Query 008429
Match_columns 565
No_of_seqs 454 out of 2379
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 03:21:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008429.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008429hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4feh_A Oxidoreductase DPRE1; a 100.0 1E-39 3.5E-44 355.7 34.3 420 44-534 32-476 (481)
2 2vfr_A Xylitol oxidase, aldito 100.0 3.5E-39 1.2E-43 347.0 30.6 394 43-534 8-417 (422)
3 3js8_A Cholesterol oxidase; ch 100.0 5.5E-34 1.9E-38 311.6 30.8 428 45-534 19-536 (540)
4 2exr_A Cytokinin dehydrogenase 100.0 3.2E-33 1.1E-37 308.0 33.5 393 59-528 67-513 (524)
5 2i0k_A Oxidoreductase; MIX alp 100.0 4.3E-33 1.5E-37 309.3 33.6 453 31-534 12-557 (561)
6 3pm9_A Putative oxidoreductase 100.0 8.1E-32 2.8E-36 293.3 29.0 379 59-528 57-470 (476)
7 4bby_A Alkyldihydroxyacetoneph 100.0 9.2E-32 3.2E-36 303.9 29.4 194 59-257 211-409 (658)
8 1w1o_A Cytokinin dehydrogenase 100.0 2.7E-30 9.1E-35 285.7 37.7 188 59-256 74-269 (534)
9 3tsh_A Pollen allergen PHL P 4 100.0 1.3E-29 4.6E-34 278.0 21.9 219 31-256 24-252 (500)
10 2uuu_A Alkyldihydroxyacetoneph 100.0 1.6E-28 5.4E-33 273.3 30.4 194 59-257 143-339 (584)
11 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2.3E-29 7.9E-34 273.3 21.1 213 31-257 16-234 (459)
12 3rja_A Carbohydrate oxidase; p 100.0 3.7E-29 1.3E-33 272.4 17.7 217 30-257 13-237 (473)
13 3fw9_A Reticuline oxidase; BI- 100.0 1.4E-28 4.8E-33 268.8 15.9 218 29-256 15-244 (495)
14 3vte_A Tetrahydrocannabinolic 100.0 3.4E-28 1.2E-32 266.6 17.4 218 30-257 24-253 (518)
15 1zr6_A Glucooligosaccharide ox 99.9 1.6E-27 5.6E-32 261.4 18.4 214 31-257 20-240 (503)
16 3pop_A GILR oxidase; FAD bindi 99.9 3.2E-27 1.1E-31 258.5 15.1 186 31-228 12-208 (501)
17 2wdx_A Putative hexose oxidase 99.9 9.2E-27 3.2E-31 256.4 17.9 216 30-257 33-278 (523)
18 2y3s_A TAML; oxidoreductase; H 99.9 1.2E-26 4.2E-31 255.8 18.1 217 29-257 34-280 (530)
19 2ipi_A Aclacinomycin oxidoredu 99.9 2.2E-26 7.7E-31 253.3 18.9 216 31-257 32-276 (521)
20 1e8g_A Vanillyl-alcohol oxidas 99.9 1.6E-24 5.3E-29 240.7 30.3 184 59-252 76-292 (560)
21 1wvf_A 4-cresol dehydrogenase 99.9 7.6E-24 2.6E-28 233.3 21.0 190 59-256 62-267 (520)
22 1f0x_A DLDH, D-lactate dehydro 99.9 3.6E-24 1.2E-28 237.1 12.7 192 59-257 51-297 (571)
23 2yvs_A Glycolate oxidase subun 99.8 1.2E-19 4.1E-24 177.9 13.1 117 118-239 1-122 (219)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.8 5.8E-19 2E-23 183.2 13.0 144 59-231 54-209 (326)
25 3tx1_A UDP-N-acetylenolpyruvoy 99.8 7.1E-19 2.4E-23 181.9 12.8 148 59-233 60-217 (322)
26 3i99_A UDP-N-acetylenolpyruvoy 99.7 1.4E-17 4.7E-22 174.2 12.0 149 59-233 36-199 (357)
27 1uxy_A MURB, uridine diphospho 99.7 8.3E-17 2.8E-21 167.6 15.9 153 59-233 20-183 (340)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.6 7.5E-16 2.6E-20 155.2 9.3 154 59-256 27-187 (268)
29 1ffv_C CUTM, flavoprotein of c 97.6 5.2E-05 1.8E-09 76.8 6.1 110 104-231 47-177 (287)
30 2w3s_A Xanthine dehydrogenase; 96.5 0.0012 4E-08 71.2 3.3 112 104-230 218-345 (462)
31 1n62_C Carbon monoxide dehydro 95.9 0.0035 1.2E-07 63.3 3.4 109 104-230 47-176 (288)
32 3nvz_B Xanthine dehydrogenase/ 93.6 0.068 2.3E-06 54.3 5.5 113 104-230 51-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 93.5 0.043 1.5E-06 55.3 3.7 108 104-229 46-174 (288)
34 3hrd_C Nicotinate dehydrogenas 82.9 0.28 9.5E-06 49.5 0.4 111 104-229 46-177 (296)
35 3unc_A Xanthine dehydrogenase/ 75.2 2.3 7.8E-05 51.4 5.1 37 104-143 274-313 (1332)
36 2bvf_A 6-hydroxy-D-nicotine ox 60.2 9.4 0.00032 40.5 5.6 54 476-530 389-450 (459)
37 3zyv_A AOH1; oxidoreductase, m 48.6 31 0.0011 41.7 8.0 39 105-143 282-320 (1335)
38 1wvf_A 4-cresol dehydrogenase 45.7 31 0.0011 37.1 6.8 22 392-413 391-414 (520)
39 1und_A Advillin, P92; actin bi 41.0 11 0.00038 25.6 1.5 20 499-518 1-22 (37)
40 1rm6_B 4-hydroxybenzoyl-COA re 34.4 17 0.00057 36.9 2.2 59 104-165 46-117 (324)
41 3tsh_A Pollen allergen PHL P 4 33.0 28 0.00094 37.2 3.8 54 476-529 414-488 (500)
42 3rja_A Carbohydrate oxidase; p 28.2 28 0.00094 37.1 2.7 54 476-529 403-464 (473)
43 1f0x_A DLDH, D-lactate dehydro 26.4 63 0.0022 35.3 5.3 39 54-100 43-81 (571)
44 1qzp_A Dematin; villin headpie 25.7 29 0.001 26.8 1.7 21 498-518 31-53 (68)
45 1zr6_A Glucooligosaccharide ox 25.6 31 0.0011 36.9 2.6 34 496-529 435-471 (503)
46 1yu8_X Villin; alpha helix, 3- 21.5 30 0.001 26.7 1.0 22 497-518 29-52 (67)
No 1
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1e-39 Score=355.70 Aligned_cols=420 Identities=19% Similarity=0.234 Sum_probs=274.8
Q ss_pred eeccccccccccccC---CCCCHHHHHHHHHHHHhc--CCCCCceeeecCCCceeeccccccccc-CCeEEEEcCCCCCc
Q 008429 44 YLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKER--NPSKDGLVCTARKPWIAVGMRNVDYKR-ARHFEVDLSAFRNI 117 (565)
Q Consensus 44 ~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~--~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~givIdls~l~~i 117 (565)
++.| |..+ ...|. .|.+.++|+++++++++. +. .....|+++++ ++.+. ++|++|||++||+|
T Consensus 32 ~~~~-W~~~-~~~p~~vv~P~s~eev~~~v~~a~~~~~~~--~v~~~G~G~s~-------~~~~~~~~gvvIdl~~l~~i 100 (481)
T 4feh_A 32 RLTG-WGRT-APSVANVLRTPDAEMIVKAVARVAESGGGR--GAIARGLGRSY-------GDNAQNGGGLVIDMTPLNTI 100 (481)
T ss_dssp EECC-TTCC-SCEEEEEEECSCHHHHHHHHHHHHTTTCTT--CEEEECSSCSS-------SSTTCCTTSEEEECTTCCCE
T ss_pred eeec-ccCC-CCCCCEEEeCCCHHHHHHHHHHHHHcCCCc--eEEEEeCCcCC-------CCCCCCcCeEEEECccCCCc
Confidence 5677 5443 34444 799999999999999987 33 22333444443 12222 58999999999999
Q ss_pred eEEeCCCcEEEEcCCCCHHHHHHHHccCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEE
Q 008429 118 LDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVR 197 (565)
Q Consensus 118 l~vd~~~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~ 197 (565)
+++|+++++|+||||+++.+|+++|.++|+++|+.|+...+||||++++++.|..+++||.++|+|+++++|++||++++
T Consensus 101 ~~~d~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~ 180 (481)
T 4feh_A 101 HSIDADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRH 180 (481)
T ss_dssp EEEETTTTEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEE
T ss_pred eEEcCCCCEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEE
Confidence 99999999999999999999999999999999988988999999999876666566899999999999999999999999
Q ss_pred EcCCCCchhhhhhcccccCCCceEEEEEEEEEeccc-eeEEEEecCCCCHHHHHHHHHHHcCCCCCCCCCCCCccceEEE
Q 008429 198 ATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKE-YMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEG 276 (565)
Q Consensus 198 ~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~ 276 (565)
++++.+++||||+++||.|++||||+++|++.|.++ +...... .+.+++++++.+.+.. ......+.
T Consensus 181 ~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~-~~~~l~~~~~~~~~~~-----------~~~~~~~~ 248 (481)
T 4feh_A 181 LTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGD-VTASLDETIALHSDGS-----------EARYTYSS 248 (481)
T ss_dssp ECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEE-ECSSHHHHHHHHSSSG-----------GGGCSEEE
T ss_pred eCCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEE-eCCCHHHHHHHHHHHH-----------hcCCcEEE
Confidence 997547899999999999999999999999999876 3333333 3578998888875431 01244556
Q ss_pred EEec-------CCcEEEEEeecCChHHHhhh--ccccccc---cccccchhhHhHHHhhhcCcccccccccccccccccc
Q 008429 277 MIYT-------STEAVFMTGRYASKEEAKKK--GNVINSV---GWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRS 344 (565)
Q Consensus 277 ~~~~-------~~~~vl~~g~~~~~~~~~~~--~~~~~~~---~~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~ 344 (565)
.|+. .++++++.+.+....+.... ..++... ....+.++ ....+.... .. .+...+++....
T Consensus 249 ~w~d~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~---p~~~l~~~~-~~--~~~~~~~~~~~~ 322 (481)
T 4feh_A 249 AWFDAISAPPKLGRAAVSRGRLATVEQLPAKLRSEPLKFDAPQLLTLPDVF---PNGLANKYT-FG--PIGELWYRKSGT 322 (481)
T ss_dssp EEECCSSCTTSTTCEEEEEEEECCGGGSCGGGGGSTTCCC-----------------------------------CCSCC
T ss_pred EEEeccCCCCCCCeEEEEeCCcCcccccccccccCccccccccccCCCccC---cHHHHhHHH-HH--HHHHHHHhhCcc
Confidence 6663 26789999988654322100 0000000 00000000 000000000 00 000111100000
Q ss_pred eeecccccccCCchhhhhhhhcccCChhhhhHHhhhchhhhhccCCcceee-EEeeccccHHHHHHHHhc----CCCcee
Q 008429 345 LYWEGKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQ-DMLVPLYKVGDALEWQHR----EVYPLW 419 (565)
Q Consensus 345 ~fw~~~~~~p~~~~~~~r~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~viq-Dv~vP~~~l~e~l~~l~~----~~~P~w 419 (565)
....+ +.+ +-++ .|... . ....+++.+.-.+| +++||.+ .+++|+.+.+ ...++.
T Consensus 323 ---~~~~~-----~~~-~~~~---~p~d~----v---~~~nr~yg~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~~~~~ 382 (481)
T 4feh_A 323 ---YRGKV-----QNL-TQFY---HPLDM----F---GEWNRAYGPAGFLQYQFVIPTE-AVDEFKKIIGVIQASGHYSF 382 (481)
T ss_dssp ---EEEEE-----EEH-HHHH---C--------------CHHHHTTTSEEEEEEEEETT-CHHHHHHHHHHHHHTTCCCS
T ss_pred ---ccccc-----ccc-eeee---chhhh----c---cccccccCCCCcEEEEEEeccc-HHHHHHHHHHHHHhcCCCce
Confidence 00000 000 0111 01100 0 00011111212456 8999999 9999999866 566665
Q ss_pred eceeeeecCCCccccCCCCCccCCCCCCCCCCcceeEEEEeecCCCCCCCCCCCchHHHHHHHHHHHHHcCCcccccccc
Q 008429 420 LCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVS 499 (565)
Q Consensus 420 lcP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~g~~~~~~~~~~~~~~~~~r~lE~~v~~~gG~k~lya~~ 499 (565)
+--++....++..||+ .+.+| .++.|| +|-.+ .. .++.++||++|.++||+.++.++.
T Consensus 383 ~~v~~R~~~~d~~~LS-------~~~~~----~tlal~--~~~~~-------~~--~~~~~~le~i~~~~gGRphw~K~~ 440 (481)
T 4feh_A 383 LNVFKLFGPRNQAPLS-------FPIPG----WNICVD--FPIKD-------GL--GKFVSELDRRVLEFGGRLYTAKDS 440 (481)
T ss_dssp CCEEEEECCCCSCTTC-------CCCSE----EEEEEE--EECCT-------TH--HHHHHHHHHHHHHTTCEECGGGCS
T ss_pred EEEEEEEeCCCCccCC-------CCCCc----eEEEEE--ccCCc-------cH--HHHHHHHHHHHHHcCCEecchhcc
Confidence 5444444333334442 22222 245555 44212 11 689999999999999999999999
Q ss_pred cCCHHHHHhhcCh-hHHHHHHHhcCCCCCChhhhhh
Q 008429 500 ELSEKNFWRMFDA-DLYEKCRKKYKAVGTFMSVYYK 534 (565)
Q Consensus 500 ~~~~~eF~~~y~~-~~y~~lR~ky~~~~~~~~~y~k 534 (565)
.++.++|.++|++ +.|.+||+++||+|.|.|.|-+
T Consensus 441 ~~~~~~~~~~YP~~~~F~~lr~~~DP~g~F~n~~~r 476 (481)
T 4feh_A 441 RTTAETFHAMYPRVDEWISVRRKVDPLRVFASDMAR 476 (481)
T ss_dssp SCCHHHHHHHCTTHHHHHHHHHHHCTTCCBCCHHHH
T ss_pred CCCHHHHHHhCcCHHHHHHHHHhhCCccccCCHHHH
Confidence 9999999999998 9999999999999999999876
No 2
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=3.5e-39 Score=347.00 Aligned_cols=394 Identities=15% Similarity=0.161 Sum_probs=266.3
Q ss_pred eeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeeccccccccc--CCeEEEEcCCCCCc
Q 008429 43 IYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKR--ARHFEVDLSAFRNI 117 (565)
Q Consensus 43 ~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~--~~givIdls~l~~i 117 (565)
+.+.| |...+.+.|. .|.+.++|+++++.+ . ....+|++|+ .++.+. .+|++|||++||+|
T Consensus 8 ~~~~~-w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~--~v~~~G~G~s-------~~~~~~~~~~g~vi~l~~l~~i 73 (422)
T 2vfr_A 8 ITVTN-WAGNITYTAKELLRPHSLDALRALVADS----A--RVRVLGSGHS-------FNEIAEPGDGGVLLSLAGLPSV 73 (422)
T ss_dssp CCCBC-SSSSCBCSCSSCBCCSSHHHHHHHHHHC----S--SEEECSSCCC-------CSSTTCCCTTCEEECSTTSCCC
T ss_pred ceeec-CCCCccCCCCEEEeCCCHHHHHHHHHhC----C--CEEEEECCCC-------CCCCccCCCCcEEEEhhhCCCc
Confidence 44567 6665656676 566666666666665 2 2223344332 334443 68999999999999
Q ss_pred eEEeCCCcEEEEcCCCCHHHHHHHHccCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEE
Q 008429 118 LDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVR 197 (565)
Q Consensus 118 l~vd~~~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~ 197 (565)
+++|+++++|+||||+++.+|+++|.++|+.+|..++++.+||||++++|+.| .+.+||.++|+|+++++|++||++++
T Consensus 74 ~~~d~~~~~v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G-~~~~~G~~~d~v~~~~vv~~~G~~~~ 152 (422)
T 2vfr_A 74 VDVDTAARTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHG-SGVGNGSLASVVREVELVTADGSTVV 152 (422)
T ss_dssp EEEETTTTEEEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCC-CCTTCCCGGGGEEEEEEECTTSCEEE
T ss_pred EEEcCCCCEEEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCC-CCcccCcHHHheEEEEEEeCCCCEEE
Confidence 89999999999999999999999999999999866789999999999876665 45799999999999999999999999
Q ss_pred EcCCCCchhhhhhcccccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHH-HHHHHHcCCCCCCCCCCCCccceEEE
Q 008429 198 ATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIA-QAYADSFAPRDGDQDNQAKVPDFVEG 276 (565)
Q Consensus 198 ~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vd~ 276 (565)
++++ +++ ||+++||+|++||||+++||+.|.++.....+. +.++++++ +++.++.. .+..+++
T Consensus 153 ~~~~-~~~--f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------~~~~~e~ 216 (422)
T 2vfr_A 153 IARG-DER--FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT--ELPLAGLDPATFETVMA-----------AAYSVSL 216 (422)
T ss_dssp EETT-STT--GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE--EECSTTCCHHHHHHHHT-----------SSSEEEE
T ss_pred eCCC-CCC--cceEEecCCCCEEEEEEEEEEEecCceEEEEEe--cCCHHHHHHHHHHHHHh-----------cCCcEEE
Confidence 9986 565 899999999999999999999999986654442 23566677 77666531 2477888
Q ss_pred EEecCCc---EEEEEeecCChHHHhhhccccccccccccchhhHhHHHhhhcCccccccccc-ccccccccceeeccccc
Q 008429 277 MIYTSTE---AVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTR-EYYHRHTRSLYWEGKLI 352 (565)
Q Consensus 277 ~~~~~~~---~vl~~g~~~~~~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~~-dy~~r~~r~~fw~~~~~ 352 (565)
++ ...+ +++..+...+.+... . .| . + .+. . ....+|.. .+. +++
T Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~~~---------~----~~--~--~-~~~-~-~~~~~p~~~~~~------~~~----- 264 (422)
T 2vfr_A 217 FT-DWRAPGFRQVWLKRRTDRPLDG---------F----PY--A--A-PAA-E-KMHPVPGMPAVN------CTE----- 264 (422)
T ss_dssp EE-CSSSSSEEEEEEEEETTSCCCC---------C----TT--S--E-ECS-S-CCCSSTTSCGGG------BCC-----
T ss_pred Ee-cCCCceeEEEEecCcCCCCCCC---------c----hH--H--H-HHH-h-hcccCcccChhh------hcc-----
Confidence 87 5433 334444333211000 0 11 0 0 000 0 00001110 110 111
Q ss_pred ccCC-chhhhhhhhcccCChhhhhHHhhhchhhhhccCCcceeeEEeeccccHHHHHHHHhc--C-CCceeeceeeeecC
Q 008429 353 LPFG-DQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHR--E-VYPLWLCPHRLYKL 428 (565)
Q Consensus 353 ~p~~-~~~~~r~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~viqDv~vP~~~l~e~l~~l~~--~-~~P~wlcP~~~~~~ 428 (565)
+.+ ...+.+.+.. . ..+.. -....++.+|++||+++++++|+.+++ . .+|.+ ||+..+..
T Consensus 265 -~~~~~~~~~~~~~~----~---------~~~~~-p~~~~~~~~e~avP~e~~~~~l~~l~~~~~~~~~~~-~~v~~r~~ 328 (422)
T 2vfr_A 265 -QFGVPGPWHERLPH----F---------RAEFT-PSSGAELQSEYLMPREHALAALHAMDAIRETLAPVL-QTCEIRTV 328 (422)
T ss_dssp -CTTCCEEGGGTSSS----B---------CTTCC-CSCCSCEEEEEEEEGGGHHHHHHHHHHTHHHHGGGE-EEEEEEEE
T ss_pred -cCCccccHHHhccc----c---------ccccc-CCcccEEEEEEEEEHHHHHHHHHHHHHHHHhCCCce-eeEEEEee
Confidence 110 0112222110 0 00000 000235667999999999999999998 4 47775 67555432
Q ss_pred -CCccccCCCCCccCCCCCCCCCCcceeEEEEeecCCCCCCCCCCCchHHHHHHHHHHHHHcCCcccccccccCCHHHHH
Q 008429 429 -PYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIENGGFQPQYAVSELSEKNFW 507 (565)
Q Consensus 429 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~g~~~~~~~~~~~~~~~~~r~lE~~v~~~gG~k~lya~~~~~~~eF~ 507 (565)
...++| |+..+ .+.+ ++.+|..++. +.+ .++++++|++|.++||+.++.++.+++.++|+
T Consensus 329 ~~~~~~L--------s~~~~---r~~~--~l~~~~~~~~----~~~--~~~~~~~~~lv~~~gG~~~wgk~~~~~~~~~~ 389 (422)
T 2vfr_A 329 AADAQWL--------SPAYG---RDTV--AAHFTWVEDT----AAV--LPVVRRLEEALVPFAARPHWGKVFTVPAGELR 389 (422)
T ss_dssp CCBCSTT--------CTTBT---SCEE--EEEEEECSCH----HHH--HHHHHHHHHHHGGGTCEECTTSCCCCCHHHHH
T ss_pred cCCcccc--------CCCCC---CCeE--EEEEecCCCc----hhH--HHHHHHHHHHHHHcCCcccccccCCCCHHHHH
Confidence 222233 22111 1244 7777752211 112 47999999999999999999999999999999
Q ss_pred hhcCh-hHHHHHHHhcCCCCCChhhhhh
Q 008429 508 RMFDA-DLYEKCRKKYKAVGTFMSVYYK 534 (565)
Q Consensus 508 ~~y~~-~~y~~lR~ky~~~~~~~~~y~k 534 (565)
+||++ +.|.++|++|||++.|.|.|.|
T Consensus 390 ~~Yp~~~~f~~vk~~~DP~g~f~n~~~~ 417 (422)
T 2vfr_A 390 ALYPRLADFGALAGALDPAGKFTNAFVR 417 (422)
T ss_dssp TTCTTHHHHHHHHHHHCTTCTTCCHHHH
T ss_pred HHCcCHHHHHHHHHHhCCCCccCCHHHH
Confidence 99997 8999999999999999999987
No 3
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=5.5e-34 Score=311.62 Aligned_cols=428 Identities=13% Similarity=0.081 Sum_probs=271.2
Q ss_pred eccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeEEEEcC-CCCCceEE
Q 008429 45 LGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLS-AFRNILDI 120 (565)
Q Consensus 45 ~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls-~l~~il~v 120 (565)
++| |+....+.|. .|.+.++|+++++++++++. ...++|++|++..+....+ .+..+|++|||+ +||+| ++
T Consensus 19 ~~n-Ws~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~--pv~v~GgGhs~~~l~~~gG-~~~~~GVvIdls~~Ln~I-~v 93 (540)
T 3js8_A 19 FKN-WAGDIKVDDVWTCAPRSADEVVKVANWAKDNGY--KVRARGMMHNWSPLTLAAG-VSCPAVVLLDTTRYLTAM-SI 93 (540)
T ss_dssp EEC-TTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTC--EEEEECSCCCSSCSSCCTT-CSSCSEEEEETTTTCCCE-EE
T ss_pred eec-cccccCCCccEEEEcCCHHHHHHHHHHHHHcCC--eEEEEeCCCCcccccccCC-CCCCCeEEEECcCcCCCE-EE
Confidence 567 7665555665 89999999999999999885 3444566665532211111 123578999996 69999 99
Q ss_pred eCC--CcEEEEcCCCCHHHHHHHHccCCceeeeecCCCccchhchhcccCCCCC----------CcccccccceeeEEEE
Q 008429 121 DKD--RMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGS----------SHIYGLFSDTVVAYEI 188 (565)
Q Consensus 121 d~~--~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~----------s~~~G~~~d~V~~~ev 188 (565)
|++ +++|+||||+++.+|+++|.++|+.++..|+++.+||||++++|+.|.. +.+||.++|+|++++|
T Consensus 94 D~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~lev 173 (540)
T 3js8_A 94 DASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTA 173 (540)
T ss_dssp ECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEE
T ss_pred CCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEE
Confidence 985 5899999999999999999999999998888888999999976555543 5799999999999999
Q ss_pred EecCce-----EEEEcCCCCchhhhhhcccccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHH-------HHHHH
Q 008429 189 VLADGQ-----VVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQ-------AYADS 256 (565)
Q Consensus 189 VladG~-----vv~~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 256 (565)
|++||+ ++++++ +++||+++ ++|.|+ ||||+++||++|.+......+.. -+++++++ .+.++
T Consensus 174 V~adG~~~~~~i~~~s~--~~~DL~a~-r~G~G~-gIVTevtlrl~P~~~l~~~~~~~--~~~~e~l~~~~~~~~~~~~~ 247 (540)
T 3js8_A 174 VVYDKASGAYALRKFAR--NDPQIAPL-LAHVGR-SLIVEATLQAAPNQRLRCQSWFN--IPYGEMFAAAGSGGRTFASY 247 (540)
T ss_dssp EEEETTTTEEEEEEEET--TSGGGHHH-HTCTTS-SCEEEEEEEEEECCEEEEEEECC--SCHHHHTCCSSCCSSCHHHH
T ss_pred EcCCCCCceeeEEEeCC--CChhHHHH-HhcCCC-eEEEEEEEEEEECCceEEEEEec--CCHHHHHhhcccccccHHHH
Confidence 999998 888876 58998554 555577 69999999999999866555431 24666654 34443
Q ss_pred cCCCCCCCCCCCCccceEEEEEecCCcEEEEEeecCCh-HHHhhhccccccccccccchhhHhHHHhhhcCccccccccc
Q 008429 257 FAPRDGDQDNQAKVPDFVEGMIYTSTEAVFMTGRYASK-EEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTR 335 (565)
Q Consensus 257 ~~~~~~~~~~~~~~~~~vd~~~~~~~~~vl~~g~~~~~-~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~~ 335 (565)
. ...++++++||+..+.+.+.-...+. .+... ..+. ..+.-+|....... +.
T Consensus 248 ~-----------~~~~~~e~~WfP~t~~~~~k~~~~~~~~p~~~--~~~~---~p~~~~~~d~l~~~-----------~~ 300 (540)
T 3js8_A 248 L-----------DSAGRVEAIWFPFTSNPWLKVWTVTPNKPLFS--RQTD---KPFNYPFSDNLPDE-----------VT 300 (540)
T ss_dssp H-----------HHTSEEEEEECTTCSSCEEEEEEECSSCCTTC--EECS---SSCCCHHHHSCCHH-----------HH
T ss_pred H-----------hccCeEEEEEECCCCceEEEEccCCCCCCCcc--cccc---CCcccccccccchH-----------HH
Confidence 2 12589999999876654333322221 11100 0000 01111111100000 00
Q ss_pred ccccccccceeecccccccCCchhhhhhhhcccC-----Ch---hh--hh--HHhhhchhhhhccCCcceeeEEee--cc
Q 008429 336 EYYHRHTRSLYWEGKLILPFGDQFWFRFLFGWMM-----PP---KV--SL--LKATQGEAIRNYYHQNHVIQDMLV--PL 401 (565)
Q Consensus 336 dy~~r~~r~~fw~~~~~~p~~~~~~~r~l~~~l~-----~~---~~--~~--~~~~~~~~i~~~~~~~~viqDv~v--P~ 401 (565)
+.+-+..-..+ |.- .+.+..+...+. .+ .+ +. ++....+. . -++.....+| |.
T Consensus 301 ~~~~~~~~~~~-------p~~-~p~~~~~~~~~~~~~~~~~~~~d~~g~s~~~~~~~~~~--~---~r~~~~eyav~~p~ 367 (540)
T 3js8_A 301 DLANKILSLGD-------GKL-TPAFGKAQFAAASAGLVATASWDLWGWSKNLLLYVKPT--T---LRVTANGYAVLTRR 367 (540)
T ss_dssp HHHHHHHTSCC-------GGG-HHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCCTT--S---CCCEEBCEEEEECG
T ss_pred HHHHHHhhcCC-------ccc-chhHHhHHHHhhhccccccccccccccccceEEEecCc--c---ceeEeeEEeecCcH
Confidence 00000000000 000 011111100000 00 00 00 11111111 0 1133458999 99
Q ss_pred ccHHHHHHHHhc------------CCCceeeceeeeecCC-Ccccc-----CCCCCccCCCCCCCCCC----cceeEEEE
Q 008429 402 YKVGDALEWQHR------------EVYPLWLCPHRLYKLP-YKTMV-----YPEPGFEHHRRQGDTSY----AQMYTDVG 459 (565)
Q Consensus 402 ~~l~e~l~~l~~------------~~~P~wlcP~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~n~g 459 (565)
++++++|+.|.+ +.+|+ .+|+-.|..+ +..|+ .+.|. +++..+.++. ..+|||+-
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~pvEvR~~~~D~~~~~~~~~~~~p~--LS~~~~r~~~p~~d~~~~i~~~ 444 (540)
T 3js8_A 368 ENVQRVLNEFVTFYQARVQAYQQQGRYPM-NGPVEIRVTGLDDPSEAALSGGVAPA--LSAIRPRPDHPEWNVAVWLDIL 444 (540)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHTTCCCC-CSCEEEEEECCCCGGGSSSTTCCCCT--TCTTCCCTTCTTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCccc-ccceEEEEecCCchhhccccccCCcc--cCccCCCCCCCCcceEEEEEee
Confidence 999999988774 57777 6898888654 22331 11121 2222221111 28899999
Q ss_pred eecCCCCCCCCCCCchHHHHHHHHHHHHH-cCC-----c-----cccccc--ccCCHHHHHhh----c-------Ch-hH
Q 008429 460 VYYAPGPILRGEVFDGAEAVRKMEQWLIE-NGG-----F-----QPQYAV--SELSEKNFWRM----F-------DA-DL 514 (565)
Q Consensus 460 ~~g~~~~~~~~~~~~~~~~~r~lE~~v~~-~gG-----~-----k~lya~--~~~~~~eF~~~----y-------~~-~~ 514 (565)
.|. +- .+ ..++.|++|+++.+ +|| | -|-|.. .+.+.++|.++ | ++ +.
T Consensus 445 ~~~--~~-----p~-~~~~~~~~E~~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~ 516 (540)
T 3js8_A 445 TLP--GT-----PY-ANQFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDA 516 (540)
T ss_dssp ECT--TC-----TT-HHHHHHHHHHHHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHH
T ss_pred ecC--CC-----cc-HHHHHHHHHHHHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHH
Confidence 985 21 12 12699999999999 999 4 467776 77899999999 9 76 99
Q ss_pred HHHHHHhcCCCCCChhhhhh
Q 008429 515 YEKCRKKYKAVGTFMSVYYK 534 (565)
Q Consensus 515 y~~lR~ky~~~~~~~~~y~k 534 (565)
|.++|++|||++.|.|-|-.
T Consensus 517 ~~~~~~~~DP~~~F~n~~l~ 536 (540)
T 3js8_A 517 AKAALAAYDPYRLFSSPLLD 536 (540)
T ss_dssp HHHHHHHHCTTCCSCCHHHH
T ss_pred HHHHHHhcCCCcccCCHHHH
Confidence 99999999999999988754
No 4
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=3.2e-33 Score=308.03 Aligned_cols=393 Identities=15% Similarity=0.207 Sum_probs=253.6
Q ss_pred CCCCHHHHHHHHHHHHh-cCCCCCceeeecCCCceeeccccccccc-CCeEEEEcCCCCCceEEeC-----CC--cEEEE
Q 008429 59 QKEHDENVKKVVKRLKE-RNPSKDGLVCTARKPWIAVGMRNVDYKR-ARHFEVDLSAFRNILDIDK-----DR--MIAKV 129 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~givIdls~l~~il~vd~-----~~--~~v~V 129 (565)
.|.+.++|++++++|++ ++. ....+|+++++. | .+. .+||+|||++||+| ++|. ++ .+|+|
T Consensus 67 ~P~s~eeV~~iv~~a~~~~~~--~v~~~GgGts~~--g-----~~~~~~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v 136 (524)
T 2exr_A 67 RPVGPEDIAGAVKAALRSDKL--TVAARGNGHSIN--G-----QAMAEGGLVVDMSTTAEN-HFEVGYLSGGDATAFVDV 136 (524)
T ss_dssp ECSSHHHHHHHHHHHHHSSSC--CEEEESSSCCSS--S-----TTCCTTSEEEEGGGGTTS-CEEEEECCSSSSSEEEEE
T ss_pred ecCCHHHHHHHHHHHHhhcCc--eEEEECCCcCCC--C-----cccCCCEEEEECcCCCCc-EEeecccCCCCCceEEEE
Confidence 79999999999999995 664 223334444332 2 222 27999999999999 8876 55 79999
Q ss_pred cCCCCHHHHHHH-HccCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEEEcCCCCchhhh
Q 008429 130 EPLVNMGQISRA-TCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLF 208 (565)
Q Consensus 130 e~Gv~~~~L~~~-l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~~s~~~~~~dLf 208 (565)
|||+++.++.+. +.++|++++..++++.+||||+++++|.|+.+.+||.++|+|++++||++||++++++.. +++|||
T Consensus 137 ~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~-~~~dL~ 215 (524)
T 2exr_A 137 SGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEI-ENSELF 215 (524)
T ss_dssp ETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESS-SSHHHH
T ss_pred eCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCC-CChhHH
Confidence 999999998555 559999955444678899999999888899999999999999999999999999999986 899999
Q ss_pred hhcccccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHcCCCCCCCCCCCCccceEEEEEecCC------
Q 008429 209 YAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIYTST------ 282 (565)
Q Consensus 209 ~a~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~------ 282 (565)
|+++||+|+|||||+++|||.|.|+....... .|.+++++.+++..+...... ...+++|.......
T Consensus 216 ~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~-~f~~~~~~~~~~~~l~~~~~~------~~~e~~d~~~~~~~~~~~~~ 288 (524)
T 2exr_A 216 FSVLGGLGQFGIITRARVLLQPAPDMVRWIRV-VYTEFDEFTQDAEWLVSQKNE------SSFDYVEGFVFVNGADPVNG 288 (524)
T ss_dssp HHHTTCTTSSEEEEEEEEEEEECCSEEEEEEE-EESCHHHHHHHHHHHHTSCTT------SSCSEEEEEEEESSCCTTTS
T ss_pred hHhhcCCCccEEEEEEEEEEEEcCCeeEEEEE-EeCCHHHHHHHHHHHHHcCCc------chhHhhchhhhhcchhhhhh
Confidence 99999999999999999999999985543322 356788888888776532110 12355555422111
Q ss_pred ----------------------cEEEEEee-----cC-ChHHHhhhccccccccccccchhhHhHHHhhhcCcccccccc
Q 008429 283 ----------------------EAVFMTGR-----YA-SKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPT 334 (565)
Q Consensus 283 ----------------------~~vl~~g~-----~~-~~~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~ 334 (565)
.++++... .. +.++.+. ..+..
T Consensus 289 ~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~~~v~~------------------~~~~~------------ 338 (524)
T 2exr_A 289 WPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDK------------------RVERL------------ 338 (524)
T ss_dssp GGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCHHHHHH------------------HHHHH------------
T ss_pred hhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCHHHHHH------------------HHHHH------------
Confidence 12222211 11 1111100 00000
Q ss_pred cccccccccceeecccccccCCchhhhhhhhcccCChhhhhHHhhhchhhhhccCCcceeeEEeeccccHHHHHHHHhc-
Q 008429 335 REYYHRHTRSLYWEGKLILPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHR- 413 (565)
Q Consensus 335 ~dy~~r~~r~~fw~~~~~~p~~~~~~~r~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~viqDv~vP~~~l~e~l~~l~~- 413 (565)
.+.+ +...+...... .....+..+ . ....|..|.....++. .. ..|++||+++++++++.+.+
T Consensus 339 ~~~l-~~~~~~~~~~~-------~~~~~~~~~-~-~~~~W~~R~~~~~a~~----~~--~~Dv~VP~s~l~~~~~~v~~~ 402 (524)
T 2exr_A 339 IGRL-RFNEGLRFEVD-------LPYVDFLLR-V-KRSEEIAKENGTWETP----HP--WLNLFVSKRDIGDFNRTVFKE 402 (524)
T ss_dssp HTTC-CCCTTCEEEEE-------EEHHHHHTT-T-HHHHHHHHHTTCSSSC----CC--CEEEEEEHHHHHHHHHHCCCC
T ss_pred HHHH-HhCCCeEeecc-------cchhhhhhh-h-hhHHHHhhhhcccccC----CC--eeEEEECHHHHHHHHHHHHHH
Confidence 0000 00000000000 000000000 0 0111444444333332 11 23999999999999999876
Q ss_pred -----CCCceeeceeeeecCCCccccCCCCCccCCCCCCCCCCcceeEEEEeecCCCCCCCC-CCCc-hHHHHHHHHHHH
Q 008429 414 -----EVYPLWLCPHRLYKLPYKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRG-EVFD-GAEAVRKMEQWL 486 (565)
Q Consensus 414 -----~~~P~wlcP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~g~~~~~~~~-~~~~-~~~~~r~lE~~v 486 (565)
+..|+++||+.... +.. ... ... ..| .++|..++++....+ ... .... -.+.|++|.+..
T Consensus 403 ~~gdgn~h~~i~~~~~~~~-----~~~-r~~-~~~-~~g----~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~ 469 (524)
T 2exr_A 403 LVKNGVNGPMLVYPLLRSR-----WDD-RTS-VVI-PEE----GEIFYIVALLRFVPP-CAKVSSVEKMVAQNQEIVHWC 469 (524)
T ss_dssp CTTTCCSSCEEEEEEEGGG-----SCT-TSS-CCC-CSS----CSEEEEEEECCCCCT-TSCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCcceEEEEeCCchH-----HHh-HHH-hhC-CCC----ccEEEEEEEeccCCC-cccchHHHHHHHHHHHHHHHH
Confidence 45899999986432 110 000 001 112 257888888652111 000 0111 135888999999
Q ss_pred HHcCCcccccccccCCHHHHHhhcCh--hHHHHHHHhcCCCCCC
Q 008429 487 IENGGFQPQYAVSELSEKNFWRMFDA--DLYEKCRKKYKAVGTF 528 (565)
Q Consensus 487 ~~~gG~k~lya~~~~~~~eF~~~y~~--~~y~~lR~ky~~~~~~ 528 (565)
+..|+.|.-|-..|.++++|.+.|+. +.+.++|++|||++.|
T Consensus 470 ~~~G~~~~~yl~~~~~~~~w~~~~G~~~~~m~~iK~~~DP~~iL 513 (524)
T 2exr_A 470 VKNGIDYKLYLPHYKSQEEWIRHFGNRWSRFVDRKAMFDPMAIL 513 (524)
T ss_dssp HHTTCCEEESSCCCCSHHHHHHHHGGGHHHHHHHHHHHCTTCCB
T ss_pred HHcCCccEEeecCCCCHHHHHHHhhhHHHHHHHHHhhcCchhhc
Confidence 99999988888888899999888864 7799999999999754
No 5
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=4.3e-33 Score=309.27 Aligned_cols=453 Identities=12% Similarity=0.061 Sum_probs=277.0
Q ss_pred EecC-CCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCe
Q 008429 31 VVLP-ISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARH 106 (565)
Q Consensus 31 ~~lp-~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g 106 (565)
+++| .+..|..+ ..| |+....+.|. .|.+.++|+++++++++.+. ...++|++|++..+... ++....+|
T Consensus 12 ~~~p~~~~~y~~~--~~~-w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~--~v~~~G~G~s~~~~~l~-~~~~~~~g 85 (561)
T 2i0k_A 12 PNFPNDIALFQQA--YQN-WSKEIMLDATWVCSPKTPQDVVRLANWAHEHDY--KIRPRGAMAGWTPLTVE-KGANVEKV 85 (561)
T ss_dssp TTCCTTSCCEEEE--EEC-TTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTC--EEEEECCCCCCCTTSSC-TTCCCTTE
T ss_pred eecCCCCHhHHHH--Hhh-hhhccCCCCCEEEecCCHHHHHHHHHHHHHCCC--cEEEECCCCCccccccc-CCCcCCCe
Confidence 4557 89999874 567 6544445554 89999999999999999874 34455666655211111 01112378
Q ss_pred EEEEc-CCCCCceEEeC--CCcEEEEcCCCCHHHHHHHHccCCceeeeecCCCccchhchhcccCCCCC----------C
Q 008429 107 FEVDL-SAFRNILDIDK--DRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGS----------S 173 (565)
Q Consensus 107 ivIdl-s~l~~il~vd~--~~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~----------s 173 (565)
++||| ++||+| ++|+ ++++|+||||+++.+|+++|.++|+.+|+.|+.+.+||||++++|+.|.. +
T Consensus 86 vvIdl~~~l~~i-~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~ 164 (561)
T 2i0k_A 86 ILADTMTHLNGI-TVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPG 164 (561)
T ss_dssp EEEECTTTSCCE-EEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTT
T ss_pred EEEechhhCCce-EecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCcccccc
Confidence 99999 899998 9998 78999999999999999999999999999999999999999965554443 6
Q ss_pred cccccccceeeEEEEEecCce---EEEEcCCCCchhhhhhcccccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHH
Q 008429 174 HIYGLFSDTVVAYEIVLADGQ---VVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIA 250 (565)
Q Consensus 174 ~~~G~~~d~V~~~evVladG~---vv~~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~ 250 (565)
++||.++|+|+++++|++||+ +++++++ ++||+|+++|. |. ||||+++||+.|.++.....+.. + ++++++
T Consensus 165 ~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~--~~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~-~-~~~~~l 238 (561)
T 2i0k_A 165 HTYGSLSNLVTELTAVVWNGTTYALETYQRN--DPRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTD-I-PWRELF 238 (561)
T ss_dssp CCSSCGGGGEEEEEEEEECSSSEEEEEEETT--SGGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECC-S-CHHHHT
T ss_pred cccccHhheEEEEEEEeCCCCEEEeeeccCC--CccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEc-c-CHHHHH
Confidence 789999999999999999999 8888874 78999988844 55 99999999999999876655542 2 366665
Q ss_pred HH-------HHHHcCCCCCCCCCCCCccceEEEEEecCCcEEEE-EeecCChHHHh--------hhc----ccccc--cc
Q 008429 251 QA-------YADSFAPRDGDQDNQAKVPDFVEGMIYTSTEAVFM-TGRYASKEEAK--------KKG----NVINS--VG 308 (565)
Q Consensus 251 ~~-------~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~vl~-~g~~~~~~~~~--------~~~----~~~~~--~~ 308 (565)
+. +.++. ...++++.++++..+.+++ +-......... ... .+... ..
T Consensus 239 ~~~~~~~~~~~~~~-----------~~~~~~e~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 307 (561)
T 2i0k_A 239 APKGADGRTFEKFV-----------AESGGAEAIWYPFTEKPWMKVWTVSPTKPDSSNEVGSLGSAGSLVGKPPQAREVS 307 (561)
T ss_dssp CCTTCSSSCHHHHH-----------HHHSEEEEEECTTCSCCEEEEEEEC--------------------CCCTTSEECS
T ss_pred HHHhcccccHHHHH-----------hcCCceEEEEccCCCeEEEEEEeCCCCCccccccccccccccccccCCccccccc
Confidence 54 22221 1146888888886543332 22222111000 000 00000 10
Q ss_pred ccccchhhHhHHHhhhcCcccccccccccccccccceeecccccccCCchhhhhhhhc---ccCChh--hhhHHhhhchh
Q 008429 309 WWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLILPFGDQFWFRFLFG---WMMPPK--VSLLKATQGEA 383 (565)
Q Consensus 309 ~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~~fw~~~~~~p~~~~~~~r~l~~---~l~~~~--~~~~~~~~~~~ 383 (565)
.++...+....... +.+.+.+..+ .++. +.|.-+...++.... .+.+.. -+.++.++...
T Consensus 308 ~p~~~~~~~~~~~~-----------~~~~l~~~~~-~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 372 (561)
T 2i0k_A 308 GPYNYIFSDNLPEP-----------ITDMIGAINA-GNPG---IAPLFGPAMYEITKLGLAATNANDIWGWSKDVQFYIK 372 (561)
T ss_dssp SSCCCHHHHSCCHH-----------HHHHHHHHHT-TCGG---GHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCC
T ss_pred ccccchhhhhhhHH-----------HHHHHHHHhc-cCcc---cchHHHHHHHHhhccccccccCcceEeechHhheeec
Confidence 00010000000000 0000000000 0000 001000000010000 000000 01122211110
Q ss_pred hhhccCCcceeeEEee--ccccHHHHHHHHhc----C--------CCceeeceeeeecC-CCccccCCCCCcc------C
Q 008429 384 IRNYYHQNHVIQDMLV--PLYKVGDALEWQHR----E--------VYPLWLCPHRLYKL-PYKTMVYPEPGFE------H 442 (565)
Q Consensus 384 i~~~~~~~~viqDv~v--P~~~l~e~l~~l~~----~--------~~P~wlcP~~~~~~-~~~~~~~~~~~~~------~ 442 (565)
-+ .-.+....++| |+++++++|+.+.+ . .+|+. .|+-.|.. ++..+|.+-+... +
T Consensus 373 ~~---~~~f~~~e~av~~P~~~~~~~l~~l~~~i~~~~~~~~~~~~~~~~-~pve~R~~~~d~~~L~~~~~~~~~~lS~~ 448 (561)
T 2i0k_A 373 AT---TLRLTEGGGAVVTSRANIATVINDFTEWFHERIEFYRAKGEFPLN-GPVEIRCCGLDQAADVKVPSVGPPTISAT 448 (561)
T ss_dssp TT---SCCCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHHHTTCCCCC-SCEEEEEEECCCGGGCCSCCSCSCSSCTT
T ss_pred CC---CceEEEEEEEEcCcHHHHHHHHHHHHHHHHhchhhhhhcCCceee-ccEEEEEecCchhhhccccccCCcccccc
Confidence 00 01144558999 99999999988876 2 56765 44444433 4445553311110 1
Q ss_pred CCCCCCCCCc-ceeEEEEeecCCCCCCCCCCCchHHHHHHHHHHHHH-cCC-----cccccccccCCHH------HHH--
Q 008429 443 HRRQGDTSYA-QMYTDVGVYYAPGPILRGEVFDGAEAVRKMEQWLIE-NGG-----FQPQYAVSELSEK------NFW-- 507 (565)
Q Consensus 443 ~~~~~~~~~~-~~~~n~g~~g~~~~~~~~~~~~~~~~~r~lE~~v~~-~gG-----~k~lya~~~~~~~------eF~-- 507 (565)
.|.+|..+-+ ++||||-.|. +.+ +. .++.+++|+++.+ .|| +.+.-++..++.+ +|.
T Consensus 449 ~p~~g~~~~~~t~~id~~~y~-~~~------~~-~~~~~~~e~i~~~~~gG~~~~~RphWaK~~~~~~~~~~~~~~~~~~ 520 (561)
T 2i0k_A 449 RPRPDHPDWDVAIWLNVLGVP-GTP------GM-FEFYREMEQWMRSHYNNDDATFRPEWSKGWAFGPDPYTDNDIVTNK 520 (561)
T ss_dssp CCCTTCTTCCEEEEEEEEECT-TCT------TH-HHHHHHHHHHHHHHSBSSSEEEECCTTSCCSCSSSTTCCHHHHHTH
T ss_pred cCCCCCCCCCeEEEEEEEecC-CCC------cH-HHHHHHHHHHHHHhcCCCcCCCCCcccccCCccccccccHHHHHHH
Confidence 1334422225 8999999885 322 21 2689999999999 999 9988888877766 999
Q ss_pred --hhc-------Ch-hHHHHHHHhcCCCCCChhhhhh
Q 008429 508 --RMF-------DA-DLYEKCRKKYKAVGTFMSVYYK 534 (565)
Q Consensus 508 --~~y-------~~-~~y~~lR~ky~~~~~~~~~y~k 534 (565)
+.| ++ +.|.++|+++||++.|.|-|-+
T Consensus 521 y~~~Yg~~~~~~p~~~~f~~~r~~~DP~g~F~n~~~~ 557 (561)
T 2i0k_A 521 MRATYIEGVPTTENWDTARARYNQIDPHRVFTNGFMD 557 (561)
T ss_dssp HHHHTTTTSCTTSSHHHHHHHHHHHCTTCCSCCHHHH
T ss_pred HHhhhccccCCCCCHHHHHHHHHhcCCCCccCCHHHH
Confidence 556 76 8999999999999999998854
No 6
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8.1e-32 Score=293.32 Aligned_cols=379 Identities=16% Similarity=0.149 Sum_probs=247.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeeccccccc----ccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCC
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDY----KRARHFEVDLSAFRNILDIDKDRMIAKVEPLVN 134 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~----~~~~givIdls~l~~il~vd~~~~~v~Ve~Gv~ 134 (565)
.|.+.++|++++++|++++. |+.+.|+|+|.. +..+|++|||++||+|+++|+++.+++||||++
T Consensus 57 ~P~s~eeV~~~v~~a~~~~~-----------pv~~~GgGt~~~g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~ 125 (476)
T 3pm9_A 57 RPGSTEEVVAICKLANEARV-----------ALVPQGGNTGLVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAI 125 (476)
T ss_dssp CCCSHHHHHHHHHHHHHHTC-----------CEEEESSSCCSSSTTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred ecCCHHHHHHHHHHHHHcCC-----------eEEEEeCCCCCCCCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcC
Confidence 79999999999999999885 444444443322 124699999999999999999999999999999
Q ss_pred HHHHHHHHccCCceeeeec-CCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEEEcC----CCCchhhhh
Q 008429 135 MGQISRATCPMNLSLAVVA-ELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK----DNEYKDLFY 209 (565)
Q Consensus 135 ~~~L~~~l~~~Gl~~pv~p-~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~~s~----~~~~~dLf~ 209 (565)
+.+|+++|.++|+.+|+.| +...+||||++++++.|..+.+||.++|+|+++++|++||++++++. ++.++||+|
T Consensus 126 ~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~ 205 (476)
T 3pm9_A 126 LQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRD 205 (476)
T ss_dssp HHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHH
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCcCHHH
Confidence 9999999999999988776 46689999999777777778999999999999999999999998753 346789999
Q ss_pred hcccccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHcCCCCCCCCCCCCccceEEEEEecCC-------
Q 008429 210 AIPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSFAPRDGDQDNQAKVPDFVEGMIYTST------- 282 (565)
Q Consensus 210 a~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~------- 282 (565)
+++||+|+|||||+++||++|.++.....+. .+.+++++++++.++... ....+..+|+++....
T Consensus 206 l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~-~~~~~~~a~~~~~~~~~~-------~g~~p~a~El~d~~~~~~~~~~~ 277 (476)
T 3pm9_A 206 LFIGAEGTLGIITAATLKLFPKPRAVETAFV-GLQSPDDALKLLGIAQGE-------AAGNLTSFELIAETPLDFSVRHA 277 (476)
T ss_dssp HHTTSTTSSCEEEEEEEECEECCSEEEEEEE-EESCHHHHHHHHHHHHHH-------HGGGEEEEEEEEHHHHHHHHHHT
T ss_pred HhccCCCCcEEEEEEEEEEeecCceeEEEEE-EcCCHHHHHHHHHHHHHh-------cCCCceEEEecCHHHHHHHHhcc
Confidence 9999999999999999999999986554443 467899988888776310 0113556666643210
Q ss_pred ----------cEEEEEeecCChHHHhhhccccccccccccchhhHhHHHhhhcCcccccccccccccccccceeeccccc
Q 008429 283 ----------EAVFMTGRYASKEEAKKKGNVINSVGWWFKPWFYQHAATALKRGEFTEYIPTREYYHRHTRSLYWEGKLI 352 (565)
Q Consensus 283 ----------~~vl~~g~~~~~~~~~~~~~~~~~~~~~~~p~fy~~~~~~~~~~~~~e~~p~~dy~~r~~r~~fw~~~~~ 352 (565)
..+++....++.++.... +....+.....+...+ ..+.
T Consensus 278 ~~~~~~~~~~~~~llve~~g~~~~~~~~--------------~~~~~~~~~~~g~~~~--------------~~~a---- 325 (476)
T 3pm9_A 278 NNRDPLEARYPWYVLIELSSPRDDARAA--------------LESILERGFEDGIVVD--------------AAIA---- 325 (476)
T ss_dssp TCCCCSSSCCSEEEEEEEEESSSCHHHH--------------HHHHHHHHHHTTCCCE--------------EEEC----
T ss_pred CCCCCCCccCCeEEEEEEccCcHHHHHH--------------HHHHHHHHHhcCCCcc--------------eEEe----
Confidence 122332222111111000 0000000000000000 0000
Q ss_pred ccCCchhhhhhhhcccCChhhhhHHhhhchhhhhccCCcceeeEEeeccccHHHHHHHHhc---CCCceeeceeeeecCC
Q 008429 353 LPFGDQFWFRFLFGWMMPPKVSLLKATQGEAIRNYYHQNHVIQDMLVPLYKVGDALEWQHR---EVYPLWLCPHRLYKLP 429 (565)
Q Consensus 353 ~p~~~~~~~r~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~viqDv~vP~~~l~e~l~~l~~---~~~P~wlcP~~~~~~~ 429 (565)
.+ .-...++|.+|.....++++... .+++|++||+++++++++.+++ ..+|-.-+.+-.
T Consensus 326 --~~----------~~~~~~lW~~R~~~~~~~~~~g~--~~~~Dv~vP~~~l~~~~~~~~~~~~~~~~~~~~~~~g---- 387 (476)
T 3pm9_A 326 --NS----------VQQQQAFWKLREEISPAQKPEGG--SIKHDISVPVAAVPQFIEQANAAVVALIPGARPVPFG---- 387 (476)
T ss_dssp --CS----------HHHHHHHHHHHHTHHHHTGGGCC--EECCEEECCGGGHHHHHHHHHHHHHHHSTTCEEEEEE----
T ss_pred --CC----------HHHHHHHHHHHHHHHHHHhhcCC--ceeEEEEeeHHHHHHHHHHHHHHHHHhcCCCeEEEEE----
Confidence 00 00113456666665555554432 5789999999999999999998 444422222211
Q ss_pred CccccCCCCCccCCCCCCCCCCcceeEEEEeecCCCCCCCCCCC--chHHHHHHHHHHHHHcCCcccccc-cccCCHHHH
Q 008429 430 YKTMVYPEPGFEHHRRQGDTSYAQMYTDVGVYYAPGPILRGEVF--DGAEAVRKMEQWLIENGGFQPQYA-VSELSEKNF 506 (565)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~g~~~~~~~~~~~--~~~~~~r~lE~~v~~~gG~k~lya-~~~~~~~eF 506 (565)
|...| .+++|+-.- +.. +. +.+ ...+.++++=+.+.++||-=+-=- .=..-++-+
T Consensus 388 -------------H~gdG-----nlH~~i~~~--~~~-~~-~~~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l 445 (476)
T 3pm9_A 388 -------------HLGDG-----NIHYNVSQP--VGA-DK-AEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDEL 445 (476)
T ss_dssp -------------EGGGT-----EEEEEEECC--TTC-CH-HHHHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHH
T ss_pred -------------EeCCC-----ceEEEEecC--CcC-Ch-HHHHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHH
Confidence 11122 566676531 111 00 110 113567778888999999633211 222234444
Q ss_pred HhhcCh---hHHHHHHHhcCCCCCC
Q 008429 507 WRMFDA---DLYEKCRKKYKAVGTF 528 (565)
Q Consensus 507 ~~~y~~---~~y~~lR~ky~~~~~~ 528 (565)
..+++. +..+++|+.+||++.|
T Consensus 446 ~~~~~~~~~~~m~~iK~~~DP~~il 470 (476)
T 3pm9_A 446 AEVKDKTAIELMRSIKALLDPHGIM 470 (476)
T ss_dssp HHHSCHHHHHHHHHHHHHHCTTSCB
T ss_pred HHhcCHHHHHHHHHHHHHhCcccCC
Confidence 677774 6778999999999855
No 7
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=9.2e-32 Score=303.89 Aligned_cols=194 Identities=22% Similarity=0.200 Sum_probs=163.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccc-cccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVD-YKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQ 137 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~ 137 (565)
.|.+.++|++|+++|++++. ..+.+|+++++. |+.... .....+|+|||++||+|++||+++.+++|||||++.+
T Consensus 211 ~P~s~eeV~~iv~~A~~~~i--pVvprGgGTsl~--GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~ 286 (658)
T 4bby_A 211 WPTCHDDVVKIVNLACKYNL--CIIPIGGGTSVS--YGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQE 286 (658)
T ss_dssp ECCSHHHHHHHHHHHHHTTC--EEEEESSCCCSS--STTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred eeCCHHHHHHHHHHHHHCCC--eEEEECCCcCCC--CCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHH
Confidence 79999999999999999985 333445544332 111110 0124679999999999999999999999999999999
Q ss_pred HHHHHccCCceeeeec-CCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEEEcC---CCCchhhhhhccc
Q 008429 138 ISRATCPMNLSLAVVA-ELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK---DNEYKDLFYAIPW 213 (565)
Q Consensus 138 L~~~l~~~Gl~~pv~p-~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~~s~---~~~~~dLf~a~~G 213 (565)
|+++|.++|+++|++| +...+||||++++++.|..+.+||.+.|+|+++|||++||++++.++ .+.++||+++++|
T Consensus 287 L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aGyDL~~L~iG 366 (658)
T 4bby_A 287 LERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTGPDIHHFIMG 366 (658)
T ss_dssp HHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSSSCTHHHHTT
T ss_pred HHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCCcCHHHHhcc
Confidence 9999999999999888 57889999999988989889999999999999999999999997643 3568999999999
Q ss_pred ccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHc
Q 008429 214 SQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSF 257 (565)
Q Consensus 214 s~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (565)
|+|||||||+++|||+|.|+....... .|.+++++++++.++.
T Consensus 367 SEGTLGIITeatLrL~P~P~~~~~~~~-~f~d~~~a~~av~~i~ 409 (658)
T 4bby_A 367 SEGTLGVITEATIKIRPTPEYQKYGSV-AFPNFEQGVACLREIA 409 (658)
T ss_dssp CTTSSCEEEEEEEECEECCSEEEEEEE-EESSHHHHHHHHHHHH
T ss_pred CCCcCcceeeeeeeeccCCcccccccc-ccCCchhhhhhHHHHH
Confidence 999999999999999999997654443 4678999998888774
No 8
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2.7e-30 Score=285.68 Aligned_cols=188 Identities=15% Similarity=0.185 Sum_probs=156.2
Q ss_pred CCCCHHHHHHHHHHHHh--c-CCCCCceeeecCCCceeecccccccccCCeEEEEcCCCCCc-----eEEeCCCcEEEEc
Q 008429 59 QKEHDENVKKVVKRLKE--R-NPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNI-----LDIDKDRMIAKVE 130 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~--~-~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~i-----l~vd~~~~~v~Ve 130 (565)
.|.+.++|++++++|++ + +. .....|++|++. |.+. ..+|++|||++||+| +++|+++.+|+||
T Consensus 74 ~P~s~~ev~~~v~~a~~~~~~~~--~v~~~G~G~~~~--g~~~----~~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~ 145 (534)
T 1w1o_A 74 YPSSTGDLVALLSAANSTPGWPY--TIAFRGRGHSLM--GQAF----APGGVVVNMASLGDAAAPPRINVSADGRYVDAG 145 (534)
T ss_dssp CCSSHHHHHHHHHHHHHCTTCCC--CEEEESSCCCSS--STTC----CTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEE
T ss_pred ecCCHHHHHHHHHHHHhcCCCCc--eEEEECCCCCCC--CCcC----CCCeEEEECccccccccCccEEEcCCCCEEEEC
Confidence 79999999999999997 3 43 223334444432 2111 137999999999998 8999988999999
Q ss_pred CCCCHHHHHHHHccCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEEEcCCCCchhhhhh
Q 008429 131 PLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYA 210 (565)
Q Consensus 131 ~Gv~~~~L~~~l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~~s~~~~~~dLf~a 210 (565)
||+++.+|++++.++|++++..++...+||||+++++|.|+.+.+||.++|+|++++||++||++++++++ +|+||||+
T Consensus 146 aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~-~~~dL~~~ 224 (534)
T 1w1o_A 146 GEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQ-LNADLFDA 224 (534)
T ss_dssp TTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESS-SSHHHHHH
T ss_pred CCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCC-CChhhHhh
Confidence 99999999999999999876555678899999999889999999999999999999999999999999986 89999999
Q ss_pred cccccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHH
Q 008429 211 IPWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADS 256 (565)
Q Consensus 211 ~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (565)
++||+|+|||||+++||++|.++....... .+.+++++.++...+
T Consensus 225 ~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~ 269 (534)
T 1w1o_A 225 VLGGLGQFGVITRARIAVEPAPARARWVRF-VYTDFAAFSADQERL 269 (534)
T ss_dssp HTTCTTCSEEEEEEEEEEEECCSEEEEEEE-EESCHHHHHHHHHHH
T ss_pred hcCCCCCcEEEEEEEEEEEECCcceEEEEE-EeCCHHHHHHHHHHH
Confidence 999999999999999999999985432222 345677777766555
No 9
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.97 E-value=1.3e-29 Score=277.97 Aligned_cols=219 Identities=17% Similarity=0.222 Sum_probs=174.0
Q ss_pred EecCCCcccccce--eeccc-cccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccC
Q 008429 31 VVLPISVTIYFLI--YLGDV-KSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA 104 (565)
Q Consensus 31 ~~lp~s~~~~~~~--~~~~~-~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 104 (565)
++.|.|+.|.... +.+|. |+......|. .|.++++|+++++++++++. ...+++++|++. |.+.+....+
T Consensus 24 v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~--~~~~r~gGh~~~--g~s~~~~~~~ 99 (500)
T 3tsh_A 24 LYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSV--RIRVRSGGHDYE--GLSYRSLQPE 99 (500)
T ss_dssp EEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTC--EEEEESSCCCTT--CTTTCCSSSC
T ss_pred EECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCC--cEEEEcCCcCCC--CCcCCCCCcC
Confidence 5679999997542 23442 5544445565 89999999999999999984 344446666654 4333333456
Q ss_pred CeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHccCCceeee-ecCCCccchhchhcccCCCCCCccccccccee
Q 008429 105 RHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAV-VAELDDLTVGGLINGYGIEGSSHIYGLFSDTV 183 (565)
Q Consensus 105 ~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv-~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V 183 (565)
+|++|||++||+| ++|+++++|+||||+++++|+++|.++|+.+++ .+.+++++|||.+++||+|..+++||+.+|+|
T Consensus 100 ~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v 178 (500)
T 3tsh_A 100 TFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLRKYGIAAENV 178 (500)
T ss_dssp CEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHHHHCCGGGGE
T ss_pred CeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCccccccCChhhhe
Confidence 8999999999998 999999999999999999999999999976543 35799999999999999999999999999999
Q ss_pred eEEEEEecCceEEEEcCCCCchhhhhhcccc-cCCCceEEEEEEEEEeccceeEE-EEe-cCCCCHHHHHHHHHHH
Q 008429 184 VAYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIPIKEYMKL-TYK-PVASNLREIAQAYADS 256 (565)
Q Consensus 184 ~~~evVladG~vv~~s~~~~~~dLf~a~~Gs-~G~lGIVt~~tl~l~p~~~~~~~-~~~-~~~~~~~~~~~~~~~~ 256 (565)
+++|||++||++++.+. +++||||+++|+ +|+|||||+++||++|.++.+.. .+. .......+++.+++.+
T Consensus 179 ~~~~vV~a~G~i~~~~~--~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (500)
T 3tsh_A 179 IDVKLVDANGKLHDKKS--MGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAVDIINKWQVV 252 (500)
T ss_dssp EEEEEECTTSCEECHHH--HCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHHHHHHHHHHH
T ss_pred eeEEEECCCceEEECCC--CChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHHHHHHHHHHh
Confidence 99999999999986543 689999999965 67999999999999999885432 111 2234566777777776
No 10
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=1.6e-28 Score=273.32 Aligned_cols=194 Identities=16% Similarity=0.179 Sum_probs=157.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQI 138 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L 138 (565)
.|.+.++|++++++|++++. ....+|+++++. |.+......+++|+|||++||+|+++|+++.+|+||||+++.+|
T Consensus 143 ~P~s~eeV~~iv~~a~~~~~--pv~~~GgGts~~--gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l 218 (584)
T 2uuu_A 143 LPHSHEEVERLVQLAHKYNV--VIIPMGGGSNIV--GAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPEL 218 (584)
T ss_dssp CCCSHHHHHHHHHHHHHHTC--EEEEESSCCCSS--CTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred eCCCHHHHHHHHHHHHHcCC--eEEEEeCCCCCC--CCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHH
Confidence 79999999999999999885 223334444332 11111101146899999999999999999999999999999999
Q ss_pred HHHHccCCceeeeecC-CCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEE--EcCCCCchhhhhhccccc
Q 008429 139 SRATCPMNLSLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVR--ATKDNEYKDLFYAIPWSQ 215 (565)
Q Consensus 139 ~~~l~~~Gl~~pv~p~-~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~--~s~~~~~~dLf~a~~Gs~ 215 (565)
+++|.++|+.+|.+|+ ...+||||++++++.|..+.+||.++|+|++++||++||++++ ..+++.++||+|+++||+
T Consensus 219 ~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~~Gse 298 (584)
T 2uuu_A 219 EKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHIILGSE 298 (584)
T ss_dssp HHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHHTTCT
T ss_pred HHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhhccCC
Confidence 9999999999988885 6789999999888888888999999999999999999999886 224447899999999999
Q ss_pred CCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHHc
Q 008429 216 GTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADSF 257 (565)
Q Consensus 216 G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (565)
|+|||||+++||++|.|+....... .|.+++++++++.++.
T Consensus 299 GtlGIIT~~tlrl~p~p~~~~~~~~-~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 299 GTLGIITEAVMKVHAVPQAVEYYGF-LFPTFAHAVSALQQIR 339 (584)
T ss_dssp TSSCEEEEEEEECEECCSEEEEEEE-EESSHHHHHHHHHHHH
T ss_pred CCcEEEEEEEEEEEecccceEEEEE-EcCCHHHHHHHHHHHH
Confidence 9999999999999999985443333 3578999988888774
No 11
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.96 E-value=2.3e-29 Score=273.32 Aligned_cols=213 Identities=18% Similarity=0.201 Sum_probs=174.7
Q ss_pred EecCCCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeE
Q 008429 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (565)
Q Consensus 31 ~~lp~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (565)
+++|.+..|+... .+ |+......|. .|.+.++|+++++++++++. ...++|++|++. |.+. ..+|+
T Consensus 16 v~~p~~~~y~~~~--~~-~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~v~ggGh~~~--~~~~----~~~gv 84 (459)
T 2bvf_A 16 VIYPDDSGFDAIA--NI-WDGRHLQRPSLIARCLSAGDVAKSVRYACDNGL--EISVRSGGHNPN--GYAT----NDGGI 84 (459)
T ss_dssp EECTTSTTHHHHH--CC-SCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTC--CEEEESSCCCTT--CTTC----CSSSE
T ss_pred EECCCCccHHHHH--HH-hhhhccCCCCEEEecCCHHHHHHHHHHHHHcCC--cEEEEcCCcCCC--Cccc----cCCeE
Confidence 5779999999753 33 5443334555 79999999999999999885 334445555543 2211 35799
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHccCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEEE
Q 008429 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYE 187 (565)
Q Consensus 108 vIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~e 187 (565)
+|||++||+| ++|+++.+|+||||+++.+|+++|.++|+.+|+ +.++.++|||++++||+|+.+++||.++|+|++++
T Consensus 85 vi~l~~l~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSI-HIDTAGSRARIGGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCE-EECCCCCEEEECCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 9999999999 999999999999999999999999999999985 77899999999999999999999999999999999
Q ss_pred EEecCceEEEEcCCCCchhhhhhcccccCCCceEEEEEEEEEecc-ceeEEEEecCCCCHH--HHHHHHHHHc
Q 008429 188 IVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIK-EYMKLTYKPVASNLR--EIAQAYADSF 257 (565)
Q Consensus 188 vVladG~vv~~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~~ 257 (565)
||++||++++++++ +++||||+++||+|+|||||+++||++|.| ......+.....+.+ ++++++.++.
T Consensus 163 vV~~~G~i~~~~~~-~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (459)
T 2bvf_A 163 LVTATGDVIYCSDD-ERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDAL 234 (459)
T ss_dssp EECTTSCEEEEESS-SSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred EEcCCCeEEEeCCC-CChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHH
Confidence 99999999999986 899999999999999999999999999994 433333222233466 7788887764
No 12
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=99.96 E-value=3.7e-29 Score=272.35 Aligned_cols=217 Identities=19% Similarity=0.241 Sum_probs=174.2
Q ss_pred EEecCCCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCe
Q 008429 30 FVVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARH 106 (565)
Q Consensus 30 ~~~lp~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~g 106 (565)
.+++|.+..|+......| ......|. .|.+.++|+++++++++++. ...++|++|++...+.+ ..+++
T Consensus 13 ~v~~p~~~~y~~~~~~~n---~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~--~v~v~ggGh~~~g~~~~----~~~~~ 83 (473)
T 3rja_A 13 PIDIPGTADYERDVEPFN---IRLPYIPTAIAQTQTTAHIQSAVQCAKKLNL--KVSAKSGGHSYASFGFG----GENGH 83 (473)
T ss_dssp CBCCTTSHHHHHHTCCSB---TTSCCCCSEEEECCSHHHHHHHHHHHHHTTC--CEEEESSCCCTTCGGGT----SSSSC
T ss_pred cEECCCCCchHHHHHHhh---cccCCCCCEEEEeCCHHHHHHHHHHHHHcCC--eEEEEcCCCCCCCCccc----CCCCe
Confidence 377899999998754434 22234454 89999999999999999885 23333444543311111 12478
Q ss_pred EEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHccCC-ceeeeecCCCccchhchhcccCCCCCCcccccccceeeE
Q 008429 107 FEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMN-LSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVA 185 (565)
Q Consensus 107 ivIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~G-l~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~ 185 (565)
++|||++||+|.++|+++++|+||||+++.+|+++|.++| +.+| .|.++.+||||++++||+|..+++||+++|+|++
T Consensus 84 vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p-~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~ 162 (473)
T 3rja_A 84 LMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYGRAIS-HGTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVG 162 (473)
T ss_dssp EEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEE
T ss_pred EEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEec-cCCCCCcEeeeeccCCCCCcccccccchHhheee
Confidence 9999999999956999999999999999999999999999 8776 4889999999999999999999999999999999
Q ss_pred EEEEecCceEEEEcCCCCchhhhhhcccccCCCceEEEEEEEEEeccceeE-EEEecCCC---CHHHHHHHHHHHc
Q 008429 186 YEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMK-LTYKPVAS---NLREIAQAYADSF 257 (565)
Q Consensus 186 ~evVladG~vv~~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~~~~-~~~~~~~~---~~~~~~~~~~~~~ 257 (565)
++||++||++++++++ +++||||+++||+|+|||||+++||++|.|+.+. ......+. +..+++++++++.
T Consensus 163 ~~vV~a~G~v~~~~~~-~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (473)
T 3rja_A 163 VTVVLADGRIVEASAT-ENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVEDYA 237 (473)
T ss_dssp EEEECTTSCEEEEETT-BSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeEEEeCCC-CCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHHHHh
Confidence 9999999999999986 8999999999999999999999999999987432 22222333 3556777777773
No 13
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.95 E-value=1.4e-28 Score=268.76 Aligned_cols=218 Identities=17% Similarity=0.243 Sum_probs=170.9
Q ss_pred EEEecCCCcccccc--eeecc-ccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccc
Q 008429 29 VFVVLPISVTIYFL--IYLGD-VKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYK 102 (565)
Q Consensus 29 ~~~~lp~s~~~~~~--~~~~~-~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 102 (565)
-.+++|.++.|+.. .+..| .|.......|. .|.+.++|+++++++++++. ...++|++|++. |.+.. .
T Consensus 15 ~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~--~v~vrGgGh~~~--g~~~~--~ 88 (495)
T 3fw9_A 15 TVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSW--TIRLRSGGHSYE--GLSYT--S 88 (495)
T ss_dssp EECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSC--EEEEESSCCCTT--CTTSC--C
T ss_pred CeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCC--eEEEECCCcCCC--Ccccc--C
Confidence 34678999999986 23444 24433344565 89999999999999999885 334445555442 22111 1
Q ss_pred cCCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHccC--CceeeeecCCCccchhchhcccCCCCCCccccccc
Q 008429 103 RARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM--NLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFS 180 (565)
Q Consensus 103 ~~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~--Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~ 180 (565)
..+|++|||++||+| ++|+++++|+||||+++.+|+++|.++ |+.+|. +.++++||||++++||+|+.+++||+++
T Consensus 89 ~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~~~G~~~ 166 (495)
T 3fw9_A 89 DTPFILIDLMNLNRV-SIDLESETAWVESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSRKYGLAA 166 (495)
T ss_dssp SSCEEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHHHHCCGG
T ss_pred CCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCcccccCCCchh
Confidence 136899999999999 999999999999999999999999999 788874 7899999999999999999999999999
Q ss_pred ceeeEEEEEecCceEEEEcCCCCchhhhhhccc-ccCCCceEEEEEEEEEeccceeEE-EEecCC--CCHHHHHHHHHHH
Q 008429 181 DTVVAYEIVLADGQVVRATKDNEYKDLFYAIPW-SQGTLGLLVSAEIKLIPIKEYMKL-TYKPVA--SNLREIAQAYADS 256 (565)
Q Consensus 181 d~V~~~evVladG~vv~~s~~~~~~dLf~a~~G-s~G~lGIVt~~tl~l~p~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 256 (565)
|+|++++||++||++++ +.. +++||||+++| |+|+|||||+++|||+|.|+.+.. .+...+ .+..+++..++++
T Consensus 167 D~v~~~~vV~adG~i~~-~~~-~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~~~ 244 (495)
T 3fw9_A 167 DNVVDAILIDANGAILD-RQA-MGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFV 244 (495)
T ss_dssp GGEEEEEEECTTCCEEC-HHH-HCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHHHH
T ss_pred heEEEEEEEcCCCCEEE-cCC-CChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHHHH
Confidence 99999999999999997 333 68999999999 789999999999999999874432 212111 2355666677665
No 14
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.95 E-value=3.4e-28 Score=266.60 Aligned_cols=218 Identities=19% Similarity=0.234 Sum_probs=169.9
Q ss_pred EEecCCCcccccce--eeccc-cccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeeccccccccc
Q 008429 30 FVVLPISVTIYFLI--YLGDV-KSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKR 103 (565)
Q Consensus 30 ~~~lp~s~~~~~~~--~~~~~-~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 103 (565)
.+++|.++.|+... ++.|. |+......|. .|.+.++|+++++++++++. ...++|++|++. |.+.. ..
T Consensus 24 ~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~--~v~vrggGh~~~--g~~~~--~~ 97 (518)
T 3vte_A 24 LVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGL--QIRTRSGGHDAE--GMSYI--SQ 97 (518)
T ss_dssp CEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTC--EEEEESSCCCTT--CTTTC--CS
T ss_pred eEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCC--cEEEECCCcCCC--CCccC--CC
Confidence 36789999999763 23332 4433334555 89999999999999999885 333445555442 22110 12
Q ss_pred CCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHccC--CceeeeecCCCccchhchhcccCCCCCCcccccccc
Q 008429 104 ARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM--NLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSD 181 (565)
Q Consensus 104 ~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~--Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d 181 (565)
.+|++|||++||+| ++|+++++|+||||+++.+|+++|.++ |+.++ .|.++++||||++++||+|+.+++||+++|
T Consensus 98 ~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~-~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D 175 (518)
T 3vte_A 98 VPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLGEVYYWINEKNENLSFP-GGYCPTVGVGGHFSGGGYGALMRNYGLAAD 175 (518)
T ss_dssp SSEEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHHHCTTEECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGG
T ss_pred CCeEEEECCCCcee-EEeCCCCEEEEeCCccHHHHHHHHHHhCCCceec-CCCCCCeeeeeeeCCCCCccccCCCCchhh
Confidence 47999999999999 999999999999999999999999986 56665 467899999999999999999999999999
Q ss_pred eeeEEEEEecCceEEEEcCCCCchhhhhhcccc-cCCCceEEEEEEEEEeccceeE-EEEecCC--CCHHHHHHHHHHHc
Q 008429 182 TVVAYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIPIKEYMK-LTYKPVA--SNLREIAQAYADSF 257 (565)
Q Consensus 182 ~V~~~evVladG~vv~~s~~~~~~dLf~a~~Gs-~G~lGIVt~~tl~l~p~~~~~~-~~~~~~~--~~~~~~~~~~~~~~ 257 (565)
+|++++||++||++++.. . +++|||||++|| +|+|||||+++|||+|.++.+. ..+...+ .+..+++.+++++.
T Consensus 176 ~V~~~evV~adG~iv~~~-~-~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 253 (518)
T 3vte_A 176 NIIDAHLVNVDGKVLDRK-S-MGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIA 253 (518)
T ss_dssp GEEEEEEECTTCCEECHH-H-HCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHG
T ss_pred eEEEEEEEccCCeEEEee-c-cccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 999999999999999653 2 689999999998 8999999999999999987432 2222122 23456677777763
No 15
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.95 E-value=1.6e-27 Score=261.42 Aligned_cols=214 Identities=17% Similarity=0.142 Sum_probs=168.0
Q ss_pred EecCCCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeE
Q 008429 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (565)
Q Consensus 31 ~~lp~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (565)
++.|.+..|+.... . |.......|. .|.+.++|+++++++++.+. ...++|++|.+. |.+.+ ..++|+
T Consensus 20 ~~~~~~~~y~~~~~--~-~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~v~ggGh~~~--~~~~~--~~~~gv 90 (503)
T 1zr6_A 20 FHEEDSEGWDMDGT--A-FNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGV--QISAKGGGHSYG--SYGFG--GEDGHL 90 (503)
T ss_dssp ECCTTSHHHHHHTS--C-SBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTC--CEEEESSCCCTT--CTTTT--SSSSCE
T ss_pred ecCCCccchHHHhh--h-hhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCC--eEEEECCCcCCC--CCccc--CCCCcE
Confidence 57899999986522 2 4332333454 79999999999999999885 333445555443 11111 024689
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHccC-CceeeeecCCCccchhchhcccCCCCCCcccccccceeeEE
Q 008429 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPM-NLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAY 186 (565)
Q Consensus 108 vIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~-Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~ 186 (565)
+|||++||+| ++| ++++|+||||+++.+|+++|.++ |+.+| .|.++.++|||.+++||.|+.+++||.++|+|+++
T Consensus 91 vIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~-~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 167 (503)
T 1zr6_A 91 MLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALS-HGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGA 167 (503)
T ss_dssp EEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECC-CCSCTTSBHHHHHHHCCCSTTHHHHCCGGGGEEEE
T ss_pred EEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeC-CCCCCcCchhhhhcCCCCCcccccccChhheEEEE
Confidence 9999999999 999 88899999999999999999555 58887 47889999999999999999999999999999999
Q ss_pred EEEecCceEEEEcCCCCchhhhhhcccccCCCceEEEEEEEEEecccee-EEEEecCCC--CHHHHHHHHHHHc
Q 008429 187 EIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYM-KLTYKPVAS--NLREIAQAYADSF 257 (565)
Q Consensus 187 evVladG~vv~~s~~~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 257 (565)
+||++||++++++++ +++||||+++||+|+|||||+++||++|.++.. ...+...++ ++.+++++++++.
T Consensus 168 ~vV~a~G~i~~~~~~-~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (503)
T 1zr6_A 168 TVVLADASIVHVSET-ENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWA 240 (503)
T ss_dssp EEECTTSCEEEEBTT-BSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCEEEeCCC-CCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 999999999999986 899999999999999999999999999998733 222221222 3456667776663
No 16
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.94 E-value=3.2e-27 Score=258.49 Aligned_cols=186 Identities=17% Similarity=0.191 Sum_probs=153.2
Q ss_pred EecCCCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeE
Q 008429 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (565)
Q Consensus 31 ~~lp~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (565)
+++|.++.|+...+..| ......|. .|.++++|+++++++++++. ...++|++|++. |.+. ..++|+
T Consensus 12 ~~~p~~~~y~~~~~~~n---~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~--~v~vrggGh~~~--g~~~---~~~~gv 81 (501)
T 3pop_A 12 TVGREDPRYIELSHSDN---HRFVVEPEEFFLPATPDDVVASLQKAVTEGR--GVACRSGGHCGQ--DFVG---TPRRDL 81 (501)
T ss_dssp EEETTSTTHHHHTCCSC---TTSCCCCSEEEECSSHHHHHHHHHHHHHTTC--CEEEESSCCCSS--STTT---SSCCSE
T ss_pred eECCCCcchHHHHHHHh---hccCCCCCEEEEeCCHHHHHHHHHHHHHcCC--eEEEEeCCccCC--Cccc---cCCCEE
Confidence 67899999998754333 22234454 89999999999999999885 333445555442 2111 124689
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHc-cCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEE
Q 008429 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC-PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAY 186 (565)
Q Consensus 108 vIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~-~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~ 186 (565)
+|||++||+| ++|+++++|+||||+++.+|+++|. ++|+.+| .|.+++++|||++++||+|+.+++||+++|+|+++
T Consensus 82 vIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~-~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~ 159 (501)
T 3pop_A 82 VLDLHNLHAI-GPAADGAGVRVGSGATVDQVQKALFRRWNAALP-LGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAV 159 (501)
T ss_dssp EEECTTCCCE-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCC-CCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEecccCCe-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeC-CCCCCCceEeeccccCCCcccccccccHHHhEEEE
Confidence 9999999998 9999999999999999999999996 5899887 57899999999999999999999999999999999
Q ss_pred EEEe--cCce--EEEEcC--CCCchhhhhhcccc-cCCCceEEEEEEEE
Q 008429 187 EIVL--ADGQ--VVRATK--DNEYKDLFYAIPWS-QGTLGLLVSAEIKL 228 (565)
Q Consensus 187 evVl--adG~--vv~~s~--~~~~~dLf~a~~Gs-~G~lGIVt~~tl~l 228 (565)
|||+ +||+ ++++++ +.+++|||||++|| +|+|||||+++||+
T Consensus 160 evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 160 EVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp EEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred EEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 9999 8999 677632 23789999999998 69999999999998
No 17
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.94 E-value=9.2e-27 Score=256.44 Aligned_cols=216 Identities=16% Similarity=0.180 Sum_probs=164.6
Q ss_pred EEecCCCcccccce-eeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCC
Q 008429 30 FVVLPISVTIYFLI-YLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRAR 105 (565)
Q Consensus 30 ~~~lp~s~~~~~~~-~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 105 (565)
.+++|.|..|+... +..| ......|. .|.+.++|+++++++++++. ...++|++|++. |.+.+ .++
T Consensus 33 ~v~~p~d~~Y~~~~~~~~n---~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~v~ggGh~~~--g~~~~---~~~ 102 (523)
T 2wdx_A 33 VKVTPDDPRYLNLKLRGAN---SRFNGEPDYIHLVGSTQQVADAVEETVRTGK--RVAVRSGGHCFE--DFVDN---PDV 102 (523)
T ss_dssp EEECTTSTTHHHHHTCSSC---TTCCCCCSEEEECSSHHHHHHHHHHHHHHTC--CEEEESSCCCSS--SSSSS---TTC
T ss_pred eEECCCCcchHHHHhhhhh---hcccCCCCEEEEeCCHHHHHHHHHHHHHcCC--cEEEEcCCCCCC--CCccC---CCC
Confidence 46789999999764 3323 22223444 78999999999999999885 333445555543 21111 247
Q ss_pred eEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHc-cCCceeeeecCCCccchhchhcccCCCCCCcccccccceee
Q 008429 106 HFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC-PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVV 184 (565)
Q Consensus 106 givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~-~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~ 184 (565)
|++|||++||+| ++|+++.+|+||||+++.+|+++|. ++|+.++. |.++++||||++++||+|+.+++||+++|+|+
T Consensus 103 gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 180 (523)
T 2wdx_A 103 KVIIDMSLLTEI-AYDPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLY 180 (523)
T ss_dssp CEEEECTTCCCE-EEETTTTEEEECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCE-EEcCCCCEEEEcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccccccChhheEE
Confidence 899999999999 9999999999999999999999998 59999875 88999999999999999999999999999999
Q ss_pred EEEEEecC--ceEEE--EcCC--CCchhhhhhcccc-cCCCceEEEEEEEE-----------Eeccc--eeEEEEecCCC
Q 008429 185 AYEIVLAD--GQVVR--ATKD--NEYKDLFYAIPWS-QGTLGLLVSAEIKL-----------IPIKE--YMKLTYKPVAS 244 (565)
Q Consensus 185 ~~evVlad--G~vv~--~s~~--~~~~dLf~a~~Gs-~G~lGIVt~~tl~l-----------~p~~~--~~~~~~~~~~~ 244 (565)
++|||++| |+++. +++. ++++|||||+||+ +|+|||||+++||+ +|.++ +....+....+
T Consensus 181 ~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 260 (523)
T 2wdx_A 181 AVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFDWA 260 (523)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECCGG
T ss_pred EEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEeccc
Confidence 99999955 99754 3542 2344599999975 69999999999999 88875 23323322121
Q ss_pred -----CHHHHHHHHHHHc
Q 008429 245 -----NLREIAQAYADSF 257 (565)
Q Consensus 245 -----~~~~~~~~~~~~~ 257 (565)
.+.++++++.++.
T Consensus 261 ~~~~~~~~~~l~~~~~~~ 278 (523)
T 2wdx_A 261 GMTEAAFSRLLRNHGEWY 278 (523)
T ss_dssp GCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHH
Confidence 1345667766663
No 18
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.94 E-value=1.2e-26 Score=255.76 Aligned_cols=217 Identities=18% Similarity=0.172 Sum_probs=165.0
Q ss_pred EEEecCCCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCC
Q 008429 29 VFVVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRAR 105 (565)
Q Consensus 29 ~~~~lp~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 105 (565)
+.+++|.+..|+...+. |.......|. .|.+.++|+++++++++.+. ...++|++|++. |.+.+ ..+
T Consensus 34 ~~v~~p~~~~Y~~~~~~---~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~v~v~ggGh~~~--g~~~~---~~~ 103 (530)
T 2y3s_A 34 IDSVAPGDIRYEDLRRG---ENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGK--RVAVRSGGHCYE--DFVAN---SDV 103 (530)
T ss_dssp CCEECTTSTTHHHHTCC---SCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTC--CEEEESSCCCSS--STTTC---TTC
T ss_pred ceEECCCCccHHHHHhH---hhhhccCCCCEEEecCCHHHHHHHHHHHHHcCC--cEEEECCCCCCC--CCccc---CCC
Confidence 34688999999986433 3222233454 89999999999999999884 333445555442 21111 247
Q ss_pred eEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHcc-CCceeeeecCCCccchhchhcccCCCCCCcccccccceee
Q 008429 106 HFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCP-MNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVV 184 (565)
Q Consensus 106 givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~-~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~ 184 (565)
|++|||++||+| ++|+++.+|+||||+++.+|+++|.+ +|+.++. |.++++||||++++||.|+.+++||+++|+|+
T Consensus 104 gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~ 181 (530)
T 2y3s_A 104 RVVMDMSRLSAV-GFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLH 181 (530)
T ss_dssp CEEEECTTCCCE-EEETTTTEEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEE
T ss_pred eEEEEcccCCCE-EEcCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccccccchhhhee
Confidence 899999999999 99999999999999999999999985 9998875 88999999999999999999999999999999
Q ss_pred EEEEEe--cCceEE--EEcCCCCc--hhhhhhcccc-cCCCceEEEEEEEE------------Eeccc--eeEEEEecCC
Q 008429 185 AYEIVL--ADGQVV--RATKDNEY--KDLFYAIPWS-QGTLGLLVSAEIKL------------IPIKE--YMKLTYKPVA 243 (565)
Q Consensus 185 ~~evVl--adG~vv--~~s~~~~~--~dLf~a~~Gs-~G~lGIVt~~tl~l------------~p~~~--~~~~~~~~~~ 243 (565)
++|||+ ++|+++ +++++.++ +|||||++|+ +|+|||||+++||+ +|.++ .....+....
T Consensus 182 ~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 261 (530)
T 2y3s_A 182 AVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPW 261 (530)
T ss_dssp EEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEES
T ss_pred eEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecc
Confidence 999999 559984 44652134 4699999987 59999999999999 88764 2222222112
Q ss_pred C-----CHHHHHHHHHHHc
Q 008429 244 S-----NLREIAQAYADSF 257 (565)
Q Consensus 244 ~-----~~~~~~~~~~~~~ 257 (565)
+ .+.++++++.++.
T Consensus 262 ~~~~~~~~~~~l~~~~~~~ 280 (530)
T 2y3s_A 262 EGLDEAAFARLVRNHGRWF 280 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHh
Confidence 2 2356677766663
No 19
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.94 E-value=2.2e-26 Score=253.35 Aligned_cols=216 Identities=18% Similarity=0.194 Sum_probs=163.5
Q ss_pred EecCCCcccccceeeccccccccccccC---CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeE
Q 008429 31 VVLPISVTIYFLIYLGDVKSDMKSYKKR---QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHF 107 (565)
Q Consensus 31 ~~lp~s~~~~~~~~~~~~~~~~~~~~pa---~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~gi 107 (565)
+++|.+..|+... .++ |.......|. .|.+.++|+++++++++.+. ...++|++|++. |.+. ..++|+
T Consensus 32 v~~p~d~~Y~~~~-~~~-~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~--~~~vrggGh~~~--g~~~---~~~~gv 102 (521)
T 2ipi_A 32 KVDRVDRRYQDLV-TRG-FNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQ--RIAVRSGGHCFE--GFVD---DPAVRA 102 (521)
T ss_dssp EEESSSTTHHHHH-TCC-SCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTC--CEEEESSCCCTT--CGGG---CTTCCE
T ss_pred EECCCCcchHHHH-hcc-ccccccCCCCEEEEcCCHHHHHHHHHHHHHcCC--eEEEECCCcCCC--CCcc---cCCCeE
Confidence 6779999999764 122 3222233454 79999999999999999885 233345555442 2111 124789
Q ss_pred EEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHc-cCCceeeeecCCCccchhchhcccCCCCCCcccccccceeeEE
Q 008429 108 EVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC-PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAY 186 (565)
Q Consensus 108 vIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~-~~Gl~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~ 186 (565)
+|||++||+| ++|+++.+|+||||+++.+|+++|. ++|+.+|. +.++.+||||++++||.|+.+++||+++|+|+++
T Consensus 103 vIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 180 (521)
T 2ipi_A 103 VIDMSQMRQV-FYDSGKRAFAVEPGATLGETYRALYLDWGVTIPA-GVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAV 180 (521)
T ss_dssp EEECTTCCCE-EEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCC-CSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEecccCCCe-EEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCC-CCCCCcccCCcccCCCCCccccccccHhhcEEEE
Confidence 9999999999 9999999999999999999999997 79999974 7788999999999999999999999999999999
Q ss_pred EEEecC--ceEE--EEcCC--CCchhhhhhcccc-cCCCceEEEEEEEE-----------Eeccc--eeEEEEecCCCC-
Q 008429 187 EIVLAD--GQVV--RATKD--NEYKDLFYAIPWS-QGTLGLLVSAEIKL-----------IPIKE--YMKLTYKPVASN- 245 (565)
Q Consensus 187 evVlad--G~vv--~~s~~--~~~~dLf~a~~Gs-~G~lGIVt~~tl~l-----------~p~~~--~~~~~~~~~~~~- 245 (565)
|||++| |+++ .++++ ++++|||||++|+ +|+|||||+++||+ +|.++ .....+...+++
T Consensus 181 evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 260 (521)
T 2ipi_A 181 EVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPTSTLRHIVTWDWSAL 260 (521)
T ss_dssp EEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCSCEEEEEEEEESTTC
T ss_pred EEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCceEEEEEEEeccccc
Confidence 999977 9874 44542 2344699999985 69999999999999 88865 222222211222
Q ss_pred ----HHHHHHHHHHHc
Q 008429 246 ----LREIAQAYADSF 257 (565)
Q Consensus 246 ----~~~~~~~~~~~~ 257 (565)
+.++++++.++.
T Consensus 261 ~~~~~~~~l~~~~~~~ 276 (521)
T 2ipi_A 261 TEEAFTRIIDNHGAWH 276 (521)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 246667766663
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.93 E-value=1.6e-24 Score=240.71 Aligned_cols=184 Identities=18% Similarity=0.167 Sum_probs=138.8
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccc--cCCeEEEEc-CCCCCceEEeCCCcEEEEcCCCCH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYK--RARHFEVDL-SAFRNILDIDKDRMIAKVEPLVNM 135 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~--~~~givIdl-s~l~~il~vd~~~~~v~Ve~Gv~~ 135 (565)
.|.+.++|++++++|++++. ....+|+++++.. | +.. .++||+||| ++||+|+++|+++.+|+||||+++
T Consensus 76 ~P~s~~eV~~iv~~a~~~~~--pv~~~g~Gt~~~~-g----g~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~ 148 (560)
T 1e8g_A 76 APRNVADVQSIVGLANKFSF--PLWPISIGRNSGY-G----GAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTY 148 (560)
T ss_dssp CCSSHHHHHHHHHHHHHHTC--CEEEESSCCCTTT-T----TTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBH
T ss_pred eCCCHHHHHHHHHHHHHcCC--cEEEecCCCcCCc-C----CCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCH
Confidence 79999999999999999885 2222233332210 1 111 258999999 999999999999999999999999
Q ss_pred HHHHHHHccCCce--eeeec-CCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEEEcCC-CCch------
Q 008429 136 GQISRATCPMNLS--LAVVA-ELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKD-NEYK------ 205 (565)
Q Consensus 136 ~~L~~~l~~~Gl~--~pv~p-~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~~s~~-~~~~------ 205 (565)
.+|+++|.++|++ +|+.| +...+||||+++++|.+. .+||.++|+|++++||++||++++++.. ..++
T Consensus 149 ~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~--~~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~ 226 (560)
T 1e8g_A 149 HDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGY--TPYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETM 226 (560)
T ss_dssp HHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCS--STTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGT
T ss_pred HHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCc--ccceeHHHheeeeEEEeCCCCEEEecCcccCcccccccc
Confidence 9999999999999 87665 344789999987777664 3999999999999999999999998752 1220
Q ss_pred ---------hhhhhc-cc----------ccCCCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHH
Q 008429 206 ---------DLFYAI-PW----------SQGTLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQA 252 (565)
Q Consensus 206 ---------dLf~a~-~G----------s~G~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~ 252 (565)
+++|++ .| ++|+|||||+++|+|+|.|+.....+. .|++++++.++
T Consensus 227 ~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~-~f~~~~~a~~~ 292 (560)
T 1e8g_A 227 GLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLI-TLPKDGDLKQA 292 (560)
T ss_dssp TCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEE-EECSTTHHHHH
T ss_pred cchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEE-EcCCHHHHHHH
Confidence 333433 33 358999999999999999885443333 34555554443
No 21
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.91 E-value=7.6e-24 Score=233.34 Aligned_cols=190 Identities=22% Similarity=0.212 Sum_probs=147.1
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccCCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQI 138 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L 138 (565)
.|.+.++|++++++|++++. + ...+|+++++.. |.+.. ...+|++|||++||+|+++|+++.+|+||||+++.+|
T Consensus 62 ~P~s~~ev~~~v~~a~~~~~-p-v~~~g~G~~~~~-g~~~~--~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l 136 (520)
T 1wvf_A 62 TATTVEQVQGVVKICNEHKI-P-IWTISTGRNFGY-GSAAP--VQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQM 136 (520)
T ss_dssp ECCSHHHHHHHHHHHHHHTC-C-EEEESSCCCTTT-TTTSC--SSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHH
T ss_pred ecCCHHHHHHHHHHHHHCCC-c-EEEEcCCCCCCC-CCCCC--CCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHH
Confidence 79999999999999999885 2 223344443211 21111 0257999999999999999999999999999999999
Q ss_pred HHHHccCCceeeee--cCCCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEEEEcC-CCCchhhhhhccccc
Q 008429 139 SRATCPMNLSLAVV--AELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATK-DNEYKDLFYAIPWSQ 215 (565)
Q Consensus 139 ~~~l~~~Gl~~pv~--p~~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv~~s~-~~~~~dLf~a~~Gs~ 215 (565)
+++|.++|+.+|++ |+...+||||+++++|.|.. +||.++|+|++++||++||++++++. ..+++|+|++.+|+.
T Consensus 137 ~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~ 214 (520)
T 1wvf_A 137 YDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGY 214 (520)
T ss_dssp HHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCS
T ss_pred HHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCC
Confidence 99999999998876 65568999999877776643 89999999999999999999999864 125678877777765
Q ss_pred C----------CCceEEEEEEEEEeccceeEEEEecCCCCHHH---HHHHHHHH
Q 008429 216 G----------TLGLLVSAEIKLIPIKEYMKLTYKPVASNLRE---IAQAYADS 256 (565)
Q Consensus 216 G----------~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~---~~~~~~~~ 256 (565)
| +|||||+++||++|.|+....... .|+++++ +++++.++
T Consensus 215 Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~-~f~~~~~~~~~~~~~~~~ 267 (520)
T 1wvf_A 215 GPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEV-IFEDEADIVEIVDALRPL 267 (520)
T ss_dssp SCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEE-EECCGGGHHHHHHHHHHH
T ss_pred CcchhhhccCCceEEEEEEEEEEEecCCeEEEEEE-EeCCHHHHHHHHHHHHHH
Confidence 4 999999999999999986543222 2445444 44465555
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.90 E-value=3.6e-24 Score=237.11 Aligned_cols=192 Identities=9% Similarity=-0.011 Sum_probs=153.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccc--cCCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYK--RARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMG 136 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~--~~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~ 136 (565)
.|.+.++|++++++|++++. ..++.|+++++. |.+..... ..++++|||++||+|+++|+ +++|+||||+++.
T Consensus 51 ~P~s~~eV~~iv~~a~~~~~--~v~~~GgGt~~~--G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv~l~ 125 (571)
T 1f0x_A 51 FPGSLLELWRVLKACVTADK--IILMQAANTGLT--EGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGTTLY 125 (571)
T ss_dssp CCSSHHHHHHHHHHHHHTTC--EEEEESSCCCSS--STTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTCBHH
T ss_pred eeCCHHHHHHHHHHHHHcCC--CEEEECCCcCCC--CCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCCcCHH
Confidence 79999999999999999885 333445555432 22211100 01389999999999989995 5799999999999
Q ss_pred HHHHHHccCCceeeeecC--CCccchhchhcccCCCCCCcccccccc----------------eeeEEEEEecCceEEEE
Q 008429 137 QISRATCPMNLSLAVVAE--LDDLTVGGLINGYGIEGSSHIYGLFSD----------------TVVAYEIVLADGQVVRA 198 (565)
Q Consensus 137 ~L~~~l~~~Gl~~pv~p~--~~~~tvGG~i~ggg~g~~s~~~G~~~d----------------~V~~~evVladG~vv~~ 198 (565)
+|+++|.++|+.+|++++ +..+||||++++++.|..+.+||.+.| +|++++||++||+++++
T Consensus 126 ~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~ 205 (571)
T 1f0x_A 126 SLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSK 205 (571)
T ss_dssp HHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHH
T ss_pred HHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEe
Confidence 999999999998876663 356799999988788878999999999 99999999999999987
Q ss_pred c----------------CCCCch-----------------hhhhhc--ccccCCCceEEEEEEEEEeccceeEEEEecCC
Q 008429 199 T----------------KDNEYK-----------------DLFYAI--PWSQGTLGLLVSAEIKLIPIKEYMKLTYKPVA 243 (565)
Q Consensus 199 s----------------~~~~~~-----------------dLf~a~--~Gs~G~lGIVt~~tl~l~p~~~~~~~~~~~~~ 243 (565)
+ +.+.++ ||++++ +||+|+||| |+++|+++|.|+.....+. .+
T Consensus 206 ~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~-~~ 283 (571)
T 1f0x_A 206 LDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYI-GT 283 (571)
T ss_dssp HHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEE-EE
T ss_pred cCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEE-Ee
Confidence 5 233445 999999 999999999 9999999999986554444 36
Q ss_pred CCHHHHHHHHHHHc
Q 008429 244 SNLREIAQAYADSF 257 (565)
Q Consensus 244 ~~~~~~~~~~~~~~ 257 (565)
++++++.+++.++.
T Consensus 284 ~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 284 NQPEVLTEIRRHIL 297 (571)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 78998888887763
No 23
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.81 E-value=1.2e-19 Score=177.90 Aligned_cols=117 Identities=18% Similarity=0.146 Sum_probs=103.4
Q ss_pred eEEeCCCcEEEEcCCCCHHHHHHHHccCCceeeeecC-CCccchhchhcccCCCCCCcccccccceeeEEEEEecCceEE
Q 008429 118 LDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAE-LDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVV 196 (565)
Q Consensus 118 l~vd~~~~~v~Ve~Gv~~~~L~~~l~~~Gl~~pv~p~-~~~~tvGG~i~ggg~g~~s~~~G~~~d~V~~~evVladG~vv 196 (565)
+++|+++.+|+||||+++.+|+++|.++|+++|+.|+ ++. ||||++++|+.| .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 3899999999999999999999999999999988776 555 999999766654 889999 9999999999999999
Q ss_pred EEcCC----CCchhhhhhcccccCCCceEEEEEEEEEeccceeEEEE
Q 008429 197 RATKD----NEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLTY 239 (565)
Q Consensus 197 ~~s~~----~~~~dLf~a~~Gs~G~lGIVt~~tl~l~p~~~~~~~~~ 239 (565)
+++.+ ..++||||+++||+|+|||||+++||++|.++.....+
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~ 122 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRR 122 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEE
T ss_pred EECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEE
Confidence 99763 24689999999999999999999999999988554333
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.78 E-value=5.8e-19 Score=183.25 Aligned_cols=144 Identities=19% Similarity=0.193 Sum_probs=120.4
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeeccccccccc---CCeEEEEcCCCCCceEEeCCCcEEEEcCCCCH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKR---ARHFEVDLSAFRNILDIDKDRMIAKVEPLVNM 135 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~---~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~ 135 (565)
.|.+.++|+++++++++.+. |+..+|.|+|.... .+|++|||++||+| ++|. .+++||||+++
T Consensus 54 ~P~s~eev~~~l~~a~~~~~-----------pv~~~GgGtnl~~~~~~~~gvvI~l~~m~~i-~id~--~~v~v~aGv~~ 119 (326)
T 1hsk_A 54 TPTKNEEVQAVVKYAYQNEI-----------PVTYLGNGSNIIIREGGIRGIVISLLSLDHI-EVSD--DAIIAGSGAAI 119 (326)
T ss_dssp CCSSHHHHHHHHHHHHHTTC-----------CEEEESSCSSEEECTTCEEEEEEECTTCCCE-EEET--TEEEEETTSBH
T ss_pred EcCCHHHHHHHHHHHHHcCC-----------CEEEECCCCccccCCCCCCeEEEEeCCCCce-EEcC--CEEEEeCCCcH
Confidence 69999999999999999875 45455555443211 16899999999999 9984 68999999999
Q ss_pred HHHHHHHccCCc----eeeeecCCCccchhchhcccCCCCCCcccc-cccceeeEEEEEecCceEEEEcCCCCchhhhhh
Q 008429 136 GQISRATCPMNL----SLAVVAELDDLTVGGLINGYGIEGSSHIYG-LFSDTVVAYEIVLADGQVVRATKDNEYKDLFYA 210 (565)
Q Consensus 136 ~~L~~~l~~~Gl----~~pv~p~~~~~tvGG~i~ggg~g~~s~~~G-~~~d~V~~~evVladG~vv~~s~~~~~~dLf~a 210 (565)
.+|++++.++|+ +++..|+ ||||+++.++.+ || .++|+|.++++|++||++++++.+ +++|+
T Consensus 120 ~~l~~~l~~~Gl~gLe~~~~~Pg----tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~~----~~~~g 186 (326)
T 1hsk_A 120 IDVSRVARDYALTGLEFACGIPG----SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTTK----ELELD 186 (326)
T ss_dssp HHHHHHHHHTTEESCGGGTTCCS----BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEETT----TTTCB
T ss_pred HHHHHHHHHCCCccccccCCCcc----hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEEChH----HcCCC
Confidence 999999999999 7776665 899999654433 78 999999999999999999999875 77888
Q ss_pred cccc----cCCCceEEEEEEEEEec
Q 008429 211 IPWS----QGTLGLLVSAEIKLIPI 231 (565)
Q Consensus 211 ~~Gs----~G~lGIVt~~tl~l~p~ 231 (565)
++.+ +| ||||+++|++.|.
T Consensus 187 yr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 187 YRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp TTBCHHHHTT--CEEEEEEEECEEC
T ss_pred ccccccCCCC--EEEEEEEEEEEcC
Confidence 8874 35 9999999999998
No 25
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.78 E-value=7.1e-19 Score=181.93 Aligned_cols=148 Identities=16% Similarity=0.177 Sum_probs=119.7
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccC---CeEEEEcCCCCCceEEeCCCcEEEEcCCCCH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA---RHFEVDLSAFRNILDIDKDRMIAKVEPLVNM 135 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~---~givIdls~l~~il~vd~~~~~v~Ve~Gv~~ 135 (565)
.|.+.++|+++++++++.+. |+..+|.|+|....+ +|++|||++|++| ++|. .+++|+||+++
T Consensus 60 ~P~s~eev~~~v~~a~~~~~-----------pv~v~GgGsnl~~~~~~~~gvvI~l~~~~~I-~~d~--~~v~v~aG~~~ 125 (322)
T 3tx1_A 60 MPKTIEEAQEVVAYCHQNKI-----------PLTILGNGSNLIIKDGGIRGVILHLDLLQTI-ERNN--TQIVAMSGAKL 125 (322)
T ss_dssp ECSSHHHHHHHHHHHHHTTC-----------CEEEESCCTTEEECTTCEEEEEEECTTCCCE-EEET--TEEEEETTSBH
T ss_pred EeCCHHHHHHHHHHHHHcCC-----------cEEEECCccCCCcCCCCCCeEEEECCCCCcE-EECC--CEEEEecCcCH
Confidence 69999999999999999886 666667666654332 5899999999998 6764 59999999999
Q ss_pred HHHHHHHccCCce----eeeecCCCccchhchhcccCCCCCCccc-ccccceeeEEEEEecCceEEEEcCCCCchhhhhh
Q 008429 136 GQISRATCPMNLS----LAVVAELDDLTVGGLINGYGIEGSSHIY-GLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYA 210 (565)
Q Consensus 136 ~~L~~~l~~~Gl~----~pv~p~~~~~tvGG~i~ggg~g~~s~~~-G~~~d~V~~~evVladG~vv~~s~~~~~~dLf~a 210 (565)
.+|++++.++|+. ++..| .||||++..++.+ | |.++|+|+++++|++||++++++++ |++|+
T Consensus 126 ~~l~~~l~~~Gl~Gle~~~giP----gTVGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~~~----~~~~~ 192 (322)
T 3tx1_A 126 IDTAKFALNESLSGLEFACGIP----GSIGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLKRS----ELKAA 192 (322)
T ss_dssp HHHHHHHHHTTEESCGGGTTCC----SBHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEEGG----GCC--
T ss_pred HHHHHHHHHcCCcccccCCCCc----chhHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEechH----HcCcc
Confidence 9999999999995 33334 3899998543322 4 7999999999999999999999764 89999
Q ss_pred ccccc-C-CCceEEEEEEEEEeccc
Q 008429 211 IPWSQ-G-TLGLLVSAEIKLIPIKE 233 (565)
Q Consensus 211 ~~Gs~-G-~lGIVt~~tl~l~p~~~ 233 (565)
++++. | ..||||+++|+|.|.++
T Consensus 193 yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 193 YRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred hhhcccCCCCEEEEEEEEEEEeCCH
Confidence 99884 3 57899999999999864
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.72 E-value=1.4e-17 Score=174.20 Aligned_cols=149 Identities=15% Similarity=0.100 Sum_probs=123.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeeccccccccc--CCeEEEEcCCCCCceEEeC--CCcEEEEcCCCC
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKR--ARHFEVDLSAFRNILDIDK--DRMIAKVEPLVN 134 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~--~~givIdls~l~~il~vd~--~~~~v~Ve~Gv~ 134 (565)
.|.+.++|+++++++++++. |+..+|.|+|.... .+|++|+++ |++| +++. ++.+++|+||++
T Consensus 36 ~p~s~eel~~~v~~a~~~~i-----------pv~vlGgGSNll~~d~~~GvVI~l~-~~~i-~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 36 VAESIDDLKALYCSAEWASL-----------PKLIIGKGSNMLFTCHYTGMIVVNR-LNGI-EHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp EECSHHHHHHHHSSSTTTTS-----------CEEEESSCTTEEECSCEEEEEEEEC-CCCE-EEEECSSEEEEEEETTSB
T ss_pred EECCHHHHHHHHHHHHHcCC-----------CEEEECCCcCcccCCCCCeEEEEcC-CCce-EEeccCCceEEEEeCCCc
Confidence 58899999999999988876 78888888876543 379999998 9998 7753 456899999999
Q ss_pred HHHHHHHHccCCce----eeeecCCCccchhchhcccCCCCCCccccc-ccceeeEEEEEec-CceEEEEcCCCCchhhh
Q 008429 135 MGQISRATCPMNLS----LAVVAELDDLTVGGLINGYGIEGSSHIYGL-FSDTVVAYEIVLA-DGQVVRATKDNEYKDLF 208 (565)
Q Consensus 135 ~~~L~~~l~~~Gl~----~pv~p~~~~~tvGG~i~ggg~g~~s~~~G~-~~d~V~~~evVla-dG~vv~~s~~~~~~dLf 208 (565)
|.+|.+++.++||. +...|+ ||||++..+ .+.||. ++|+|+++++|++ ||++++++++ |++
T Consensus 103 ~~~l~~~a~~~Gl~GlE~l~gIPG----tVGGav~~N-----aGaYG~e~~d~v~~vevv~~~~G~i~~~~~~----dl~ 169 (357)
T 3i99_A 103 WPSLVSWCVEQGIGGLENLALIPG----CAGSAPIQN-----IGAYGVEFKDVCDYVEYLCLETGTVKRLTME----ECQ 169 (357)
T ss_dssp HHHHHHHHHHTTCTTCGGGTTCCS----BGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG----GGC
T ss_pred HHHHHHHHHHcCCcCccccCCCCc----hhHHHHHhc-----hhhhhhhHHhhEeEEEEEECCCCcEEEEeHH----HcC
Confidence 99999999999995 222333 788887432 346886 9999999999999 9999999764 899
Q ss_pred hhccccc-----CCCceEEEEEEEEEeccc
Q 008429 209 YAIPWSQ-----GTLGLLVSAEIKLIPIKE 233 (565)
Q Consensus 209 ~a~~Gs~-----G~lGIVt~~tl~l~p~~~ 233 (565)
|++|+|. |++||||+++|+|.|.++
T Consensus 170 f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 170 FGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 9999884 379999999999999764
No 27
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.71 E-value=8.3e-17 Score=167.61 Aligned_cols=153 Identities=14% Similarity=0.041 Sum_probs=122.9
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccC--CeEEEEcCCCCCceEEeCCC-cEEEEcCCCCH
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA--RHFEVDLSAFRNILDIDKDR-MIAKVEPLVNM 135 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~--~givIdls~l~~il~vd~~~-~~v~Ve~Gv~~ 135 (565)
.|.+.++|+++++++++.+. |+..+|.|+|....+ +|++|+++ |+++..++.++ .+++|+||+++
T Consensus 20 ~p~s~eel~~~l~~a~~~~~-----------pv~vlGgGSnll~~d~~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 20 CAEDEQQLLNAWQYATAEGQ-----------PVLILGEGSNVLFLEDYRGTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp EESSHHHHHHHHHHHHHTTC-----------CEEEESSCTTEEECSCEEEEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred EeCCHHHHHHHHHHHHHcCC-----------CEEEECCCcCCcccCCCCeEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 58999999999999999886 777777777765433 79999996 99986677766 69999999999
Q ss_pred HHHHHHHccCCceee-eecCCCccchhchhcccCCCCCCcccc-cccceeeEEEEEec-CceEEEEcCCCCchhhhhhcc
Q 008429 136 GQISRATCPMNLSLA-VVAELDDLTVGGLINGYGIEGSSHIYG-LFSDTVVAYEIVLA-DGQVVRATKDNEYKDLFYAIP 212 (565)
Q Consensus 136 ~~L~~~l~~~Gl~~p-v~p~~~~~tvGG~i~ggg~g~~s~~~G-~~~d~V~~~evVla-dG~vv~~s~~~~~~dLf~a~~ 212 (565)
.+|.+++.++|+... ....++ .||||++..+ .+.|| .++|+|.++++|++ +|++++++.+ |++|++|
T Consensus 88 ~~l~~~~~~~Gl~Gle~~~gIP-GtVGGa~~~N-----aGayG~ei~d~v~~v~vv~~~~G~v~~~~~~----d~~~gYR 157 (340)
T 1uxy_A 88 HRLVKYTLQEGMPGLENLALIP-GCVGSSPIQN-----IGAYGVELQRVCAYVDSVELATGKQVRLTAK----ECRFGYR 157 (340)
T ss_dssp HHHHHHHHHTTCCSCGGGTTCC-SBGGGTTTTT-----CEETTEEGGGTEEEEEEEETTTTEEEEEETG----GGTCBTT
T ss_pred HHHHHHHHHCCCCccccccCCc-cchhHHHHhc-----cccchhhHHhheeEEEEEECCCCcEEEEeHH----HhccccC
Confidence 999999999999421 111222 2788877432 23477 59999999999996 9999999864 8999999
Q ss_pred ccc-----CCCceEEEEEEEEEeccc
Q 008429 213 WSQ-----GTLGLLVSAEIKLIPIKE 233 (565)
Q Consensus 213 Gs~-----G~lGIVt~~tl~l~p~~~ 233 (565)
+|. |++||||+++|++.|.+.
T Consensus 158 ~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 158 DSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp BCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 984 369999999999999853
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.61 E-value=7.5e-16 Score=155.21 Aligned_cols=154 Identities=15% Similarity=0.124 Sum_probs=117.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccccccC---C-eEEEEcCCCCCceEEeCCCcEEEEcCCCC
Q 008429 59 QKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRA---R-HFEVDLSAFRNILDIDKDRMIAKVEPLVN 134 (565)
Q Consensus 59 ~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~---~-givIdls~l~~il~vd~~~~~v~Ve~Gv~ 134 (565)
.|.+.++|++++ +. |+..+|.++|....+ + |++|++++|++| ++|. +|+||++
T Consensus 27 ~p~s~edv~~~v------~i-----------pv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I-~vd~-----~v~aG~~ 83 (268)
T 2gqt_A 27 TVETREELKRAT------EA-----------PYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY-DLKG-----WVGAGTL 83 (268)
T ss_dssp EECSHHHHHHHT------TS-----------CEEECSSSSSEEECTTCCSSEEEEECGGGGCB-CTTS-----EEETTSB
T ss_pred EeCCHHHHHHHh------CC-----------CeEEcCCCcCceecCCCcCCeEEEEcCCCCCc-EEcC-----EEECCCC
Confidence 477888888777 43 777778887766443 3 999999999998 6652 9999999
Q ss_pred HHHHHHHHccCCceeee-ecCCCccchhchhcccCCCCCCcccc-cccceeeEEEEEecCceEEEEcCCCCchhhhhhcc
Q 008429 135 MGQISRATCPMNLSLAV-VAELDDLTVGGLINGYGIEGSSHIYG-LFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIP 212 (565)
Q Consensus 135 ~~~L~~~l~~~Gl~~pv-~p~~~~~tvGG~i~ggg~g~~s~~~G-~~~d~V~~~evVladG~vv~~s~~~~~~dLf~a~~ 212 (565)
+.+|.+++.++|+...- ...++ .||||++..++ +.|| .++|+|+++++| +||++++++++ |++|++|
T Consensus 84 ~~~l~~~~~~~Gl~Gle~~~giP-GtvGGav~~Na-----GayG~e~~d~v~~v~vv-~~G~v~~~~~~----~l~~~YR 152 (268)
T 2gqt_A 84 LPLLVQEAARAGLSGLEGLLGIP-AQVGGAVKMNA-----GTRFGEMADALEAVEVF-HDGAFHVYCPE----ELGFGYR 152 (268)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCC-CBHHHHHHTTC-----EETTEEGGGGEEEEEEE-ETTEEEEECGG----GSCCBTT
T ss_pred HHHHHHHHHHcCCcCCccccCcc-chhHHHHHhcc-----ccCchhHHhheeEEEEE-CCCcEEEEchH----HcccccC
Confidence 99999999999995211 11223 28999885432 3488 799999999999 99999999764 8999999
Q ss_pred cccC-CCceEEEEEEEEEeccceeEEEEecCCCCHHHHHHHHHHH
Q 008429 213 WSQG-TLGLLVSAEIKLIPIKEYMKLTYKPVASNLREIAQAYADS 256 (565)
Q Consensus 213 Gs~G-~lGIVt~~tl~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (565)
+|.- .-||||+++|||.|.+. .++.+.++++.+.
T Consensus 153 ~s~~~~~gIVt~~~~~L~~~~~----------~~i~~~~~~v~~~ 187 (268)
T 2gqt_A 153 KSHLPPGGIVTRVRLKLKERPK----------EEILRRMAEVDRA 187 (268)
T ss_dssp BCCCSTTCEEEEEEECCEECCH----------HHHHHHHHHHHHH
T ss_pred CCCcCCCceEEEEEEEEEeCCH----------HHHHHHHHHHHHH
Confidence 9851 12499999999999742 3455556666555
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.62 E-value=5.2e-05 Score=76.81 Aligned_cols=110 Identities=13% Similarity=0.143 Sum_probs=71.8
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCCHHHHHHH-HccCCce--------eeeecC-CCccchhchhcccCCC
Q 008429 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISRA-TCPMNLS--------LAVVAE-LDDLTVGGLINGYGIE 170 (565)
Q Consensus 104 ~~givIdls~---l~~il~vd~~~~~v~Ve~Gv~~~~L~~~-l~~~Gl~--------~pv~p~-~~~~tvGG~i~ggg~g 170 (565)
..+++||+++ |+.| +.+. +.+++|+|+++.+|.+. +.+.++. +. .+. -+..||||++.++..
T Consensus 47 ~~~~lIdl~~i~eL~~i-~~~~--~~l~iGA~~tl~~l~~~~~~~~~~~~L~~a~~~~a-~~qiRN~gTvGGni~~~~~- 121 (287)
T 1ffv_C 47 QPEHLIDINRIPELRGI-REEG--STVVIGAMTVENDLISSPIVQARLPLLAEAAKLIA-DPQVRNRGTIGGDIAHGDP- 121 (287)
T ss_dssp CCSEEEECTTCGGGCCE-EEET--TEEEEETTCBHHHHHHCHHHHHHCHHHHHHGGGSS-CTTGGGTCBHHHHHHTCCT-
T ss_pred CCCEEEECCCChhhcce-EecC--CEEEEccCCcHHHHhhChHHHHHhHHHHHHHHHhC-CHHHhcceechhhhccCCC-
Confidence 4689999985 6776 6644 46999999999999963 3333321 11 111 124699999965431
Q ss_pred CCCcccccccceee-------EEEEEecCceEEEEcCCCCchhhhhhccccc-CCCceEEEEEEEEEec
Q 008429 171 GSSHIYGLFSDTVV-------AYEIVLADGQVVRATKDNEYKDLFYAIPWSQ-GTLGLLVSAEIKLIPI 231 (565)
Q Consensus 171 ~~s~~~G~~~d~V~-------~~evVladG~vv~~s~~~~~~dLf~a~~Gs~-G~lGIVt~~tl~l~p~ 231 (565)
.+|.+. .+++..++| ..+...+ |+|.+++-+. ..-.|||+++|.+.+.
T Consensus 122 --------~~D~~~~l~Al~A~v~~~~~~G-~r~i~~~----df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 122 --------GNDHPALSIAVEAHFVLEGPNG-RRTVPAD----GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp --------TCSHHHHHHHTTCEEEEEETTE-EEEEEST----TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred --------cHHHHHHHHHcCcEEEEEcCCc-eEEEEHH----HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 344443 588899999 5555544 7777765432 2235999999987653
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.47 E-value=0.0012 Score=71.18 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=72.7
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCCHHHHHHHHccCCce--------eeeecCCCccchhchhcccCCCCC
Q 008429 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLS--------LAVVAELDDLTVGGLINGYGIEGS 172 (565)
Q Consensus 104 ~~givIdls~---l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~Gl~--------~pv~p~~~~~tvGG~i~ggg~g~~ 172 (565)
..+++||+++ |+.| +.+. +.+++++|+++.+|.+.+.+ ++. +...+--+..||||.+.++..
T Consensus 218 ~~~~lIdl~~i~eL~~I-~~~~--~~l~IGA~vtl~~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp--- 290 (462)
T 2w3s_A 218 DLPEVAFLSHCKDLAQI-RETP--DGYGIGAGVTIAALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP--- 290 (462)
T ss_dssp CCCSEEECTTCGGGSCE-EEET--TEEEEETTCBHHHHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT---
T ss_pred CCCEEEEcCCChhhCcE-EEcC--CEEEEccCCcHHHHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC---
Confidence 4678999988 6776 6653 46999999999999988543 321 111111234699999976442
Q ss_pred Ccccccccceee----EEEEEecCceEEEEcCCCCchhhhhhcccc-cCCCceEEEEEEEEEe
Q 008429 173 SHIYGLFSDTVV----AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIP 230 (565)
Q Consensus 173 s~~~G~~~d~V~----~~evVladG~vv~~s~~~~~~dLf~a~~Gs-~G~lGIVt~~tl~l~p 230 (565)
.+.+...++ .+++..++|+ .+.. -.|+|.+++-+ ...--||++++|...+
T Consensus 291 ---~sD~~~~L~ALdA~v~l~~~~G~-R~vp----~~dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 291 ---IGDGPPALIAMGASLTLRRGQER-RRMP----LEDFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp ---TCSHHHHHHHTTCEEEEEBTTBC-CCCB----GGGGEEETTEESCCTTCEEEEEEEESCC
T ss_pred ---cchHHHHHHHcCCEEEEEeCCce-EEEE----HHHhhcccccccCCCCcEEEEEEEecCC
Confidence 255555566 7788888883 3332 34777666533 1223599999987654
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=95.94 E-value=0.0035 Score=63.31 Aligned_cols=109 Identities=17% Similarity=0.138 Sum_probs=66.7
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCCHHHHHH--HHccCC--ce-----eeeecC-CCccchhchhcccCCC
Q 008429 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISR--ATCPMN--LS-----LAVVAE-LDDLTVGGLINGYGIE 170 (565)
Q Consensus 104 ~~givIdls~---l~~il~vd~~~~~v~Ve~Gv~~~~L~~--~l~~~G--l~-----~pv~p~-~~~~tvGG~i~ggg~g 170 (565)
..+.+||+++ |+.| +.+ ++.+++|+++++.+|.+ .+.++- +. +. .+. -+..||||.++++.
T Consensus 47 ~~~~lIdl~~i~eL~~I-~~~--~~~l~IGA~~t~~~l~~~~~~~~~~p~L~~a~~~ia-~~qiRN~gTiGGnl~~a~-- 120 (288)
T 1n62_C 47 TPEHLVDLRDIGDLVGI-REE--GTDVVIGAMTTQHALIGSDFLAAKLPIIRETSLLIA-DPQIRYMGTIGGNAANGD-- 120 (288)
T ss_dssp CCSEEEECTTCGGGSCE-EEE--TTEEEEETTCBHHHHHHCHHHHHHCHHHHHHHTTSS-CHHHHHHCBHHHHHHSCC--
T ss_pred CCCEEEECCCChhhcce-Eec--CCEEEEccCCcHHHHhcChHHHHHHHHHHHHHHHhC-CHHHHccccccchhccCC--
Confidence 4689999987 5665 554 45799999999999995 443321 10 11 111 12359999996532
Q ss_pred CCCcccccccceee-------EEEEEecCceEEEEcCCCCchhhhhhcccc-cCCCceEEEEEEEEEe
Q 008429 171 GSSHIYGLFSDTVV-------AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIP 230 (565)
Q Consensus 171 ~~s~~~G~~~d~V~-------~~evVladG~vv~~s~~~~~~dLf~a~~Gs-~G~lGIVt~~tl~l~p 230 (565)
..+|.+. .+++..++|+ .+... .|+|.+..-. ...--|||++.|...+
T Consensus 121 -------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~~----~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 121 -------PGNDMPALMQCLGAAYELTGPEGA-RIVAA----RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp -------TTCSHHHHHHHHTCEEEEEETTEE-EEEEH----HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred -------CchHHHHHHHHhCcEEEEEeCCcc-EEEEH----HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 1344443 6677888884 44433 3666554322 2233689999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=93.64 E-value=0.068 Score=54.29 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=64.5
Q ss_pred CCeEEEEcCCC---CCceEEeCCCcEEEEcCCCCHHHHHHHHccC-------------Cc-----eeeeecC-CCccchh
Q 008429 104 ARHFEVDLSAF---RNILDIDKDRMIAKVEPLVNMGQISRATCPM-------------NL-----SLAVVAE-LDDLTVG 161 (565)
Q Consensus 104 ~~givIdls~l---~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~~~-------------Gl-----~~pv~p~-~~~~tvG 161 (565)
....+||++++ +.| +. +++.+++|+++++.++.+.+.++ .+ .+. .+. -+..|||
T Consensus 51 ~~~~lIdl~~i~eL~~I-~~--~~~~l~IGA~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia-~~qiRN~aTiG 126 (305)
T 3nvz_B 51 LFPMIICPAWIPELNAV-EH--GPEGISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFA-GKQVKSVASLG 126 (305)
T ss_dssp CCSEEEECTTCGGGGCE-EE--CSSEEEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSS-CHHHHTTCBHH
T ss_pred CCCEEEECCCChhhcce-EE--CCCeEEEccCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhC-CHHHhCeeech
Confidence 46789999974 554 54 34679999999999999876531 01 111 121 2356999
Q ss_pred chhcccCCCCCCcccccccceee----EEEEEecCceEEEEcCCCCchhhhhhcccc-cCCCceEEEEEEEEEe
Q 008429 162 GLINGYGIEGSSHIYGLFSDTVV----AYEIVLADGQVVRATKDNEYKDLFYAIPWS-QGTLGLLVSAEIKLIP 230 (565)
Q Consensus 162 G~i~ggg~g~~s~~~G~~~d~V~----~~evVladG~vv~~s~~~~~~dLf~a~~Gs-~G~lGIVt~~tl~l~p 230 (565)
|.+++.. . .+...-.++ .+++..++|+ .+..-+ .|+|.+..-. ...--|||++.|...+
T Consensus 127 GNl~~a~-p-----~sD~~~~L~AldA~v~l~~~~G~-R~vp~~---~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 127 GNIITAS-P-----ISDLNPVFMASGTKLTIVSRGTR-RTVPMD---HTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp HHHHHCC-T-----TCSSHHHHHHHTCEEEEEETTEE-EEEECC---GGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred heeCCCC-C-----chHHHHHHHHcCCEEEEEcCCCc-EEEEee---hHhhcCcccccCCCCcEEEEEEecCCC
Confidence 9996532 1 122222222 5677788884 333321 1444433211 1222499999886433
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=93.47 E-value=0.043 Score=55.27 Aligned_cols=108 Identities=18% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCeEEEEcCC---CCCceEEeCCCcEEEEcCCCCHHHHHH--HHccCC--c-----eeeeecC-CCccchhchhcccCCC
Q 008429 104 ARHFEVDLSA---FRNILDIDKDRMIAKVEPLVNMGQISR--ATCPMN--L-----SLAVVAE-LDDLTVGGLINGYGIE 170 (565)
Q Consensus 104 ~~givIdls~---l~~il~vd~~~~~v~Ve~Gv~~~~L~~--~l~~~G--l-----~~pv~p~-~~~~tvGG~i~ggg~g 170 (565)
....+||+++ |+.| +.+ ++.+++|+++++.+|.+ .+.++- + .+. .+. -+..|+||.+++. .
T Consensus 46 ~~~~lIdl~~i~eL~~I-~~~--~~~l~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ia-s~qiRN~aTiGGNi~~a-~- 119 (288)
T 1t3q_C 46 YPSCLVDLRNVSELFEI-SQS--AGILSVGAMVTHFRNKTDPTVAKCVPILPKVLAHVA-HQAVRNRGTLGGSLAHA-D- 119 (288)
T ss_dssp CCSEEEECTTCGGGGCE-EEE--TTEEEEETTCBHHHHHHCHHHHHHCTHHHHHHTTSS-CHHHHTTCBHHHHHHHT-C-
T ss_pred CCCEEEECCCChhhcCe-EEc--CCEEEEcCCCcHHHHhcCHHHHHHHHHHHHHHHHhC-CHHHHcceechhhcccC-C-
Confidence 4678999998 4555 554 45799999999999986 333211 1 111 222 3556999999643 1
Q ss_pred CCCcccccccceee-------EEEEEecCceEEEEcCCCCchhhhhhccc-ccCCCceEEEEEEEEE
Q 008429 171 GSSHIYGLFSDTVV-------AYEIVLADGQVVRATKDNEYKDLFYAIPW-SQGTLGLLVSAEIKLI 229 (565)
Q Consensus 171 ~~s~~~G~~~d~V~-------~~evVladG~vv~~s~~~~~~dLf~a~~G-s~G~lGIVt~~tl~l~ 229 (565)
..+|.+. .+++..++|+ .+..- .|.|.+..- ....--|||++.|...
T Consensus 120 -------p~sD~~~~L~Al~A~v~l~~~~g~-R~vp~----~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 120 -------AGAEMPFLMATLGATMYIASSAGV-RSVSA----TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp -------TTCHHHHHHHHTTCEEEEEETTEE-EEEEH----HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred -------CcHHHHHHHHHcCcEEEEEcCCce-EEEEH----HHHhcCcccccCCCCCEEEEEEecCC
Confidence 1345544 6777788885 33332 255544321 1223358999988643
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=82.86 E-value=0.28 Score=49.51 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=60.2
Q ss_pred CCeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHH--Hcc-------CCceeeeecC-CCccchhchhcccCCCCCC
Q 008429 104 ARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRA--TCP-------MNLSLAVVAE-LDDLTVGGLINGYGIEGSS 173 (565)
Q Consensus 104 ~~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~--l~~-------~Gl~~pv~p~-~~~~tvGG~i~ggg~g~~s 173 (565)
....+||++++..+-.|..+++.+++|+++++.++.+. +.+ .=..+. .+. -+..||||.+++ +..
T Consensus 46 ~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~ia-s~qIRN~aTiGGNi~~-a~p--- 120 (296)
T 3hrd_C 46 KPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQIENHPFIRSHVRALYKAASQVG-SPQIRNLGTIGGNLST-SSV--- 120 (296)
T ss_dssp CCSEEEECTTCGGGCCEEECSSEEEEETTCBHHHHHHCHHHHHHCHHHHHHHHTSS-CHHHHHHCBHHHHHHH-TCT---
T ss_pred CCCeEEEcccChhhcceEEcCCeEEEccCCcHHHHHhChhhhhHhHHHHHHHHHhC-CHHHhcceehhhhhcc-CCC---
Confidence 46789999985332223334568999999999999752 111 101111 222 235699999964 322
Q ss_pred ccccccccee-----e--EEEEEecCceEEEEcCCCCchhhhhhcc----cccCCCceEEEEEEEEE
Q 008429 174 HIYGLFSDTV-----V--AYEIVLADGQVVRATKDNEYKDLFYAIP----WSQGTLGLLVSAEIKLI 229 (565)
Q Consensus 174 ~~~G~~~d~V-----~--~~evVladG~vv~~s~~~~~~dLf~a~~----Gs~G~lGIVt~~tl~l~ 229 (565)
.+|.+ + .+++..++|+ .+..- .|+|.+.. .....--|||++.|...
T Consensus 121 -----~sD~~~~LlAldA~v~l~~~~g~-R~vp~----~dF~~g~~~~~~t~L~~~Eil~~I~iP~~ 177 (296)
T 3hrd_C 121 -----AGDGVSAMTTLDATVVLESVRGT-RQMKL----TDFFDGEGFKRRNALEADEIMTEVIIDRP 177 (296)
T ss_dssp -----TCHHHHHHHHTTCEEEEEETTEE-EEEEH----HHHHHCCSSSSSSSCCTTCEEEEEEEECC
T ss_pred -----chHHHHHHHHhCcEEEEEcCCce-EEEEH----HHHhcccccccccCCCCCcEEEEEEecCC
Confidence 22221 1 3455567773 33322 25554432 11223349999987543
No 35
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=75.20 E-value=2.3 Score=51.43 Aligned_cols=37 Identities=0% Similarity=-0.084 Sum_probs=28.6
Q ss_pred CCeEEEEcCCC---CCceEEeCCCcEEEEcCCCCHHHHHHHHc
Q 008429 104 ARHFEVDLSAF---RNILDIDKDRMIAKVEPLVNMGQISRATC 143 (565)
Q Consensus 104 ~~givIdls~l---~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~ 143 (565)
....+||++++ +.| +.+ ++.+++|+++++.+|.+.+.
T Consensus 274 ~~~~lIdl~~i~EL~~I-~~~--~~~l~IGA~vtl~~l~~~l~ 313 (1332)
T 3unc_A 274 LFPMIICPAWIPELNAV-EHG--PEGISFGAACALSSVEKTLL 313 (1332)
T ss_dssp CCSEEEECTTCGGGGCE-EEC--SSEEEEETTCBHHHHHHHHH
T ss_pred CCCeEEEcCCCHHhCce-EEe--CCEEEEEecChHHHHHHHHH
Confidence 45679999985 444 544 45799999999999998764
No 36
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=60.20 E-value=9.4 Score=40.45 Aligned_cols=54 Identities=11% Similarity=0.190 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHcCCc----ccc-cccccCCHHHHHhhcCh---hHHHHHHHhcCCCCCChh
Q 008429 476 AEAVRKMEQWLIENGGF----QPQ-YAVSELSEKNFWRMFDA---DLYEKCRKKYKAVGTFMS 530 (565)
Q Consensus 476 ~~~~r~lE~~v~~~gG~----k~l-ya~~~~~~~eF~~~y~~---~~y~~lR~ky~~~~~~~~ 530 (565)
.++.+.+++.+....++ +|+ |+|.. ..+...+.|+. +...+||+||||++.|.+
T Consensus 389 ~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~-~~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~ 450 (459)
T 2bvf_A 389 PELARELDAALLRAGVTTSGFGLLNNNSEV-TAEMVAEVYKPEVYSRLAAVKREYDPENRFRH 450 (459)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCGGGCSSC-CHHHHHHHHCHHHHHHHHHHHHHHCTTCCCCS
T ss_pred HHHHHHHHHHhcccccCCCCCeeeCCCCCc-chHHHHHHhCcchHHHHHHHHHHhCcccccCC
Confidence 67899999999998753 222 44432 45566778853 577789999999998854
No 37
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=48.64 E-value=31 Score=41.75 Aligned_cols=39 Identities=3% Similarity=0.045 Sum_probs=29.0
Q ss_pred CeEEEEcCCCCCceEEeCCCcEEEEcCCCCHHHHHHHHc
Q 008429 105 RHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATC 143 (565)
Q Consensus 105 ~givIdls~l~~il~vd~~~~~v~Ve~Gv~~~~L~~~l~ 143 (565)
-.++|++++...+-.+..++..+++|++|++.++.+.|.
T Consensus 282 ~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~~~l~ 320 (1335)
T 3zyv_A 282 YPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKNVLS 320 (1335)
T ss_dssp CSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHHHHHH
T ss_pred CCeEEEcCcchhHheEEecCCEEEEcccCcHHHHHHHHH
Confidence 568999887443333445556799999999999988774
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=45.71 E-value=31 Score=37.06 Aligned_cols=22 Identities=5% Similarity=-0.076 Sum_probs=19.8
Q ss_pred ceeeEEeecc--ccHHHHHHHHhc
Q 008429 392 HVIQDMLVPL--YKVGDALEWQHR 413 (565)
Q Consensus 392 ~viqDv~vP~--~~l~e~l~~l~~ 413 (565)
.+..|++||. ++++++++.+++
T Consensus 391 ~~~~d~~vp~~~~~l~~~~~~~~~ 414 (520)
T 1wvf_A 391 SMWFAPVSEARGSECKKQAAMAKR 414 (520)
T ss_dssp EEEECBEEESCHHHHHHHHHHHHH
T ss_pred eEEeccccCCCHHHHHHHHHHHHH
Confidence 5678999999 999999999977
No 39
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=40.97 E-value=11 Score=25.64 Aligned_cols=20 Identities=25% Similarity=0.424 Sum_probs=15.5
Q ss_pred ccCCHHHHHhhcC--hhHHHHH
Q 008429 499 SELSEKNFWRMFD--ADLYEKC 518 (565)
Q Consensus 499 ~~~~~~eF~~~y~--~~~y~~l 518 (565)
.|+|.+||.++|+ ++.|.+|
T Consensus 1 ~yLsd~dF~~vFgmsr~eF~~L 22 (37)
T 1und_A 1 XYLSEQDFVSVFGITRGQFAAL 22 (37)
T ss_dssp -CCCHHHHHHHHSSCHHHHHHS
T ss_pred CCCCHHHHHHHHCcCHHHHHHC
Confidence 4889999999997 4677654
No 40
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=34.44 E-value=17 Score=36.91 Aligned_cols=59 Identities=17% Similarity=0.111 Sum_probs=38.1
Q ss_pred CCeEEEEcCCC---CCceEEeCCCcEEEEcCCCCHHHHHHH--HccC-------CceeeeecC-CCccchhchhc
Q 008429 104 ARHFEVDLSAF---RNILDIDKDRMIAKVEPLVNMGQISRA--TCPM-------NLSLAVVAE-LDDLTVGGLIN 165 (565)
Q Consensus 104 ~~givIdls~l---~~il~vd~~~~~v~Ve~Gv~~~~L~~~--l~~~-------Gl~~pv~p~-~~~~tvGG~i~ 165 (565)
....+||++++ +.| +.+++ +.+++|+++++.+|.+. +.++ =..+ ..|. -+..||||.++
T Consensus 46 ~p~~lIdi~~i~eL~~I-~~~~~-~~l~IGA~vt~~~l~~~~~~~~~~p~L~~a~~~i-as~qIRN~aTiGGNl~ 117 (324)
T 1rm6_B 46 HPAALVDLTGIDGLATI-STLAD-GSLRIGAGATLEAIAEHDAIRTTWPALAQAAESV-AGPTHRAAATLGGNLC 117 (324)
T ss_dssp CCSEEEECTTSTTTTCE-EECTT-SCEEEETTCBHHHHHHCHHHHHHSHHHHHHHHHS-SCHHHHHHCBHHHHHT
T ss_pred CCCEEEECCCChhhcce-EECCC-CeEEEccCCcHHHHHhChHHHHHHHHHHHHHHHh-CCHHHcceeEeeeecc
Confidence 46889999875 555 55433 36999999999999874 2111 0111 1232 24569999995
No 41
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=33.00 E-value=28 Score=37.23 Aligned_cols=54 Identities=9% Similarity=0.028 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHcC-Ccc-cc---ccc-------------ccCCHHHHHhhcChhHH---HHHHHhcCCCCCCh
Q 008429 476 AEAVRKMEQWLIENG-GFQ-PQ---YAV-------------SELSEKNFWRMFDADLY---EKCRKKYKAVGTFM 529 (565)
Q Consensus 476 ~~~~r~lE~~v~~~g-G~k-~l---ya~-------------~~~~~~eF~~~y~~~~y---~~lR~ky~~~~~~~ 529 (565)
.++.|++-+.+...- |.. -- |+| .|...+.|.+.|-++.| .+||+||||++.|.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~IK~kyDP~nvF~ 488 (500)
T 3tsh_A 414 LSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAITKGKVDPTDYFR 488 (500)
T ss_dssp HHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHHHHHhCcccccC
Confidence 567777777776542 211 11 222 22234556567766545 56788999999884
No 42
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=28.16 E-value=28 Score=37.09 Aligned_cols=54 Identities=9% Similarity=0.098 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCc----c-cccccccCCHHHHHhhcChh---HHHHHHHhcCCCCCCh
Q 008429 476 AEAVRKMEQWLIENGGF----Q-PQYAVSELSEKNFWRMFDAD---LYEKCRKKYKAVGTFM 529 (565)
Q Consensus 476 ~~~~r~lE~~v~~~gG~----k-~lya~~~~~~~eF~~~y~~~---~y~~lR~ky~~~~~~~ 529 (565)
.++.|++=+.+.+.-+. - -=|.|..++.+++.+.|-++ +-.+||+||||++.|.
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~~~~~~~~yyg~n~~RL~~vK~kyDP~n~F~ 464 (473)
T 3rja_A 403 FKFLDGWVNSVTKALPKSDWGMYINYADPRMDRDYATKVYYGENLARLQKLKAKFDPTDRFY 464 (473)
T ss_dssp HHHHHHHHHHHHTTSCGGGEECCGGGCCCSSCHHHHHHHHHGGGHHHHHHHHHHHCTTCTTC
T ss_pred HHHHHHHHHHHHhhCCCCCCceEecCCCccccchhHHHHHHHHHHHHHHHHhhccCchhhCC
Confidence 56666554444332211 1 12445555557888888664 4456778999998774
No 43
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=26.43 E-value=63 Score=35.27 Aligned_cols=39 Identities=10% Similarity=-0.099 Sum_probs=30.9
Q ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCCCceeeecCCCceeecccccc
Q 008429 54 SYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVD 100 (565)
Q Consensus 54 ~~~pa~~~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 100 (565)
...|.....|+++++++++++.++. .+.|+++.|++++.
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~--------~~~~v~~~GgGt~~ 81 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVT--------ADKIILMQAANTGL 81 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHH--------TTCEEEEESSCCCS
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHH--------cCCCEEEECCCcCC
Confidence 3568888999999999999998874 55678888877764
No 44
>1qzp_A Dematin; villin headpiece, actin binding domain, protein binding; NMR {Homo sapiens} SCOP: a.14.1.1 PDB: 1zv6_A
Probab=25.67 E-value=29 Score=26.83 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=16.6
Q ss_pred cccCCHHHHHhhcC--hhHHHHH
Q 008429 498 VSELSEKNFWRMFD--ADLYEKC 518 (565)
Q Consensus 498 ~~~~~~~eF~~~y~--~~~y~~l 518 (565)
..|+|.+||.++|+ ++.|.+|
T Consensus 31 E~yLsdedF~~vFgmsr~eF~~L 53 (68)
T 1qzp_A 31 ERHLSAEDFSRVFAMSPEEFGKL 53 (68)
T ss_dssp GGGBCHHHHHHHSSSCHHHHHHS
T ss_pred HhhCCHHHHHHHHCcCHHHHHHC
Confidence 37899999999997 4677654
No 45
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=25.58 E-value=31 Score=36.95 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=21.9
Q ss_pred cccccCCHHHHH-hhcCh--hHHHHHHHhcCCCCCCh
Q 008429 496 YAVSELSEKNFW-RMFDA--DLYEKCRKKYKAVGTFM 529 (565)
Q Consensus 496 ya~~~~~~~eF~-~~y~~--~~y~~lR~ky~~~~~~~ 529 (565)
|+|.....+++. ..|+. ++-.+||+||||++.|.
T Consensus 435 yad~~~~~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~ 471 (503)
T 1zr6_A 435 YADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFG 471 (503)
T ss_dssp GCCTTCCHHHHHHHHHGGGHHHHHHHHHHHCTTCTTC
T ss_pred CCCcccccchHHHHHHHhHHHHHHHHHHHhCchhhcC
Confidence 556655533443 44543 55566899999998775
No 46
>1yu8_X Villin; alpha helix, 3-10 helix, structural protein; 1.45A {Gallus gallus} SCOP: a.14.1.1 PDB: 1qqv_A 1yu5_X 2rjx_A 2rjy_A 1yu7_X 2rjv_A 2rjw_A 3nkj_A 3myc_A 3mya_A 3mye_X 1unc_A
Probab=21.48 E-value=30 Score=26.74 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=16.6
Q ss_pred ccccCCHHHHHhhcC--hhHHHHH
Q 008429 497 AVSELSEKNFWRMFD--ADLYEKC 518 (565)
Q Consensus 497 a~~~~~~~eF~~~y~--~~~y~~l 518 (565)
-..|+|.+||.++|+ ++.|.+|
T Consensus 29 lE~yLsdedF~~vFgms~~eF~~L 52 (67)
T 1yu8_X 29 KENHLSDEDFKAVFGMTRSAFANL 52 (67)
T ss_dssp GGGGSCHHHHHHHHSSCHHHHHTS
T ss_pred HHhcCCHHHHHHHHCcCHHHHHHC
Confidence 348899999999997 4666543
Done!