125 LGADTQTDVAVIKIDA--RNLPVVKIGDVNKLQVGEWVLAIGSPYG------LENTATAG 176
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T+ + D+ PG GGP+F + VGI
Sbjct: 177 IVSAKGRSLPDDTSVPFIQTDVAVNPGNSGGPLFNDRGEVVGI 219
>gi|94501775|ref|ZP_01308288.1| Peptidase S1 and S6, chymotrypsin/Hap [Bermanella marisrubri]
gi|94426083|gb|EAT11078.1| Peptidase S1 and S6, chymotrypsin/Hap [Oceanobacter sp. RED65]
Length = 348
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALT---PLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGS 267
S + + VA+L + L+DLP I LN GD+ LA+G+PFGV +V+MG
Sbjct: 120 SDAATDVAVLKID--LEDLPVIPFAQDASLNV-GDVTLAIGNPFGV------GQTVTMGI 170
Query: 268 VANCYPPR---STTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLV 323
V+ + ST + D PG GG + VGI Q G + I
Sbjct: 171 VSATGRNQLGISTYEDFIQTDAAVNPGNSGGALVNAMGELVGINTAIYSQSGGYQGISFA 230
Query: 324 IPWEAIATACSDLL 337
IP + DLL
Sbjct: 231 IPLKNAMKVAVDLL 244
>gi|311104979|ref|YP_003977832.1| serine protease MucD 2 [Achromobacter xylosoxidans A8]
gi|310759668|gb|ADP15117.1| serine protease MucD 2 [Achromobacter xylosoxidans A8]
Length = 480
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S + VA+L + + K+LP + + +N+ G+ +LA+GSP+G N+ + G
Sbjct: 151 LGSDPQTDVAVLKIDA--KNLPVVKVGDVNQLQVGEWVLAIGSPYG------LENTATAG 202
Query: 267 --SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T+ + D+ PG GGP+F + VGI
Sbjct: 203 IVSAKGRSLPDDTSVPFIQTDVAVNPGNSGGPLFNDRGEVVGI 245
>gi|431804160|ref|YP_007231063.1| protease Do [Pseudomonas putida HB3267]
gi|430794925|gb|AGA75120.1| protease Do [Pseudomonas putida HB3267]
Length = 477
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVEG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 234
>gi|319793241|ref|YP_004154881.1| protease do [Variovorax paradoxus EPS]
gi|315595704|gb|ADU36770.1| protease Do [Variovorax paradoxus EPS]
Length = 493
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + + +A+L + + K+LP +AL T K G+ +LA+GSPFG F N+V+ G
Sbjct: 162 LGADAKTDIAVLKIDA--KNLPVLALGNTKDLKVGEWVLAIGSPFG------FENTVTAG 213
Query: 267 SVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
V+ P + + D+ PG GGP+ VGI
Sbjct: 214 VVSAKGRSLPDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGI 256
>gi|339489110|ref|YP_004703638.1| protease Do [Pseudomonas putida S16]
gi|338839953|gb|AEJ14758.1| protease Do [Pseudomonas putida S16]
Length = 466
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 137 VALLKVEG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 188
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 189 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 223
>gi|413963507|ref|ZP_11402734.1| protease Do [Burkholderia sp. SJ98]
gi|413929339|gb|EKS68627.1| protease Do [Burkholderia sp. SJ98]
Length = 501
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K LP + + N K G ++A+GSP+G F N+V+ G S +
Sbjct: 173 SDVAVLKIDA--KSLPTVKIGDPNGSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 224
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 225 RALPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINE- 283
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
A D L+K H+++G L
Sbjct: 284 AIKVKDALIKTG-------HVDRGRL 302
>gi|398846518|ref|ZP_10603487.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM84]
gi|398252479|gb|EJN37667.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM84]
Length = 477
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 147 VALLKVEG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 198
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 199 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 233
>gi|170720256|ref|YP_001747944.1| protease Do [Pseudomonas putida W619]
gi|363579860|sp|B1J4D7.1|DEGPL_PSEPW RecName: Full=Probable periplasmic serine endoprotease DegP-like;
AltName: Full=Protease Do; Flags: Precursor
gi|169758259|gb|ACA71575.1| protease Do [Pseudomonas putida W619]
Length = 479
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 234
>gi|17549771|ref|NP_523111.1| protease signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17432026|emb|CAD18703.1| probable protease signal peptide protein [Ralstonia solanacearum
GMI1000]
Length = 490
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +++ +LP + + +P K G+ +LA+GSP+G F N+V+ G S +
Sbjct: 167 SDVAVLRIAA--SNLPTVQIGSPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKS 218
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + +GI
Sbjct: 219 RSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGI 255
>gi|404378960|ref|ZP_10984036.1| protease Do [Simonsiella muelleri ATCC 29453]
gi|294483203|gb|EFG30889.1| protease Do [Simonsiella muelleri ATCC 29453]
Length = 492
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S +A+L + + DLP + + K G+ + A+G+PFG F NSV+ G
Sbjct: 164 SDDKSDIALLKIEAT--DLPAAKIGKADELKSGEWVAAIGAPFG------FDNSVTAGIV 215
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F H VGI
Sbjct: 216 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLKGHVVGI 256
>gi|93004988|ref|YP_579425.1| peptidase S1C, Do [Psychrobacter cryohalolentis K5]
gi|92392666|gb|ABE73941.1| Peptidase S1C, Do [Psychrobacter cryohalolentis K5]
Length = 485
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S S VA+L V+ K P + + N K G+ +LA+GSPFG + S + S
Sbjct: 152 SDERSDVAVLKVTG--KKFPALPIGDSNSLKVGEPVLAIGSPFG----FDYSASAGIVSA 205
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ R T+ + D+ PG GGP+F + +GI
Sbjct: 206 KSRNFSRETSVPFIQTDVALNPGNSGGPLFNQRGEVIGI 244
>gi|415960663|ref|ZP_11557679.1| serine protease, DO/DeqQ family protein, partial [Acidithiobacillus
sp. GGI-221]
gi|339832680|gb|EGQ60580.1| serine protease, DO/DeqQ family protein [Acidithiobacillus sp.
GGI-221]
Length = 273
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 227 KDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRSTTRSLL 282
K+LP + + + K G LLAVG+PFG F+N+V+ G V+ N P +
Sbjct: 147 KNLPTVPIGNSDDLKVGQWLLAVGAPFG------FYNTVTQGVVSAMNRPLPDDEYIPFI 200
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGI 307
+D+ PG GGP+F + +GI
Sbjct: 201 QSDVPINPGNSGGPLFNMNGQVIGI 225
>gi|386336539|ref|YP_006032709.1| periplasmic protease; contains two pdz domain [Ralstonia
solanacearum Po82]
gi|334198988|gb|AEG72172.1| periplasmic protease; contains two pdz domain [Ralstonia
solanacearum Po82]
Length = 519
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY---------LKDLPNIAL- 234
+ S+ + L +H +E N+ L + + +LGV +LP + +
Sbjct: 156 VSSDGLILTNAHVVDGAQEV-NVKLTDRREFKAKVLGVDKQSDVAVLRIAAGNLPTVQIG 214
Query: 235 TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
P K G+ +LA+GSP+G F N+V+ G S + P T + D+ PG
Sbjct: 215 NPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNPG 268
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F + +GI
Sbjct: 269 NSGGPLFNQRGEVIGI 284
>gi|344170434|emb|CCA82848.1| periplasmic protease; contains two PDZ domain [blood disease
bacterium R229]
Length = 490
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +++ ++LP + + P K G+ LA+GSP+G F N+V+ G S +
Sbjct: 167 SDVAVLRIAA--RNLPTVQIGNPAGTKVGEPALAIGSPYG------FENTVTAGIVSAKS 218
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + +GI
Sbjct: 219 RSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGI 255
>gi|301131510|gb|ADK62715.1| MucD [Pseudomonas alkylphenolia]
Length = 301
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 234
>gi|451812311|ref|YP_007448765.1| serine protease [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778213|gb|AGF49161.1| serine protease [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 492
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+ +A+L + S +I L K+G +LA+GSPFG+ S +V+ G V+
Sbjct: 163 TDIALLKIDSKNTKPVSIGRVDLVKKGQWVLAIGSPFGLDS------TVTAGIVSAIGRD 216
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIATAC 333
S + AD+ PG GGP+ + +G+ + + + G I L IP +
Sbjct: 217 TGEYLSFIQADVAVNPGNSGGPLLNLNGEVIGVNSQIISRSGGFMGISLSIPIDEAMRVA 276
Query: 334 SDLLL 338
L L
Sbjct: 277 DQLRL 281
>gi|300698225|ref|YP_003748886.1| periplasmic protease; contains two PDZ domain [Ralstonia
solanacearum CFBP2957]
gi|299074949|emb|CBJ54518.1| periplasmic protease; contains two PDZ domain [Ralstonia
solanacearum CFBP2957]
Length = 490
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVS-----SYLK----DLPNIAL- 234
+ S+ + L +H +E N+ L + + +LGV + L+ +LP + +
Sbjct: 127 VSSDGLILTNAHVVDGAQEV-NVKLTDRREFKAKVLGVDKQSDVAVLRIAAGNLPTVQIG 185
Query: 235 TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
P K G+ +LA+GSP+G F N+V+ G S + P T + D+ PG
Sbjct: 186 NPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNPG 239
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F + +GI
Sbjct: 240 NSGGPLFNQRGEVIGI 255
>gi|421896488|ref|ZP_16326885.1| protease protein [Ralstonia solanacearum MolK2]
gi|206587653|emb|CAQ18235.1| protease protein [Ralstonia solanacearum MolK2]
Length = 490
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY---------LKDLPNIAL- 234
+ S+ + L +H +E N+ L + + +LGV +LP + +
Sbjct: 127 VSSDGLILTNAHVVDGAQEV-NVKLTDRREFKAKVLGVDKQSDVAVLRIAAGNLPTVQIG 185
Query: 235 TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
P K G+ +LA+GSP+G F N+V+ G S + P T + D+ PG
Sbjct: 186 NPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNPG 239
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F + +GI
Sbjct: 240 NSGGPLFNQRGEVIGI 255
>gi|83745713|ref|ZP_00942771.1| Protease Do [Ralstonia solanacearum UW551]
gi|207738716|ref|YP_002257109.1| protease protein [Ralstonia solanacearum IPO1609]
gi|83727790|gb|EAP74910.1| Protease Do [Ralstonia solanacearum UW551]
gi|206592084|emb|CAQ58990.1| protease protein [Ralstonia solanacearum IPO1609]
Length = 490
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY---------LKDLPNIAL- 234
+ S+ + L +H +E N+ L + + +LGV +LP + +
Sbjct: 127 VSSDGLILTNAHVVDGAQEV-NVKLTDRREFKAKVLGVDKQSDVAVLRIAAGNLPTVQIG 185
Query: 235 TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
P K G+ +LA+GSP+G F N+V+ G S + P T + D+ PG
Sbjct: 186 NPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNPG 239
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F + +GI
Sbjct: 240 NSGGPLFNQRGEVIGI 255
>gi|410685427|ref|YP_006061434.1| periplasmic protease; contains two PDZ domain [Ralstonia
solanacearum CMR15]
gi|299069916|emb|CBJ41200.1| periplasmic protease; contains two PDZ domain [Ralstonia
solanacearum CMR15]
Length = 490
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPL-NKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +++ +LP + + +P K G+ +LA+GSP+G F N+V+ G S +
Sbjct: 167 SDVAVLRIAA--GNLPTVQIGSPAGTKVGEPVLAIGSPYG------FENTVTAGIVSAKS 218
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + +GI
Sbjct: 219 RSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGI 255
>gi|399021069|ref|ZP_10723188.1| periplasmic serine protease, Do/DeqQ family [Herbaspirillum sp.
CF444]
gi|398093053|gb|EJL83443.1| periplasmic serine protease, Do/DeqQ family [Herbaspirillum sp.
CF444]
Length = 490
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 29/185 (15%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSY---------LKDLPNIALT 235
I S+ + L +H +E + + L + + +LGV KDLP + +
Sbjct: 127 INSDGLILTNAHVVDGAQEVT-VKLTDRREFKAKVLGVDKQSDIAVIRIAAKDLPTVQIG 185
Query: 236 --PLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
L K G+ +LA+GSP+G F N+ + G S + P + D+ PG
Sbjct: 186 NPALMKVGEPVLAIGSPYG------FDNTATAGIVSAKSRSLPDDNYVPFIQTDVAVNPG 239
Query: 292 MEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
GGP+F VGI + Q G + + IP D+ +K Q + +
Sbjct: 240 NSGGPLFNLKGQVVGINSQIYSQTGGYQGLSFSIPI--------DVAMKVEQQLVQHGKV 291
Query: 351 NKGNL 355
+G L
Sbjct: 292 TRGRL 296
>gi|421522754|ref|ZP_15969394.1| protease Do [Pseudomonas putida LS46]
gi|402753247|gb|EJX13741.1| protease Do [Pseudomonas putida LS46]
Length = 467
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 138 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 189
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 190 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 224
>gi|386013636|ref|YP_005931913.1| AlgY [Pseudomonas putida BIRD-1]
gi|313500342|gb|ADR61708.1| AlgY [Pseudomonas putida BIRD-1]
Length = 467
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 138 VALLKVEG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 189
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 190 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 224
>gi|26988163|ref|NP_743588.1| protease Do [Pseudomonas putida KT2440]
gi|24982897|gb|AAN67052.1|AE016334_1 alginate biosynthesis negative regulator, serine protease AlgY
[Pseudomonas putida KT2440]
Length = 492
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 163 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 214
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 215 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 249
>gi|397693059|ref|YP_006530939.1| protease Do [Pseudomonas putida DOT-T1E]
gi|397329789|gb|AFO46148.1| protease Do [Pseudomonas putida DOT-T1E]
Length = 467
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 138 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 189
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 190 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 224
>gi|349575162|ref|ZP_08887083.1| peptidase Do [Neisseria shayeganii 871]
gi|348013170|gb|EGY52093.1| peptidase Do [Neisseria shayeganii 871]
Length = 487
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA- 269
S + S VA+L + + + + + G+ + A+G+PFG F NSV+ G V+
Sbjct: 158 SDTQSDVALLKIDAQNLQVVKVGDVKALRVGEWVAAIGAPFG------FDNSVTAGIVSA 211
Query: 270 --NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPW 326
P S + D+ PG GGP+F VGI + Q G I IP
Sbjct: 212 KGRSLPNESHMTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSQSGGFMGISFAIPI 271
Query: 327 EAIATACSDL 336
+ + L
Sbjct: 272 DVAMSVAEQL 281
>gi|325275447|ref|ZP_08141378.1| protease Do [Pseudomonas sp. TJI-51]
gi|324099423|gb|EGB97338.1| protease Do [Pseudomonas sp. TJI-51]
Length = 467
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 138 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 189
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 190 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 224
>gi|148549497|ref|YP_001269599.1| protease Do [Pseudomonas putida F1]
gi|395445146|ref|YP_006385399.1| protease Do [Pseudomonas putida ND6]
gi|363579858|sp|A5W8F5.1|DEGPL_PSEP1 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
AltName: Full=Protease Do; Flags: Precursor
gi|148513555|gb|ABQ80415.1| protease Do [Pseudomonas putida F1]
gi|388559143|gb|AFK68284.1| protease Do [Pseudomonas putida ND6]
Length = 477
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 234
>gi|339327432|ref|YP_004687125.1| serine protease do-like protein [Cupriavidus necator N-1]
gi|338167589|gb|AEI78644.1| serine protease do-like protein [Cupriavidus necator N-1]
Length = 397
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L V+ LKDLP I L L K GD++LA+G+PFGV +V+MG V
Sbjct: 157 SDPETDLAVLKVT--LKDLPAITLGRLENVKVGDVVLAIGNPFGV------GQTVTMGIV 208
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 209 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 250
>gi|113869348|ref|YP_727837.1| trypsin-like serine protease [Ralstonia eutropha H16]
gi|113528124|emb|CAJ94469.1| Trypsin-like serine protease, typically periplasmic, contains
C-terminal PDZ domain [Ralstonia eutropha H16]
Length = 397
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L V+ LKDLP I L L K GD++LA+G+PFGV +V+MG V
Sbjct: 157 SDPETDLAVLKVT--LKDLPAITLGRLENVKVGDVVLAIGNPFGV------GQTVTMGIV 208
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 209 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 250
>gi|104783266|ref|YP_609764.1| serine protease MucD [Pseudomonas entomophila L48]
gi|95112253|emb|CAK16980.1| serine protease MucD [Pseudomonas entomophila L48]
Length = 479
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVEG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 234
>gi|89093963|ref|ZP_01166908.1| Peptidase S1 and S6, chymotrypsin/Hap [Neptuniibacter caesariensis]
gi|89081849|gb|EAR61076.1| Peptidase S1 and S6, chymotrypsin/Hap [Neptuniibacter caesariensis]
Length = 381
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGV--LSPMHFFNSVSMGSVA-NC 271
+A+L V+ L DLP+I L + ++ GD++LA+G+PFGV M ++ SV N
Sbjct: 156 LAVLKVT--LNDLPSITLAKSDTHRVGDVVLAIGNPFGVGQTVTMGIISATGRNSVGLNT 213
Query: 272 YPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIA 330
Y + D PG GG + + + +GI + G++ I IP
Sbjct: 214 Y------EDFIQTDAAINPGNSGGALIDAYGNLIGINTAIFSKSGGSQGIGFAIPSNLTK 267
Query: 331 TACSDLL 337
DL+
Sbjct: 268 QVMLDLI 274
>gi|194290939|ref|YP_002006846.1| membrane associated serine endoprotease [Cupriavidus taiwanensis
LMG 19424]
gi|193224774|emb|CAQ70785.1| membrane associated serine endoprotease [Cupriavidus taiwanensis
LMG 19424]
Length = 397
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L V+ LKDLP I L L K GD++LA+G+PFGV +V+MG V
Sbjct: 157 SDPETDLAVLKVT--LKDLPAITLGRLENVKVGDVVLAIGNPFGV------GQTVTMGIV 208
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 209 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 250
>gi|407716333|ref|YP_006837613.1| Serine protease MucD/AlgY associated with sigma factor RpoE
[Cycloclasticus sp. P1]
gi|407256669|gb|AFT67110.1| Serine protease MucD/AlgY associated with sigma factor RpoE
[Cycloclasticus sp. P1]
Length = 465
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + VA+L V + KDLP + L K G+ + A+GSPFG F +SV+ G
Sbjct: 133 SDERTDVALLKVDA--KDLPVVKLGSSKSLKVGEWVFAIGSPFG------FDSSVTAGIV 184
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P+ + D+ PG GGP+F VGI
Sbjct: 185 SAKGRSLPKENYVPFIQTDVAINPGNSGGPLFNLEGEVVGI 225
>gi|40063421|gb|AAR38232.1| MucD protein [uncultured marine bacterium 580]
Length = 466
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 217 VAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA---NC 271
VA+L + + K+LP + L P N K G+ + A+GSPFG+ N++++G V+
Sbjct: 139 VALLKIDA--KNLPAVKLGNPKNIKVGEWVAAIGSPFGLE------NTMTVGVVSAKGRA 190
Query: 272 YPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F + +GI
Sbjct: 191 LPQQENYVPFIQTDVAINPGNSGGPLFNTNGEVIGI 226
>gi|121605998|ref|YP_983327.1| protease Do [Polaromonas naphthalenivorans CJ2]
gi|120594967|gb|ABM38406.1| protease Do [Polaromonas naphthalenivorans CJ2]
Length = 504
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
L + + + +A+L +++ + + T K G+ +LA+GSPFG F N+V+ G V
Sbjct: 174 LGADARTDIAVLKIAASNLPVATLGKTSDLKVGEWVLAIGSPFG------FENTVTAGVV 227
Query: 269 A--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ P + + D+ PG GGP+F VGI
Sbjct: 228 SAKGRSLPDDSAVPFIQTDVAINPGNSGGPLFNARGEVVGI 268
>gi|398810340|ref|ZP_10569163.1| periplasmic serine protease, Do/DeqQ family [Variovorax sp. CF313]
gi|398083195|gb|EJL73917.1| periplasmic serine protease, Do/DeqQ family [Variovorax sp. CF313]
Length = 494
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + + +A+L + + K LP +AL T K G+ +LA+GSPFG F N+V+ G
Sbjct: 163 LGADAKTDIAVLKIDA--KSLPVLALGNTKDLKVGEWVLAIGSPFG------FENTVTAG 214
Query: 267 SVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
V+ P + + D+ PG GGP+ VGI
Sbjct: 215 VVSAKGRSLPDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGI 257
>gi|421862900|ref|ZP_16294603.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379627|emb|CBX21798.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 499
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 12/131 (9%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + KDLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TKDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTAGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + + D+ PG GGP+F VGI + + G I IP
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQKYSRSGGFMGISFAIP 279
Query: 326 WEAIATACSDL 336
+ L
Sbjct: 280 IDVAMNVAEQL 290
>gi|399910404|ref|ZP_10778718.1| protease Do [Halomonas sp. KM-1]
Length = 477
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ + + VA+L V + DLP + + ++ G+ + A+GSPFG F +SV+ G
Sbjct: 141 ADTQTDVALLKVDA--SDLPTLRMGDSDRLRVGEWVAAIGSPFG------FDHSVTAGII 192
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S N PR + D+ PG GGP+F VGI
Sbjct: 193 SAINRTLPRDAYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 233
>gi|406999905|gb|EKE17380.1| hypothetical protein ACD_10C00474G0001, partial [uncultured
bacterium]
Length = 353
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 187 SNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLL 244
+NKI++ + + E S + S + VA+L + + LP I + NK G+ +
Sbjct: 106 ANKITVRLTDK----REFSAKVIGSDKRTDVALLKIEA--AGLPKINVGDPNKLKVGEWV 159
Query: 245 LAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHA 302
+A+GSPFG F +SV+ G S P+ + D+ PG GGP+F +
Sbjct: 160 VAIGSPFG------FDSSVTAGIVSAKGRSLPQDNFVPFIQTDVAINPGNSGGPLFNMNG 213
Query: 303 HFVGILIRPLRQKSGAEIQL--VIPWEAIATACSDLL 337
VGI + + +SG + L IP + +AT +D L
Sbjct: 214 EVVGINSQ-IYTRSGGSMGLSFAIPID-VATQVTDQL 248
>gi|402816054|ref|ZP_10865645.1| putative serine protease HtrA [Paenibacillus alvei DSM 29]
gi|402505958|gb|EJW16482.1| putative serine protease HtrA [Paenibacillus alvei DSM 29]
Length = 544
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 68/167 (40%), Gaps = 30/167 (17%)
Query: 186 ESNKISLMESHRPFAME---ESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL--TPLNKR 240
E+ ++ + S P E +S +L L A+L + S DLP ++L + +
Sbjct: 283 ETIQVQVEGSKEPLKAELLGQSKDLDL--------AVLKIKSN-GDLPTVSLGNSDATQI 333
Query: 241 GDLLLAVGSP--------FGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGM 292
GD L+A+G+P GVLS +V A Y + LL D PG
Sbjct: 334 GDWLVAIGNPSGFDHTVTVGVLSARERKINVDDNGSAREY------QHLLQTDASINPGN 387
Query: 293 EGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLK 339
GGP+ +G+ + RQ G I IP I+ DL K
Sbjct: 388 SGGPLLNMQGEVIGMNVAVSRQAQG--IGFAIPSNVISKVVEDLKNK 432
>gi|295677561|ref|YP_003606085.1| protease Do [Burkholderia sp. CCGE1002]
gi|295437404|gb|ADG16574.1| protease Do [Burkholderia sp. CCGE1002]
Length = 508
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L +++ DLP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 182 SDVAVLKINA--SDLPTVKIGDPRQSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 233
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 234 RTLPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPISEA 293
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
DL+ K H+++G L
Sbjct: 294 IKVKDDLV--------KTGHVSRGRL 311
>gi|293604229|ref|ZP_06686637.1| HtrA/DegQ/DegS family serine protease [Achromobacter piechaudii
ATCC 43553]
gi|292817454|gb|EFF76527.1| HtrA/DegQ/DegS family serine protease [Achromobacter piechaudii
ATCC 43553]
Length = 490
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + + K+LP + + +N+ G+ +LA+GSP+G N+ + G S
Sbjct: 169 VAVLKIDA--KNLPVVKVGDVNQLQVGEWVLAIGSPYG------LENTATAGIVSAKGRS 220
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T+ + D+ PG GGP+F + VGI
Sbjct: 221 LPDDTSVPFIQTDVAVNPGNSGGPLFNDRGEVVGI 255
>gi|325266523|ref|ZP_08133200.1| S1C subfamily peptidase MucD [Kingella denitrificans ATCC 33394]
gi|324981966|gb|EGC17601.1| S1C subfamily peptidase MucD [Kingella denitrificans ATCC 33394]
Length = 512
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 83/203 (40%), Gaps = 42/203 (20%)
Query: 113 RSEKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNN 172
RS +E D+D S + IP S L S EA+ G E G+ L +
Sbjct: 104 RSAQESADIDAFSDFFKRI-------IPDDSDGLDSDNEANFGSGVIISEDGYILTNTH- 155
Query: 173 SSQPLMGVVKTSIESNKISLMESH----RPFAMEESSNLSLMSKSTSR--VAILGVSSYL 226
VVK +++ KI+L + + +E S+++L+ + VA LG S L
Sbjct: 156 -------VVK-DMDNIKITLNDKREYPAKLIGADEKSDIALLKIDAADLPVAKLGNPSEL 207
Query: 227 KDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMA 284
K G+ + A+G+PFG F NSV+ G S N P +
Sbjct: 208 K------------SGEWVAAIGAPFG------FDNSVTAGIVSAKNRTLPNENYTPFIQT 249
Query: 285 DIRCLPGMEGGPVFGEHAHFVGI 307
D+ PG GGP+F VGI
Sbjct: 250 DVAINPGNSGGPLFNLRGQVVGI 272
>gi|153004908|ref|YP_001379233.1| protease Do [Anaeromyxobacter sp. Fw109-5]
gi|152028481|gb|ABS26249.1| protease Do [Anaeromyxobacter sp. Fw109-5]
Length = 525
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYP- 273
VA++ + + KDLPN+ L + ++GD +LA+GSPFG+ ++ ++G V+ +
Sbjct: 184 VALIRLVNPPKDLPNVVLGDSDALRQGDFVLALGSPFGLR------DTATLGIVSAKHRR 237
Query: 274 ---PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
P T + D G GGP+F +GI + + G+ + +P
Sbjct: 238 EVNPTGTYDDFIQTDAAINSGNSGGPLFNLRGEVIGINTAIVSPQLGSGVGFAVP 292
>gi|372488332|ref|YP_005027897.1| trypsin-like serine protease with C-terminal PDZ domain
[Dechlorosoma suillum PS]
gi|359354885|gb|AEV26056.1| trypsin-like serine protease with C-terminal PDZ domain
[Dechlorosoma suillum PS]
Length = 472
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SV 268
S T+ +A+L ++ L + + + GD + AVGSPFG +SVS G S
Sbjct: 133 SDDTTDIAVLKTTAPLAPPVPLGSSKELRPGDPVFAVGSPFG------LAHSVSAGIVSA 186
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWE 327
+ + P + + L D PG GGP+F VGI + G I IP E
Sbjct: 187 SGRFLPSNPHVAFLQTDAAINPGNSGGPLFDAEGRLVGINSMSFSRSGGYTNIGFAIPVE 246
Query: 328 AIATACSDLLLKEPQ 342
A + +L+++ Q
Sbjct: 247 E-ARRVAAILIRDGQ 260
>gi|359798509|ref|ZP_09301080.1| serine protease MucD 2 [Achromobacter arsenitoxydans SY8]
gi|359363331|gb|EHK65057.1| serine protease MucD 2 [Achromobacter arsenitoxydans SY8]
Length = 480
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA++ + + K+LP + + +N+ G+ +LA+GSP+G N+ + G S
Sbjct: 159 VAVIKIEA--KNLPVVKVGDVNRLQVGEWVLAIGSPYG------LENTATAGIVSAKGRS 210
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T+ + D+ PG GGP+F + VGI
Sbjct: 211 LPDDTSVPFIQTDVAVNPGNSGGPLFNDRGEVVGI 245
>gi|399519919|ref|ZP_10760710.1| peptidase S1C, Do [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112316|emb|CCH37269.1| peptidase S1C, Do [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 474
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V K+LP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 142 SDVALLKVEG--KNLPVVRLGKADDLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 193
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAI 329
P + + D+ PG GGP+F VGI + + G + IP E +
Sbjct: 194 RNLPSDSYVPFIQTDVAINPGNSGGPLFNLQGEVVGINSQIFTRSGGFMGLSFAIPME-V 252
Query: 330 ATACSDLL 337
A +D L
Sbjct: 253 AMQVADQL 260
>gi|359783021|ref|ZP_09286239.1| serine protease MucD precursor [Pseudomonas psychrotolerans L19]
gi|359369167|gb|EHK69740.1| serine protease MucD precursor [Pseudomonas psychrotolerans L19]
Length = 474
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + + KDLP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 144 VALLKIDA--KDLPTLKLGNSDQLKVGEWVLAIGSPFG------FDHSVTAGIVSAKGRS 195
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 196 LPNESYVPFIQTDVAINPGNSGGPLFNLKGEVVGI 230
>gi|359786276|ref|ZP_09289412.1| protease Do [Halomonas sp. GFAJ-1]
gi|359296390|gb|EHK60642.1| protease Do [Halomonas sp. GFAJ-1]
Length = 469
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA- 269
S S + VA+L + + + N+ + + G+ + A+GSPFG F SV+ G V+
Sbjct: 138 SDSQTDVALLKIDANNLPVLNLGDSDELRVGEWVAAIGSPFG------FDYSVTAGIVSA 191
Query: 270 -NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
N PR + D+ PG GGP+F VGI
Sbjct: 192 INRTLPRDAYVPFIQTDVAINPGNSGGPLFNLQGEVVGI 230
>gi|197122475|ref|YP_002134426.1| protease Do [Anaeromyxobacter sp. K]
gi|196172324|gb|ACG73297.1| protease Do [Anaeromyxobacter sp. K]
Length = 523
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA++ + + K+LP + L + ++GD +LA+GSPFG+ ++ ++G V A P
Sbjct: 177 VALIQLVNPPKNLPTVVLGDSDALRQGDFVLALGSPFGLR------DTATLGIVSAKHRP 230
Query: 274 ---PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
P T + D PG GGP+F VGI + + G I +P
Sbjct: 231 GINPGGTYDDFIQTDAAINPGNSGGPLFNLRGEVVGINTAIVSPQIGQGIGFAVP 285
>gi|220917263|ref|YP_002492567.1| protease Do [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955117|gb|ACL65501.1| protease Do [Anaeromyxobacter dehalogenans 2CP-1]
Length = 524
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA++ + + K+LP + L + ++GD +LA+GSPFG+ ++ ++G V A P
Sbjct: 178 VALIQLVNPPKNLPTVVLGDSDALRQGDFVLALGSPFGLR------DTATLGIVSAKHRP 231
Query: 274 ---PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
P T + D PG GGP+F VGI + + G I +P
Sbjct: 232 GINPGGTYDDFIQTDAAINPGNSGGPLFNLRGEVVGINTAIVSPQIGQGIGFAVP 286
>gi|94312164|ref|YP_585374.1| Trypsin-like serine protease (contains C-terminal PDZ domain)
[Cupriavidus metallidurans CH34]
gi|93356016|gb|ABF10105.1| Trypsin-like serine protease (contains C-terminal PDZ domain)
[Cupriavidus metallidurans CH34]
Length = 398
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L V+ LKDLP I L + K GD++LA+G+PFGV +V+MG V
Sbjct: 158 SDPETDLAVLKVT--LKDLPAITLGRIENVKVGDVVLAIGNPFGV------GQTVTMGIV 209
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 210 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 251
>gi|336119180|ref|YP_004573955.1| peptidase S1 family protein [Microlunatus phosphovorus NM-1]
gi|334686967|dbj|BAK36552.1| peptidase S1 family protein [Microlunatus phosphovorus NM-1]
Length = 292
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 386 SPLPI----QKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKTTVSGWRN 441
+PLP+ Q+ SV LIT G SGV++ND GL+LT H++ G R
Sbjct: 88 TPLPVPVLYQQVAPSVVLITTTKGSLGSGVIVNDSGLVLTAHHVIS---------GGGRI 138
Query: 442 GVSFQPEDSASSGHTGVDQYQKSQTL-PPKMPKIVDSSV 479
+ F A++ + TL P K+P++V +V
Sbjct: 139 SILFADGTKATAKVAATNPKSDIATLMPAKLPEVVVPAV 177
>gi|86158196|ref|YP_464981.1| peptidase S1C, Do [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774707|gb|ABC81544.1| peptidase S1C, Do [Anaeromyxobacter dehalogenans 2CP-C]
Length = 524
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA++ + + K+LP + L + ++GD +LA+GSPFG+ ++ ++G V A P
Sbjct: 178 VALIQLVNPPKNLPTVVLGDSDALRQGDFVLALGSPFGLR------DTATLGIVSAKHRP 231
Query: 274 ---PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
P T + D PG GGP+F VGI + + G I +P
Sbjct: 232 GINPGGTYDDFIQTDAAINPGNSGGPLFNLRGEVVGINTAIVSPQIGQGIGFAVP 286
>gi|430805832|ref|ZP_19432947.1| Trypsin-like serine protease (contains C-terminal PDZ domain)
[Cupriavidus sp. HMR-1]
gi|429501991|gb|ELA00315.1| Trypsin-like serine protease (contains C-terminal PDZ domain)
[Cupriavidus sp. HMR-1]
Length = 398
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L V+ LKDLP I L + K GD++LA+G+PFGV +V+MG V
Sbjct: 158 SDPETDLAVLKVT--LKDLPAITLGRIENVKVGDVVLAIGNPFGV------GQTVTMGIV 209
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 210 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 251
>gi|152988178|ref|YP_001350095.1| serine protease MucD [Pseudomonas aeruginosa PA7]
gi|119632849|gb|ABL84422.1| MucD [Pseudomonas aeruginosa]
gi|150963336|gb|ABR85361.1| serine protease MucD precursor [Pseudomonas aeruginosa PA7]
Length = 474
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 231
>gi|296390884|ref|ZP_06880359.1| serine protease MucD precursor [Pseudomonas aeruginosa PAb1]
gi|416876833|ref|ZP_11919467.1| serine protease MucD precursor [Pseudomonas aeruginosa 152504]
gi|334840286|gb|EGM18944.1| serine protease MucD precursor [Pseudomonas aeruginosa 152504]
Length = 467
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 136 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 187
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 188 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 224
>gi|333901422|ref|YP_004475295.1| protease Do [Pseudomonas fulva 12-X]
gi|363579856|sp|F6AA62.1|DEGPL_PSEF1 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
AltName: Full=Protease Do; Flags: Precursor
gi|333116687|gb|AEF23201.1| protease Do [Pseudomonas fulva 12-X]
Length = 479
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V + DLP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 147 SDVALLKVEA--NDLPTVKLGNSDNLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 198
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 199 RSLPNESYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 235
>gi|47565282|ref|ZP_00236324.1| serine protease DO [Bacillus cereus G9241]
gi|47557636|gb|EAL15962.1| serine protease DO [Bacillus cereus G9241]
Length = 266
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY----------PPRSTTRSLLMADIRC 288
K GD + A+GSP G++ +V+ G ++N P + + L+ D
Sbjct: 160 KTGDRVFAIGSPLGLIG------TVTSGIISNTNRTITKSLNDDDPLNQEKELIQTDAAT 213
Query: 289 LPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL 336
PG GG +F + +GI + + + + I IP + + D+
Sbjct: 214 NPGNNGGGLFDINGKLIGITSQKISKTNIEGISFAIPISIVRKSIQDI 261
>gi|386060333|ref|YP_005976855.1| serine protease MucD [Pseudomonas aeruginosa M18]
gi|347306639|gb|AEO76753.1| serine protease MucD precursor [Pseudomonas aeruginosa M18]
Length = 464
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 133 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 184
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 185 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 221
>gi|298369899|ref|ZP_06981215.1| S1C (protease Do) subfamily peptidase MucD [Neisseria sp. oral
taxon 014 str. F0314]
gi|298281359|gb|EFI22848.1| S1C (protease Do) subfamily peptidase MucD [Neisseria sp. oral
taxon 014 str. F0314]
Length = 498
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 14/134 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA++ + + KDLP + + P + K G+ + A+G+PFG F NS++ G
Sbjct: 167 SDQQSDVALIKIDA--KDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSITAGIV 218
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F VGI + + G I IP
Sbjct: 219 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIP 278
Query: 326 WEAIATACSDLLLK 339
+ +A +D + K
Sbjct: 279 ID-VAMNVADQIKK 291
>gi|392985754|ref|YP_006484341.1| serine protease MucD [Pseudomonas aeruginosa DK2]
gi|419752736|ref|ZP_14279142.1| serine protease MucD [Pseudomonas aeruginosa PADK2_CF510]
gi|384400866|gb|EIE47223.1| serine protease MucD [Pseudomonas aeruginosa PADK2_CF510]
gi|392321259|gb|AFM66639.1| serine protease MucD precursor [Pseudomonas aeruginosa DK2]
gi|453044574|gb|EME92297.1| serine protease MucD [Pseudomonas aeruginosa PA21_ST175]
Length = 467
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 136 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 187
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 188 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 224
>gi|418589139|ref|ZP_13153068.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P2]
gi|421515386|ref|ZP_15962072.1| serine protease MucD [Pseudomonas aeruginosa PAO579]
gi|375052031|gb|EHS44491.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P2]
gi|404349114|gb|EJZ75451.1| serine protease MucD [Pseudomonas aeruginosa PAO579]
Length = 467
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 136 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 187
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 188 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 224
>gi|107100227|ref|ZP_01364145.1| hypothetical protein PaerPA_01001250 [Pseudomonas aeruginosa PACS2]
gi|451987663|ref|ZP_21935816.1| HtrA protease/chaperone protein [Pseudomonas aeruginosa 18A]
gi|451754653|emb|CCQ88339.1| HtrA protease/chaperone protein [Pseudomonas aeruginosa 18A]
Length = 464
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 133 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 184
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 185 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 221
>gi|15595963|ref|NP_249457.1| serine protease MucD [Pseudomonas aeruginosa PAO1]
gi|254245021|ref|ZP_04938343.1| serine protease MucD precursor [Pseudomonas aeruginosa 2192]
gi|418586880|ref|ZP_13150917.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P1]
gi|421155068|ref|ZP_15614554.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 14886]
gi|421182263|ref|ZP_15639745.1| serine protease MucD precursor [Pseudomonas aeruginosa E2]
gi|9946654|gb|AAG04155.1|AE004511_8 serine protease MucD precursor [Pseudomonas aeruginosa PAO1]
gi|1184684|gb|AAC43676.1| MucD [Pseudomonas aeruginosa PAO1]
gi|1220194|gb|AAC43718.1| MucD [Pseudomonas aeruginosa PAO1]
gi|126198399|gb|EAZ62462.1| serine protease MucD precursor [Pseudomonas aeruginosa 2192]
gi|157004259|gb|ABV00672.1| MucD [Pseudomonas aeruginosa]
gi|375042499|gb|EHS35148.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P1]
gi|404521099|gb|EKA31728.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 14886]
gi|404542423|gb|EKA51743.1| serine protease MucD precursor [Pseudomonas aeruginosa E2]
Length = 474
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 231
>gi|254239129|ref|ZP_04932452.1| serine protease MucD precursor [Pseudomonas aeruginosa C3719]
gi|416858210|ref|ZP_11913206.1| serine protease MucD precursor [Pseudomonas aeruginosa 138244]
gi|420141308|ref|ZP_14649000.1| serine protease MucD precursor [Pseudomonas aeruginosa CIG1]
gi|421158831|ref|ZP_15618027.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 25324]
gi|424939810|ref|ZP_18355573.1| serine protease MucD precursor [Pseudomonas aeruginosa NCMG1179]
gi|126171060|gb|EAZ56571.1| serine protease MucD precursor [Pseudomonas aeruginosa C3719]
gi|334839722|gb|EGM18397.1| serine protease MucD precursor [Pseudomonas aeruginosa 138244]
gi|346056256|dbj|GAA16139.1| serine protease MucD precursor [Pseudomonas aeruginosa NCMG1179]
gi|403245952|gb|EJY59716.1| serine protease MucD precursor [Pseudomonas aeruginosa CIG1]
gi|404549257|gb|EKA58170.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 25324]
Length = 474
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 231
>gi|333375166|ref|ZP_08466990.1| S1C subfamily peptidase MucD [Kingella kingae ATCC 23330]
gi|332971583|gb|EGK10533.1| S1C subfamily peptidase MucD [Kingella kingae ATCC 23330]
Length = 488
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S +A+L +++ DLP I K G+ + A+G+PFG F NSV+ G
Sbjct: 157 SDEKSDIALLKIAA--SDLPVAKIGSPSELKSGEWVAAIGAPFG------FDNSVTAGIV 208
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S N P + D+ PG GGP+F VGI
Sbjct: 209 SAKNRTLPNENYMPFIQTDVAINPGNSGGPLFNLKGQVVGI 249
>gi|313668987|ref|YP_004049271.1| serine protease [Neisseria lactamica 020-06]
gi|313006449|emb|CBN87912.1| putative periplasmic serine protease [Neisseria lactamica 020-06]
Length = 499
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + KDLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TKDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTAGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 260
>gi|153003780|ref|YP_001378105.1| peptidase S1 and S6 chymotrypsin/Hap [Anaeromyxobacter sp. Fw109-5]
gi|152027353|gb|ABS25121.1| peptidase S1 and S6 chymotrypsin/Hap [Anaeromyxobacter sp. Fw109-5]
Length = 303
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 210 MSKSTSRVAILGVSSYLKDLPNIALTPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
++ S +R + V + +DLP + L R G+L+LA+G+P G F SV+ G V
Sbjct: 70 LAGSDARTDLAVVRADARDLPALTLAERRLRVGELVLAIGNPLG------FERSVTSGVV 123
Query: 269 ANCYPPRSTTRS-----LLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + R L+ D PG GGP+ H VGI
Sbjct: 124 SALHRNLPAARGEVLEGLVQTDAAVNPGNSGGPLVDAHGAVVGI 167
>gi|261401293|ref|ZP_05987418.1| S1C subfamily peptidase MucD [Neisseria lactamica ATCC 23970]
gi|269208670|gb|EEZ75125.1| S1C subfamily peptidase MucD [Neisseria lactamica ATCC 23970]
Length = 499
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + KDLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TKDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTAGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 260
>gi|452876793|ref|ZP_21954129.1| serine protease MucD [Pseudomonas aeruginosa VRFPA01]
gi|452186400|gb|EME13418.1| serine protease MucD [Pseudomonas aeruginosa VRFPA01]
Length = 494
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 133 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 184
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 185 RSLPNESYVPFIQTDVAINPGNSGGPLLNLQGEVVGI 221
>gi|242013185|ref|XP_002427295.1| heat shock protein 70 HSP70 interacting protein, putative
[Pediculus humanus corporis]
gi|212511636|gb|EEB14557.1| heat shock protein 70 HSP70 interacting protein, putative
[Pediculus humanus corporis]
Length = 1007
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 240 RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFG 299
RG + + +PFG F NS+S G ++N L++ D R +PG EG P+F
Sbjct: 186 RGREIKIISTPFG---NDLFINSLSSGIISNLV---GIENCLILTDARTVPGCEGAPIFS 239
Query: 300 -------EHAHFVGILIRPL 312
++ + +G++I PL
Sbjct: 240 SMKSRYDDNNNLIGLVICPL 259
>gi|423016437|ref|ZP_17007158.1| serine protease MucD 2 [Achromobacter xylosoxidans AXX-A]
gi|338780584|gb|EGP44990.1| serine protease MucD 2 [Achromobacter xylosoxidans AXX-A]
Length = 488
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 20/136 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYL---------KDLPNIALT 235
+ S+ + L +H +E + + L + R +LG K+LP + +
Sbjct: 125 VSSDGVILTNAHVVQGAKEVT-VKLTDRREFRAKVLGADPQTDVAVIKIDAKNLPVVKVG 183
Query: 236 PLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
+N+ G+ +LA+GSP+G N+ + G S P T+ + D+ PG
Sbjct: 184 DVNQLQVGEWVLAIGSPYG------LENTATAGIVSAKGRSLPDDTSVPFIQTDVAVNPG 237
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+F + VGI
Sbjct: 238 NSGGPLFNDRGEVVGI 253
>gi|335428857|ref|ZP_08555767.1| Trypsin-like protein serine protease, contains C-terminal PDZ
domain, Do-like protein [Haloplasma contractile SSD-17B]
gi|335429291|ref|ZP_08556191.1| Trypsin-like protein serine protease, contains C-terminal PDZ
domain, Do-like protein [Haloplasma contractile SSD-17B]
gi|334890082|gb|EGM28361.1| Trypsin-like protein serine protease, contains C-terminal PDZ
domain, Do-like protein [Haloplasma contractile SSD-17B]
gi|334891798|gb|EGM30044.1| Trypsin-like protein serine protease, contains C-terminal PDZ
domain, Do-like protein [Haloplasma contractile SSD-17B]
Length = 378
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC--YPPRSTTR--------SLLMADIRC 288
+RG L+LA+G+P G FF SV+MG V+ Y T +LL D
Sbjct: 166 ERGQLVLAIGNPDG----YDFFGSVTMGVVSGLTRYISMDTDADGIQDWEANLLQHDAAI 221
Query: 289 LPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL 336
PG GG +F + + +GI + + + + I IP + ++L
Sbjct: 222 SPGNSGGALFDINGNVIGINNMKIVKDAVSNIGFAIPSNLVKRITAEL 269
>gi|344199892|ref|YP_004784218.1| protease Do [Acidithiobacillus ferrivorans SS3]
gi|343775336|gb|AEM47892.1| protease Do [Acidithiobacillus ferrivorans SS3]
Length = 494
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA+L + + K+LP + + K G +LAVGSPFG F NSV+ G V A P
Sbjct: 162 VALLKIDA--KNLPTVQIGDSGKLEVGQWVLAVGSPFG------FENSVTQGVVSATSRP 213
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F +GI
Sbjct: 214 LPDDPYIPFIQTDVPINPGNSGGPLFNMRGQVIGI 248
>gi|255019679|ref|ZP_05291758.1| Serine protease precursor MucD/AlgY associated with sigma factor
RpoE [Acidithiobacillus caldus ATCC 51756]
gi|254970902|gb|EET28385.1| Serine protease precursor MucD/AlgY associated with sigma factor
RpoE [Acidithiobacillus caldus ATCC 51756]
Length = 487
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA+L + + K+LP + + +K G +LAVG+PFG F NSV+ G V A P
Sbjct: 155 VALLKIDA--KNLPTVQIGDSSKLEVGQWVLAVGAPFG------FENSVTQGVVSATSRP 206
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 207 LPDDPYIPFIQTDVPINPGNSGGPLFNMRGQVVGI 241
>gi|218893291|ref|YP_002442160.1| serine protease MucD [Pseudomonas aeruginosa LESB58]
gi|355647242|ref|ZP_09054928.1| hypothetical protein HMPREF1030_04014 [Pseudomonas sp. 2_1_26]
gi|218773519|emb|CAW29331.1| serine protease MucD precursor [Pseudomonas aeruginosa LESB58]
gi|354828007|gb|EHF12138.1| hypothetical protein HMPREF1030_04014 [Pseudomonas sp. 2_1_26]
Length = 474
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLEGEVVGI 231
>gi|421169887|ref|ZP_15627890.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 700888]
gi|404525521|gb|EKA35786.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 700888]
Length = 474
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLEGEVVGI 231
>gi|313105588|ref|ZP_07791854.1| serine protease MucD precursor [Pseudomonas aeruginosa 39016]
gi|386064439|ref|YP_005979743.1| serine protease [Pseudomonas aeruginosa NCGM2.S1]
gi|310878356|gb|EFQ36950.1| serine protease MucD precursor [Pseudomonas aeruginosa 39016]
gi|348032998|dbj|BAK88358.1| serine protease [Pseudomonas aeruginosa NCGM2.S1]
Length = 474
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLEGEVVGI 231
>gi|269839469|ref|YP_003324161.1| PDZ/DHR/GLGF domain-containing protein [Thermobaculum terrenum ATCC
BAA-798]
gi|269791199|gb|ACZ43339.1| PDZ/DHR/GLGF domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 282
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 208 SLMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSM 265
+L+++ T R + +S L+DLP++ + + G L+LA GSPFGV + ++
Sbjct: 71 TLLARDTRR-DLAALSIPLRDLPSVEVGDSGSVRVGQLVLAAGSPFGVRDVITAGVVTAV 129
Query: 266 GSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
G V+ P S + +D+ +PG GGP+ +G+
Sbjct: 130 GPVSALRSP----LSFIQSDVSLVPGNSGGPLVDVGGKVIGL 167
>gi|116048682|ref|YP_792518.1| serine protease MucD [Pseudomonas aeruginosa UCBPP-PA14]
gi|421176242|ref|ZP_15633909.1| serine protease MucD precursor [Pseudomonas aeruginosa CI27]
gi|12963467|gb|AAK11276.1|AF343973_1 MucD [Pseudomonas aeruginosa]
gi|115583903|gb|ABJ09918.1| serine protease MucD precursor [Pseudomonas aeruginosa UCBPP-PA14]
gi|404531050|gb|EKA41016.1| serine protease MucD precursor [Pseudomonas aeruginosa CI27]
Length = 474
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + L NK G+ +LA+GSPFG F +SV+ G S
Sbjct: 143 SDVAVLKIEA--KNLPTLKLGDSNKLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+ VGI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLLNLEGEVVGI 231
>gi|149191298|ref|ZP_01869553.1| protease DegS [Vibrio shilonii AK1]
gi|148834896|gb|EDL51878.1| protease DegS [Vibrio shilonii AK1]
Length = 344
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 231 NIALTPLN-----KRGDLLLAVGSP--------FGVLSPMHFFNSVSMGSVANCYPPRST 277
N+ + PLN K GD++LA+G+P FG++S +S+S G +
Sbjct: 128 NLPVIPLNPNYSPKVGDVVLAIGNPYNLGQTTTFGIISATG-RSSISAGGI--------- 177
Query: 278 TRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIATACS 334
++ + D G GG + VGI +Q + E I IP++ +A+
Sbjct: 178 -QAFIQTDAAINQGNSGGALVNTLGELVGINTASFQQATDLETYGISFAIPYQ-LASKIM 235
Query: 335 DLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHI 368
+ ++ + + I I+ ++N+V LL N HI
Sbjct: 236 EKIIADGRVIRGYIGIDGQDINSVTARLLGNEHI 269
>gi|444918425|ref|ZP_21238496.1| HtrA protease/chaperone protein [Cystobacter fuscus DSM 2262]
gi|444709791|gb|ELW50789.1| HtrA protease/chaperone protein [Cystobacter fuscus DSM 2262]
Length = 490
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMH--FFNSVSMGSVANCY 272
VA+L + + +DLP++AL + + GD +LA+G+PFG+ S + ++ + A Y
Sbjct: 166 VAVLQLQNAPRDLPHVALGDSDAVRVGDFVLAIGNPFGLASSVSSGILSARARDIHAGPY 225
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAI 329
L D PG GGP+F +G+ +R+ +G I +P I
Sbjct: 226 ------DDFLQTDAAINPGNSGGPLFNLKGEVIGMNTAIVREATG--IGFAVPSNLI 274
>gi|392950433|ref|ZP_10315988.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
gi|392950620|ref|ZP_10316175.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
gi|391859395|gb|EIT69923.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
gi|391859582|gb|EIT70110.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
Length = 490
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 213 STSRVAILGVSSYLKDLPNIAL---TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--S 267
+ S VA+L + + +DLP + L LN G+ ++A+GSPFG F N+V+ G S
Sbjct: 163 AKSDVAVLKIDA--RDLPTVKLGNPEELNV-GEWVVAIGSPFG------FENTVTQGIVS 213
Query: 268 VANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 214 AKGRTLPDGSYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 253
>gi|381400888|ref|ZP_09925807.1| putative serine protease [Kingella kingae PYKK081]
gi|380834172|gb|EIC14021.1| putative serine protease [Kingella kingae PYKK081]
Length = 488
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S +A+L + + DLP I K G+ + A+G+PFG F NSV+ G
Sbjct: 157 SDEKSDIALLKIEA--SDLPVAKIGSPSELKSGEWVAAIGAPFG------FDNSVTAGIV 208
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S N P + D+ PG GGP+F VGI
Sbjct: 209 SAKNRTLPNENYMPFIQTDVAINPGNSGGPLFNLKGQVVGI 249
>gi|77165920|ref|YP_344445.1| peptidase S1C, Do [Nitrosococcus oceani ATCC 19707]
gi|254433307|ref|ZP_05046815.1| protease Do subfamily [Nitrosococcus oceani AFC27]
gi|76884234|gb|ABA58915.1| Peptidase S1C, Do [Nitrosococcus oceani ATCC 19707]
gi|207089640|gb|EDZ66911.1| protease Do subfamily [Nitrosococcus oceani AFC27]
Length = 471
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S +S +A+L V + KDLP + + + K G+ +LA+GSPFG F +S + G V
Sbjct: 135 SDESSDLALLKVEA--KDLPTLRQSNASQLKVGEWVLAIGSPFG------FEHSATAGIV 186
Query: 269 ANCYP--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ P + + D+ PG GGP+F VGI
Sbjct: 187 SALGRSLPEESYVPFIQTDVAINPGNSGGPLFNLMGEVVGI 227
>gi|51244160|ref|YP_064044.1| serine proteinase [Desulfotalea psychrophila LSv54]
gi|50875197|emb|CAG35037.1| related to serine proteinase [Desulfotalea psychrophila LSv54]
Length = 384
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 17/177 (9%)
Query: 156 LPEHEWEVGWSLAPYNNSSQPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTS 215
+ EHE ++ L + L + K E I + + + S + +++ +
Sbjct: 213 IAEHERQLALVLPKLSQKENELKNLEKAVTERGDIVV------YMADGSKHTGYLTQVSD 266
Query: 216 RVAILGVSSYLKDLPNIALTPLN---KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
+ +S + + I L P ++GD + +GSP G+ N+V+ G +
Sbjct: 267 HYDLALLSIFSVEHGKIPLAPAGSKLQQGDKVYTIGSPVGLQ------NTVTAGIFSGYR 320
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAI 329
+ + L D PG GGP+ E+ H GI L+ G I IP E +
Sbjct: 321 RADDSKKIYLQTDAAINPGNSGGPLIDENGHIRGINTMVLKNTEG--IGFAIPIEKV 375
>gi|443472124|ref|ZP_21062154.1| HtrA protease/chaperone protein [Pseudomonas pseudoalcaligenes
KF707]
gi|442902424|gb|ELS27983.1| HtrA protease/chaperone protein [Pseudomonas pseudoalcaligenes
KF707]
Length = 475
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V KDLP + + + K G +LA+GSPFG F +SV+ G S
Sbjct: 147 VALLKVEG--KDLPTVKIGKSDDLKVGSWVLAIGSPFG------FDHSVTAGIVSAKGRS 198
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIAT 331
P + D+ PG GGP+F VGI + + G + IP + +A
Sbjct: 199 LPNENYVPFIQTDVAINPGNSGGPLFNLDGEVVGINSQIFTRSGGFMGLSFAIPID-VAM 257
Query: 332 ACSDLLLKE 340
+D L E
Sbjct: 258 GVADQLKSE 266
>gi|340783046|ref|YP_004749653.1| Serine protease MucD/AlgY associated with sigma factor RpoE
[Acidithiobacillus caldus SM-1]
gi|340557197|gb|AEK58951.1| Serine protease precursor MucD/AlgY associated with sigma factor
RpoE [Acidithiobacillus caldus SM-1]
Length = 490
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA+L + + K+LP + + K G +LAVG+PFG F NSV+ G V A P
Sbjct: 158 VALLKIDA--KNLPTVQIGDSGKLEVGQWVLAVGAPFG------FENSVTQGVVSATSRP 209
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 210 LPDDPYIPFIQTDVPINPGNSGGPLFNMRGQVVGI 244
>gi|220932857|ref|YP_002509765.1| 2-alkenal reductase [Halothermothrix orenii H 168]
gi|219994167|gb|ACL70770.1| 2-alkenal reductase [Halothermothrix orenii H 168]
Length = 264
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 227 KDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVA----NCYPPRSTT-R 279
K+LP + L+ + G+L++A+G P G+ N++++G V+ N Y R
Sbjct: 155 KELPFLELSTSRRLRAGELVIALGYPLGLE------NTLTVGVVSALNRNIYTENGQKLR 208
Query: 280 SLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLL 337
+L+ D+ PG GGP+ + +GI +RQ G I IP + + L
Sbjct: 209 NLIQVDVAINPGNSGGPLLNDQGQVIGINTAIIRQ--GFGIGFAIPISTVRGFLENYL 264
>gi|302339205|ref|YP_003804411.1| ABC transporter [Spirochaeta smaragdinae DSM 11293]
gi|301636390|gb|ADK81817.1| ABC transporter related protein [Spirochaeta smaragdinae DSM 11293]
Length = 246
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 310 RPLRQKSGAEIQLVIPWEAIATACSDLLLKEP------QNAEKEIHINKGNLNAVGNSLL 363
RP + SG E QLV+ A+A+ CS L+L EP +N + + + +G G S++
Sbjct: 121 RPFNELSGGERQLVLIARALASECSILVLDEPTSALDFRNQSRVLQVIRGLSQEHGISVV 180
Query: 364 FNSHILNGAC 373
F +H N A
Sbjct: 181 FTTHSPNHAV 190
>gi|171463189|ref|YP_001797302.1| protease Do [Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192727|gb|ACB43688.1| protease Do [Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 474
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 185 IESNKISLMESHRPFAMEESSNL--SLMSKSTSRVAILGVSSYL---------KDLPNIA 233
IESN + L +H +E ++ + +L K + +LG+ +DLP +
Sbjct: 105 IESNGLILTNAH---VVEGATTIYVTLTDKREFKAKLLGIDKRTDVAVVKIEARDLPKLP 161
Query: 234 LTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
L +K G+ +LA+GSPFG N+V+ G V+ + D+ PG
Sbjct: 162 LGDSSKVRVGEWVLAIGSPFG------LENTVTAGIVSAKSRDTGDYLPFIQTDVAVNPG 215
Query: 292 MEGGPVFGEHAHFVGI 307
GGP+ +GI
Sbjct: 216 NSGGPLLNTAGQVIGI 231
>gi|167035370|ref|YP_001670601.1| protease Do [Pseudomonas putida GB-1]
gi|363579859|sp|B0KV30.1|DEGPL_PSEPG RecName: Full=Probable periplasmic serine endoprotease DegP-like;
AltName: Full=Protease Do; Flags: Precursor
gi|166861858|gb|ABZ00266.1| protease Do [Pseudomonas putida GB-1]
Length = 477
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVEG--KNLPIVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 234
>gi|251795308|ref|YP_003010039.1| copper amine oxidase domain-containing protein [Paenibacillus sp.
JDR-2]
gi|247542934|gb|ACS99952.1| copper amine oxidase domain protein [Paenibacillus sp. JDR-2]
Length = 515
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 24/123 (19%)
Query: 201 MEESSNLSLMSKSTSRVAILGVSSYLK--DLP------NIALTPLN--------KRGDLL 244
M+++S+ ++++ + ++ + GV +Y + DL +I TP+ K+GD +
Sbjct: 221 MQDASSATVITVNNKQIKVSGVVTYSQNNDLAIIQTDQSIGSTPVEVGYSSLNVKKGDKV 280
Query: 245 LAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHF 304
+A+GSP G+ N+VS G V+N ST A I G GG +F E+
Sbjct: 281 VAIGSPLGLQ------NTVSDGLVSNIIYDGSTRYIQTSAPIDH--GSSGGALFDEYGEL 332
Query: 305 VGI 307
VGI
Sbjct: 333 VGI 335
>gi|238022573|ref|ZP_04602999.1| hypothetical protein GCWU000324_02481 [Kingella oralis ATCC 51147]
gi|237867187|gb|EEP68229.1| hypothetical protein GCWU000324_02481 [Kingella oralis ATCC 51147]
Length = 480
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + + P R G+ + A+G+PFG F NSV+ G S N
Sbjct: 158 SDVALLKIEA--KNLPTVKIGNPDELRSGEWVAAIGAPFG------FENSVTSGIVSAKN 209
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 210 RTLPDDGYMPFIQTDVAINPGNSGGPLFNLKGQVVGI 246
>gi|73542780|ref|YP_297300.1| peptidase S1 and S6, chymotrypsin/Hap:PDZ/DHR/GLGF [Ralstonia
eutropha JMP134]
gi|72120193|gb|AAZ62456.1| Peptidase S1 and S6, chymotrypsin/Hap:PDZ/DHR/GLGF [Ralstonia
eutropha JMP134]
Length = 398
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L +S LK+LP I L L K GD++LA+G+PFGV +V+MG V
Sbjct: 157 SDPETDLAVLKIS--LKELPAITLGRLENVKVGDVVLAIGNPFGV------GQTVTMGIV 208
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 209 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 250
>gi|345863735|ref|ZP_08815943.1| periplasmic serine protease Do/DegQ family [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345878141|ref|ZP_08829866.1| cytochrome b [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344224822|gb|EGV51200.1| cytochrome b [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|345125061|gb|EGW54933.1| periplasmic serine protease Do/DegQ family [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 393
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 13/123 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + S VA+L + DLP I ++ KR GD++LA+G+PFGV +V+MG V
Sbjct: 158 SDAESDVALLKIDGE-PDLPAIPISDPEKRRIGDVVLAIGNPFGV------GQTVTMGIV 210
Query: 269 ANC---YPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVI 324
+ + + + + D PG GG + VGI + G+ I I
Sbjct: 211 SATGRHHLGINAFENFIQTDAAINPGNSGGALVNARGELVGINTAIFSRSGGSHGIGFAI 270
Query: 325 PWE 327
P+E
Sbjct: 271 PFE 273
>gi|429744483|ref|ZP_19277967.1| putative serine protease MucD [Neisseria sp. oral taxon 020 str.
F0370]
gi|429162725|gb|EKY05019.1| putative serine protease MucD [Neisseria sp. oral taxon 020 str.
F0370]
Length = 495
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + S +A+L + + DLP + + + G+ + A+G+PFG F NS++ G V
Sbjct: 163 SDTPSDLALLKIEA--ADLPTVKIGDAKALRTGEWVAAIGAPFG------FENSITAGIV 214
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ P S T + D+ PG GGP+F + VGI
Sbjct: 215 SAKGRSLPDESYT-PFIQTDVAINPGNSGGPLFNLNGQVVGI 255
>gi|254294414|ref|YP_003060437.1| protease Do [Hirschia baltica ATCC 49814]
gi|254042945|gb|ACT59740.1| protease Do [Hirschia baltica ATCC 49814]
Length = 485
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 192 LMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGS 249
++ R FA E +++ + +A+L + + + LP + +T + GDL+LA+G+
Sbjct: 133 VLADRREFAAE-----LIIADQRTDLAVLKIDTEGEALPTLEITDTRQVEVGDLVLAIGN 187
Query: 250 PFGVLSPMHFFNSVSMGSV---ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVG 306
PFGV +V+ G + A S L D PG GG + H VG
Sbjct: 188 PFGV------GQTVTTGIISAQARTDVGVSDYAFFLQTDAAINPGNSGGALVDSHGRLVG 241
Query: 307 ILIRPLRQKSGAE-IQLVIPWEAI 329
+ + G+ I IP E +
Sbjct: 242 VNTAIFSRSGGSNGIGFAIPAEMV 265
>gi|323497870|ref|ZP_08102879.1| protease DegS [Vibrio sinaloensis DSM 21326]
gi|323316915|gb|EGA69917.1| protease DegS [Vibrio sinaloensis DSM 21326]
Length = 353
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 231 NIALTPLN-----KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD 285
N+ + PLN K GD++LA+G+P+ + F + G + R ++ + D
Sbjct: 138 NLPVIPLNPDYSPKVGDIVLAIGNPYNLGQTTTFGIISATGRSSISADGR---QAFIQTD 194
Query: 286 IRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIATACSDLLLKEPQ 342
G GG + VGI +Q + E I IP+ ++A + ++ + +
Sbjct: 195 AAINEGNSGGALVNTRGELVGINTASFQQATELETYGISFAIPY-SLANKIMEKIIADGR 253
Query: 343 NAEKEIHINKGNLNAVGNSLLFNSHI 368
I I+ ++N+V + LL N H+
Sbjct: 254 VIRGYIGIDGQDINSVTSRLLGNEHL 279
>gi|452944352|ref|YP_007500517.1| protease Do [Hydrogenobaculum sp. HO]
gi|452882770|gb|AGG15474.1| protease Do [Hydrogenobaculum sp. HO]
Length = 464
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 42/211 (19%)
Query: 121 VDKGSPEWVTAQLMMLVDIPVSSLALQS----LMEA--SSGLPEHEWEVGWSLA-PYNNS 173
VDK SP VT +V P+S+ +M + +PE E ++G + Y S
Sbjct: 38 VDKVSPSVVTIYATQIVKTPLSTQIFPGFPPFMMPGIPTPEIPEKEKDLGSGIIIKYIQS 97
Query: 174 SQPLMGVVKTSIESNKISLM--------ESHRPFAMEESSNLSLMSKS-------TSRVA 218
+ + + N +M + + ++L+++ S +SRVA
Sbjct: 98 KNAFIILTNNHVVGNSKDVMVKLSRTIERKAKVLGRDPKTDLAVLEVSAEGINNPSSRVA 157
Query: 219 ILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA--NCYPPRS 276
LG SS+++ G L++A+G+P+G F +V+MG V+ N S
Sbjct: 158 TLGDSSHVRI------------GQLVIAIGNPYG------FSRTVTMGVVSALNRRLGLS 199
Query: 277 TTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ D PG GGP+ +GI
Sbjct: 200 QYEDYIQTDAAINPGNSGGPLINIEGKVIGI 230
>gi|319942118|ref|ZP_08016436.1| protease Do [Sutterella wadsworthensis 3_1_45B]
gi|319804328|gb|EFW01212.1| protease Do [Sutterella wadsworthensis 3_1_45B]
Length = 474
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 12/119 (10%)
Query: 227 KDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYP--PRSTTRSLL 282
KDLP + + N K G+ + A+GSPFG N+V+ G V+ P +
Sbjct: 165 KDLPALKMGDSNQLKVGEWVAAIGSPFG------LDNTVTAGIVSALSRNLPTDQYMPFI 218
Query: 283 MADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIATACSDLLLKE 340
D+ PG GGP+F VGI + G + IP + IA D L+K+
Sbjct: 219 QTDVAVNPGNSGGPLFNMKGEVVGINSQIFSTSGGFMGLSFAIPID-IALQVKDQLVKD 276
>gi|284114225|ref|ZP_06386639.1| serine protease MucD precursor [Candidatus Poribacteria sp. WGA-A3]
gi|283829601|gb|EFC33939.1| serine protease MucD precursor [Candidatus Poribacteria sp. WGA-A3]
Length = 390
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 239 KRGDLLLAVGSPFGVLS--PMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
+ GDL+LAVGSPFG+ S M +++ G+V + + D PG GGP
Sbjct: 73 RVGDLVLAVGSPFGLTSSVTMGIISAMGRGNVG-----ITEYEDFIQTDAPINPGNSGGP 127
Query: 297 VFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLL 337
+ VGI + G+E I IP + + L+
Sbjct: 128 LVNMAGEIVGINTAIFSRTGGSEGIGFAIPVDIVQDITGSLI 169
>gi|239815369|ref|YP_002944279.1| protease Do [Variovorax paradoxus S110]
gi|239801946|gb|ACS19013.1| protease Do [Variovorax paradoxus S110]
Length = 491
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + + + +A+L + + ++LP +AL T K G+ +LA+GSPFG F ++V+ G
Sbjct: 161 LGADAKTDIAVLKIDA--RNLPTLALGNTKDLKVGEWVLAIGSPFG------FESTVTAG 212
Query: 267 SVA--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
V+ P + + D+ PG GGP+ VGI
Sbjct: 213 VVSAKGRSLPDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGI 255
>gi|37678774|ref|NP_933383.1| protease DegS [Vibrio vulnificus YJ016]
gi|320157447|ref|YP_004189826.1| outer membrane stress sensor protease DegS [Vibrio vulnificus
MO6-24/O]
gi|37197515|dbj|BAC93354.1| protease DegS [Vibrio vulnificus YJ016]
gi|319932759|gb|ADV87623.1| outer membrane stress sensor protease DegS [Vibrio vulnificus
MO6-24/O]
Length = 355
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 231 NIALTPLN-----KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD 285
N+ + PLN K GD++LA+G+P+ + F + G + R ++ + D
Sbjct: 138 NLPVIPLNSNYKAKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGR---QAFIQTD 194
Query: 286 IRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIATACSDLLLKEPQ 342
G GG + VGI +Q + E I IP+ +A + ++ + +
Sbjct: 195 AAINEGNSGGALVNTKGELVGINTASFQQATDLETYGISFAIPFP-LANKIMEKIIADGR 253
Query: 343 NAEKEIHINKGNLNAVGNSLLFNSHI 368
I I+ ++NAV LL N HI
Sbjct: 254 VIRGYIGIDGQDINAVTARLLGNEHI 279
>gi|384085174|ref|ZP_09996349.1| serine protease MucD [Acidithiobacillus thiooxidans ATCC 19377]
Length = 501
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC---YPPRSTTRSLLMADIRCLPGMEGG 295
K G LLA+G PFG F+N+V+ G V+ P + +D+ PG GG
Sbjct: 196 KVGQWLLAIGMPFG------FYNTVTQGVVSALNRPLPHDDEYIPFIQSDVPINPGNSGG 249
Query: 296 PVFGEHAHFVGI 307
P+F VGI
Sbjct: 250 PIFNMEGQVVGI 261
>gi|261380103|ref|ZP_05984676.1| S1C subfamily peptidase MucD [Neisseria subflava NJ9703]
gi|284797322|gb|EFC52669.1| S1C subfamily peptidase MucD [Neisseria subflava NJ9703]
Length = 499
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + +DLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDAQSDVALLKIEPQ-EDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F VGI + + G I IP
Sbjct: 220 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIP 279
Query: 326 WEAIATACSDLL 337
+ +A +D L
Sbjct: 280 ID-VAMNVADQL 290
>gi|451936548|ref|YP_007460402.1| serine protease [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777471|gb|AGF48446.1| serine protease [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 494
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+ +A+L + S +I L ++G +LA+GSPFG+ S +V+ G V+
Sbjct: 165 TDIALLKIESNNTKPVSIGKVDLIRKGQWVLAIGSPFGLDS------TVTAGIVSAIGRD 218
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWE 327
S + AD+ PG GGP+ + +G+ + + + G I L IP +
Sbjct: 219 TGYYLSFIQADVAVNPGNSGGPLLNLNGEVIGVNSQIISRSGGFMGISLSIPID 272
>gi|74318109|ref|YP_315849.1| peptidase S1C, Do [Thiobacillus denitrificans ATCC 25259]
gi|74057604|gb|AAZ98044.1| peptidase S1C, Do [Thiobacillus denitrificans ATCC 25259]
Length = 464
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 217 VAILGVSSYLKDLPNIAL-TPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA++ +++ ++LP + L P R G+ + A+GSPFG F NSV+ G S
Sbjct: 138 VAVIRITA--RNLPAVRLGDPEKLRVGEAVAAIGSPFG------FENSVTAGIVSAKGRS 189
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIAT 331
P + + D+ PG GGP+F VGI + Q G + + IP + IA
Sbjct: 190 LPSESYVPFIQTDVAVNPGNSGGPLFNMRGEVVGINSQIYSQSGGYQGVAFAIPID-IAM 248
Query: 332 ACSDLL 337
D L
Sbjct: 249 EVVDQL 254
>gi|326423739|ref|NP_759592.2| periplasmic serine peptidase DegS [Vibrio vulnificus CMCP6]
gi|319999102|gb|AAO09119.2| periplasmic serine peptidase DegS [Vibrio vulnificus CMCP6]
Length = 355
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 231 NIALTPLN-----KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD 285
N+ + PLN K GD++LA+G+P+ + F + G + R ++ + D
Sbjct: 138 NLPVIPLNSNYKAKVGDVVLAIGNPYNLGQTTTFGIISATGRSSISADGR---QAFIQTD 194
Query: 286 IRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIATACSDLLLKEPQ 342
G GG + VGI +Q + E I IP+ +A + ++ + +
Sbjct: 195 AAINEGNSGGALVNTKGELVGINTASFQQATDLETYGISFAIPFP-LANKIMEKIIADGR 253
Query: 343 NAEKEIHINKGNLNAVGNSLLFNSHI 368
I I+ ++NAV LL N HI
Sbjct: 254 VIRGYIGIDGQDINAVTARLLGNEHI 279
>gi|406974303|gb|EKD97446.1| hypothetical protein ACD_23C00922G0002 [uncultured bacterium]
Length = 474
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 213 STSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SV 268
S R I + LP + + N K G+ ++A+GSPFG F NSV+ G S
Sbjct: 132 SDKRTDIALIKIEASGLPVVKMADTNQLKVGEWVVAIGSPFG------FDNSVTAGIVSA 185
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P+ + D+ PG GGP+F VGI
Sbjct: 186 KGRSLPQENYVPFIQTDVAINPGNSGGPLFNMRGEVVGI 224
>gi|374368284|ref|ZP_09626336.1| membrane associated serine endoprotease [Cupriavidus basilensis
OR16]
gi|373100165|gb|EHP41234.1| membrane associated serine endoprotease [Cupriavidus basilensis
OR16]
Length = 397
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L ++ LKDLP I L + K GD++LA+G+PFGV +V+MG V
Sbjct: 157 SDPETDLAVLKIT--LKDLPAITLGRIENVKVGDVVLAIGNPFGV------GQTVTMGIV 208
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +G+
Sbjct: 209 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGV 250
>gi|319639189|ref|ZP_07993940.1| protease DO [Neisseria mucosa C102]
gi|317399373|gb|EFV80043.1| protease DO [Neisseria mucosa C102]
Length = 499
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + +DLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDAQSDVALLKIEPQ-EDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F VGI + + G I IP
Sbjct: 220 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIP 279
Query: 326 WEAIATACSDLL 337
+ +A +D L
Sbjct: 280 ID-VAMNVADQL 290
>gi|78778479|ref|YP_396591.1| PDZ/DHR/GLGF [Prochlorococcus marinus str. MIT 9312]
gi|78711978|gb|ABB49155.1| PDZ/DHR/GLGF protein [Prochlorococcus marinus str. MIT 9312]
Length = 373
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTR--------SLLMADIRCLP 290
K GD +AVG+PFG+ N+V++G ++N R+ T+ L+ D P
Sbjct: 174 KVGDWAIAVGNPFGLE------NTVTLGIISNI--KRNVTQLGIYDKKLELIQTDAAINP 225
Query: 291 GMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIH 349
G GGP+ + +GI +R GA + IP L+ N K IH
Sbjct: 226 GNSGGPLLNSNGEVIGINTL-IRSGPGAGLSFAIPINKAKEIAYQLI-----NNGKVIH 278
>gi|374623023|ref|ZP_09695540.1| protease Do [Ectothiorhodospira sp. PHS-1]
gi|373942141|gb|EHQ52686.1| protease Do [Ectothiorhodospira sp. PHS-1]
Length = 494
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + VA+L + + +DLP + L + G+ +LA+GSPFG F +SV+ G
Sbjct: 156 SDPRTDVAVLRIEA--RDLPTLTLGDSESLRVGEWVLAIGSPFG------FDHSVTAGIV 207
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F + VGI
Sbjct: 208 SAKGRNLPSESYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 248
>gi|343500689|ref|ZP_08738579.1| periplasmic serine peptidase DegS [Vibrio tubiashii ATCC 19109]
gi|418477419|ref|ZP_13046552.1| protease DegS [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820051|gb|EGU54882.1| periplasmic serine peptidase DegS [Vibrio tubiashii ATCC 19109]
gi|384575159|gb|EIF05613.1| protease DegS [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 354
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 12/146 (8%)
Query: 231 NIALTPLN-----KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD 285
N+ + PLN K GD++LA+G+P+ L F +S + ++ + D
Sbjct: 138 NLPVIPLNPEYSPKVGDIVLAIGNPYN-LGQTTTFGIIS--ATGRSSISADGHQAFIQTD 194
Query: 286 IRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIATACSDLLLKEPQ 342
G GG + VGI +Q + E I IP+ A+A ++ + +
Sbjct: 195 AAINEGNSGGALVNTRGELVGINTASFQQATELETYGISFAIPY-ALANKIMQKIIADGR 253
Query: 343 NAEKEIHINKGNLNAVGNSLLFNSHI 368
I I+ ++N+V + LL N H+
Sbjct: 254 VIRGYIGIDGQDINSVTSRLLGNEHL 279
>gi|225075404|ref|ZP_03718603.1| hypothetical protein NEIFLAOT_00409 [Neisseria flavescens
NRL30031/H210]
gi|224953222|gb|EEG34431.1| hypothetical protein NEIFLAOT_00409 [Neisseria flavescens
NRL30031/H210]
Length = 412
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + +DLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 80 SDAQSDVALLKIEPQ-EDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 132
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F VGI + + G I IP
Sbjct: 133 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIP 192
Query: 326 WEAIATACSDLL 337
+ +A +D L
Sbjct: 193 ID-VAMNVADQL 203
>gi|241759242|ref|ZP_04757348.1| peptidase Do [Neisseria flavescens SK114]
gi|241320378|gb|EER56675.1| peptidase Do [Neisseria flavescens SK114]
Length = 499
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + +DLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDAQSDVALLKIEPQ-EDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 220 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLRGQVVGI 260
>gi|167888950|gb|ACA09743.1| serine protease, partial [Pseudomonas putida]
Length = 337
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 6 SDVALLKVEA--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 57
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 58 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 94
>gi|398863814|ref|ZP_10619356.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM78]
gi|398246229|gb|EJN31725.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM78]
Length = 475
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 144 SDVALLKVDA--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 195
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 196 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 232
>gi|400288586|ref|ZP_10790618.1| peptidase S1C, Do [Psychrobacter sp. PAMC 21119]
Length = 515
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
K G+ +LA+GSPFG + S + S + R T+ + D+ PG GGP+F
Sbjct: 210 KVGEPVLAIGSPFG----FDYSASAGIVSAKSRSFSRETSVPFIQTDVALNPGNSGGPLF 265
Query: 299 GEHAHFVGI 307
+ +GI
Sbjct: 266 NQRGEVIGI 274
>gi|53804357|ref|YP_114049.1| serine protease MucD [Methylococcus capsulatus str. Bath]
gi|53758118|gb|AAU92409.1| putative serine protease, MucD [Methylococcus capsulatus str. Bath]
Length = 504
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
GD ++A+GSPFG F NSV+ G S + P T + D+ PG GGP+F
Sbjct: 207 GDWVVAIGSPFG------FENSVTAGIISAKSRSLPEETYVPFIQTDVAVNPGNSGGPLF 260
Query: 299 GEHAHFVGI 307
+GI
Sbjct: 261 NLSGEVIGI 269
>gi|220916018|ref|YP_002491322.1| peptidase S1 and S6 chymotrypsin/Hap [Anaeromyxobacter dehalogenans
2CP-1]
gi|219953872|gb|ACL64256.1| peptidase S1 and S6 chymotrypsin/Hap [Anaeromyxobacter dehalogenans
2CP-1]
Length = 301
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR---GDLLLAVGSPFGVLSPMHFFNSVSMGSVA---- 269
VA+L V + +DLP++AL+ +R G+L++A+G+P G F SV++G V+
Sbjct: 79 VAVLRVDA--RDLPSLALS--ERRLSVGELVVAIGNPLG------FERSVTLGVVSALHR 128
Query: 270 NCYPPRSTT-RSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
N PR L+ D PG GGP+ VG+
Sbjct: 129 NLAAPRGAVLEGLVQTDASINPGNSGGPLLDAGGAVVGL 167
>gi|15899338|ref|NP_343943.1| HtrA like serine protease [Sulfolobus solfataricus P2]
gi|284173668|ref|ZP_06387637.1| HtrA like serine protease (periplasmic) [Sulfolobus solfataricus
98/2]
gi|384432948|ref|YP_005642306.1| peptidase S1 and S6 chymotrypsin/Hap [Sulfolobus solfataricus 98/2]
gi|13815918|gb|AAK42733.1| HtrA like serine protease (periplasmic) [Sulfolobus solfataricus
P2]
gi|261601102|gb|ACX90705.1| peptidase S1 and S6 chymotrypsin/Hap [Sulfolobus solfataricus 98/2]
Length = 297
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query: 228 DLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVAN----CYPPRSTTRSLLM 283
+LP++ L K G+++LAVG+P G+ SVSMG +++ P ++
Sbjct: 90 ELPSLKLAKECKTGEVVLAVGNPLGLY-------SVSMGIISSEERAIMTPNGLPIYVVQ 142
Query: 284 ADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLL----LK 339
D PG GGP+ VG + +R+ I IP + + + +++
Sbjct: 143 TDAAVNPGNSGGPLINTRGEVVGTVTAMIREAQ--NIGFAIPSKLVDSFVKNVMKFGRYI 200
Query: 340 EPQNAEKEIHINKGNLNAVG----NSLLFNSHILNGACCYKY 377
P I +NK +G N LL + NG+ YKY
Sbjct: 201 RPYVGIGVIKLNKALATYLGVRKQNGLLVTNIDPNGS-AYKY 241
>gi|440714831|ref|ZP_20895400.1| serine protease [Rhodopirellula baltica SWK14]
gi|436440203|gb|ELP33555.1| serine protease [Rhodopirellula baltica SWK14]
Length = 1518
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 217 VAILGVSSYLK--DLPNIALTPLNKRGDLLLAVGSPFG-VLSPMHFFNSVSM--GSVANC 271
+A+LGV++ K D+ N + +LA G PFG +LS F S+++ GSV++
Sbjct: 353 LAVLGVTNNQKLPDIVNWTNATDVRETSTVLAAGFPFGEILSTNKRFPSITISKGSVSSI 412
Query: 272 YPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
+LL D PG GGPV ++ +G+ + +R + I IP
Sbjct: 413 RRDDFDQIALLQVDGGIHPGNSGGPVLTQNGELIGVAVAKVRNTN---IGFAIP 463
>gi|297205342|ref|ZP_06922738.1| serine protease HtrA [Lactobacillus jensenii JV-V16]
gi|297149920|gb|EFH30217.1| serine protease HtrA [Lactobacillus jensenii JV-V16]
Length = 437
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 213 STSRVAILGV-SSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC 271
STS +A+L + + Y+ + + G ++AVGSP G + +SV+ G ++
Sbjct: 202 STSDLAVLSIDAKYVTQTASFGDSKSLITGQTVIAVGSPMG----SEYASSVTQGIIS-- 255
Query: 272 YPPRSTTRS-----LLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKS-GAEIQ---L 322
P R+ T S ++ D PG GGP+ +GI L Q + G ++
Sbjct: 256 APSRTITTSSNQQTVIQTDAAINPGNSGGPLVNSAGQVIGINSMKLSQSTDGTSVEGMGF 315
Query: 323 VIPWEAIATACSDLL 337
IP + T + L+
Sbjct: 316 AIPSNEVVTIINQLV 330
>gi|388543296|ref|ZP_10146587.1| protease Do [Pseudomonas sp. M47T1]
gi|388278608|gb|EIK98179.1| protease Do [Pseudomonas sp. M47T1]
Length = 478
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
+ VA+L + K+LP + L +K G+ +LA+GSPFG F +SV+ G S
Sbjct: 145 TDVALLKIDG--KNLPTVKLGDSDKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKG 196
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 197 RTLPNDAYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 233
>gi|402548686|ref|ZP_10845539.1| HtrA2 peptidase [SAR86 cluster bacterium SAR86C]
gi|402549098|ref|ZP_10845951.1| HtrA2 peptidase [SAR86 cluster bacterium SAR86C]
Length = 330
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 226 LKDLPNIALTPLN-------KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYPPRST 277
LK LP L P+ K GD +LA+G+P+G+ SVS G V A +
Sbjct: 113 LKVLPEDLLVPIKIADSSNIKIGDKVLAIGNPYGIGI------SVSSGIVSATGRDYGNP 166
Query: 278 TRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE--IQLVIPWEAIATACSD 335
L+ D PG GG + E + +GI + + K+GA + IP AIA S+
Sbjct: 167 YLELIQTDAAINPGNSGGALINEKGNLIGINTK-IFSKTGAYQGLGFAIPSNAIAEITSE 225
Query: 336 LL 337
++
Sbjct: 226 II 227
>gi|442324191|ref|YP_007364212.1| S1C family peptidase [Myxococcus stipitatus DSM 14675]
gi|441491833|gb|AGC48528.1| S1C family peptidase [Myxococcus stipitatus DSM 14675]
Length = 501
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 36/149 (24%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
VA+L + +K LP + L + + GD ++A+G+PFG+ S SVS+G V+
Sbjct: 168 VAVLKLQGDVKGLPVVRLGDSDAMRVGDWVVAIGNPFGLAS------SVSLGIVS----- 216
Query: 275 RSTTRSL--------LMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPW 326
+ R + L D PG GGP+F H VGI Q SG
Sbjct: 217 -AKARDIQAGPFDDFLQTDAAINPGNSGGPLFNLHGEVVGINTAIAGQGSG--------- 266
Query: 327 EAIATACSDLLLKE--PQNAEKEIHINKG 353
I A L+KE PQ EK+ + +G
Sbjct: 267 --IGFAVPSSLVKELLPQ-LEKQGSVTRG 292
>gi|83647966|ref|YP_436401.1| trypsin-like serine protease [Hahella chejuensis KCTC 2396]
gi|83636009|gb|ABC31976.1| Trypsin-like serine protease, typically periplasmic, contain
C-terminal PDZ domain [Hahella chejuensis KCTC 2396]
Length = 362
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR---STTRSLLMADIRCLPGMEGG 295
+ GD++LA+G+PFGV +V+ G ++ +T + + D+ PG GG
Sbjct: 158 RVGDIVLAIGNPFGV------GQAVTQGIISGLGRSNLGLATYENYIQTDVAINPGNSGG 211
Query: 296 PVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLL 338
+ VGI+ G + I IP ++ DL+L
Sbjct: 212 ALINAKGELVGIVTAVFSTTGGYQGISFAIPAQSAMAIAQDLIL 255
>gi|59800596|ref|YP_207308.1| serine protease [Neisseria gonorrhoeae FA 1090]
gi|194097768|ref|YP_002000809.1| putative serine protease [Neisseria gonorrhoeae NCCP11945]
gi|240013454|ref|ZP_04720367.1| putative serine protease [Neisseria gonorrhoeae DGI18]
gi|240015893|ref|ZP_04722433.1| putative serine protease [Neisseria gonorrhoeae FA6140]
gi|240120525|ref|ZP_04733487.1| putative serine protease [Neisseria gonorrhoeae PID24-1]
gi|254493048|ref|ZP_05106219.1| periplasmic serine protease [Neisseria gonorrhoeae 1291]
gi|268594125|ref|ZP_06128292.1| periplasmic serine protease [Neisseria gonorrhoeae 35/02]
gi|268596177|ref|ZP_06130344.1| periplasmic serine protease [Neisseria gonorrhoeae FA19]
gi|268598301|ref|ZP_06132468.1| periplasmic serine protease [Neisseria gonorrhoeae MS11]
gi|268600654|ref|ZP_06134821.1| periplasmic serine protease [Neisseria gonorrhoeae PID18]
gi|268602966|ref|ZP_06137133.1| periplasmic serine protease [Neisseria gonorrhoeae PID1]
gi|268681438|ref|ZP_06148300.1| periplasmic serine protease [Neisseria gonorrhoeae PID332]
gi|268683605|ref|ZP_06150467.1| periplasmic serine protease [Neisseria gonorrhoeae SK-92-679]
gi|268685908|ref|ZP_06152770.1| periplasmic serine protease [Neisseria gonorrhoeae SK-93-1035]
gi|291044533|ref|ZP_06570242.1| periplasmic serine protease [Neisseria gonorrhoeae DGI2]
gi|293397667|ref|ZP_06641873.1| serine protease [Neisseria gonorrhoeae F62]
gi|385335008|ref|YP_005888955.1| putative serine protease [Neisseria gonorrhoeae TCDC-NG08107]
gi|59717491|gb|AAW88896.1| putative serine protease [Neisseria gonorrhoeae FA 1090]
gi|193933058|gb|ACF28882.1| putative serine protease [Neisseria gonorrhoeae NCCP11945]
gi|226512088|gb|EEH61433.1| periplasmic serine protease [Neisseria gonorrhoeae 1291]
gi|268547514|gb|EEZ42932.1| periplasmic serine protease [Neisseria gonorrhoeae 35/02]
gi|268549965|gb|EEZ44984.1| periplasmic serine protease [Neisseria gonorrhoeae FA19]
gi|268582432|gb|EEZ47108.1| periplasmic serine protease [Neisseria gonorrhoeae MS11]
gi|268584785|gb|EEZ49461.1| periplasmic serine protease [Neisseria gonorrhoeae PID18]
gi|268587097|gb|EEZ51773.1| periplasmic serine protease [Neisseria gonorrhoeae PID1]
gi|268621722|gb|EEZ54122.1| periplasmic serine protease [Neisseria gonorrhoeae PID332]
gi|268623889|gb|EEZ56289.1| periplasmic serine protease [Neisseria gonorrhoeae SK-92-679]
gi|268626192|gb|EEZ58592.1| periplasmic serine protease [Neisseria gonorrhoeae SK-93-1035]
gi|291011427|gb|EFE03423.1| periplasmic serine protease [Neisseria gonorrhoeae DGI2]
gi|291611613|gb|EFF40682.1| serine protease [Neisseria gonorrhoeae F62]
gi|317163551|gb|ADV07092.1| putative serine protease [Neisseria gonorrhoeae TCDC-NG08107]
Length = 499
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + ++LP + + P N K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TEELPVVKIGNPKNLKPGEWVAAIGAPFG------FDNSVTAGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 260
>gi|294669857|ref|ZP_06734916.1| hypothetical protein NEIELOOT_01750 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308250|gb|EFE49493.1| hypothetical protein NEIELOOT_01750 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 443
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + + + LP + + + + G+ + A+G+PFG F NS++ G
Sbjct: 111 SDTQSDVALLKIEA--EGLPTVKIGDVKTLRIGEWVAAIGAPFG------FENSITAGIV 162
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + D+ PG GGP+F + VGI + + G I IP
Sbjct: 163 SAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLNGQVVGINSQIYSRSGGFMGISFAIP 222
Query: 326 WEAIATACSDLL 337
+ +A +D L
Sbjct: 223 ID-VAMNVADQL 233
>gi|146306503|ref|YP_001186968.1| protease Do [Pseudomonas mendocina ymp]
gi|421504669|ref|ZP_15951610.1| protease Do [Pseudomonas mendocina DLHK]
gi|363579857|sp|A4XSC0.1|DEGPL_PSEMY RecName: Full=Probable periplasmic serine endoprotease DegP-like;
AltName: Full=Protease Do; Flags: Precursor
gi|145574704|gb|ABP84236.1| protease Do [Pseudomonas mendocina ymp]
gi|400344627|gb|EJO92996.1| protease Do [Pseudomonas mendocina DLHK]
Length = 474
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V K LP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 142 SDVALLKVEG--KGLPTVRLGKSDELKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 193
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 194 RNLPSDSYVPFIQTDVAINPGNSGGPLFNLKGEVVGI 230
>gi|256851724|ref|ZP_05557112.1| periplasmic serine peptidase DegS [Lactobacillus jensenii 27-2-CHN]
gi|260661558|ref|ZP_05862470.1| periplasmic serine peptidase DegS [Lactobacillus jensenii
115-3-CHN]
gi|256615682|gb|EEU20871.1| periplasmic serine peptidase DegS [Lactobacillus jensenii 27-2-CHN]
gi|260547615|gb|EEX23593.1| periplasmic serine peptidase DegS [Lactobacillus jensenii
115-3-CHN]
Length = 426
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 213 STSRVAILGV-SSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC 271
STS +A+L + + Y+ + + G ++AVGSP G + +SV+ G ++
Sbjct: 191 STSDLAVLSIDAKYVTQTASFGDSKSLITGQTVIAVGSPMG----SEYASSVTQGIIS-- 244
Query: 272 YPPRSTTRS-----LLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKS-GAEIQ---L 322
P R+ T S ++ D PG GGP+ +GI L Q + G ++
Sbjct: 245 APSRTITTSSNQQTVIQTDAAINPGNSGGPLVNSAGQVIGINSMKLSQSTDGTSVEGMGF 304
Query: 323 VIPWEAIATACSDLL 337
IP + T + L+
Sbjct: 305 AIPSNEVVTIINQLV 319
>gi|430375744|ref|ZP_19430147.1| serine protease [Moraxella macacae 0408225]
gi|429540975|gb|ELA09003.1| serine protease [Moraxella macacae 0408225]
Length = 476
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
K G+ +LA+GSPFG + S + S + + T+ S + D+ PG GGP+F
Sbjct: 172 KVGEPVLAIGSPFG----FDYSASAGIVSAKSRNFAKDTSVSFIQTDVALNPGNSGGPLF 227
Query: 299 GEHAHFVGI 307
+ VG+
Sbjct: 228 NQKGEVVGV 236
>gi|220930913|ref|YP_002507821.1| 2-alkenal reductase [Halothermothrix orenii H 168]
gi|219992223|gb|ACL68826.1| 2-alkenal reductase [Halothermothrix orenii H 168]
Length = 400
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 227 KDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRS-------- 276
+DL I L +K GD ++A+G+PFG F ++V++G V+ P
Sbjct: 181 RDLTPIKLGDSDKIRPGDWVIAIGNPFG------FEHTVTIGVVSALGRPIQIPTQDGQV 234
Query: 277 -TTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSD 335
T R+L+ D PG GGP+ +GI Q G I IP + +D
Sbjct: 235 RTYRNLIQTDAAINPGNSGGPLLNIDGEVIGINTAVSAQGQG--IGFAIPANEVKEIVND 292
Query: 336 LLLK 339
L K
Sbjct: 293 LKTK 296
>gi|297250798|ref|ZP_06934281.1| biotin synthase [Neisseria polysaccharea ATCC 43768]
gi|296838050|gb|EFH21988.1| biotin synthase [Neisseria polysaccharea ATCC 43768]
Length = 302
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + ++LP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TEELPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIP 325
S P + + D+ PG GGP+F VGI + + G I IP
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIP 279
Query: 326 WEAIATACSDLLLKEPQNAE 345
+ L NA+
Sbjct: 280 IDVAMNVAEQLKTPAKSNAD 299
>gi|431931178|ref|YP_007244224.1| periplasmic serine protease, Do/DeqQ family [Thioflavicoccus
mobilis 8321]
gi|431829481|gb|AGA90594.1| periplasmic serine protease, Do/DeqQ family [Thioflavicoccus
mobilis 8321]
Length = 476
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S +A+L + KDLP L N K G+ +LA+GSPFG F +S++ G
Sbjct: 137 SDKRSDIALLKIDG--KDLPVTKLGSANDLKVGEWVLAIGSPFG------FEHSMTAGIV 188
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VG+
Sbjct: 189 SAKGRNLPSENYVPFIQTDVAINPGNSGGPLFNLDGEVVGV 229
>gi|387127240|ref|YP_006295845.1| Serine protease precursor MucD/AlgY [Methylophaga sp. JAM1]
gi|386274302|gb|AFI84200.1| Serine protease precursor MucD/AlgY [Methylophaga sp. JAM1]
Length = 475
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L S S VA+L V + +L + L N K G+ +LA+GSPFG + + +
Sbjct: 135 LGSDERSDVALLKVDAKGMNLKAVKLGDSNDLKVGEWVLAIGSPFG----FDYSATAGIV 190
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 191 SALGRSLPSDSYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 231
>gi|197121314|ref|YP_002133265.1| peptidase S1 and S6 chymotrypsin/Hap [Anaeromyxobacter sp. K]
gi|196171163|gb|ACG72136.1| peptidase S1 and S6 chymotrypsin/Hap [Anaeromyxobacter sp. K]
Length = 301
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 18/99 (18%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR---GDLLLAVGSPFGVLSPMHFFNSVSMGSVA---- 269
VA+L V + +DLP++AL+ +R G+L++A+G+P G F SV++G V+
Sbjct: 79 VAVLRVDA--RDLPSLALS--ERRLSVGELVVAIGNPLG------FERSVTLGVVSALHR 128
Query: 270 NCYPPRSTT-RSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
N PR L+ D PG GGP+ VG+
Sbjct: 129 NLAAPRGAVLEGLVQTDASINPGNSGGPLLDAGGAVVGL 167
>gi|145594076|ref|YP_001158373.1| peptidase S1 and S6, chymotrypsin/Hap [Salinispora tropica CNB-440]
gi|145303413|gb|ABP53995.1| peptidase S1 and S6, chymotrypsin/Hap [Salinispora tropica CNB-440]
Length = 378
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
K G ++ VG+P G+ +SV+ G V+ + + S + D PG GGPV
Sbjct: 289 KSGQQIVVVGAPLGLE------DSVTTGVVSAFRESKGSDPSAIQFDAPINPGNSGGPVI 342
Query: 299 GEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATAC 333
VGI R G I L +P IATAC
Sbjct: 343 NGERQVVGIATAKARDAEG--IGLAVP---IATAC 372
>gi|350553292|ref|ZP_08922472.1| protease Do [Thiorhodospira sibirica ATCC 700588]
gi|349791167|gb|EGZ45057.1| protease Do [Thiorhodospira sibirica ATCC 700588]
Length = 476
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
K G+ +LA+GSPFG F +SV+ G S PR + D+ PG GGP
Sbjct: 167 KVGEWVLAIGSPFG------FDHSVTAGIVSAKGRSLPRENYVPFIQTDVAINPGNSGGP 220
Query: 297 VFGEHAHFVGI 307
+F VGI
Sbjct: 221 LFNMQGEVVGI 231
>gi|91789490|ref|YP_550442.1| peptidase S1C, Do [Polaromonas sp. JS666]
gi|91698715|gb|ABE45544.1| Peptidase S1C, Do [Polaromonas sp. JS666]
Length = 487
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA++ + + LP + + +N K G+ ++A+GSPFG N+V+ G V+
Sbjct: 156 SDVAVVKIEA--SGLPAVKIGDINRLKVGEWVMAIGSPFG------LENTVTAGIVSAKQ 207
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIAT 331
S + D+ PG GGP+ VGI + + G + I IP + AT
Sbjct: 208 RDTGDYLSFIQTDVAINPGNSGGPLINMRGEVVGINSQIYSRSGGFQGISFSIPIDE-AT 266
Query: 332 ACSDLL 337
SD L
Sbjct: 267 RVSDQL 272
>gi|456063756|ref|YP_007502726.1| Protease Do [beta proteobacterium CB]
gi|455441053|gb|AGG33991.1| Protease Do [beta proteobacterium CB]
Length = 482
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 24/137 (17%)
Query: 185 IESNKISLMESHRPFAMEESSN---LSLMSKSTSRVAILGVSSYL---------KDLPNI 232
IESN + L +H + E +N ++L K + +LG+ +DLP +
Sbjct: 113 IESNGLILTNAH----VVEGANTIYVTLTDKREYKAKLLGMDKRTDVAVVKIDARDLPKL 168
Query: 233 AL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLP 290
L + + G+ +LA+GSPFG N+V+ G V+ + D+ P
Sbjct: 169 PLGDSSRVRVGEWVLAIGSPFG------LENTVTAGIVSAKSRDTGDYLPFIQTDVAVNP 222
Query: 291 GMEGGPVFGEHAHFVGI 307
G GGP+ +GI
Sbjct: 223 GNSGGPLLNTAGQVIGI 239
>gi|452973291|gb|EME73113.1| serine protease HtrB [Bacillus sonorensis L12]
Length = 456
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 23/140 (16%)
Query: 207 LSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + SK +VA G SS L+ G+ ++A+G+P G + F +V+ G
Sbjct: 223 LQIKSKGVEKVAGFGDSSKLR------------AGEKVIAIGNPLG----LQFSRTVTEG 266
Query: 267 SVA--NCYPPRSTTR-----SLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE 319
++ N ST+ ++L D PG GGP+ +GI + Q
Sbjct: 267 IISGVNRTIEVSTSEGKWDMNVLQTDAAINPGNSGGPLINSSGQVIGINSLKISQSGVES 326
Query: 320 IQLVIPWEAIATACSDLLLK 339
+ IP + +LL K
Sbjct: 327 LGFAIPSNDVQPIVDELLQK 346
>gi|195953538|ref|YP_002121828.1| protease Do [Hydrogenobaculum sp. Y04AAS1]
gi|195933150|gb|ACG57850.1| protease Do [Hydrogenobaculum sp. Y04AAS1]
Length = 464
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 43/218 (19%)
Query: 115 EKEHED-VDKGSPEWVTAQLMMLVDIPVSSLALQS----LMEA--SSGLPEHEWEVGWSL 167
+KE E VDK SP VT +V P+++ +M + +PE E ++G +
Sbjct: 31 QKEVEQIVDKVSPSVVTIYATQIVKAPLNTQIFPGFPPFMMPGIPTPEIPEKEKDLGSGI 90
Query: 168 A-PYNNSSQPLMGVVKTSIESNKISLM--------ESHRPFAMEESSNLSLMSKS----- 213
Y S + + + N +M + + ++L+++ S
Sbjct: 91 IIKYIQSKNAFIILTNNHVVGNSKDVMVKLSRTIERKAKVLGRDPKTDLAVLEVSAEGID 150
Query: 214 --TSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA-- 269
+SRVA LG SS+++ G L++A+G+P+G F +V+MG ++
Sbjct: 151 NPSSRVATLGDSSHVR------------IGQLVIAIGNPYG------FSRTVTMGVISAL 192
Query: 270 NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
N S + D PG GGP+ +GI
Sbjct: 193 NRRLGLSQYEDYIQTDAAINPGNSGGPLINIEGKVIGI 230
>gi|421745610|ref|ZP_16183457.1| trypsin-like serine protease [Cupriavidus necator HPC(L)]
gi|409775889|gb|EKN57331.1| trypsin-like serine protease [Cupriavidus necator HPC(L)]
Length = 396
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +A+L ++ L DLP I L L K GD++LA+G+PFGV +V+MG V
Sbjct: 156 SDPETDLAVLKIT--LTDLPAITLGRLENVKVGDVVLAIGNPFGV------GQTVTMGIV 207
Query: 269 A---NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ + +T + + D PG GG + + +GI
Sbjct: 208 SALGRSHLGINTFENFIQTDAAINPGNSGGALVDAQGNLLGI 249
>gi|227828927|ref|YP_002830707.1| 2-alkenal reductase [Sulfolobus islandicus M.14.25]
gi|229586134|ref|YP_002844636.1| 2-alkenal reductase [Sulfolobus islandicus M.16.27]
gi|227460723|gb|ACP39409.1| 2-alkenal reductase [Sulfolobus islandicus M.14.25]
gi|228021184|gb|ACP56591.1| 2-alkenal reductase [Sulfolobus islandicus M.16.27]
Length = 297
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 228 DLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVAN----CYPPRSTTRSLLM 283
+LP++ K G+++LAVG+P G+ SVSMG +++ P ++
Sbjct: 90 NLPSLKFAKEYKTGEVVLAVGNPLGLY-------SVSMGIISSEERAIMTPNGLPIYVIQ 142
Query: 284 ADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLL 337
D PG GGP+ VG + +R+ I IP + I + +++
Sbjct: 143 TDAAVNPGNSGGPLINTKGEVVGTVTAMIRE--AQNIGFAIPSKLIDSFVKNVM 194
>gi|350269736|ref|YP_004881044.1| serine protease [Oscillibacter valericigenes Sjm18-20]
gi|348594578|dbj|BAK98538.1| serine protease [Oscillibacter valericigenes Sjm18-20]
Length = 474
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGE 300
GD +LAVG+P G L+ VS SV T +++ D PG GGP+F E
Sbjct: 212 GDHVLAVGNPLGELTFSMSGGMVS--SVNRAINVDGTPFNMIQTDTSINPGNSGGPLFNE 269
Query: 301 HAHFVGI 307
+ VGI
Sbjct: 270 YGEVVGI 276
>gi|384082332|ref|ZP_09993507.1| protease Do [gamma proteobacterium HIMB30]
Length = 457
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC- 271
S VA+L + + DLP IA + KRG ++A+GSPFG F SV+ G V+
Sbjct: 130 SDVAVLKLDA--TDLPVAKIADSDDVKRGQWVVAIGSPFG------FDYSVTAGIVSATG 181
Query: 272 -YPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 182 RALPDESYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 218
>gi|372488271|ref|YP_005027836.1| periplasmic serine protease, Do/DeqQ family [Dechlorosoma suillum
PS]
gi|359354824|gb|AEV25995.1| periplasmic serine protease, Do/DeqQ family [Dechlorosoma suillum
PS]
Length = 497
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA++ +++ +LP + + + K G+ + A+G+PFG F NSV+ G S +
Sbjct: 175 SDVALIKIAA--SNLPTVRIGSPDRLKVGEWVAAIGAPFG------FENSVTAGIVSAKS 226
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P T + D+ PG GGP+F VGI + + G + I IP + +
Sbjct: 227 RALPDETYVPFIQTDVAINPGNSGGPLFNLKGEVVGINSQIYSRSGGYQGISFAIPID-V 285
Query: 330 ATACSDLLLK 339
A D L K
Sbjct: 286 AMKVKDQLQK 295
>gi|329906621|ref|ZP_08274467.1| HtrA protease/chaperone protein [Oxalobacteraceae bacterium
IMCC9480]
gi|327547207|gb|EGF32065.1| HtrA protease/chaperone protein [Oxalobacteraceae bacterium
IMCC9480]
Length = 494
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 38/227 (16%)
Query: 228 DLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMAD 285
+LP +A+ NK G+ ++A+GSPFG N+V+ G V+ L+ D
Sbjct: 176 NLPRLAMGDSNKVRVGEWVIAIGSPFG------LDNTVTAGIVSAKARDTGDYLPLIQTD 229
Query: 286 IRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIATACSDLLLKEPQNA 344
+ PG GGP+ +GI + + G I +P + A SD L + +
Sbjct: 230 VAVNPGNSGGPLINMRGEVIGINSQIYSRSGGYMGISFAVPIDE-AMRVSDQLKQFGKVT 288
Query: 345 EKEIHINKGNLNA-VGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITID 403
I + G L V SL GA + E + P +KA
Sbjct: 289 RGRIGVQIGELTKDVAESLGLTKA--QGALVQRVE-------TGGPAEKA---------- 329
Query: 404 DGVWASGVLLNDQGLILTNAHLLEPWRFGKT------TVSGWRNGVS 444
GV A ++L G+ + + L P G T +S WR G S
Sbjct: 330 -GVEAGDIILKFNGVNIDRSSDL-PRLVGNTKPGSSSVLSVWRKGAS 374
>gi|34498749|ref|NP_902964.1| serine protease [Chromobacterium violaceum ATCC 12472]
gi|34332874|gb|AAQ60958.2| periplasmic serine protease [Chromobacterium violaceum ATCC 12472]
Length = 488
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 215 SRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V++ DLP + P + K G+ + A+G+PFG F N+V+ G S
Sbjct: 159 SDVALLKVAA--ADLPVAKIGNPADLKVGEWVAAIGAPFG------FDNTVTAGIVSAKG 210
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWEAI 329
P T + D+ PG GGP+F VGI + + G I IP + +
Sbjct: 211 RSLPDETLVPFIQTDVAINPGNSGGPLFNLRGEVVGINSQIYSRSGGFMGISFAIPID-L 269
Query: 330 ATACSDLLLKEPQNAEKEIHIN 351
A +D L + + + ++ +N
Sbjct: 270 AMQVADQLKTKGKVSRGQLGVN 291
>gi|227831665|ref|YP_002833445.1| 2-alkenal reductase [Sulfolobus islandicus L.S.2.15]
gi|229580621|ref|YP_002839021.1| 2-alkenal reductase [Sulfolobus islandicus Y.G.57.14]
gi|229583473|ref|YP_002841872.1| 2-alkenal reductase [Sulfolobus islandicus Y.N.15.51]
gi|238621119|ref|YP_002915945.1| 2-alkenal reductase [Sulfolobus islandicus M.16.4]
gi|284999219|ref|YP_003420987.1| peptidase S1 or S6, chymotrypsin/Hap [Sulfolobus islandicus
L.D.8.5]
gi|385774639|ref|YP_005647208.1| 2-alkenal reductase [Sulfolobus islandicus HVE10/4]
gi|385777284|ref|YP_005649852.1| 2-alkenal reductase [Sulfolobus islandicus REY15A]
gi|227458113|gb|ACP36800.1| 2-alkenal reductase [Sulfolobus islandicus L.S.2.15]
gi|228011337|gb|ACP47099.1| 2-alkenal reductase [Sulfolobus islandicus Y.G.57.14]
gi|228014189|gb|ACP49950.1| 2-alkenal reductase [Sulfolobus islandicus Y.N.15.51]
gi|238382189|gb|ACR43277.1| 2-alkenal reductase [Sulfolobus islandicus M.16.4]
gi|284447115|gb|ADB88617.1| peptidase S1 or S6, chymotrypsin/Hap [Sulfolobus islandicus
L.D.8.5]
gi|323476032|gb|ADX86638.1| 2-alkenal reductase [Sulfolobus islandicus REY15A]
gi|323478756|gb|ADX83994.1| 2-alkenal reductase [Sulfolobus islandicus HVE10/4]
Length = 297
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 228 DLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVAN----CYPPRSTTRSLLM 283
+LP++ K G+++LAVG+P G+ SVSMG +++ P ++
Sbjct: 90 NLPSLKFAKEYKTGEVVLAVGNPLGLY-------SVSMGIISSEERAIMTPNGLPIYVIQ 142
Query: 284 ADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDLL 337
D PG GGP+ VG + +R+ I IP + I + +++
Sbjct: 143 TDAAVNPGNSGGPLINTKGEVVGTVTAMIRE--AQNIGFAIPSKLIDSFVKNVM 194
>gi|218668070|ref|YP_002425828.1| serine protease, DO/DeqQ family [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|218520283|gb|ACK80869.1| serine protease, DO/DeqQ family [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 479
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA+L + + K+LP + + +K G +LAVGSPFG F NSV+ G + A P
Sbjct: 147 VALLKIDA--KNLPVVQIGDSSKLEVGQWVLAVGSPFG------FENSVTQGVISATSRP 198
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F +GI
Sbjct: 199 LPDDPYIPFVQTDVPINPGNSGGPLFNMRGQVIGI 233
>gi|347539386|ref|YP_004846811.1| protease Do [Pseudogulbenkiania sp. NH8B]
gi|345642564|dbj|BAK76397.1| protease Do [Pseudogulbenkiania sp. NH8B]
Length = 473
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SV 268
S + + VA+L +++ + +I + K G+ +LA+GSPFG F NSV+ G S
Sbjct: 130 SDARTDVALLKINASHLPVAHIGSSANLKVGEWVLAIGSPFG------FENSVTSGIVSA 183
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWE 327
P + D PG GGP+F VGI + + G I IP +
Sbjct: 184 KGRSLPDENYVPFIQTDAAVNPGNSGGPLFNLKGEVVGINSQIYSRSGGFMGISFAIPID 243
Query: 328 AIATACSDLLLKEPQNAEKEIHI 350
+A +D L E + + I +
Sbjct: 244 -VAVKVADQLKSEGKVSRGRIGV 265
>gi|374296228|ref|YP_005046419.1| trypsin-like serine protease with C-terminal PDZ domain
[Clostridium clariflavum DSM 19732]
gi|359825722|gb|AEV68495.1| trypsin-like serine protease with C-terminal PDZ domain
[Clostridium clariflavum DSM 19732]
Length = 276
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 397 VCLITIDDGVWASGVLLNDQGLILTNAHLLE 427
VC+I GV SGVL+ND+G ILTN H++
Sbjct: 97 VCMILTSSGVQGSGVLINDEGYILTNYHVVN 127
>gi|119899963|ref|YP_935176.1| serine protease MucD [Azoarcus sp. BH72]
gi|119672376|emb|CAL96290.1| probable serine protease MucD [Azoarcus sp. BH72]
Length = 477
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 185 IESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSS---------YLKDLPNIALT 235
+ ++ I L +H E + + L K + +LGV K+LP + L
Sbjct: 114 VSADGIVLTNAHVVDGASEVT-VKLTDKREFKAKVLGVDKPTDVAVLRIDAKNLPTVPLG 172
Query: 236 PLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPG 291
K GD +LA+G+PFG F NSV+ G S + P + D+ PG
Sbjct: 173 DPQKAHVGDWVLAIGAPFG------FENSVTAGIISAKSRSLPNEGYVPFIQTDVAINPG 226
Query: 292 MEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLKEPQNAEKEIHI 350
GGP+ VGI + + G + + IP + +A D ++ + I +
Sbjct: 227 NSGGPLLNLAGEVVGINSQIYSRSGGYQGLSFAIPID-VAAGVRDQIVAHGKVTRGRIGV 285
Query: 351 NKGNLN 356
++N
Sbjct: 286 AVQDVN 291
>gi|71907529|ref|YP_285116.1| peptidase S1C, Do [Dechloromonas aromatica RCB]
gi|71847150|gb|AAZ46646.1| Peptidase S1C, Do [Dechloromonas aromatica RCB]
Length = 489
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + K+LP + + + G+ +LA+GSPFG F +S S G S +
Sbjct: 166 SDVAVLRIDA--KNLPTVKIGSSTQTAVGEWVLAIGSPFG------FESSASAGIVSAKS 217
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
P + + D+ PG GGP+F + +GI + + G + + IP E
Sbjct: 218 RNLPDGSYVPFIQTDVAVNPGNSGGPLFNMNGEVIGINSQIYSRSGGYQGLSFAIPIE 275
>gi|337280530|ref|YP_004620002.1| serine protease do-like [Ramlibacter tataouinensis TTB310]
gi|334731607|gb|AEG93983.1| serine protease do-like precursor-like protein [Ramlibacter
tataouinensis TTB310]
Length = 477
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSL--------LMADIRCLP 290
K G+ +LA+GSPFG F N+V++G V+ + RSL + D+ P
Sbjct: 179 KTGEWVLAIGSPFG------FENTVTVGVVS------AIGRSLRGDSAVPFIQTDVAVNP 226
Query: 291 GMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLK 339
G GGP+F VGI + + G + + IP ++A+ D +++
Sbjct: 227 GNSGGPLFNARGEVVGINSQIYSRTGGYQGVSFAIPM-SLASKVQDQIVR 275
>gi|261378234|ref|ZP_05982807.1| S1C subfamily peptidase MucD [Neisseria cinerea ATCC 14685]
gi|269145311|gb|EEZ71729.1| S1C subfamily peptidase MucD [Neisseria cinerea ATCC 14685]
Length = 499
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + +DLP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TEDLPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 260
>gi|407695368|ref|YP_006820156.1| protease Do subfamily [Alcanivorax dieselolei B5]
gi|407252706|gb|AFT69813.1| Protease Do subfamily [Alcanivorax dieselolei B5]
Length = 489
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S +A+L V + DLP NI + K G+ +LA+G+PFG F +SV+ G
Sbjct: 155 ADEQSDLALLKVEA--SDLPVVNIGSSENLKVGEWVLAIGAPFG------FDSSVTAGIV 206
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F + VGI
Sbjct: 207 SAKGRSLPSDNYVPFIQTDVAINPGNSGGPLFNLNGEVVGI 247
>gi|411001047|gb|AFV98776.1| serine protease precursor MucD [Candidatus Snodgrassella sp.
TA1_30860]
Length = 507
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ + S VA+L +S+ +LP + L P K G+ + A+G+PFG F NSV+ G
Sbjct: 180 ADAQSDVALLKISA--NELPVVELGNPEELKVGEWVAAIGAPFG------FDNSVTAGIV 231
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 232 SAKGRSLPEENYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 272
>gi|384083899|ref|ZP_09995074.1| protease Do [Acidithiobacillus thiooxidans ATCC 19377]
Length = 479
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA+L + + +LP + + K G +LAVGSPFG F NSV+ G V A P
Sbjct: 146 VALLKIDA--NNLPTVQIGDSGKLEVGQWVLAVGSPFG------FENSVTQGVVSATARP 197
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F +GI
Sbjct: 198 LPDDPYIPFIQTDVPINPGNSGGPLFNMRGQVIGI 232
>gi|224825218|ref|ZP_03698324.1| protease Do [Pseudogulbenkiania ferrooxidans 2002]
gi|224602889|gb|EEG09066.1| protease Do [Pseudogulbenkiania ferrooxidans 2002]
Length = 473
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 10/143 (6%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SV 268
S + + VA+L +++ + +I + K G+ +LA+GSPFG F NSV+ G S
Sbjct: 130 SDARTDVALLKINASHLPVAHIGSSANLKVGEWVLAIGSPFG------FENSVTSGIVSA 183
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWE 327
P + D PG GGP+F VGI + + G I IP +
Sbjct: 184 KGRSLPDENYVPFIQTDAAVNPGNSGGPLFNLKGEVVGINSQIYSRSGGFMGISFAIPID 243
Query: 328 AIATACSDLLLKEPQNAEKEIHI 350
+A +D L E + + I +
Sbjct: 244 -VAVKVADQLKSEGKVSRGRIGV 265
>gi|198283245|ref|YP_002219566.1| protease Do [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198247766|gb|ACH83359.1| protease Do [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 491
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYP 273
VA+L + + K+LP + + +K G +LAVGSPFG F NSV+ G + A P
Sbjct: 159 VALLKIDA--KNLPVVQIGDSSKLEVGQWVLAVGSPFG------FENSVTQGVISATSRP 210
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F +GI
Sbjct: 211 LPDDPYIPFVQTDVPINPGNSGGPLFNMRGQVIGI 245
>gi|347756215|ref|YP_004863778.1| periplasmic serine protease, Do/DeqQ family [Candidatus
Chloracidobacterium thermophilum B]
gi|347588732|gb|AEP13261.1| periplasmic serine protease, Do/DeqQ family [Candidatus
Chloracidobacterium thermophilum B]
Length = 503
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSL------LMADIRCLPGM 292
++GD ++A+G+PFG+ + +V + S P S T L D PG
Sbjct: 183 EQGDWVMAIGAPFGLEQTL----TVGVISATGRNLPSSRTNRFAQYNNYLQTDASINPGN 238
Query: 293 EGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLK 339
GGP+ +G+ L + G+E I IP + + C L+L+
Sbjct: 239 SGGPLLNLRGEVIGVNTMILSESGGSEGIGFAIPSDLVERICRKLILE 286
>gi|372270757|ref|ZP_09506805.1| peptidase S1 and S6, chymotrypsin/Hap [Marinobacterium stanieri
S30]
Length = 380
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 226 LKDLPNIALTPLNKR-GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR---STTRSL 281
L++LP+I + R GD+ LA+G+PFGV +V+MG ++ + ST
Sbjct: 163 LEELPSITFASDDLRIGDVALAIGNPFGV------GQTVTMGIISATGRNQLGLSTYEDF 216
Query: 282 LMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLL 337
+ D PG GG + + + +GI + G++ I IP DL+
Sbjct: 217 IQTDAAINPGNSGGALVDAYGNLIGINTAIFSKSGGSQGIGFAIPSSLARQVMQDLI 273
>gi|339481735|ref|YP_004693521.1| peptidase S1 and S6 chymotrypsin/Hap [Nitrosomonas sp. Is79A3]
gi|338803880|gb|AEJ00122.1| peptidase S1 and S6 chymotrypsin/Hap [Nitrosomonas sp. Is79A3]
Length = 380
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 226 LKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR---STTRS 280
LK+LP I + K GD++LAVG+PFGV SV+MG V+ R +T
Sbjct: 163 LKELPAITFGQSQQVKVGDVVLAVGNPFGV------GQSVTMGIVSAMSRSRVGINTFED 216
Query: 281 LLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ D PG GG + + +GI
Sbjct: 217 FIQIDAAINPGNSGGALTDTSGNLIGI 243
>gi|374367588|ref|ZP_09625649.1| serine protease [Cupriavidus basilensis OR16]
gi|373100891|gb|EHP41951.1| serine protease [Cupriavidus basilensis OR16]
Length = 431
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
G LA+GSP+G F NSVS G S P + L D+ PG GGP+F
Sbjct: 127 GSWALAIGSPYG------FANSVSAGIVSAKGRVLPGAEYMPFLQTDVPVNPGNSGGPLF 180
Query: 299 GEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLLLKEPQNAEKEIHIN 351
+GI R + G + + IP + +A D LL + I +
Sbjct: 181 NLKGEVIGINSRIYSRSGGYQGLSFAIPID-VAMRIKDQLLSQGAVTRARIGVT 233
>gi|302382655|ref|YP_003818478.1| protease Do [Brevundimonas subvibrioides ATCC 15264]
gi|302193283|gb|ADL00855.1| protease Do [Brevundimonas subvibrioides ATCC 15264]
Length = 465
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 192 LMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGS 249
++ R F E +++ S +A+L ++ + LP +A+ ++ GDL+LA+G+
Sbjct: 121 VLNDRREFPAE-----VILADERSDIAVLRLTGVTEQLPVLAIDDREEQQVGDLVLAIGN 175
Query: 250 PFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
PFGV + N + + ++ S + S + D PG GGP+ +GI
Sbjct: 176 PFGVGQTVT--NGI-ISALNRTETGISDSGSFIQTDAAINPGNSGGPLVDMDGDVIGI 230
>gi|345874512|ref|ZP_08826323.1| S1C subfamily peptidase MucD [Neisseria weaveri LMG 5135]
gi|343970423|gb|EGV38600.1| S1C subfamily peptidase MucD [Neisseria weaveri LMG 5135]
Length = 496
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 189 KISLMESHRPFAM----EESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLL 244
K+ L + H A ++ S+++L+ + ++ V + KDL K G+ +
Sbjct: 149 KVMLNDKHEYMAKLIGSDQQSDVALLKIEAENLPVIKVGNA-KDL---------KPGEWV 198
Query: 245 LAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHA 302
A+G+PFG F NSV+ G S P + D+ PG GGP+F
Sbjct: 199 AAIGAPFG------FDNSVTAGIVSAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLKG 252
Query: 303 HFVGI 307
VGI
Sbjct: 253 QVVGI 257
>gi|417957855|ref|ZP_12600773.1| S1C subfamily peptidase MucD [Neisseria weaveri ATCC 51223]
gi|343967601|gb|EGV35844.1| S1C subfamily peptidase MucD [Neisseria weaveri ATCC 51223]
Length = 496
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 189 KISLMESHRPFAM----EESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLL 244
K+ L + H A ++ S+++L+ + ++ V + KDL K G+ +
Sbjct: 149 KVMLNDKHEYMAKLIGSDQQSDVALLKIEAENLPVIKVGNA-KDL---------KPGEWV 198
Query: 245 LAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHA 302
A+G+PFG F NSV+ G S P + D+ PG GGP+F
Sbjct: 199 AAIGAPFG------FDNSVTAGIVSAKGRSLPNENYTPFIQTDVAINPGNSGGPLFNLKG 252
Query: 303 HFVGI 307
VGI
Sbjct: 253 QVVGI 257
>gi|146329692|ref|YP_001209794.1| serine protease [Dichelobacter nodosus VCS1703A]
gi|146233162|gb|ABQ14140.1| serine protease [Dichelobacter nodosus VCS1703A]
Length = 467
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHF 259
E S+ + + K T +A+L +++ + LP + L + K GD +LA+GSPFG
Sbjct: 126 EYSAEIVGVDKRTD-IALLKIAA--QKLPTVQLGDSDAVKVGDWVLAIGSPFG------- 175
Query: 260 FNSVSMGSVANCYP---PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKS 316
F++ + + + P T + D PG GGP+F +GI + + +S
Sbjct: 176 FDTTATKGIVSALGRSLPSGTYTPFIQTDAAINPGNSGGPLFNGKGEVIGITSQ-IYTRS 234
Query: 317 GA 318
GA
Sbjct: 235 GA 236
>gi|255066664|ref|ZP_05318519.1| S1C subfamily peptidase MucD [Neisseria sicca ATCC 29256]
gi|261364230|ref|ZP_05977113.1| S1C subfamily peptidase MucD [Neisseria mucosa ATCC 25996]
gi|255048992|gb|EET44456.1| S1C subfamily peptidase MucD [Neisseria sicca ATCC 29256]
gi|288567845|gb|EFC89405.1| S1C subfamily peptidase MucD [Neisseria mucosa ATCC 25996]
Length = 517
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + + ++LP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 185 SDTQSDVALLKIDAS-EELPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 237
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 238 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 278
>gi|330501889|ref|YP_004378758.1| 2-alkenal reductase [Pseudomonas mendocina NK-01]
gi|328916175|gb|AEB57006.1| 2-alkenal reductase [Pseudomonas mendocina NK-01]
Length = 380
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 228 DLPNIALTPLNKR-----GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR---STTR 279
DLPN+ L + GD+ LA+G+PFGV +V+MG ++ + +T
Sbjct: 160 DLPNLQAITLGRSDSIRIGDVTLAIGNPFGV------GQTVTMGIISATGRNQLGLNTYE 213
Query: 280 SLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIP 325
+ D PG GG + H + VGI + G++ I IP
Sbjct: 214 DFIQTDAAINPGNSGGALVDAHGNLVGINTAIFSKSGGSQGIGFAIP 260
>gi|220934261|ref|YP_002513160.1| protease Do [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995571|gb|ACL72173.1| protease Do [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 477
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + DLP + L + K G+ +LA+GSPFG F +SV+ G
Sbjct: 139 SDPKSDVALLKIEA--SDLPTLKLGNSEQLKVGEWVLAIGSPFG------FDHSVTAGIV 190
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 191 SAKGRSLPTENYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 231
>gi|339493212|ref|YP_004713505.1| serine protease MucD [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800584|gb|AEJ04416.1| serine protease MucD precursor [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 473
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V K LP + + + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 143 SDVAVLKVEG--KGLPTVKIGRSDELKAGEWVLAIGSPFG------FDHTVTAGIVSATG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F +GI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLFNPKGEVIGI 231
>gi|209520680|ref|ZP_03269431.1| protease Do [Burkholderia sp. H160]
gi|209498880|gb|EDZ98984.1| protease Do [Burkholderia sp. H160]
Length = 512
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + +LP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 186 SDVAVLKIDA--SNLPTVKIGDPRQSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 237
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 238 RSLPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPISEA 297
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
DL+ K H+++G L
Sbjct: 298 IKVKDDLV--------KTGHVSRGRL 315
>gi|411001026|gb|AFV98757.1| serine protease precursor MucD [Candidatus Snodgrassella sp.
T3_2_35043]
Length = 491
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ + S VA+L +S+ +LP + L P K G+ + A+G+PFG F NSV+ G
Sbjct: 164 ADAQSDVALLKISA--DELPVVELGNPEELKVGEWVAAIGAPFG------FDNSVTAGIV 215
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 216 SAKGRSLPEENYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 256
>gi|340361509|ref|ZP_08683934.1| S1C subfamily peptidase MucD [Neisseria macacae ATCC 33926]
gi|349608994|ref|ZP_08888405.1| hypothetical protein HMPREF1028_00380 [Neisseria sp. GT4A_CT1]
gi|339888535|gb|EGQ77984.1| S1C subfamily peptidase MucD [Neisseria macacae ATCC 33926]
gi|348613134|gb|EGY62730.1| hypothetical protein HMPREF1028_00380 [Neisseria sp. GT4A_CT1]
Length = 548
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + + ++LP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 216 SDTQSDVALLKIDAS-EELPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 268
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 269 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 309
>gi|257093148|ref|YP_003166789.1| protease Do [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257045672|gb|ACV34860.1| protease Do [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 479
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
K G+ ++A+GSPFG F NSV+ G S P+ + D+ PG GGP
Sbjct: 163 KVGEWVIAIGSPFG------FDNSVTAGIVSAKGRSLPQENYVPFIQTDVAVNPGNSGGP 216
Query: 297 VFGEHAHFVGI 307
+F VGI
Sbjct: 217 LFNMKGEVVGI 227
>gi|427429392|ref|ZP_18919427.1| Trypsin-like serine protease [Caenispirillum salinarum AK4]
gi|425880585|gb|EKV29281.1| Trypsin-like serine protease [Caenispirillum salinarum AK4]
Length = 475
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 192 LMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGS 249
++ R F E L + + +A+L + + + LP + LT + + GDL+LAVG+
Sbjct: 124 ILADRREFEAE-----VLGTDERTDLAVLRLETDGETLPTLPLTDSDALEVGDLVLAVGN 178
Query: 250 PFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
PFGV ++G + RS + D PG GG + VGI
Sbjct: 179 PFGVGQTTTMGIVSALGRTTGGGDSQHDFRSFIQTDAAINPGNSGGALVDGAGRLVGI 236
>gi|340788059|ref|YP_004753524.1| serine protease MucD/AlgY associated with sigma factor RpoE
[Collimonas fungivorans Ter331]
gi|340553326|gb|AEK62701.1| Serine protease precursor MucD/AlgY associated with sigma factor
RpoE [Collimonas fungivorans Ter331]
Length = 502
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 95/244 (38%), Gaps = 40/244 (16%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
+ + S VA+L + +LP + + +K G+ +LA+GSPFG N+V+ G +
Sbjct: 170 ADTRSDVALLKIDGA--NLPRLTMGDSDKIKAGEWVLAIGSPFG------LENTVTAGII 221
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPWE 327
+ L+ D+ PG GGP+ VGI + + G I +P +
Sbjct: 222 SAKARDTGDYLPLIQTDVAVNPGNSGGPLINMRGEVVGINSQIYSRSGGFMGISFAVPID 281
Query: 328 AIATACSDLLLKEPQNAEKEIHINKGNLNA-VGNSLLFNSHILNGACCYKYEHVDSRCRS 386
A SD L + I + G + V SL GA +R +
Sbjct: 282 E-AMRVSDQLKASGKVTRGRIGVQIGEVTKDVAESLGLPKA--EGALV-------ARVEA 331
Query: 387 PLPIQKALASVCLITIDDGVWASGVLLNDQGLILTNAHLLEPWRFGKT------TVSGWR 440
P KA G+ A ++L G+ + A+ L P G T T+S WR
Sbjct: 332 DGPAAKA-----------GLQAGDIILKFNGVAIDKANDL-PRLVGNTKPGARGTISVWR 379
Query: 441 NGVS 444
G S
Sbjct: 380 KGSS 383
>gi|332524451|ref|ZP_08400663.1| peptidase S1 and S6, chymotrypsin/Hap [Rubrivivax benzoatilyticus
JA2]
gi|332107772|gb|EGJ08996.1| peptidase S1 and S6, chymotrypsin/Hap [Rubrivivax benzoatilyticus
JA2]
Length = 248
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 241 GDLLLAVGSPFGVLSPMHFFNSVS-MGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFG 299
GD ++AVG+PFG+ P + VS + + T +L+ D PG GGP+
Sbjct: 148 GDHVIAVGNPFGI-GPSTSYGIVSGLNREFRSEEGKRTLSNLIQFDAAANPGNSGGPLVT 206
Query: 300 EHAHFVGI---LIRPLRQKSGAEIQLVIPWEAIATAC 333
VGI ++ P Q++ I +P E A A
Sbjct: 207 MDGQVVGIVTAILNPSEQRTFVGIGFAVPIENAAAAA 243
>gi|438000107|ref|YP_007183840.1| serine protease MucD 1 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429339341|gb|AFZ83763.1| serine protease MucD 1 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 445
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
++G +LA+GSPFG+ S +V+ G V+ S + AD+ PG GGP+
Sbjct: 140 RKGQWVLAIGSPFGLDS------TVTAGIVSAIGRDTGDYLSFIQADVAVNPGNSGGPLL 193
Query: 299 GEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIATACSDLLL 338
+ +G+ + + + G I L IP + L L
Sbjct: 194 NLNGEVIGVNSQIISRSGGFMGISLSIPIDEAMRVAEQLRL 234
>gi|395242800|ref|ZP_10419791.1| Serine protease HtrA [Lactobacillus pasteurii CRBIP 24.76]
gi|394479757|emb|CCI86031.1| Serine protease HtrA [Lactobacillus pasteurii CRBIP 24.76]
Length = 411
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 17/138 (12%)
Query: 213 STSRVAILGV-SSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC 271
ST+ +A+L + + Y+ + + + G ++AVGSP G + ++V+ G +
Sbjct: 175 STTDLAVLSIDAKYVTQVAQFGNSKSLQAGQTVIAVGSPLG----SEYASTVTQGII--S 228
Query: 272 YPPRSTT------RSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKS-GAEIQ--- 321
P R T +S++ D PG GGP+ +GI L Q S G ++
Sbjct: 229 APARMITTSSGIQQSVIQTDAAINPGNSGGPLVNSAGQVIGINSMKLAQSSDGTSVEGMG 288
Query: 322 LVIPWEAIATACSDLLLK 339
IP + + L+ K
Sbjct: 289 FAIPANEVVNIVNQLVKK 306
>gi|431928188|ref|YP_007241222.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas stutzeri
RCH2]
gi|431826475|gb|AGA87592.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas stutzeri
RCH2]
Length = 471
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V K LP + + + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 141 SDVAVLKVEG--KGLPTVKIGRSDELKAGEWVLAIGSPFG------FDHTVTAGIVSATG 192
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 193 RSLPNESYVPFIQTDVAINPGNSGGPLFNLKGEVVGI 229
>gi|419797305|ref|ZP_14322795.1| putative serine protease MucD [Neisseria sicca VK64]
gi|385698369|gb|EIG28735.1| putative serine protease MucD [Neisseria sicca VK64]
Length = 504
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S + S VA+L + + ++LP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 172 SDTQSDVALLKIDAS-EELPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTSGIV 224
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 225 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 265
>gi|452749275|ref|ZP_21949042.1| serine protease MucD [Pseudomonas stutzeri NF13]
gi|452006826|gb|EMD99091.1| serine protease MucD [Pseudomonas stutzeri NF13]
Length = 471
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V K LP + + + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 141 SDVAVLKVEG--KGLPTVKIGRSDELKAGEWVLAIGSPFG------FDHTVTAGIVSATG 192
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F +GI
Sbjct: 193 RSLPNESYVPFIQTDVAINPGNSGGPLFNLEGEVIGI 229
>gi|414078283|ref|YP_006997601.1| serine protease S1C [Anabaena sp. 90]
gi|413971699|gb|AFW95788.1| serine protease S1C [Anabaena sp. 90]
Length = 241
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 227 KDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADI 286
K+LP ++L + G + A+GSPFG + N+ + G ++N ++ D
Sbjct: 128 KNLPTLSLAKSAQVGQSVYAIGSPFGYGN----LNNFTAGVLSNI----DEQDGIIKHDA 179
Query: 287 RCLPGMEGGPVFGEHAHFVGI 307
R PG GGP+ A +G+
Sbjct: 180 RINPGNSGGPLLNSQAQVIGV 200
>gi|383457030|ref|YP_005371019.1| S1C family peptidase [Corallococcus coralloides DSM 2259]
gi|380732550|gb|AFE08552.1| S1C family peptidase [Corallococcus coralloides DSM 2259]
Length = 499
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
VA++ + + LP++ L + + GD +LA+G+PFG+ S + SV + S
Sbjct: 167 VAVVKIKEKVDQLPSVKLGDSDAVRVGDWVLAIGNPFGLASSV----SVGILSARAREIG 222
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S L D PG GGP+F VGI
Sbjct: 223 ASVYDDFLQTDAAINPGNSGGPLFNMKGEVVGI 255
>gi|145588590|ref|YP_001155187.1| protease Do [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145046996|gb|ABP33623.1| protease Do [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 483
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 24/163 (14%)
Query: 185 IESNKISLMESHRPFAMEESSNL--SLMSKSTSRVAILGVSSYL---------KDLPNIA 233
I+SN + L +H +E ++ + +L K + +LG+ +DLP +
Sbjct: 114 IDSNGMILTNAH---VVEGATTIYVTLTDKREFKAKLLGMDKRTDVAVVKIDARDLPRLP 170
Query: 234 LTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPG 291
L +K G+ +LA+GSPFG N+V+ G V+ + D+ PG
Sbjct: 171 LGDSSKVRVGEWVLAIGSPFG------LENTVTAGIVSAKSRDTGDYLPFIQTDVAVNPG 224
Query: 292 MEGGPVFGEHAHFVGILIRPLRQKSG-AEIQLVIPW-EAIATA 332
GGP+ +GI + + G I IP EAI A
Sbjct: 225 NSGGPLLNTAGQVIGINSQIFSRSGGYMGISFAIPIDEAIRVA 267
>gi|86157282|ref|YP_464067.1| peptidase S1 and S6, chymotrypsin/Hap [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85773793|gb|ABC80630.1| peptidase S1 and S6, chymotrypsin/Hap [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 301
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR---GDLLLAVGSPFGVLSPMHFFNSVSMGSVA---- 269
VA+L V + +DLP +AL+ +R G+L++A+G+P G F SV++G V+
Sbjct: 79 VAVLRVDA--RDLPALALS--ERRLSVGELVVAIGNPLG------FERSVTVGVVSALHR 128
Query: 270 NCYPPRSTT-RSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
N PR L+ D PG GGP+ VG+
Sbjct: 129 NLAAPRGAVLEGLVQTDASINPGNSGGPLLDAGGAVVGL 167
>gi|398872634|ref|ZP_10627921.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM74]
gi|398202168|gb|EJM89019.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM74]
Length = 474
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 143 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 195 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 231
>gi|398958778|ref|ZP_10677743.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM33]
gi|398145997|gb|EJM34766.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM33]
Length = 474
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 143 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 195 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 231
>gi|398892599|ref|ZP_10645611.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM55]
gi|398185172|gb|EJM72588.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM55]
Length = 474
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 143 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 195 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 231
>gi|388329474|gb|AFK29137.1| DegS [Vibrio sp. PSU3316]
Length = 355
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 217 VAILGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+AIL V +LP I L P K GD++LA+G+P+ L F +S ++
Sbjct: 130 IAILRVEG--SNLPVIPLNPEYKPRVGDVVLAIGNPYN-LGQTTTFGIISATGRSSISDG 186
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIAT 331
R ++ + D G GG + VGI +Q + E I IP +A
Sbjct: 187 R---QAFIQTDAAINEGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPAP-LAN 242
Query: 332 ACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHI 368
++ + + I I+ ++NAV LL N HI
Sbjct: 243 KIMQKIIADGRVIRGYIGIDGQDINAVTARLLGNEHI 279
>gi|424921906|ref|ZP_18345267.1| DeqQ [Pseudomonas fluorescens R124]
gi|404303066|gb|EJZ57028.1| DeqQ [Pseudomonas fluorescens R124]
Length = 476
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 145 SDVALLKIDG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 196
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 197 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 233
>gi|281418119|ref|ZP_06249139.1| peptidase S1 and S6 chymotrypsin/Hap [Clostridium thermocellum
JW20]
gi|281409521|gb|EFB39779.1| peptidase S1 and S6 chymotrypsin/Hap [Clostridium thermocellum
JW20]
Length = 810
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 240 RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFG 299
+G + +A+GSP G+ FN+VS G ++N + +L+ I G GG +F
Sbjct: 520 KGSIAVAIGSPLGL------FNTVSTGIISNFWEANGV--NLIQISIPITHGNSGGALFN 571
Query: 300 EHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL 336
E +GI + + A + I I C D+
Sbjct: 572 ESGKLIGITSSGIGE---ANLNFAISSTHIIPICEDI 605
>gi|398925886|ref|ZP_10662125.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM48]
gi|398171480|gb|EJM59382.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM48]
Length = 474
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 143 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 195 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 231
>gi|444424631|ref|ZP_21220086.1| protease [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444242123|gb|ELU53639.1| protease [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 355
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 217 VAILGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+AIL V +LP I L P K GD++LA+G+P+ L F +S ++
Sbjct: 130 IAILRVEG--SNLPVIPLNPEYKPRVGDVVLAIGNPYN-LGQTTTFGIISATGRSSISDG 186
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIAT 331
R ++ + D G GG + VGI +Q + E I IP +A
Sbjct: 187 R---QAFIQTDAAINEGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPAP-LAN 242
Query: 332 ACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHI 368
++ + + I I+ ++NAV LL N HI
Sbjct: 243 KIMQKIIADGRVIRGYIGIDGQDINAVTARLLGNEHI 279
>gi|77457592|ref|YP_347097.1| peptidase S1C, Do [Pseudomonas fluorescens Pf0-1]
gi|77381595|gb|ABA73108.1| putative exported heat-shock adaptation serine protease
[Pseudomonas fluorescens Pf0-1]
Length = 482
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 151 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 202
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 203 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 239
>gi|398964207|ref|ZP_10680154.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM30]
gi|398148782|gb|EJM37450.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM30]
Length = 476
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 145 SDVALLKIDG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 196
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 197 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 233
>gi|398912893|ref|ZP_10656192.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM49]
gi|398181604|gb|EJM69159.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM49]
Length = 474
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 143 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 195 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 231
>gi|388600412|ref|ZP_10158808.1| protease [Vibrio campbellii DS40M4]
Length = 355
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Query: 217 VAILGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+AIL V +LP I L P K GD++LA+G+P+ L F +S ++
Sbjct: 130 IAILRVEG--SNLPVIPLNPEYKPRVGDVVLAIGNPYN-LGQTTTFGIISATGRSSISDG 186
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAIAT 331
R ++ + D G GG + VGI +Q + E I IP +A
Sbjct: 187 R---QAFIQTDAAINEGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPAP-LAN 242
Query: 332 ACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHI 368
++ + + I I+ ++NAV LL N HI
Sbjct: 243 KIMQKIIADGRVIRGYIGIDGQDINAVTARLLGNEHI 279
>gi|383782001|ref|YP_005466568.1| putative serine protease [Actinoplanes missouriensis 431]
gi|381375234|dbj|BAL92052.1| putative serine protease [Actinoplanes missouriensis 431]
Length = 334
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRS 276
+A+L S +K L +A + K G ++ VG+P G+ +SV+ G V + Y P
Sbjct: 223 LALLRTSREIKGL-GVATDDV-KPGQQVVVVGAPLGLD------DSVTTG-VISAYRPDD 273
Query: 277 TTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL 336
+ D PG GGPV VGI R G I L IP I TAC L
Sbjct: 274 ADGPTIQFDAPINPGNSGGPVVNTSKQVVGIATAKARDAEG--IGLAIP---IETACDTL 328
>gi|424864621|ref|ZP_18288524.1| hypothetical protein NT02SARS_0307 [SAR86 cluster bacterium SAR86B]
gi|400759367|gb|EJP73549.1| hypothetical protein NT02SARS_0307 [SAR86 cluster bacterium SAR86B]
Length = 329
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 209 LMSKSTSRVAILGVSSYLKDLPN---IALTPLNKRGDLLLAVGSPFGV-LSPMHFFNSVS 264
L S S +AIL +++ + N A + + GD +LA+G+P+G+ +S + S +
Sbjct: 96 LGSDQNSDIAILKINAETLEQVNSIDFADSESIRVGDKVLAIGNPYGIGISVSNGIISAT 155
Query: 265 MGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE--IQL 322
N Y +L+ D PG GG + E + +GI + + K+GA I
Sbjct: 156 GRDYGNPY------LNLIQTDAPINPGNSGGALINEQGNLIGINTK-IFSKTGAYQGISF 208
Query: 323 VIPWEAIATACSDLL 337
IP E I S+++
Sbjct: 209 AIPSEKITKIASEII 223
>gi|389861303|ref|YP_006363543.1| peptidase S1 and S6, chymotrypsin/Hap [Thermogladius cellulolyticus
1633]
gi|388526207|gb|AFK51405.1| peptidase S1 and S6, chymotrypsin/Hap [Thermogladius cellulolyticus
1633]
Length = 308
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA----NCYPPRSTTRSLLMADIRCLPGMEG 294
+ G+++LAVGSP G+ F +SV+MG V+ N Y L+ D PG G
Sbjct: 111 RVGEIVLAVGSPLGL-----FEHSVTMGVVSATGRNIYTEELMLEDLVQTDAAINPGNSG 165
Query: 295 GPVFGEHAHFVGIL--IRPLRQKSGAEI 320
GP+ VG+ I P Q G I
Sbjct: 166 GPLVNLRGQAVGVTTAIVPYAQGIGFAI 193
>gi|398979405|ref|ZP_10688415.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM25]
gi|398135835|gb|EJM24940.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM25]
Length = 482
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 151 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 202
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 203 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 239
>gi|333368665|ref|ZP_08460836.1| S1C subfamily peptidase MucD [Psychrobacter sp. 1501(2011)]
gi|332976505|gb|EGK13347.1| S1C subfamily peptidase MucD [Psychrobacter sp. 1501(2011)]
Length = 533
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 211 SKSTSRVAILGVSSY-LKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGS 267
S S VA+L V + K P + + N K G+ +LA+GSPFG + S + S
Sbjct: 198 SDERSDVAVLKVKAMPGKSYPALPMGDSNAVKVGEPVLAIGSPFG----FDYSASAGIVS 253
Query: 268 VANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ R + + +D+ PG GGP+F + +GI
Sbjct: 254 AKSRNFSRDISVPFIQSDVALNPGNSGGPLFNRNGQVIGI 293
>gi|398849767|ref|ZP_10606495.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM80]
gi|398250412|gb|EJN35735.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM80]
Length = 477
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 146 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 197
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 198 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 234
>gi|419953231|ref|ZP_14469376.1| serine protease MucD [Pseudomonas stutzeri TS44]
gi|387969823|gb|EIK54103.1| serine protease MucD [Pseudomonas stutzeri TS44]
Length = 469
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYP- 273
VA+L V K LP + L + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 141 VAVLKVEG--KGLPTVKLGDSSALKVGEWVLAIGSPFG------FDHTVTAGIVSATGRS 192
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 193 LPNESYVPFIQTDVAINPGNSGGPLFNLEGEVVGI 227
>gi|374621712|ref|ZP_09694242.1| 2-alkenal reductase [Ectothiorhodospira sp. PHS-1]
gi|373940843|gb|EHQ51388.1| 2-alkenal reductase [Ectothiorhodospira sp. PHS-1]
Length = 386
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
+AIL + + LP+I + + GD++LA+G+PFGV +V++G V+
Sbjct: 157 LAILRIDVAGRTLPSIVVGASAGLRVGDVVLAIGNPFGV------GQTVTLGIVSATGRS 210
Query: 275 R---STTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIA 330
R +T + D PG GG + H VGI + G++ I IP +
Sbjct: 211 RLGINTYEDFIQTDAAINPGNSGGALVNAHGELVGINTAIFTRSGGSQGIGFAIPVDLAR 270
Query: 331 TACSDLLLK 339
+ ++ K
Sbjct: 271 DVMTQIIEK 279
>gi|254468861|ref|ZP_05082267.1| peptidase S1C, Do [beta proteobacterium KB13]
gi|207087671|gb|EDZ64954.1| peptidase S1C, Do [beta proteobacterium KB13]
Length = 468
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
K G+ + A+GSPFG+ S M +V + S P+ + D+ PG GGP+F
Sbjct: 164 KVGEWVAAIGSPFGLESTM----TVGVVSALGRNLPQENYVPFIQTDVAINPGNSGGPLF 219
Query: 299 GEHAHFVGI 307
VGI
Sbjct: 220 NTSGEVVGI 228
>gi|444921577|ref|ZP_21241412.1| Periplasmic serine endoprotease DegP-like protein [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507304|gb|ELV07481.1| Periplasmic serine endoprotease DegP-like protein [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 460
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGV--LSPMHFFNSVSMGSVAN 270
S VA+L + + K+LP + + + K G ++AVGSPFG+ + +S+ ++
Sbjct: 137 SDVAVLQIDA--KNLPAVKIADVKDLKVGQWVMAVGSPFGLDYTATQGIISSLGRNLPSD 194
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
Y P + D PG GGP+F +GI
Sbjct: 195 SYTP------FIQTDAAINPGNSGGPLFNTKGEVIGI 225
>gi|300113374|ref|YP_003759949.1| protease Do [Nitrosococcus watsonii C-113]
gi|299539311|gb|ADJ27628.1| protease Do [Nitrosococcus watsonii C-113]
Length = 471
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S S +A+L V + K+LP + + + K G+ +LA+GSPFG F +S + G V
Sbjct: 135 SDERSDLALLKVEA--KNLPTLKQSSASQLKVGEWVLAIGSPFG------FEHSATAGIV 186
Query: 269 ANCYP--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ P + + D+ PG GGP+F VGI
Sbjct: 187 SALGRSLPEESYVPFIQTDVAINPGNSGGPLFNLTGEVVGI 227
>gi|71907652|ref|YP_285239.1| peptidase S1C, Do [Dechloromonas aromatica RCB]
gi|71847273|gb|AAZ46769.1| Peptidase S1C, Do [Dechloromonas aromatica RCB]
Length = 473
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
K G+ ++A+GSPFG F NSV+ G S P+ + D+ PG GGP
Sbjct: 160 KVGEWVVAIGSPFG------FDNSVTAGIVSAKGRSLPQENYVPFIQTDVAINPGNSGGP 213
Query: 297 VFGEHAHFVGI 307
+F VGI
Sbjct: 214 LFNMRGEVVGI 224
>gi|157412444|ref|YP_001483310.1| serine protease [Prochlorococcus marinus str. MIT 9215]
gi|157387019|gb|ABV49724.1| possible serine protease [Prochlorococcus marinus str. MIT 9215]
Length = 385
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTR--------SLLMADIRCLP 290
K GD +AVG+PFG N+V++G ++N R+ T+ L+ D P
Sbjct: 186 KVGDWAIAVGNPFG------LENTVTLGIISNLN--RNVTQLGIYDKKLELIQTDAAINP 237
Query: 291 GMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
G GGP+ +GI +R GA + IP
Sbjct: 238 GNSGGPLLNSDGEVIGINTL-IRSGPGAGLSFAIP 271
>gi|399519348|ref|ZP_10760143.1| 2-alkenal reductase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112444|emb|CCH36701.1| 2-alkenal reductase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 380
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 228 DLPNIALTPLNKR-----GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPR---STTR 279
DLPN+ L + GD+ LA+G+PFGV +V+MG ++ + +T
Sbjct: 160 DLPNLPAITLGRSDSIRIGDVTLAIGNPFGV------GQTVTMGIISATGRNQLGLNTYE 213
Query: 280 SLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
+ D PG GG + H + VGI + G++ I IP +
Sbjct: 214 DFIQTDAAINPGNSGGALVDAHGNLVGINTAIFSKSGGSQGIGFAIPLK 262
>gi|34497516|ref|NP_901731.1| serine protease MucD [Chromobacterium violaceum ATCC 12472]
gi|34103371|gb|AAQ59733.1| serine protease MucD precursor [Chromobacterium violaceum ATCC
12472]
Length = 470
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + S VA+L + + ++LP + + P + K G +LA+GSPFG F N+ + G V
Sbjct: 130 SDARSDVALLKIDA--QNLPVVRMGDPKSLKVGQWVLAIGSPFG------FENTATSGIV 181
Query: 269 A--NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ N P + + D PG GGP+F VG+
Sbjct: 182 SGKNRMLPDESAVQFIQTDAAVNPGNSGGPLFNLKGEVVGV 222
>gi|289676652|ref|ZP_06497542.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF, partial [Pseudomonas
syringae pv. syringae FF5]
Length = 316
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCYPPRSTTRSLLMADIRCLPGMEGGP 296
K G+ +LA+GSPFG F +SV+ G S P T + D+ PG GGP
Sbjct: 9 KVGEWVLAIGSPFG------FDHSVTKGIVSAKGRSLPNDTYVPFIQTDVAINPGNSGGP 62
Query: 297 VFGEHAHFVGI 307
+F VGI
Sbjct: 63 LFNMAGEVVGI 73
>gi|125973959|ref|YP_001037869.1| peptidase S1 and S6, chymotrypsin/Hap [Clostridium thermocellum
ATCC 27405]
gi|256005794|ref|ZP_05430746.1| peptidase S1 and S6 chymotrypsin/Hap [Clostridium thermocellum DSM
2360]
gi|385778163|ref|YP_005687328.1| TIR protein [Clostridium thermocellum DSM 1313]
gi|419721562|ref|ZP_14248724.1| TIR protein [Clostridium thermocellum AD2]
gi|419727230|ref|ZP_14254222.1| TIR protein [Clostridium thermocellum YS]
gi|125714184|gb|ABN52676.1| TIR protein [Clostridium thermocellum ATCC 27405]
gi|255990240|gb|EEU00370.1| peptidase S1 and S6 chymotrypsin/Hap [Clostridium thermocellum DSM
2360]
gi|316939843|gb|ADU73877.1| TIR protein [Clostridium thermocellum DSM 1313]
gi|380769375|gb|EIC03303.1| TIR protein [Clostridium thermocellum YS]
gi|380782414|gb|EIC12050.1| TIR protein [Clostridium thermocellum AD2]
Length = 845
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 240 RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFG 299
+G + +A+GSP G+ FN+VS G ++N + +L+ I G GG +F
Sbjct: 555 KGSIAVAIGSPLGL------FNTVSTGIISNFWEANGV--NLIQISIPITHGNSGGALFN 606
Query: 300 EHAHFVGILIRPLRQKSGAEIQLVIPWEAIATACSDL 336
E +GI + + A + I I C D+
Sbjct: 607 ESGKLIGITSSGIGE---ANLNFAISSTHIIPICEDI 640
>gi|312602523|ref|YP_004022368.1| endopeptidase degP [Burkholderia rhizoxinica HKI 454]
gi|312169837|emb|CBW76849.1| Endopeptidase degP (EC 3.4.21.-) [Burkholderia rhizoxinica HKI 454]
Length = 486
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 17/148 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SV 268
S S VA+L + + + I +K G ++A+GSP+G F N+V+ G S
Sbjct: 160 SDKQSDVAVLKIDASNLPVVKIGDPKQSKVGQWVVAIGSPYG------FDNTVTSGIISA 213
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
+ P + D+ PG GGP+F +GI Q G + + IP +
Sbjct: 214 KSRALPDENYTQFIQTDVPVNPGNSGGPLFNLQGDVIGINSMIYSQTGGFQGLSFAIPID 273
Query: 328 AIATACSDLLLKEPQNAEKEIHINKGNL 355
A D L+K H+++G L
Sbjct: 274 E-AIRVKDQLVKTG-------HVSRGRL 293
>gi|226940385|ref|YP_002795459.1| MucD [Laribacter hongkongensis HLHK9]
gi|226715312|gb|ACO74450.1| MucD [Laribacter hongkongensis HLHK9]
Length = 477
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L + ++ +LP + L N + G+ +LA+GSPFG F N+V+ G S
Sbjct: 143 VALLKIDAH--NLPAVELGNPNTLRVGEWVLAIGSPFG------FDNTVTSGIVSAKGRQ 194
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 195 LPDENYVPFIQTDVAVNPGNSGGPLFDMDGKVVGI 229
>gi|254526893|ref|ZP_05138945.1| hypothetical protein P9202_1546 [Prochlorococcus marinus str. MIT
9202]
gi|221538317|gb|EEE40770.1| hypothetical protein P9202_1546 [Prochlorococcus marinus str. MIT
9202]
Length = 373
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 17/95 (17%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTR--------SLLMADIRCLP 290
K GD +AVG+PFG+ N+V++G ++N R+ T+ L+ D P
Sbjct: 174 KVGDWAIAVGNPFGLE------NTVTLGIISNLN--RNVTQLGIYDKKLELIQTDAAINP 225
Query: 291 GMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIP 325
G GGP+ +GI +R GA + IP
Sbjct: 226 GNSGGPLLNSDGEVIGINTL-IRSGPGAGLSFAIP 259
>gi|219849776|ref|YP_002464209.1| 2-alkenal reductase [Chloroflexus aggregans DSM 9485]
gi|219544035|gb|ACL25773.1| 2-alkenal reductase [Chloroflexus aggregans DSM 9485]
Length = 393
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVA- 269
+ S + +A+L V + + I + + G+ +LA+GSP G +F N+V+ G V+
Sbjct: 149 TDSLNDIAVLKVDGEVPGVAQIGDSAALQPGETVLAIGSPLG-----NFRNTVTAGVVSA 203
Query: 270 -NCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSG 317
N P S L+ D G GGP+ VGI +R G
Sbjct: 204 LNRSVPGSGMEGLIQTDAAINSGNSGGPLINLKGEVVGINTMVVRNDFG 252
>gi|156973197|ref|YP_001444104.1| protease [Vibrio harveyi ATCC BAA-1116]
gi|156524791|gb|ABU69877.1| hypothetical protein VIBHAR_00877 [Vibrio harveyi ATCC BAA-1116]
Length = 355
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
+ +AIL V +LP I L P K GD++LA+G+P+ + F + S +
Sbjct: 128 TDIAILRVEG--SNLPVIPLNPEYKPRVGDVVLAIGNPYNLGQTTTF----GIISATGRW 181
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIPWEAI 329
++ + D G GG + VGI +Q + E I IP I
Sbjct: 182 SISDGRQAFIQTDAAINEGNSGGALVNTQGELVGINTASFQQATDLETYGISFAIPAP-I 240
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHI 368
A ++ + + I I+ ++NAV LL N HI
Sbjct: 241 ANKIMQKIIADGRVIRGYIGIDGQDINAVTARLLGNEHI 279
>gi|403049484|ref|ZP_10903968.1| MucD [SAR86 cluster bacterium SAR86D]
Length = 252
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 224 SYLKDLPNIALTPLN-------KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV-ANCYPPR 275
+ LK N L P+N K GD +LA+G+P+G+ SVS G V A
Sbjct: 111 AVLKIKSNEKLNPINISDSSELKIGDKVLAIGNPYGIGI------SVSSGIVSATGRDYG 164
Query: 276 STTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACS 334
+ L+ D PG GG + E+ + +GI + + G + + IP I S
Sbjct: 165 NPYLELIQTDAAINPGNSGGALINENGNLIGINTKIFSKTGGFQGLGFAIPSNKIVQIAS 224
Query: 335 DLL 337
+L+
Sbjct: 225 ELI 227
>gi|350561400|ref|ZP_08930238.1| protease Do [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780432|gb|EGZ34750.1| protease Do [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 466
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + DLP + L + G+ +LA+GSPFG F +SV+ G
Sbjct: 130 SDPQSDVAVLKIDA--DDLPTLKLGSSERLRVGEWVLAIGSPFG------FDHSVTAGIV 181
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 182 SAKGRSLPSDNYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 222
>gi|330836909|ref|YP_004411550.1| DegP2 peptidase [Sphaerochaeta coccoides DSM 17374]
gi|329748812|gb|AEC02168.1| DegP2 peptidase [Sphaerochaeta coccoides DSM 17374]
Length = 433
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRS-----LLMADIRCLPGME 293
K G ++A+G+PFG + ++++G+++ P S + +L D PG
Sbjct: 208 KVGQKVIAIGNPFG------YDRTMTIGTISGLGRPVSDGKGQVIMGMLQTDAAINPGNS 261
Query: 294 GGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAIATACSDLL 337
GGP+ +GI SGA+ I IP + A +L+
Sbjct: 262 GGPLLNSKGEMIGINTSMYSVSSGAQGISFAIPIDTAIAAIPELI 306
>gi|392420219|ref|YP_006456823.1| serine protease MucD [Pseudomonas stutzeri CCUG 29243]
gi|390982407|gb|AFM32400.1| serine protease MucD [Pseudomonas stutzeri CCUG 29243]
Length = 471
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V K LP + + + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 141 SDVAVLKVEG--KGLPTVKIGRSDELKAGEWVLAIGSPFG------FDHTVTAGIVSATG 192
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F +GI
Sbjct: 193 RSLPNESYVPFIQTDVAINPGNSGGPLFNLDGEVIGI 229
>gi|418293046|ref|ZP_12904969.1| serine protease MucD [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064452|gb|EHY77195.1| serine protease MucD [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 471
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V K LP + + + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 141 SDVAVLKVEG--KGLPTVKIGRSDELKAGEWVLAIGSPFG------FDHTVTAGIVSATG 192
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F +GI
Sbjct: 193 RSLPNESYVPFIQTDVAINPGNSGGPLFNLKGEVIGI 229
>gi|108761525|ref|YP_631204.1| S1C family peptidase [Myxococcus xanthus DK 1622]
gi|108465405|gb|ABF90590.1| peptidase, S1C (protease Do) subfamily [Myxococcus xanthus DK 1622]
Length = 493
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
VA++ + +++LP + L + + GD ++A+G+PFG+ S SVS+G V+
Sbjct: 161 VALVRLKEKVENLPTVKLGDSDALRVGDWVVAIGNPFGLAS------SVSLGIVSARARE 214
Query: 275 RSTTR--SLLMADIRCLPGMEGGPVFGEHAHFVGI 307
++ L D PG GGP+F VGI
Sbjct: 215 IGASQYDEFLQTDAAINPGNSGGPLFNMKGEVVGI 249
>gi|407069962|ref|ZP_11100800.1| protease DegS [Vibrio cyclitrophicus ZF14]
Length = 354
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + +AIL VS +LP I L P K GD++LA+G+P+ L F +S +
Sbjct: 123 SDKRTDIAILRVSG--DNLPVIPLNPSYKANVGDVVLAIGNPYN-LGQTTTFGIIS--AT 177
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE---IQLVIP 325
++ + D G GG + VGI +Q + E I IP
Sbjct: 178 GRSSISADGHQAFIQTDAAINEGNSGGALVNSQGELVGINTASFQQATDMETYGISFAIP 237
Query: 326 WEAIATACSDLLLKEPQNAEKEIHINKGNLNAVGNSLLFNSHI 368
+ +A + ++ + + I I+ ++N+V + LL N +I
Sbjct: 238 YP-LANKIMEKIIADGRVIRGYIGIDGQDINSVTSRLLGNKNI 279
>gi|146281611|ref|YP_001171764.1| serine protease MucD [Pseudomonas stutzeri A1501]
gi|386019818|ref|YP_005937842.1| serine protease MucD [Pseudomonas stutzeri DSM 4166]
gi|145569816|gb|ABP78922.1| serine protease MucD precursor [Pseudomonas stutzeri A1501]
gi|327479790|gb|AEA83100.1| serine protease MucD precursor [Pseudomonas stutzeri DSM 4166]
Length = 473
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L V K LP + + + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 143 SDVAVLKVEG--KGLPTVKIGRSDELKAGEWVLAIGSPFG------FDHTVTAGIVSATG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F +GI
Sbjct: 195 RSLPNESYVPFIQTDVAINPGNSGGPLFNLKGEVIGI 231
>gi|451813037|ref|YP_007449490.1| Do/DeqQ family serine endopeptidase/chaperone [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|451779006|gb|AGF49886.1| Do/DeqQ family serine endopeptidase/chaperone [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 493
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 239 KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVF 298
++G +LA+GSPFG+ S +V+ G V+ S + AD+ PG GGP+
Sbjct: 188 RKGQWVLAIGSPFGLDS------TVTAGIVSAIGRDTGDYLSFIQADVAVNPGNSGGPLL 241
Query: 299 GEHAHFVGILIRPLRQKSG-AEIQLVIPWEAIATACSDLLL 338
+ +G+ + + + G I L IP + L L
Sbjct: 242 NLNGEVIGVNSQIISRSGGFMGISLSIPIDEAMRVAEQLRL 282
>gi|262373083|ref|ZP_06066362.1| periplasmic serine peptidase DegS [Acinetobacter junii SH205]
gi|262313108|gb|EEY94193.1| periplasmic serine peptidase DegS [Acinetobacter junii SH205]
Length = 458
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSV 268
S + VA+L V+ + P + + +N K G+ +LA+GSPFG F S S G V
Sbjct: 128 SDERTDVAVLKVNG--NNFPELKIGDVNRLKVGEPVLAIGSPFG------FDYSASAGIV 179
Query: 269 ANCYPPRS--TTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ S T+ + D PG GGP+F + +G+
Sbjct: 180 SAKSRNMSGETSVPFIQTDAALNPGNSGGPLFNQQGEVIGV 220
>gi|430760137|ref|YP_007215994.1| serine protease MucD - like protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430009761|gb|AGA32513.1| serine protease MucD - like protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 468
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + DLP + L + G+ +LA+GSPFG F +SV+ G
Sbjct: 132 SDPQSDVAVLKIDA--DDLPTLKLGSSERLRVGEWVLAIGSPFG------FDHSVTAGIV 183
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 184 SAKGRSLPSDNYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 224
>gi|91785079|ref|YP_560285.1| serine protease [Burkholderia xenovorans LB400]
gi|91689033|gb|ABE32233.1| Serine protease, subfamily S1C [Burkholderia xenovorans LB400]
Length = 503
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + +LP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 178 SDVAVLKIDA--SNLPTVKIGDPRQSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 229
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 230 RSLPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEA 289
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
D++ K H+++G L
Sbjct: 290 IKVKDDIV--------KTGHVSRGRL 307
>gi|89094538|ref|ZP_01167476.1| alginate biosynthesis negative regulator, serine protease AlgY
[Neptuniibacter caesariensis]
gi|89081137|gb|EAR60371.1| alginate biosynthesis negative regulator, serine protease AlgY
[Oceanospirillum sp. MED92]
Length = 468
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + +DLP + + K G+ +LA+GSPFG F +SV+ G
Sbjct: 133 SDERSDVALLKIDA--EDLPTVKVGKSAKLEVGEWVLAIGSPFG------FDHSVTAGIV 184
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S T + D+ PG GGP+F +GI
Sbjct: 185 SAKERALANETYVPFIQTDVAINPGNSGGPLFNLDGEVIGI 225
>gi|187925238|ref|YP_001896880.1| protease Do [Burkholderia phytofirmans PsJN]
gi|187716432|gb|ACD17656.1| protease Do [Burkholderia phytofirmans PsJN]
Length = 504
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + +LP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 179 SDVAVLKIDA--SNLPTVKIGDPRQSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 230
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 231 RSLPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEA 290
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
D++ K H+++G L
Sbjct: 291 IKVKDDIV--------KTGHVSRGRL 308
>gi|115380213|ref|ZP_01467237.1| serine protease, HtrA/DegQ/DegS family [Stigmatella aurantiaca
DW4/3-1]
gi|310822356|ref|YP_003954714.1| peptidase, s1c (protease do) subfamily [Stigmatella aurantiaca
DW4/3-1]
gi|115362780|gb|EAU61991.1| serine protease, HtrA/DegQ/DegS family [Stigmatella aurantiaca
DW4/3-1]
gi|309395428|gb|ADO72887.1| Peptidase, S1C (Protease Do) subfamily [Stigmatella aurantiaca
DW4/3-1]
Length = 480
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA++ + L+ LP +AL + + GD L+A+G+PFG+ S SVS+G S
Sbjct: 148 VAVIKLKGKLEGLPTVALGDSEALRVGDWLVAIGNPFGLAS------SVSLGILSAKARD 201
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
L D PG GGP+F +GI
Sbjct: 202 IQAGPFDDFLQTDAAINPGNSGGPLFNMKGEVIGI 236
>gi|254669974|emb|CBA04645.1| serine protease MucD precursor [Neisseria meningitidis alpha153]
Length = 465
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIAL-TPLN-KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S VA+L + + ++LP + + P + K G+ + A+G+PFG F NSV+ G
Sbjct: 167 SDVQSDVALLKIDA-TEELPVVKIGNPKDLKPGEWVAAIGAPFG------FDNSVTAGIV 219
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + + D+ PG GGP+F VGI
Sbjct: 220 SAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGI 260
>gi|426408193|ref|YP_007028292.1| protease Do [Pseudomonas sp. UW4]
gi|426266410|gb|AFY18487.1| protease Do [Pseudomonas sp. UW4]
Length = 474
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 143 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAVG 194
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 195 RSLPNENYVPFIQTDVPINPGNSGGPLFNLDGEVVGI 231
>gi|217970718|ref|YP_002355952.1| protease Do [Thauera sp. MZ1T]
gi|217508045|gb|ACK55056.1| protease Do [Thauera sp. MZ1T]
Length = 487
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ + S VA++ + + KDLP++ L G+ +LA+GSPFG F SV+ G
Sbjct: 149 ADARSDVALIRIEA--KDLPHVVLGDPEALAVGEWVLAIGSPFG------FEQSVTAGIV 200
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F +GI
Sbjct: 201 SAKGRSLPDENFVPFIQTDVAINPGNSGGPLFNLRGEVIGI 241
>gi|385208180|ref|ZP_10035048.1| periplasmic serine protease, Do/DeqQ family [Burkholderia sp.
Ch1-1]
gi|385180518|gb|EIF29794.1| periplasmic serine protease, Do/DeqQ family [Burkholderia sp.
Ch1-1]
Length = 503
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 21/146 (14%)
Query: 215 SRVAILGVSSYLKDLPNIALTP--LNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L + + +LP + + +K G ++A+GSP+G F N+V+ G S +
Sbjct: 178 SDVAVLKIDA--SNLPTVKIGDPRQSKVGQWVVAIGSPYG------FDNTVTSGIISAKS 229
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWEAI 329
P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 230 RSLPNENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPINEA 289
Query: 330 ATACSDLLLKEPQNAEKEIHINKGNL 355
D++ K H+++G L
Sbjct: 290 IKVKDDIV--------KTGHVSRGRL 307
>gi|167570691|ref|ZP_02363565.1| serine protease, MucD [Burkholderia oklahomensis C6786]
Length = 502
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPP 274
VAI+ +S+ +LP +A+ NK G+ ++A+GSPFG N+V+ G V+
Sbjct: 174 VAIVKISA--SNLPTVAIGDSNKVRVGEWVVAIGSPFG------LDNTVTAGIVSAKGRN 225
Query: 275 RSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
+ D+ PG GGP+ +GI
Sbjct: 226 TGDYLPFIQTDVAVNPGNSGGPLINMQGEVIGI 258
>gi|398993985|ref|ZP_10696916.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM21]
gi|398133490|gb|EJM22690.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM21]
Length = 475
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCY 272
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G ++
Sbjct: 144 SDVALLKIEG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIISAIG 195
Query: 273 P--PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F + VGI
Sbjct: 196 RSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGI 232
>gi|206561166|ref|YP_002231931.1| subfamily S1B serine peptidase [Burkholderia cenocepacia J2315]
gi|444364106|ref|ZP_21164448.1| peptidase Do [Burkholderia cenocepacia BC7]
gi|444370716|ref|ZP_21170354.1| peptidase Do [Burkholderia cenocepacia K56-2Valvano]
gi|198037208|emb|CAR53129.1| serine peptidase, subfamily S1B [Burkholderia cenocepacia J2315]
gi|443593520|gb|ELT62254.1| peptidase Do [Burkholderia cenocepacia BC7]
gi|443596940|gb|ELT65402.1| peptidase Do [Burkholderia cenocepacia K56-2Valvano]
Length = 494
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 17/148 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--SV 268
S S VA+L + + + I +K G ++A+GSP+G F N+V+ G S
Sbjct: 167 SDKQSDVAVLKIDASGLPIVKIGDPAQSKVGQWVVAIGSPYG------FDNTVTSGIISA 220
Query: 269 ANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAE-IQLVIPWE 327
+ P + D+ PG GGP+F +GI Q G + + IP
Sbjct: 221 KSRALPDENYTPFIQTDVPVNPGNSGGPLFNLQGEVIGINSMIYSQTGGFQGLSFAIPIN 280
Query: 328 AIATACSDLLLKEPQNAEKEIHINKGNL 355
A D L+K H+++G L
Sbjct: 281 E-AIKVKDELVKTG-------HVSRGRL 300
>gi|386396933|ref|ZP_10081711.1| trypsin-like serine protease with C-terminal PDZ domain
[Bradyrhizobium sp. WSM1253]
gi|385737559|gb|EIG57755.1| trypsin-like serine protease with C-terminal PDZ domain
[Bradyrhizobium sp. WSM1253]
Length = 339
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 226 LKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLM 283
++DLP AL + +RG L++A+G+P G S + ++G R T ++
Sbjct: 121 VRDLPYAALGNSKTLRRGQLVIAIGNPLGFESTVTAGVVSALGRSIRSVSGR-TIEDVIQ 179
Query: 284 ADIRCLPGMEGGPVFGEHAHFVGI 307
D PG GGP+ +A +GI
Sbjct: 180 TDAALNPGNSGGPLVSSNAEVIGI 203
>gi|383773513|ref|YP_005452579.1| serine protease DO-like precursor [Bradyrhizobium sp. S23321]
gi|381361637|dbj|BAL78467.1| probable serine protease DO-like precursor [Bradyrhizobium sp.
S23321]
Length = 339
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 226 LKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLM 283
++DLP AL KRG L++A+G+P G S + ++G R T ++
Sbjct: 121 VRDLPYAALGNSQSLKRGQLVIAIGNPLGFESTVTAGVVSALGRSIRSVSGR-TIEDVIQ 179
Query: 284 ADIRCLPGMEGGPVFGEHAHFVGI 307
D PG GGP+ +A +GI
Sbjct: 180 TDAALNPGNSGGPLVSSNAEVIGI 203
>gi|409393578|ref|ZP_11244885.1| serine protease MucD [Pseudomonas sp. Chol1]
gi|409395235|ref|ZP_11246330.1| serine protease MucD [Pseudomonas sp. Chol1]
gi|409120126|gb|EKM96489.1| serine protease MucD [Pseudomonas sp. Chol1]
gi|409121911|gb|EKM97972.1| serine protease MucD [Pseudomonas sp. Chol1]
Length = 469
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIAL--TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYP- 273
VA+L V K LP + L + K G+ +LA+GSPFG F ++V+ G V+
Sbjct: 141 VAVLKVEG--KGLPTVKLGDSSALKVGEWVLAIGSPFG------FDHTVTAGIVSATGRS 192
Query: 274 -PRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 193 LPNESYVPFIQTDVAINPGNSGGPLFNLAGEVVGI 227
>gi|222617443|gb|EEE53575.1| hypothetical protein OsJ_36809 [Oryza sativa Japonica Group]
Length = 160
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 69 GLIVTVASVVEPFLLPQYRDKDTSEGQPELITGSQIDFLVEGK 111
G+ +T AS+VEPFL+ + + + + QP L+ + +D LVE K
Sbjct: 97 GVALTSASLVEPFLVEEQHNSPSQDMQPRLVPEAHLDVLVESK 139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,164,266,721
Number of Sequences: 23463169
Number of extensions: 392195619
Number of successful extensions: 839121
Number of sequences better than 100.0: 565
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 528
Number of HSP's that attempted gapping in prelim test: 837978
Number of HSP's gapped (non-prelim): 1102
length of query: 566
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 418
effective length of database: 8,886,646,355
effective search space: 3714618176390
effective search space used: 3714618176390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)