BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008431
(565 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 29/348 (8%)
Query: 226 YFVNSQNDEISKLHFVNNDREMFELNDLLRAS-----AEVLGSGSFGSSYKAVLLTGPAM 280
+F + +E ++H R F L +L AS +LG G FG YK L G +
Sbjct: 8 HFFDVPAEEDPEVHLGQLKR--FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 281 VVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANL 339
VKR ++ G E F + + H NLL L F E+LLV ++ NGS+A+
Sbjct: 66 AVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC 125
Query: 340 LHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF-PGVTLPHGHLKSSNVLLDNAYEPL 398
L R QP LDWP R +I G A+GLAYL+ P + H +K++N+LLD +E +
Sbjct: 126 LR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII--HRDVKAANILLDEEFEAV 182
Query: 399 LTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ D+ L +++ + + + + +PE+ T + KTDV+ G+++LEL+TG+
Sbjct: 183 VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 242
Query: 454 ANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNA 513
+ + L WV +++E+ + D D++G E E+ +L+++ + C + +
Sbjct: 243 FDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQSSP 301
Query: 514 ERRWDLREAVEKIMELKERDNDNEDYSSYASEDYVYSSRAMTDEDFSF 561
R + E V + E D E + + E+ M +DF++
Sbjct: 302 MERPKMSEVVRML----EGDGLAERWEEWQKEE-------MFRQDFNY 338
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 162/332 (48%), Gaps = 22/332 (6%)
Query: 227 FVNSQNDEISKLHFVNNDREMFELNDLLRAS-----AEVLGSGSFGSSYKAVLLTGPAMV 281
F + +E ++H R F L +L AS +LG G FG YK L G +
Sbjct: 1 FFDVPAEEDPEVHLGQLKR--FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVA 58
Query: 282 VKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLL 340
VKR ++ G E F + + H NLL L F E+LLV ++ NGS+A+ L
Sbjct: 59 VKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 118
Query: 341 HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF-PGVTLPHGHLKSSNVLLDNAYEPLL 399
R QP LDWP R +I G A+GLAYL+ P + H +K++N+LLD +E ++
Sbjct: 119 R-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII--HRDVKAANILLDEEFEAVV 175
Query: 400 TDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPA 454
D+ L +++ + + + + +PE+ T + KTDV+ G+++LEL+TG+
Sbjct: 176 GDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
Query: 455 NYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAE 514
+ + L WV +++E+ + D D++G E E+ +L+++ + C + +
Sbjct: 236 DLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE-EVEQLIQVALLCTQSSPM 294
Query: 515 RRWDLREAVEKIMELKERDNDNEDYSSYASED 546
R + E V + E D E + + E+
Sbjct: 295 ERPKMSEVVRML----EGDGLAERWEEWQKEE 322
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 18/235 (7%)
Query: 229 NSQNDEISKLHFVNNDREMFELNDLLRASAE-----VLGSGSFGSSYKAVLLTGPAMVVK 283
NS ND +S + V + L DL A+ ++G G FG YK VL G + +K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 284 RFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVR 343
R S+ G E+F + L HP+L+ LI F + E +L+ ++ NG+L L+
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 344 RAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYA 403
P + W RL+I G A+GL YL+ + H +KS N+LLD + P +TD+
Sbjct: 130 DLPTM-SMSWEQRLEICIGAARGLHYLHTR----AIIHRDVKSINILLDENFVPKITDFG 184
Query: 404 LVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGK 451
+ E Q H+ + Y PE+ +T K+DV+S G+++ E+L +
Sbjct: 185 -ISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 18/235 (7%)
Query: 229 NSQNDEISKLHFVNNDREMFELNDLLRASAE-----VLGSGSFGSSYKAVLLTGPAMVVK 283
NS ND +S + V + L DL A+ ++G G FG YK VL G + +K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 284 RFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVR 343
R S+ G E+F + L HP+L+ LI F + E +L+ ++ NG+L L+
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 344 RAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYA 403
P + W RL+I G A+GL YL+ + H +KS N+LLD + P +TD+
Sbjct: 130 DLPTM-SMSWEQRLEICIGAARGLHYLHTR----AIIHRDVKSINILLDENFVPKITDFG 184
Query: 404 LVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGK 451
+ E Q H+ + Y PE+ +T K+DV+S G+++ E+L +
Sbjct: 185 -ISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG----KEDFHEHMTRLGSLSHPNLLPLIA 316
+G G FG YK + + VK+ M ++ K+ F + + + H NL+ L+
Sbjct: 39 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F ++ LV ++PNGSL + L G P L W +R KI +G A G+ +L++
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTD 429
H +KS+N+LLD A+ ++D+ L +++ AQ M AY +PE + +
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXXRIVGTTAYMAPEALRGE 210
Query: 430 GVTRKTDVWSLGILILELLTGKFPA 454
+T K+D++S G+++LE++TG PA
Sbjct: 211 -ITPKSDIYSFGVVLLEIITG-LPA 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG----KEDFHEHMTRLGSLSHPNLLPLIA 316
+G G FG YK + + VK+ M ++ K+ F + + + H NL+ L+
Sbjct: 39 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F ++ LV ++PNGSL + L G P L W +R KI +G A G+ +L++
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFLHENHH- 154
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTD 429
H +KS+N+LLD A+ ++D+ L +++ AQ M AY +PE + +
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXSRIVGTTAYMAPEALRGE 210
Query: 430 GVTRKTDVWSLGILILELLTGKFPA 454
+T K+D++S G+++LE++TG PA
Sbjct: 211 -ITPKSDIYSFGVVLLEIITG-LPA 233
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 21/205 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG----KEDFHEHMTRLGSLSHPNLLPLIA 316
+G G FG YK + + VK+ M ++ K+ F + + + H NL+ L+
Sbjct: 33 MGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F ++ LV ++PNGSL + L G P L W +R KI +G A G+ +L++
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSC--LDGTPPLSWHMRCKIAQGAANGINFLHENHH- 148
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTD 429
H +KS+N+LLD A+ ++D+ L +++ AQ M AY +PE + +
Sbjct: 149 ---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVMXXRIVGTTAYMAPEALRGE 204
Query: 430 GVTRKTDVWSLGILILELLTGKFPA 454
+T K+D++S G+++LE++TG PA
Sbjct: 205 -ITPKSDIYSFGVVLLEIITG-LPA 227
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 262 GSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG----KEDFHEHMTRLGSLSHPNLLPLIAF 317
G G FG YK + + VK+ M ++ K+ F + + H NL+ L+ F
Sbjct: 31 GEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
++ LV + PNGSL + L G P L W R KI +G A G+ +L++
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSC--LDGTPPLSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ-------LHMVAYKSPEFNQTDG 430
H +KS+N+LLD A+ ++D+ L +++ AQ + AY +PE + +
Sbjct: 146 --IHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVXXSRIVGTTAYXAPEALRGE- 201
Query: 431 VTRKTDVWSLGILILELLTGKFPA 454
+T K+D++S G+++LE++TG PA
Sbjct: 202 ITPKSDIYSFGVVLLEIITG-LPA 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 28/212 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSN----VGKEDFHEHMTRLGSLSHPNLLPL 314
E++G G FG Y+A + G + VK R + E+ + L HPN++ L
Sbjct: 13 EIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
++ LV +F G L +L +R P ++W ++ +A+G+ YL+ E
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDE- 124
Query: 375 PGVTLPHGHLKSSNVLLDNAYEP--------LLTDYALVPIVNKEHAQLHM-----VAYK 421
V + H LKSSN+L+ E +TD+ L + H M A+
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA---REWHRTTKMSAAGAYAWM 181
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + ++ +DVWS G+L+ ELLTG+ P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 151
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 152 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 150 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 148
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 149 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 169
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 170 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 272
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH--------EHMTRLGSLSHPN 310
E +G+GSFG+ ++A G + VK + +DFH + + L HPN
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILME------QDFHAERVNEFLREVAIMKRLRHPN 95
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ + + +V++++ GSL LLH A Q LD RL + VAKG+ YL
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYL 153
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ P + H +LKS N+L+D Y + D+ L + A + +PE
Sbjct: 154 HNRNPPIV--HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL 211
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANA------------DLATWVNSV 474
+ + K+DV+S G+++ EL T + P L + A +L V ++
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271
Query: 475 VREEWTGEVFDK 486
+ WT E + +
Sbjct: 272 IEGCWTNEPWKR 283
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 151
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 152 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 146
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 147 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 249
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 143
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 144 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 246
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 151 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 170
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE+ +H V + + E
Sbjct: 171 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 273
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKYLAS 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE +H V + + E
Sbjct: 151 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 253
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 35/252 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH--------EHMTRLGSLSHPN 310
E +G+GSFG+ ++A G + VK + +DFH + + L HPN
Sbjct: 43 EKIGAGSFGTVHRAEW-HGSDVAVKILME------QDFHAERVNEFLREVAIMKRLRHPN 95
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ + + +V++++ GSL LLH A Q LD RL + VAKG+ YL
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYDVAKGMNYL 153
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ P + H LKS N+L+D Y + D+ L + A + +PE
Sbjct: 154 HNRNPPIV--HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVL 211
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANA------------DLATWVNSV 474
+ + K+DV+S G+++ EL T + P L + A +L V ++
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAI 271
Query: 475 VREEWTGEVFDK 486
+ WT E + +
Sbjct: 272 IEGCWTNEPWKR 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 40/289 (13%)
Query: 197 ETQETKALKKYGANNYHDMGQNEIQSSDCYFVNSQNDEISKLHFVNNDREMFELNDLLRA 256
E T KK G+ N + G N + D +N + + + + + N
Sbjct: 41 EELSTSLYKKAGSENLYFQGANTVHI-DLSALNPELVQAVQHVVIGPSSLIVHFN----- 94
Query: 257 SAEVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNL 311
EV+G G FG Y LL VK +++++G+ F + SHPN+
Sbjct: 95 --EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 312 LPLIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
L L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFL 208
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKS 422
+ H L + N +LD + + D+ L + +KE +H V + +
Sbjct: 209 ASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
E QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFLAS 152
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L +++KE +H V + + E
Sbjct: 153 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSG 77
L+ L+ +N F GP+P + +L+ L L+ NKFTGEIP D L + L+ NHF G
Sbjct: 246 LKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 78 QIPKSXXXXXXXXXXXXXXXSFQGKIPD---FPLAHLTLLDLSYNQLVGRIPDTLSNFDA 134
+P +F G++P + L +LDLS+N+ G +P++L+N A
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 135 T 135
+
Sbjct: 366 S 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 64/161 (39%), Gaps = 32/161 (19%)
Query: 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSV-------------------------- 35
N G + +DTL ++ GL+ L N F G +P
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 385
Query: 36 ---GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSXXXXXXXXXX 92
K TL+ LYL N FTG+IP + +L +HL+ N+ SG IP S
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 93 XXXXXSFQGKIPD--FPLAHLTLLDLSYNQLVGRIPDTLSN 131
+G+IP + L L L +N L G IP LSN
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAG-MDQLKKVHLARNHFS 76
L+ L+ N G + + L L +S N F+ IP F G L+ + ++ N S
Sbjct: 177 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP---FLGDCSALQHLDISGNKLS 233
Query: 77 GQIPKSXXXXXXXXXXXXXXXSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLS 130
G ++ F G IP PL L L L+ N+ G IPD LS
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLS 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 26 NSFDGPMPSVGKLTLRALY---LSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI--- 79
N+F G +P L +R L LS N+F+GE+P L + L+ N+FSG I
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 80 ----PKSXXXXXXXXXXXXXXXSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129
PK+ F GKIP + L L LS+N L G IP +L
Sbjct: 385 LCQNPKN-----TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 435
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 28/124 (22%)
Query: 56 SDAFAGMDQLKKVHLARNHFSGQIPKSXXXXXXXXXXXXXXXSFQGKIPD--FPLAHLTL 113
S F + + ++ N SG IPK G IPD L L +
Sbjct: 622 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 681
Query: 114 LDLSYNQLVGRIPDTLS--------------------------NFDATSFQGNKGLCGKP 147
LDLS N+L GRIP +S F F N GLCG P
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 741
Query: 148 LEAC 151
L C
Sbjct: 742 LPRC 745
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 26 NSFDGPMPS--VGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSX 83
N G +PS L + LS N+ TGEIP ++ L + L+ N FSG IP
Sbjct: 473 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK-WIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 84 XXXXXXXXXXXXXXSFQGKIP 104
F G IP
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIP 552
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSG 77
L+ L+ +N F GP+P + +L+ L L+ NKFTGEIP D L + L+ NHF G
Sbjct: 249 LKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 78 QIPKSXXXXXXXXXXXXXXXSFQGKIPD---FPLAHLTLLDLSYNQLVGRIPDTLSNFDA 134
+P +F G++P + L +LDLS+N+ G +P++L+N A
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 135 T 135
+
Sbjct: 369 S 369
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 64/161 (39%), Gaps = 32/161 (19%)
Query: 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSV-------------------------- 35
N G + +DTL ++ GL+ L N F G +P
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388
Query: 36 ---GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSXXXXXXXXXX 92
K TL+ LYL N FTG+IP + +L +HL+ N+ SG IP S
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPP-TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 93 XXXXXSFQGKIPD--FPLAHLTLLDLSYNQLVGRIPDTLSN 131
+G+IP + L L L +N L G IP LSN
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAG-MDQLKKVHLARNHFS 76
L+ L+ N G + + L L +S N F+ IP F G L+ + ++ N S
Sbjct: 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP---FLGDCSALQHLDISGNKLS 236
Query: 77 GQIPKSXXXXXXXXXXXXXXXSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLS 130
G ++ F G IP PL L L L+ N+ G IPD LS
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLS 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 26 NSFDGPMPSVGKLTLRALY---LSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI--- 79
N+F G +P L +R L LS N+F+GE+P L + L+ N+FSG I
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 80 ----PKSXXXXXXXXXXXXXXXSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129
PK+ F GKIP + L L LS+N L G IP +L
Sbjct: 388 LCQNPKN-----TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 42/124 (33%), Gaps = 28/124 (22%)
Query: 56 SDAFAGMDQLKKVHLARNHFSGQIPKSXXXXXXXXXXXXXXXSFQGKIPD--FPLAHLTL 113
S F + + ++ N SG IPK G IPD L L +
Sbjct: 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684
Query: 114 LDLSYNQLVGRIPDTLS--------------------------NFDATSFQGNKGLCGKP 147
LDLS N+L GRIP +S F F N GLCG P
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744
Query: 148 LEAC 151
L C
Sbjct: 745 LPRC 748
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 26 NSFDGPMPS--VGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSX 83
N G +PS L + LS N+ TGEIP ++ L + L+ N FSG IP
Sbjct: 476 NDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK-WIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 84 XXXXXXXXXXXXXXSFQGKIP 104
F G IP
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIP 555
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFLAS 152
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE +H V + + E
Sbjct: 153 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 255
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFLAS 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE +H V + + E
Sbjct: 150 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 252
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFLAS 151
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE +H V + + E
Sbjct: 152 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 29/222 (13%)
Query: 246 EMFELNDLLRASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLG 304
+F +DL+ EVLG G FG + K TG MV+K + + F + + +
Sbjct: 5 RIFRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR 62
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
L HPN+L I Y+ + +++++ G+L + ++ Q W R+ K +A
Sbjct: 63 CLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI--IKSMDSQ--YPWSQRVSFAKDIA 118
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----- 419
G+AYL+ + + H L S N L+ ++ D+ L ++ E Q +
Sbjct: 119 SGMAYLH----SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174
Query: 420 -------------YKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ +PE K DV+S GI++ E++
Sbjct: 175 DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFLAS 151
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE +H V + + E
Sbjct: 152 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 254
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPNLLP 313
EV+G G FG Y LL VK +++++G+ F + SHPN+L
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 314 LIAFYYRKE-EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L+ R E L+V ++ +G L N +R P + I + VAKG+ +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNF--IRNETHNPTVKDLIGFGL--QVAKGMKFLAS 156
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLH-------MVAYKSPE 424
+ H L + N +LD + + D+ L + +KE +H V + + E
Sbjct: 157 K----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
QT T K+DVWS G+L+ EL+T P YL QG+
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR 259
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSG FG + L + +K R+ + +EDF E + LSHP L+ L
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ LV++F+ +G L++ L +R L + V +G+AYL + +
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE----ACVI 126
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ ++D+ + V + V + SPE + K+
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS G+L+ E+ + GK P
Sbjct: 187 DVWSFGVLMWEVFSEGKIP 205
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG + + VK + + + F E + +L H L+ L A R
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+E ++++++ GSL + L G+ L P + +A+G+AY+ ++
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK----NYI 132
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGVTRK 434
H L+++NVL+ + + D+ L ++ +E A+ + + +PE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIK 191
Query: 435 TDVWSLGILILELLT-GKFP 453
+DVWS GIL+ E++T GK P
Sbjct: 192 SDVWSFGILLYEIVTYGKIP 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSG FG + L + +K R+ + +EDF E + LSHP L+ L
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ LV +F+ +G L++ L +R L + V +G+AYL + +
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE----ACVI 128
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ ++D+ + V + V + SPE + K+
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS G+L+ E+ + GK P
Sbjct: 189 DVWSFGVLMWEVFSEGKIP 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 33/209 (15%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFH---EHMTRLGSLSHPN 310
+VLGSG FG+ +K V + + +K S G++ F +HM +GSL H +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 76
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG----LDWPIRLKIIKGVAKG 366
++ L+ +L V+ ++P GSL + HVR+ G G L+W ++ +AKG
Sbjct: 77 IVRLLGLCPGSSLQL-VTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQ------IAKG 127
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP--- 423
+ YL + + H +L + NVLL + + + D+ + ++ + QL K+P
Sbjct: 128 MYYLEEH----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 424 ---EFNQTDGVTRKTDVWSLGILILELLT 449
E T ++DVWS G+ + EL+T
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 29/207 (14%)
Query: 259 EVLGSGSFGSSYKAVLLT-GPAMVVKRFRQM--SNVGKEDFH---EHMTRLGSLSHPNLL 312
+VLGSG FG+ +K V + G ++ + ++ G++ F +HM +GSL H +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
L+ +L V+ ++P GSL + HVR+ G G L+W ++ +AKG+
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQ------IAKGMY 147
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP----- 423
YL + + H +L + NVLL + + + D+ + ++ + QL K+P
Sbjct: 148 YLEEH----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 424 -EFNQTDGVTRKTDVWSLGILILELLT 449
E T ++DVWS G+ + EL+T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSG FG + L + +K R+ + +EDF E + LSHP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ LV +F+ +G L++ L +R L + V +G+AYL + ++
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE----ASVI 125
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ ++D+ + V + V + SPE + K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS G+L+ E+ + GK P
Sbjct: 186 DVWSFGVLMWEVFSEGKIP 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSG FG + L + +K R+ + +EDF E + LSHP L+ L
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ LV +F+ +G L++ L +R L + V +G+AYL + +
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE----ACVI 125
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ ++D+ + V + V + SPE + K+
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS G+L+ E+ + GK P
Sbjct: 186 DVWSFGVLMWEVFSEGKIP 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 261 LGSGSFGS----------SYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHM----TRLGSL 306
LGSG++G S KA+ + + K N E FHE + + L SL
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 307 SHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKG 366
HPN++ L + K+ LV++F G L + + D I+K + G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-----FEQIINRHKFDECDAANIMKQILSG 158
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHA---QLHMVAY 420
+ YL+K + H +K N+LL+N L + D+ L +K++ +L Y
Sbjct: 159 ICYLHKH----NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + K DVWS G+++ LL G P
Sbjct: 215 IAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSG FG + L + +K R+ + +EDF E + LSHP L+ L
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ LV +F+ +G L++ L +R L + V +G+AYL + +
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE----ACVI 123
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ ++D+ + V + V + SPE + K+
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS G+L+ E+ + GK P
Sbjct: 184 DVWSFGVLMWEVFSEGKIP 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG + A + VK + S + E F + +L H L+ L A
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
KE ++++F+ GSL + L QP P + +A+G+A++ +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIEQR----NYI 306
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGVTRK 434
H L+++N+L+ + + D+ L ++ +E A+ + + +PE T K
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIK 365
Query: 435 TDVWSLGILILELLT-GKFP 453
+DVWS GIL++E++T G+ P
Sbjct: 366 SDVWSFGILLMEIVTYGRIP 385
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG + + VK + + + F E + +L H L+ L A +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+E ++++F+ GSL + L G+ L P + +A+G+AY+ ++
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERK----NYI 131
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGVTRK 434
H L+++NVL+ + + D+ L ++ +E A+ + + +PE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIK 190
Query: 435 TDVWSLGILILELLT-GKFP 453
++VWS GIL+ E++T GK P
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG + A + VK + S + E F + +L H L+ L A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
KE ++++F+ GSL + L QP P + +A+G+A++ +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIEQR----NYI 133
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGVTRK 434
H L+++N+L+ + + D+ L ++ +E A+ + + +PE T K
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIK 192
Query: 435 TDVWSLGILILELLT-GKFP 453
+DVWS GIL++E++T G+ P
Sbjct: 193 SDVWSFGILLMEIVTYGRIP 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 35/236 (14%)
Query: 231 QNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSN 290
++ ++++L F ++ ++F +DL +G GSFG+ Y A + +V ++MS
Sbjct: 39 KDPDVAELFFKDDPEKLF--SDLRE-----IGHGSFGAVYFARDVRNSEVVA--IKKMSY 89
Query: 291 VGKE------DFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRR 344
GK+ D + + L L HPN + Y R+ LV ++ GS ++LL V +
Sbjct: 90 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK 148
Query: 345 APGQPGLDWPIRLK-IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYA 403
P Q + + + G +GLAYL+ + H +K+ N+LL L D+
Sbjct: 149 KPLQE-----VEIAAVTHGALQGLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFG 199
Query: 404 LVPIVNKEHAQLHMVAYKSPEF------NQTDGVTRKTDVWSLGILILELLTGKFP 453
I+ + + + +PE Q DG K DVWSLGI +EL K P
Sbjct: 200 SASIMAPANXFVGTPYWMAPEVILAMDEGQYDG---KVDVWSLGITCIELAERKPP 252
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG + A + VK + S + E F + +L H L+ L A
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
KE ++++F+ GSL + L QP P + +A+G+A++ +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIEQR----NYI 300
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSL 440
H L+++N+L+ + + D+ L + K + + +PE T K+DVWS
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAK-----FPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 441 GILILELLT-GKFP 453
GIL++E++T G+ P
Sbjct: 356 GILLMEIVTYGRIP 369
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 44/239 (18%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNLLPLIA 316
E++G G +G+ YK L P + VK F S +++F +++ R+ + H N+ I
Sbjct: 19 ELIGRGRYGAVYKGSLDERP-VAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 317 FYYR-----KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
R + E LLV ++ PNGSL L + + DW ++ V +GLAYL+
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLH 128
Query: 372 KEFP-----GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------------NKEHAQ 414
E P + H L S NVL+ N +++D+ L + N ++
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 415 LHMVAYKSPE-------FNQTDGVTRKTDVWSLGILILELL---TGKFPANYLAQGKGA 463
+ + Y +PE + ++ D+++LG++ E+ T FP + + + A
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG GS+GS YKA+ TG + +K+ S++ ++ + ++ + P+++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGS 92
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y++ + +V ++ GS+++++ +R L I++ KGL YL+ +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNK----TLTEDEIATILQSTLKGLEYLH----FM 144
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTR 433
H +K+ N+LL+ L D+ + + A+ + V + +PE Q G
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 434 KTDVWSLGILILELLTGKFP 453
D+WSLGI +E+ GK P
Sbjct: 205 VADIWSLGITAIEMAEGKPP 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 35/233 (15%)
Query: 234 EISKLHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGK 293
++++L F ++ ++F +DL +G GSFG+ Y A + +V ++MS GK
Sbjct: 3 DVAELFFKDDPEKLF--SDLRE-----IGHGSFGAVYFARDVRNSEVVA--IKKMSYSGK 53
Query: 294 E------DFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG 347
+ D + + L L HPN + Y R+ LV ++ GS ++LL V + P
Sbjct: 54 QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPL 112
Query: 348 QPGLDWPIRLK-IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
Q + + + G +GLAYL+ + H +K+ N+LL L D+
Sbjct: 113 QE-----VEIAAVTHGALQGLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSAS 163
Query: 407 IVNKEHAQLHMVAYKSPEF------NQTDGVTRKTDVWSLGILILELLTGKFP 453
I+ + + + +PE Q DG K DVWSLGI +EL K P
Sbjct: 164 IMAPANXFVGTPYWMAPEVILAMDEGQYDG---KVDVWSLGITCIELAERKPP 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSG FG + L + +K ++ S + ++DF E + LSHP L+ L
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ LV +F+ +G L++ L +R L + V +G+AYL + +
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE----ACVI 145
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ ++D+ + V + V + SPE + K+
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS G+L+ E+ + GK P
Sbjct: 206 DVWSFGVLMWEVFSEGKIP 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 73 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 124
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H +L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTF 183
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIP 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 72 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 123
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTF 182
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIP 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 78 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 129
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 188
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG + + +K + + E F E + L H L+ L A
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVV-S 74
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+E +V++++ GSL + L + G+ L P + + VA G+AY+ + +
Sbjct: 75 EEPIYIVTEYMNKGSLLDFL--KDGEGR-ALKLPNLVDMAAQVAAGMAYIER----MNYI 127
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L+S+N+L+ N + D+ L ++ + + +PE T K+
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 436 DVWSLGILILELLT-GKFP 453
DVWS GIL+ EL+T G+ P
Sbjct: 188 DVWSFGILLTELVTKGRVP 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 187
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 277 GPAMVVK--RFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--EEKLLVSDFVP 332
G +VVK + R S DF+E RL SHPN+LP++ L++ ++P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD 392
GSL N+LH +D +K +A+G+A+L+ P +P L S +V++D
Sbjct: 93 YGSLYNVLH---EGTNFVVDQSQAVKFALDMARGMAFLHTLEP--LIPRHALNSRSVMID 147
Query: 393 NAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQT---DGVTRKTDVWSLGILILELLT 449
++ A V + +++ A+ +PE Q D R D+WS +L+ EL+T
Sbjct: 148 EDMTARIS-MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
Query: 450 GKFP 453
+ P
Sbjct: 207 REVP 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 82 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 133
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTF 192
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 134
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTF 193
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTF 187
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 22/203 (10%)
Query: 260 VLGSGSFGSSYKAVL-LTGP---AMVVKRFR-QMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
V+G+G FG L L G A+ +K + + + DF + +G HPN++ L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYKE 373
R + ++V +F+ NG+L L R+ GQ + I+L +++G+A G+ YL
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTV---IQLVGMLRGIAAGMRYL--- 161
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFN 426
+ H L + N+L+++ ++D+ L ++ + ++ V + +PE
Sbjct: 162 -ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 427 QTDGVTRKTDVWSLGILILELLT 449
Q T +DVWS GI++ E+++
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 79 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 130
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 189
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 9 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 124 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 225
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 226 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 261
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 208 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 265
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 322
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H +L + N L+ + + D+ L ++ + H
Sbjct: 323 QISSAMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 378
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 424
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 425 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 460
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 85 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 136
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 195
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIP 218
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 187
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 86 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 137
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 196
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 6 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 63
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 120
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 121 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 222
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 223 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 83 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 134
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTF 193
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 9 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 124 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 225
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 226 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 261
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 250 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 307
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 364
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H +L + N L+ + + D+ L ++ + H
Sbjct: 365 QISSAMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 420
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 466
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 467 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 502
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 17 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 74
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 131
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 132 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 188 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 233
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 234 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G FG + + VK +Q S + + F + L H L+ L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 87 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 138
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTF 197
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIP 220
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 211 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 268
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + + + L +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVSAVVLLYMAT 325
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H +L + N L+ + + D+ L ++ + H
Sbjct: 326 QISSAMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 381
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 427
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 428 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 463
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 9 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 124 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 225
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 226 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 8 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 65
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 122
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 123 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 178
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 224
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 225 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 260
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 6 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 63
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 120
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 121 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 222
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 223 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 258
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 4 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 118
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 119 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 220
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 221 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 256
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 4 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 118
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 119 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 220
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 221 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMV-----VKRFRQMSNV-GKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + V +K + + +F + + S+ HP+L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRR--APGQPGLDWPIRLKIIKGVAKGLAY 369
+ L+ +L V+ +P+G L +H + Q L+W ++ +AKG+ Y
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP------ 423
L + L H L + NVL+ + +TD+ L ++ + + + K P
Sbjct: 133 LEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 424 EFNQTDGVTRKTDVWSLGILILELLT 449
E T ++DVWS G+ I EL+T
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 9 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + + + L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVSAVVLLYMAT 123
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 124 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 225
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 226 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 261
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 4 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + + + L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 119 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 220
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 221 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 256
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 4 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + + + L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 119 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 220
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 221 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 256
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMV-----VKRFRQMSNV-GKEDF 296
N ++ L + +VLGSG+FG+ YK + + V +K + + +F
Sbjct: 28 NQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEF 87
Query: 297 HEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRR--APGQPGLDWP 354
+ + S+ HP+L+ L+ +L V+ +P+G L +H + Q L+W
Sbjct: 88 MDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWC 146
Query: 355 IRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ 414
++ +AKG+ YL + L H L + NVL+ + +TD+ L ++ + +
Sbjct: 147 VQ------IAKGMMYLEER----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 415 LHMVAYKSP------EFNQTDGVTRKTDVWSLGILILELLT 449
+ K P E T ++DVWS G+ I EL+T
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 5 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 62
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++ +F+ G NLL R + ++ + L +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 119
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 120 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 175
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 221
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 222 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 257
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 258 AEVLGSGSFGSSYKAVLL-------TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN 310
+VLGSG+FG+ YK + + A+ V R KE E G + P
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG-VGSPY 80
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG----LDWPIRLKIIKGVAKG 366
+ L+ +L V+ +P G L + HVR G+ G L+W ++ +AKG
Sbjct: 81 VSRLLGICLTSTVQL-VTQLMPYGCLLD--HVRENRGRLGSQDLLNWCMQ------IAKG 131
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EF 425
++YL V L H L + NVL+ + +TD+ L +++ + + H K P ++
Sbjct: 132 MSYLED----VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 426 NQTDGVTRK-----TDVWSLGILILELLT 449
+ + R+ +DVWS G+ + EL+T
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 38/232 (16%)
Query: 257 SAEVLGSGSFGSSYKAVLLTGPAMVVK-------RFRQMSNVGKEDFHEHMTRLGSLSHP 309
S V+G G FG Y + ++ R +M V E F + L+HP
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNHP 82
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ-PGLDWPIRLKIIKGVAKGLA 368
N+L LI E L +P +LL R+P + P + I + VA+G+
Sbjct: 83 NVLALIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGME 138
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKE--------HAQLHMVA 419
YL ++ H L + N +LD ++ + D+ L I+++E HA+L V
Sbjct: 139 YLAEQ----KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL-PVK 193
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP----------ANYLAQGK 461
+ + E QT T K+DVWS G+L+ ELLT P ++LAQG+
Sbjct: 194 WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR 245
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LGSG FG + VK ++ S E F E T + LSHP L+ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMM-KLSHPKLVKFYGVCSK 74
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ +V++++ NG L N L R+ G+ GL+ L++ V +G+A+L
Sbjct: 75 EYPIYIVTEYISNGCLLNYL---RSHGK-GLEPSQLLEMCYDVCEGMAFLESH----QFI 126
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+D ++D+ + V + + V + +PE + K+
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 436 DVWSLGILILELLT-GKFPAN 455
DVW+ GIL+ E+ + GK P +
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 9 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 66
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++ +F+ G NLL R + ++ + L +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 123
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 124 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 225
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 226 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 261
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
EV G FG +KA LL + VK F ++ +E + L + H N+L I
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYE-VYSLPGMKHENILQFIGAE 87
Query: 319 YRKE----EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
R + L++ F GSL++ L + W I + +A+GLAYL+++
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV------VSWNELCHIAETMARGLAYLHEDI 141
Query: 375 PGV------TLPHGHLKSSNVLLDNAYEPLLTDYALV------PIVNKEHAQLHMVAYKS 422
PG+ + H +KS NVLL N + D+ L H Q+ Y +
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 423 PEF------NQTDGVTRKTDVWSLGILILEL 447
PE Q D R D++++G+++ EL
Sbjct: 202 PEVLEGAINFQRDAFLR-IDMYAMGLVLWEL 231
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTG------PAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLL 312
+V+G+G FG YK +L T P + + + DF +G SH N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + + +++++++ NG+L L R G+ + + + ++G+A G+ YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGM--LRGIAAGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + +PE
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E++T
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ A+ +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + + + D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 4 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++ +F+ G NLL R + + + L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG---NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 119 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 220
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 221 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 256
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 4 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 61
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++ +F+ G NLL R + + + L +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYG---NLLDYLRECNRQEVSAVVLLYMAT 118
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 119 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 220
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 221 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 256
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG Y+ V V + + + E+F + + + HPNL+ L+ R
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ ++++F+ G NLL R + + + L + ++ + YL K+
Sbjct: 79 EPPFYIITEFMTYG---NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK----NFI 131
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ + + D+ L ++ + H + + +PE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 436 DVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTK 492
DVW+ G+L+ E+ T +P +Q E+ +KD R +
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQ--------------------VYELLEKDYRMER 231
Query: 493 SGEGEMLKLLKIGMCCCEWNAERR 516
EG K+ ++ C +WN R
Sbjct: 232 P-EGCPEKVYELMRACWQWNPSDR 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM----SNVGKEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L L G + + + + + DF + +G HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + +++++F+ NGSL + L R+ GQ + I+L +++G+A G+ YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTV---IQLVGMLRGIAAGMKYL-- 125
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---------VAYKSP 423
+ H L + N+L+++ ++D+ L + + + + + +P
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 424 EFNQTDGVTRKTDVWSLGILILELLT 449
E Q T +DVWS GI++ E+++
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM----SNVGKEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L L G + + + + + DF + +G HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + +++++F+ NGSL + L R+ GQ + I+L +++G+A G+ YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTV---IQLVGMLRGIAAGMKYL-- 151
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---------VAYKSP 423
+ H L + N+L+++ ++D+ L + + + + + +P
Sbjct: 152 --ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 424 EFNQTDGVTRKTDVWSLGILILELLT 449
E Q T +DVWS GI++ E+++
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 79 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 133
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H +L + N+L++N + D+ L ++ +KE+ ++ + + +PE
Sbjct: 134 K----RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 261 LGSGSFGSSYKAVLLTGPAMV-VKRFRQMSNVGK-------EDFHEHMTRLGSLSHPNLL 312
+G G FG +K L+ ++V +K + G+ ++F + + +L+HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + +V +FVP G L + L + P + W ++L+++ +A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGIEYMQN 140
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYE--PL---LTDYALVP-IVNKEHAQLHMVAYKSPEF- 425
+ P + H L+S N+ L + E P+ + D++L V+ L + +PE
Sbjct: 141 QNPPIV--HRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 426 -NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGK 461
+ + T K D +S +++ +LTG+ P + + GK
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 35/246 (14%)
Query: 217 QNEIQSSDCYFVNSQNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGS---SYKAV 273
Q ++Q++ F+ S+ +S EM++ + LGSG++G V
Sbjct: 17 QGDLQATPGMFITSKKGHLS---------EMYQ-------RVKKLGSGAYGEVLLCRDKV 60
Query: 274 LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333
A+ + R +S E + L L HPN++ L F+ K LV +
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120
Query: 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN 393
G L + + R + +D + IIK V G+ YL+K + H LK N+LL++
Sbjct: 121 GELFDEIIHRMKFNE--VDAAV---IIKQVLSGVTYLHKH----NIVHRDLKPENLLLES 171
Query: 394 AYEPLL---TDYALVPIV---NKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILEL 447
+ L D+ L + K +L Y +PE + K DVWS+G+++ L
Sbjct: 172 KEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFIL 230
Query: 448 LTGKFP 453
L G P
Sbjct: 231 LAGYPP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +F+P GSL L + +D L+ + KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIM-EFLPYGSLREYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 135
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 136 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 231
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKE--------DFHEHMTRLGSLSHPNLL 312
+G G FG +K L+ ++V + + + E +F + + +L+HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + +V +FVP G L + L + P + W ++L+++ +A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGIEYMQN 140
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYE--PL---LTDYALVP-IVNKEHAQLHMVAYKSPEF- 425
+ P + H L+S N+ L + E P+ + D+ L V+ L + +PE
Sbjct: 141 QNPPIV--HRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI 198
Query: 426 -NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGK 461
+ + T K D +S +++ +LTG+ P + + GK
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 256 ASAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
+ E+LG G FG +K TG + K + KE+ ++ + L H NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ K + +LV ++V G L + + + + LD + +K + +G+ ++++ +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI-IDESYNLTELD---TILFMKQICEGIRHMHQMY 207
Query: 375 PGVTLPHGHLKSSNVLLDN--AYEPLLTDYALVPIVN---KEHAQLHMVAYKSPEFNQTD 429
+ H LK N+L N A + + D+ L K + +PE D
Sbjct: 208 ----ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
V+ TD+WS+G++ LL+G P
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G G + + VK +Q S + + F + L H L+ L A
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+E ++++++ NGSL + L + P L L + +A+G+A++ +
Sbjct: 77 V-TQEPIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIEER---- 128
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGV 431
H L+++N+L+ + + D+ L ++ +E A+ + + +PE
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTF 187
Query: 432 TRKTDVWSLGILILELLT-GKFP 453
T K+DVWS GIL+ E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 133 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 134
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 135 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 261 LGSGSFGSSYKAVLLTGPAMV-VKRFRQMSNVGK-------EDFHEHMTRLGSLSHPNLL 312
+G G FG +K L+ ++V +K + G+ ++F + + +L+HPN++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + +V +FVP G L + L + P + W ++L+++ +A G+ Y+
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGIEYMQN 140
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYE--PLLTDYALVPIVNKEHAQLHMVA-------YKSP 423
+ P + H L+S N+ L + E P+ A V +H V+ + +P
Sbjct: 141 QNPPIV--HRDLRSPNIFLQSLDENAPVC---AKVADFGTSQQSVHSVSGLLGNFQWMAP 195
Query: 424 EF--NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGK 461
E + + T K D +S +++ +LTG+ P + + GK
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 82
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 83 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 135
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 136 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 32/247 (12%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKE 294
F + D FE L + LG G+FGS Y + TG + VK+ + +
Sbjct: 4 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 61
Query: 295 DFHEHMTRLGSLSHPNLLPLIAFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGL 351
DF + L SL H N++ Y R+ KL++ +++P GSL + L + +
Sbjct: 62 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RI 116
Query: 352 DWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--N 409
D L+ + KG+ YL + H L + N+L++N + D+ L ++ +
Sbjct: 117 DHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 172
Query: 410 KEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGAN 464
KE ++ + + +PE + +DVWS G+++ EL T Y+ + K
Sbjct: 173 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 226
Query: 465 ADLATWV 471
A+ +
Sbjct: 227 AEFMRMI 233
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKE 294
F + D FE L + LG G+FGS Y + TG + VK+ + +
Sbjct: 2 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 59
Query: 295 DFHEHMTRLGSLSHPNLLPLIAFYY---RKEEKLLVSDFVPNGSLANLL--HVRRAPGQP 349
DF + L SL H N++ Y R+ KL++ +++P GSL + L H R
Sbjct: 60 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQAHAER----- 113
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV- 408
+D L+ + KG+ YL + H L + N+L++N + D+ L ++
Sbjct: 114 -IDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLP 168
Query: 409 -NKEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462
+KE ++ + + +PE + +DVWS G+++ EL T Y+ + K
Sbjct: 169 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT------YIEKSKS 222
Query: 463 ANADLATWV 471
A+ +
Sbjct: 223 PPAEFMRMI 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 82
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 83 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 135
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 136 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 32/249 (12%)
Query: 238 LHFVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVG 292
+ F + D FE L + LG G+FGS Y + TG + VK+ + +
Sbjct: 3 MAFEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 60
Query: 293 KEDFHEHMTRLGSLSHPNLLPLIAFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQP 349
DF + L SL H N++ Y R+ KL++ +++P GSL + L +
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE---- 115
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV- 408
+D L+ + KG+ YL + H L + N+L++N + D+ L ++
Sbjct: 116 RIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLP 171
Query: 409 -NKEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462
+KE ++ + + +PE + +DVWS G+++ EL T Y+ + K
Sbjct: 172 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT------YIEKSKS 225
Query: 463 ANADLATWV 471
A+ +
Sbjct: 226 PPAEFMRMI 234
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 32/247 (12%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKE 294
F + D FE L + LG G+FGS Y + TG + VK+ + +
Sbjct: 30 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 87
Query: 295 DFHEHMTRLGSLSHPNLLPLIAFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGL 351
DF + L SL H N++ Y R+ KL++ +++P GSL + L + +
Sbjct: 88 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RI 142
Query: 352 DWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--N 409
D L+ + KG+ YL + H L + N+L++N + D+ L ++ +
Sbjct: 143 DHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198
Query: 410 KEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGAN 464
KE ++ + + +PE + +DVWS G+++ EL T Y+ + K
Sbjct: 199 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 252
Query: 465 ADLATWV 471
A+ +
Sbjct: 253 AEFMRMI 259
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 82
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 83 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 135
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 136 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 104
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 105 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 157
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 158 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 214 ESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 73
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 74 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 126
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 127 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 183 ESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYAL---VPIVNKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + + + D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 32/247 (12%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKE 294
F + D FE L + LG G+FGS Y + TG + VK+ + +
Sbjct: 6 FEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 63
Query: 295 DFHEHMTRLGSLSHPNLLPLIAFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGL 351
DF + L SL H N++ Y R+ KL++ +++P GSL + L + +
Sbjct: 64 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RI 118
Query: 352 DWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--N 409
D L+ + KG+ YL + H L + N+L++N + D+ L ++ +
Sbjct: 119 DHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 174
Query: 410 KEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGAN 464
KE ++ + + +PE + +DVWS G+++ EL T Y+ + K
Sbjct: 175 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 228
Query: 465 ADLATWV 471
A+ +
Sbjct: 229 AEFMRMI 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 14/201 (6%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRF-RQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
LGSG+FG + +G V+K + S V E + L SL HPN++ + +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+V + G L + +A G+ L +++K + LAY + +
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFHSQH---- 144
Query: 379 LPHGHLKSSNVLLDNA--YEPL-LTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVT 432
+ H LK N+L + + P+ + D+ L + + + Y +PE + D VT
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD-VT 203
Query: 433 RKTDVWSLGILILELLTGKFP 453
K D+WS G+++ LLTG P
Sbjct: 204 FKCDIWSAGVVMYFLLTGCLP 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 89
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 90 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 142
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 143 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 199 ESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 135
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 136 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 231
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 81
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 82 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 134
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 135 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 86
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 87 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 139
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 140 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 85
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 86 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 138
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 139 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 195 ESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 133 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 151
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 152 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 32/249 (12%)
Query: 238 LHFVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVG 292
+ F + D FE L + LG G+FGS Y + TG + VK+ + +
Sbjct: 1 MAFEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 58
Query: 293 KEDFHEHMTRLGSLSHPNLLPLIAFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQP 349
DF + L SL H N++ Y R+ KL++ +++P GSL + L +
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE---- 113
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV- 408
+D L+ + KG+ YL + H L + N+L++N + D+ L ++
Sbjct: 114 RIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLP 169
Query: 409 -NKEHAQLHM-----VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462
+KE ++ + + +PE + +DVWS G+++ EL T Y+ + K
Sbjct: 170 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT------YIEKSKS 223
Query: 463 ANADLATWV 471
A+ +
Sbjct: 224 PPAEFMRMI 232
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 132
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 133 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 228
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 132
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 133 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 238 LHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH 297
L+F + D+ E D+ LG G +G Y V V + + + E+F
Sbjct: 19 LYFQSMDKWEMERTDITMKHK--LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFL 76
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL 357
+ + + HPNL+ L+ + +V++++P G NLL R + + + L
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYG---NLLDYLRECNREEVTAVVLL 133
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM 417
+ ++ + YL K+ H L + N L+ + + D+ L ++ + H
Sbjct: 134 YMATQISSAMEYLEKK----NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
Query: 418 -----VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE + + K+DVW+ G+L+ E+ T
Sbjct: 190 GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
+GSGSFG+ YK A+ + + + + F + L H N+L L Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMT 102
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
K+ +V+ + SL LHV+ Q + I + A+G+ YL+ + +
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ----LIDIARQTAQGMDYLHAK----NII 154
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM------VAYKSPE---FNQTDGV 431
H +KS+N+ L + D+ L + ++ + V + +PE +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 432 TRKTDVWSLGILILELLTGKFPANYL 457
+ ++DV+S GI++ EL+TG+ P +++
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 77 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 131
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 132 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 227
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 76 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 130
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 131 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + + + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT-----EFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + + + D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 161
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 162 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 241 VNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEH 299
+ R E+NDL +GSG+ G +K TG + VK+ R+ N KE+
Sbjct: 15 IGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRI 70
Query: 300 MTRLGSL--SH--PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPI 355
+ L + SH P ++ + + + + + G+ A L R Q + I
Sbjct: 71 LMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRM---QGPIPERI 125
Query: 356 RLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ- 414
K+ + K L YL KE GV H +K SN+LLD + L D+ + + + A+
Sbjct: 126 LGKMTVAIVKALYYL-KEKHGVI--HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182
Query: 415 --LHMVAYKSPEFNQTDGVTR-----KTDVWSLGILILELLTGKFP 453
AY +PE T+ + DVWSLGI ++EL TG+FP
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 133 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 107/264 (40%), Gaps = 36/264 (13%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G +G Y+ V V + + + E+F + + + HPNL+ L+ R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ ++++F+ G NLL R + + + L + ++ + YL K+
Sbjct: 79 EPPFYIITEFMTYG---NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK----NFI 131
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ + + D+ L ++ + H + + +PE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 436 DVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTK 492
DVW+ G+L+ E+ T +P +Q E+ +KD R +
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQ--------------------VYELLEKDYRMER 231
Query: 493 SGEGEMLKLLKIGMCCCEWNAERR 516
EG K+ ++ C +WN R
Sbjct: 232 P-EGCPEKVYELMRACWQWNPSDR 254
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 128
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 239
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 128
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 129 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 239
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 5 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 62
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 119
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ +
Sbjct: 120 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF 175
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 221
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 222 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 257
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + + + D+WS+G++ LL+G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 151 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 246
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 81
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 82 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 134
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 135 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + N+ E F + + L H L+ L A
Sbjct: 193 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 301
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 362 KSDVWSFGILLTELTTKGRVP 382
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQLVDMAAQIASGMAYVER----MN 300
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 82
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 83 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 135
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 136 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 192 ESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMT 301
N D+ E D+ LG G +G Y+ V V + + + E+F +
Sbjct: 6 NYDKWEMERTDITMKHK--LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAA 63
Query: 302 RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
+ + HPNL+ L+ R+ ++++F+ G NLL R + ++ + L +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG---NLLDYLRECNRQEVNAVVLLYMAT 120
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM---- 417
++ + YL K+ H L + N L+ + + D+ L ++ +
Sbjct: 121 QISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF 176
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNS 473
+ + +PE + + K+DVW+ G+L+ E+ T +P L+Q
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------------- 222
Query: 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR 516
E+ +KD R + EG K+ ++ C +WN R
Sbjct: 223 ------VYELLEKDYRMERP-EGCPEKVYELMRACWQWNPSDR 258
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 80
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 81 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 133
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 134 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 132
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L++N + D+ L ++ ++ + + + +PE
Sbjct: 133 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 228
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++++ NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q GK + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQLVDMAAQIASGMAYVER----MN 300
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 261 LGSGSFGS----SYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L SL H N++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 316 AFYY---RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
Y R+ KL++ +++P GSL + L + +D L+ + KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIM-EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGT 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV--NKEHAQLHM-----VAYKSPEF 425
+ H L + N+L++N + D+ L ++ +KE ++ + + +PE
Sbjct: 151 K----RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWV 471
+ +DVWS G+++ EL T Y+ + K A+ +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAEFMRMI 246
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 80 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 133 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 83
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 84 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 136
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 137 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 106/264 (40%), Gaps = 36/264 (13%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G +G Y+ V V + + + E+F + + + HPNL+ L+ R
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ ++ +F+ G NLL R + + + L + ++ + YL K+
Sbjct: 79 EPPFYIIIEFMTYG---NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK----NFI 131
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRKT 435
H L + N L+ + + D+ L ++ + H + + +PE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 436 DVWSLGILILELLT---GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTK 492
DVW+ G+L+ E+ T +P +Q E+ +KD R +
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQ--------------------VYELLEKDYRMER 231
Query: 493 SGEGEMLKLLKIGMCCCEWNAERR 516
EG K+ ++ C +WN R
Sbjct: 232 P-EGCPEKVYELMRACWQWNPSDR 254
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q GK + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 259 EVLGSGSFGSSYKAVLLTG------PAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLL 312
+VLGSG+FG+ YK + + P +++ S ++ + + S+ +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ YL
Sbjct: 115 RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYL 167
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQTD 429
L H L + NVL+ +TD+ L ++ E + H K P ++ +
Sbjct: 168 EDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 223
Query: 430 GV-----TRKTDVWSLGILILELLT 449
+ T ++DVWS G+ + EL+T
Sbjct: 224 SILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 16 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLK-----GETGKYLRLPQLVDMAAQIASGMAYVER----MN 124
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 185 KSDVWSFGILLTELTTKGRVP 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
LG G+FG YKA TG K S ED+ + L + HP ++ L+ YY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 320 RKEEKLLVSDFVPNGSL-ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+ ++ +F P G++ A +L + R +P + + + + + L +L+ +
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSK----R 129
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYAL----VPIVNKEHAQLHMVAYKSPEFNQTDGVTR- 433
+ H LK+ NVL+ + L D+ + + + K + + + +PE + +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 434 ----KTDVWSLGILILELLTGKFPANYL 457
K D+WSLGI ++E+ + P + L
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
LG G+FG YKA TG K S ED+ + L + HP ++ L+ YY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 320 RKEEKLLVSDFVPNGSL-ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+ ++ +F P G++ A +L + R +P + + + + + L +L+ +
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSK----R 137
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYAL----VPIVNKEHAQLHMVAYKSPEFNQTDGVTR- 433
+ H LK+ NVL+ + L D+ + + + K + + + +PE + +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 434 ----KTDVWSLGILILELLTGKFPANYL 457
K D+WSLGI ++E+ + P + L
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 80
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 81 CRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 133
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 134 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 190 ESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q GK + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----GKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 28/190 (14%)
Query: 300 MTRLGSLSHPNLLPLIAFYYR----KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPI 355
M RL +HPN+L L+A+ R K E L+ F G+L N + + G + I
Sbjct: 79 MHRL--FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI 136
Query: 356 RLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY-----ALVPIVNK 410
L ++ G+ +GL ++ + H LK +N+LL + +P+L D A + +
Sbjct: 137 -LWLLLGICRGLEAIHAK----GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 411 EHA--------QLHMVAYKSPEFNQTDG---VTRKTDVWSLGILILELLTGKFPANYLAQ 459
A Q ++Y++PE + +TDVWSLG ++ ++ G+ P + + Q
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
Query: 460 GKGANADLAT 469
KG + LA
Sbjct: 252 -KGDSVALAV 260
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Query: 277 GPAMVVK--RFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--EEKLLVSDFVP 332
G +VVK + R S DF+E RL SHPN+LP++ L++ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD 392
GSL N+LH +D +K A+G A+L+ P +P L S +V +D
Sbjct: 93 YGSLYNVLH---EGTNFVVDQSQAVKFALDXARGXAFLHTLEP--LIPRHALNSRSVXID 147
Query: 393 NAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQT---DGVTRKTDVWSLGILILELLT 449
++ A V + + + A+ +PE Q D R D WS +L+ EL+T
Sbjct: 148 EDXTARIS-XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
Query: 450 GKFP 453
+ P
Sbjct: 207 REVP 210
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 25/237 (10%)
Query: 257 SAEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHP 309
+ E LGSG F K+ L A +K+ R S+ V +ED ++ L + HP
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
N++ L Y K + +L+ + V G L + L + + L + +K + G+ Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLL--DNAYEPL--LTDYALVPIV---NKEHAQLHMVAYKS 422
L+ + + H LK N++L N +P + D+ L + N+ + +
Sbjct: 130 LH----SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 185
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
PE + + + D+WS+G++ LL+G P +L K + VN +E+
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP--FLGDTKQETLANVSAVNYEFEDEY 240
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 260 VLGSGSFGSSYKAVL----LTGPAMVVKRF--RQMSN-VGKEDFHEHMTRLGSLSHPNLL 312
VLG GSFG + +L +TG VK RQ+ KE + L L HPN++
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F+ K LV + G L + + R+ + +II+ V G+ Y++K
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-----ARIIRQVLSGITYMHK 144
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYAL---VPIVNKEHAQLHMVAYKSPEFN 426
+ H LK N+LL++ + + D+ L K ++ Y +PE
Sbjct: 145 N----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPAN 455
K DVWS G+++ LL+G P N
Sbjct: 201 HG-TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 192 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLK-----GETGKYLRLPQLVDMAAQIASGMAYVER----MN 300
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 361 KSDVWSFGILLTELTTKGRVP 381
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++ + NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 134
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 135 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G G+ G+ Y A+ + TG + +++ KE + + +PN++ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y +E +V +++ GSL +++ + +D + + + L +L+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---- 136
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTR 433
+ H ++KS N+LL LTD+ + E ++ + + +PE
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 196
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+WSLGI+ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMVVKR---FRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+G+GS+G K + ++V + + M+ K+ + L L HPN+ +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI---VR 69
Query: 317 FYYRKEEK-----LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y R ++ +V ++ G LA+++ + + LD L+++ + L +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 372 KEFPG-VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----HAQLHMVAYKSPEFN 426
+ G T+ H LK +NV LD L D+ L I+N + A + Y SPE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463
K+D+WSLG L+ EL P +Q + A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 234 EISKLHFVNN-----DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGP----AMVVKR 284
EIS H V D FEL +VLG GSFG + +T P +K
Sbjct: 11 EISITHHVKAGSEKADPSHFEL-------LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKV 63
Query: 285 FRQMSNVGKEDFHEHMTR--LGSLSHPNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLH 341
++ + ++ M R L ++HP ++ L + ++ E KL L+ DF+ G L L
Sbjct: 64 LKKATLKVRDRVRTKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS 122
Query: 342 VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTD 401
+ + + + +A GL +L+ + + + LK N+LLD LTD
Sbjct: 123 KEVMFTEEDVKF-----YLAELALGLDHLH----SLGIIYRDLKPENILLDEEGHIKLTD 173
Query: 402 YAL----VPIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ L + K ++ V Y +PE G + D WS G+L+ E+LTG P
Sbjct: 174 FGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 76
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +A+G+ Y
Sbjct: 77 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGMNY 129
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 130 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 186 ESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 275 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQLVDMAAQIASGMAYVER----MN 383
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 444 KSDVWSFGILLTELTTKGRVP 464
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 260 VLGSGSFGSSYKAVL----LTGPAMVVKRF--RQMSN-VGKEDFHEHMTRLGSLSHPNLL 312
VLG GSFG + +L +TG VK RQ+ KE + L L HPN++
Sbjct: 57 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F+ K LV + G L + + R+ + +II+ V G+ Y++K
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-----ARIIRQVLSGITYMHK 168
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYAL---VPIVNKEHAQLHMVAYKSPEFN 426
+ H LK N+LL++ + + D+ L K ++ Y +PE
Sbjct: 169 N----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPAN 455
K DVWS G+++ LL+G P N
Sbjct: 225 HGT-YDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 260 VLGSGSFGSSYKAVL----LTGPAMVVKRF--RQMSN-VGKEDFHEHMTRLGSLSHPNLL 312
VLG GSFG + +L +TG VK RQ+ KE + L L HPN++
Sbjct: 56 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F+ K LV + G L + + R+ + +II+ V G+ Y++K
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-----ARIIRQVLSGITYMHK 167
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYAL---VPIVNKEHAQLHMVAYKSPEFN 426
+ H LK N+LL++ + + D+ L K ++ Y +PE
Sbjct: 168 N----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPAN 455
K DVWS G+++ LL+G P N
Sbjct: 224 HGT-YDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G G+ G+ Y A+ + TG + +++ KE + + +PN++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y +E +V +++ GSL +++ + +D + + + L +L+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---- 135
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVA---YKSPEFNQTDGVTR 433
+ H +KS N+LL LTD+ + E ++ MV + +PE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+WSLGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G G+ G+ Y A+ + TG + +++ KE + + +PN++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y +E +V +++ GSL +++ + +D + + + L +L+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---- 135
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTR 433
+ H +KS N+LL LTD+ + E ++ + + +PE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+WSLGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 19 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLK-----GETGKYLRLPQLVDMAAQIASGMAYVER----MN 127
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 188 KSDVWSFGILLTELTTKGRVP 208
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G G+ G+ Y A+ + TG + +++ KE + + +PN++ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y +E +V +++ GSL +++ + +D + + + L +L+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---- 135
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTR 433
+ H +KS N+LL LTD+ + E ++ + + +PE
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGP 195
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+WSLGI+ +E++ G+ P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 260 VLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
LG+GSFG Y A+ + +VV R +Q+ + E L ++HP
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERL-----MLSIVTHP 66
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
++ + + ++ ++ D++ G L +LL R++ P P+ V L Y
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPN---PVAKFYAAEVCLALEY 121
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV-NKEHAQLHMVAYKSPEFNQT 428
L+ + + + LK N+LLD +TD+ V + + Y +PE T
Sbjct: 122 LHSK----DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVST 177
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
+ D WS GILI E+L G P
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMVVKR---FRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+G+GS+G K + ++V + + M+ K+ + L L HPN+ +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI---VR 69
Query: 317 FYYRKEEK-----LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y R ++ +V ++ G LA+++ + + LD L+++ + L +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 372 KEFPG-VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ G T+ H LK +NV LD L D+ L I+N + + Y SPE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463
K+D+WSLG L+ EL P +Q + A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G G+ G+ Y A+ + TG + +++ KE + + +PN++ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y +E +V +++ GSL +++ + +D + + + L +L+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSN---- 136
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTR 433
+ H +KS N+LL LTD+ + E ++ + + +PE
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+WSLGI+ +E++ G+ P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 81
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 82 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 134
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ ++ E + H K P ++
Sbjct: 135 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++ + NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEHMTRLGSLSHPNLLP 313
+V+G+G FG L + + VG + DF + +G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + ++V++ + NGSL + L R+ Q + I+L +++G+A G+ YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTV---IQLVGMLRGIASGMKYL-- 163
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
+ H L + N+L+++ ++D+ L ++ + + + + SPE
Sbjct: 164 --SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 17 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 125
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 186 KSDVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF ++ A L + + ++ KE+ ++TR + L HP +
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 147
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 33/245 (13%)
Query: 228 VNSQNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQ 287
+N +D + + +D + E ++ + +V+G+GSFG ++A L+ + +K+ Q
Sbjct: 15 LNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ 74
Query: 288 MSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY----RKEEKL--LVSDFVPNGSLANLLH 341
K + + + + HPN++ L AF+Y +K+E LV ++VP H
Sbjct: 75 ----DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH 130
Query: 342 VRRAPGQPGLDWPIRLKIIK----GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP 397
+ L + + +IK + + LAY++ + + H +K N+LLD
Sbjct: 131 YAK------LKQTMPMLLIKLYMYQLLRSLAYIH----SIGICHRDIKPQNLLLDPPSGV 180
Query: 398 L-LTDYALVPIVNKEHAQLHMVA---YKSPE--FNQTDGVTRKTDVWSLGILILELLTGK 451
L L D+ I+ + + Y++PE F T+ T D+WS G ++ EL+ G+
Sbjct: 181 LKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATN-YTTNIDIWSTGCVMAELMQGQ 239
Query: 452 --FPA 454
FP
Sbjct: 240 PLFPG 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 86
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 87 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 139
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ ++ E + H K P ++
Sbjct: 140 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VL SG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 86
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 87 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 139
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 140 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 173
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 174 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 229
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 230 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 167
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 168 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 223
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 224 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ ++ E + H K P ++
Sbjct: 133 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 261 LGSGSFGSSYKAVLLT----GPAMVVKRFR--QMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
+G GSFG KA+L+ G V+K +MS+ +E+ + L ++ HPN++
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG--------LDWPIRLKIIKGVAKG 366
+ +V D+ G L +R Q G LDW +++ +
Sbjct: 89 RESFEENGSLYIVMDYCEGGDL-----FKRINAQKGVLFQEDQILDWFVQICL------A 137
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK----EHAQLHMVAYKS 422
L +++ + H +KS N+ L L D+ + ++N A + Y S
Sbjct: 138 LKHVHDR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGK 451
PE + K+D+W+LG ++ EL T K
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 15 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 123
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 184 KSDVWSFGILLTELTTKGRVP 204
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VL SG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 79
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L ++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 80 CRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 132
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 133 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 189 ESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 173
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 174 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 230 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMV-VKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
VLG G++G Y L+ + +K + + + HE + L H N++ + +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+ + VP GSL+ LL + P + + I K + +GL YL+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGF-YTKQILEGLKYLHDN----Q 142
Query: 379 LPHGHLKSSNVLLDNAYEPLL------TDYALVPIVNKEHAQLHMVAYKSPEF--NQTDG 430
+ H +K NVL+ N Y +L T L I + Y +PE G
Sbjct: 143 IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201
Query: 431 VTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463
+ D+WSLG I+E+ TGK P L + + A
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 177
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 178 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 233
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 234 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 260 VLGSGSFGSSYKAVL----LTGPAMVVKRF--RQMSN-VGKEDFHEHMTRLGSLSHPNLL 312
VLG GSFG + +L +TG VK RQ+ KE + L L HPN++
Sbjct: 39 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F+ K LV + G L + + R+ + +II+ V G+ Y++K
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-----ARIIRQVLSGITYMHK 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYAL---VPIVNKEHAQLHMVAYKSPEFN 426
+ H LK N+LL++ + + D+ L K ++ Y +PE
Sbjct: 151 N----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPAN 455
K DVWS G+++ LL+G P N
Sbjct: 207 HGT-YDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLK-----GETGKYLRLPQLVDMSAQIASGMAYVER----MN 131
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 175
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 176 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 231
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 232 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 23 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLK-----GETGKYLRLPQLVDMSAQIASGMAYVER----MN 131
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 192 KSDVWSFGILLTELTTKGRVP 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ-----MSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LGSG++G LTG +K ++ SN G + + L L HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA--LLDEVAVLKQLDHPNIMKL 69
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
F+ K LV + G L + + +R+ + +D + I+K V G YL+K
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE--VDAAV---IMKQVLSGTTYLHKH- 123
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLL---TDYAL---VPIVNKEHAQLHMVAYKSPEFNQT 428
+ H LK N+LL++ L D+ L + K +L Y +PE +
Sbjct: 124 ---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
K DVWS G+++ LL G P
Sbjct: 181 K-YDEKCDVWSCGVILYILLCGYPP 204
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 218
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 219 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 274
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 275 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMVVKR---FRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+G+GS+G K + ++V + + M+ K+ + L L HPN+ +
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI---VR 69
Query: 317 FYYRKEEK-----LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y R ++ +V ++ G LA+++ + + LD L+++ + L +
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECH 128
Query: 372 KEFPG-VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-EHAQLHMVA---YKSPEFN 426
+ G T+ H LK +NV LD L D+ L I+N E V Y SPE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463
K+D+WSLG L+ EL P +Q + A
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA 225
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 150
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 151 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 207 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL--- 314
E++GSG FG +KA + G V+KR + E + L L H N++
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVK----YNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 315 -IAFYY----------RKEEKLLV--SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK 361
F Y R + K L +F G+L + RR LD + L++ +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFE 129
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLH---MV 418
+ KG+ Y++ + L + LK SN+ L + + + D+ LV + + + +
Sbjct: 130 QITKGVDYIHSK----KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 419 AYKSPEFNQTDGVTRKTDVWSLGILILELL 448
Y SPE + ++ D+++LG+++ ELL
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 151
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 152 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 207
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 208 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNGCL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
++ +D+W+LG +I +L+ G P
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 150
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 151 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 206
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 207 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L F
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 318 YYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+Y EK LV D+VP H RA + + ++L + + + + LAY++
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYIH 144
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE--F 425
+ H +K N+LLD L L D+ + + + + Y++PE F
Sbjct: 145 ----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 200
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
TD T DVWS G ++ ELL G+ FP +
Sbjct: 201 GATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPL 314
++LG GSF + A L + + ++ KE+ ++TR + L HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 315 IAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 96 Y-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 147
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA------YKSPEFNQ 427
G + H LK N+LL+ +TD+ +++ E Q A Y SPE
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 293 KEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLD 352
+ DF + +G HPN++ L R ++V++++ NGSL L R GQ +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIM 151
Query: 353 WPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH 412
+ +++GV G+ YL + H L + NVL+D+ ++D+ L ++ +
Sbjct: 152 QLV--GMLRGVGAGMRYLSD----LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 413 AQLHM-------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + + +PE + +DVWS G+++ E+L
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 146
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 147 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 202
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 203 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 157
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 158 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 213
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 214 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 81
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 82 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 134
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ ++ E + H K P ++
Sbjct: 135 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 142
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 143 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 198
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 199 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 102 LY-FCFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 154
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 155 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VL SG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 86
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 87 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 139
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ L ++ E + H K P ++
Sbjct: 140 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 196 ESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + + H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 81
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 82 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 134
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ ++ E + H K P ++
Sbjct: 135 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 191 ESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + + G P L +IK +YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIP-------LPLIK------SYLFQL 114
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNL 311
+VLGSG+FG+ YK + + + +K R+ ++ KE E + S+ +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV-MASVDNPHV 83
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
L+ +L++ +P G L + + H Q L+W ++ +AKG+ Y
Sbjct: 84 CRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNY 136
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-EFNQT 428
L L H L + NVL+ +TD+ ++ E + H K P ++
Sbjct: 137 LEDR----RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 429 DGV-----TRKTDVWSLGILILELLT 449
+ + T ++DVWS G+ + EL+T
Sbjct: 193 ESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 11 TLSRLPGLRSLSFINNSFDGPMP-SVGKLT--LRALYLSLNKFTGEIP------------ 55
++S LP L ++F N G +P S G + ++ +S N+ TG+IP
Sbjct: 144 SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203
Query: 56 ----------SDAFAGMDQLKKVHLARNHFSGQIPKSXXXXXXXXXXXXXXXSFQGKIPD 105
S F +K+HLA+N + + K + G +P
Sbjct: 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIY-GTLPQ 262
Query: 106 --FPLAHLTLLDLSYNQLVGRIPD--TLSNFDATSFQGNKGLCGKPLEAC 151
L L L++S+N L G IP L FD +++ NK LCG PL AC
Sbjct: 263 GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G++ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 139
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 140 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELI 195
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 196 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMV-VKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
VLG G++G Y L+ + +K + + + HE + L H N++ + +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+ + VP GSL+ LL + P + + I K + +GL YL+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGF-YTKQILEGLKYLHDN----Q 128
Query: 379 LPHGHLKSSNVLLDNAYEPLL------TDYALVPIVNKEHAQLHMVAYKSPEF--NQTDG 430
+ H +K NVL+ N Y +L T L I + Y +PE G
Sbjct: 129 IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 187
Query: 431 VTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463
+ D+WSLG I+E+ TGK P L + + A
Sbjct: 188 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAA 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L ++N+L+ + D+ L ++ + + +PE T
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 26/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+V+G+GSFG Y+A L +G + +K+ Q K + + + L H N++ L
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 317 FYYRKEEKL------LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
F+Y EK LV D+VP H RA + + ++L + + + + LAY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-VKLYMYQ-LFRSLAYI 138
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPE-- 424
+ + H +K N+LLD L L D+ + + + + Y++PE
Sbjct: 139 H----SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI 194
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
F TD T DVWS G ++ ELL G+ FP +
Sbjct: 195 FGATD-YTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 7 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 66
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH + + + I + A+G+
Sbjct: 67 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGM 121
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 122 DYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE ++ + ++DV++ GI++ EL+TG+ P
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + + G P L +IK +YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIP-------LPLIK------SYLFQL 115
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 24/215 (11%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLP 380
+ ++++++ NG L N L R Q L++ K V + + YL +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESK----QFL 127
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIV-----NKEHAQLHMVAYKSPEFNQTDGVTRKT 435
H L + N L+++ ++D+ L V V + PE + K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 436 DVWSLGILILELLT-GKFP---------ANYLAQG 460
D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPL 314
++LG GSF + A L + + ++ KE+ ++TR + L HP + L
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 315 IAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 96 Y-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 147
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFNQ 427
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPL 314
++LG GSF + A L + + ++ KE+ ++TR + L HP + L
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 315 IAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 98 Y-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 149
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFNQ 427
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM----SNVGKEDFHEHMTRLGSLSHPNLLP 313
+V+G G FG L + G + + + ++ + DF + +G HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + +++++++ NGSL L R+ G+ + I+L +++G+ G+ YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTV---IQLVGMLRGIGSGMKYL-- 132
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
++ H L + N+L+++ ++D+ + ++ + + + + +PE
Sbjct: 133 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 260 VLGSGSFGSSYKAVL----LTGPAMVVKRF--RQMSN-VGKEDFHEHMTRLGSLSHPNLL 312
VLG GSFG + +L +TG VK RQ+ KE + L L HPN+
Sbjct: 33 VLGKGSFG---EVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F+ K LV + G L + + R+ + +II+ V G+ Y +K
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA-----ARIIRQVLSGITYXHK 144
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYAL---VPIVNKEHAQLHMVAYKSPEFN 426
+ H LK N+LL++ + + D+ L K ++ Y +PE
Sbjct: 145 N----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL 200
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPAN 455
K DVWS G+++ LL+G P N
Sbjct: 201 HG-TYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 98 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 98 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 150
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 260 VLGSGSFGSSYKAVL-LTG----PAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
V+G+G FG L L G P + + + DF + +G HPN++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYKE 373
+ + ++V++++ NGSL L ++ GQ + I+L +++G++ G+ YL
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTV---IQLVGMLRGISAGMKYL--- 140
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFN 426
+ H L + N+L+++ ++D+ L ++ + + + + +PE
Sbjct: 141 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 427 QTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVS 222
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 113
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 113
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 172
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 113
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 18/211 (8%)
Query: 254 LRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNL 311
L E +G GSFG +K + +V + + E + +T L P +
Sbjct: 28 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG-LDWPIRLKIIKGVAKGLAYL 370
Y + + ++ +++ GS +LL +PG LD I++ + KGL YL
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYL 140
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ E H +K++NVLL E L D+ + + + + + +PE
Sbjct: 141 HSE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 196
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYL 457
+ K D+WSLGI +EL G+ P + L
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 147
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNLLPLIA 316
E +G GSFG +K + +V + + E + +T L P +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG-LDWPIRLKIIKGVAKGLAYLYKEFP 375
Y + + ++ +++ GS +LL +PG LD I++ + KGL YL+ E
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLHSE-- 138
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGV 431
H +K++NVLL E L D+ + + + + + +PE +
Sbjct: 139 --KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 432 TRKTDVWSLGILILELLTGKFPANYL 457
K D+WSLGI +EL G+ P + L
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPL 314
++LG GSF + A L + + ++ KE+ ++TR + L HP + L
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 315 IAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 95 Y-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 146
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFNQ 427
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 113
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 19/201 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V++++ G L + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTR 433
H L+++N+L+ + D+ L ++ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 195 KSDVWSFGILLTELTTKGRVP 215
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 111
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 170
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNLLPLIA 316
E +G GSFG +K + +V + + E + +T L P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG-LDWPIRLKIIKGVAKGLAYLYKEFP 375
Y + + ++ +++ GS +LL +PG LD I++ + KGL YL+ E
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLHSE-- 123
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGV 431
H +K++NVLL E L D+ + + + + + +PE +
Sbjct: 124 --KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 432 TRKTDVWSLGILILELLTGKFPANYL 457
K D+WSLGI +EL G+ P + L
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 70
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 116
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 175
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 94 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 146
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIP-------LPLIK------SYLFQL 115
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 111
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 170
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM----SNVGKEDFHEHMTRLGSLSHPNLLP 313
+V+G G FG L + G + + + ++ + DF + +G HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + +++++++ NGSL L R+ G+ + I+L +++G+ G+ YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTV---IQLVGMLRGIGSGMKYL-- 126
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
++ H L + N+L+++ ++D+ + ++ + + + + +PE
Sbjct: 127 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 23 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL-YKEFPGVTL 379
+ ++++++ NG L N L R Q L++ K V + + YL K+F
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESKQF----- 132
Query: 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRK 434
H L + N L+++ ++D+ L V + + V + PE + K
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 192
Query: 435 TDVWSLGILILELLT-GKFP---------ANYLAQG 460
+D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 228
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 259 EVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM----SNVGKEDFHEHMTRLGSLSHPNLLP 313
+V+G G FG L + G + + + ++ + DF + +G HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLYK 372
L + + +++++++ NGSL L R+ G+ + I+L +++G+ G+ YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTV---IQLVGMLRGIGSGMKYLSD 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEF 425
++ H L + N+L+++ ++D+ + ++ + + + + +PE
Sbjct: 150 ----MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
T +DVWS GI++ E+++
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 111
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 170
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 16 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL-YKEFPGVTL 379
+ ++++++ NG L N L R Q L++ K V + + YL K+F
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQ----LLEMCKDVCEAMEYLESKQF----- 125
Query: 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRK 434
H L + N L+++ ++D+ L V + + V + PE + K
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 435 TDVWSLGILILELLT-GKFP---------ANYLAQG 460
+D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 149
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 234 EISKLHFVNNDRE-----MFELNDLLRASAEVLGSGSFGSSYKAVLLTGP----AMVVKR 284
EI+ H V E FEL +VLG GSFG + ++G +K
Sbjct: 8 EIAITHHVKEGHEKADPSQFEL-------LKVLGQGSFGKVFLVKKISGSDARQLYAMKV 60
Query: 285 FRQMSNVGKEDFHEHMTR--LGSLSHPNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLH 341
++ + ++ M R L ++HP ++ L + ++ E KL L+ DF+ G L L
Sbjct: 61 LKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS 119
Query: 342 VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTD 401
+ + + + +A L +L+ + + + LK N+LLD LTD
Sbjct: 120 KEVMFTEEDVKF-----YLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTD 170
Query: 402 YAL----VPIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ L + K ++ V Y +PE G T+ D WS G+L+ E+LTG P
Sbjct: 171 FGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPL 314
++LG GSF + A L + + ++ KE+ ++TR + L HP + L
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 315 IAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 80 Y-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH-- 131
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFNQ 427
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 132 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 114
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 74 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 126
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 127 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +++ GSL + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGVT 432
H L+++N+L+ + D+ L ++ ++ A+ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFT 193
Query: 433 RKTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 111
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 170
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 100 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 152
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 153 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 70
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 71 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 116
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 175
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNLLPLIA 316
E +G GSFG +K + +V + + E + +T L P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG-LDWPIRLKIIKGVAKGLAYLYKEFP 375
Y + + ++ +++ GS +LL +PG LD I++ + KGL YL+ E
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATILREILKGLDYLHSE-- 123
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGV 431
H +K++NVLL E L D+ + + + + + +PE +
Sbjct: 124 --KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 432 TRKTDVWSLGILILELLTGKFPANYL 457
K D+WSLGI +EL G+ P + L
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 73 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 125
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 126 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 114
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 72 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 124
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 125 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL-YKEFPGVTL 379
+ ++++++ NG L N L R Q L++ K V + + YL K+F
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESKQF----- 141
Query: 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRK 434
H L + N L+++ ++D+ L V + + V + PE + K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 435 TDVWSLGILILELLT-GKFP---------ANYLAQG 460
+D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 115
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 69 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 114
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 173
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 115
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 33/236 (13%)
Query: 234 EISKLHFVNNDRE-----MFELNDLLRASAEVLGSGSFGSSYKAVLLTGP----AMVVKR 284
EI+ H V E FEL +VLG GSFG + ++G +K
Sbjct: 7 EIAITHHVKEGHEKADPSQFEL-------LKVLGQGSFGKVFLVKKISGSDARQLYAMKV 59
Query: 285 FRQMSNVGKEDFHEHMTR--LGSLSHPNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLH 341
++ + ++ M R L ++HP ++ L + ++ E KL L+ DF+ G L L
Sbjct: 60 LKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLS 118
Query: 342 VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTD 401
+ + + + +A L +L+ + + + LK N+LLD LTD
Sbjct: 119 KEVMFTEEDVKF-----YLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTD 169
Query: 402 YAL----VPIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ L + K ++ V Y +PE G T+ D WS G+L+ E+LTG P
Sbjct: 170 FGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 12 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL-YKEFPGVTL 379
+ ++++++ NG L N L R Q L++ K V + + YL K+F
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQ----LLEMCKDVCEAMEYLESKQF----- 121
Query: 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRK 434
H L + N L+++ ++D+ L V + + V + PE + K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 435 TDVWSLGILILELLT-GKFP---------ANYLAQG 460
+D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 217
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 73
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 119
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 178
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL-YKEFPGVTL 379
+ ++++++ NG L N L R Q L++ K V + + YL K+F
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESKQF----- 126
Query: 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRK 434
H L + N L+++ ++D+ L V + + V + PE + K
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 435 TDVWSLGILILELLT-GKFP---------ANYLAQG 460
+D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 68 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIP-------LPLIK------SYLFQL 113
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 172
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGP----AMVVKRFRQMSNVGKEDFHEHMTR--LGSLSHPNLL 312
+VLG GSFG + ++G +K ++ + ++ M R L ++HP ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 313 PLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
L + ++ E KL L+ DF+ G L L + + + + +A L +L+
Sbjct: 90 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALALDHLH 143
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL----VPIVNKEHAQLHMVAYKSPEFNQ 427
+ + + LK N+LLD LTD+ L + K ++ V Y +PE
Sbjct: 144 ----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
G T+ D WS G+L+ E+LTG P
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 293 KEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLD 352
+ DF + +G HPN++ L R ++V++++ NGSL L R GQ +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIM 151
Query: 353 WPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH 412
+ +++GV G+ YL + H L + NVL+D+ ++D+ L ++ +
Sbjct: 152 QLV--GMLRGVGAGMRYLSD----LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205
Query: 413 AQLHM-------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE + +DVWS G+++ E+L
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 16/202 (7%)
Query: 260 VLGSGSFGSSYKA-VLLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLG-SLSHPNLLPLI 315
+LG GSF Y+A + TG + +K + M G ++ ++ L HP++L L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
++ LV + NG + L R P +II G+ LY
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM------LYLHSH 131
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGV 431
G+ H L SN+LL + D+ L + H + + + Y SPE
Sbjct: 132 GIL--HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
Query: 432 TRKTDVWSLGILILELLTGKFP 453
++DVWSLG + LL G+ P
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPP 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 70 LLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIP-------LPLIK------SYLFQL 115
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFR-QMSNVGKEDFHEHMTR 302
+R+ +EL +++ + A + ++ + K + +KR + ++ + +
Sbjct: 13 NRDDYELQEVIGSGATAVVQAAYCAPKKE------KVAIKRINLEKCQTSMDELLKEIQA 66
Query: 303 LGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG---LDWPIRLKI 359
+ HPN++ + K+E LV + GS+ +++ A G+ LD I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI------VNKEHA 413
++ V +GL YL+K H +K+ N+LL + D+ + + +
Sbjct: 127 LREVLEGLEYLHKN----GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 414 QLHMV---AYKSPE-FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ V + +PE Q G K D+WS GI +EL TG P
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
++LG GSF + A L + + ++ KE+ ++TR + L HP +
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 314 LIAFYYRKEEKLLVS-DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F ++ +EKL + NG L L ++R+ D + L YL+
Sbjct: 75 LY-FTFQDDEKLYFGLSYAKNGEL--LKYIRKIGS---FDETCTRFYTAEIVSALEYLH- 127
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ------LHMVAYKSPEFN 426
G + H LK N+LL+ +TD+ +++ E Q + Y SPE
Sbjct: 128 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ +D+W+LG +I +L+ G P
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 26/216 (12%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG+G FG K G V + + ++ +++F E + +LSH L+ L +
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL-YKEFPGVTL 379
+ ++++++ NG L N L R Q L++ K V + + YL K+F
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEYLESKQF----- 141
Query: 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-----VAYKSPEFNQTDGVTRK 434
H L + N L+++ ++D+ L V + + V + PE + K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 435 TDVWSLGILILELLT-GKFP---------ANYLAQG 460
+D+W+ G+L+ E+ + GK P A ++AQG
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 73
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 74 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 119
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 178
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL--- 314
E++GSG FG +KA + G V++R + E + L L H N++
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVK----YNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 315 -IAFYYRKE---EKLLVSDFVP----------------------NGSLANLLHVRRAPGQ 348
F Y E + L SD+ P G+L + RR
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--- 130
Query: 349 PGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408
LD + L++ + + KG+ Y++ + L H LK SN+ L + + + D+ LV +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK----KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 409 NKEHAQLH---MVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + + Y SPE + ++ D+++LG+++ ELL
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 29/257 (11%)
Query: 247 MFELNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS 305
+++ D+L E LGSG+FG ++ V TG V K + K ++ +
Sbjct: 49 VYDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ 104
Query: 306 LSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAK 365
L HP L+ L + K E +L+ +F+ G L + R A + + ++ +
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFD----RIAAEDYKMSEAEVINYMRQACE 160
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDN--AYEPLLTDYALVPIVNKEHAQLHMVA---Y 420
GL ++++ ++ H +K N++ + A + D+ L +N + A +
Sbjct: 161 GLKHMHEH----SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480
+PE + V TD+W++G+L LL+G P DL T N V R +W
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF-------AGEDDLETLQN-VKRCDWE 268
Query: 481 GEVFDKDMRGTKSGEGE 497
FD+D + S E +
Sbjct: 269 ---FDEDAFSSVSPEAK 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 261 LGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKED---FHEHMTRLGSLSHPNLL 312
LGSG++G VLL TG +K ++ S + + + L L HPN++
Sbjct: 29 LGSGAYGE----VLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIM 84
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L F+ K LV + G L + + +R+ + +D + I+K V G YL+K
Sbjct: 85 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE--VDAAV---IMKQVLSGTTYLHK 139
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLL---TDYAL---VPIVNKEHAQLHMVAYKSPEFN 426
+ H LK N+LL++ L D+ L + K +L Y +PE
Sbjct: 140 H----NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ K DVWS G+++ LL G P
Sbjct: 196 RKK-YDEKCDVWSCGVILYILLCGYPP 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFR-QMSNVGKEDFHEHMTR 302
+R+ +EL +++ + A + ++ + K + +KR + ++ + +
Sbjct: 8 NRDDYELQEVIGSGATAVVQAAYCAPKKE------KVAIKRINLEKCQTSMDELLKEIQA 61
Query: 303 LGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG---LDWPIRLKI 359
+ HPN++ + K+E LV + GS+ +++ A G+ LD I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI------VNKEHA 413
++ V +GL YL+K H +K+ N+LL + D+ + + +
Sbjct: 122 LREVLEGLEYLHKN----GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 414 QLHMV---AYKSPE-FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ V + +PE Q G K D+WS GI +EL TG P
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320
LG G FG + G V + + + E F + + L H L+ L A
Sbjct: 26 LGQGCFGEVWMGTW-NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 321 KEEKLLVSDFVPNGSLANLLHVRRAPGQPG--LDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +++ G L + L G+ G L P + + +A G+AY+ + +
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLK-----GEMGKYLRLPQLVDMAAQIASGMAYVER----MN 134
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYKSPEFNQTDGVT 432
H L+++N+L+ + D+ L ++ ++ A+ + + +PE T
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFT 193
Query: 433 RKTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ EL T G+ P
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP 215
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 145
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 146 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 30 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 90 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 144
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 145 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 201 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 227 FVNSQNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLLTGPAMVV 282
F++ D I+K+ + E +E+ +V+G G+FG +K+ ++
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEV-------VKVIGRGAFGEVQLVRHKSTRKVYAMKLL 107
Query: 283 KRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLL--VSDFVPNGSLANLL 340
+F + F E + + P ++ L FY ++++ L V +++P G L NL+
Sbjct: 108 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM 165
Query: 341 HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLT 400
P + + + + + ++ H +K N+LLD + L
Sbjct: 166 SNYDVPEKWARFYTAEVVLALDAIHSMGFI----------HRDVKPDNMLLDKSGHLKLA 215
Query: 401 DYALVPIVNKE-----HAQLHMVAYKSPEFNQTDG----VTRKTDVWSLGILILELLTGK 451
D+ +NKE + Y SPE ++ G R+ D WS+G+ + E+L G
Sbjct: 216 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
Query: 452 FP 453
P
Sbjct: 276 TP 277
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV + V + L + G P L +IK +YL++
Sbjct: 70 LLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIP-------LPLIK------SYLFQL 115
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH-EVVTLWYRA 174
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
E +G G++G YKA G + +KR R + + E ++ L L HPN++ LI
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ + LV +F+ L +L + Q ++KI YLY+
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDS-----QIKI---------YLYQLLR 130
Query: 376 GVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE 424
GV H H LK N+L+++ L D+ L +P+ + H ++ + Y++P+
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-EVVTLWYRAPD 189
Query: 425 -FNQTDGVTRKTDVWSLGILILELLTGK--FPA 454
+ + D+WS+G + E++TGK FP
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 227 FVNSQNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLLTGPAMVV 282
F++ D I+K+ + E +E+ +V+G G+FG +K+ ++
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEV-------VKVIGRGAFGEVQLVRHKSTRKVYAMKLL 107
Query: 283 KRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLL--VSDFVPNGSLANLL 340
+F + F E + + P ++ L FY ++++ L V +++P G L NL+
Sbjct: 108 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM 165
Query: 341 HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLT 400
P + + + + + ++ H +K N+LLD + L
Sbjct: 166 SNYDVPEKWARFYTAEVVLALDAIHSMGFI----------HRDVKPDNMLLDKSGHLKLA 215
Query: 401 DYALVPIVNKE-----HAQLHMVAYKSPEFNQTDG----VTRKTDVWSLGILILELLTGK 451
D+ +NKE + Y SPE ++ G R+ D WS+G+ + E+L G
Sbjct: 216 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
Query: 452 FP 453
P
Sbjct: 276 TP 277
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + +K+ R + V E ++ L L+HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV + V + L + G P L +IK +YL++
Sbjct: 66 LLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIP-------LPLIK------SYLFQL 111
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 170
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 227 FVNSQNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLLTGPAMVV 282
F++ D I+K+ + E +E+ +V+G G+FG +K+ ++
Sbjct: 50 FLSRYKDTINKIRDLRMKAEDYEV-------VKVIGRGAFGEVQLVRHKSTRKVYAMKLL 102
Query: 283 KRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLL--VSDFVPNGSLANLL 340
+F + F E + + P ++ L FY ++++ L V +++P G L NL+
Sbjct: 103 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLM 160
Query: 341 HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLT 400
P + + + + + ++ H +K N+LLD + L
Sbjct: 161 SNYDVPEKWARFYTAEVVLALDAIHSMGFI----------HRDVKPDNMLLDKSGHLKLA 210
Query: 401 DYALVPIVNKE-----HAQLHMVAYKSPEFNQTDG----VTRKTDVWSLGILILELLTGK 451
D+ +NKE + Y SPE ++ G R+ D WS+G+ + E+L G
Sbjct: 211 DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
Query: 452 FP 453
P
Sbjct: 271 TP 272
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
E +G G++G YKA G + +KR R + + E ++ L L HPN++ LI
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ + LV +F+ L +L + Q ++KI YLY+
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDS-----QIKI---------YLYQLLR 130
Query: 376 GVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE 424
GV H H LK N+L+++ L D+ L +P+ + H ++ + Y++P+
Sbjct: 131 GVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH-EVVTLWYRAPD 189
Query: 425 -FNQTDGVTRKTDVWSLGILILELLTGK--FPA 454
+ + D+WS+G + E++TGK FP
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTG----PAMVVKRFRQMSNVGKEDFHEHM 300
+ M N+ +++ LG G F + + + A +K+ R+ + E HE
Sbjct: 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIA 80
Query: 301 TRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
+ S P ++ L Y E +L+ ++ G + +L A D +++I
Sbjct: 81 VLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEND---VIRLI 137
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHA-QL 415
K + +G+ YL++ + H LK N+LL + Y PL + D+ + + HA +L
Sbjct: 138 KQILEGVYYLHQN----NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIG--HACEL 190
Query: 416 HMV----AYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ Y +PE D +T TD+W++GI+ LLT P
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 122
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 123 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKE 294
+ D +FE L S LG G+FGS Y + TG + VK+ + +
Sbjct: 12 YACQDPTIFEERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69
Query: 295 DFHEHMTRLGSLSHPNLLPLIAFYYR--KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLD 352
DF + L +L ++ Y ++ LV +++P+G L + L RA LD
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLD 125
Query: 353 WPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI----- 407
L + KG+ YL H L + N+L+++ + D+ L +
Sbjct: 126 ASRLLLYSSQICKGMEYLGSR----RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181
Query: 408 ---VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V +E Q + Y +PE + +R++DVWS G+++ EL T
Sbjct: 182 DYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH + + + I + A+G+
Sbjct: 79 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGM 133
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L ++ + QL + +
Sbjct: 134 DYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE ++ + ++DV++ GI++ EL+TG+ P
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 8 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 68 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 122
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 123 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 178
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 179 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 5 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 65 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 119
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 120 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A +V + S + KE + R L HPN+L L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
++Y + L+ ++ P G L L D I++ +A L Y + G
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ-----KSCTFDEQRTATIMEELADALMYCH----G 141
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQTDGVTR 433
+ H +K N+LL E + D+ P + ++ + Y PE +
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK-TMCGTLDYLPPEMIEGRMHNE 200
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+W +G+L ELL G P
Sbjct: 201 KVDLWCIGVLCYELLVGNPP 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 118 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + + + R + V E ++ L L+HPN++
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 112
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 171
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 34/216 (15%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLP 313
E +G G++G YKA LTG + + + R + V E ++ L L+HPN++
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 65
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L+ + + + LV +F+ + L + G P L +IK +YL++
Sbjct: 66 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIP-------LPLIK------SYLFQL 111
Query: 374 FPGVTLPHGH------LKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKS 422
G+ H H LK N+L++ L D+ L VP+ H ++ + Y++
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRA 170
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
PE + D+WSLG + E++T + FP +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 24/204 (11%)
Query: 261 LGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
LG G+FGS Y + TG + VK+ + + DF + L +L ++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 316 AFYYR--KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
Y + E LV +++P+G L + L RA LD L + KG+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSR 130
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYKSPEF 425
H L + N+L+++ + D+ L + V +E Q + Y +PE
Sbjct: 131 ----RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APES 185
Query: 426 NQTDGVTRKTDVWSLGILILELLT 449
+ +R++DVWS G+++ EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 79 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ A + Y PE + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 189
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G A TG + VK+ +E + + H N++ + + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+YL+ + GV
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------TVCLSVLRALSYLHNQ--GVI 163
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 164 --HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 222 VDIWSLGIMVIEMIDGEPP 240
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
EV+G G+FG KA + +K+ S ++ F + +L ++HPN++ L
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 319 YRKEEKLLVSDFVPNGSLANLLH----VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
LV ++ GSL N+LH + + W ++ ++G+AYL+
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQ 122
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMV------AYKSPEFNQ 427
P + H LK N+LL L + D+ + Q HM A+ +PE +
Sbjct: 123 PKALI-HRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFE 176
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ K DV+S GI++ E++T + P
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKP 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
EV+G G+FG KA + +K+ S ++ F + +L ++HPN++ L
Sbjct: 15 EVVGRGAFGVVCKA-KWRAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 319 YRKEEKLLVSDFVPNGSLANLLH----VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
LV ++ GSL N+LH + + W ++ ++G+AYL+
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHSMQ 123
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMV------AYKSPEFNQ 427
P + H LK N+LL L + D+ + Q HM A+ +PE +
Sbjct: 124 PKALI-HRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFE 177
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ K DV+S GI++ E++T + P
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKP 203
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 18/200 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNLLPLIAFY 318
+G GSFG YK + +V + + E + +T L P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG-LDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+ + ++ +++ GS +LL +PG L+ I++ + KGL YL+ E
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-------KPGPLEETYIATILREILKGLDYLHSE---- 135
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTR 433
H +K++NVLL + L D+ + + + + + +PE +
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+WSLGI +EL G+ P
Sbjct: 196 KADIWSLGITAIELAKGEPP 215
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G FG V+L G + VK + ++ + F + + L H NL+ L+
Sbjct: 27 QTIGKGEFGD----VMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL 80
Query: 316 AFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
++ L +V++++ GSL + L R+ G+ L LK V + + YL
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL---- 133
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-VAYKSPEFNQTDGVTR 433
G H L + NVL+ ++D+ L + + V + +PE + +
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ E+ + G+ P
Sbjct: 194 KSDVWSFGILLWEIYSFGRVP 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFH 297
D +FE L S LG G+FGS Y + TG + VK+ + + DF
Sbjct: 3 QDPTIFEERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ 60
Query: 298 EHMTRLGSLSHPNLLPLIAFYYR--KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPI 355
+ L +L ++ Y ++ LV +++P+G L + L RA LD
Sbjct: 61 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASR 116
Query: 356 RLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI-------- 407
L + KG+ YL H L + N+L+++ + D+ L +
Sbjct: 117 LLLYSSQICKGMEYLGSR----RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 172
Query: 408 VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V +E Q + Y +PE + +R++DVWS G+++ EL T
Sbjct: 173 VVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 26/222 (11%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGS----SYKAVLL-TGPAMVVKRFRQMSNVGKEDFH 297
D +FE L S LG G+FGS Y + TG + VK+ + + DF
Sbjct: 2 QDPTIFEERHLKYISQ--LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ 59
Query: 298 EHMTRLGSLSHPNLLPLIAFYYR--KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPI 355
+ L +L ++ Y ++ LV +++P+G L + L RA LD
Sbjct: 60 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----RLDASR 115
Query: 356 RLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI-------- 407
L + KG+ YL H L + N+L+++ + D+ L +
Sbjct: 116 LLLYSSQICKGMEYLGSR----RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY 171
Query: 408 VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V +E Q + Y +PE + +R++DVWS G+++ EL T
Sbjct: 172 VVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 17/231 (7%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFR-QMSNVGKEDFH 297
F+ +++ EL D LG+G+ G +K +G M K ++ +
Sbjct: 12 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 71
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIR 356
+ L + P ++ +Y E + + + GSL +L R P Q I
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------IL 125
Query: 357 LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQ 414
K+ V KGL YL ++ + H +K SN+L+++ E L D+ + I + ++
Sbjct: 126 GKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 182
Query: 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANA 465
+ +Y SPE Q + ++D+WS+G+ ++E+ G++P + G G+ A
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---IGSGSGSMA 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLLTGP-----AMVVKRFRQ-MSNVGKEDFHEHMTRLGSLSHPNLL 312
EV+G+G FG + L P + +K + + + +F + +G HPN++
Sbjct: 20 EVIGAGEFGEVCRG-RLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLY 371
L +++++F+ NG+L + L R GQ + I+L +++G+A G+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTV---IQLVGMLRGIASGMRYLA 133
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV---------PIVNKEHAQLHMVAYKS 422
+ ++ H L + N+L+++ ++D+ L P + + +
Sbjct: 134 E----MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLT 449
PE T +D WS GI++ E+++
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDSTRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ A + Y PE + K
Sbjct: 128 -KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G FG V+L G + VK + ++ + F + + L H NL+ L+
Sbjct: 199 QTIGKGEFGD----VMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL 252
Query: 316 AFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
++ L +V++++ GSL + L R+ G+ L LK V + + YL
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL---- 305
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-VAYKSPEFNQTDGVTR 433
G H L + NVL+ ++D+ L + + V + +PE + +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ E+ + G+ P
Sbjct: 366 KSDVWSFGILLWEIYSFGRVP 386
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 261 LGSGSFGSSYKA------VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG YKA VL + K ++ ED+ + L S HPN++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-----EDYMVEIDILASCDHPNIVKL 99
Query: 315 I-AFYYRKEEKLLVSDFVPNGSL-ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
+ AFYY +L+ +F G++ A +L + R P + I++ + K L YL+
Sbjct: 100 LDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQV-VCKQTLDALNYLHD 153
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL----VPIVNKEHAQLHMVAYKSPEF--- 425
+ H LK+ N+L + L D+ + + + + + + +PE
Sbjct: 154 N----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 426 --NQTDGVTRKTDVWSLGILILELLTGKFPANYL 457
++ K DVWSLGI ++E+ + P + L
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G FG V+L G + VK + ++ + F + + L H NL+ L+
Sbjct: 12 QTIGKGEFGD----VMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 316 AFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
++ L +V++++ GSL + L R+ G+ L LK V + + YL
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL---- 118
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-VAYKSPEFNQTDGVTR 433
G H L + NVL+ ++D+ L + + V + +PE + +
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ E+ + G+ P
Sbjct: 179 KSDVWSFGILLWEIYSFGRVP 199
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 261 LGSGSFGSSYKA------VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG YKA VL + K ++ ED+ + L S HPN++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-----EDYMVEIDILASCDHPNIVKL 99
Query: 315 I-AFYYRKEEKLLVSDFVPNGSL-ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
+ AFYY +L+ +F G++ A +L + R P + I++ + K L YL+
Sbjct: 100 LDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQV-VCKQTLDALNYLHD 153
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL----VPIVNKEHAQLHMVAYKSPEF--- 425
+ H LK+ N+L + L D+ + + + + + + +PE
Sbjct: 154 N----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 426 --NQTDGVTRKTDVWSLGILILELLTGKFPANYL 457
++ K DVWSLGI ++E+ + P + L
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G FG V+L G + VK + ++ + F + + L H NL+ L+
Sbjct: 18 QTIGKGEFGD----VMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 316 AFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
++ L +V++++ GSL + L R+ G+ L LK V + + YL
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL---- 124
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-VAYKSPEFNQTDGVTR 433
G H L + NVL+ ++D+ L + + V + +PE + +
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFST 184
Query: 434 KTDVWSLGILILELLT-GKFP 453
K+DVWS GIL+ E+ + G+ P
Sbjct: 185 KSDVWSFGILLWEIYSFGRVP 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ A + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L R P Q I K+ V KGL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGL 120
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ--LHMVAYKSPEF 425
YL ++ + H +K SN+L+++ E L D+ + + E A + +Y SPE
Sbjct: 121 TYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPER 177
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFPANYLA 458
Q + ++D+WS+G+ ++E+ G++P +A
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMA 210
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKE--DFHEHMTRLGSLSHPNLLPLIA 316
E +G+G F A + MV + + +G + + L +L H ++ L
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+ +V ++ P G L + + Q L + + + +AY++ +
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYI-----ISQDRLSEEETRVVFRQIVSAVAYVHSQ--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALV--PIVNKE-HAQLHM--VAYKSPEFNQTDG- 430
H LK N+L D ++ L D+ L P NK+ H Q +AY +PE Q
Sbjct: 128 -GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSY 186
Query: 431 VTRKTDVWSLGILILELLTGKFP 453
+ + DVWS+GIL+ L+ G P
Sbjct: 187 LGSEADVWSMGILLYVLMCGFLP 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 46/234 (19%)
Query: 249 ELNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRF-RQMSNVGKEDFHEHMTRLGSL 306
+ D+ + ++E+LG G++ AV L G VK +Q + F E T
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 307 SHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKG 366
+ N+L LI F+ LV + + GS+ L H+++ Q + ++++ VA
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQK---QKHFNEREASRVVRDVAAA 123
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVL----------------------LDNAYEPLLTDYAL 404
L +L+ + + H LK N+L L+N+ P+ T
Sbjct: 124 LDFLHTK----GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 405 VPIVNKEHAQLHMVAYKSPEFNQ--TDGVT---RKTDVWSLGILILELLTGKFP 453
P + E Y +PE + TD T ++ D+WSLG+++ +L+G P
Sbjct: 180 TPCGSAE--------YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLLTGP-----AMVVKRFRQ-MSNVGKEDFHEHMTRLGSLSHPNLL 312
EV+G+G FG + L P + +K + + + +F + +G HPN++
Sbjct: 22 EVIGAGEFGEVCRG-RLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL-KIIKGVAKGLAYLY 371
L +++++F+ NG+L + L R GQ + I+L +++G+A G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTV---IQLVGMLRGIASGMRYLA 135
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK------EHAQLH---MVAYKS 422
+ ++ H L + N+L+++ ++D+ L + + E + L + + +
Sbjct: 136 E----MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLT 449
PE T +D WS GI++ E+++
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 14/219 (6%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRF--RQMSNVGKEDFH 297
F+ +++ EL D LG+G+ G +K ++ ++ ++ +
Sbjct: 20 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 79
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIR 356
+ L + P ++ +Y E + + + GSL +L R P Q I
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------IL 133
Query: 357 LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQ 414
K+ V KGL YL ++ + H +K SN+L+++ E L D+ + I + ++
Sbjct: 134 GKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ +Y SPE Q + ++D+WS+G+ ++E+ G++P
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G + L D I +A L+Y + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 93 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 144
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 203
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 204 VDLWSLGVLCYEFLVGKPP 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 14/219 (6%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRF--RQMSNVGKEDFH 297
F+ +++ EL D LG+G+ G +K ++ ++ ++ +
Sbjct: 55 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 114
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIR 356
+ L + P ++ +Y E + + + GSL +L R P Q I
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------IL 168
Query: 357 LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQ 414
K+ V KGL YL ++ + H +K SN+L+++ E L D+ + I + ++
Sbjct: 169 GKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 225
Query: 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ +Y SPE Q + ++D+WS+G+ ++E+ G++P
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 258 AEVLGSGSFGSSYKAVLL-TG---PAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPN 310
E LGSG F K TG A +K+ R S+ V +E+ + L + HPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ L + K + +L+ + V G L + L + + L + +K + G+ YL
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYL 145
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIV---NKEHAQLHMVAYKSP 423
+ + + H LK N++L + P L D+ + + N+ + +P
Sbjct: 146 HSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 201
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
E + + + D+WS+G++ LL+G P +L + K + VN EE+
Sbjct: 202 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGETKQETLTNISAVNYDFDEEY 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 32/214 (14%)
Query: 261 LGSGSFGSSYKA------VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG YKA VL + K ++ ED+ + L S HPN++ L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL-----EDYMVEIDILASCDHPNIVKL 99
Query: 315 I-AFYYRKEEKLLVSDFVPNGSL-ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
+ AFYY +L+ +F G++ A +L + R P + I++ + K L YL+
Sbjct: 100 LDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQV-VCKQTLDALNYLHD 153
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL----VPIVNKEHAQLHMVAYKSPEF--- 425
+ H LK+ N+L + L D+ + + + + + +PE
Sbjct: 154 N----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 426 --NQTDGVTRKTDVWSLGILILELLTGKFPANYL 457
++ K DVWSLGI ++E+ + P + L
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 77 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 128
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 187
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL-VPIVNKEHAQL-HMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ V + +L + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G + L D I +A L+Y + +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQ-----KLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEK 191
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 81 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 191
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 78 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 129
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 188
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 31 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 90
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 91 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 145
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L ++ + QL + +
Sbjct: 146 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 202 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 79 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 81 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEK 191
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY 318
E+ G FG +KA L+ + VK F + E + G + H NLL IA
Sbjct: 21 EIKARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPG-MKHENLLQFIAAE 78
Query: 319 YR----KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
R + E L++ F GSL + L + W + + +++GL+YL+++
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI------ITWNELCHVAETMSRGLSYLHEDV 132
Query: 375 PGV-------TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHAQLHMVAYK 421
P ++ H KS NVLL + +L D+ L H Q+ Y
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYM 192
Query: 422 SPEF------NQTDGVTRKTDVWSLGILILELLT 449
+PE Q D R D++++G+++ EL++
Sbjct: 193 APEVLEGAINFQRDAFLR-IDMYAMGLVLWELVS 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 96/215 (44%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 19 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y + +V+ + SL + LH + + + I + A+G+
Sbjct: 79 HVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGM 133
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L ++ + QL + +
Sbjct: 134 DYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE ++ + ++DV++ GI++ EL+TG+ P
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 23 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 83 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 137
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L ++ + QL + +
Sbjct: 138 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 25/236 (10%)
Query: 258 AEVLGSGSFGSSYKAVLL-TG---PAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPN 310
E LGSG F K TG A +K+ R S+ V +E+ + L + HPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ L + K + +L+ + V G L + L + L + +K + G+ YL
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYL 124
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIV---NKEHAQLHMVAYKSP 423
+ + + H LK N++L + P L D+ + + N+ + +P
Sbjct: 125 HSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
E + + + D+WS+G++ LL+G P +L + K + VN EE+
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGETKQETLTNISAVNYDFDEEY 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 63 HVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L + ++ + QL + +
Sbjct: 118 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 260 VLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKED--FHEHMTRLGSLSHPNLLPLIA 316
+LG GSFG K +T VK + S K+ + L L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+V + G L + + R+ + +IIK V G+ Y++K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-----ARIIKQVFSGITYMHKH--- 140
Query: 377 VTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVN---KEHAQLHMVAYKSPEFNQTDG 430
+ H LK N+LL++ + + D+ L K ++ Y +PE +
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-T 198
Query: 431 VTRKTDVWSLGILILELLTGKFP 453
K DVWS G+++ LL+G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 102 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 153
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 212
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 25/236 (10%)
Query: 258 AEVLGSGSFGSSYKAVLL-TG---PAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPN 310
E LGSG F K TG A +K+ R S+ V +E+ + L + HPN
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ L + K + +L+ + V G L + L + + L + +K + G+ YL
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHYL 131
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIV---NKEHAQLHMVAYKSP 423
+ + + H LK N++L + P L D+ + + N+ + +P
Sbjct: 132 HSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479
E + + + D+WS+G++ LL+G P +L + K + VN EE+
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASP--FLGETKQETLTNISAVNYDFDEEY 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS 307
+E+ D + +GSGSFG+ YK A+ + + + F + L
Sbjct: 3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L L Y K + +V+ + SL + LH+ + + + I + A+G+
Sbjct: 63 HVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHII----ETKFEMIKLIDIARQTAQGM 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-----EHAQLH-MVAYK 421
YL+ + ++ H LKS+N+ L + D+ L ++ + QL + +
Sbjct: 118 DYLHAK----SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 422 SPE---FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE + + ++DV++ GI++ EL+TG+ P
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHM-TRLGSLSHPNLLP 313
+VLG+G++G + + TG +K ++ + V K EH T L H P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 314 LIA---FYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLA 368
+ + ++ E KL L+ D++ G L L R + ++I G + L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH------EVQIYVGEIVLALE 173
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-IVNKEHAQLH----MVAYKSP 423
+L+K + + + +K N+LLD+ +LTD+ L V E + + + Y +P
Sbjct: 174 HLHK----LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 424 EFNQ--TDGVTRKTDVWSLGILILELLTGKFP 453
+ + G + D WSLG+L+ ELLTG P
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 259 EVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPNL 311
E LGSG F K+ L A +K+ + ++ V +E+ ++ L + HPN+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L Y + + +L+ + V G L + L + L IK + G+ YL+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHAQLHMVAYK----SP 423
+ + H LK N++L + P+ L D+ L H V +K +P
Sbjct: 133 TK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------HEIEDGVEFKNIFGTP 182
Query: 424 EFNQTDGVTRK-----TDVWSLGILILELLTGKFP 453
EF + V + D+WS+G++ LL+G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL-VPIVNKEHAQL-HMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ V + L + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 81 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 132
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL-VPIVNKEHAQL-HMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ V + L + Y PE + K
Sbjct: 133 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 191
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 192 VDLWSLGVLCYEFLVGKPP 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDF--HEHMTRLGSLSHPNLLPLIA 316
E +G GSFG +K + +V + + E + +T L +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
Y + + ++ +++ GS +LL R P D ++K + KGL YL+ E
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL--RAGP----FDEFQIATMLKEILKGLDYLHSE--- 139
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVT 432
H +K++NVLL + L D+ + + + + + +PE Q
Sbjct: 140 -KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD 198
Query: 433 RKTDVWSLGILILELLTGKFP 453
K D+WSLGI +EL G+ P
Sbjct: 199 SKADIWSLGITAIELAKGEPP 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 79 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 189
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 77 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 128
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL-VPIVNKEHAQL-HMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ V + L + Y PE + K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 187
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L R P Q I K+ V KGL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGL 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVAYKSPEF 425
YL ++ + H +K SN+L+++ E L D+ + I + ++ + +Y SPE
Sbjct: 118 TYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
Q + ++D+WS+G+ ++E+ G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L R P Q I K+ V KGL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGL 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVAYKSPEF 425
YL ++ + H +K SN+L+++ E L D+ + I + ++ + +Y SPE
Sbjct: 118 TYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
Q + ++D+WS+G+ ++E+ G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 102 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 153
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 154 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 212
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 213 VDLWSLGVLCYEFLVGKPP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 27/215 (12%)
Query: 261 LGSGSFGSSYKAVLLT------GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG + A + VK + S+ ++DFH L +L H +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLH------VRRAPGQP--GLDWPIRLKIIKGVAKG 366
+ ++V +++ +G L L V A G P L L I + +A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-------HAQLHMVA 419
+ YL + H L + N L+ + D+ + V H L +
Sbjct: 141 MVYLASQH----FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP-IR 195
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFP 453
+ PE T ++DVWSLG+++ E+ T GK P
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L +R P + I K+ V +GL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE------ILGKVSIAVLRGL 127
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVAYKSPEF 425
AYL ++ + H +K SN+L+++ E L D+ + I + ++ + +Y +PE
Sbjct: 128 AYLREKH---QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPER 184
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
Q + ++D+WS+G+ ++EL G++P
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 79 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL-VPIVNKEHAQL-HMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ V + L + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L R P Q I K+ V KGL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGL 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVAYKSPEF 425
YL ++ + H +K SN+L+++ E L D+ + I + ++ + +Y SPE
Sbjct: 118 TYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
Q + ++D+WS+G+ ++E+ G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 80 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 131
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 132 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 191 VDLWSLGVLCYEFLVGKPP 209
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L R P Q I K+ V KGL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGL 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVAYKSPEF 425
YL ++ + H +K SN+L+++ E L D+ + I + ++ + +Y SPE
Sbjct: 118 TYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
Q + ++D+WS+G+ ++E+ G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 75 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 126
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 127 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 185
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 186 VDLWSLGVLCYEFLVGKPP 204
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
Query: 261 LGSGSFGSSYKA-VLLTGPAMVVKR---FRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+G G F Y+A LL G + +K+ F M + D + + L L+HPN++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 317 FYYRKEEKLLVSDFVPNGSLANLL-----HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ E +V + G L+ ++ R P + + ++L L +++
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL------CSALEHMH 153
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQ 427
+ H +K +NV + L D L + + H + Y SPE
Sbjct: 154 SR----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+G K+D+WSLG L+ E+ + P
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 260 VLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKED--FHEHMTRLGSLSHPNLLPLIA 316
+LG GSFG K +T VK + S K+ + L L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+V + G L + + R+ + +IIK V G+ Y++K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-----ARIIKQVFSGITYMHKH--- 140
Query: 377 VTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVN---KEHAQLHMVAYKSPEFNQTDG 430
+ H LK N+LL++ + + D+ L K ++ Y +PE +
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GT 198
Query: 431 VTRKTDVWSLGILILELLTGKFP 453
K DVWS G+++ LL+G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 260 VLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKED--FHEHMTRLGSLSHPNLLPLIA 316
+LG GSFG K +T VK + S K+ + L L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+V + G L + + R+ + +IIK V G+ Y++K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA-----ARIIKQVFSGITYMHKH--- 140
Query: 377 VTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVN---KEHAQLHMVAYKSPEFNQTDG 430
+ H LK N+LL++ + + D+ L K ++ Y +PE +
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR-GT 198
Query: 431 VTRKTDVWSLGILILELLTGKFP 453
K DVWS G+++ LL+G P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 29/213 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH-------EHMTRLGSLSHPNL 311
+V+G G+FG KA + + ++M +D H E + +LG HPN+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 85
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----------PGQPGLDWPIRLKII 360
+ L+ + L ++ P+G+L + L R L L
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP----IVNKEHAQLH 416
VA+G+ YL ++ H +L + N+L+ Y + D+ L V K +L
Sbjct: 146 ADVARGMDYLSQK----QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + + E T +DVWS G+L+ E+++
Sbjct: 202 -VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 261 LGSGSFGSSY-------KAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLL 312
LG G FG+ Y K +L A+ V Q+ G E + S L HPN+L
Sbjct: 13 LGKGKFGNVYLAREKQRKFIL----ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 68
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L +++ L+ ++ P G++ R D I +A L+Y +
Sbjct: 69 RLYGYFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDG 430
+ + H +K N+LL +A E + D+ ++ ++ + Y PE +
Sbjct: 124 K----RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 431 VTRKTDVWSLGILILELLTGKFP 453
K D+WSLG+L E L GK P
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 76 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 128 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEK 186
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 187 VDLWSLGVLCYEFLVGKPP 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + VK Q+++ + + + L+HPN++ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + + + + + Y +++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQK 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
F + H LK+ N+LLD + D+ NK A Y +PE Q
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 79 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ ++ ++ + Y PE + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEK 189
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 309 PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGL 367
P ++ +Y E + + + GSL +L R P Q I K+ V KGL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGL 117
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVAYKSPEF 425
YL ++ + H +K SN+L+++ E L D+ + I + ++ + +Y SPE
Sbjct: 118 TYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPER 174
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
Q + ++D+WS+G+ ++E+ G++P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+L++ + + D+ L I + EH +
Sbjct: 153 ILRGLKYIH----SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 269 QEDLNCIINMKAR 281
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 77 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 128
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + D+ + ++ + Y PE + K
Sbjct: 129 -RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEK 187
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 188 VDLWSLGVLCYEFLVGKPP 206
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH-------EHMTRLGSLSHPNL 311
+V+G G+FG KA + + ++M +D H E + +LG HPN+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 88
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----------PGQPGLDWPIRLKII 360
+ L+ + L ++ P+G+L + L R L L
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP----IVNKEHAQLH 416
VA+G+ YL ++ H L + N+L+ Y + D+ L V K +L
Sbjct: 149 ADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + + E T +DVWS G+L+ E+++
Sbjct: 205 -VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH-------EHMTRLGSLSHPNL 311
+V+G G+FG KA + + ++M +D H E + +LG HPN+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH--HPNI 78
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----------PGQPGLDWPIRLKII 360
+ L+ + L ++ P+G+L + L R L L
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP----IVNKEHAQLH 416
VA+G+ YL ++ H L + N+L+ Y + D+ L V K +L
Sbjct: 139 ADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + + E T +DVWS G+L+ E+++
Sbjct: 195 -VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
LV ++VP GSL + L R + G L L + + +G+AYL+ + H +L
Sbjct: 95 LVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHSQH----YIHRNLA 144
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVLLDN + D+ L V + H + V + +PE + +DVW
Sbjct: 145 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 204
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 205 SFGVTLYELLT 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G G++GS K V +G M VKR R S V +++ + + L + + P I +Y
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 320 R---KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+E + + + S + + I KI K L +L KE
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL-KE--N 144
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYA----LVPIVNKEH---AQLHMVAYKSPEFNQTD 429
+ + H +K SN+LLD + L D+ LV + K + +M +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
G ++DVWSLGI + EL TG+FP
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFP 228
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 78 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 129
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + ++ ++ ++ + Y PE + K
Sbjct: 130 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 188
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 189 VDLWSLGVLCYEFLVGKPP 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAV---LLTGPAMVVKRFRQMSNVGKEDFHEH 299
N++ F N+L + LG+G+FG +A L A++ + + + D E
Sbjct: 38 NEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 300 -MTRLGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG------- 347
M+ L +SH N++ L+ L+++++ G L N L +R PG
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 348 ----QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYA 403
+ L L VA+G+A+L + H + + NVLL N + + D+
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFG 211
Query: 404 LV-PIVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
L I+N K +A+L V + +PE T ++DVWS GIL+ E+ +
Sbjct: 212 LARDIMNDSNYIVKGNARLP-VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
LV ++VP GSL + L R + G L L + + +G+AYL+ + H +L
Sbjct: 95 LVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHAQH----YIHRNLA 144
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVLLDN + D+ L V + H + V + +PE + +DVW
Sbjct: 145 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 204
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 205 SFGVTLYELLT 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 261 LGSGSFG-SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G V +G + VK+ +E + + H N++ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+ L+ + GV
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ--GVI 138
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 139 --HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 197 VDIWSLGIMVIEMVDGEPP 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 276 TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335
+G + VK +E + + H N++ + Y EE ++ +F+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY 395
L +++ Q L+ + + V + LAYL+ + GV H +KS ++LL
Sbjct: 129 LTDIV------SQVRLNEEQIATVCEAVLQALAYLHAQ--GVI--HRDIKSDSILLTLDG 178
Query: 396 EPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRKTDVWSLGILILELLTGK 451
L+D+ ++K+ + + + +PE + D+WSLGI+++E++ G+
Sbjct: 179 RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 452 FP 453
P
Sbjct: 239 PP 240
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + VK Q+++ + + L+HPN++ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + R K + + + Y +++
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA------RAKF-RQIVSAVQYCHQK 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
F + H LK+ N+LLD + D+ NK A Y +PE Q
Sbjct: 133 F----IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 189 YDGP--EVDVWSLGVILYTLVSGSLP 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 66
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 120
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 121 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
LV ++VP GSL + L R G L L + + +G+AYL+ + H L
Sbjct: 90 LVMEYVPLGSLRDYL-PRHCVGLAQL-----LLFAQQICEGMAYLHAQH----YIHRALA 139
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVLLDN + D+ L V + H + V + +PE + +DVW
Sbjct: 140 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVW 199
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 200 SFGVTLYELLT 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 261 LGSGSFG-SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G V +G + VK+ +E + + H N++ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+ L+ + GV
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ--GVI 147
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 148 --HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 206 VDIWSLGIMVIEMVDGEPP 224
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 249 ELNDLLRASAEVLGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKEDFHEHMTR 302
E +LLR VLG G +G ++ +TG AM V + + K+ H R
Sbjct: 17 ECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 303 --LGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
L + HP ++ LI + + L+ +++ G L + + R + +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLER---EGIFMEDTACFYL 127
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLH---- 416
++ L +L+++ G+ + LK N++L++ LTD+ L + H
Sbjct: 128 AEISMALGHLHQK--GII--YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ Y +PE G R D WSLG L+ ++LTG P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G+FG ++ TG K KE + + + L HP L+ L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+ E +++ +F+ G L + A + ++ ++ V KGL ++++
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHEN---- 168
Query: 378 TLPHGHLKSSNVLL--DNAYEPLLTDYALVPIVNKEHA---QLHMVAYKSPEFNQTDGVT 432
H LK N++ + E L D+ L ++ + + + +PE + V
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 433 RKTDVWSLGILILELLTGKFP 453
TD+WS+G+L LL+G P
Sbjct: 229 YYTDMWSVGVLSYILLSGLSP 249
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
LV ++VP GSL + L R G L L + + +G+AYL+ + H L
Sbjct: 89 LVMEYVPLGSLRDYL-PRHCVGLAQL-----LLFAQQICEGMAYLHAQH----YIHRALA 138
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVLLDN + D+ L V + H + V + +PE + +DVW
Sbjct: 139 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVW 198
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 199 SFGVTLYELLT 209
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 85/207 (41%), Gaps = 24/207 (11%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR-----LGSLSHPNLLP 313
+V+G GSFG A + Q + K+ +H+ L ++ HP L+
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 314 LIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYLY 371
L F ++ +KL V D++ G L L R +P R + +A L YL+
Sbjct: 104 L-HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP------RARFYAAEIASALGYLH 156
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMV-----AYKSPEFN 426
+ + + LK N+LLD+ +LTD+ L N EH Y +PE
Sbjct: 157 ----SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
R D W LG ++ E+L G P
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 261 LGSGSFG-SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G V +G + VK+ +E + + H N++ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+ L+ + GV
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ--GVI 142
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 143 --HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 201 VDIWSLGIMVIEMVDGEPP 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 249 ELNDLLRASAEVLGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKEDFHEHMTR 302
E +LLR VLG G +G ++ +TG AM V + + K+ H R
Sbjct: 17 ECFELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 303 --LGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
L + HP ++ LI + + L+ +++ G L + + R + +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLER---EGIFMEDTACFYL 127
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM--- 417
++ L +L+++ G+ + LK N++L++ LTD+ L + H
Sbjct: 128 AEISMALGHLHQK--GII--YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ Y +PE G R D WSLG L+ ++LTG P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 14/201 (6%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E LG+G+FG ++ TG K KE + + + L HP L+ L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+ E +++ +F+ G L + A + ++ ++ V KGL ++++
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHEN---- 274
Query: 378 TLPHGHLKSSNVLL--DNAYEPLLTDYALVPIVNKEHA---QLHMVAYKSPEFNQTDGVT 432
H LK N++ + E L D+ L ++ + + + +PE + V
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 433 RKTDVWSLGILILELLTGKFP 453
TD+WS+G+L LL+G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 261 LGSGSFG-SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G V +G + VK+ +E + + H N++ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+ L+ + GV
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ--GVI 149
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 150 --HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 208 VDIWSLGIMVIEMVDGEPP 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 20/205 (9%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH--EHMTRLG-SLSHPNLLPLI 315
E LG G+F + V T + + DF E R+ L HPN++ L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ LV D V G L + R + I+ + + +AY +
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSN-- 123
Query: 376 GVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQT 428
G+ H +LK N+LL + + L D+ L VN A H A Y SPE +
Sbjct: 124 GIV--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKK 180
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
D ++ D+W+ G+++ LL G P
Sbjct: 181 DPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 20/205 (9%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH--EHMTRLG-SLSHPNLLPLI 315
E LG G+F + V T + + DF E R+ L HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ LV D V G L + R + I+ + + +AY +
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSN-- 124
Query: 376 GVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQT 428
G+ H +LK N+LL + + L D+ L VN A H A Y SPE +
Sbjct: 125 GIV--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKK 181
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
D ++ D+W+ G+++ LL G P
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 20/205 (9%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH--EHMTRLG-SLSHPNLLPLI 315
E LG G+F + V T + + DF E R+ L HPN++ L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ LV D V G L + R + I+ + + +AY +
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSN-- 147
Query: 376 GVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQT 428
G+ H +LK N+LL + + L D+ L VN A H A Y SPE +
Sbjct: 148 GIV--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKK 204
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
D ++ D+W+ G+++ LL G P
Sbjct: 205 DPYSKPVDIWACGVILYILLVGYPP 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 20/205 (9%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH--EHMTRLG-SLSHPNLLPLI 315
E LG G+F + V T + + DF E R+ L HPN++ L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ LV D V G L + R + I+ + + +AY +
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HCIQQILESIAYCHSN-- 124
Query: 376 GVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQT 428
G+ H +LK N+LL + + L D+ L VN A H A Y SPE +
Sbjct: 125 GIV--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKK 181
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
D ++ D+W+ G+++ LL G P
Sbjct: 182 DPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 40/240 (16%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAV---LLTGPAMVVKRFRQMSNVGKEDFHEH 299
N++ F N+L + LG+G+FG +A L A++ + + + D E
Sbjct: 23 NEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 80
Query: 300 -MTRLGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRR--------AP 346
M+ L +SH N++ L+ L+++++ G L N L + AP
Sbjct: 81 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP 140
Query: 347 GQ--PGLD----WPIRLKII----KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE 396
GQ GLD P+ L+ + VA+G+A+L + H + + NVLL N +
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHV 196
Query: 397 PLLTDYALV-PIVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ D+ L I+N K +A+L V + +PE T ++DVWS GIL+ E+ +
Sbjct: 197 AKIGDFGLARDIMNDSNYIVKGNARLP-VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 22/205 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPL 314
E LG GSFG A V +F + K D H + R L L HP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ ++V ++ ++ +R G + + + + Y ++
Sbjct: 75 YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGR------RFFQQIICAIEYCHRH- 127
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H LK N+LLD+ + D+ L I+ + SP + + + K
Sbjct: 128 ---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVINGK 182
Query: 435 ------TDVWSLGILILELLTGKFP 453
DVWS GI++ +L G+ P
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGP---AMVVKRFRQMSNVGKEDFHEHMTRLGS-LSHPNLLPLIA 316
LG G FG+ Y A A+ V Q+ G E + S L HPN+L L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 79 YFHDATRVYLILEYAPLGTV-----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 130
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL +A E + ++ ++ ++ + Y PE + K
Sbjct: 131 -RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 189
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L GK P
Sbjct: 190 VDLWSLGVLCYEFLVGKPP 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 260 VLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNLLPLIA 316
++G GS+G K TG + +K+F + + + K+ + L L H NL+ L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+K+ LV +FV + L +L P GLD+ + K + + G+ + +
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDL---ELFPN--GLDYQVVQKYLFQIINGIGFCHSH--- 143
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----HAQLHMVAYKSPEFNQTD-GV 431
+ H +K N+L+ + L D+ + ++ Y++PE D
Sbjct: 144 -NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 432 TRKTDVWSLGILILELLTGK--FPAN 455
+ DVW++G L+ E+ G+ FP +
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
LV ++VP GSL + L R + G L L + + +G+AYL+ + H L
Sbjct: 112 LVMEYVPLGSLRDYL-PRHSIGLAQL-----LLFAQQICEGMAYLHAQH----YIHRDLA 161
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVLLDN + D+ L V + H + V + +PE + +DVW
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 222 SFGVTLYELLT 232
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV---V 68
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 122
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G++G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 40/263 (15%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGS----------SYKAVLLTGPAMVVKRFRQMS 289
F N+ F+ ++LRA +G GSFG A+ V+R ++
Sbjct: 6 FDENEDVNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVER-NEVR 60
Query: 290 NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQP 349
NV KE + + L HP L+ L + +E+ +V D + G L L +
Sbjct: 61 NVFKE-----LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE 115
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409
++L I + V L YL + + H +K N+LLD +TD+ + ++
Sbjct: 116 T----VKLFICELVM-ALDYLQNQ----RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166
Query: 410 KEHAQLHMVA----YKSPEF---NQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462
+E Q+ +A Y +PE + G + D WSLG+ ELL G+ P ++
Sbjct: 167 RE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY-HIRSSTS 224
Query: 463 ANADLATWVNSVVR--EEWTGEV 483
+ + T+ +VV W+ E+
Sbjct: 225 SKEIVHTFETTVVTYPSAWSQEM 247
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 141 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 257 QEDLNCIINLKAR 269
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 249 QEDLNCIINLKAR 261
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 261 LGSGSFG-SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G V +G + VK+ +E + + H N++ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+ L+ + GV
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ--GVI 192
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 193 --HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 251 VDIWSLGIMVIEMVDGEPP 269
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 39/251 (15%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLS-HPNLLPLIA 316
LG GSF K V + A VK R +N KE +T L HPN++ L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKE-----ITALKLCEGHPNIVKLHE 73
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
++ + LV + + G L + ++ + + +R K++ V+
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-KLVSAVS--------HMHD 124
Query: 377 VTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHM----VAYKSPEFNQTD 429
V + H LK N+L + + L + D+ + ++ L + Y +PE +
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN 184
Query: 430 GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489
G D+WSLG+++ +L+G+ P + D + S V E+ K +
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQ--------SHDRSLTCTSAV------EIMKKIKK 230
Query: 490 GTKSGEGEMLK 500
G S EGE K
Sbjct: 231 GDFSFEGEAWK 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 249 QEDLNCIINLKAR 261
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 253 QEDLNCIINLKAR 265
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 253 QEDLNCIINLKAR 265
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 253 QEDLNCIINLKAR 265
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 131 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 247 QEDLNCIINLKAR 259
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + VK Q+++ + + + L+HPN++ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + + + + + Y +++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQK 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
F + H LK+ N+LLD + D+ NK Y +PE Q
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSGSLP 212
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 249 QEDLNCIINLKAR 261
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 261 LGSGSFG-SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY 319
+G GS G V +G + VK+ +E + + H N++ + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 320 RKEEKLLVSDFVPNGSLANLL-HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+E +V +F+ G+L +++ H R Q + V + L+ L+ + GV
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-------AVCLAVLQALSVLHAQ--GVI 269
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVTRK 434
H +KS ++LL + L+D+ V+KE + + + +PE +
Sbjct: 270 --HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLGI+++E++ G+ P
Sbjct: 328 VDIWSLGIMVIEMVDGEPP 346
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + VK Q+++ + + + L+HPN++ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + + + + + Y +++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQK 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
F + H LK+ N+LLD + D+ NK Y +PE Q
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSGSLP 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 153 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 269 QEDLNCIINLKAR 281
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 138 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 254 QEDLNCIINLKAR 266
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 139 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 255 QEDLNCIINLKAR 267
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 130 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 246 QEDLNCIINLKAR 258
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 253 QEDLNCIINLKAR 265
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 135 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 251 QEDLNCIINLKAR 263
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 253 QEDLNCIINLKAR 265
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 249 QEDLNXIINLKAR 261
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 153 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 269 QEDLNCIINLKAR 281
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 133 ILRGLKYIH----SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 249 QEDLNXIINLKAR 261
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 137 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 253 QEDLNCIINLKAR 265
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 138 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 254 QEDLNCIINLKAR 266
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 135 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 251 QEDLNCIINLKAR 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + VK Q++ + + + L+HPN++ L
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + + + + + Y +++
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQK 133
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
+ + H LK+ N+LLD + D+ + NK Y +PE Q
Sbjct: 134 Y----IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 190 YDG--PEVDVWSLGVILYTLVSGSLP 213
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G GS+ + V T VK + E+ E + R G HPN++ L
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI-EILLRYGQ--HPNIITLKDV 89
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y + LV++ + G L + + ++ + + ++ + K + YL+ + GV
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQ--GV 142
Query: 378 TLPHGHLKSSNVL-LDNAYEP---LLTDYALVPIVNKEHAQLHMVAYKS----PEFNQTD 429
H LK SN+L +D + P + D+ + E+ L Y + PE +
Sbjct: 143 V--HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
G D+WSLGIL+ +L G P
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 259 EVLGS-GSFGSSYKA------VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
E++G G FG YKA VL + K ++ ED+ + L S HPN+
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL-----EDYMVEIDILASCDHPNI 69
Query: 312 LPLI-AFYYRKEEKLLVSDFVPNGSL-ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
+ L+ AFYY +L+ +F G++ A +L + R P + I++ + K L Y
Sbjct: 70 VKLLDAFYYENNLWILI-EFCAGGAVDAVMLELER----PLTESQIQV-VCKQTLDALNY 123
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-----IVNKEHAQLHMVAYKSPE 424
L+ + H LK+ N+L + L D+ + + + + + + +PE
Sbjct: 124 LHDN----KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 425 F-----NQTDGVTRKTDVWSLGILILELLTGKFPANYL 457
++ K DVWSLGI ++E+ + P + L
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 25/208 (12%)
Query: 258 AEVLGSGSFGS-SYKAVLLTGPAMVVK-----RFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
+ LG G+FG LTG + VK + R + VGK + L HP++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRHPHI 78
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L + +V ++V G L + + LD ++ + + G+ Y +
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI-----CKNGRLDEKESRRLFQQILSGVDYCH 133
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGV 431
+ + H LK NVLLD + D+ L +++ + + SP + + +
Sbjct: 134 RHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRXSCGSPNYAAPEVI 187
Query: 432 TRK------TDVWSLGILILELLTGKFP 453
+ + D+WS G+++ LL G P
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 135 ILRGLKYIH----SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 251 QEDLNCGINLKAR 263
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 80/210 (38%), Gaps = 25/210 (11%)
Query: 258 AEVLGSGSFGS----SYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLP 313
+V+G G+FG +KA ++ +F + F E + + P ++
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L + + +V +++P G L NL+ P K K +
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE----------KWAKFYTAEVVLALDA 189
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA------YKSPEFNQ 427
+ L H +K N+LLD L D+ ++ E +H Y SPE +
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD-ETGMVHCDTAVGTPDYISPEVLK 248
Query: 428 TDG----VTRKTDVWSLGILILELLTGKFP 453
+ G R+ D WS+G+ + E+L G P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLIA 316
E LG+G++ + YK + TG + +K + S G ++ + L H N++ L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQP-GLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ + + LV +F+ N L + R P GL+ + + +GLA+ ++
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-- 127
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE-FNQTD 429
+ H LK N+L++ + L D+ L +P VN +++ + Y++P+ +
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPDVLMGSR 184
Query: 430 GVTRKTDVWSLGILILELLTGK--FPA 454
+ D+WS G ++ E++TGK FP
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPG 211
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--- 419
+ +GL Y++ + H LK SN+LL+ + + D+ L + + +H +
Sbjct: 131 ILRGLKYIH----SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 420 ----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ--------GKGA 463
Y++PE + G T+ D+WS+G ++ E+L+ + FP +YL Q G
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 464 NADLATWVNSVVR 476
DL +N R
Sbjct: 247 QEDLNCIINLKAR 259
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAV---LLTGPAMVVKRFRQMSNVGKEDFHEH 299
N++ F N+L + LG+G+FG +A L A++ + + + D E
Sbjct: 38 NEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 300 -MTRLGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVR------RAPGQ 348
M+ L +SH N++ L+ L+++++ G L N L + + G+
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 349 PGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PI 407
P L+ L VA+G+A+L + H + + NVLL N + + D+ L I
Sbjct: 156 P-LELRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
Query: 408 VN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K +A+L V + +PE T ++DVWS GIL+ E+ +
Sbjct: 211 MNDSNYIVKGNARLP-VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 43/246 (17%)
Query: 229 NSQNDEISKLHFVNNDREMFELND--LLRASAEVLGSGSFGSSYKAVLLTGPAMVV---K 283
N Q D+I +L + + ND L+ E+ G GSF + YK + V
Sbjct: 5 NQQQDDIEELE----TKAVGXSNDGRFLKFDIEI-GRGSFKTVYKGLDTETTVEVAWCEL 59
Query: 284 RFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEK-------LLVSDFVPNGSL 336
+ R+++ ++ F E L L HPN ++ FY E +LV++ +G+L
Sbjct: 60 QDRKLTKSERQRFKEEAEXLKGLQHPN---IVRFYDSWESTVKGKKCIVLVTELXTSGTL 116
Query: 337 ANLLHVRRAPGQPGLDWPIRLKIIKG----VAKGLAYLYKEFPGVTLPHGHLKSSNVLLD 392
L + ++K+++ + KGL +L+ P + H LK N+ +
Sbjct: 117 KTYLKRFKV---------XKIKVLRSWCRQILKGLQFLHTRTPPII--HRDLKCDNIFIT 165
Query: 393 NAYEPL-LTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK----TDVWSLGILILEL 447
+ + D L + + A +PEF + K DV++ G LE
Sbjct: 166 GPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEEKYDESVDVYAFGXCXLEX 222
Query: 448 LTGKFP 453
T ++P
Sbjct: 223 ATSEYP 228
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 260 VLGSGSFGSSYKA-VLLTGPAMVVKRFRQMSNVGKEDFHEHMT--RLGSLS--HPNLLPL 314
VLG GSFG A V TG VK ++ + +D MT R+ SL+ HP L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ + V +FV G L + H++++ D + L +L+ +
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRR---FDEARARFYAAEIISALMFLHDK- 143
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--IVNKEHAQLHMVA--YKSPEFNQTDG 430
G+ + LK NVLLD+ L D+ + I N Y +PE Q
Sbjct: 144 -GII--YRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 431 VTRKTDVWSLGILILELLTGKFP 453
D W++G+L+ E+L G P
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 258 AEVLGSGSFGSSYKAVL--LTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPN 310
+ LG G FG KA L G A + VK ++ ++ + D L ++HP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG------------LDWPIRLK 358
++ L + LL+ ++ GSL L R G PG LD P
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG-PGYLGSGGSRNSSSLDHPDERA 146
Query: 359 IIKG--------VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410
+ G +++G+ YL + ++L H L + N+L+ + ++D+ L V +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE----MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 411 EHAQLHMVAYKSP-EFNQTDGV-----TRKTDVWSLGILILELLT 449
E + + + P ++ + + T ++DVWS G+L+ E++T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + V+ Q+++ + + + L+HPN++ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + + + + + Y +++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQK 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
F + H LK+ N+LLD + D+ NK Y +PE Q
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 189 YDGP--EVDVWSLGVILYTLVSGSLP 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAV---LLTGPAMVVKRFRQMSNVGKEDFHEH 299
N++ F N+L + LG+G+FG +A L A++ + + + D E
Sbjct: 30 NEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 87
Query: 300 -MTRLGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVR------RAPGQ 348
M+ L +SH N++ L+ L+++++ G L N L + + G+
Sbjct: 88 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 349 PGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PI 407
P L+ L VA+G+A+L + H + + NVLL N + + D+ L I
Sbjct: 148 P-LELRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
Query: 408 VN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K +A+L V + +PE T ++DVWS GIL+ E+ +
Sbjct: 203 MNDSNYIVKGNARLP-VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH-PNLLPLIA 316
E++G+G++G YK + + + ++ +E+ + + L SH N+
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 317 FYYRK------EEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
+ +K ++ LV +F GS+ +L ++ G + I I + + +GL++L
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDL--IKNTKGNTLKEEWIAY-ICREILRGLSHL 145
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYA----LVPIVNKEHAQLHMVAYKSPEFN 426
++ + H +K NVLL E L D+ L V + + + + +PE
Sbjct: 146 HQH----KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 427 QTD-----GVTRKTDVWSLGILILELLTGKFP 453
D K+D+WSLGI +E+ G P
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 24/208 (11%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVG-KEDFHEHMTRLGSLSHPNLLPLI 315
+ LG G+ G AV +T A+ VK V E+ + + L+H N+ +
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV---V 67
Query: 316 AFYYRKEE---KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
FY + E + L ++ G L + R G+ P + + G+ YL+
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFD-----RIEPDIGMPEPDAQRFFHQLMAGVVYLH- 121
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV---NKEHAQLHM---VAYKSPEF- 425
G+ + H +K N+LLD ++D+ L + N+E M + Y +PE
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + DVWS GI++ +L G+ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 258 AEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPN 310
E LGSG F K+ L A +K+ + ++ V +E+ ++ L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ L Y + + +L+ + V G L + L + + + IK + G+ YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHAQLHMVAYK----S 422
+ + + H LK N++L + P+ L D+ L H V +K +
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------HEIEDGVEFKNIFGT 181
Query: 423 PEFNQTDGVTRK-----TDVWSLGILILELLTGKFP 453
PEF + V + D+WS+G++ LL+G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G GS+ + V T VK + E+ E + R G HPN++ L
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI-EILLRYGQ--HPNIITLKDV 89
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y + LV++ + G L + + ++ + + ++ + K + YL+ + GV
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLHSQ--GV 142
Query: 378 TLPHGHLKSSNVL-LDNAYEP---LLTDYALVPIVNKEHAQLHMVAYKS----PEFNQTD 429
H LK SN+L +D + P + D+ + E+ L Y + PE +
Sbjct: 143 V--HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
G D+WSLGIL+ +L G P
Sbjct: 201 GYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 241 VNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMV-VKRFRQ-MSNVGKEDFHE 298
V D+ + DL+ E +G G+FG + L +V VK R+ + K F +
Sbjct: 104 VPKDKWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
L SHPN++ LI +K+ +V + V G L A L L+
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQ 217
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ---- 414
++ A G+ YL + H L + N L+ ++D+ + ++E A
Sbjct: 218 MVGDAAAGMEYLESK----CCIHRDLAARNCLVTEKNVLKISDFGM----SREEADGVYA 269
Query: 415 ----LHMVAYK--SPEFNQTDGVTRKTDVWSLGILILELLT 449
L V K +PE + ++DVWS GIL+ E +
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 259 EVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPNL 311
E LGSG F K+ L A +K+ + ++ V +E+ ++ L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L Y + + +L+ + V G L + L + L IK + G+ YL+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHAQLHMVAYK----SP 423
+ + H LK N++L + P+ L D+ L H V +K +P
Sbjct: 133 TK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------HEIEDGVEFKNIFGTP 182
Query: 424 EFNQTDGVTRK-----TDVWSLGILILELLTGKFP 453
EF + V + D+WS+G++ LL+G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 26/221 (11%)
Query: 241 VNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMV-VKRFRQ-MSNVGKEDFHE 298
V D+ + DL+ E +G G+FG + L +V VK R+ + K F +
Sbjct: 104 VPKDKWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQ 161
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
L SHPN++ LI +K+ +V + V G L A L L+
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQ 217
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ---- 414
++ A G+ YL + H L + N L+ ++D+ + ++E A
Sbjct: 218 MVGDAAAGMEYLESK----CCIHRDLAARNCLVTEKNVLKISDFGM----SREEADGVXA 269
Query: 415 ----LHMVAYK--SPEFNQTDGVTRKTDVWSLGILILELLT 449
L V K +PE + ++DVWS GIL+ E +
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 31/218 (14%)
Query: 261 LGSGSFGSSYKA----VLLTGPAMVV--KRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG + A +L M+V K ++ S ++DF L L H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVR------------RAPGQPGLDWPIRLKIIKG 362
L+V +++ +G L L APG GL L +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAVASQ 137
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQ-----LH 416
VA G+ YL G+ H L + N L+ + D+ + I + ++ + +
Sbjct: 138 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFP 453
+ + PE T ++DVWS G+++ E+ T GK P
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 24/207 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K ++ V K++ +T L + HP L
Sbjct: 154 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSALDYL 264
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ E + + LK N++LD +TD+ L K+ A + Y +PE
Sbjct: 265 HSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 24/207 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K ++ V K++ +T L + HP L
Sbjct: 157 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSALDYL 267
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ E + + LK N++LD +TD+ L K+ A + Y +PE
Sbjct: 268 HSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 258 AEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPN 310
E LGSG F K+ L A +K+ + ++ V +E+ ++ L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ L Y + + +L+ + V G L + L + + + IK + G+ YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT-----SFIKQILDGVNYL 131
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHAQLHMV----AYKS 422
+ + + H LK N++L + P+ L D+ L + ++ + + + +
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIFGTPEFVA 186
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + + + D+WS+G++ LL+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 31/218 (14%)
Query: 261 LGSGSFGSSYKA----VLLTGPAMVV--KRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG + A +L M+V K ++ S ++DF L L H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVR------------RAPGQPGLDWPIRLKIIKG 362
L+V +++ +G L L APG GL L +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAVASQ 143
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQ-----LH 416
VA G+ YL G+ H L + N L+ + D+ + I + ++ + +
Sbjct: 144 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFP 453
+ + PE T ++DVWS G+++ E+ T GK P
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 25/209 (11%)
Query: 259 EVLGSGSFGSSYKAVL--------LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN 310
E LG G+F +K V L +++K + E F E + + LSH +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
L+ + +E +LV +FV GSL L ++ + W + VAK LA+
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLE------VAKQLAWA 125
Query: 371 YKEFPGVTLPHGHLKSSNVLL------DNAYEPL--LTDYALVPIVNKEHAQLHMVAYKS 422
TL HG++ + N+LL P L+D + V + + +
Sbjct: 126 MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTG 450
PE + TD WS G + E+ +G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 24/207 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K ++ V K++ +T L + HP L
Sbjct: 14 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSALDYL 124
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ E + + LK N++LD +TD+ L K+ A + Y +PE
Sbjct: 125 HSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + V+ Q+++ + + + L+HPN++ L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ LV ++ G + + L H R + + + + + Y +++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQK 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
F + H LK+ N+LLD + D+ NK Y +PE Q
Sbjct: 133 F----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 189 YDGP--EVDVWSLGVILYTLVSGSLP 212
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 262 GSGSFGS-SYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY- 319
G G+FG+ TG ++ +K+ Q + + M L L HPN++ L +++Y
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLAVLHHPNIVQLQSYFYT 90
Query: 320 -----RKEEKL-LVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKI-IKGVAKGLAYL 370
R++ L +V ++VP+ +L + RR P PI +K+ + + + + L
Sbjct: 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPP----PILIKVFLFQLIRSIGCL 145
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPEF- 425
+ P V + H +K NVL++ A L L D+ ++ + + Y++PE
Sbjct: 146 H--LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELI 203
Query: 426 --NQTDGVTRKTDVWSLGILILELLTGK 451
NQ T D+WS+G + E++ G+
Sbjct: 204 FGNQH--YTTAVDIWSVGCIFAEMMLGE 229
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 259 EVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPNL 311
E LGSG F K+ L A +K+ + ++ V +E+ ++ L + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L Y + + +L+ + V G L + L + L IK + G+ YL+
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHAQLHMVAYK----SP 423
+ + H LK N++L + P+ L D+ L H V +K +P
Sbjct: 133 TK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------HEIEDGVEFKNIFGTP 182
Query: 424 EFNQTDGVTRK-----TDVWSLGILILELLTGKFP 453
EF + V + D+WS+G++ LL+G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 24/207 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K ++ V K++ +T L + HP L
Sbjct: 15 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSALDYL 125
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ E + + LK N++LD +TD+ L K+ A + Y +PE
Sbjct: 126 HSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 38/225 (16%)
Query: 258 AEVLGSGSFGSSYKAVL--LTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPN 310
+ LG G FG KA L G A + VK ++ ++ + D L ++HP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG------------LDWPIRLK 358
++ L + LL+ ++ GSL L R G PG LD P
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG-PGYLGSGGSRNSSSLDHPDERA 146
Query: 359 IIKG--------VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410
+ G +++G+ YL + + L H L + N+L+ + ++D+ L V +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE----MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 411 EHAQLHM------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
E + + V + + E T ++DVWS G+L+ E++T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 24/207 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K ++ V K++ +T L + HP L
Sbjct: 16 KLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED------RARFYGAEIVSALDYL 126
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ E + + LK N++LD +TD+ L K+ A + Y +PE
Sbjct: 127 HSE---KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 31/218 (14%)
Query: 261 LGSGSFGSSYKA----VLLTGPAMVV--KRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG + A +L M+V K ++ S ++DF L L H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVR------------RAPGQPGLDWPIRLKIIKG 362
L+V +++ +G L L APG GL L +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG--QLLAVASQ 166
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQ-----LH 416
VA G+ YL G+ H L + N L+ + D+ + I + ++ + +
Sbjct: 167 VAAGMVYL----AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 417 MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFP 453
+ + PE T ++DVWS G+++ E+ T GK P
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 258 AEVLGSGSFG----SSYKAVLLTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPN 310
E LGSG F K+ L A +K+ + ++ V +E+ ++ L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
++ L Y + + +L+ + V G L + L + + L IK + G+ YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNYL 131
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPL----LTDYALVPIVNKEHAQLHMVAYK----S 422
+ + + H LK N++L + P+ L D+ L H V +K +
Sbjct: 132 HTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA------HEIEDGVEFKNIFGT 181
Query: 423 PEFNQTDGVTRK-----TDVWSLGILILELLTGKFP 453
PEF + V + D+WS+G++ LL+G P
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA-------MVVKRFR-QMSNVGKEDF-HEHMTRLGSLSHP 309
E LG FG YK L GPA + +K + + +E+F HE M R L HP
Sbjct: 15 EELGEDRFGKVYKGHLF-GPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLR-ARLQHP 72
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG------------QPGLDWPIRL 357
N++ L+ + + ++ + +G L L V R+P + L+ P +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA---- 413
++ +A G+ YL + H L + NVL+ + ++D L V
Sbjct: 132 HLVAQIAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 414 --QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
L + + +PE + +D+WS G+++ E+ +
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 21/202 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + S + KE + R L HPN+L +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 317 FYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+++ ++ L+ +F P G L L H R D ++ +A L Y ++
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHER- 134
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQTDGV 431
+ H +K N+L+ E + D+ P + + + Y PE +
Sbjct: 135 ---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-XMCGTLDYLPPEMIEGKTH 190
Query: 432 TRKTDVWSLGILILELLTGKFP 453
K D+W G+L E L G P
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 21/202 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + S + KE + R L HPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 317 FYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+++ ++ L+ +F P G L L H R D ++ +A L Y ++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR-------FDEQRSATFMEELADALHYCHER- 133
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQTDGV 431
+ H +K N+L+ E + D+ P + + + Y PE +
Sbjct: 134 ---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-XMCGTLDYLPPEMIEGKTH 189
Query: 432 TRKTDVWSLGILILELLTGKFP 453
K D+W G+L E L G P
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 38/225 (16%)
Query: 258 AEVLGSGSFGSSYKAVL--LTGPA----MVVKRFRQMSNVGK-EDFHEHMTRLGSLSHPN 310
+ LG G FG KA L G A + VK ++ ++ + D L ++HP+
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPG------------LDWPIRLK 358
++ L + LL+ ++ GSL L R G PG LD P
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG-PGYLGSGGSRNSSSLDHPDERA 146
Query: 359 IIKG--------VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410
+ G +++G+ YL + + L H L + N+L+ + ++D+ L V +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAE----MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 411 EHAQLHM------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
E + + V + + E T ++DVWS G+L+ E++T
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 34/218 (15%)
Query: 259 EVLGSGSFGSSYKAVLLTGPA-------MVVKRFR-QMSNVGKEDF-HEHMTRLGSLSHP 309
E LG FG YK L GPA + +K + + +E+F HE M R L HP
Sbjct: 32 EELGEDRFGKVYKGHLF-GPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLR-ARLQHP 89
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG------------QPGLDWPIRL 357
N++ L+ + + ++ + +G L L V R+P + L+ P +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL-VMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA---- 413
++ +A G+ YL + H L + NVL+ + ++D L V
Sbjct: 149 HLVAQIAAGMEYLSSHH----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 414 --QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
L + + +PE + +D+WS G+++ E+ +
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
SL+H +++ F+ + +V + SL L R+A +P + +R +
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIV 125
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----Y 420
G YL++ + H LK N+ L+ E + D+ L V + + ++ Y
Sbjct: 126 LGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE G + + DVWS+G ++ LL GK P
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 17/200 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + S + KE + R L HPN+L +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ ++ L+ +F P G L L D ++ +A L Y ++
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHER--- 133
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQTDGVTR 433
+ H +K N+L+ E + D+ P + + + Y PE +
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR-XMCGTLDYLPPEMIEGKTHDE 191
Query: 434 KTDVWSLGILILELLTGKFP 453
K D+W G+L E L G P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPP 211
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKED------FHEHMTRLGSLSHPNLL 312
E +G G++G YKA G +K+ R + KED ++ L L H N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + K+ +LV + + + L LL V + GL+ + + G+AY +
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE-FN 426
+ H LK N+L++ E + D+ L +P+ H ++ + Y++P+
Sbjct: 119 R----RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EIVTLWYRAPDVLM 173
Query: 427 QTDGVTRKTDVWSLGILILELLTGK--FPA 454
+ + D+WS+G + E++ G FP
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + VK Q+++ + + + L+HPN++ L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
++ LV ++ G + + L + R + + Y +++F
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVSAVQYCHQKF- 126
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ---TD 429
+ H LK+ N+LLD + D+ NK Y +PE Q D
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
G + DVWSLG+++ L++G P
Sbjct: 184 G--PEVDVWSLGVILYTLVSGSLP 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 80 YFHDATRVYLILEYAPLGTV-----YRELQKLSRFDEQRTATYITELANALSYCHSK--- 131
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL + E + D+ ++ ++ + Y PE + K
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEK 190
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L G P
Sbjct: 191 VDLWSLGVLCYEFLVGMPP 209
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKED--FHEHMTRLGSLSHPNLLPLIAF 317
LG G++G K + +G M VKR R N ++ + + ++ P +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+R+ + + + + + SL GQ + I KI + K L +L+ + +
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALEHLHSK---L 129
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYA----LVPIVNKE---HAQLHMVAYK-SPEFNQTD 429
++ H +K SNVL++ + + D+ LV V K+ + +M + +PE NQ
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK- 188
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
G + K+D+WSLGI ++EL +FP
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFP 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLPLIA 316
LG G FG+ Y A ++ + + + K + R L HPN+L L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+++ L+ ++ P G++ R D I +A L+Y + +
Sbjct: 80 YFHDATRVYLILEYAPLGTV-----YRELQKLSRFDEQRTATYITELANALSYCHSK--- 131
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRK 434
+ H +K N+LL + E + D+ ++ ++ + Y PE + K
Sbjct: 132 -RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK 190
Query: 435 TDVWSLGILILELLTGKFP 453
D+WSLG+L E L G P
Sbjct: 191 VDLWSLGVLCYEFLVGMPP 209
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKED------FHEHMTRLGSLSHPNLL 312
E +G G++G YKA G +K+ R + KED ++ L L H N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + K+ +LV + + + L LL V + GL+ + + G+AY +
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE-FN 426
+ H LK N+L++ E + D+ L +P+ H ++ + Y++P+
Sbjct: 119 R----RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EVVTLWYRAPDVLM 173
Query: 427 QTDGVTRKTDVWSLGILILELLTGK--FPA 454
+ + D+WS+G + E++ G FP
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPG 203
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKED------FHEHMTRLGSLSHPNLL 312
E +G G++G YKA G +K+ R + KED ++ L L H N++
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
L + K+ +LV + + + L LL V + GL+ + + G+AY +
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE-FN 426
+ H LK N+L++ E + D+ L +P+ H ++ + Y++P+
Sbjct: 119 R----RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EVVTLWYRAPDVLM 173
Query: 427 QTDGVTRKTDVWSLGILILELLTGK--FPA 454
+ + D+WS+G + E++ G FP
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 259 EVLGSGSFGSSYKAVL--------LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN 310
E LG G+F +K V L +++K + E F E + + LSH +
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
L+ +E +LV +FV GSL L ++ + W +L++ K +A + +L
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 371 YKEFPGVTLPHGHLKSSNVLL------DNAYEPL--LTDYALVPIVNKEHAQLHMVAYKS 422
+ TL HG++ + N+LL P L+D + V + + +
Sbjct: 130 EEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 423 PE-FNQTDGVTRKTDVWSLGILILELLTG 450
PE + TD WS G + E+ +G
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEH 299
+E++ LL + LGSG+FG+ K + + + N K++
Sbjct: 3 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 62
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKI 359
+ L +P ++ +I E +LV + G L L R + +++
Sbjct: 63 ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IEL 116
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQL 415
+ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 117 VHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 416 H---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKED--FHEHMTRLGSLSHPNLLPLIAF 317
LG G++G K + +G M VKR R N ++ + + ++ P +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+R+ + + + + + SL GQ + I KI + K L +L+ + +
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALEHLHSK---L 173
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYA----LVPIVNKE---HAQLHMVAYK-SPEFNQTD 429
++ H +K SNVL++ + + D+ LV V K + +M + +PE NQ
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK- 232
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
G + K+D+WSLGI ++EL +FP
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFP 256
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 28/218 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHE 298
DR++ L D + LGSG+FG+ K + + + N K++
Sbjct: 4 DRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 57
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ L +P ++ +I E +LV + G L L R + ++
Sbjct: 58 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IE 111
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQ 414
++ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 112 LVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 415 LH---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 28/218 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHE 298
DR++ L D + LGSG+FG+ K + + + N K++
Sbjct: 2 DRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 55
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ L +P ++ +I E +LV + G L L R + ++
Sbjct: 56 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IE 109
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQ 414
++ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 110 LVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 415 LHM---VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAM----VVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
LG G F Y+ + + VV + + KE + SL +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F+ + +V + SL L R+A +P + +R I +G+ YL+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVT 432
+ H LK N+ L++ + + D+ L + + + + Y +PE G +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHS 220
Query: 433 RKTDVWSLGILILELLTGKFP 453
+ D+WSLG ++ LL GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
SL+H +++ F+ + +V + SL L R+A +P + +R ++
Sbjct: 95 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL---- 150
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----Y 420
G YL++ + H LK N+ L+ E + D+ L V + + ++ Y
Sbjct: 151 -GCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 205
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE G + + DVWS+G ++ LL GK P
Sbjct: 206 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPI 355
F + LSH N++ +I + LV +++ +L+ + + G +D I
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAI 114
Query: 356 RL--KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN---- 409
+I+ G+ K + + H +K N+L+D+ + D+ + ++
Sbjct: 115 NFTNQILDGI--------KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166
Query: 410 -KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPAN 455
+ + L V Y SPE + + TD++S+GI++ E+L G+ P N
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 29/204 (14%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+G GS+G +K TG + +K+F + + V K+ + L L HPNL+ L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+ RK LV ++ + L L +R G P ++K + ++ V
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQR--GVPE-------HLVKSIT------WQTLQAV 115
Query: 378 TLPHGH------LKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQLHMVAYKSPEFNQ 427
H H +K N+L+ L D+ ++ + ++ Y+SPE
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLV 175
Query: 428 TDG-VTRKTDVWSLGILILELLTG 450
D DVW++G + ELL+G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAM----VVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
LG G F Y+ + + VV + + KE + SL +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F+ + +V + SL L R+A +P + +R I +G+ YL+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVT 432
+ H LK N+ L++ + + D+ L + + + + Y +PE G +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHS 220
Query: 433 RKTDVWSLGILILELLTGKFP 453
+ D+WSLG ++ LL GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 32/215 (14%)
Query: 260 VLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNV-GKEDFHEHMTRLGSLSHPNLLPL 314
+LG G FG Y+ V + VK ++ + KE F + +L HP+++ L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK------GVAKGLA 368
I +E ++ + P G L + L + LK++ + K +A
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKN----------SLKVLTLVLYSLQICKAMA 123
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-----YKSP 423
YL + H + N+L+ + L D+ L + E V + SP
Sbjct: 124 YL----ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 424 EFNQTDGVTRKTDVWSLGILILELLT-GKFPANYL 457
E T +DVW + + E+L+ GK P +L
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 32/215 (14%)
Query: 260 VLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNV-GKEDFHEHMTRLGSLSHPNLLPL 314
+LG G FG Y+ V + VK ++ + KE F + +L HP+++ L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK------GVAKGLA 368
I +E ++ + P G L + L + LK++ + K +A
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKN----------SLKVLTLVLYSLQICKAMA 127
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-----YKSP 423
YL + H + N+L+ + L D+ L + E V + SP
Sbjct: 128 YL----ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 424 EFNQTDGVTRKTDVWSLGILILELLT-GKFPANYL 457
E T +DVW + + E+L+ GK P +L
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEH 299
+E++ LL + LGSG+FG+ K + + + N K++
Sbjct: 19 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 78
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKI 359
+ L +P ++ +I E +LV + G L L R + +++
Sbjct: 79 ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IEL 132
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQL 415
+ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 133 VHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 416 H---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEH 299
+E++ LL + LGSG+FG+ K + + + N K++
Sbjct: 19 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 78
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKI 359
+ L +P ++ +I E +LV + G L L R + +++
Sbjct: 79 ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IEL 132
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQL 415
+ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 133 VHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 416 H---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEH 299
+E++ LL + LGSG+FG+ K + + + N K++
Sbjct: 3 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 62
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKI 359
+ L +P ++ +I E +LV + G L L R + +++
Sbjct: 63 ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IEL 116
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQL 415
+ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 117 VHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 416 H---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
SL+H +++ F+ + +V + SL L R+A +P + +R ++
Sbjct: 97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL---- 152
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----Y 420
G YL++ + H LK N+ L+ E + D+ L V + + ++ Y
Sbjct: 153 -GCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 207
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE G + + DVWS+G ++ LL GK P
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEH 299
+E++ LL + LGSG+FG+ K + + + N K++
Sbjct: 9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 68
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKI 359
+ L +P ++ +I E +LV + G L L R + +++
Sbjct: 69 ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IEL 122
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQL 415
+ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 123 VHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 416 H---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAM----VVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
LG G F Y+ + + VV + + KE + SL +P+++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F+ + +V + SL L R+A +P + +R I +G+ YL+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 145
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVT 432
+ H LK N+ L++ + + D+ L + + + + Y +PE G +
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 204
Query: 433 RKTDVWSLGILILELLTGKFP 453
+ D+WSLG ++ LL GK P
Sbjct: 205 FEVDIWSLGCILYTLLVGKPP 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHEH 299
+E++ LL + LGSG+FG+ K + + + N K++
Sbjct: 17 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 76
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKI 359
+ L +P ++ +I E +LV + G L L R + +++
Sbjct: 77 ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IEL 130
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQL 415
+ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 131 VHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 416 H---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 32/215 (14%)
Query: 260 VLGSGSFGSSYKAVLLTGPA----MVVKRFRQMSNV-GKEDFHEHMTRLGSLSHPNLLPL 314
+LG G FG Y+ V + VK ++ + KE F + +L HP+++ L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIK------GVAKGLA 368
I +E ++ + P G L + L + LK++ + K +A
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKN----------SLKVLTLVLYSLQICKAMA 139
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-----YKSP 423
YL + H + N+L+ + L D+ L + E V + SP
Sbjct: 140 YL----ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 424 EFNQTDGVTRKTDVWSLGILILELLT-GKFPANYL 457
E T +DVW + + E+L+ GK P +L
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
SL+H +++ F+ + +V + SL L R+A +P + +R +
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIV 127
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----Y 420
G YL++ + H LK N+ L+ E + D+ L V + + + Y
Sbjct: 128 LGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNY 183
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE G + + DVWS+G ++ LL GK P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
SL+H +++ F+ + +V + SL L R+A +P + +R +
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-----QIV 127
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----Y 420
G YL++ + H LK N+ L+ E + D+ L V + + + Y
Sbjct: 128 LGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNY 183
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE G + + DVWS+G ++ LL GK P
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 22/206 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
+ LG GSFG A T V + + K D + R L L HP+++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L K+E ++V ++ N ++ + Q + + + + Y ++
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCHRH 132
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTR 433
+ H LK N+LLD + D+ L I+ + SP + + ++
Sbjct: 133 ----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVISG 186
Query: 434 K------TDVWSLGILILELLTGKFP 453
K DVWS G+++ +L + P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + L+H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 156 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 261
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 22/206 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
+ LG GSFG A T V + + K D + R L L HP+++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L K+E ++V ++ N ++ + Q + + + + Y ++
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCHRH 131
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTR 433
+ H LK N+LLD + D+ L I+ + SP + + ++
Sbjct: 132 ----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVISG 185
Query: 434 K------TDVWSLGILILELLTGKFP 453
K DVWS G+++ +L + P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Query: 305 SLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA 364
SL+H +++ F+ + +V + SL L R+A +P + +R ++
Sbjct: 77 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVL---- 132
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----Y 420
G YL++ + H LK N+ L+ E + D+ L V + + + Y
Sbjct: 133 -GCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNY 187
Query: 421 KSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+PE G + + DVWS+G ++ LL GK P
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 261 LGSGSFGSSYKAVLLTGPAM----VVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
LG G F Y+ + + VV + + KE + SL +P+++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
F+ + +V + SL L R+A +P + +R I +G+ YL+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTDGVT 432
+ H LK N+ L++ + + D+ L + + + + Y +PE G +
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHS 220
Query: 433 RKTDVWSLGILILELLTGKFP 453
+ D+WSLG ++ LL GK P
Sbjct: 221 FEVDIWSLGCILYTLLVGKPP 241
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKL-------LVSDFVPNGSLANLLHVRRAPGQ 348
F +L+HP + +A Y E + +V ++V +L +++H
Sbjct: 59 FRREAQNAAALNHPAI---VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----- 110
Query: 349 PGLDWPIR-LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407
G P R +++I + L + ++ G+ H +K +N+L+ + D+ +
Sbjct: 111 -GPMTPKRAIEVIADACQALNFSHQN--GII--HRDVKPANILISATNAVKVVDFGIARA 165
Query: 408 -------VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
V + A + Y SPE + D V ++DV+SLG ++ E+LTG+ P
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 18/209 (8%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVK-----RFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
EV+G G+F + + TG VK +F + ED + L HP++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L+ Y +V +F+ L + V+RA + ++ + + L Y +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 372 KEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKEH----AQLHMVAYKSPE 424
+ H +K NVLL +N+ L D+ + + + ++ + +PE
Sbjct: 148 DN----NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + + DVW G+++ LL+G P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + L+H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 170 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 275
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 27/213 (12%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
AE LG G FG ++ V + + +F ++ + + ++ L H N+L L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+ EE +++ +F+ + R L+ + + V + L +L+ G
Sbjct: 70 FESMEELVMIFEFISGLDIFE----RINTSAFELNEREIVSYVHQVCEALQFLHSHNIG- 124
Query: 378 TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA---------QLHMVA--YKSPEFN 426
H ++ N++ + + I+ A +L A Y +PE +
Sbjct: 125 ---HFDIRPENIIYQTRRS------STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH 175
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFPANYLAQ 459
Q D V+ TD+WSLG L+ LL+G P +LA+
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINP--FLAE 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 22/206 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
+ LG GSFG A T V + + K D + R L L HP+++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L K+E ++V ++ N ++ + Q + + + + Y ++
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCHRH 126
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTR 433
+ H LK N+LLD + D+ L I+ + SP + + ++
Sbjct: 127 ----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVISG 180
Query: 434 K------TDVWSLGILILELLTGKFP 453
K DVWS G+++ +L + P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKL-------LVSDFVPNGSLANLLHVRRAPGQ 348
F +L+HP + +A Y E + +V ++V +L +++H
Sbjct: 59 FRREAQNAAALNHPAI---VAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----- 110
Query: 349 PGLDWPIR-LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407
G P R +++I + L + ++ G+ H +K +N+++ + D+ +
Sbjct: 111 -GPMTPKRAIEVIADACQALNFSHQN--GII--HRDVKPANIMISATNAVKVMDFGIARA 165
Query: 408 -------VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
V + A + Y SPE + D V ++DV+SLG ++ E+LTG+ P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 24/219 (10%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRL 303
D+++F D L + LG G+FGS + V + + + ++ E M R
Sbjct: 1 DKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 60
Query: 304 GSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIR--L 357
+ H P ++ LI + E +LV + G L L +R + P+
Sbjct: 61 AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE------EIPVSNVA 113
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM 417
+++ V+ G+ YL ++ H L + NVLL N + ++D+ L + + +
Sbjct: 114 ELLHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 169
Query: 418 -------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE + ++DVWS G+ + E L+
Sbjct: 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR-------LGSLSHPNLLP 313
+G G++G +KA L V R G+E R L + HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 314 L-----IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLA 368
L ++ R+ + LV + V + L L + P +PG+ ++ + +GL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD--KVP-EPGVPTETIKDMMFQLLRGLD 134
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEF 425
+L+ + H LK N+L+ ++ + L D+ L I + + A +V Y++PE
Sbjct: 135 FLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK 451
D+WS+G + E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 315 IAFYYRKEEKL-LVSDFVPNGSLA-NLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
+A+ Y ++ L LV + G L ++ H+ GQ G + + GL L++
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHM----GQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQTD 429
E + + LK N+LLD+ ++D L VP ++ V Y +PE + +
Sbjct: 305 E----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE 360
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
T D W+LG L+ E++ G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-YKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E A Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-YKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E A Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 42/227 (18%)
Query: 258 AEVLGSGSFGSSYKAVLL----TGPAM--VVKRFRQMSNVGKEDFH----EHMTRLGSLS 307
+VLGSG+FG A TG ++ VK ++ ++ + + + MT+LGS
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS-- 107
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAP---------GQPGLDWPIRLK 358
H N++ L+ L+ ++ G L N L +R Q L+ L
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 359 IIK---------GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--- 406
++ VAKG+ +L EF H L + NVL+ + + D+ L
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFL--EFKSCV--HRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 407 ----IVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +A+L V + +PE T K+DVWS GIL+ E+ +
Sbjct: 224 SDSNYVVRGNARLP-VKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR-------LGSLSHPNLLP 313
+G G++G +KA L V R G+E R L + HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 314 L-----IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLA 368
L ++ R+ + LV + V + L L + P +PG+ ++ + +GL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD--KVP-EPGVPTETIKDMMFQLLRGLD 134
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEF 425
+L+ + H LK N+L+ ++ + L D+ L I + + A +V Y++PE
Sbjct: 135 FLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK 451
D+WS+G + E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 315 IAFYYRKEEKL-LVSDFVPNGSLA-NLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
+A+ Y ++ L LV + G L ++ H+ GQ G + + GL L++
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHM----GQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQTD 429
E + + LK N+LLD+ ++D L VP ++ V Y +PE + +
Sbjct: 305 E----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE 360
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
T D W+LG L+ E++ G+ P
Sbjct: 361 RYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + +K Q++ + + + L+HPN++ L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ L+ ++ G + + L H R + + + + + Y +++
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-------RQIVSAVQYCHQK 133
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
+ H LK+ N+LLD + D+ + K A Y +PE Q
Sbjct: 134 ----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 190 YDG--PEVDVWSLGVILYTLVSGSLP 213
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 22/207 (10%)
Query: 259 EVLGSGSFGSSYKA-VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
EVLGSG+F + LTG +K ++ + L + H N++ L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
Y LV V G L + + R + +I+ V + YL++ G+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-----VIQQVLSAVKYLHEN--GI 127
Query: 378 TLPHGHLKSSNVLLDNAYE---PLLTDYALVPIVNKEHAQLHMVA-----YKSPEFNQTD 429
H LK N+L E ++TD+ L + E + A Y +PE
Sbjct: 128 V--HRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 430 GVTRKTDVWSLGILILELLTGKFPANY 456
++ D WS+G++ LL G +P Y
Sbjct: 183 PYSKAVDCWSIGVITYILLCG-YPPFY 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKL-------LVSDFVPNGSLANLLHVRRAPGQ 348
F +L+HP + +A Y E + +V ++V +L +++H
Sbjct: 59 FRREAQNAAALNHPAI---VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----- 110
Query: 349 PGLDWPIR-LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407
G P R +++I + L + ++ G+ H +K +N+++ + D+ +
Sbjct: 111 -GPMTPKRAIEVIADACQALNFSHQN--GII--HRDVKPANIMISATNAVKVMDFGIARA 165
Query: 408 -------VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
V + A + Y SPE + D V ++DV+SLG ++ E+LTG+ P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 79/206 (38%), Gaps = 22/206 (10%)
Query: 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR----LGSLSHPNLLP 313
+ LG GSFG A T V + + K D + R L L HP+++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
L K+E ++V ++ N ++ + Q + + + + Y ++
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCHRH 122
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTR 433
+ H LK N+LLD + D+ L I+ + SP + + ++
Sbjct: 123 ----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--GNFLKTSCGSPNYAAPEVISG 176
Query: 434 K------TDVWSLGILILELLTGKFP 453
K DVWS G+++ +L + P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKL-------LVSDFVPNGSLANLLHVRRAPGQ 348
F +L+HP + +A Y E + +V ++V +L +++H
Sbjct: 59 FRREAQNAAALNHPAI---VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----- 110
Query: 349 PGLDWPIR-LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407
G P R +++I + L + ++ G+ H +K +N+++ + D+ +
Sbjct: 111 -GPMTPKRAIEVIADACQALNFSHQN--GII--HRDVKPANIMISATNAVKVMDFGIARA 165
Query: 408 -------VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
V + A + Y SPE + D V ++DV+SLG ++ E+LTG+ P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 252 DLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKE-----------DFHEHM 300
DLLR V+G GS Y VLL R M V KE +H+
Sbjct: 23 DLLR----VIGRGS----YAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 73
Query: 301 TRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
S +HP L+ L + + + V ++V G L + H++R P + R
Sbjct: 74 FEQAS-NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLP--EEHARFYSA 128
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA- 419
+ ++ L YL++ G+ + LK NVLLD+ LTDY + +
Sbjct: 129 E-ISLALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 183
Query: 420 ---YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476
Y +PE + + D W+LG+L+ E++ G+ P + + + + ++ V+
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 243
Query: 477 EE 478
E+
Sbjct: 244 EK 245
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H +L + N ++ + + + D+ + + K L V + +
Sbjct: 146 YLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 202 PE-SLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR 302
D+++F D L + LG G+FGS + V + + + ++ E M R
Sbjct: 326 KDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR 385
Query: 303 LGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIR-- 356
+ H P ++ LI + E +LV + G L L +R + P+
Sbjct: 386 EAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE------EIPVSNV 438
Query: 357 LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLH 416
+++ V+ G+ YL ++ H +L + NVLL N + ++D+ L + + +
Sbjct: 439 AELLHQVSMGMKYLEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
Query: 417 M-------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE + ++DVWS G+ + E L+
Sbjct: 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKL-------LVSDFVPNGSLANLLHVRRAPGQ 348
F +L+HP + +A Y E + +V ++V +L +++H
Sbjct: 59 FRREAQNAAALNHPAI---VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----- 110
Query: 349 PGLDWPIR-LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407
G P R +++I + L + ++ G+ H +K +N+++ + D+ +
Sbjct: 111 -GPMTPKRAIEVIADACQALNFSHQN--GII--HRDVKPANIMISATNAVKVMDFGIARA 165
Query: 408 -------VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
V + A + Y SPE + D V ++DV+SLG ++ E+LTG+ P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 23/206 (11%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR-------LGSLSHPNLLP 313
+G G++G +KA L V R G+E R L + HPN++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 314 L-----IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLA 368
L ++ R+ + LV + V + L L + P +PG+ ++ + +GL
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLD--KVP-EPGVPTETIKDMMFQLLRGLD 134
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEF 425
+L+ + H LK N+L+ ++ + L D+ L I + + A +V Y++PE
Sbjct: 135 FLHSH----RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEV 190
Query: 426 NQTDGVTRKTDVWSLGILILELLTGK 451
D+WS+G + E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H L + N ++ + + + D+ + + K L V + +
Sbjct: 142 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 198 PE-SLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 170 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 275
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + DY L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 29/210 (13%)
Query: 258 AEVLGSGSFGS-SYKAVLLTGPAMVVK-----RFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
+ LG G+FG LTG + VK + R + VGK + L HP++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHI 73
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
+ L + +V ++V G L + + H R + ++ + + + Y
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-------RLFQQILSAVDY 126
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTD 429
++ + H LK NVLLD + D+ L +++ + + SP + +
Sbjct: 127 CHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRTSCGSPNYAAPE 180
Query: 430 GVTRK------TDVWSLGILILELLTGKFP 453
++ + D+WS G+++ LL G P
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 16 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 126
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 127 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 182
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H +L + N ++ + + + D+ + + K L V + +
Sbjct: 145 YLNAK----KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 201 PE-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH-------EHMTRLGSLSHPNLLP 313
+G G++G+ YKA V + ++ N G+E + RL + HPN++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 314 L--IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
L + R + ++ V+ + ++ +AP PGL +++ +GL +L+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLH 129
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQT 428
+ H LK N+L+ + L D+ L I + + A +V Y++PE
Sbjct: 130 AN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Query: 429 DGVTRKTDVWSLGILILELLTGK--FPANYLAQGKGANADL 467
D+WS+G + E+ K F N A G DL
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 138
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-YKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E A Y++PE +NQ
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 199 T------VDIWSVGCIMAELLTGRTLFP 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 53/217 (24%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A+ +G + +K+ + S + + + + L + H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 318 YYRKEEKLLVSDFVPNGSLANL--LHVRRAPGQPGLDWPIRLK--------IIKGVAKGL 367
F P SL N ++ Q L + LK ++ + KGL
Sbjct: 92 ------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAY------K 421
Y++ GV H LK N+ ++ E + D+ L HA M Y +
Sbjct: 140 KYIHS--AGVV--HRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWYR 190
Query: 422 SPE-------FNQTDGVTRKTDVWSLGILILELLTGK 451
+PE +NQT D+WS+G ++ E+LTGK
Sbjct: 191 APEVILSWMHYNQT------VDIWSVGCIMAEMLTGK 221
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 28/218 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHE 298
DR++ L D + LGSG+FG+ K + + + N K++
Sbjct: 366 DRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 419
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ L +P ++ +I E +LV + G L L R + ++
Sbjct: 420 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IE 473
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQ 414
++ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 474 LVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 415 LH---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 37/173 (21%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL 357
E + R G HPN++ L Y + +V++ + G L LD +R
Sbjct: 67 EILLRYGQ--HPNIITLKDVYDDGKYVYVVTELMKGGEL--------------LDKILRQ 110
Query: 358 K---------IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVL-LDNAYEP---LLTDYAL 404
K ++ + K + YL+ + GV H LK SN+L +D + P + D+
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQ--GVV--HRDLKPSNILYVDESGNPESIRICDFGF 166
Query: 405 VPIVNKEHAQLHMVAYKS----PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ E+ L Y + PE + G D+WSLG+L+ +LTG P
Sbjct: 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 121
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQ-MSNVGKEDFHEHMTRLGSLSHPNLLPL-- 314
E LG+G FG + + TG + +K+ RQ +S +E + + + L+HPN++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 315 ----IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGL-DWPIRLKIIKGVAKGLAY 369
+ + LL ++ G L L+ + GL + PIR ++ ++ L Y
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN--QFENCCGLKEGPIR-TLLSDISSALRY 137
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMVA---YKSP 423
L++ + H LK N++L + L+ D +++ V Y +P
Sbjct: 138 LHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTGKFP 453
E + T D WS G L E +TG P
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQ-MSNVGKEDFHEHMTRLGSLSHPNLLPL-- 314
E LG+G FG + + TG + +K+ RQ +S +E + + + L+HPN++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 315 ----IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGL-DWPIRLKIIKGVAKGLAY 369
+ + LL ++ G L L+ + GL + PIR ++ ++ L Y
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN--QFENCCGLKEGPIR-TLLSDISSALRY 136
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMVA---YKSP 423
L++ + H LK N++L + L+ D +++ V Y +P
Sbjct: 137 LHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTGKFP 453
E + T D WS G L E +TG P
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 252 DLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKE-----------DFHEHM 300
DLLR V+G GS Y VLL R M V KE +H+
Sbjct: 55 DLLR----VIGRGS----YAKVLLVR-LKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHV 105
Query: 301 TRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
S +HP L+ L + + + V ++V G L + H++R P + R
Sbjct: 106 FEQAS-NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLP--EEHARFYSA 160
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA- 419
+ ++ L YL++ G+ + LK NVLLD+ LTDY + +
Sbjct: 161 E-ISLALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 215
Query: 420 ---YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476
Y +PE + + D W+LG+L+ E++ G+ P + + + + ++ V+
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275
Query: 477 EE 478
E+
Sbjct: 276 EK 277
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 155 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 260
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 28/218 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----KEDFHE 298
DR++ L D + LGSG+FG+ K + + + N K++
Sbjct: 367 DRKLLTLED------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA 420
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ L +P ++ +I E +LV + G L L R + ++
Sbjct: 421 EANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IE 474
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV----NKEHAQ 414
++ V+ G+ YL + H L + NVLL + ++D+ L + N AQ
Sbjct: 475 LVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 415 LH---MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
H V + +PE + K+DVWS G+L+ E +
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 31/231 (13%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAV---LLTGPAMVVKRFRQMSNVGKEDFHEH 299
N++ F N+L + LG+G+FG +A L A++ + + + D E
Sbjct: 38 NEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 300 -MTRLGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRR---------A 345
M+ L +SH N++ L+ L+++++ G L N L + A
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 346 PGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV 405
L L VA+G+A+L + H + + NVLL N + + D+ L
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 406 -PIVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
I+N K +A+L V + +PE T ++DVWS GIL+ E+ +
Sbjct: 212 RDIMNDSNYIVKGNARLP-VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H L + N ++ + + + D+ + + K L V + +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 201 PE-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H L + N ++ + + + D+ + + K L V + +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 201 PE-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
HPN++ L Y LV D + G L + L + + KI++ + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRALLEVI 137
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN---KEHAQLHMVAYKSPE 424
L+K + + H LK N+LLD+ LTD+ ++ K + +Y +PE
Sbjct: 138 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 425 FNQTD------GVTRKTDVWSLGILILELLTGKFP 453
+ G ++ D+WS G+++ LL G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 156 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 261
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
H+++L +HPN++P A + E +V+ F+ GS +L+ G L
Sbjct: 78 HVSKL--FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY--- 132
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD---NAY-EPLLTDYALVPIVNKEHA- 413
I++GV K L Y++ + H +K+S++L+ Y L ++ +++ ++
Sbjct: 133 ILQGVLKALDYIHH----MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 188
Query: 414 ------QLHMVAYKSPEFNQTD--GVTRKTDVWSLGILILELLTGKFP 453
+ ++ + SPE Q + G K+D++S+GI EL G P
Sbjct: 189 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
H+++L +HPN++P A + E +V+ F+ GS +L+ G L
Sbjct: 62 HVSKL--FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY--- 116
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD---NAY-EPLLTDYALVPIVNKEHA- 413
I++GV K L Y++ + H +K+S++L+ Y L ++ +++ ++
Sbjct: 117 ILQGVLKALDYIHH----MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV 172
Query: 414 ------QLHMVAYKSPEFNQTD--GVTRKTDVWSLGILILELLTGKFP 453
+ ++ + SPE Q + G K+D++S+GI EL G P
Sbjct: 173 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H L + N ++ + + + D+ + + K L V + +
Sbjct: 144 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 200 PE-SLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 296 FHEHMTRLGSLSHPNLLPLIAFYYRKEEKL-------LVSDFVPNGSLANLLHVRRAPGQ 348
F +L+HP + +A Y E + +V ++V +L +++H
Sbjct: 76 FRREAQNAAALNHPAI---VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----- 127
Query: 349 PGLDWPIR-LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407
G P R +++I + L + ++ G+ H +K +N+++ + D+ +
Sbjct: 128 -GPMTPKRAIEVIADACQALNFSHQN--GII--HRDVKPANIMISATNAVKVMDFGIARA 182
Query: 408 -------VNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
V + A + Y SPE + D V ++DV+SLG ++ E+LTG+ P
Sbjct: 183 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 155 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 260
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 172 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 277
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 196 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 301
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 121
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 86/220 (39%), Gaps = 34/220 (15%)
Query: 261 LGSGSFGSSYKAVLLT-GPA-----MVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
LG G+FG + A P + VK + + ++DF L +L H +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHV-------------RRAPGQPGLDWPIRLKIIK 361
+ ++V +++ +G L L R+A G+ GL L I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ--MLHIAS 140
Query: 362 GVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-------HAQ 414
+A G+ YL + H L + N L+ + D+ + V H
Sbjct: 141 QIASGMVYLASQH----FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFP 453
L + + PE T ++DVWS G+++ E+ T GK P
Sbjct: 197 LP-IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 173 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 278
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
HPN++ L Y LV D + G L + L + + KI++ + + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRALLEVI 124
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN---KEHAQLHMVAYKSPE 424
L+K + + H LK N+LLD+ LTD+ ++ K +Y +PE
Sbjct: 125 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 425 FNQTD------GVTRKTDVWSLGILILELLTGKFP 453
+ G ++ D+WS G+++ LL G P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 243 NDREMFELNDLLRASAEVLGSGSFGSSYKAV---LLTGPAMVVKRFRQMSNVGKEDFHEH 299
N++ F N+L + LG+G+FG +A L A++ + + + D E
Sbjct: 38 NEKWEFPRNNL--QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 300 -MTRLGSLSH----PNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWP 354
M+ L +SH N++ L+ L+++++ G L N L + + +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 355 IR---------LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV 405
I L VA+G+A+L + H + + NVLL N + + D+ L
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 406 -PIVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
I+N K +A+L V + +PE T ++DVWS GIL+ E+ +
Sbjct: 212 RDIMNDSNYIVKGNARLP-VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H L + N ++ + + + D+ + + K L V + +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 201 PE-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 156 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 261
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSYKAV---LLTGPA---MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y+ ++ G A + VK + +++ + +F + + + +++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLA 368
L+ + + L+V + + +G L + L R PG+P +++ +A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL + H L + N ++ + + + D+ + + K L V + +
Sbjct: 145 YLNAK----KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +D+WS G+++ E+ +
Sbjct: 201 PE-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 162 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 267
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 147 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 252
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 252 DLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKE-----------DFHEHM 300
DLLR V+G GS Y VLL R M V KE +H+
Sbjct: 12 DLLR----VIGRGS----YAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 62
Query: 301 TRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
S +HP L+ L + + + V ++V G L + H++R P + R
Sbjct: 63 FEQAS-NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLP--EEHARFYSA 117
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA- 419
+ ++ L YL++ G+ + LK NVLLD+ LTDY + +
Sbjct: 118 E-ISLALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 172
Query: 420 ---YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476
Y +PE + + D W+LG+L+ E++ G+ P + + + + ++ V+
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 232
Query: 477 EE 478
E+
Sbjct: 233 EK 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 34/242 (14%)
Query: 252 DLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKE-----------DFHEHM 300
DLLR V+G GS Y VLL R M V KE +H+
Sbjct: 8 DLLR----VIGRGS----YAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV 58
Query: 301 TRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKII 360
S +HP L+ L + + + V ++V G L + H++R P + R
Sbjct: 59 FEQAS-NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLP--EEHARFYSA 113
Query: 361 KGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA- 419
+ ++ L YL++ G+ + LK NVLLD+ LTDY + +
Sbjct: 114 E-ISLALNYLHER--GII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 168
Query: 420 ---YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476
Y +PE + + D W+LG+L+ E++ G+ P + + + + ++ V+
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 228
Query: 477 EE 478
E+
Sbjct: 229 EK 230
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 14 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 124
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 125 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 180
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 121
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 121
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL 177
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 25/207 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
++LG G+FG K +L+ TG +K R+ + K++ +T L + HP L
Sbjct: 11 KLLGKGTFG---KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-VAKGLAYL 370
L + + V ++ G L L R + R + + L YL
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE------RARFYGAEIVSALEYL 121
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFN 426
+ + + +K N++LD +TD+ L + A + Y +PE
Sbjct: 122 HSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL 177
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ + R D W LG+++ E++ G+ P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 182 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 287
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 116/250 (46%), Gaps = 29/250 (11%)
Query: 219 EIQSSDCYFVNSQNDEISKLHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAV-LLTG 277
++ + + YF ++ + E + ++ ++E+ + + + V GSG++GS A TG
Sbjct: 12 DLGTENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAFDTKTG 70
Query: 278 PAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY--RKEEKLLVSDFVPN 333
+ VK+ + S + + + + L + H N++ L+ + R E+ V +
Sbjct: 71 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 130
Query: 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN 393
A+L ++ + Q D ++ +I + +GL Y++ + H LK SN+ ++
Sbjct: 131 LMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH----SADIIHRDLKPSNLAVNE 183
Query: 394 AYEPLLTDYALVPIVNKE-HAQLHMVAYKSPE-------FNQTDGVTRKTDVWSLGILIL 445
E + D+ L + E + Y++PE +NQT D+WS+G ++
Sbjct: 184 DCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQT------VDIWSVGCIMA 237
Query: 446 ELLTGK--FP 453
ELLTG+ FP
Sbjct: 238 ELLTGRTLFP 247
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
L+ +F+P+GSL L + ++ +LK + KG+ YL H L
Sbjct: 90 LIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGSR----QYVHRDLA 141
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVL+++ ++ + D+ L + + + V + +PE +DVW
Sbjct: 142 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 201
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 202 SFGVTLHELLT 212
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 162
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-HAQLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 223 T------VDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH-------EHMTRLGSLSHPNLLP 313
+G G++G+ YKA V + ++ N G+E + RL + HPN++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 314 L--IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
L + R + ++ V+ + ++ +AP PGL +++ +GL +L+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLH 129
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQT 428
+ H LK N+L+ + L D+ L I + + A +V Y++PE
Sbjct: 130 AN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 429 DGVTRKTDVWSLGILILELLTGK--FPANYLAQGKGANADL 467
D+WS+G + E+ K F N A G DL
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHE-HMTRLGSLSHPNLLPL 314
A E +G G +G ++ L G ++ VK F S + F E + L H N+L
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFS--SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 315 IAFYYRKE----EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
IA + L++ + +GSL + L +R +P L L++ A GLA+L
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL--QRQTLEPHLA----LRLAVSAACGLAHL 121
Query: 371 YKEFPGV----TLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK--------EHAQLHMV 418
+ E G + H KS NVL+ + + + D L + ++ + ++
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 419 AYKSPEF----NQTDGVT--RKTDVWSLGILILEL 447
Y +PE +TD + TD+W+ G+++ E+
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
HPN++ L Y LV D + G L + L + + KI++ + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-----KIMRALLEVI 137
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN---KEHAQLHMVAYKSPE 424
L+K + + H LK N+LLD+ LTD+ ++ K +Y +PE
Sbjct: 138 CALHK----LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 425 FNQTD------GVTRKTDVWSLGILILELLTGKFP 453
+ G ++ D+WS G+++ LL G P
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 147
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 208 T------VDIWSVGCIMAELLTGRTLFP 229
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 153
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 214 T------VDIWSVGCIMAELLTGRTLFPGT 237
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 29/210 (13%)
Query: 258 AEVLGSGSFGS-SYKAVLLTGPAMVVK-----RFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
+ LG G+FG LTG + VK + R + VGK + L HP++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHI 73
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
+ L + +V ++V G L + + H R + ++ + + + Y
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-------RLFQQILSAVDY 126
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTD 429
++ + H LK NVLLD + D+ L +++ + + SP + +
Sbjct: 127 CHRHM----VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRDSCGSPNYAAPE 180
Query: 430 GVTRK------TDVWSLGILILELLTGKFP 453
++ + D+WS G+++ LL G P
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
L+ +F+P+GSL L + ++ +LK + KG+ YL H L
Sbjct: 102 LIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGSR----QYVHRDLA 153
Query: 386 SSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-------VAYKSPEFNQTDGVTRKTDVW 438
+ NVL+++ ++ + D+ L + + + V + +PE +DVW
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 439 SLGILILELLT 449
S G+ + ELLT
Sbjct: 214 SFGVTLHELLT 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 154
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 215 T------VDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 152
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 213 T------VDIWSVGCIMAELLTGRTLFP 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 154
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 215 T------VDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 154
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 215 T------VDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 153
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 214 T------VDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 147
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 208 T------VDIWSVGCIMAELLTGRTLFP 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 144
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 205 T------VDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 161
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 222 T------VDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ ++ Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKS--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 39/213 (18%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
E +G GS+ + + T VK + E+ E + R G HPN++ L
Sbjct: 28 EDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEI-EILLRYGQ--HPNIITLKDV 84
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK---------IIKGVAKGLA 368
Y + +V++ G L LD +R K ++ + K +
Sbjct: 85 YDDGKYVYVVTELXKGGEL--------------LDKILRQKFFSEREASAVLFTITKTVE 130
Query: 369 YLYKEFPGVTLPHGHLKSSNVL-LDNAYEP---LLTDYALVPIVNKEHAQLHMVAYKS-- 422
YL+ + GV H LK SN+L +D + P + D+ + E+ L Y +
Sbjct: 131 YLHAQ--GVV--HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANF 186
Query: 423 --PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + G D+WSLG+L+ LTG P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 162
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 223 T------VDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 32/234 (13%)
Query: 261 LGSGSFGSSYKAVLLTGP------AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG G+FG Y+ + P + VK ++ + E DF + +H N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLH-VRRAPGQPG----LDWPIRLKIIKGVAKGLA 368
I + + ++ + + G L + L R P QP LD L + + +A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIV------NKEHAQLHMVA 419
YL + H + + N LL + D+ + + K + V
Sbjct: 170 YLEENH----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 420 YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473
+ PE T KTD WS G+L+ E+ F Y+ +N ++ +V S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI----FSLGYMPYPSKSNQEVLEFVTS 275
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 148
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 209 T------VDIWSVGCIMAELLTGRTLFP 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 147
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 208 T------VDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 141
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 202 T------VDIWSVGCIMAELLTGRTLFPGT 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 149
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 210 T------VDIWSVGCIMAELLTGRTLFPGT 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 148
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 209 T------VDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 144
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 205 T------VDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAY 369
+ L + +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIVL 152
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQT 428
++ + L + LK N+L+D +TD+ V L Y +PE +
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
G + D W+LG+LI E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 162
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 223 T------VDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 144
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 205 T------VDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
HP+++ LI Y LV D + G L + L + A + I++ + + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-----SIMRSLLEAV 213
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPE 424
++L+ + H LK N+LLD+ + L+D+ + + Y +PE
Sbjct: 214 SFLHAN----NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 425 FNQTD------GVTRKTDVWSLGILILELLTGKFP 453
+ G ++ D+W+ G+++ LL G P
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 140
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 201 T------VDIWSVGCIMAELLTGRTLFPGT 224
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFH-------EHMTRLGSLSHPNLLP 313
+G G++G+ YKA V + ++ N G+E + RL + HPN++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 314 L--IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
L + R + ++ V+ + ++ +AP PGL +++ +GL +L+
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLH 129
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQT 428
+ H LK N+L+ + L D+ L I + + A +V Y++PE
Sbjct: 130 AN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Query: 429 DGVTRKTDVWSLGILILELLTGK--FPANYLAQGKGANADL 467
D+WS+G + E+ K F N A G DL
Sbjct: 186 STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 144
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 205 T------VDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAY 369
+ L + +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIVL 152
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQT 428
++ + L + LK N+L+D +TD+ V L Y +PE +
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
G + D W+LG+LI E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 24/205 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAY 369
+ L + +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIVL 152
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQT 428
++ + L + LK N+L+D +TD+ V L Y +PE +
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
G + D W+LG+LI E+ G P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 161
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 222 T------VDIWSVGCIMAELLTGRTLFPGT 245
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 31/233 (13%)
Query: 236 SKLHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNV 291
+KL V DR + L ++LG G FGS + L T + VK + + N
Sbjct: 24 NKLEDVVIDRNLLIL-------GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK-LDNS 75
Query: 292 GKEDFHEHMTRLGSL---SHPNLLPLIAFYYRKEEK-----LLVSDFVPNGSLAN-LLHV 342
+ + E ++ + SHPN++ L+ + +++ F+ G L LL+
Sbjct: 76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS 135
Query: 343 RRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402
R G + LK + +A G+ YL H L + N +L + + D+
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYLSNR----NFLHRDLAARNCMLRDDMTVCVADF 191
Query: 403 ALVP-IVNKEHAQLHMVAYKSPEFNQTDGV-----TRKTDVWSLGILILELLT 449
L I + ++ + +A ++ + + T K+DVW+ G+ + E+ T
Sbjct: 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 138
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 199 T------VDIWSVGCIMAELLTGRTLFP 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 165
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 226 T------VDIWSVGCIMAELLTGRTLFPGT 249
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 148
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 209 T------VDIWSVGCIMAELLTGRTLFPGT 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 139
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 200 T------VDIWSVGCIMAELLTGRTLFPGT 223
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 24/206 (11%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+ +G G+F A +LTG + +K Q++ + + + L+HPN++ L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLL--HVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
++ L+ ++ G + + L H R + + + + + Y +++
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-------RQIVSAVQYCHQK 130
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL---VPIVNKEHAQLHMVAYKSPEFNQ--- 427
+ H LK+ N+LLD + D+ + K Y +PE Q
Sbjct: 131 ----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
DG + DVWSLG+++ L++G P
Sbjct: 187 YDGP--EVDVWSLGVILYTLVSGSLP 210
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 40 KTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 96
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 97 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 204
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 55/218 (25%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A+ +G + +K+ + S + + + + L + H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 318 YYRKEEKLLVSDFVPNGSLANLLH-----------VRRAPGQPGLDWPIRLKIIKGVAKG 366
F P SL N +++ G + I+ ++ + KG
Sbjct: 110 ------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-LVYQMLKG 156
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAY------ 420
L Y++ GV H LK N+ ++ E + D+ L HA M Y
Sbjct: 157 LKYIHSA--GVV--HRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWY 207
Query: 421 KSPE-------FNQTDGVTRKTDVWSLGILILELLTGK 451
++PE +NQT D+WS+G ++ E+LTGK
Sbjct: 208 RAPEVILSWMHYNQT------VDIWSVGCIMAEMLTGK 239
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 139
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 200 T------VDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 46/217 (21%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK-----------IIKGVAKG 366
F P SL V G D +K +I + +G
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE- 424
L Y++ + H LK SN+ ++ E + D+ L + E + Y++PE
Sbjct: 138 LKYIH----SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 425 ------FNQTDGVTRKTDVWSLGILILELLTGK--FP 453
+NQT D+WS+G ++ ELLTG+ FP
Sbjct: 194 MLNWMHYNQT------VDIWSVGCIMAELLTGRTLFP 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 48 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIL 212
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 75
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 76 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 130
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 131 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWC 185
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 147
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 208 T------VDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM 417
KI + K L +L+ + +++ H +K SNVL++ + D+ + + + A+
Sbjct: 140 KIAVSIVKALEHLHSK---LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 418 VAYK--------SPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
K +PE NQ G + K+D+WSLGI +EL +FP
Sbjct: 197 AGCKPYXAPERINPELNQK-GYSVKSDIWSLGITXIELAILRFP 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 138
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 199 T------VDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 48 KTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 147 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 203 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 48 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 48 KTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 48 KTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 260 VLGSGSFGSSYKAV-LLTGPAMVVKRFR----QMSNVGKEDF------HEHMTRLGS--L 306
VLG G+FG KA L +K+ R ++S + E H+++ R + L
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 307 SHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKG 366
N + + +K + ++ NG+L +L+H Q W ++ + + +
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILEA 128
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM--------- 417
L+Y++ + G+ H LK N+ +D + + D+ L V++ L +
Sbjct: 129 LSYIHSQ--GII--HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 418 ---------VAYKSPE-FNQTDGVTRKTDVWSLGILILELL----TGKFPANYLAQGKGA 463
Y + E + T K D++SLGI+ E++ TG N L + +
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSV 244
Query: 464 NADL 467
+ +
Sbjct: 245 SIEF 248
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 21/114 (18%)
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHM 417
++ + +GL Y++ + H LK SNV ++ E + D+ L ++E +
Sbjct: 128 LVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVAT 183
Query: 418 VAYKSPE-------FNQTDGVTRKTDVWSLGILILELLTGK--FP-ANYLAQGK 461
Y++PE +NQT D+WS+G ++ ELL GK FP ++Y+ Q K
Sbjct: 184 RWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGKALFPGSDYIDQLK 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 46/217 (21%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK-----------IIKGVAKG 366
F P SL V G D +K +I + +G
Sbjct: 90 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE- 424
L Y++ + H LK SN+ ++ E + D+ L + E + Y++PE
Sbjct: 138 LKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 425 ------FNQTDGVTRKTDVWSLGILILELLTGK--FP 453
+NQT D+WS+G ++ ELLTG+ FP
Sbjct: 194 MLNWMHYNQT------VDIWSVGCIMAELLTGRTLFP 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 36/221 (16%)
Query: 261 LGSGSFGSSYKA----VLLTGP--AMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
+G G+FG ++A +L P + VK ++ ++ + DF + +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRR-------------------APGQPGLDWP 354
L+ + L+ +++ G L L +PG P L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 355 IRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-IVNKEHA 413
+L I + VA G+AYL + H L + N L+ + D+ L I + ++
Sbjct: 175 EQLCIARQVAAGMAYLSER----KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 414 QLH-----MVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + + PE + T ++DVW+ G+++ E+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 21/114 (18%)
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHM 417
++ + +GL Y++ + H LK SNV ++ E + D+ L ++E +
Sbjct: 136 LVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVAT 191
Query: 418 VAYKSPE-------FNQTDGVTRKTDVWSLGILILELLTGK--FP-ANYLAQGK 461
Y++PE +NQT D+WS+G ++ ELL GK FP ++Y+ Q K
Sbjct: 192 RWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEH-MTRLGSLSHPNLLPLIA 316
E LG+G+F A TG VK + + GKE E+ + L + H N++ L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
Y LV V G L + + + + +I+ V + YL++
Sbjct: 88 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS-----TLIRQVLDAVYYLHR---- 138
Query: 377 VTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDG 430
+ + H LK N+L D + +++D+ L + K Y +PE
Sbjct: 139 MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 431 VTRKTDVWSLGILILELLTGKFPANY 456
++ D WS+G++ LL G +P Y
Sbjct: 199 YSKAVDCWSIGVIAYILLCG-YPPFY 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 33 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 89
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 90 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 137
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIIL 197
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 148
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L + E + Y++PE +NQ
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 209 T------VDIWSVGCIMAELLTGRTLFP 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 21/114 (18%)
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHM 417
++ + +GL Y++ + H LK SNV ++ E + D+ L ++E +
Sbjct: 136 LVYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVAT 191
Query: 418 VAYKSPE-------FNQTDGVTRKTDVWSLGILILELLTGK--FP-ANYLAQGK 461
Y++PE +NQT D+WS+G ++ ELL GK FP ++Y+ Q K
Sbjct: 192 RWYRAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGKALFPGSDYIDQLK 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 46/217 (21%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK-----------IIKGVAKG 366
F P SL V G D +K +I + +G
Sbjct: 86 ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE- 424
L Y++ + H LK SN+ ++ E + D+ L + E + Y++PE
Sbjct: 134 LKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 425 ------FNQTDGVTRKTDVWSLGILILELLTGK--FP 453
+NQT D+WS+G ++ ELLTG+ FP
Sbjct: 190 MLNWMHYNQT------VDIWSVGCIMAELLTGRTLFP 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HPNLLP 313
++LG GSFG + A T +K ++ + +D M LS HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
+ + KE V +++ G L + H++ D + GL +L+ +
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHK---FDLSRATFYAAEIILGLQFLHSK 137
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTD 429
G+ + LK N+LLD + D+ + A+ + Y +PE
Sbjct: 138 --GIV--YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
D WS G+L+ E+L G+ P
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 40 KTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 96
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 97 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH---------ARFYAAQIV 144
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 204
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 81
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 82 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 136
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 137 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWC 191
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 48 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH---------ARFYAAQIV 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 212
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 144 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 200 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 147 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 203 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFXEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 68 KTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 124
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 125 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 172
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 232
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 75
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 76 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 130
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 131 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWC 185
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V ++ + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+++D +TD+ L V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 81
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 82 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 136
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 137 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF-AWC 191
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 138 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 194 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 140 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 196 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 71
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 126
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP--------IVNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 127 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF-AWC 181
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 71
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 126
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 127 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWC 181
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 29/208 (13%)
Query: 259 EVLGSGSFG---------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
E LG GSFG S K V + + Q + +DF + + SL H
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM--DDFIREVNAMHSLDHR 71
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
NL+ L K+ V++ P GSL + L R+ G L R + VA+G+ Y
Sbjct: 72 NLIRLYGVVLTPPMKM-VTELAPLGSLLDRL--RKHQGHFLLGTLSRYAV--QVAEGMGY 126
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI--------VNKEHAQLHMVAYK 421
L + H L + N+LL + D+ L+ V +EH ++ A+
Sbjct: 127 LESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF-AWC 181
Query: 422 SPEFNQTDGVTRKTDVWSLGILILELLT 449
+PE +T + +D W G+ + E+ T
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMVVKRFRQM------SNVGKEDFHEHMTRLGSLSHPNLLP 313
+LG G FGS +A L VK +M ++ E+F + HP++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 314 LIAFYYRKEEK------LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIR--LKIIKGVAK 365
L+ R K +++ F+ +G L L R G+ + P++ ++ + +A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI-GENPFNLPLQTLVRFMVDIAC 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSP-- 423
G+ YL H L + N +L + D+ L + A K P
Sbjct: 149 GMEYLSSR----NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVK 204
Query: 424 ----EFNQTDGVTRKTDVWSLGILILELLT-GKFP 453
E + T +DVW+ G+ + E++T G+ P
Sbjct: 205 WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 146 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 202 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V ++ + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+++D +TD+ L V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R P L P K+I+ +A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 143 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 199 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 146 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 202 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 149
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L E + Y++PE +NQ
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 210 T------VDIWSVGCIMAELLTGRTLFP 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 149
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L E + Y++PE +NQ
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 210 T------VDIWSVGCIMAELLTGRTLFP 231
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
Query: 300 MTRLGSLSHPNLLPL--IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL 357
+ RL + HPN++ L + R + ++ V+ + ++ +AP PGL
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP-PPGLPAETIK 123
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM 417
+++ +GL +L+ + H LK N+L+ + L D+ L I + + A +
Sbjct: 124 DLMRQFLRGLDFLHAN----CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPV 179
Query: 418 VA---YKSPEFNQTDGVTRKTDVWSLGILILELLTGK--FPANYLAQGKGANADL 467
V Y++PE D+WS+G + E+ K F N A G DL
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 234
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 153 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 209 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 250 LNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRF-RQMSNVGKEDFHEHMTRLGSLS 307
D+ + +VLG G+ + L+T VK +Q ++ F E
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L LI F+ ++ LV + + GS+ + +H RR + L+ + +++ VA L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE--LEASV---VVQDVASAL 124
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYE----------------------PLLTDYALV 405
+L+ + + H LK N+L ++ + P+ T L
Sbjct: 125 DFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 406 PIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
P + E+ +V S E + D ++ D+WSLG+++ LL+G P
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYD---KRCDLWSLGVILYILLSGYPP 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 259 EVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HPNLLP 313
++LG GSFG + A T +K ++ + +D M LS HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
+ + KE V +++ G L + H++ D + GL +L+ +
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHK---FDLSRATFYAAEIILGLQFLHSK 138
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA----YKSPEFNQTD 429
G+ + LK N+LLD + D+ + A+ + Y +PE
Sbjct: 139 --GIV--YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 430 GVTRKTDVWSLGILILELLTGKFP 453
D WS G+L+ E+L G+ P
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 250 LNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRF-RQMSNVGKEDFHEHMTRLGSLS 307
D+ + +VLG G+ + L+T VK +Q ++ F E
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 308 HPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGL 367
H N+L LI F+ ++ LV + + GS+ + +H RR + L+ + +++ VA L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNE--LEASV---VVQDVASAL 124
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYE----------------------PLLTDYALV 405
+L+ + + H LK N+L ++ + P+ T L
Sbjct: 125 DFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 406 PIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
P + E+ +V S E + D ++ D+WSLG+++ LL+G P
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYD---KRCDLWSLGVILYILLSGYPP 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 149
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D+ L E + Y++PE +NQ
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 210 T------VDIWSVGCIMAELLTGRTLFP 231
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R P L P K+I+ +A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 153 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 208
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 209 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N ++ + + D+ + + K L V + S
Sbjct: 175 YLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 230
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 231 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAV-LLTG---PAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
E LG G+F + V +L G AM++ +++S + L HPN++ L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINT-KKLSARDHQKLEREARICRLLKHPNIVRL 75
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ L+ D V G L + R + I+ +I++ V L+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAV------LHCHQ 128
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQ 427
GV H +LK N+LL + + L D+ L V E A Y SPE +
Sbjct: 129 MGVV--HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
D + D+W+ G+++ LL G P
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PAM V K + S+ +E F +
Sbjct: 8 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLIL 115
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 116 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PAM V K + S+ +E F +
Sbjct: 8 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 115
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 116 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PAM V K + S+ +E F +
Sbjct: 8 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLIL 115
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ L D+ L + K
Sbjct: 116 YAYQLSTALAYLESK----RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 19/198 (9%)
Query: 261 LGSGSFGSSYKAVLLT--GPAMVV--KRFRQ-MSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+G G FG ++ + ++ PAM V K + S+ +E F + + HP+++ LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ ++ + G L + L VR+ LD + ++ LAYL +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESK-- 510
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHAQLHMVAYKSPEFNQTDG 430
H + + NVL+ L D+ L + K + + +PE
Sbjct: 511 --RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 431 VTRKTDVWSLGILILELL 448
T +DVW G+ + E+L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 19/198 (9%)
Query: 261 LGSGSFGSSYKAVLLT--GPAMVV--KRFRQ-MSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
+G G FG ++ + ++ PAM V K + S+ +E F + + HP+++ LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ ++ + G L + L VR+ LD + ++ LAYL +
Sbjct: 458 GVI-TENPVWIIMELCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESK-- 510
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHAQLHMVAYKSPEFNQTDG 430
H + + NVL+ + L D+ L + K + + +PE
Sbjct: 511 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 431 VTRKTDVWSLGILILELL 448
T +DVW G+ + E+L
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FP 453
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFP 224
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V +M + +ED + ++ + + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN------KEHA 413
+A+G+ YL + H L + NVL+ + D+ L +N K
Sbjct: 163 TYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLI 315
+++LG G+ + ++ TG +K F +S + D L L+H N++ L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 316 AFYYRK--EEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
A K+L+ +F P GSL +L A G P ++ L +++ V G+ +L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF---LIVLRDVVGGMNHLRE 130
Query: 373 EFPGVTLPHGHLKSSNVLL----DNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQT 428
+ H ++K N++ D LTD+ + E + + Y + E+
Sbjct: 131 N----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL--EDDEQFVXLYGTEEYLHP 184
Query: 429 D----GVTRK---------TDVWSLGILILELLTGKFP 453
D V RK D+WS+G+ TG P
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 26/204 (12%)
Query: 259 EVLGSGSFGSSYKA-------VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
+ LG G F + YKA ++ + R + + E + L LSHPN+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE-IKLLQELSHPNI 74
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L+ + K LV DF+ L ++ P I+ ++ + +GL YL+
Sbjct: 75 IGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPS---HIKAYMLMTL-QGLEYLH 129
Query: 372 KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-PIVNKEHAQLHMVA---YKSPEF-- 425
+ + + H LK +N+LLD L D+ L + A H V Y++PE
Sbjct: 130 QHW----ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 426 -NQTDGVTRKTDVWSLGILILELL 448
+ GV D+W++G ++ ELL
Sbjct: 186 GARMYGVG--VDMWAVGCILAELL 207
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 81 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 138
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 194
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 195 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 141 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 194
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 290 NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQP 349
V K+ + L LSHPN++ L + E LV + V G L + + + +
Sbjct: 89 TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSER 148
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY--EPL-LTDYALVP 406
+K + + +AYL++ G+ H LK N+L PL + D+ L
Sbjct: 149 D-----AADAVKQILEAVAYLHEN--GIV--HRDLKPENLLYATPAPDAPLKIADFGLSK 199
Query: 407 IVNKEHAQLHMVA-----YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
IV EH L Y +PE + + D+WS+GI+ LL G P
Sbjct: 200 IV--EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL------VPIVNKEHA 413
VA+G+ YL + H L + NVL+ + D+ L + K
Sbjct: 156 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 84 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 141
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 142 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 197
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 198 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS----LSHPNLLPL 314
E LG G+F + V + + + D H+ + R L HPN++ L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 86
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ L+ D V G L + R + I+ +I++ V L+
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAV------LHCHQ 139
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQ 427
GV H LK N+LL + + L D+ L V E A Y SPE +
Sbjct: 140 MGVV--HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
D + D+W+ G+++ LL G P
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMRIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 41/218 (18%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
LG G++G YKA+ +T + +KR R + V E ++ L L H N++ L +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE-VSLLKELQHRNIIELKS 100
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+ L+ ++ N ++ + P + +++IK ++LY+ G
Sbjct: 101 VIHHNHRLHLIFEYAENDLKK---YMDKNPD-------VSMRVIK------SFLYQLING 144
Query: 377 VTLPHGH------LKSSNVLL---DNAYEPLLT--DYAL-----VPIVNKEHAQLHMVAY 420
V H LK N+LL D + P+L D+ L +PI H ++ + Y
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH-EIITLWY 203
Query: 421 KSPE-FNQTDGVTRKTDVWSLGILILELL--TGKFPAN 455
+ PE + + D+WS+ + E+L T FP +
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 148 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 201
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 145 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 198
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 79 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 136
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLTARNVLVTENNVMKIADFGLAR 192
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 193 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 156 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 209
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 156 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 209
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 261 LGSGSFGSSY----KAVLLTGPA--MVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLP 313
LG GSFG Y K V+ P + +K + +++ + +F + + + +++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQ--PGLDWPIRLKIIK---GVAKGLA 368
L+ + + L++ + + G L + L R + P L P K+I+ +A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV------NKEHAQLHMVAYKS 422
YL H L + N + + + D+ + + K L V + S
Sbjct: 140 YLNAN----KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 423 PEFNQTDGV-TRKTDVWSLGILILELLT 449
PE + DGV T +DVWS G+++ E+ T
Sbjct: 196 PE-SLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 149 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 202
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + D L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+++D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 2 NLMGMIDVDTL-SRLPGLRSLSFINNSFDGPMPSV--GKLTLRALYLSLNKFTGEIPSDA 58
N +G I D L RLP L L N G P+ G ++ L L NK EI +
Sbjct: 39 NELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK-EISNKM 97
Query: 59 FAGMDQLKKVHLARNHFSGQIPKS 82
F G+ QLK ++L N S +P S
Sbjct: 98 FLGLHQLKTLNLYDNQISCVMPGS 121
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L RR PG + L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL------VPIVNKEHA 413
VA+G+ YL + H L + NVL+ + D+ L + K
Sbjct: 197 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 261 LGSGSFGSSYKAVL-LTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++G+ AV TG + +K+ + S + + + + L + H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 318 YYRKEEKLLVSDF---VP-NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE 373
+ E +DF +P G+ L G+ + + ++ + KGL Y++
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-----LVYQMLKGLRYIH-- 145
Query: 374 FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-YKSPE--FNQTDG 430
+ H LK N+ ++ E + D+ L + E + Y++PE N
Sbjct: 146 --AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMR- 202
Query: 431 VTRKTDVWSLGILILELLTGK 451
T+ D+WS+G ++ E++TGK
Sbjct: 203 YTQTVDIWSVGCIMAEMITGK 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 118/326 (36%), Gaps = 59/326 (18%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHE 298
FV E+ EL +R VL G F Y+A + +G +KR +
Sbjct: 18 FVGQTVELGELRLRVR---RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ 74
Query: 299 HMTRLGSLS-HPNLLPLI-AFYYRKEEK-------LLVSDFVPNGSLANLLHVRRAPGQP 349
+ + LS HPN++ A KEE LL+++ G L L + G
Sbjct: 75 EVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPL 133
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV---- 405
D LKI + + +++++ P + H LK N+LL N L D+
Sbjct: 134 SCD--TVLKIFYQTCRAVQHMHRQKPPII--HRDLKVENLLLSNQGTIKLCDFGSATTIS 189
Query: 406 ------------PIVNKEHAQLHMVAYKSPEFNQTDG---VTRKTDVWSLGILILELLTG 450
+V +E + Y++PE + K D+W+LG ++ L
Sbjct: 190 HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFR 249
Query: 451 KFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCE 510
+ P GA + S+ + VF +R ML++
Sbjct: 250 QHPFE-----DGAKLRIVNGKYSIPPHDTQYTVFHSLIRA-------MLQV--------- 288
Query: 511 WNAERRWDLREAVEKIMELKERDNDN 536
N E R + E V ++ E+ N N
Sbjct: 289 -NPEERLSIAEVVHQLQEIAAARNVN 313
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS----LSHPNLLPL 314
E LG G+F + V T + + D H+ + R L HPN++ L
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 95
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ LV D V G L + R + I + + + ++++
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIHQILESVNHIHQH- 149
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQ 427
+ H LK N+LL + + L D+ L V E A Y SPE +
Sbjct: 150 ---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
D + D+W+ G+++ LL G P
Sbjct: 207 KDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PA+ V K + S+ +E F +
Sbjct: 11 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 64 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 118
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 119 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PA+ V K + S+ +E F +
Sbjct: 13 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 66 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 120
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 121 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVNK-------EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N + +L V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDYYKNTTNGRLP-VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 28/207 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPN 310
+ LG+GSFG V+L TG +K + V + + L +++ P
Sbjct: 47 KTLGTGSFGR----VMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 311 LLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGL 367
L+ L F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQI 150
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFN 426
++ + L + LK N+++D +TD+ V L Y +PE
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 210
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PA+ V K + S+ +E F +
Sbjct: 10 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 63 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 117
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 118 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 28/207 (13%)
Query: 259 EVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPN 310
+ LG+GSFG V+L TG +K + V + + L +++ P
Sbjct: 48 KTLGTGSFGR----VMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 311 LLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGL 367
L+ L F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQI 151
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFN 426
++ + L + LK N+++D +TD+ V L Y +PE
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEII 211
Query: 427 QTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PA+ V K + S+ +E F +
Sbjct: 5 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 57
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 58 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 112
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 113 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQ-MSNVGKEDFHE 298
RE EL +G G FG ++ + ++ PA+ V K + S+ +E F +
Sbjct: 36 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 89 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 143
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 144 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 260 VLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
VLG GSFG V+L T +K ++ + +D M L L P
Sbjct: 26 VLGKGSFGK----VMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYL 370
L + ++ ++L V ++V G L + H+++ G+ P + ++ GL +L
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQV-GK--FKEPQAVFYAAEISIGLFFL 136
Query: 371 YKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA--------YKS 422
+K G+ + LK NV+LD+ + D+ + KEH + Y +
Sbjct: 137 HKR--GII--YRDLKLDNVMLDSEGHIKIADFGMC----KEHMMDGVTTREFCGTPDYIA 188
Query: 423 PEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
PE + D W+ G+L+ E+L G+ P
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 28/210 (13%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS A TG + VK+ + S + + + + L + H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 318 YY--RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ R E+ V + A+L ++ + Q D ++ +I + +GL Y++
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQF-LIYQILRGLKYIH---- 142
Query: 376 GVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE-------FNQ 427
+ H LK SN+ ++ E + + L + E + Y++PE +NQ
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 428 TDGVTRKTDVWSLGILILELLTGK--FPAN 455
T D+WS+G ++ ELLTG+ FP
Sbjct: 203 T------VDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMV-AYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAVLLT--GPAMVV--KRFRQM-SNVGKEDFHE 298
RE EL +G G FG ++ + ++ PA+ V K + S+ +E F +
Sbjct: 8 QRERIEL-------GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 299 HMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ HP+++ LI + ++ + G L + L VR+ LD +
Sbjct: 61 EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL 115
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHA 413
++ LAYL + H + + NVL+ + L D+ L + K
Sbjct: 116 YAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ + +PE T +DVW G+ + E+L
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFAEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ ++ G+L L RR PG
Sbjct: 138 EMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 196 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 252 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+++D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ +G+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTIGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++VP G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D + D+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMV-AYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEH 299
R++++ D VLG+G+F V+L T + +K + + GKE E+
Sbjct: 17 RDIYDFRD-------VLGTGAFSE----VILAEDKRTQKLVAIKCIAKKALEGKEGSMEN 65
Query: 300 -MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLL-----HVRRAPGQPGLDW 353
+ L + HPN++ L Y L+ V G L + + + R
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------ 119
Query: 354 PIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVL---LDNAYEPLLTDYALVPIVNK 410
++I V + YL+ + + H LK N+L LD + +++D+ L + +
Sbjct: 120 ----RLIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 411 EHA---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANY 456
Y +PE ++ D WS+G++ LL G +P Y
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 101
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 102 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 149
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 209
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ LG+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V ++V G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLI 315
+++LG G+ + ++ TG +K F +S + D L L+H N++ L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 316 AFYYRK--EEKLLVSDFVPNGSLANLLH-VRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
A K+L+ +F P GSL +L A G P ++ L +++ V G+ +L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF---LIVLRDVVGGMNHLRE 130
Query: 373 EFPGVTLPHGHLKSSNVLL----DNAYEPLLTDYA----------LVPIVNKE---HAQL 415
G+ H ++K N++ D LTD+ V + E H +
Sbjct: 131 N--GIV--HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ A + + G T D+WS+G+ TG P
Sbjct: 187 YERAVLRKDHQKKYGAT--VDLWSIGVTFYHAATGSLP 222
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ + G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEH 299
R++++ D VLG+G+F V+L T + +K + + GKE E+
Sbjct: 17 RDIYDFRD-------VLGTGAFSE----VILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 300 -MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLL-----HVRRAPGQPGLDW 353
+ L + HPN++ L Y L+ V G L + + + R
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------ 119
Query: 354 PIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVL---LDNAYEPLLTDYALVPIVNK 410
++I V + YL+ + + H LK N+L LD + +++D+ L + +
Sbjct: 120 ----RLIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 411 EHA---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANY 456
Y +PE ++ D WS+G++ LL G +P Y
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL--L 312
+ LG+GSFG + +L+ TG +K + V + + L N L
Sbjct: 48 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 313 PLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAY 369
+ F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIVL 153
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQT 428
++ + L + LK N+++D +TD+ V L Y +PE +
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
G + D W+LG+LI E+ G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEH 299
R++++ D VLG+G+F V+L T + +K + + GKE E+
Sbjct: 17 RDIYDFRD-------VLGTGAFSE----VILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 300 -MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK 358
+ L + HPN++ L Y L+ V G L + + + + +
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----R 120
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVL---LDNAYEPLLTDYALVPIVNKEHA-- 413
+I V + YL+ + + H LK N+L LD + +++D+ L + +
Sbjct: 121 LIFQVLDAVKYLHD----LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 414 -QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANY 456
Y +PE ++ D WS+G++ LL G +P Y
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 87
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 88 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 135
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 195
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 43/229 (18%)
Query: 245 REMFELNDLLRASAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDFHEH 299
R++++ D VLG+G+F V+L T + +K + + GKE E+
Sbjct: 17 RDIYDFRD-------VLGTGAFSE----VILAEDKRTQKLVAIKCIAKEALEGKEGSMEN 65
Query: 300 -MTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLL-----HVRRAPGQPGLDW 353
+ L + HPN++ L Y L+ V G L + + + R
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------ 119
Query: 354 PIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVL---LDNAYEPLLTDYALVPIVNK 410
++I V + YL+ + + H LK N+L LD + +++D+ L + +
Sbjct: 120 ----RLIFQVLDAVKYLH----DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 411 EHA---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANY 456
Y +PE ++ D WS+G++ LL G +P Y
Sbjct: 172 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFY 219
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL--L 312
+ LG+GSFG + +L+ TG +K + V + + L N L
Sbjct: 48 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 313 PLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAY 369
+ F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQIVL 153
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQT 428
++ + L + LK N+++D +TD+ V L Y +PE +
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
G + D W+LG+LI E+ G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 259 EVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HPN 310
+ LG+G+FG +A ++ + AM V + + M+ L LS H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-------- 362
++ L+ L+++++ G L N L +R P ++ +
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 363 -----VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-------IVNK 410
VAKG+A+L + H L + N+LL + + D+ L V K
Sbjct: 149 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 411 EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+A+L V + +PE T ++DVWS GI + EL +
Sbjct: 205 GNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 298 EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG---------- 347
E M +G H N++ L+ + ++ + G+L L RR PG
Sbjct: 92 EMMKMIGK--HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRV 149
Query: 348 -QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406
+ + + + +A+G+ YL + H L + NVL+ + D+ L
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 407 IVN------KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+N K V + +PE T ++DVWS G+L+ E+ T
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 259 EVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HPN 310
+ LG+G+FG +A ++ + AM V + + M+ L LS H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-------- 362
++ L+ L+++++ G L N L +R P ++ +
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 363 -----VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-------IVNK 410
VAKG+A+L + H L + N+LL + + D+ L V K
Sbjct: 165 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 411 EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+A+L V + +PE T ++DVWS GI + EL +
Sbjct: 221 GNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 46/219 (21%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQ--MSNVGKEDFHEHMTRLGSLSHPNLLPLIAF 317
+GSG++GS + + +G + VK+ + S + + + + L + H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 318 YYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLK-----------IIKGVAKG 366
F P SL V G D +K +I + +G
Sbjct: 119 ------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA-QLHMVAYKSPE- 424
L Y++ + H LK SN+ ++ E + D+ L + E + Y++PE
Sbjct: 167 LKYIH----SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 222
Query: 425 ------FNQTDGVTRKTDVWSLGILILELLTGK--FPAN 455
+N T D+WS+G ++ ELLTG+ FP
Sbjct: 223 MLNWMHYNMT------VDIWSVGCIMAELLTGRTLFPGT 255
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 95
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 96 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---------ARFYAA 143
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 203
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 359 IIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY--ALVPIVNKEHAQLH 416
IIK V +Y++ E + H +K SN+L+D L+D+ + + K
Sbjct: 156 IIKSVLNSFSYIHNE---KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRG 212
Query: 417 MVAYKSPEF--NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ PEF N++ K D+WSLGI + + P
Sbjct: 213 TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFXEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQTDGVTRKTDV 437
L + LK N+L+D +TD+ V L Y +PE + G + D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 438 WSLGILILELLTGKFP 453
W+LG+LI E+ G P
Sbjct: 243 WALGVLIYEMAAGYPP 258
>pdb|1D0B|A Chain A, Internalin B Leucine Rich Repeat Domain
Length = 213
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 118 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 173
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 174 KLQNLYLSKNHIS 186
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 141 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 197
Query: 66 KKVHL 70
+ L
Sbjct: 198 DVLEL 202
>pdb|2UZX|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZX|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Crystal Form I
pdb|2UZY|A Chain A, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2UZY|C Chain C, Structure Of The Human Receptor Tyrosine Kinase Met In
Complex With The Listeria Monocytogenes Invasion Protein
Inlb: Low Resolution, Crystal Form Ii
pdb|2WQU|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|C Chain C, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|D Chain D, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|E Chain E, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQU|F Chain F, Internalin Domain Of Listeria Monocytogenes Inlb:
Triclinic Crystal Form
pdb|2WQV|A Chain A, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
pdb|2WQV|B Chain B, Internalin Domain Of Listeria Monocytogenes Inlb:
Rhombohedral Crystal Form
Length = 289
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 121 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 176
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 177 KLQNLYLSKNHIS 189
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 144 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 200
Query: 66 KKVHL 70
+ L
Sbjct: 201 DVLEL 205
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 120 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 175
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 176 KLQNLYLSKNHIS 188
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 143 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 199
Query: 66 KKVHL 70
+ L
Sbjct: 200 DVLEL 204
>pdb|4AW4|A Chain A, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|B Chain B, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
pdb|4AW4|C Chain C, Engineered Variant Of Listeria Monocytogenes Inlb
Internalin Domain With An Additional Leucine Rich Repeat
Inserted
Length = 311
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 143 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 198
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 199 KLQNLYLSKNHIS 211
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 166 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 222
Query: 66 KKVHL 70
+ L
Sbjct: 223 DVLEL 227
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL--L 312
+ LG+GSFG + +L+ TG +K + V + + L N L
Sbjct: 48 KTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 104
Query: 313 PLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAY 369
+ F ++ L +V ++ P G + + H+RR +P + A +
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFS--HLRRIGRFXEPH---------ARFYAAQIVL 153
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQT 428
++ + L + LK N+++D +TD+ V L Y +PE +
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
G + D W+LG+LI E+ G P
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 259 EVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HPN 310
+ LG+G+FG +A ++ + AM V + + M+ L LS H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG-------- 362
++ L+ L+++++ G L N L +R P ++ +
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 363 -----VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-------IVNK 410
VAKG+A+L + H L + N+LL + + D+ L V K
Sbjct: 167 SFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 411 EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+A+L V + +PE T ++DVWS GI + EL +
Sbjct: 223 GNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2Y5Q|A Chain A, Listeria Monocytogenes Inlb (Internalin B) Residues 36-392
Length = 362
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 123 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 178
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 179 KLQNLYLSKNHIS 191
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 146 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 202
Query: 66 KKVHL 70
+ L
Sbjct: 203 DVLEL 207
>pdb|1H6T|A Chain A, Internalin B: Crystal Structure Of Fused N-Terminal
Domains
Length = 291
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 123 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 178
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 179 KLQNLYLSKNHIS 191
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 146 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 202
Query: 66 KKVHL 70
+ L
Sbjct: 203 DVLEL 207
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+++D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLIAFY 318
LG GSFG ++ TG VK+ R E F E + LS P ++PL
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA-KGLAYLYKEFPGV 377
+ + + GSL L+ Q G R G A +GL YL+
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIK------QMGCLPEDRALYYLGQALEGLEYLHTR---- 183
Query: 378 TLPHGHLKSSNVLLD-NAYEPLLTDYALVPIVNKEHAQLHMVA---------YKSPEFNQ 427
+ HG +K+ NVLL + L D+ + + ++ + +PE
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
K D+WS ++L +L G P
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|1OTM|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 141 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 196
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 197 KLQNLYLSKNHIS 209
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 164 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 220
Query: 66 KKVHL 70
+ L
Sbjct: 221 DVLEL 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 258 AEVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HP 309
+ LG+G+FG +A ++ + AM V + + M+ L LS H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG------- 362
N++ L+ L+++++ G L N L +R P ++ +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 363 ------VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-------IVN 409
VAKG+A+L + H L + N+LL + + D+ L V
Sbjct: 171 LSFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 410 KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
K +A+L V + +PE T ++DVWS GI + EL +
Sbjct: 227 KGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1OTN|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 141 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 196
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 197 KLQNLYLSKNHIS 209
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 164 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 220
Query: 66 KKVHL 70
+ L
Sbjct: 221 DVLEL 225
>pdb|1OTO|A Chain A, Calcium-Binding Mutant Of The Internalin B Lrr Domain
Length = 236
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P AG+
Sbjct: 141 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LAGLT 196
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 197 KLQNLYLSKNHIS 209
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQL 65
+ D+ LSRL L +LS +N +P G L+ LYLS N + A AG+ L
Sbjct: 164 ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISD---LRALAGLKNL 220
Query: 66 KKVHL 70
+ L
Sbjct: 221 DVLEL 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 379 LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQTDGVTRKTDV 437
L + LK N+L+D +TD+ V L Y +PE + G + D
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDW 242
Query: 438 WSLGILILELLTGKFP 453
W+LG+LI E+ G P
Sbjct: 243 WALGVLIYEMAAGYPP 258
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 23/204 (11%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKED---FHEHMTRLGSLSHPNLLPLIA 316
+G GS+G AV + + +++ ED F + + + SL HPN++ L
Sbjct: 33 TIGRGSWGEVKIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+ + LV + G L + +R + +I+K V +AY +K
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA-----ARIMKDVLSAVAYCHK---- 141
Query: 377 VTLPHGHLKSSNVLL--DNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDG 430
+ + H LK N L D+ PL L D+ L V Y SP+ +G
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV--LEG 199
Query: 431 VT-RKTDVWSLGILILELLTGKFP 453
+ + D WS G+++ LL G P
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 18/209 (8%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVK-----RFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
EV+G G F + + TG VK +F + ED + L HP++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L+ Y +V +F+ L + V+RA + ++ + + L Y +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 372 KEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKEH----AQLHMVAYKSPE 424
+ H +K VLL +N+ L + + + + ++ + +PE
Sbjct: 148 DN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 203
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + + DVW G+++ LL+G P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ +G+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTIGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V +++P G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D + D+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 18/209 (8%)
Query: 258 AEVLGSGSFGSSYKAV-LLTGPAMVVK-----RFRQMSNVGKEDFHEHMTRLGSLSHPNL 311
EV+G G F + + TG VK +F + ED + L HP++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 312 LPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY 371
+ L+ Y +V +F+ L + V+RA + ++ + + L Y +
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEI-VKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 372 KEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKEH----AQLHMVAYKSPE 424
+ H +K VLL +N+ L + + + + ++ + +PE
Sbjct: 150 DN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE 205
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ + + DVW G+++ LL+G P
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 23/204 (11%)
Query: 260 VLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKED---FHEHMTRLGSLSHPNLLPLIA 316
+G GS+G AV + + +++ ED F + + + SL HPN++ L
Sbjct: 16 TIGRGSWGEVKIAV--QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG 376
+ + LV + G L + +R + +I+K V +AY +K
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA-----ARIMKDVLSAVAYCHK---- 124
Query: 377 VTLPHGHLKSSNVLL--DNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDG 430
+ + H LK N L D+ PL L D+ L V Y SP+ +G
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV--LEG 182
Query: 431 VT-RKTDVWSLGILILELLTGKFP 453
+ + D WS G+++ LL G P
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 258 AEVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS----HP 309
+ LG+G+FG +A ++ + AM V + + M+ L LS H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 310 NLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG------- 362
N++ L+ L+++++ G L N L +R P ++ +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 363 ------VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP-------IVN 409
VAKG+A+L + H L + N+LL + + D+ L V
Sbjct: 171 LSFSYQVAKGMAFLASK----NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 410 KEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
K +A+L V + +PE T ++DVWS GI + EL +
Sbjct: 227 KGNARLP-VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)
Query: 259 EVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTR---LGSLSHPNL 311
+ +G+GSFG + +L+ TG +K + V + + L +++ P L
Sbjct: 47 KTIGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 312 LPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLA 368
+ L F ++ L +V +++P G + + H+RR +P + A +
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYMPGGDMFS--HLRRIGRFSEPH---------ARFYAAQIV 151
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEFNQ 427
++ + L + LK N+L+D + D+ V L Y +PE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIIL 211
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 81/220 (36%), Gaps = 36/220 (16%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSN-VGKEDFHEHMTRLGSLSHPNLLPLIA 316
+ LG G FG ++A + +KR R + + +E + L L HP ++
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 317 FYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDW------------PIRLKIIKGVA 364
+ K + P L + + R DW + L I +A
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLK--DWMNGRCTIEERERSVCLHIFLQIA 128
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV----------------PIV 408
+ + +L+ + L H LK SN+ + D+ LV P
Sbjct: 129 EAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 409 NKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
+ Q+ Y SPE + + K D++SLG+++ ELL
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-----YKSPEFNQT--DGVTR 433
H +K NVLLD L D+ +N + VA Y SPE Q DG+ +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 434 ---KTDVWSLGILILELLTGKFP 453
+ D WSLG+ + E+L G+ P
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETP 296
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-----YKSPEFNQT--DGVTR 433
H +K NVLLD L D+ +N + VA Y SPE Q DG+ +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 434 ---KTDVWSLGILILELLTGKFP 453
+ D WSLG+ + E+L G+ P
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETP 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI ++ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 35/218 (16%)
Query: 261 LGSGSFGSSYKAVLL----TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS----HPN 310
LG G+FG A + P V K +M S+ ++D + ++ + + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 311 LLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKI 359
++ L+ + ++ ++ G+L L R PG + L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 360 IKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM-- 417
VA+G+ YL + H L + NVL+ + D+ L ++ H +
Sbjct: 156 AYQVARGMEYLASK----KCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKT 209
Query: 418 ------VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
V + +PE T ++DVWS G+L+ E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 59/250 (23%)
Query: 244 DREMFELNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRFR---QMSNVGKEDFHEH 299
DR + +L++ LG G++G +K++ TG + VK+ Q S + F E
Sbjct: 4 DRHVLRKYELVKK----LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI 59
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEK--LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL 357
M H N++ L+ ++ LV D++ + L IR
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYM----------------ETDLHAVIRA 103
Query: 358 KIIKGVAKG-----LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-------- 404
I++ V K L + K L H +K SN+LL+ + D+ L
Sbjct: 104 NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163
Query: 405 -----VPIVNKEHAQ---------LHMVA---YKSPE-FNQTDGVTRKTDVWSLGILILE 446
+P+ E+ + VA Y++PE + T+ D+WSLG ++ E
Sbjct: 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGE 223
Query: 447 LLTGK--FPA 454
+L GK FP
Sbjct: 224 ILCGKPIFPG 233
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLIAFY 318
+G GSFG ++ TG VK+ R E F E + LS P ++PL
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA-KGLAYLYKEFPGV 377
+ + + GSL L+ Q G R G A +GL YL+
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIK------QMGCLPEDRALYYLGQALEGLEYLHTR---- 169
Query: 378 TLPHGHLKSSNVLLD-NAYEPLLTDYALVPIVNKEHAQLHMVA---------YKSPEFNQ 427
+ HG +K+ NVLL + L D+ + + ++ + +PE
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
K D+WS ++L +L G P
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLIAFY 318
LG GSFG ++ TG VK+ R E F E + L+ P ++PL
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+ + + GSL L+ Q L L + +GL YL+
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKE-----QGCLPEDRALYYLGQALEGLEYLHSR----R 205
Query: 379 LPHGHLKSSNVLLD-NAYEPLLTDYALVPIVNKEHAQLHMVA---------YKSPEFNQT 428
+ HG +K+ NVLL + L D+ + + ++ + +PE
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 429 DGVTRKTDVWSLGILILELLTGKFPANYLAQG 460
K DVWS ++L +L G P +G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 93/229 (40%), Gaps = 36/229 (15%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDF 296
N +R+ +L D VLG GSFG V+L T VK ++ + +D
Sbjct: 11 NGNRDRMKLTDF--NFLMVLGKGSFGK----VMLSERKGTDELYAVKILKKDVVIQDDDV 64
Query: 297 HEHMTRLGSLSHPNLLPLI----AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLD 352
M L+ P P + + + + V ++V G L + H+++ G+
Sbjct: 65 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQV-GR--FK 119
Query: 353 WPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH 412
P + +A GL +L + G+ + LK NV+LD+ + D+ + KE+
Sbjct: 120 EPHAVFYAAEIAIGLFFLQSK--GII--YRDLKLDNVMLDSEGHIKIADFGMC----KEN 171
Query: 413 AQLHMVA--------YKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ Y +PE + D W+ G+L+ E+L G+ P
Sbjct: 172 IWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 79/212 (37%), Gaps = 27/212 (12%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLIAFY 318
LG GSFG ++ TG VK+ R E F E + L+ P ++PL
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT 378
+ + + GSL L+ Q L L + +GL YL+
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKE-----QGCLPEDRALYYLGQALEGLEYLHSR----R 186
Query: 379 LPHGHLKSSNVLLD-NAYEPLLTDYALVPIVNKEHAQLHMVA---------YKSPEFNQT 428
+ HG +K+ NVLL + L D+ + + ++ + +PE
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 429 DGVTRKTDVWSLGILILELLTGKFPANYLAQG 460
K DVWS ++L +L G P +G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 32/227 (14%)
Query: 242 NNDREMFELNDLLRASAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMSNVGKEDF 296
N +R+ +L D VLG GSFG V+L T VK ++ + +D
Sbjct: 332 NGNRDRMKLTDF--NFLMVLGKGSFGK----VMLSERKGTDELYAVKILKKDVVIQDDDV 385
Query: 297 HEHMTRLGSLSHPNLLPLI----AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLD 352
M L+ P P + + + + V ++V G L + H+++ G+
Sbjct: 386 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQV-GR--FK 440
Query: 353 WPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP------ 406
P + +A GL +L + G+ + LK NV+LD+ + D+ +
Sbjct: 441 EPHAVFYAAEIAIGLFFLQSK--GII--YRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496
Query: 407 IVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ K Y +PE + D W+ G+L+ E+L G+ P
Sbjct: 497 VTTKXFCG--TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPE 424
+ ++ + L + LK N+L+D +TD+ V L Y +P
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPA 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 78/206 (37%), Gaps = 29/206 (14%)
Query: 261 LGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFH-EHMTRLGSLSHPNLLPLIAFY 318
+G GSFG ++ TG VK+ R E F E + LS P ++PL
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL------EVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVA-KGLAYLYKEFPGV 377
+ + + GSL L+ Q G R G A +GL YL+
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIK------QMGCLPEDRALYYLGQALEGLEYLHTR---- 185
Query: 378 TLPHGHLKSSNVLLD-NAYEPLLTDYALVPIVNKEHAQLHMVA---------YKSPEFNQ 427
+ HG +K+ NVLL + L D+ + + ++ + +PE
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
K D+WS ++L +L G P
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 127 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 181
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 240
Query: 471 V 471
+
Sbjct: 241 I 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 32/208 (15%)
Query: 260 VLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP 309
LG+GSFG ++ A+ + VVK +Q+ + E R+ +
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNE------KRIQQAVNF 101
Query: 310 NLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKG 366
L + F ++ L +V ++ P G + + H+RR +P + A
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFS--HLRRIGRFSEPH---------ARFYAAQ 150
Query: 367 LAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQL-HMVAYKSPEF 425
+ ++ + L + LK N+L+D + D+ V L Y +PE
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEI 210
Query: 426 NQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 126 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 180
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 239
Query: 471 V 471
+
Sbjct: 240 I 240
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 125 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 179
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 238
Query: 471 V 471
+
Sbjct: 239 I 239
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 135 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 189
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 248
Query: 471 V 471
+
Sbjct: 249 I 249
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 119 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 232
Query: 471 V 471
+
Sbjct: 233 I 233
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 120 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 174
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 233
Query: 471 V 471
+
Sbjct: 234 I 234
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 119 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 173
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 232
Query: 471 V 471
+
Sbjct: 233 I 233
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 165 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 278
Query: 471 V 471
+
Sbjct: 279 I 279
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 171 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 225
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 284
Query: 471 V 471
+
Sbjct: 285 I 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 121 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 234
Query: 471 V 471
+
Sbjct: 235 I 235
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I+K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 121 EIMKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 175
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470
+ Y +PE + + D+WSLG+++ LL G +P Y G + + T
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNHGLAISPGMKTR 234
Query: 471 V 471
+
Sbjct: 235 I 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 40/219 (18%)
Query: 261 LGSGSFGSSYKA-VLLTGPAMVVKRFRQMSNVGKE-DFHEHMTRLGSLSHPNLLPLIAFY 318
LG G++ + YK LT + +K R G ++ L L H N++ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 319 YRKEEKLLVSDFVPN---------GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAY 369
+ ++ LV +++ G++ N+ +V+ Q + +GLAY
Sbjct: 70 HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQ--------------LLRGLAY 115
Query: 370 LYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVAYKSPE 424
+++ + H LK N+L++ E L D+ L +P ++ ++ + Y+ P+
Sbjct: 116 CHRQ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN-EVVTLWYRPPD 170
Query: 425 --FNQTDGVTRKTDVWSLGILILELLTGK--FPANYLAQ 459
TD T + D+W +G + E+ TG+ FP + + +
Sbjct: 171 ILLGSTDYST-QIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 259 EVLGSGSFG----------SSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH 308
+ LG+GSFG ++ A+ + VVK +Q+ + E L +++
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEK-----RILQAVNF 100
Query: 309 PNLLPLIAFYYRKEEKL-LVSDFVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAK 365
P L+ L F ++ L +V ++V G + + H+RR +P + A
Sbjct: 101 PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFS--HLRRIGRFSEPH---------ARFYAA 148
Query: 366 GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYK-SPE 424
+ ++ + L + LK N+L+D +TD+ V L +PE
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPE 208
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGKFP 453
+ G + D W+LG+LI E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 321
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 322 NRAVDCWSLGVILFICLSGYPP 343
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 31/122 (25%)
Query: 355 IRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY--EPLLT------------ 400
I+L I+ + K L YL K ++L H LK N+LLD+ Y + L+T
Sbjct: 139 IKLYCIE-ILKALNYLRK----MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193
Query: 401 -----------DYALVPIVNKEHAQL-HMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
D+ + H + + Y++PE G +D+WS G ++ EL
Sbjct: 194 YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253
Query: 449 TG 450
TG
Sbjct: 254 TG 255
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 276 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 335
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 336 NRAVDCWSLGVILFICLSGYPP 357
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 197 NRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 197 NRAVDCWSLGVILFICLSGYPP 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 202
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 203 NRAVDCWSLGVILFICLSGYPP 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 195
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 196 NRAVDCWSLGVILFICLSGYPP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 381 HGHLKSSNVLLDNAYEPLL---TDYALVPIVNKEHAQLHMV---AYKSPEF---NQTDGV 431
H LK NVLL + E L TD+ I+ + + Y +PE T G
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGY 196
Query: 432 TRKTDVWSLGILILELLTGKFP 453
R D WSLG+++ L+G P
Sbjct: 197 NRAVDCWSLGVILFICLSGYPP 218
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLL--TDY-ALVPIVNKEHAQLHMVAYKSPE 424
A L+ P +++ H LK N+LL N + D+ + + + + + Y+SPE
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 209
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK 451
D+WSLG +++E+ TG+
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHTGE 236
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLL--TDY-ALVPIVNKEHAQLHMVAYKSPE 424
A L+ P +++ H LK N+LL N + D+ + + + + + Y+SPE
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK 451
D+WSLG +++E+ TG+
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|2WQW|A Chain A, Double-Disulfide Cross-Linked Crystal Dimer Of The
Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQW|B Chain B, Double-Disulfide Cross-Linked Crystal Dimer Of The
Listeria Monocytogenes Inlb Internalin Domain
Length = 286
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ + +P A +
Sbjct: 118 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQISDIVP---LACLT 173
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 174 KLQNLYLSKNHIS 186
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 9/39 (23%)
Query: 420 YKSPEF-----NQTDGVTRKTDVWSLGILILELLTGKFP 453
+++PE NQT + D+WS G++ L LL+G++P
Sbjct: 212 FRAPEVLTKCPNQTTAI----DMWSAGVIFLSLLSGRYP 246
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 22/233 (9%)
Query: 240 FVNNDREMFELNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHE 298
F + + + + D + S +VLG G G + TG +K +E H
Sbjct: 16 FQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHH 75
Query: 299 HMTRLGSLSHPNLLPLIAFY----YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWP 354
G P+++ ++ Y + K L++ + + G L + + R G
Sbjct: 76 WQASGG----PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER---GDQAFTER 128
Query: 355 IRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKE 411
+I++ + + +L+ + H +K N+L + + LTD+ +
Sbjct: 129 EAAEIMRDIGTAIQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN 184
Query: 412 HAQ--LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462
Q + Y +PE + + D+WSLG+++ LL G FP Y G+
Sbjct: 185 ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-FPPFYSNTGQA 236
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 368 AYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLL--TDY-ALVPIVNKEHAQLHMVAYKSPE 424
A L+ P +++ H LK N+LL N + D+ + + + + + Y+SPE
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Query: 425 FNQTDGVTRKTDVWSLGILILELLTGK 451
D+WSLG +++E+ TG+
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTGE 255
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 22/124 (17%)
Query: 354 PIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL-----DNAYEPLL--------- 399
P RL I+ +A + L H LK N+L AY P +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 400 -----TDYALVPIVNKEHAQL-HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTG--K 451
D+ ++ H+ L Y++PE G ++ DVWS+G +++E G
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 452 FPAN 455
FP +
Sbjct: 234 FPTH 237
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 22/124 (17%)
Query: 354 PIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL-----DNAYEPLL--------- 399
P RL I+ +A + L H LK N+L AY P +
Sbjct: 114 PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173
Query: 400 -----TDYALVPIVNKEHAQL-HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTG--K 451
D+ ++ H+ L Y++PE G ++ DVWS+G +++E G
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233
Query: 452 FPAN 455
FP +
Sbjct: 234 FPTH 237
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 22/225 (9%)
Query: 248 FELNDLLRASAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL 306
+ + D + S +VLG G G + TG +K +E H G
Sbjct: 5 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-- 62
Query: 307 SHPNLLPLIAFY----YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKG 362
P+++ ++ Y + K L++ + + G L + + R G +I++
Sbjct: 63 --PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER---GDQAFTEREAAEIMRD 117
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQ--LHM 417
+ + +L+ + H +K N+L + + LTD+ + Q +
Sbjct: 118 IGTAIQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 173
Query: 418 VAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462
Y +PE + + D+WSLG+++ LL G FP Y G+
Sbjct: 174 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-FPPFYSNTGQA 217
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L + V Y++PE G D+
Sbjct: 151 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDI 210
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 211 WSVGCIMGEMIKG 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 19/205 (9%)
Query: 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRF--RQMSNVGKEDFHEHMTRLGSLSHPNLLPLI 315
E +G G+F + V L TG K +++S + L H N++ L
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 316 AFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP 375
+ LV D V G L + R + I+ +I++ V L+
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILEAV------LHCHQM 122
Query: 376 GVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQT 428
GV H LK N+LL + + L D+ L V + A Y SPE +
Sbjct: 123 GVV--HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
+ + D+W+ G+++ LL G P
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 381 HGHLKSSNVLL--DNAYEPLLTDYAL----VPIVNKEHAQLH-------MVAYKSPEFNQ 427
HG +K++N+LL N + L DY L P N + Q + + + S + ++
Sbjct: 174 HGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK 233
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
++R++DV LG +L L GK P
Sbjct: 234 GVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS----LSHPNLLPL 314
E LG G+F + + + + + D H+ + R L HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 68
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ LV D V G L + R + I+ +I++ V +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILESVN------HCHL 121
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQ 427
G+ H LK N+LL + + L D+ L V + A Y SPE +
Sbjct: 122 NGIV--HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
D + D+W+ G+++ LL G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G+++ E++ G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 11/142 (7%)
Query: 12 LSRLPGLRSLSFINNSFDGPM--------PSVGKLTLRALYLSLNKFTGEIPSDAFAGMD 63
L R+P L+ L N F PS+ +L L L L + E+ D F G+
Sbjct: 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQL-AWETELCWDVFEGLS 480
Query: 64 QLKKVHLARNHFSGQIPKSXXXXXXXXXXXXXXXSFQG-KIPDFPLAHLTLLDLSYNQLV 122
L+ ++L N+ + P D P A+L +LD+S NQL+
Sbjct: 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLL 539
Query: 123 GRIPDTLSNFDATSFQGNKGLC 144
PD + NK +C
Sbjct: 540 APNPDVFVSLSVLDITHNKFIC 561
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNK----EH 412
+I K + GL Y+++ + H +K NVL++ P L + + N EH
Sbjct: 135 QISKQLLLGLDYMHRR---CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 413 A--QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKF 452
+ Y+SPE D+WS LI EL+TG F
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G+++ E++ G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 78/206 (37%), Gaps = 21/206 (10%)
Query: 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS----LSHPNLLPL 314
E LG G+F + + + + + D H+ + R L HPN++ L
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 68
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ LV D V G L + R + I+ +I++ V +
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ-QILESVN------HCHL 121
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPL---LTDYALVPIVNKEHAQLHMVA----YKSPEFNQ 427
G+ H LK N+LL + + L D+ L V + A Y SPE +
Sbjct: 122 NGIV--HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 428 TDGVTRKTDVWSLGILILELLTGKFP 453
D + D+W+ G+++ LL G P
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNK----EH 412
+I K + GL Y+++ + H +K NVL++ P L + + N EH
Sbjct: 135 QISKQLLLGLDYMHRR---CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 413 A--QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKF 452
+ Y+SPE D+WS LI EL+TG F
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Query: 357 LKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH---- 412
L I +A+ + +L+ + L H LK SN+ + D+ LV ++++
Sbjct: 167 LHIFIQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
Query: 413 ------------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELL 448
Q+ Y SPE + + K D++SLG+++ ELL
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 261 LGSGSFG---SSYKAVLLTGPAMV-VKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+GSG+ G ++Y AVL A+ + R Q K + E + + ++H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLN 128
Query: 317 FYYRKEEKLLVSDFVPNGSL--ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ ++ D L ANL V Q LD ++ + G+ +L+
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLCGIKHLH--- 181
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGV 431
+ H LK SN+++ + + D+ L V Y++PE G
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 432 TRKTDVWSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
D+WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 200 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 256 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 30/232 (12%)
Query: 241 VNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-KEDFHEH 299
++++RE E DL +G G++G YKA G +Q+ G
Sbjct: 11 LSSERERVE--DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE 68
Query: 300 MTRLGSLSHPNLLPLIAFYYRKEEK--LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL 357
+ L L HPN++ L + ++ L+ D+ + L +++ RA P++L
Sbjct: 69 IALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRA--SKANKKPVQL 125
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGH------LKSSNVLL----DNAYEPLLTDYALVPI 407
+G+ K L LY+ G+ H + LK +N+L+ + D +
Sbjct: 126 P--RGMVKSL--LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
Query: 408 VN---KEHAQLHMVA----YKSPEFN-QTDGVTRKTDVWSLGILILELLTGK 451
N K A L V Y++PE T+ D+W++G + ELLT +
Sbjct: 182 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 209 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 265 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 207 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 263 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 202 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 258 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 148 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 204 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 148 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 204 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 157 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 213 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 148 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 204 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 24/195 (12%)
Query: 269 SYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN---LLPLIAFYYRKEEKL 325
+ K ++LT P V R++ + + D H+++ ++ + P+ L +
Sbjct: 40 AIKKIVLTDPQSVKHALREIKIIRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLK 385
+V +++ LAN+L P L+ RL + + + +GL Y++ + H LK
Sbjct: 99 IVQEYM-ETDLANVLE-----QGPLLEEHARLFMYQ-LLRGLKYIH----SANVLHRDLK 147
Query: 386 SSNVLLDNAYEPL-LTDYALVPIVN-----KEHAQLHMVA--YKSPEFNQT-DGVTRKTD 436
+N+ ++ L + D+ L I++ K H +V Y+SP + + T+ D
Sbjct: 148 PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAID 207
Query: 437 VWSLGILILELLTGK 451
+W+ G + E+LTGK
Sbjct: 208 MWAAGCIFAEMLTGK 222
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 159 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 215 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 157 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 213 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 148 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 204 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM----- 417
VAKG+ +L H L + N+LL + D+ L + K+ +
Sbjct: 157 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 194 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 250 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 157 VAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 213 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2WQX|A Chain A, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
pdb|2WQX|B Chain B, Inlb321_4r: S199r, D200r, G206r, A227r, C242a Mutant Of
The Listeria Monocytogenes Inlb Internalin Domain
Length = 289
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLT-LRALYLSLNKFTGEIPSDAFAGMD 63
G+ D++ L LP L SL NN + + +LT L L L N+ +P A +
Sbjct: 121 GISDINGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQIRRIVP---LARLT 176
Query: 64 QLKKVHLARNHFS 76
+L+ ++L++NH S
Sbjct: 177 KLQNLYLSKNHIS 189
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L + V Y++PE G D+
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDI 206
Query: 438 WSLGILILELLTG 450
WS+G ++ EL+ G
Sbjct: 207 WSVGCIMGELVKG 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 210 WSVGCIMGEMIKG 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHM----- 417
VAKG+ +L H L + N+LL + D+ L + K+ +
Sbjct: 157 VAKGMEFLASR----KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 418 -VAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 281
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 210 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 259 EVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFH--EHMTRLGSLSHPNLL 312
+V+G GSFG KA V +V+ ++ E+ EH+ + + N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
++ + + + + + NL + + G P+ K + + L L+K
Sbjct: 163 HMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHAQLHMVA----YKSP 423
+ H LK N+LL + + +++ EH +++ Y++P
Sbjct: 219 N----RIIHCDLKPENILLKQ------QGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAP 268
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTG 450
E D+WSLG ++ ELLTG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 210 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 244
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 207
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 208 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 242
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 261 LGSGSFG---SSYKAVLLTGPAMV-VKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+GSG+ G ++Y AVL A+ + R Q K + E + + ++H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLN 90
Query: 317 FYYRKEEKLLVSDFVPNGSL--ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ ++ D L ANL V Q LD ++ + G+ +L+
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQV----IQMELDHERMSYLLYQMLXGIKHLH--- 143
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGV 431
+ H LK SN+++ + + D+ L V Y++PE G
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 432 TRKTDVWSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
D+WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 203 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 237
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 381 HGHLKSSNVLLD--NAYEPLLTDYALV-----PIVNKEHAQ----LHMVAYKSPEFNQTD 429
HG +K+SN+LL+ N + L DY L V+KE+ + H + + +
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHN 234
Query: 430 GV--TRKTDVWSLGILILELLTGKFP 453
GV +R+ D+ LG +++ LTG P
Sbjct: 235 GVAPSRRGDLEILGYCMIQWLTGHLP 260
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 381 HGHLKSSNVLLD--NAYEPLLTDYALV-----PIVNKEHAQ----LHMVAYKSPEFNQTD 429
HG +K+SN+LL+ N + L DY L V+KE+ + H + + +
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHN 234
Query: 430 GV--TRKTDVWSLGILILELLTGKFP 453
GV +R+ D+ LG +++ LTG P
Sbjct: 235 GVAPSRRGDLEILGYCMIQWLTGHLP 260
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 153 VAKGMEFLASR----KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 209 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 203 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 201
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 154 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 214 WSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 248
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 259 EVLGSGSFGSSYKA----VLLTGPAMVVKRFRQMSNVGKEDFH--EHMTRLGSLSHPNLL 312
+V+G GSFG KA V +V+ ++ E+ EH+ + + N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 313 PLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK 372
++ + + + + + NL + + G P+ K + + L L+K
Sbjct: 163 HMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 373 EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN-----KEHAQLHMVA----YKSP 423
+ H LK N+LL + + +++ EH +++ Y++P
Sbjct: 219 N----RIIHCDLKPENILLKQ------QGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAP 268
Query: 424 EFNQTDGVTRKTDVWSLGILILELLTG 450
E D+WSLG ++ ELLTG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 202
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 203 WSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 237
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 21/221 (9%)
Query: 261 LGSGSFG---SSYKAVLLTGPAMV-VKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIA 316
+GSG+ G ++Y A+L A+ + R Q K + E + + ++H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLN 90
Query: 317 FYYRKEEKLLVSDFVPNGSL--ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF 374
+ ++ D L ANL V Q LD ++ + G+ +L+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQV----IQMELDHERMSYLLYQMLCGIKHLH--- 143
Query: 375 PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGV 431
+ H LK SN+++ + + D+ L V Y++PE G
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 432 TRKTDVWSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
D+WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 15/167 (8%)
Query: 294 EDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDW 353
E ++ + L L HPN++ L+ E L F L N V P L
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVF----ELVNQGPVMEVPTLKPLSE 136
Query: 354 PIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA 413
+ + KG+ YL+ + + H +K SN+L+ + D+ + A
Sbjct: 137 DQARFYFQDLIKGIEYLHYQ----KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 414 QLHMV----AYKSPE-FNQTDGV--TRKTDVWSLGILILELLTGKFP 453
L A+ +PE ++T + + DVW++G+ + + G+ P
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 363 VAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV-------PIVNKEHAQL 415
VAKG+ +L H L + N+LL + D+ L V K A+L
Sbjct: 153 VAKGMEFLASR----KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 416 HMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT 449
+ + +PE T ++DVWS G+L+ E+ +
Sbjct: 209 PL-KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEP----LLTDYALVPIVNKEHA 413
+I K + + + YL+ + + H +K N LL + P LTD+ ++
Sbjct: 165 EIXKSIGEAIQYLH----SINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 414 ---QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQG 460
+ Y +PE + + D WSLG++ LL G +P Y G
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG-YPPFYSNHG 268
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDI 208
Query: 438 WSLGILILELLTG 450
WS+G ++ E++ G
Sbjct: 209 WSVGCIMGEMIKG 221
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 381 HGHLKSSNVLLD--NAYEPLLTDYALV-----PIVNKEHA----QLHMVAYKSPEFNQTD 429
HG +K+SN+LL+ N + L DY L V+K +A + H + + +
Sbjct: 175 HGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHN 234
Query: 430 GV--TRKTDVWSLGILILELLTGKFP 453
GV +R+ D+ LG +++ LTG P
Sbjct: 235 GVAPSRRGDLEILGYCMIQWLTGHLP 260
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 8 DVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKK 67
+V ++ L +++L + P G L+ LYL LN+ T P AG+ L+
Sbjct: 105 NVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP---LAGLTNLQY 161
Query: 68 VHLARNHFSGQIP 80
+ + N + P
Sbjct: 162 LSIGNNQVNDLTP 174
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 261 LGSGSFG---SSYKAVLLTGPAMVVKRFR---QMSNVGKEDFHEHMTRLGSLSHPNLLPL 314
+GSG+ G +++ VL G + VK+ Q K + E + L ++H N++ L
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRE-LVLLKCVNHKNIISL 88
Query: 315 IAFYYRK------EEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLA 368
+ + + ++ LV + + + +L ++H+ LD ++ + G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME-------LDHERMSYLLYQMLCGIK 140
Query: 369 YLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEF 425
+L+ + H LK SN+++ + + D+ L V Y++PE
Sbjct: 141 HLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 426 NQTDGVTRKTDVWSLGILILELLTG 450
G D+WS+G ++ EL+ G
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 19/110 (17%)
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409
G P+ K + + L L+K + H LK N+LL + + +++
Sbjct: 196 GFSLPLVRKFAHSILQCLDALHKN----RIIHCDLKPENILLKQ------QGRSGIKVID 245
Query: 410 -----KEHAQLHMVA----YKSPEFNQTDGVTRKTDVWSLGILILELLTG 450
EH +++ Y++PE D+WSLG ++ ELLTG
Sbjct: 246 FGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 87/234 (37%), Gaps = 33/234 (14%)
Query: 236 SKLHFVNNDREMFELNDLLRASAEVLGSGSFGSSYKAVLLTGPAM----VVKRFRQMSNV 291
SK+ + RE FE+ +V+G G+FG L + ++ ++ +
Sbjct: 64 SKVKQMRLHREDFEI-------LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA 116
Query: 292 GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSLANLLHV--RRAPGQP 349
F E L + + L + LV D+ G L LL R P +
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM 176
Query: 350 GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409
+ + I L Y++++ +K N+L+D L D+ +
Sbjct: 177 ARFYLAEMVIAIDSVHQLHYVHRD----------IKPDNILMDMNGHIRLADFGSCLKLM 226
Query: 410 KEHAQLHMVA-----YKSPEFNQT--DGVTR---KTDVWSLGILILELLTGKFP 453
++ VA Y SPE Q G R + D WSLG+ + E+L G+ P
Sbjct: 227 EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 41/227 (18%)
Query: 259 EVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNV---GKEDFHEHMTRLGSLSHPNLLPL 314
E +G+G++G A LTG + +K+ +V K E + L H N++ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAI 118
Query: 315 IAFYYRKEEKLLVSDFVPNGSLANL----------LHVRRAPGQPGLDWPIRLKIIKGVA 364
K ++ VP G ++ LH QP +R + + +
Sbjct: 119 ---------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQ-LL 168
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVA 419
+GL Y++ + H LK SN+L++ E + D+ + ++ VA
Sbjct: 169 RGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 420 ---YKSPEFNQT-DGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ 459
Y++PE + T+ D+WS+G + E+L + FP NY+ Q
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 271
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 16/107 (14%)
Query: 365 KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL-----VPIVNKEHAQLHMVA 419
+GL Y++ + H LK SN+L++ E + D+ + ++ VA
Sbjct: 170 RGLKYMH----SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 420 ---YKSPEFNQT-DGVTRKTDVWSLGILILELLTGK--FPA-NYLAQ 459
Y++PE + T+ D+WS+G + E+L + FP NY+ Q
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQ 272
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA---YKSPEFNQTDGVTRKTDV 437
H LK SN+++ + + D+ L V Y++PE G D+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDL 208
Query: 438 WSLGILILELLTGK--FPA-NYLAQGKGANADLAT 469
WS+G ++ E++ K FP +Y+ Q L T
Sbjct: 209 WSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGT 243
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 12/85 (14%)
Query: 381 HGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVA-----YKSPEFNQT------- 428
H +K N+LLD L D+ + + +VA Y SPE Q
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 429 DGVTRKTDVWSLGILILELLTGKFP 453
+ D W+LG+ E+ G+ P
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 292 GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEK--LLVSDFVPNGSLANLLHV--RRAPG 347
G+ + + + L L H N++ L+ Y +E++ +V ++ G L V +R P
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 348 QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA----YEPLLTDYA 403
+ +L GL YL+ + G+ H +K N+LL L A
Sbjct: 109 CQAHGYFCQL------IDGLEYLHSQ--GIV--HKDIKPGNLLLTTGGTLKISALGVAEA 158
Query: 404 LVPIVNKEHAQLHM--VAYKSPEF-NQTDGVTR-KTDVWSLGILILELLTGKFP 453
L P + + A++ PE N D + K D+WS G+ + + TG +P
Sbjct: 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1QZW|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
pdb|1QZW|C Chain C, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
pdb|1QZW|E Chain E, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
pdb|1QZW|G Chain G, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
pdb|1QZX|A Chain A, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
pdb|1QZX|B Chain B, Crystal Structure Of The Complete Core Of Archaeal Srp And
Implications For Inter-Domain Communication
Length = 440
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 3 LMGMIDVDT-LSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSL 47
++GM D+++ L ++ GL I + M GKLTLR +Y +
Sbjct: 299 ILGMGDIESILEKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQI 344
>pdb|3KL4|A Chain A, Recognition Of A Signal Peptide By The Signal Recognition
Particle
Length = 433
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 3 LMGMIDVDT-LSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSL 47
++GM D+++ L ++ GL I + M GKLTLR +Y +
Sbjct: 292 ILGMGDIESILEKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQI 337
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 22/201 (10%)
Query: 261 LGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH-PNLLPLIAFYY 319
LG G + ++A+ +T VV + + V K + L +L PN++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKI--LKPVKKNKIKREIKILENLRGGPNIITLADIVK 102
Query: 320 RKEEKL--LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377
+ LV + V N L Q D+ IR + + + K L Y + +
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYE-ILKALDYCH----SM 150
Query: 378 TLPHGHLKSSNVLLDNAYEPL-LTDYALVPIVNKEHAQLHMVA---YKSPEF-NQTDGVT 432
+ H +K NV++D+ + L L D+ L + VA +K PE
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYD 210
Query: 433 RKTDVWSLGILILELLTGKFP 453
D+WSLG ++ ++ K P
Sbjct: 211 YSLDMWSLGCMLASMIFRKEP 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,361,953
Number of Sequences: 62578
Number of extensions: 675020
Number of successful extensions: 3077
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 640
Number of HSP's that attempted gapping in prelim test: 1926
Number of HSP's gapped (non-prelim): 1108
length of query: 565
length of database: 14,973,337
effective HSP length: 104
effective length of query: 461
effective length of database: 8,465,225
effective search space: 3902468725
effective search space used: 3902468725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)