Query 008431
Match_columns 565
No_of_seqs 637 out of 4006
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 03:24:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008431.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008431hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 4.5E-57 1.5E-61 450.9 21.3 253 257-532 17-290 (299)
2 4aoj_A High affinity nerve gro 100.0 1.1E-56 3.8E-61 454.1 24.0 254 257-533 45-321 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 1.7E-56 5.7E-61 448.6 22.3 250 257-529 30-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 3.1E-56 1.1E-60 444.9 22.9 251 257-532 40-301 (307)
5 3hmm_A TGF-beta receptor type- 100.0 6.2E-55 2.1E-59 437.9 18.9 264 257-532 7-298 (303)
6 4fih_A Serine/threonine-protei 100.0 1.6E-54 5.5E-59 438.0 21.7 241 257-524 78-323 (346)
7 3fpq_A Serine/threonine-protei 100.0 4.1E-54 1.4E-58 426.6 24.1 242 258-524 31-282 (290)
8 4b9d_A Serine/threonine-protei 100.0 2.1E-54 7.3E-59 437.8 20.0 243 257-525 28-277 (350)
9 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-54 1.5E-58 433.6 20.5 245 257-532 62-317 (336)
10 4fie_A Serine/threonine-protei 100.0 3E-53 1E-57 439.1 22.8 241 257-524 155-400 (423)
11 4ase_A Vascular endothelial gr 100.0 1.1E-53 3.8E-58 435.7 19.1 256 256-533 67-349 (353)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.6E-53 5.6E-58 424.4 17.2 240 256-524 35-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.2E-52 4.1E-57 412.5 22.3 238 257-524 17-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-52 4.3E-57 417.9 16.2 235 256-519 27-271 (304)
15 4g31_A Eukaryotic translation 100.0 9.8E-51 3.4E-55 405.6 21.2 241 257-524 9-279 (299)
16 4b99_A Mitogen-activated prote 100.0 3.6E-48 1.2E-52 401.7 21.7 251 257-525 58-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2.4E-47 8.3E-52 391.3 21.6 185 257-455 25-248 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 6E-47 2.1E-51 411.3 22.1 245 256-524 160-410 (573)
19 2qkw_B Protein kinase; three-h 100.0 4.6E-46 1.6E-50 377.6 22.9 269 257-533 43-317 (321)
20 3v5w_A G-protein coupled recep 100.0 1.8E-46 6.2E-51 405.4 20.7 242 257-524 193-449 (689)
21 3uim_A Brassinosteroid insensi 100.0 3.8E-46 1.3E-50 378.9 20.5 270 257-529 34-309 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-44 4.2E-49 365.1 25.0 251 257-533 14-284 (310)
23 3fxz_A Serine/threonine-protei 100.0 1.2E-44 4.2E-49 363.0 23.4 241 257-524 24-269 (297)
24 4hcu_A Tyrosine-protein kinase 100.0 2.3E-44 7.9E-49 355.5 22.3 248 257-532 14-267 (269)
25 3soc_A Activin receptor type-2 100.0 4.8E-45 1.6E-49 370.3 16.9 263 257-532 28-319 (322)
26 3p86_A Serine/threonine-protei 100.0 1.6E-44 5.4E-49 364.3 20.3 255 256-535 40-302 (309)
27 3fe3_A MAP/microtubule affinit 100.0 3.5E-44 1.2E-48 364.6 22.4 240 257-525 19-265 (328)
28 2psq_A Fibroblast growth facto 100.0 2.6E-44 9E-49 371.9 21.6 254 257-533 85-366 (370)
29 2c30_A Serine/threonine-protei 100.0 1.3E-43 4.5E-48 359.5 25.7 242 257-525 49-295 (321)
30 3kul_A Ephrin type-A receptor 100.0 2.9E-44 1E-48 365.0 20.7 250 257-533 53-315 (325)
31 3zgw_A Maternal embryonic leuc 100.0 5.2E-44 1.8E-48 365.6 21.8 240 257-525 14-261 (347)
32 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-44 5.2E-49 374.8 17.6 249 257-532 118-375 (377)
33 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.8E-44 1.7E-48 352.9 20.4 249 257-533 12-266 (268)
34 3q4u_A Activin receptor type-1 100.0 5.9E-44 2E-48 358.2 20.3 251 257-529 12-300 (301)
35 2qol_A Ephrin receptor; recept 100.0 4.3E-44 1.5E-48 370.6 19.6 249 257-532 49-310 (373)
36 3ugc_A Tyrosine-protein kinase 100.0 5.1E-44 1.8E-48 357.9 18.9 259 257-533 14-293 (295)
37 3gen_A Tyrosine-protein kinase 100.0 1.8E-43 6.1E-48 351.7 22.4 248 257-532 28-281 (283)
38 4eqm_A Protein kinase; transfe 100.0 3.8E-43 1.3E-47 351.7 24.5 259 257-539 15-283 (294)
39 1qcf_A Haematopoetic cell kina 100.0 1.3E-43 4.5E-48 376.7 21.9 250 256-533 191-446 (454)
40 1o6l_A RAC-beta serine/threoni 100.0 4.1E-43 1.4E-47 357.8 24.4 240 257-525 9-261 (337)
41 3tt0_A Basic fibroblast growth 100.0 3.3E-43 1.1E-47 365.4 23.2 255 256-533 72-354 (382)
42 2nru_A Interleukin-1 receptor- 100.0 9.4E-43 3.2E-47 350.7 25.8 259 259-531 37-306 (307)
43 3lb7_A RAF proto-oncogene seri 100.0 3.4E-43 1.1E-47 354.3 21.9 253 256-533 39-302 (307)
44 1k9a_A Carboxyl-terminal SRC k 100.0 3.3E-43 1.1E-47 373.1 22.7 248 257-533 197-447 (450)
45 3l9p_A Anaplastic lymphoma kin 100.0 1.5E-43 5.1E-48 365.8 19.2 253 257-532 75-346 (367)
46 4fvq_A Tyrosine-protein kinase 100.0 3.2E-43 1.1E-47 350.8 20.6 248 257-533 12-277 (289)
47 3t9t_A Tyrosine-protein kinase 100.0 5.4E-43 1.8E-47 344.9 21.9 248 257-532 12-265 (267)
48 2yab_A Death-associated protei 100.0 7.5E-43 2.6E-47 359.1 23.7 243 257-524 16-272 (361)
49 3poz_A Epidermal growth factor 100.0 2.4E-43 8.1E-48 358.6 19.0 248 257-532 19-279 (327)
50 1tki_A Titin; serine kinase, m 100.0 4.9E-43 1.7E-47 355.2 21.2 244 257-525 9-258 (321)
51 1luf_A Muscle-specific tyrosin 100.0 3.7E-43 1.2E-47 359.3 20.1 254 257-533 51-337 (343)
52 2y0a_A Death-associated protei 100.0 1.3E-42 4.5E-47 352.9 23.9 243 257-524 15-271 (326)
53 3op5_A Serine/threonine-protei 100.0 8.3E-43 2.8E-47 360.0 22.3 259 257-533 39-331 (364)
54 1opk_A P150, C-ABL, proto-onco 100.0 3E-43 1E-47 377.7 19.6 249 256-531 223-478 (495)
55 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.4E-43 1.8E-47 371.7 21.1 251 256-534 187-443 (452)
56 2x4f_A Myosin light chain kina 100.0 5.9E-43 2E-47 361.9 20.9 243 258-524 94-342 (373)
57 4euu_A Serine/threonine-protei 100.0 2.6E-42 9E-47 349.6 25.2 265 257-531 13-309 (319)
58 4dc2_A Protein kinase C IOTA t 100.0 8.4E-43 2.9E-47 362.3 21.7 243 257-519 56-307 (396)
59 3vhe_A Vascular endothelial gr 100.0 1.4E-43 4.9E-48 364.7 15.8 255 256-532 25-356 (359)
60 1mp8_A Focal adhesion kinase 1 100.0 5.5E-43 1.9E-47 348.0 19.4 249 256-532 18-277 (281)
61 2bdw_A Hypothetical protein K1 100.0 1.5E-42 5E-47 357.6 23.1 245 256-525 32-285 (362)
62 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.6E-43 2.9E-47 355.2 20.9 239 257-525 13-259 (336)
63 3soa_A Calcium/calmodulin-depe 100.0 1.7E-42 5.7E-47 365.9 23.8 244 257-525 15-268 (444)
64 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.8E-43 1.3E-47 360.4 18.3 239 257-524 27-280 (353)
65 3dtc_A Mitogen-activated prote 100.0 9.1E-43 3.1E-47 344.2 20.2 244 257-529 11-271 (271)
66 3kmu_A ILK, integrin-linked ki 100.0 8.4E-43 2.9E-47 344.0 19.9 248 257-531 14-270 (271)
67 3gxj_A TGF-beta receptor type- 100.0 1.9E-44 6.3E-49 362.1 8.0 255 257-533 7-299 (303)
68 4f0f_A Serine/threonine-protei 100.0 1.8E-42 6.1E-47 345.2 22.2 247 257-529 23-287 (287)
69 3c0i_A Peripheral plasma membr 100.0 1.2E-42 4E-47 357.0 21.4 247 256-524 27-286 (351)
70 2ivs_A Proto-oncogene tyrosine 100.0 6.4E-43 2.2E-47 352.8 18.7 254 256-532 26-312 (314)
71 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-42 4.8E-47 351.2 21.2 239 257-524 10-258 (318)
72 3qup_A Tyrosine-protein kinase 100.0 1E-42 3.4E-47 353.2 20.2 255 256-533 26-300 (323)
73 3niz_A Rhodanese family protei 100.0 1.1E-42 3.8E-47 351.1 20.4 254 257-524 25-300 (311)
74 1u5q_A Serine/threonine protei 100.0 1.7E-42 5.7E-47 355.2 21.9 244 257-527 58-308 (348)
75 1kob_A Twitchin; kinase, intra 100.0 1.5E-42 5.1E-47 360.2 21.7 245 257-525 55-305 (387)
76 3qd2_B Eukaryotic translation 100.0 2.6E-42 9E-47 350.9 22.9 241 257-524 10-325 (332)
77 2eva_A TAK1 kinase - TAB1 chim 100.0 3.2E-42 1.1E-46 347.1 23.2 257 257-538 12-270 (307)
78 1t46_A HOMO sapiens V-KIT hard 100.0 1.2E-42 4E-47 350.7 20.0 256 256-533 26-309 (313)
79 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-42 4.9E-47 346.5 20.3 250 257-531 28-288 (289)
80 3c1x_A Hepatocyte growth facto 100.0 7.3E-43 2.5E-47 361.1 18.4 252 257-535 93-359 (373)
81 3pls_A Macrophage-stimulating 100.0 4.6E-42 1.6E-46 343.9 23.1 254 257-536 25-292 (298)
82 3a8x_A Protein kinase C IOTA t 100.0 2.1E-42 7E-47 354.0 20.9 243 257-519 13-264 (345)
83 1ob3_A PFPK5, cell division co 100.0 2.3E-42 8E-47 344.7 20.7 251 257-524 6-280 (288)
84 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.5E-42 8.7E-47 354.0 21.4 239 257-524 45-293 (350)
85 2w4o_A Calcium/calmodulin-depe 100.0 3.1E-42 1E-46 353.6 21.9 242 257-524 57-305 (349)
86 4fr4_A YANK1, serine/threonine 100.0 3.8E-42 1.3E-46 356.1 22.8 242 257-524 19-271 (384)
87 1rjb_A FL cytokine receptor; k 100.0 1.5E-42 5E-47 355.1 19.1 256 256-533 48-336 (344)
88 3a62_A Ribosomal protein S6 ki 100.0 5.1E-42 1.7E-46 348.8 22.8 239 257-524 21-276 (327)
89 3mdy_A Bone morphogenetic prot 100.0 8.7E-42 3E-46 348.1 24.5 259 257-533 41-333 (337)
90 3tki_A Serine/threonine-protei 100.0 8.7E-43 3E-47 353.8 16.8 243 257-525 11-262 (323)
91 1csn_A Casein kinase-1; phosph 100.0 4.3E-42 1.5E-46 344.1 21.5 254 257-533 14-285 (298)
92 2pvf_A Fibroblast growth facto 100.0 3.7E-42 1.3E-46 350.9 21.3 256 255-533 37-320 (334)
93 1xjd_A Protein kinase C, theta 100.0 1.3E-42 4.3E-47 355.2 17.9 238 257-523 21-268 (345)
94 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-42 7.6E-47 346.6 19.2 240 257-524 17-292 (298)
95 3kfa_A Tyrosine-protein kinase 100.0 2.4E-42 8.2E-47 344.3 19.2 250 256-532 16-272 (288)
96 2pmi_A Negative RE, cyclin-dep 100.0 6.1E-42 2.1E-46 346.7 22.5 258 257-524 9-293 (317)
97 2izr_A Casein kinase I isoform 100.0 1.9E-42 6.5E-47 352.4 18.8 252 257-532 13-282 (330)
98 2ozo_A Tyrosine-protein kinase 100.0 4.4E-42 1.5E-46 377.3 23.0 246 260-533 343-600 (613)
99 3uc3_A Serine/threonine-protei 100.0 3E-42 1E-46 355.2 20.4 245 257-525 24-275 (361)
100 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-42 7.4E-47 374.4 20.2 250 256-533 270-525 (535)
101 3kex_A Receptor tyrosine-prote 100.0 1.7E-42 5.9E-47 351.9 18.2 248 257-532 17-277 (325)
102 3is5_A Calcium-dependent prote 100.0 7.4E-42 2.5E-46 340.6 22.4 245 257-524 26-278 (285)
103 1mqb_A Ephrin type-A receptor 100.0 7.1E-42 2.4E-46 348.7 22.7 250 257-533 48-311 (333)
104 3f66_A Hepatocyte growth facto 100.0 4.3E-42 1.5E-46 344.3 20.8 252 257-535 29-295 (298)
105 3o0g_A Cell division protein k 100.0 8.3E-42 2.8E-46 341.4 22.5 252 257-524 6-282 (292)
106 3v8s_A RHO-associated protein 100.0 1.8E-42 6E-47 361.7 18.3 243 257-525 73-330 (410)
107 3lzb_A Epidermal growth factor 100.0 5.1E-42 1.8E-46 348.8 21.0 248 257-532 19-279 (327)
108 2i0e_A Protein kinase C-beta I 100.0 4.8E-42 1.6E-46 352.0 20.8 239 257-524 24-276 (353)
109 3kn6_A Ribosomal protein S6 ki 100.0 2.6E-42 9E-47 350.6 18.5 246 258-524 16-270 (325)
110 4ejn_A RAC-alpha serine/threon 100.0 2.8E-42 9.5E-47 365.8 19.4 239 257-524 152-404 (446)
111 4e5w_A Tyrosine-protein kinase 100.0 3.9E-42 1.3E-46 345.2 19.4 256 257-530 25-301 (302)
112 3p1a_A MYT1 kinase, membrane-a 100.0 8.7E-42 3E-46 344.6 22.0 238 256-524 60-304 (311)
113 1u59_A Tyrosine-protein kinase 100.0 5.6E-42 1.9E-46 341.7 20.2 247 259-533 16-274 (287)
114 1b6c_B TGF-B superfamily recep 100.0 6.6E-42 2.2E-46 349.8 21.1 255 257-533 46-338 (342)
115 2h34_A Serine/threonine-protei 100.0 2.9E-41 1E-45 340.4 25.4 251 257-533 38-298 (309)
116 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-41 4.9E-46 336.9 22.6 242 257-524 13-261 (277)
117 1p4o_A Insulin-like growth fac 100.0 7.4E-42 2.5E-46 346.5 21.0 253 257-532 29-300 (322)
118 2buj_A Serine/threonine-protei 100.0 8.7E-42 3E-46 345.2 21.4 255 257-533 33-308 (317)
119 3lxl_A Tyrosine-protein kinase 100.0 2.1E-42 7.3E-47 351.5 16.8 261 257-535 27-307 (327)
120 3ork_A Serine/threonine protei 100.0 3.2E-42 1.1E-46 347.7 17.9 251 257-532 16-282 (311)
121 1qpc_A LCK kinase; alpha beta 100.0 6.9E-42 2.4E-46 339.5 19.9 249 257-533 17-271 (279)
122 2v62_A Serine/threonine-protei 100.0 1.3E-42 4.3E-47 356.0 14.9 256 257-531 41-328 (345)
123 3brb_A Proto-oncogene tyrosine 100.0 1.1E-41 3.6E-46 344.1 21.5 255 255-532 36-309 (313)
124 4aw2_A Serine/threonine-protei 100.0 3.6E-42 1.2E-46 362.2 18.6 246 257-525 78-339 (437)
125 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6E-42 2.1E-46 353.7 19.9 246 257-533 69-341 (365)
126 3gni_B Strad alpha; kinase fol 100.0 8E-42 2.7E-46 355.9 20.9 193 257-456 29-239 (389)
127 3cc6_A Protein tyrosine kinase 100.0 8.7E-42 3E-46 339.2 20.1 248 257-532 16-274 (281)
128 1nxk_A MAP kinase-activated pr 100.0 1.1E-41 3.8E-46 355.7 21.8 245 258-526 67-323 (400)
129 2y94_A 5'-AMP-activated protei 100.0 7.3E-42 2.5E-46 363.4 20.6 240 257-525 20-267 (476)
130 2ac3_A MAP kinase-interacting 100.0 1.4E-41 4.7E-46 343.6 21.6 251 258-524 18-295 (316)
131 2a2a_A Death-associated protei 100.0 2.8E-41 9.5E-46 342.4 23.8 243 257-524 16-272 (321)
132 1t4h_A Serine/threonine-protei 100.0 3.3E-41 1.1E-45 336.6 24.0 241 257-524 30-282 (290)
133 4fl3_A Tyrosine-protein kinase 100.0 6.7E-42 2.3E-46 376.9 20.8 245 259-532 375-632 (635)
134 2wqm_A Serine/threonine-protei 100.0 1.7E-41 5.7E-46 342.1 22.0 256 257-533 36-299 (310)
135 2eue_A Carbon catabolite derep 100.0 1E-41 3.4E-46 337.7 20.0 239 257-525 17-263 (275)
136 3g2f_A Bone morphogenetic prot 100.0 4.8E-42 1.7E-46 350.0 17.9 269 257-539 17-326 (336)
137 2r5t_A Serine/threonine-protei 100.0 6.2E-42 2.1E-46 353.7 18.9 238 257-523 42-288 (373)
138 1fvr_A Tyrosine-protein kinase 100.0 1.8E-41 6E-46 344.7 21.7 257 257-536 29-305 (327)
139 3fdn_A Serine/threonine-protei 100.0 1.6E-41 5.4E-46 337.0 20.9 240 257-525 13-258 (279)
140 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-42 5.3E-47 351.2 13.8 257 257-533 35-312 (318)
141 3bhy_A Death-associated protei 100.0 8.9E-41 3.1E-45 332.1 25.9 252 257-533 9-276 (283)
142 2jam_A Calcium/calmodulin-depe 100.0 4.3E-41 1.5E-45 338.2 23.7 244 257-525 13-262 (304)
143 2a19_B Interferon-induced, dou 100.0 2.7E-41 9.3E-46 335.7 22.0 242 257-533 15-276 (284)
144 1byg_A CSK, protein (C-termina 100.0 5.7E-42 1.9E-46 340.0 16.9 248 257-533 25-275 (278)
145 3llt_A Serine/threonine kinase 100.0 3.9E-41 1.3E-45 346.8 23.5 190 257-455 39-260 (360)
146 2vd5_A DMPK protein; serine/th 100.0 1E-41 3.5E-46 356.2 19.2 245 257-525 65-328 (412)
147 3ll6_A Cyclin G-associated kin 100.0 7.4E-42 2.5E-46 348.3 17.7 250 255-533 30-310 (337)
148 3mtl_A Cell division protein k 100.0 9.6E-42 3.3E-46 346.3 18.4 269 257-539 6-298 (324)
149 4eut_A Serine/threonine-protei 100.0 1.1E-41 3.9E-46 355.5 19.5 267 257-533 13-311 (396)
150 3kk8_A Calcium/calmodulin depe 100.0 3.7E-41 1.3E-45 335.0 22.3 244 257-525 10-262 (284)
151 3dbq_A Dual specificity protei 100.0 1.3E-41 4.6E-46 348.0 19.4 242 257-526 13-275 (343)
152 1x8b_A WEE1HU, WEE1-like prote 100.0 3.2E-41 1.1E-45 335.6 21.5 241 257-524 15-279 (289)
153 2i1m_A Macrophage colony-stimu 100.0 6.3E-42 2.2E-46 348.8 16.7 254 257-532 50-327 (333)
154 2xir_A Vascular endothelial gr 100.0 9.2E-42 3.2E-46 344.6 17.6 256 256-533 30-312 (316)
155 3hko_A Calcium/calmodulin-depe 100.0 1.7E-41 5.9E-46 347.2 19.9 249 257-525 30-331 (345)
156 3cok_A Serine/threonine-protei 100.0 2.4E-41 8.3E-46 335.4 20.3 240 257-524 15-262 (278)
157 1xbb_A Tyrosine-protein kinase 100.0 1.7E-41 5.8E-46 339.0 19.3 245 259-532 23-280 (291)
158 3dls_A PAS domain-containing s 100.0 1.1E-41 3.6E-46 347.6 18.0 234 257-525 28-275 (335)
159 3oz6_A Mitogen-activated prote 100.0 2E-41 6.9E-46 352.7 20.5 188 257-455 13-232 (388)
160 2zmd_A Dual specificity protei 100.0 2.5E-41 8.5E-46 352.0 21.1 241 257-525 60-321 (390)
161 2w1i_A JAK2; chromosomal rearr 100.0 1.1E-41 3.7E-46 346.2 17.9 258 257-532 45-323 (326)
162 2jii_A Serine/threonine-protei 100.0 1.9E-41 6.4E-46 348.2 19.4 255 257-533 46-338 (352)
163 2j7t_A Serine/threonine-protei 100.0 2.3E-41 7.7E-46 339.6 19.6 243 257-524 23-275 (302)
164 3g33_A Cell division protein k 100.0 5.5E-41 1.9E-45 338.1 22.1 252 257-524 13-296 (308)
165 3mwu_A Calmodulin-domain prote 100.0 1.2E-40 4.1E-45 357.2 25.7 243 257-525 26-277 (486)
166 3byv_A Rhoptry kinase; malaria 100.0 3.3E-42 1.1E-46 357.3 12.8 243 257-529 77-366 (377)
167 3ttj_A Mitogen-activated prote 100.0 3.1E-41 1E-45 358.8 20.4 249 257-525 66-356 (464)
168 4agu_A Cyclin-dependent kinase 100.0 5.2E-41 1.8E-45 338.6 21.1 255 257-525 7-285 (311)
169 2h6d_A 5'-AMP-activated protei 100.0 1.4E-40 5E-45 329.3 23.9 240 257-525 15-262 (276)
170 2acx_A G protein-coupled recep 100.0 3.2E-41 1.1E-45 363.6 20.7 246 257-525 188-445 (576)
171 3uzp_A CKI-delta, CKID, casein 100.0 8.8E-41 3E-45 334.2 22.4 254 257-533 13-282 (296)
172 2yfx_A Tyrosine-protein kinase 100.0 3.3E-41 1.1E-45 342.7 19.5 253 257-532 34-305 (327)
173 2clq_A Mitogen-activated prote 100.0 5.7E-41 2E-45 335.4 20.4 244 258-524 27-278 (295)
174 3lij_A Calcium/calmodulin depe 100.0 9.6E-41 3.3E-45 358.6 23.4 243 257-525 41-292 (494)
175 2vgo_A Serine/threonine-protei 100.0 6.6E-41 2.2E-45 333.4 20.6 239 257-524 18-262 (284)
176 3nyv_A Calmodulin-domain prote 100.0 8E-41 2.7E-45 358.4 22.7 243 257-525 30-282 (484)
177 2rku_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 335.9 19.8 240 257-525 19-266 (294)
178 2w5a_A Serine/threonine-protei 100.0 1.9E-41 6.6E-46 336.1 16.6 248 257-528 10-271 (279)
179 1vzo_A Ribosomal protein S6 ki 100.0 3.8E-41 1.3E-45 346.3 19.2 245 257-526 58-323 (355)
180 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.2E-41 1.1E-45 343.2 18.4 250 257-524 38-318 (329)
181 3eqc_A Dual specificity mitoge 100.0 5.5E-41 1.9E-45 345.8 20.2 191 257-455 37-231 (360)
182 3i6u_A CDS1, serine/threonine- 100.0 2.6E-41 9E-46 355.2 18.1 243 257-524 139-399 (419)
183 3a7i_A MST3 kinase, serine/thr 100.0 1E-40 3.5E-45 335.2 21.3 242 257-527 26-273 (303)
184 2owb_A Serine/threonine-protei 100.0 4.9E-41 1.7E-45 342.8 19.1 240 257-525 45-292 (335)
185 2y7j_A Phosphorylase B kinase 100.0 1.9E-40 6.5E-45 342.3 23.7 243 257-524 98-359 (365)
186 4hgt_A Casein kinase I isoform 100.0 5.6E-41 1.9E-45 335.5 18.9 254 257-533 13-282 (296)
187 1cm8_A Phosphorylated MAP kina 100.0 8.5E-41 2.9E-45 345.1 20.5 248 257-525 29-308 (367)
188 2yex_A Serine/threonine-protei 100.0 1.1E-40 3.9E-45 330.0 20.5 242 257-524 11-261 (276)
189 3rp9_A Mitogen-activated prote 100.0 1.8E-41 6E-46 361.0 15.6 184 257-450 57-280 (458)
190 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-40 4.2E-45 358.1 22.0 246 258-524 190-448 (543)
191 2qr7_A Ribosomal protein S6 ki 100.0 2.1E-41 7.3E-46 346.1 15.2 243 257-525 26-278 (342)
192 3lm5_A Serine/threonine-protei 100.0 9.9E-41 3.4E-45 339.3 19.9 245 258-525 34-288 (327)
193 3q60_A ROP5B; pseudokinase, tr 100.0 1E-41 3.4E-46 352.8 12.7 247 257-524 66-352 (371)
194 1u46_A ACK-1, activated CDC42 100.0 4E-41 1.4E-45 335.8 16.6 250 257-533 22-286 (291)
195 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-40 6.4E-45 357.2 22.7 243 257-525 40-302 (504)
196 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.6E-41 1.6E-45 340.1 16.8 250 257-535 37-306 (319)
197 3com_A Serine/threonine-protei 100.0 2.8E-40 9.4E-45 333.7 22.4 241 257-524 33-278 (314)
198 3kvw_A DYRK2, dual specificity 100.0 1.8E-40 6.3E-45 349.7 21.8 190 257-455 101-300 (429)
199 1ua2_A CAK, cell division prot 100.0 1.2E-40 3.9E-45 341.5 19.7 252 257-525 14-292 (346)
200 4aaa_A Cyclin-dependent kinase 100.0 4.6E-41 1.6E-45 342.3 16.3 256 257-525 29-307 (331)
201 3rgf_A Cyclin-dependent kinase 100.0 1.6E-40 5.4E-45 348.0 20.2 199 251-456 19-238 (405)
202 2j0j_A Focal adhesion kinase 1 100.0 1.8E-40 6.2E-45 366.8 21.3 249 255-531 392-651 (656)
203 3fme_A Dual specificity mitoge 100.0 1.5E-40 5.2E-45 331.5 18.2 246 257-524 11-266 (290)
204 2r3i_A Cell division protein k 100.0 5.4E-40 1.9E-44 329.1 22.2 252 257-524 7-283 (299)
205 3n9x_A Phosphotransferase; mal 100.0 3.1E-40 1E-44 348.5 21.4 189 257-455 30-253 (432)
206 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-40 5.5E-45 368.4 20.0 239 257-524 345-597 (674)
207 2vwi_A Serine/threonine-protei 100.0 7.9E-41 2.7E-45 335.6 15.9 251 257-524 19-287 (303)
208 3eb0_A Putative uncharacterize 100.0 1.3E-40 4.5E-45 345.9 17.9 257 257-531 11-330 (383)
209 3nsz_A CK II alpha, casein kin 100.0 3.9E-40 1.3E-44 335.1 20.9 249 257-524 40-319 (330)
210 2xrw_A Mitogen-activated prote 100.0 4.5E-40 1.6E-44 340.4 21.6 249 257-525 29-319 (371)
211 3sv0_A Casein kinase I-like; t 100.0 4.9E-40 1.7E-44 350.0 22.4 253 257-532 11-279 (483)
212 3mi9_A Cell division protein k 100.0 4.8E-40 1.6E-44 337.6 21.6 255 257-525 21-312 (351)
213 3pg1_A Mitogen-activated prote 100.0 1.9E-40 6.5E-45 341.9 18.6 252 257-525 26-317 (362)
214 3an0_A Dual specificity mitoge 100.0 2.5E-40 8.4E-45 338.1 19.2 255 257-533 55-321 (340)
215 1j1b_A Glycogen synthase kinas 100.0 3.1E-40 1.1E-44 347.1 20.2 261 256-530 57-344 (420)
216 2fst_X Mitogen-activated prote 100.0 1.1E-40 3.8E-45 344.1 16.1 250 257-525 33-312 (367)
217 4e7w_A Glycogen synthase kinas 100.0 2.8E-40 9.5E-45 344.6 18.8 256 257-530 44-329 (394)
218 1phk_A Phosphorylase kinase; g 100.0 6.2E-40 2.1E-44 328.5 20.5 243 257-524 21-283 (298)
219 2x7f_A TRAF2 and NCK-interacti 100.0 7.1E-40 2.4E-44 332.5 21.2 242 257-524 28-286 (326)
220 2wtk_C Serine/threonine-protei 100.0 1.4E-39 4.8E-44 327.1 22.8 241 257-525 9-264 (305)
221 2wei_A Calmodulin-domain prote 100.0 2.6E-39 9E-44 322.4 24.6 242 257-524 26-276 (287)
222 2ycf_A Serine/threonine-protei 100.0 2.7E-40 9.3E-45 335.2 16.9 243 257-524 14-274 (322)
223 2pml_X PFPK7, Ser/Thr protein 100.0 3.3E-40 1.1E-44 338.1 17.6 253 257-524 35-322 (348)
224 1z57_A Dual specificity protei 100.0 1.1E-39 3.6E-44 332.5 20.8 254 257-524 18-328 (339)
225 1wak_A Serine/threonine-protei 100.0 3.4E-40 1.2E-44 343.9 16.8 258 257-524 41-391 (397)
226 2i6l_A Mitogen-activated prote 100.0 1.2E-39 4E-44 329.5 19.9 250 257-525 15-306 (320)
227 1blx_A Cyclin-dependent kinase 100.0 3.1E-39 1.1E-43 327.7 23.1 252 257-524 15-296 (326)
228 3qyz_A Mitogen-activated prote 100.0 1.6E-39 5.5E-44 335.4 20.9 253 257-525 31-314 (364)
229 4exu_A Mitogen-activated prote 100.0 9.9E-40 3.4E-44 337.8 19.2 249 257-525 46-324 (371)
230 3e3p_A Protein kinase, putativ 100.0 1.1E-39 3.7E-44 335.9 19.4 254 257-525 27-315 (360)
231 3fhr_A MAP kinase-activated pr 100.0 1.8E-39 6E-44 331.3 20.7 245 258-525 34-288 (336)
232 2vx3_A Dual specificity tyrosi 100.0 2.2E-39 7.5E-44 336.6 21.2 192 257-455 58-259 (382)
233 1zy4_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 322.0 23.0 241 257-524 10-283 (303)
234 3aln_A Dual specificity mitoge 100.0 1.3E-39 4.4E-44 331.0 17.4 251 257-525 26-286 (327)
235 3cek_A Dual specificity protei 100.0 3.5E-39 1.2E-43 325.7 20.3 242 257-526 32-294 (313)
236 2rio_A Serine/threonine-protei 100.0 1.5E-39 5.3E-44 343.3 18.4 244 258-524 20-295 (434)
237 2b9h_A MAP kinase FUS3, mitoge 100.0 2E-39 6.8E-44 333.0 18.6 252 257-524 15-305 (353)
238 3coi_A Mitogen-activated prote 100.0 2.9E-39 1E-43 332.0 18.6 247 257-525 28-306 (353)
239 3p23_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 339.0 20.2 239 257-524 28-283 (432)
240 2eu9_A Dual specificity protei 100.0 6.8E-39 2.3E-43 328.8 19.2 254 257-524 23-333 (355)
241 2dyl_A Dual specificity mitoge 100.0 1.6E-38 5.4E-43 321.2 20.8 244 257-525 29-284 (318)
242 1q8y_A SR protein kinase; tran 100.0 2.9E-39 9.8E-44 334.3 15.5 259 257-525 23-334 (373)
243 3a99_A Proto-oncogene serine/t 100.0 2E-39 6.8E-44 328.7 12.4 233 257-524 47-293 (320)
244 2iwi_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 325.1 13.2 234 257-525 35-284 (312)
245 3qa8_A MGC80376 protein; kinas 100.0 7.3E-39 2.5E-43 348.7 13.0 263 257-532 18-310 (676)
246 2pzi_A Probable serine/threoni 100.0 2.6E-38 8.8E-43 352.5 17.2 235 257-530 84-327 (681)
247 3uqc_A Probable conserved tran 100.0 9.9E-38 3.4E-42 310.9 18.9 229 257-533 35-267 (286)
248 3m2w_A MAP kinase-activated pr 100.0 5.5E-37 1.9E-41 307.6 18.8 224 258-525 23-257 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 4.6E-37 1.6E-41 322.3 14.3 237 258-524 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.7E-37 6E-42 316.5 10.4 238 256-523 23-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 6E-32 2E-36 293.5 7.5 183 259-454 240-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.7E-28 1.3E-32 262.2 7.7 178 258-455 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.3E-24 7.7E-29 213.6 5.8 141 257-427 94-252 (282)
254 3rgz_A Protein brassinosteroid 99.8 1.4E-20 4.9E-25 212.3 10.1 114 39-153 633-750 (768)
255 1zth_A RIO1 serine protein kin 99.8 3.4E-20 1.2E-24 181.2 9.9 134 257-408 51-219 (258)
256 1ogq_A PGIP-2, polygalacturona 99.7 4E-18 1.4E-22 171.4 8.7 140 11-151 144-312 (313)
257 3m19_A Variable lymphocyte rec 99.7 6.6E-17 2.3E-21 157.1 15.8 143 2-145 45-194 (251)
258 2v70_A SLIT-2, SLIT homolog 2 99.7 1.2E-16 4.1E-21 152.1 13.0 142 2-147 21-170 (220)
259 3e6j_A Variable lymphocyte rec 99.7 2.2E-16 7.7E-21 151.1 14.5 140 2-146 29-175 (229)
260 2v9t_B SLIT homolog 2 protein 99.7 2.6E-16 8.8E-21 149.7 13.1 140 3-146 22-168 (220)
261 2o6q_A Variable lymphocyte rec 99.7 6.8E-16 2.3E-20 151.6 16.0 126 3-129 48-177 (270)
262 4gyi_A RIO2 kinase; protein ki 99.7 1.1E-17 3.7E-22 170.2 3.1 135 256-407 98-264 (397)
263 2v9t_B SLIT homolog 2 protein 99.7 3.2E-16 1.1E-20 149.1 12.1 122 2-124 42-167 (220)
264 2v70_A SLIT-2, SLIT homolog 2 99.7 2.9E-16 1E-20 149.3 11.3 123 3-126 43-170 (220)
265 3rgz_A Protein brassinosteroid 99.7 2.1E-16 7.2E-21 178.3 11.7 80 62-141 631-715 (768)
266 3rfs_A Internalin B, repeat mo 99.7 1.3E-15 4.4E-20 149.8 15.8 135 11-146 80-221 (272)
267 2xot_A Amphoterin-induced prot 99.7 1.2E-16 4E-21 164.0 8.5 144 2-146 49-205 (361)
268 1w8a_A SLIT protein; signaling 99.7 1.1E-15 3.6E-20 142.2 14.0 121 2-126 18-143 (192)
269 1p9a_G Platelet glycoprotein I 99.6 8.2E-16 2.8E-20 152.7 13.7 126 2-129 41-168 (290)
270 1w8a_A SLIT protein; signaling 99.6 1.4E-15 4.7E-20 141.4 12.2 129 18-147 10-143 (192)
271 1ozn_A Reticulon 4 receptor; N 99.6 1E-15 3.6E-20 151.4 11.8 129 3-132 67-200 (285)
272 1ogq_A PGIP-2, polygalacturona 99.6 4.1E-16 1.4E-20 156.7 8.4 126 6-133 67-198 (313)
273 2o6s_A Variable lymphocyte rec 99.6 3.3E-15 1.1E-19 140.6 14.0 140 4-147 19-165 (208)
274 2o6s_A Variable lymphocyte rec 99.6 6.9E-15 2.3E-19 138.4 15.5 125 2-127 38-166 (208)
275 3m19_A Variable lymphocyte rec 99.6 3.9E-15 1.3E-19 144.5 14.0 123 2-125 69-195 (251)
276 3e6j_A Variable lymphocyte rec 99.6 4.6E-15 1.6E-19 142.0 12.9 123 2-126 50-176 (229)
277 4fcg_A Uncharacterized protein 99.6 2.5E-15 8.5E-20 152.0 11.4 143 2-148 137-295 (328)
278 3rfs_A Internalin B, repeat mo 99.6 6.5E-15 2.2E-19 144.8 14.0 125 2-127 95-223 (272)
279 2o6q_A Variable lymphocyte rec 99.6 9.7E-15 3.3E-19 143.3 14.9 109 17-126 38-150 (270)
280 2z66_A Variable lymphocyte rec 99.6 5.3E-15 1.8E-19 147.9 11.3 135 10-145 120-263 (306)
281 4g8a_A TOLL-like receptor 4; l 99.6 4.7E-15 1.6E-19 163.1 11.6 144 4-147 433-584 (635)
282 4g8a_A TOLL-like receptor 4; l 99.6 4.9E-15 1.7E-19 163.0 11.7 126 3-129 63-193 (635)
283 2wfh_A SLIT homolog 2 protein 99.6 1.1E-14 3.8E-19 135.3 12.1 127 18-147 12-143 (193)
284 2wfh_A SLIT homolog 2 protein 99.6 1.4E-14 4.9E-19 134.6 12.9 120 2-125 20-142 (193)
285 4fcg_A Uncharacterized protein 99.6 1.4E-14 4.8E-19 146.4 13.6 144 2-147 114-270 (328)
286 2o6r_A Variable lymphocyte rec 99.6 1.4E-14 4.8E-19 132.6 12.0 125 19-145 10-139 (177)
287 3zyi_A Leucine-rich repeat-con 99.6 1.7E-14 5.7E-19 152.6 13.6 105 40-147 198-307 (452)
288 1ozn_A Reticulon 4 receptor; N 99.6 2.7E-14 9.2E-19 141.2 13.7 122 5-127 45-171 (285)
289 4glp_A Monocyte differentiatio 99.6 5.4E-15 1.9E-19 148.2 8.7 138 3-142 156-306 (310)
290 2z62_A TOLL-like receptor 4, v 99.5 1.6E-14 5.5E-19 142.1 12.0 145 2-147 62-241 (276)
291 3vq2_A TLR4, TOLL-like recepto 99.5 9.3E-15 3.2E-19 160.3 10.5 138 10-148 418-563 (606)
292 3zyj_A Leucine-rich repeat-con 99.5 2.3E-14 7.8E-19 151.0 12.9 143 2-147 122-296 (440)
293 3oja_B Anopheles plasmodium-re 99.5 1.9E-14 6.6E-19 157.6 11.4 138 2-140 61-202 (597)
294 2o6r_A Variable lymphocyte rec 99.5 6.8E-14 2.3E-18 128.0 13.1 120 3-126 18-141 (177)
295 3g39_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 128.5 11.6 108 17-126 10-119 (170)
296 1p9a_G Platelet glycoprotein I 99.5 5.7E-14 2E-18 139.3 13.3 141 2-146 65-211 (290)
297 2z62_A TOLL-like receptor 4, v 99.5 1.8E-14 6.2E-19 141.8 9.5 114 17-131 29-147 (276)
298 3v47_A TOLL-like receptor 5B a 99.5 4.5E-14 1.5E-18 149.2 12.6 133 15-148 274-413 (455)
299 4eco_A Uncharacterized protein 99.5 9.2E-15 3.2E-19 161.2 5.8 135 2-141 194-364 (636)
300 1wwl_A Monocyte differentiatio 99.5 3.1E-14 1E-18 142.9 9.1 124 16-140 149-284 (312)
301 2id5_A Lingo-1, leucine rich r 99.5 4.7E-14 1.6E-18 150.1 11.0 126 3-129 43-172 (477)
302 3v47_A TOLL-like receptor 5B a 99.5 9.1E-14 3.1E-18 146.8 13.1 118 8-126 291-412 (455)
303 3j0a_A TOLL-like receptor 5; m 99.5 1.8E-14 6.1E-19 164.2 7.9 136 12-147 422-564 (844)
304 3o6n_A APL1; leucine-rich repe 99.5 7E-14 2.4E-18 144.7 11.5 137 3-140 56-196 (390)
305 2xot_A Amphoterin-induced prot 99.5 8.4E-14 2.9E-18 142.7 11.9 136 3-142 29-175 (361)
306 4ezg_A Putative uncharacterize 99.5 5.3E-14 1.8E-18 131.2 9.4 110 12-123 62-173 (197)
307 2r9u_A Variable lymphocyte rec 99.5 1.3E-13 4.4E-18 125.8 11.6 104 18-123 14-119 (174)
308 2id5_A Lingo-1, leucine rich r 99.5 6.4E-14 2.2E-18 149.1 10.8 142 4-146 164-336 (477)
309 3zyi_A Leucine-rich repeat-con 99.5 1.6E-13 5.5E-18 145.0 13.1 120 2-122 85-209 (452)
310 3zyj_A Leucine-rich repeat-con 99.5 2E-13 6.9E-18 143.7 13.7 120 2-122 74-198 (440)
311 3oja_A Leucine-rich immune mol 99.5 4.1E-14 1.4E-18 150.8 8.5 138 2-141 44-225 (487)
312 1ziw_A TOLL-like receptor 3; i 99.5 1.3E-13 4.6E-18 153.2 12.9 141 5-147 470-626 (680)
313 2z80_A TOLL-like receptor 2, v 99.5 9.7E-14 3.3E-18 141.7 10.6 127 3-133 42-174 (353)
314 1xku_A Decorin; proteoglycan, 99.5 2.8E-13 9.6E-18 136.9 13.6 123 2-129 131-259 (330)
315 2z63_A TOLL-like receptor 4, v 99.5 1.1E-13 3.8E-18 150.4 11.5 142 5-148 386-536 (570)
316 2xwt_C Thyrotropin receptor; s 99.5 8.5E-14 2.9E-18 133.9 9.1 135 4-142 68-217 (239)
317 2z66_A Variable lymphocyte rec 99.5 7.9E-14 2.7E-18 139.3 8.9 144 3-147 137-291 (306)
318 3oja_B Anopheles plasmodium-re 99.5 1.8E-13 6.3E-18 149.8 12.3 100 2-102 85-186 (597)
319 3t6q_A CD180 antigen; protein- 99.5 1.2E-13 4E-18 151.5 10.6 128 5-133 389-524 (606)
320 4b8c_D Glucose-repressible alc 99.5 5.5E-14 1.9E-18 156.9 8.0 121 7-131 215-338 (727)
321 3vq2_A TLR4, TOLL-like recepto 99.5 2E-13 6.7E-18 149.7 12.2 123 6-129 46-173 (606)
322 4ecn_A Leucine-rich repeat pro 99.5 4.5E-14 1.6E-18 159.4 7.1 131 7-142 440-607 (876)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 2.7E-13 9.1E-18 147.4 12.9 134 10-146 371-513 (562)
324 3t6q_A CD180 antigen; protein- 99.4 1.6E-13 5.6E-18 150.4 11.1 131 2-133 43-177 (606)
325 3oja_A Leucine-rich immune mol 99.4 7.1E-14 2.4E-18 149.0 7.6 129 14-145 118-252 (487)
326 2ell_A Acidic leucine-rich nuc 99.4 2.1E-13 7.1E-18 123.6 9.6 117 14-133 22-147 (168)
327 2ell_A Acidic leucine-rich nuc 99.4 1.3E-13 4.4E-18 125.0 8.0 116 5-123 39-161 (168)
328 1ziw_A TOLL-like receptor 3; i 99.4 1.9E-13 6.5E-18 152.0 10.9 125 3-128 36-164 (680)
329 2z81_A CD282 antigen, TOLL-lik 99.4 1.9E-13 6.6E-18 147.9 10.4 110 16-126 26-140 (549)
330 2xwt_C Thyrotropin receptor; s 99.4 2.1E-13 7.1E-18 131.2 9.1 124 16-141 31-167 (239)
331 4eco_A Uncharacterized protein 99.4 4.5E-13 1.5E-17 147.7 13.0 86 39-127 489-583 (636)
332 2je0_A Acidic leucine-rich nuc 99.4 9.8E-14 3.3E-18 123.1 6.2 110 14-126 15-130 (149)
333 2z7x_B TOLL-like receptor 1, v 99.4 1.9E-13 6.5E-18 147.0 9.7 114 13-128 321-439 (520)
334 1wwl_A Monocyte differentiatio 99.4 1.1E-13 3.6E-18 138.9 6.8 107 14-122 93-214 (312)
335 2ft3_A Biglycan; proteoglycan, 99.4 5.4E-13 1.8E-17 134.9 11.7 123 2-129 133-260 (332)
336 2je0_A Acidic leucine-rich nuc 99.4 1.4E-13 4.6E-18 122.2 6.0 111 5-118 32-149 (149)
337 1xku_A Decorin; proteoglycan, 99.4 1.3E-12 4.4E-17 132.0 13.7 117 2-122 62-184 (330)
338 2z63_A TOLL-like receptor 4, v 99.4 3.3E-13 1.1E-17 146.6 10.0 122 6-128 42-168 (570)
339 2ft3_A Biglycan; proteoglycan, 99.4 9.5E-13 3.2E-17 133.1 12.5 135 2-141 64-204 (332)
340 4ezg_A Putative uncharacterize 99.4 6E-13 2.1E-17 124.0 9.7 111 11-123 83-195 (197)
341 3o53_A Protein LRIM1, AGAP0063 99.4 2.9E-13 9.8E-18 136.1 8.1 123 2-124 44-206 (317)
342 1dce_A Protein (RAB geranylger 99.4 6.4E-13 2.2E-17 143.9 11.0 105 17-126 442-550 (567)
343 3g39_A Variable lymphocyte rec 99.4 9.5E-13 3.2E-17 119.6 10.1 100 2-105 19-120 (170)
344 2z81_A CD282 antigen, TOLL-lik 99.4 8E-13 2.7E-17 143.1 11.3 131 12-146 357-513 (549)
345 2r9u_A Variable lymphocyte rec 99.4 9.8E-13 3.3E-17 120.0 10.0 99 2-104 22-122 (174)
346 3o6n_A APL1; leucine-rich repe 99.4 1.3E-12 4.3E-17 135.2 12.2 120 2-123 79-200 (390)
347 3j0a_A TOLL-like receptor 5; m 99.4 1.3E-12 4.3E-17 148.9 12.9 108 16-123 24-137 (844)
348 1h6u_A Internalin H; cell adhe 99.4 1.6E-12 5.4E-17 130.1 11.4 112 5-124 54-166 (308)
349 4ecn_A Leucine-rich repeat pro 99.4 2.1E-12 7.1E-17 145.9 13.5 120 6-128 687-824 (876)
350 4glp_A Monocyte differentiatio 99.4 3.1E-13 1.1E-17 135.4 6.1 116 13-129 114-244 (310)
351 1a9n_A U2A', U2A'; complex (nu 99.4 7.4E-13 2.5E-17 121.0 7.5 112 11-127 14-130 (176)
352 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 1.4E-12 4.9E-17 141.6 11.0 104 16-123 52-160 (562)
353 2z7x_B TOLL-like receptor 1, v 99.4 8.6E-13 2.9E-17 141.9 9.0 103 16-122 21-128 (520)
354 1h6t_A Internalin B; cell adhe 99.4 1.4E-12 4.9E-17 129.3 9.7 128 3-141 57-189 (291)
355 1h6u_A Internalin H; cell adhe 99.4 1.2E-12 4E-17 131.0 9.0 133 2-142 73-207 (308)
356 4b8c_D Glucose-repressible alc 99.3 1.2E-13 4E-18 154.3 1.7 127 2-133 234-365 (727)
357 1xeu_A Internalin C; cellular 99.3 3.3E-12 1.1E-16 124.7 11.4 105 12-123 37-142 (263)
358 1xeu_A Internalin C; cellular 99.3 2.1E-12 7.3E-17 126.0 10.1 132 2-144 51-186 (263)
359 1a9n_A U2A', U2A'; complex (nu 99.3 7E-13 2.4E-17 121.1 5.6 115 3-122 30-153 (176)
360 2z80_A TOLL-like receptor 2, v 99.3 3.9E-12 1.3E-16 129.7 11.6 105 16-122 31-137 (353)
361 3o53_A Protein LRIM1, AGAP0063 99.3 1.4E-12 4.8E-17 131.0 7.9 129 14-145 118-252 (317)
362 1h6t_A Internalin B; cell adhe 99.3 4.4E-12 1.5E-16 125.8 10.8 106 13-124 43-149 (291)
363 1m9s_A Internalin B; cell inva 99.3 3.4E-12 1.2E-16 139.1 10.8 129 3-141 54-186 (605)
364 1dce_A Protein (RAB geranylger 99.3 3E-12 1E-16 138.6 10.0 110 2-116 451-567 (567)
365 2ifg_A High affinity nerve gro 99.3 4.9E-12 1.7E-16 128.6 10.6 104 19-124 11-118 (347)
366 3cvr_A Invasion plasmid antige 99.3 1.5E-11 5E-16 132.8 13.0 118 5-140 72-190 (571)
367 3tm0_A Aminoglycoside 3'-phosp 99.3 7.7E-12 2.6E-16 121.9 9.9 137 259-406 20-212 (263)
368 3cvr_A Invasion plasmid antige 99.3 1.5E-11 5.3E-16 132.6 13.1 112 17-141 60-171 (571)
369 4fmz_A Internalin; leucine ric 99.3 7.1E-12 2.4E-16 127.3 9.4 133 4-144 189-325 (347)
370 3bz5_A Internalin-J, INLJ; leu 99.3 9E-12 3.1E-16 131.6 10.2 127 3-141 160-297 (457)
371 4fmz_A Internalin; leucine ric 99.3 5.8E-12 2E-16 128.0 8.3 125 12-141 217-344 (347)
372 1m9s_A Internalin B; cell inva 99.3 1.3E-11 4.5E-16 134.5 11.5 130 2-141 75-208 (605)
373 1o6v_A Internalin A; bacterial 99.2 1.5E-11 5.2E-16 130.3 10.3 133 4-143 255-388 (466)
374 3bz5_A Internalin-J, INLJ; leu 99.2 5.5E-11 1.9E-15 125.5 14.2 104 12-123 123-226 (457)
375 1o6v_A Internalin A; bacterial 99.2 2.3E-11 8E-16 128.8 11.2 126 11-143 238-366 (466)
376 2ifg_A High affinity nerve gro 99.2 1.8E-11 6.1E-16 124.5 9.5 97 3-103 20-119 (347)
377 1ds9_A Outer arm dynein; leuci 99.2 7.5E-14 2.6E-18 130.2 -7.8 112 11-127 43-158 (198)
378 1jl5_A Outer protein YOPM; leu 99.2 8.8E-11 3E-15 123.9 13.9 100 16-126 131-231 (454)
379 4ay9_X Follicle-stimulating ho 99.1 8.4E-11 2.9E-15 119.7 9.7 137 2-141 90-234 (350)
380 1nd4_A Aminoglycoside 3'-phosp 99.1 7.5E-11 2.6E-15 114.4 8.3 132 260-407 26-214 (264)
381 1jl5_A Outer protein YOPM; leu 99.1 5.2E-10 1.8E-14 118.0 13.8 98 15-123 90-187 (454)
382 3g06_A SSPH2 (leucine-rich rep 99.1 4.4E-10 1.5E-14 122.7 13.4 121 3-140 51-171 (622)
383 3g06_A SSPH2 (leucine-rich rep 99.1 5.7E-10 1.9E-14 121.8 14.2 90 39-140 182-271 (622)
384 4ay9_X Follicle-stimulating ho 99.1 1.4E-10 4.8E-15 118.0 8.3 127 3-132 20-152 (350)
385 3goz_A Leucine-rich repeat-con 99.0 8.9E-11 3.1E-15 120.1 2.9 138 2-141 9-178 (362)
386 3dxp_A Putative acyl-COA dehyd 99.0 7.3E-10 2.5E-14 113.1 8.8 142 259-408 44-249 (359)
387 1ds9_A Outer arm dynein; leuci 99.0 2E-12 6.9E-17 120.5 -9.8 125 12-141 14-151 (198)
388 3goz_A Leucine-rich repeat-con 99.0 1E-10 3.6E-15 119.6 1.5 125 3-127 33-185 (362)
389 2ca6_A RAN GTPase-activating p 99.0 3.4E-11 1.2E-15 124.3 -2.4 114 11-124 117-259 (386)
390 3sg8_A APH(2'')-ID; antibiotic 98.9 4.6E-10 1.6E-14 111.8 5.6 182 259-455 26-288 (304)
391 2ca6_A RAN GTPase-activating p 98.9 8.5E-11 2.9E-15 121.3 -0.6 128 16-143 159-316 (386)
392 2ast_B S-phase kinase-associat 98.9 1.7E-10 6E-15 116.4 0.9 114 10-124 62-184 (336)
393 2ast_B S-phase kinase-associat 98.9 1.2E-10 3.9E-15 117.7 -0.7 129 12-141 89-233 (336)
394 3sb4_A Hypothetical leucine ri 98.9 4.2E-09 1.4E-13 106.1 10.2 92 39-133 227-321 (329)
395 1z7x_W Ribonuclease inhibitor; 98.7 9E-10 3.1E-14 116.2 -3.2 132 10-141 250-409 (461)
396 3r70_A Aminoglycoside phosphot 98.6 2.5E-07 8.7E-12 92.6 11.9 134 258-408 42-238 (320)
397 1z7x_W Ribonuclease inhibitor; 98.6 2.8E-09 9.6E-14 112.4 -3.1 114 12-125 24-158 (461)
398 3d1u_A Putative fructosamine-3 98.6 2.1E-07 7.2E-12 91.6 10.5 75 258-336 20-97 (288)
399 3sb4_A Hypothetical leucine ri 98.4 3.5E-07 1.2E-11 91.9 8.8 63 6-70 83-155 (329)
400 3rw6_A Nuclear RNA export fact 98.4 1.2E-08 4.1E-13 98.7 -2.0 84 43-127 148-238 (267)
401 3un9_A NLR family member X1; l 98.4 6.7E-09 2.3E-13 106.3 -5.7 107 16-123 101-225 (372)
402 3un9_A NLR family member X1; l 98.4 2.3E-08 7.9E-13 102.3 -2.0 110 14-124 124-254 (372)
403 3tdw_A Gentamicin resistance p 98.4 2.5E-06 8.6E-11 84.7 12.6 136 259-407 25-224 (306)
404 4gkh_A Aminoglycoside 3'-phosp 98.3 2.5E-06 8.7E-11 82.8 11.5 136 260-407 31-223 (272)
405 3rw6_A Nuclear RNA export fact 98.3 1.7E-07 5.8E-12 90.6 2.2 75 38-115 170-257 (267)
406 3ovc_A Hygromycin-B 4-O-kinase 98.2 2.9E-06 9.8E-11 86.4 9.3 73 258-336 46-121 (362)
407 3ogk_B Coronatine-insensitive 98.2 1.9E-07 6.5E-12 101.5 0.1 128 13-141 375-524 (592)
408 3ats_A Putative uncharacterize 98.1 2E-06 6.9E-11 87.2 5.4 79 259-337 26-121 (357)
409 1io0_A Tropomodulin; LRR prote 98.1 3.7E-07 1.3E-11 83.6 -0.1 111 11-122 31-164 (185)
410 4fdw_A Leucine rich hypothetic 98.1 1E-05 3.6E-10 83.4 10.4 112 6-122 170-284 (401)
411 4fdw_A Leucine rich hypothetic 98.0 1.4E-05 4.9E-10 82.3 10.2 78 39-119 249-333 (401)
412 3ogk_B Coronatine-insensitive 98.0 2.7E-07 9.1E-12 100.4 -3.8 114 14-129 110-239 (592)
413 2olc_A MTR kinase, methylthior 98.0 3.3E-05 1.1E-09 79.5 11.2 75 258-334 35-120 (397)
414 2q83_A YTAA protein; 2635576, 97.9 5.4E-05 1.8E-09 75.9 11.4 143 259-406 38-251 (346)
415 3f7w_A Putative fructosamine-3 97.8 0.00014 4.8E-09 71.2 12.2 73 259-335 21-96 (288)
416 2p1m_B Transport inhibitor res 97.7 4.2E-06 1.4E-10 90.8 0.1 125 14-140 370-516 (594)
417 2p1m_B Transport inhibitor res 97.6 1.6E-05 5.5E-10 86.2 2.9 111 10-120 60-195 (594)
418 3jr1_A Putative fructosamine-3 97.6 0.00019 6.5E-09 71.1 10.3 74 259-336 42-118 (312)
419 2pyw_A Uncharacterized protein 97.5 0.00049 1.7E-08 71.3 11.5 74 377-451 232-313 (420)
420 1io0_A Tropomodulin; LRR prote 97.5 2E-05 6.8E-10 71.9 0.3 89 11-100 60-164 (185)
421 3rfe_A Platelet glycoprotein I 97.4 0.00018 6E-09 61.4 5.8 57 41-100 11-68 (130)
422 2ra8_A Uncharacterized protein 97.4 5.9E-05 2E-09 76.4 2.9 110 12-123 168-293 (362)
423 2ra8_A Uncharacterized protein 97.3 5.1E-05 1.8E-09 76.9 1.7 107 15-122 192-320 (362)
424 3rfe_A Platelet glycoprotein I 97.3 0.00033 1.1E-08 59.7 5.9 56 20-76 12-68 (130)
425 1zyl_A Hypothetical protein YI 97.2 0.0017 5.8E-08 64.5 11.5 144 260-407 33-223 (328)
426 2ppq_A HSK, HK, homoserine kin 97.2 0.0015 5.1E-08 64.7 10.9 145 259-406 28-216 (322)
427 4gt6_A Cell surface protein; l 97.1 0.0017 5.8E-08 66.5 10.2 112 5-121 254-369 (394)
428 3csv_A Aminoglycoside phosphot 97.0 0.0039 1.3E-07 62.1 11.3 144 259-407 24-217 (333)
429 3dxq_A Choline/ethanolamine ki 96.9 0.0033 1.1E-07 61.7 10.1 140 259-407 24-202 (301)
430 4gt6_A Cell surface protein; l 96.9 0.0015 5.1E-08 66.9 7.6 112 5-121 277-390 (394)
431 1nw1_A Choline kinase (49.2 KD 96.8 0.005 1.7E-07 63.8 10.6 70 259-334 79-157 (429)
432 4h09_A Hypothetical leucine ri 96.7 0.0062 2.1E-07 61.8 10.5 56 39-96 264-319 (379)
433 4fs7_A Uncharacterized protein 96.5 0.0056 1.9E-07 62.6 8.6 24 6-29 243-266 (394)
434 3feg_A Choline/ethanolamine ki 96.4 0.01 3.5E-07 60.2 9.9 143 259-406 56-253 (379)
435 3c5i_A Choline kinase; choline 96.4 0.0024 8.3E-08 64.7 5.0 72 259-335 39-120 (369)
436 2qg7_A Ethanolamine kinase PV0 96.4 0.027 9.2E-07 58.6 12.9 73 259-336 114-188 (458)
437 3e4g_A ATP synthase subunit S, 96.3 0.0012 4E-08 59.2 1.7 84 36-120 59-150 (176)
438 2yle_A Protein spire homolog 1 96.3 0.081 2.8E-06 48.6 13.8 103 334-453 33-135 (229)
439 4fs7_A Uncharacterized protein 96.2 0.006 2.1E-07 62.3 6.7 108 6-119 266-376 (394)
440 3e4g_A ATP synthase subunit S, 96.0 0.0025 8.7E-08 56.9 2.5 91 6-98 52-150 (176)
441 4h09_A Hypothetical leucine ri 95.9 0.012 4E-07 59.7 7.3 88 7-97 254-343 (379)
442 3i1a_A Spectinomycin phosphotr 95.7 0.03 1E-06 55.9 9.0 31 377-407 206-236 (339)
443 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0018 6.3E-08 59.0 -0.1 84 14-97 39-136 (197)
444 3f2s_A CK, chetk-alpha, cholin 94.6 0.14 4.7E-06 52.1 10.2 144 259-406 58-279 (401)
445 3mes_A Choline kinase; malaria 94.1 0.15 5.2E-06 52.3 9.2 143 259-407 76-291 (424)
446 1pgv_A TMD-1, tropomodulin TMD 92.7 0.031 1E-06 50.8 1.2 89 11-99 65-169 (197)
447 4ann_A ESSB; membrane protein, 90.2 0.5 1.7E-05 43.2 6.5 120 306-460 42-163 (215)
448 3cxl_A N-chimerin; SH2, RHO-GA 85.5 0.12 4.2E-06 53.7 -0.9 59 259-320 148-215 (463)
449 4ano_A ESSB; membrane protein, 84.1 3 0.0001 38.2 7.9 115 307-457 48-165 (219)
450 2lz0_A Uncharacterized protein 74.9 3.2 0.00011 32.8 4.3 48 48-97 6-53 (100)
451 3g15_A CK, chetk-alpha, cholin 57.4 7.4 0.00025 39.2 4.0 30 378-407 245-280 (401)
452 2ks1_B Epidermal growth factor 51.2 4.2 0.00014 26.7 0.6 9 179-187 32-40 (44)
453 3ls8_A Phosphatidylinositol 3- 47.2 2.5E+02 0.0084 29.8 13.6 46 352-405 453-500 (614)
454 2l2t_A Receptor tyrosine-prote 45.7 4.4 0.00015 26.6 0.0 10 178-187 30-39 (44)
455 2lz0_A Uncharacterized protein 37.2 50 0.0017 25.7 5.0 21 53-73 33-53 (100)
456 2x6h_A GH13170P, VPS34, phosph 35.7 1E+02 0.0035 33.3 8.6 45 354-406 529-575 (696)
457 1cja_A Protein (actin-fragmin 23.6 2.8E+02 0.0096 26.9 8.6 132 263-408 78-238 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.5e-57 Score=450.90 Aligned_cols=253 Identities=20% Similarity=0.333 Sum_probs=207.2
Q ss_pred ccceecccCceeEEEEEEe------CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 4578999999999999864 4678999999876566677899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 331 VPNGSLANLLHVRR--------APGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 331 ~~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
|++|+|.++|+..+ ......++|..++.++.|||.||+|||++ +||||||||+|||+++++.+||+||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ----HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCccCHhhEEECCCCcEEECCc
Confidence 99999999998643 11223599999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHh
Q 008431 403 ALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 403 Gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
|+|+..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...+.+....
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--------~~~~~~~~i~ 244 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--------SNNEVIECIT 244 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHH
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--------CHHHHHHHHH
Confidence 999865432 12357899999999999999999999999999999999 99999732 2222222222
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
.+.... . +......+.+++.+||+.||++||||+||++.|+++...
T Consensus 245 -~~~~~~-----~-----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 245 -QGRVLQ-----R-----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp -HTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -cCCCCC-----C-----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 221110 0 112234688899999999999999999999999998654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-56 Score=454.14 Aligned_cols=254 Identities=19% Similarity=0.314 Sum_probs=205.0
Q ss_pred ccceecccCceeEEEEEEe------CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..++||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4578999999999999864 4778999999876666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEe
Q 008431 331 VPNGSLANLLHVRRAP----------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLT 400 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~ 400 (565)
|++|+|.++++..... ....++|..++.|+.|||.||+|||+. +||||||||+|||+++++.+||+
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL----HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTTEEEEC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC----CeecccccHhhEEECCCCcEEEc
Confidence 9999999999865421 123599999999999999999999998 99999999999999999999999
Q ss_pred ccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHH
Q 008431 401 DYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNS 473 (565)
Q Consensus 401 DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 473 (565)
|||+++..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...+.+..
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~--------~~~~~~~~ 272 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL--------SNTEAIDC 272 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS--------CHHHHHHH
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC--------CHHHHHHH
Confidence 99999865432 23468899999999999999999999999999999999 89999632 22222222
Q ss_pred HhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 474 VVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 474 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. .+... .. +......+.+++.+||+.||++||||.||+++|+.+.+..
T Consensus 273 i~-~g~~~-----~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 273 IT-QGREL-----ER-----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HH-HTCCC-----CC-----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HH-cCCCC-----CC-----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 22 22110 11 1122346788999999999999999999999999997653
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-56 Score=448.65 Aligned_cols=250 Identities=20% Similarity=0.328 Sum_probs=204.5
Q ss_pred ccceecccCceeEEEEEEe------CCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||+||+|.+. +++.||||+++.. .....++|.+|+.+|++++|||||+++|+|.+.+..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 3478999999999999863 5678999999753 33446789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcE
Q 008431 330 FVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL 398 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~k 398 (565)
||++|||.++|....... ...++|..++.|+.|||.||+|||+. +||||||||+|||+++++.+|
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~----~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH----HVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC----CCCCCCccccceEECCCCCEE
Confidence 999999999997643211 13599999999999999999999998 999999999999999999999
Q ss_pred EeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHH
Q 008431 399 LTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWV 471 (565)
Q Consensus 399 l~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 471 (565)
|+|||+++..... ....||+.|||||++.+..|+.++|||||||+||||+| |+.||... ...+.+
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--------~~~~~~ 257 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--------SNQDVV 257 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--------CHHHHH
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--------CHHHHH
Confidence 9999999876432 23467899999999999999999999999999999999 89999632 222222
Q ss_pred HHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHh
Q 008431 472 NSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMEL 529 (565)
Q Consensus 472 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 529 (565)
.. +..+.... .+......+.+++.+||+.||++||||.||++.|+.+
T Consensus 258 ~~-i~~~~~~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 258 EM-IRNRQVLP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HH-HHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HH-HHcCCCCC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22 22221110 1122334688899999999999999999999999865
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-56 Score=444.94 Aligned_cols=251 Identities=22% Similarity=0.341 Sum_probs=199.7
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|++. ..||||+++... ....++|.+|+.+|++++|||||+++|+|. ++..|||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 4578999999999999854 369999987432 334568999999999999999999999875 46789999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.++|+.... .++|..++.|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 117 sL~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~~----~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 117 SLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp BHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999976543 499999999999999999999998 9999999999999999999999999999876432
Q ss_pred ---ccccccccccCCCccCC---CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 412 ---HAQLHMVAYKSPEFNQT---DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~---~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
....||+.|||||++.+ ..|+.++|||||||+||||+||+.||... .....+...+..+. ..
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~--------~~~~~~~~~~~~~~----~~ 256 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI--------NNRDQIIFMVGRGY----AS 256 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTC--------CCHHHHHHHHHTTC----CC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCC--------ChHHHHHHHHhcCC----CC
Confidence 23478999999998753 46999999999999999999999999631 12222222222221 12
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
|.+... +......+.+++.+||+.||++||||.||++.|+.++..
T Consensus 257 p~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 257 PDLSKL--YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCSTTS--CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCcccc--cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 222111 112334688899999999999999999999999988643
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.2e-55 Score=437.94 Aligned_cols=264 Identities=20% Similarity=0.236 Sum_probs=200.6
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecC----ceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE----EKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|++ +|+.||||++..... ....+..|+..+.+++|||||+++|+|.+++ ..|||||||+
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~ 84 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC
Confidence 357899999999999987 689999999864321 1222345666678899999999999998764 4799999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----CCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF----PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
+|+|.++++.. .++|..+.+++.|+|.||+|||+++ +.++||||||||+|||++.++++||+|||+|+..
T Consensus 85 ~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 85 HGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999753 3899999999999999999999762 2347999999999999999999999999999876
Q ss_pred cccc--------cccccccccCCCccCCC------CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCC------cchH
Q 008431 409 NKEH--------AQLHMVAYKSPEFNQTD------GVTRKTDVWSLGILILELLTGKFPANYLAQGKGAN------ADLA 468 (565)
Q Consensus 409 ~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~------~~~~ 468 (565)
.... ...||+.|||||++.+. .|+.++|||||||++|||+||++||.......... ....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 4321 23689999999988654 36789999999999999999998875322111000 0011
Q ss_pred HHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 469 TWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 469 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+...... +.++|.+.......+....+.+++.+||+.||++||||.||++.|+++.+.
T Consensus 239 ~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 239 EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 122222211 222333332222345667889999999999999999999999999998754
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.6e-54 Score=438.02 Aligned_cols=241 Identities=18% Similarity=0.259 Sum_probs=202.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||+++++|.+++..|||||||++|+
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 346899999999999996 4799999999986555667789999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 158 L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 227 (346)
T 4fih_A 158 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 227 (346)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred HHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc
Confidence 99999753 389999999999999999999999 9999999999999999999999999999876433
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
.+.+||+.|||||++.+..|+.++|||||||++|||++|++||.. .+..+.+.... .... +.+.
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--------~~~~~~~~~i~-~~~~-----~~~~-- 291 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--------EPPLKAMKMIR-DNLP-----PRLK-- 291 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHH-HSSC-----CCCS--
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHH-cCCC-----CCCC--
Confidence 356799999999999999999999999999999999999999962 12222222222 1111 1111
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
........+.+++.+||+.||++|||+.|+++
T Consensus 292 -~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01112246788899999999999999999865
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-54 Score=426.56 Aligned_cols=242 Identities=20% Similarity=0.353 Sum_probs=193.7
Q ss_pred cceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEe----cCceEEEEec
Q 008431 258 AEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR----KEEKLLVSDF 330 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~E~ 330 (565)
.++||+|+||+||+|.. .++..||+|++... .....+.|.+|+++|++++|||||+++++|.+ ++..||||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 35799999999999995 46889999999743 23345679999999999999999999999875 3457999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC-CCCcEEeccCCccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN-AYEPLLTDYALVPIVN 409 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DfGla~~~~ 409 (565)
|++|+|.+++.... .+++..+..++.||+.||+|||++.+ +||||||||+|||++. ++.+||+|||+|+...
T Consensus 111 ~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~~--~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRTP--PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSSS--CCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCC--CEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999998654 39999999999999999999999821 3999999999999984 7899999999998654
Q ss_pred cc--ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 410 KE--HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 410 ~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.. .+.+||+.|||||++.+ .|+.++|||||||++|||+||+.||... ......... +..+.....++
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~-------~~~~~~~~~-i~~~~~~~~~~-- 252 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYRR-VTSGVKPASFD-- 252 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHHH-HTTTCCCGGGG--
T ss_pred CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC-------CcHHHHHHH-HHcCCCCCCCC--
Confidence 43 34579999999998865 6999999999999999999999999621 122222222 22211111111
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. ....+.+++.+||+.||++|||+.|+++
T Consensus 253 --~~-----~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 --KV-----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GC-----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --cc-----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 1135778899999999999999999875
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.1e-54 Score=437.82 Aligned_cols=243 Identities=20% Similarity=0.296 Sum_probs=198.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|+. .+|+.||||++... .....+.|.+|+++|++++|||||++++++.+++..|||||||++
T Consensus 28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~g 107 (350)
T 4b9d_A 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107 (350)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 457899999999999995 57999999999753 233456899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
|+|.+++...+. ..+++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.....
T Consensus 108 g~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 108 GDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHDR----KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHT----TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CcHHHHHHHcCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 999999976543 2478999999999999999999998 9999999999999999999999999999887543
Q ss_pred --ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
...+||+.|||||++.+..|+.++|||||||++|||+||++||.. .+..+.+......... .+.
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~--------~~~~~~~~~i~~~~~~------~~~ 246 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA--------GSMKNLVLKIISGSFP------PVS 246 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTCCC------CCC
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHcCCCC------CCC
Confidence 244699999999999999999999999999999999999999962 2334444444333211 111
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
......+.+++.+||+.||++|||+.|+++.
T Consensus 247 -----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 247 -----LHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -----ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112367888999999999999999999863
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.3e-54 Score=433.64 Aligned_cols=245 Identities=20% Similarity=0.207 Sum_probs=199.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..++||+|+||+||+|+. .+|+.||||+++.... +.+|+.+|++++|||||++++++.+++..|||||||+||+
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence 346899999999999995 4789999999975322 2479999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC-CcEEeccCCccccccc---
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY-EPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~--- 411 (565)
|.++++..+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.....
T Consensus 137 L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 137 LGQLIKQMG-----CLPEDRALYYLGQALEGLEYLHTR----RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999998654 399999999999999999999998 999999999999999887 6999999999876432
Q ss_pred ------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 412 ------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 412 ------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
...+||+.|||||++.+..|+.++|||||||++|||+||++||..... ..+.. ..........
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~---~i~~~~~~~~--- 276 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-----GPLCL---KIASEPPPIR--- 276 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-----SCCHH---HHHHSCCGGG---
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHHHH---HHHcCCCCch---
Confidence 123689999999999999999999999999999999999999973221 11221 1111111000
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
.+. ......+.+++.+||+.||++|||+.|+++.|......
T Consensus 277 -~~~-----~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 277 -EIP-----PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -GSC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -hcC-----ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 111 11223677889999999999999999999988877554
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3e-53 Score=439.14 Aligned_cols=241 Identities=18% Similarity=0.257 Sum_probs=202.5
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+..|||||||++|+
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 457899999999999995 4799999999986656667789999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++... .+++..+..++.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.....
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~----~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQ----GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHC----CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 99999753 389999999999999999999999 9999999999999999999999999999876433
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
.+.+||+.|||||++.+..|+.++|||||||++|||++|++||.. ....+.+...... . .+.+...
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--------~~~~~~~~~i~~~-~-----~~~~~~~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN--------EPPLKAMKMIRDN-L-----PPRLKNL 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHS-C-----CCCCSCT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHcC-C-----CCCCccc
Confidence 355799999999999999999999999999999999999999962 2222222222211 1 1111111
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
......+.+++.+||+.||++|||+.|+++
T Consensus 371 ---~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 ---HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111236778899999999999999999875
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-53 Score=435.67 Aligned_cols=256 Identities=20% Similarity=0.268 Sum_probs=206.1
Q ss_pred hccceecccCceeEEEEEEeC------CCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCC-CCccceEEEEEec-CceEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLLT------GPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSH-PNLLPLIAFYYRK-EEKLL 326 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~-~~~~l 326 (565)
...+.||+|+||+||+|.+.. ++.||||++.... ....++|.+|+++|++++| ||||+++|+|.+. +..|+
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~i 146 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEE
Confidence 356889999999999998643 2479999997543 2345679999999999975 8999999999765 56899
Q ss_pred EEeccCCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC
Q 008431 327 VSDFVPNGSLANLLHVRRAP-----------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY 395 (565)
Q Consensus 327 v~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 395 (565)
|||||++|+|.++|+..... ....++|..++.++.|||+||+|||++ +||||||||+|||+++++
T Consensus 147 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~----~iiHRDLK~~NILl~~~~ 222 (353)
T 4ase_A 147 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKN 222 (353)
T ss_dssp EEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGG
T ss_pred EEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC----CeecCccCccceeeCCCC
Confidence 99999999999999864321 123489999999999999999999998 999999999999999999
Q ss_pred CcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchH
Q 008431 396 EPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLA 468 (565)
Q Consensus 396 ~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~ 468 (565)
.+||+|||+|+..... ....||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...
T Consensus 223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~--------~~~ 294 (353)
T 4ase_A 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------KID 294 (353)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC--------CCS
T ss_pred CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC--------CHH
Confidence 9999999999876433 23457899999999999999999999999999999998 99999632 222
Q ss_pred HHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 469 TWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 469 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..+...+..+.... . +......+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 295 ~~~~~~i~~g~~~~-----~-----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 295 EEFCRRLKEGTRMR-----A-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHHHHHTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCC-----C-----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 33333333332111 1 1112246788899999999999999999999999987543
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.6e-53 Score=424.38 Aligned_cols=240 Identities=20% Similarity=0.283 Sum_probs=201.9
Q ss_pred hccceecccCceeEEEEEE-eCCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEecc
Q 008431 256 ASAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
...++||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 35 ~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~ 114 (311)
T 4aw0_A 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYA 114 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 3568999999999999995 57899999999742 2344578999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 115 ~gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~----~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 115 KNGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGK----GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp TTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred CCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999998654 399999999999999999999999 9999999999999999999999999999876432
Q ss_pred ------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 412 ------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 412 ------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
.+.+||+.|||||++.+..|+.++||||+||++|||+||++||.. .+.............
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~--------~~~~~~~~~i~~~~~------ 251 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA--------GNEGLIFAKIIKLEY------ 251 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCC------
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCC------
Confidence 345799999999999999999999999999999999999999962 223333333333221
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+.. .....+.+++.+||+.||++|||++|++.
T Consensus 252 -~~p~-----~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 252 -DFPE-----KFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -CCCT-----TCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -CCCc-----ccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1111 11235778999999999999999998753
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-52 Score=412.47 Aligned_cols=238 Identities=18% Similarity=0.289 Sum_probs=187.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~- 95 (275)
T 3hyh_A 17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-
Confidence 457899999999999994 579999999997432 233567999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 96 ~g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~----~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 96 GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CEEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 689999997654 399999999999999999999998 9999999999999999999999999999876543
Q ss_pred --ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
.+..||+.|||||++.+..| +.++||||+||++|||+||+.||.. .+............. .+
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~--------~~~~~~~~~i~~~~~-------~~ 231 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--------ESIPVLFKNISNGVY-------TL 231 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCC-------CC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCCC-------CC
Confidence 34679999999999988876 5799999999999999999999962 223333333322211 01
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. .....+.+++.+||+.||++|||++|+++
T Consensus 232 p~-----~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PK-----FLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CT-----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CC-----CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11 11236778899999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-52 Score=417.92 Aligned_cols=235 Identities=22% Similarity=0.252 Sum_probs=188.8
Q ss_pred hccceecccCceeEEEEEEe----CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 256 ASAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
...+.||+|+||+||+|+.. +++.||||+++... ......+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE 106 (304)
T 3ubd_A 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILD 106 (304)
T ss_dssp EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEEC
T ss_pred EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEE
Confidence 35678999999999999853 46789999997432 2334578899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
||+||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 107 y~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~----~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 107 FLRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSL----GIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp CCTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred cCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999998654 399999999999999999999998 99999999999999999999999999998653
Q ss_pred cc----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 410 KE----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 410 ~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
.. .+.+||+.|||||++.+..|+.++||||+||++|||+||++||.. .+..+.+........
T Consensus 178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~--------~~~~~~~~~i~~~~~------ 243 (304)
T 3ubd_A 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG--------KDRKETMTMILKAKL------ 243 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCC------
T ss_pred CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC--------cCHHHHHHHHHcCCC------
Confidence 22 345799999999999999999999999999999999999999962 223333333332211
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL 519 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 519 (565)
... ......+.+++.+||+.||++|||+
T Consensus 244 -~~p-----~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -GMP-----QFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -CCC-----TTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -CCC-----CcCCHHHHHHHHHHcccCHHHCCCC
Confidence 010 1112367888999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.8e-51 Score=405.65 Aligned_cols=241 Identities=20% Similarity=0.277 Sum_probs=184.4
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecC------------
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE------------ 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------------ 322 (565)
..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||+++++|.+.+
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 457899999999999995 478999999997533 334567999999999999999999999997654
Q ss_pred ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 323 EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 323 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
..|+|||||++|+|.+++...... ...++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+||
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~al~ylH~~----~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCTI--EERERSVCLHIFLQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCSG--GGSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcCCC--ChhHHHHHHHHHHHHHHHHHHHHHC----cCccccCcHHHeEECCCCcEEEccC
Confidence 368999999999999999865431 2356778899999999999999998 9999999999999999999999999
Q ss_pred CCccccccc----------------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcc
Q 008431 403 ALVPIVNKE----------------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANAD 466 (565)
Q Consensus 403 Gla~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~ 466 (565)
|+|+..... .+.+||+.|||||++.+..|+.++|||||||++|||++ ||... ..
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-------~~ 232 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-------ME 232 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-------HH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-------cH
Confidence 999876432 12368999999999999999999999999999999997 76421 11
Q ss_pred hHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 467 LATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
....+... ..... .+. .......+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~-~~~~~----p~~------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 RVRTLTDV-RNLKF----PPL------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHH-HTTCC----CHH------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHH-hcCCC----CCC------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111 11100 000 0122235677999999999999999999876
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-48 Score=401.71 Aligned_cols=251 Identities=17% Similarity=0.247 Sum_probs=192.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEec------CceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK------EEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lv 327 (565)
..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++... +..|||
T Consensus 58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 457899999999999995 579999999997432 23346789999999999999999999998643 568999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
||||+ |+|.+++...+ .+++..+..++.||+.||.|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 138 mE~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~----~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 138 LDLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSA----QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EeCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99996 78999997543 499999999999999999999998 999999999999999999999999999986
Q ss_pred cccc--------ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc
Q 008431 408 VNKE--------HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 408 ~~~~--------~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
.... .+.+||+.|||||++.+. .|+.++||||+||++|||++|++||.. .+....+.......
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g--------~~~~~~l~~I~~~~ 279 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG--------KNYVHQLQLIMMVL 279 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC--------SSHHHHHHHHHHHH
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC--------CCHHHHHHHHHHhc
Confidence 5321 345799999999987765 569999999999999999999999962 11222222221110
Q ss_pred c-cC-cccc-----------ccccC-CCCCH-----HHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 479 W-TG-EVFD-----------KDMRG-TKSGE-----GEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 479 ~-~~-~~~d-----------~~~~~-~~~~~-----~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. .. .... ..+.. ...+. .....+.+++.+||+.||++|||+.|+++.
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00 0000 00000 00000 112367889999999999999999998763
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.4e-47 Score=391.29 Aligned_cols=185 Identities=18% Similarity=0.333 Sum_probs=162.6
Q ss_pred ccceecccCceeEEEEEEe----CCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||+||+|+.. +++.||+|++... ....++.+|+++|+.+ +|||||++++++.+.+..|+|||||
T Consensus 25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~ 102 (361)
T 4f9c_A 25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYL 102 (361)
T ss_dssp EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECC
T ss_pred EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCC
Confidence 4578999999999999854 4678999998653 3356788999999998 6999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC-CCcEEeccCCcccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA-YEPLLTDYALVPIVNK 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DfGla~~~~~ 410 (565)
++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 103 ~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~----gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 103 EHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQF----GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp CCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred CcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999984 289999999999999999999998 99999999999999877 7999999999975432
Q ss_pred c--------------------------------ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 411 E--------------------------------HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 411 ~--------------------------------~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
. ...+||+.|||||++.+. .|+.++||||+||++|||+||+.||.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 1 123689999999988765 58999999999999999999999995
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6e-47 Score=411.26 Aligned_cols=245 Identities=21% Similarity=0.313 Sum_probs=202.9
Q ss_pred hccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 256 ASAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
...+.||+|+||+||+|.. .+|+.||+|++........+.+.+|+.+|+.++|||||+++++|.+.+..|+|||||++|
T Consensus 160 ~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg 239 (573)
T 3uto_A 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239 (573)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCC
Confidence 3467899999999999995 579999999998655556678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC--CCcEEeccCCccccccc-
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA--YEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~--~~~kl~DfGla~~~~~~- 411 (565)
+|.+++..... .+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 240 ~L~~~i~~~~~----~l~e~~~~~~~~qi~~al~ylH~~----~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 240 ELFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHEN----NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp BHHHHHTCTTS----CEEHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred cHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 99999965432 399999999999999999999999 99999999999999854 89999999999887544
Q ss_pred --ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
...+||+.|||||++.+..|+.++||||+||++|||++|++||.. .+..+.+......... ..++...
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~--------~~~~~~~~~i~~~~~~--~~~~~~~ 381 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG--------ENDDETLRNVKSCDWN--MDDSAFS 381 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHTTCCC--CCSGGGT
T ss_pred ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC--------cCHHHHHHHHHhCCCC--CCccccc
Confidence 345789999999999999999999999999999999999999962 2222333333222111 1111111
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
. ....+.+++.+||+.||++|||+.|+++
T Consensus 382 ~------~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 G------ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp T------SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C------CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1235778899999999999999999986
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.6e-46 Score=377.57 Aligned_cols=269 Identities=26% Similarity=0.429 Sum_probs=226.5
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||+||+|...++..||||++........+.+.+|+.+++.++||||+++++++...+..++||||+++|+|
T Consensus 43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 35689999999999999888999999998766555677899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~----- 411 (565)
.+++...... ...++|..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 123 ~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 123 KRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLHTR----AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp GGGSSSSCCC-SCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred HHHHhccCCC-ccccCHHHHHHHHHHHHHHHHHhcCC----CeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9998654322 23499999999999999999999998 9999999999999999999999999998764321
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...... .......|.............+++.+..
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNGQLEQIVDPNLAD 275 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS--SCCCHHHHTHHHHTTTCCCSSSSSSCTT
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH--HHHHHHHHhhhccccccHHHhcChhhcc
Confidence 2335789999999988888999999999999999999999999743322 2345566666555555555666665543
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. .......+.+++.+||+.||++|||+.||++.|+.+....
T Consensus 276 ~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 276 KI-RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CS-CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cc-CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 32 4667788999999999999999999999999999987543
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.8e-46 Score=405.39 Aligned_cols=242 Identities=19% Similarity=0.207 Sum_probs=193.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC---ccCHHHHH---HHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS---NVGKEDFH---EHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..++||+|+||+||+|+. .+|+.||||++.+.. ......+. .++.+++.++|||||+++++|.+.+.+|+|||
T Consensus 193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE 272 (689)
T 3v5w_A 193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD 272 (689)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence 458999999999999995 478999999997421 12222333 34677788899999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
||+||+|.++|.... .+++..+..++.||+.||.|||++ +||||||||+||||+.++.+||+|||+|+...
T Consensus 273 y~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~----gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 273 LMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNR----FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp CCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999998654 399999999999999999999998 99999999999999999999999999998765
Q ss_pred cc--ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 410 KE--HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 410 ~~--~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
.. .+.+||+.|||||++.. ..|+.++||||+||++|||++|++||..... .+............ .
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~-----~~~~~i~~~i~~~~-------~ 411 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT-----KDKHEIDRMTLTMA-------V 411 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC-----CCHHHHHHHHHHCC-------C
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhhcCCC-------C
Confidence 43 45689999999999864 5799999999999999999999999963221 11222222221111 0
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWD-----LREAVE 524 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~ 524 (565)
.+ +......+.+++.+||+.||++|++ ++||.+
T Consensus 412 ~~-----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 EL-----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CC-----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CC-----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 01 1111236788899999999999998 678754
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.8e-46 Score=378.88 Aligned_cols=270 Identities=30% Similarity=0.534 Sum_probs=226.6
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|...+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 34 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 113 (326)
T 3uim_A 34 NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 113 (326)
T ss_dssp STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCB
T ss_pred cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCC
Confidence 357899999999999998889999999987532 2233479999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++...... ...++|..+..++.|++.||+|||+.+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 114 L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 191 (326)
T 3uim_A 114 VASCLRERPES-QPPLDWPKRQRIALGSARGLAYLHDHCDP-KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 191 (326)
T ss_dssp HHHHHHCCSTT-CCCCCHHHHHHHHHHHHHHHHHHHHSSSS-CEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCE
T ss_pred HHHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEeCCCchhhEEECCCCCEEeccCccccccCcccccc
Confidence 99999865432 33599999999999999999999997433 7999999999999999999999999999765432
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....||+.|+|||++.+..++.++|||||||++|||+||+.||...............|+.............+..+..
T Consensus 192 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 3uim_A 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG 271 (326)
T ss_dssp ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTT
T ss_pred cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhcc
Confidence 2334889999999988888999999999999999999999999754444444556777777766666666666666544
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHh
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMEL 529 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 529 (565)
. ........+.+++.+||+.||++|||+.||++.|+..
T Consensus 272 ~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 272 N-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp S-CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred c-cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 3 3467788999999999999999999999999999864
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=365.12 Aligned_cols=251 Identities=22% Similarity=0.400 Sum_probs=207.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|... ++..||+|++........+.|.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus 14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 93 (310)
T 3s95_A 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93 (310)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence 4578999999999999964 688999999876656667789999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc---
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH--- 412 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~--- 412 (565)
|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 94 LRGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSM----NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp HHHHHHHCCT----TSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred HHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999986433 399999999999999999999998 99999999999999999999999999997654321
Q ss_pred ---------------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCC-CcchHHHHHHHhh
Q 008431 413 ---------------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGA-NADLATWVNSVVR 476 (565)
Q Consensus 413 ---------------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~ 476 (565)
...||+.|+|||++.+..++.++|||||||++|||++|..|+......... .........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~---- 241 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD---- 241 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH----
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc----
Confidence 345889999999999999999999999999999999999998643222111 111111111
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
. .... .....+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 242 ~---------~~~~-----~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 242 R---------YCPP-----NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp H---------TCCT-----TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred c---------cCCC-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 1 0000 11125788999999999999999999999999997653
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.2e-44 Score=363.04 Aligned_cols=241 Identities=21% Similarity=0.320 Sum_probs=200.9
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (297)
T 3fxz_A 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS 103 (297)
T ss_dssp CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence 457899999999999994 6789999999986656667889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 104 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 104 LTDVVTET------CMDEGQIAAVCRECLQALEFLHSN----QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhC----CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 99999753 289999999999999999999998 9999999999999999999999999998765433
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.. ................ ...
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~~~~~~~~~~~-~~~------- 237 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN--------ENPLRALYLIATNGTP-ELQ------- 237 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHHCSC-CCS-------
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCC-CCC-------
Confidence 334689999999999999999999999999999999999999962 1222222222222111 110
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+......+.+++.+||+.||++|||+.|+++
T Consensus 238 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 -NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01122246788999999999999999999975
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-44 Score=355.48 Aligned_cols=248 Identities=24% Similarity=0.374 Sum_probs=206.1
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||+||+|...++..||+|++... ....+++.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 92 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL 92 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcH
Confidence 45789999999999999888889999999754 33467899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~----- 411 (565)
.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 ~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 93 SDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp HHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred HHHHHhcCc----ccCHHHHHHHHHHHHHHHHHHHhC----CeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999976443 389999999999999999999998 9999999999999999999999999999865432
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+++.|+|||++....++.++|||||||++|||++ |+.||.. .............. ....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~--------~~~~~~~~~~~~~~---~~~~~---- 229 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGF---RLYKP---- 229 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHTTC---CCCCC----
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC--------CCHHHHHHHHhcCc---cCCCC----
Confidence 23345678999999988889999999999999999999 9999862 12222222222111 00011
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 230 ----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 ----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11123678889999999999999999999999999764
No 25
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.8e-45 Score=370.32 Aligned_cols=263 Identities=24% Similarity=0.316 Sum_probs=202.1
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCc----eEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEE----KLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~lv~E~~~ 332 (565)
..++||+|+||+||+|+. .++.||||++... ......+.+|+.++++++|||||++++++..... .++||||++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~ 105 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105 (322)
T ss_dssp EEEEEECSTTCEEEEEEE-TTEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhheecccCceEEEEEEE-CCCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCC
Confidence 457899999999999986 4789999998653 2334456779999999999999999999987553 699999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC------CCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF------PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
+|+|.+++... .++|..+..++.|++.||+|||+.+ +..+|+||||||+|||++.++.+||+|||+++
T Consensus 106 ~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 106 KGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp TCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 99999999753 2899999999999999999999751 12279999999999999999999999999997
Q ss_pred ccccc------ccccccccccCCCccCCC-----CCCcchhHHHHHHHHHHHHcCCCCccccccCCCC--------Ccch
Q 008431 407 IVNKE------HAQLHMVAYKSPEFNQTD-----GVTRKTDVWSLGILILELLTGKFPANYLAQGKGA--------NADL 467 (565)
Q Consensus 407 ~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~--------~~~~ 467 (565)
..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||......... ....
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 65432 234689999999988763 4567899999999999999999999743221110 0011
Q ss_pred HHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 468 ATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 468 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+....... ...+.+............+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 260 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 260 EDMQEVVVHK-----KKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcc-----cCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1111111111 11111111111234556799999999999999999999999999998754
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.6e-44 Score=364.29 Aligned_cols=255 Identities=24% Similarity=0.339 Sum_probs=197.7
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
...+.||+|+||+||+|+. ++..||||.+.... ....++|.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 40 ~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred eeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 3467899999999999986 68899999987543 23345799999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--CccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT--LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++.....
T Consensus 119 ~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~----~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 119 GSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNR----NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTS----SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcC----CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 999999975331 11388999999999999999999998 7 999999999999999999999999999765433
Q ss_pred ----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....||+.|+|||++.+..++.++|||||||++|||+||+.||... ................ .
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~--------~~~~~~~~~~~~~~~~-----~ 259 (309)
T 3p86_A 193 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL--------NPAQVVAAVGFKCKRL-----E 259 (309)
T ss_dssp ---------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHHSCCCC-----C
T ss_pred ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcCCCC-----C
Confidence 3456889999999999999999999999999999999999999632 2222222211111100 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCC
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDND 535 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 535 (565)
+ +......+.+++.+||+.||++|||+.|+++.|+.+.....+
T Consensus 260 ~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 260 I-----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred C-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 1 111223678899999999999999999999999999876543
No 27
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.5e-44 Score=364.61 Aligned_cols=240 Identities=19% Similarity=0.301 Sum_probs=199.4
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...+..|+||||+++
T Consensus 19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~ 98 (328)
T 3fe3_A 19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98 (328)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCC
Confidence 357899999999999996 68999999999753 233456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 ~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 99 GEVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQK----RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp CBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 99999997654 389999999999999999999998 9999999999999999999999999999765433
Q ss_pred -ccccccccccCCCccCCCCCC-cchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVT-RKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~-~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....||+.|+|||++.+..++ .++|||||||++|||++|+.||.. .+.............. +
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~~~~i~~~~~~-------~- 233 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG--------QNLKELRERVLRGKYR-------I- 233 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCC-------C-
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCC-------C-
Confidence 345789999999998887765 799999999999999999999962 2333333333222110 0
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 234 ----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 ----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01112367788899999999999999999764
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.6e-44 Score=371.86 Aligned_cols=254 Identities=20% Similarity=0.310 Sum_probs=204.6
Q ss_pred ccceecccCceeEEEEEEe--------CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL--------TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLL 326 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 326 (565)
..+.||+|+||.||+|... ++..||||+++... ....+.+.+|+.+++++ +|||||+++++|.+.+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 4678999999999999853 34469999997542 23356799999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC
Q 008431 327 VSDFVPNGSLANLLHVRRAP-----------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY 395 (565)
Q Consensus 327 v~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 395 (565)
||||+++|+|.+++...... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTC
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CeeccccchhhEEECCCC
Confidence 99999999999999875421 123489999999999999999999998 999999999999999999
Q ss_pred CcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchH
Q 008431 396 EPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLA 468 (565)
Q Consensus 396 ~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~ 468 (565)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||... ...
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~--------~~~ 312 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI--------PVE 312 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CGG
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC--------CHH
Confidence 9999999999865432 22345678999999988999999999999999999999 99998632 111
Q ss_pred HHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 469 TWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 469 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..... +...... .. +......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 313 ~~~~~-~~~~~~~-----~~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 ELFKL-LKEGHRM-----DK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp GHHHH-HHTTCCC-----CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHH-HhcCCCC-----CC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 12211 1111110 01 1122246888999999999999999999999999987543
No 29
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.3e-43 Score=359.53 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=201.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 3468999999999999975 799999999986666667889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 129 L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 198 (321)
T 2c30_A 129 LTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQ----GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR 198 (321)
T ss_dssp HHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB
T ss_pred HHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc
Confidence 99998642 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .............. . +.+..
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~--------~~~~~~~~~~~~~~-~-----~~~~~- 263 (321)
T 2c30_A 199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS--------DSPVQAMKRLRDSP-P-----PKLKN- 263 (321)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSS-C-----CCCTT-
T ss_pred ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHhcCC-C-----CCcCc-
Confidence 345689999999999999999999999999999999999999962 12222222222111 1 11100
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 264 --~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 264 --SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122367788899999999999999999764
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.9e-44 Score=364.99 Aligned_cols=250 Identities=21% Similarity=0.347 Sum_probs=202.1
Q ss_pred ccceecccCceeEEEEEEe----CCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||+||+|... .+..||||+++.. .....+.|.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 4688999999999999964 3345999999753 3334567999999999999999999999999989999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 ~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 133 ENGSLDTFLRTHDG----QFTIMQLVGMLRGVGAGMRYLSDL----GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp TTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred CCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999975432 399999999999999999999998 9999999999999999999999999999876433
Q ss_pred c-------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 412 H-------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 412 ~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
. ...+|+.|+|||++.+..++.++|||||||++|||++ |+.||... ...............
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~--------~~~~~~~~~~~~~~~--- 273 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM--------TNRDVISSVEEGYRL--- 273 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS--------CHHHHHHHHHTTCCC---
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHHcCCCC---
Confidence 1 2234668999999988889999999999999999999 99998621 122222222111100
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
. .+......+.+++.+||+.||++|||+.||++.|+.+....
T Consensus 274 ---~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 274 ---P-----APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp ---C-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ---C-----CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 0 01122246888999999999999999999999999997654
No 31
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-44 Score=365.64 Aligned_cols=240 Identities=19% Similarity=0.331 Sum_probs=192.9
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 14 i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 93 (347)
T 3zgw_A 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93 (347)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 457899999999999995 578999999987533 233467899999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 94 ~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 94 ELFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQ----GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 9999997654 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred --ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.. ................ +
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~~-------~ 229 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD--------DNVMALYKKIMRGKYD-------V 229 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCC-------C
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCCCC-------C
Confidence 23468999999999888775 8999999999999999999999962 2233333333322110 1
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 230 p-----~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 P-----KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp C-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C-----CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 1112356788999999999999999999875
No 32
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-44 Score=374.76 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=203.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|... ++..||||.++... ....++|.+|+++|++++|||||++++++...+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 4678999999999999975 78899999987532 223457899999999999999999999999989999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 198 ~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 198 DFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLESK----CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp BHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999986543 389999999999999999999998 9999999999999999999999999998764332
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....+++.|+|||.+....++.++|||||||++|||+| |+.||... .. ..+...+..+... .
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~--------~~-~~~~~~~~~~~~~-----~ 335 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL--------SN-QQTREFVEKGGRL-----P 335 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS--------CH-HHHHHHHHTTCCC-----C
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------CH-HHHHHHHHcCCCC-----C
Confidence 11234678999999888889999999999999999999 99998632 11 1122222221110 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
. +......+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 336 ~-----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 336 C-----PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0 111223678899999999999999999999999998754
No 33
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.8e-44 Score=352.87 Aligned_cols=249 Identities=23% Similarity=0.387 Sum_probs=204.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||+||+|...++..||+|++... ....+++.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcH
Confidence 45789999999999999888889999999754 33467899999999999999999999999998999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH---- 412 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~---- 412 (565)
.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 91 ~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 91 LNYLRSHGK----GLEPSQLLEMCYDVCEGMAFLESH----QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp HHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred HHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 999986543 389999999999999999999998 99999999999999999999999999987654332
Q ss_pred -cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 413 -AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 413 -~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||... ............. ....+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~~~~~~~~~---~~~~~---- 227 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY--------TNSEVVLKVSQGH---RLYRP---- 227 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHHTTC---CCCCC----
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCcccc--------ChHHHHHHHHcCC---CCCCC----
Confidence 2345677999999988889999999999999999999 99998621 1222222221111 01111
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
......+.+++.+||+.||++|||+.|+++.|+.+++..
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 ----HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp ----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ----CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 111236788999999999999999999999999997654
No 34
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.9e-44 Score=358.20 Aligned_cols=251 Identities=21% Similarity=0.340 Sum_probs=194.9
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhc--CCCCCccceEEEEEec----CceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS--LSHPNLLPLIAFYYRK----EEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~~~~lv~E~ 330 (565)
..+.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++... ...++||||
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 87 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY 87 (301)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred EEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhh
Confidence 457899999999999987 7899999998642 34566677777666 8999999999997653 357999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY--------KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH--------~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 88 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~----~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 88 HEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP----AIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp CTTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC----EEECSCCCGGGEEECTTSCEEECCC
T ss_pred ccCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC----CeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999532 3899999999999999999999 66 8999999999999999999999999
Q ss_pred CCcccccccc--------cccccccccCCCccCCC------CCCcchhHHHHHHHHHHHHcC----------CCCccccc
Q 008431 403 ALVPIVNKEH--------AQLHMVAYKSPEFNQTD------GVTRKTDVWSLGILILELLTG----------KFPANYLA 458 (565)
Q Consensus 403 Gla~~~~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~DvwS~Gvil~el~tg----------~~p~~~~~ 458 (565)
|+++...... ...||+.|+|||++.+. .++.++|||||||++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654322 23689999999988776 455799999999999999999 77875332
Q ss_pred cCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHh
Q 008431 459 QGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMEL 529 (565)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 529 (565)
... ... ..+......... .+.+............+.+++.+||+.||++|||+.||++.|+++
T Consensus 238 ~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PND---PSF-EDMRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSS---CCH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---cch-hhhhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 211 111 122222111111 111111111234567899999999999999999999999999986
No 35
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.3e-44 Score=370.59 Aligned_cols=249 Identities=21% Similarity=0.372 Sum_probs=194.0
Q ss_pred ccceecccCceeEEEEEEe----CCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||+||+|+.. ++..||||+++.. .....++|.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 128 (373)
T 2qol_A 49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM 128 (373)
T ss_dssp CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence 4678999999999999864 5778999999753 2334567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 129 ~~~sL~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 129 ENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYLSDM----GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp TTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred CCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999976432 489999999999999999999998 9999999999999999999999999999876433
Q ss_pred c-------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 412 H-------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 412 ~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
. ...+++.|+|||++....++.++|||||||++|||++ |+.||... ......... .....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~--------~~~~~~~~i-~~~~~--- 268 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM--------SNQDVIKAV-DEGYR--- 268 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC--------CHHHHHHHH-HTTEE---
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHHH-HcCCC---
Confidence 1 1223567999999988899999999999999999998 99998621 122222211 11110
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
.+ .+......+.+++.+||+.||++|||+.||++.|+++...
T Consensus 269 -~~------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 269 -LP------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -CC------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CC------CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 00 0112234688899999999999999999999999998654
No 36
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.1e-44 Score=357.90 Aligned_cols=259 Identities=20% Similarity=0.338 Sum_probs=201.4
Q ss_pred ccceecccCceeEEEEEE-----eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEec--CceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL-----LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--EEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~E 329 (565)
..+.||+|+||+||+|++ .+++.||||++........+.|.+|+.++++++||||+++++++... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 457899999999999984 36789999999865555567899999999999999999999998654 56899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp CCTTCBHHHHHHHCGG----GCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred eCCCCCHHHHHHhccc----ccCHHHHHHHHHHHHHHHHHHhcC----CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999986543 389999999999999999999998 99999999999999999999999999998764
Q ss_pred cc-------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccC-------CCCCcchHHHHHHHh
Q 008431 410 KE-------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQG-------KGANADLATWVNSVV 475 (565)
Q Consensus 410 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~ 475 (565)
.. ....++..|+|||.+.+..++.++|||||||++|||+||..|+...... ..........+....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 33 1234567799999998889999999999999999999999997532110 000000011111111
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..... ...+......+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 246 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 246 KNNGR----------LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HTTCC----------CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hccCc----------CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 11100 0011122346888999999999999999999999999997653
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.8e-43 Score=351.71 Aligned_cols=248 Identities=20% Similarity=0.353 Sum_probs=202.4
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||+||+|...++..||+|++... ....+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 106 (283)
T 3gen_A 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106 (283)
T ss_dssp EEEECC---CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBH
T ss_pred hHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcH
Confidence 45789999999999999888889999999754 33457899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~----- 411 (565)
.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 107 ~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 107 LNYLREMRH----RFQTQQLLEMCKDVCEAMEYLESK----QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp HHHHHCGGG----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred HHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 999976433 399999999999999999999998 9999999999999999999999999999765432
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||... ............. ....+
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~--------~~~~~~~~~~~~~---~~~~~---- 243 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF--------TNSETAEHIAQGL---RLYRP---- 243 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS--------CHHHHHHHHHTTC---CCCCC----
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc--------ChhHHHHHHhccc---CCCCC----
Confidence 23345678999999988889999999999999999999 99998631 1222222221111 00000
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 244 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 244 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11123678899999999999999999999999998754
No 38
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.8e-43 Score=351.66 Aligned_cols=259 Identities=19% Similarity=0.307 Sum_probs=205.4
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc---cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|.. .++..||+|.+..... ...+.|.+|+.++++++||||+++++++.+.+..|+||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 94 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence 357899999999999995 4688999999864322 234678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 95 GPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM----RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp SCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 999999998654 389999999999999999999998 9999999999999999999999999999876433
Q ss_pred ----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....||+.|+|||.+.+..++.++|||||||++|||+||+.||.. ................ .. ...
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~-~~-~~~ 235 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG--------ETAVSIAIKHIQDSVP-NV-TTD 235 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS--------SCHHHHHHHHHSSCCC-CH-HHH
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHhhccCC-Cc-chh
Confidence 234579999999999999999999999999999999999999962 1222222222222111 00 011
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHhhccCCCCCCc
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRW-DLREAVEKIMELKERDNDNEDY 539 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~i~~~~~~~~~~ 539 (565)
... .....+.+++.+||+.||++|| +++++.+.|+++........+.
T Consensus 236 ~~~-----~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~ 283 (294)
T 4eqm_A 236 VRK-----DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDV 283 (294)
T ss_dssp SCT-----TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCC
T ss_pred ccc-----CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcch
Confidence 111 1123678899999999999999 9999999999987665444443
No 39
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.3e-43 Score=376.69 Aligned_cols=250 Identities=22% Similarity=0.373 Sum_probs=205.0
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
...+.||+|+||+||+|...++..||||+++.. ....++|.+|+.+|++++|||||++++++. .+..++||||+++|+
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~ 268 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS 268 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCc
Confidence 356789999999999999988889999999754 345788999999999999999999999985 667899999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.++++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 269 L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 269 LLDFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQR----NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp HHHHHHSHHH---HTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred HHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 9999975432 1388999999999999999999998 9999999999999999999999999999876432
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....+++.|+|||++....++.++|||||||++|||+| |+.||... ...+..... ..+...
T Consensus 342 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~--------~~~~~~~~i-~~~~~~-------- 404 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM--------SNPEVIRAL-ERGYRM-------- 404 (454)
T ss_dssp TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHHHHH-HHTCCC--------
T ss_pred cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC--------CHHHHHHHH-HcCCCC--------
Confidence 22345678999999988889999999999999999999 99999631 222222222 121110
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..+......+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 405 --~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 405 --PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 001122346888999999999999999999999999986543
No 40
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.1e-43 Score=357.79 Aligned_cols=240 Identities=20% Similarity=0.234 Sum_probs=199.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|+.. +|+.||+|.++.. .....+.+.+|+.+++.++||||+++++++.+.+..|+||||++
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~ 88 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 88 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence 4578999999999999964 6899999999753 23446678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc--
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK-- 410 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~-- 410 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 89 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 89 GGELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSR----DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp TCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 999999997654 389999999999999999999998 999999999999999999999999999976432
Q ss_pred --cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 411 --EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 411 --~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+............. .+
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~-------~~ 224 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--------QDHERLFELILMEEI-------RF 224 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCC-------CC
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC--------CCHHHHHHHHHcCCC-------CC
Confidence 2345789999999999999999999999999999999999999962 222222222222210 01
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRW-----DLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~~ 525 (565)
. ......+.+++.+||+.||++|| ++.|+++.
T Consensus 225 p-----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 P-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp C-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C-----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 11123678888999999999999 89999764
No 41
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=365.36 Aligned_cols=255 Identities=21% Similarity=0.301 Sum_probs=206.3
Q ss_pred hccceecccCceeEEEEEEe--------CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceE
Q 008431 256 ASAEVLGSGSFGSSYKAVLL--------TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKL 325 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 325 (565)
...+.||+|+||+||+|... .+..||||+++... ....+++.+|+++++++ +|||||++++++...+..+
T Consensus 72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ 151 (382)
T 3tt0_A 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY 151 (382)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceE
Confidence 45688999999999999853 22469999987542 33346799999999999 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC
Q 008431 326 LVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA 394 (565)
Q Consensus 326 lv~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~ 394 (565)
+||||+++|+|.+++......+ ...+++..++.++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 152 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK----KCIHRDLAARNVLVTED 227 (382)
T ss_dssp EEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTT
T ss_pred EEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCcceEEEcCC
Confidence 9999999999999998754211 23499999999999999999999998 99999999999999999
Q ss_pred CCcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcch
Q 008431 395 YEPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADL 467 (565)
Q Consensus 395 ~~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~ 467 (565)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.. ...
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~--------~~~ 299 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG--------VPV 299 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--------CCH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC--------CCH
Confidence 99999999999865432 23346788999999989999999999999999999999 9999862 222
Q ss_pred HHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 468 ATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 468 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
....... ....... . +......+.+++.+||+.||++|||+.||++.|+++....
T Consensus 300 ~~~~~~~-~~~~~~~-----~-----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 300 EELFKLL-KEGHRMD-----K-----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHH-HTTCCCC-----C-----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHH-HcCCCCC-----C-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 2222222 2211110 0 0112236888999999999999999999999999997654
No 42
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.4e-43 Score=350.67 Aligned_cols=259 Identities=26% Similarity=0.460 Sum_probs=208.6
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccC----ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS----NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
+.||+|+||+||+|.. ++..||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 6899999999999986 68899999987432 223567999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... ...++|..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 189 (307)
T 2nru_A 116 SLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFLHEN----HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189 (307)
T ss_dssp BHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC
T ss_pred cHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhcC----CeecCCCCHHHEEEcCCCcEEEeeccccccccccccc
Confidence 99999975432 23499999999999999999999998 9999999999999999999999999998765432
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc-ccCcccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE-WTGEVFDKD 487 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~ 487 (565)
....+|+.|+|||.+.+ .++.++|||||||++|||++|+.||...... ..+..+........ .....+++.
T Consensus 190 ~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 264 (307)
T 2nru_A 190 VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP----QLLLDIKEEIEDEEKTIEDYIDKK 264 (307)
T ss_dssp EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS----SBTTHHHHHHHTTSCCHHHHSCSS
T ss_pred ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch----HHHHHHHHHhhhhhhhhhhhcccc
Confidence 23467899999998765 5899999999999999999999999743221 22233332222211 112233333
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
+.. ........+.+++.+||+.||++|||+.||++.|+++..
T Consensus 265 ~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 265 MND--ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CSC--CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred ccc--cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 322 235667789999999999999999999999999999864
No 43
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.4e-43 Score=354.27 Aligned_cols=253 Identities=21% Similarity=0.337 Sum_probs=197.7
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
...+.||+|+||+||+|.. ...+|+|.++... ....+.|.+|+.++++++||||+++++++ ..+..++||||+++
T Consensus 39 ~~~~~lG~G~~g~Vy~~~~--~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~ 115 (307)
T 3lb7_A 39 MLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEG 115 (307)
T ss_dssp CEEEEEEECSSCEEEEEES--SSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCSS
T ss_pred EEEeEecCCCCeEEEEEEE--CCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-ccCcEEEEEecCCC
Confidence 3457899999999999974 3468999887432 23346799999999999999999999976 45668999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 116 ~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 116 SSLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAK----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CBHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred CcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999975443 499999999999999999999998 9999999999999999999999999999754321
Q ss_pred ----ccccccccccCCCccC---CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccc
Q 008431 412 ----HAQLHMVAYKSPEFNQ---TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVF 484 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (565)
....||+.|+|||++. ...++.++|||||||++|||+||+.||.... ....+.........
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~--------~~~~~~~~~~~~~~---- 255 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN--------NRDQIIFMVGRGYA---- 255 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--------CHHHHHHHHHHTCC----
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC--------cHHHHHHHHhcCCC----
Confidence 2346889999999875 5678999999999999999999999996321 11222222222111
Q ss_pred cccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 485 DKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 485 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.+.+... .......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 256 ~~~~~~~--~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 256 SPDLSKL--YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCCSTTS--CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred Ccchhhh--hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 1111111 0112246888999999999999999999999999987543
No 44
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.3e-43 Score=373.10 Aligned_cols=248 Identities=22% Similarity=0.373 Sum_probs=202.5
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecC-ceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE-EKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|.. .+..||||.++... ..+.|.+|+.+|++++|||||++++++...+ ..++||||+++|+
T Consensus 197 ~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 457899999999999987 47799999997543 4678999999999999999999999988765 7899999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-ccc
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-HAQ 414 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-~~~ 414 (565)
|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 274 L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 274 LVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp HHHHHHHHCT---TTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred HHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 9999986543 2378999999999999999999998 9999999999999999999999999999765432 233
Q ss_pred cccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCC
Q 008431 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKS 493 (565)
Q Consensus 415 ~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 493 (565)
.+++.|+|||++....++.++|||||||++|||+| |+.||..... ..+... +..+... ..
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~~~~~~----i~~~~~~-----~~----- 407 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPR----VEKGYKM-----DA----- 407 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----TTHHHH----HHTTCCC-----CC-----
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH----HHcCCCC-----CC-----
Confidence 56788999999999999999999999999999999 9999973211 112211 1111110 00
Q ss_pred CHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 494 GEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 494 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 408 p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 1122346788999999999999999999999999997654
No 45
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=365.84 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=203.0
Q ss_pred ccceecccCceeEEEEEEe------CCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||+||+|.+. ++..||||+++.. ......++.+|+.++++++|||||++++++......++|||
T Consensus 75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 154 (367)
T 3l9p_A 75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE 154 (367)
T ss_dssp EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence 4578999999999999843 4568999998643 23345579999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC---CcEEeccCC
Q 008431 330 FVPNGSLANLLHVRRAP--GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY---EPLLTDYAL 404 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DfGl 404 (565)
|+++|+|.+++...+.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 99999999999875432 123489999999999999999999998 999999999999999544 599999999
Q ss_pred cccccc------cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhh
Q 008431 405 VPIVNK------EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVRE 477 (565)
Q Consensus 405 a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 477 (565)
++.... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.. .............
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~--------~~~~~~~~~i~~~ 302 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS--------KSNQEVLEFVTSG 302 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT--------CCHHHHHHHHHTT
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CCHHHHHHHHHcC
Confidence 875422 223456889999999988899999999999999999998 9999862 1222222222221
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 478 EWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 478 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
... + . +......+.+++.+||+.||++|||+.||++.|+.+...
T Consensus 303 ~~~----~--~-----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 303 GRM----D--P-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp CCC----C--C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCC----C--C-----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 110 0 0 111223678899999999999999999999999998764
No 46
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.2e-43 Score=350.82 Aligned_cols=248 Identities=23% Similarity=0.345 Sum_probs=200.9
Q ss_pred ccceecccCceeEEEEEEe-CC-------CeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TG-------PAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 328 (565)
..+.||+|+||+||+|... ++ ..||+|.+........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 4578999999999999954 34 469999997665666788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC--------cEEe
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE--------PLLT 400 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--------~kl~ 400 (565)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+
T Consensus 92 e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKN----CINILWKLEVAKQLAAAMHFLEEN----TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp ECCTTCBHHHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred ECCCCCCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHhhC----CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999986543 389999999999999999999998 9999999999999998887 9999
Q ss_pred ccCCcccccccccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCC-CccccccCCCCCcchHHHHHHHhhhc
Q 008431 401 DYALVPIVNKEHAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKF-PANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 401 DfGla~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
|||++..........+|+.|+|||++.+ ..++.++|||||||++|||++|.. |+.. ........ .....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~--------~~~~~~~~-~~~~~ 234 (289)
T 4fvq_A 164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA--------LDSQRKLQ-FYEDR 234 (289)
T ss_dssp CCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT--------SCHHHHHH-HHHTT
T ss_pred cCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc--------cchHHHHH-Hhhcc
Confidence 9999987766666678899999998877 678999999999999999999654 4431 11111111 11110
Q ss_pred ccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 479 WTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 479 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
....+.. ...+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 235 ---~~~~~~~---------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 235 ---HQLPAPK---------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ---CCCCCCS---------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ---CCCCCCC---------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 0001111 125778889999999999999999999999987654
No 47
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-43 Score=344.93 Aligned_cols=248 Identities=24% Similarity=0.391 Sum_probs=205.7
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL 90 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcH
Confidence 457899999999999998888899999997543 3457899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~----- 411 (565)
.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 91 SDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEA----CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp HHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred HHHHhhCcc----cCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999986543 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....++..|+|||++....++.++|||||||++|||++ |+.||.. ............. .. ...+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--------~~~~~~~~~i~~~-~~--~~~~---- 227 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTG-FR--LYKP---- 227 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHTT-CC--CCCC----
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC--------CCHHHHHHHHhcC-Cc--CCCC----
Confidence 23345678999999888889999999999999999999 8999862 1222222222211 10 0000
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
......+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 228 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 228 ----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11123678899999999999999999999999999764
No 48
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.5e-43 Score=359.13 Aligned_cols=243 Identities=21% Similarity=0.328 Sum_probs=198.5
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc------cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN------VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||+||+|... +|..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence 4578999999999999964 689999999975332 135789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC----CcEEeccCCc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY----EPLLTDYALV 405 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DfGla 405 (565)
|+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 96 ~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp CCCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999996533 399999999999999999999998 999999999999998777 7999999999
Q ss_pred cccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
+..... ....||+.|+|||++.+..++.++|||||||++|||++|++||.. ...............
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~--------~~~~~~~~~i~~~~~--- 235 (361)
T 2yab_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------DTKQETLANITAVSY--- 235 (361)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHTTCC---
T ss_pred eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhcCC---
Confidence 876543 345689999999999988999999999999999999999999962 122222222222111
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+++.... .....+.+++.+||..||++|||+.|+++
T Consensus 236 ~~~~~~~~-----~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEFFS-----QTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchhcc-----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111101 11235788999999999999999999875
No 49
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.4e-43 Score=358.64 Aligned_cols=248 Identities=22% Similarity=0.381 Sum_probs=194.6
Q ss_pred ccceecccCceeEEEEEEe-CCCe----eEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPA----MVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|+.. +++. ||+|.++.. .....++|.+|+.++++++||||++++++|... ..++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 4578999999999999953 4544 577777532 234567899999999999999999999999865 47899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 98 MPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp CTTCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred cCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhC----CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999987543 399999999999999999999998 999999999999999999999999999976543
Q ss_pred cc------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 411 EH------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 411 ~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
.. ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..+.. .+......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~----~~~~~~~~-- 238 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISS----ILEKGERL-- 238 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHH----HHHTTCCC--
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHHHH----HHHcCCCC--
Confidence 32 2345778999999989999999999999999999999 9999963211 11111 11111100
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 239 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 --------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 00112234688899999999999999999999999988653
No 50
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-43 Score=355.23 Aligned_cols=244 Identities=19% Similarity=0.282 Sum_probs=199.0
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|... ++..+|+|.+... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|+
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~ 87 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD 87 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCB
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCC
Confidence 4578999999999999964 6788999988643 3345678999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC--CCCcEEeccCCccccccc--
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN--AYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~-- 411 (565)
|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 88 L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 88 IFERINTSAF----ELNEREIVSYVHQVCEALQFLHSH----NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp HHHHHTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999975432 489999999999999999999998 9999999999999987 789999999999876443
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||.. ......+......... .++....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~---~~~~~~~ 228 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA--------ETNQQIIENIMNAEYT---FDEEAFK 228 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCCC---CCHHHHT
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC--------CCHHHHHHHHHcCCCC---CChhhhc
Confidence 234678999999999888899999999999999999999999962 2222333333222111 0100000
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 229 -----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 -----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112367889999999999999999999874
No 51
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-43 Score=359.27 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=203.9
Q ss_pred ccceecccCceeEEEEEEe------CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||.||+|... ++..||||.++... ....+.|.+|+.++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 4578999999999999974 34789999997542 2335679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEE
Q 008431 330 FVPNGSLANLLHVRRAP-------------------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVL 390 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NIL 390 (565)
|+++|+|.+++...... ....+++..++.++.||+.||.|||+. +|+||||||+|||
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl 206 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER----KFVHRDLATRNCL 206 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEE
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCcceEE
Confidence 99999999999864321 013599999999999999999999998 9999999999999
Q ss_pred EcCCCCcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCC
Q 008431 391 LDNAYEPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGA 463 (565)
Q Consensus 391 l~~~~~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~ 463 (565)
++.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~------- 279 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG------- 279 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-------
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC-------
Confidence 999999999999998765322 23456788999999888889999999999999999999 9999862
Q ss_pred CcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 464 NADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.......... ..+.... . +......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 280 -~~~~~~~~~~-~~~~~~~-----~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 280 -MAHEEVIYYV-RDGNILA-----C-----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -SCHHHHHHHH-HTTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -CChHHHHHHH-hCCCcCC-----C-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1222222222 2211110 0 0112236888999999999999999999999999997654
No 52
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=352.94 Aligned_cols=243 Identities=21% Similarity=0.326 Sum_probs=197.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc------cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN------VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||.||+|... +|..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 4678999999999999964 689999999875322 235789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC----CcEEeccCCc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY----EPLLTDYALV 405 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DfGla 405 (565)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .+||+|||++
T Consensus 95 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 95 LVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSL----QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp CCCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred cCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHC----CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999997533 389999999999999999999998 999999999999998887 7999999999
Q ss_pred cccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
+..... ....+|+.|+|||++....++.++|||||||++|||++|+.||.. ............... .
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~~~~~~~--~ 235 (326)
T 2y0a_A 166 HKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------DTKQETLANVSAVNY--E 235 (326)
T ss_dssp EECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHHTCC--C
T ss_pred eECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC--------CCHHHHHHHHHhcCC--C
Confidence 876432 345689999999999988999999999999999999999999962 112222222211110 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
..++... .....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~------~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FEDEYFS------NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCHHHHT------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCccccc------cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 11235778899999999999999999986
No 53
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.3e-43 Score=360.00 Aligned_cols=259 Identities=17% Similarity=0.173 Sum_probs=201.1
Q ss_pred ccceecccCceeEEEEEEeC------CCeeEEEEeeccCcc-----------CHHHHHHHHHHHhcCCCCCccceEEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLLT------GPAMVVKRFRQMSNV-----------GKEDFHEHMTRLGSLSHPNLLPLIAFYY 319 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~ 319 (565)
..+.||+|+||+||+|.+.. ++.||||.+...... ....+.+|+..++.++||||+++++++.
T Consensus 39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~ 118 (364)
T 3op5_A 39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL 118 (364)
T ss_dssp EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence 45789999999999998754 478999998754211 1123455667788889999999999997
Q ss_pred ec----CceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc--C
Q 008431 320 RK----EEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD--N 393 (565)
Q Consensus 320 ~~----~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~ 393 (565)
.. ...++||||+ +|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++ .
T Consensus 119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~----~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 119 HDKNGKSYRFMIMDRF-GSDLQKIYEANAK----RFSRKTVLQLSLRILDILEYIHEH----EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEETTEEEEEEEEECE-EEEHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEESSC
T ss_pred eccCCcceEEEEEeCC-CCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CeEEecCCHHHEEEecCC
Confidence 75 4589999999 9999999986432 499999999999999999999998 999999999999999 8
Q ss_pred CCCcEEeccCCccccccc-----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCC
Q 008431 394 AYEPLLTDYALVPIVNKE-----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKG 462 (565)
Q Consensus 394 ~~~~kl~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~ 462 (565)
++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~--- 266 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK--- 266 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT---
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc---
Confidence 899999999999765432 123489999999999999999999999999999999999999974211
Q ss_pred CCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 463 ANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
......+....... ....++++.+..... ...+.+++..||+.||++|||+.++++.|+++....
T Consensus 267 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 267 -DPKYVRDSKIRYRE-NIASLMDKCFPAANA----PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp -CHHHHHHHHHHHHH-CHHHHHHHHSCTTCC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHhhh-hHHHHHHHhcccccC----HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 11122222222222 223344444322222 236788888999999999999999999999987653
No 54
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3e-43 Score=377.66 Aligned_cols=249 Identities=20% Similarity=0.391 Sum_probs=204.6
Q ss_pred hccceecccCceeEEEEEEeC-CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLLT-GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
...+.||+|+||.||+|.+.. +..||||.++.. ....++|.+|+.+|++++|||||+++++|...+..++||||+++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g 301 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 301 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence 456889999999999999764 789999999754 335678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc--
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH-- 412 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~-- 412 (565)
+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 302 ~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 302 NLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKK----NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp BHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred CHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 99999986432 2489999999999999999999998 99999999999999999999999999998764321
Q ss_pred ---cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 413 ---AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 413 ---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
...+++.|+|||++....++.++|||||||++|||+| |+.||.... ..+.. ..+......
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--------~~~~~-~~~~~~~~~------- 438 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVY-ELLEKDYRM------- 438 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--------GGGHH-HHHHTTCCC-------
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--------HHHHH-HHHHcCCCC-------
Confidence 2234678999999988889999999999999999999 999986321 11111 111111100
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
..+......+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 439 ---~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 439 ---ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred ---CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 0011222467889999999999999999999999998753
No 55
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.4e-43 Score=371.69 Aligned_cols=251 Identities=21% Similarity=0.323 Sum_probs=201.0
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
...+.||+|+||+||+|.+..+..||||+++... ...++|.+|+.+|++++||||+++++++.+ +..++||||+++|+
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gs 264 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCB
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCC
Confidence 3567899999999999998887889999997543 346789999999999999999999999865 77899999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 265 L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~----~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 265 LLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp HHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred HHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 9999975322 1389999999999999999999998 9999999999999999999999999999876432
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....++..|+|||++....++.++|||||||++|||+| |+.||... ...+..... ..+...
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~--------~~~~~~~~i-~~~~~~-------- 400 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------VNREVLDQV-ERGYRM-------- 400 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHH-HTTCCC--------
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC--------CHHHHHHHH-HcCCCC--------
Confidence 12345678999999888899999999999999999999 99998621 122222222 221110
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCC
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDN 534 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~ 534 (565)
..+......+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 401 --~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 401 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 0011223467889999999999999999999999999876543
No 56
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.9e-43 Score=361.92 Aligned_cols=243 Identities=22% Similarity=0.310 Sum_probs=195.7
Q ss_pred cceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 258 AEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
.+.||+|+||.||+|.. .+|..||+|+++.......+.+.+|+.++++++|||||++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999995 46899999999865555667899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE--cCCCCcEEeccCCccccccc---
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL--DNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl--~~~~~~kl~DfGla~~~~~~--- 411 (565)
.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 174 ~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 174 FDRIIDESY----NLTELDTILFMKQICEGIRHMHQM----YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp HHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 999875432 389999999999999999999998 99999999999999 66788999999999876543
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
....||+.|+|||++....++.++|||||||++|||++|+.||.. ......+.......+. ..++...
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~--------~~~~~~~~~i~~~~~~--~~~~~~~-- 313 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG--------DNDAETLNNILACRWD--LEDEEFQ-- 313 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCCC--SCSGGGT--
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhccCC--CChhhhc--
Confidence 234689999999999888999999999999999999999999962 2222333333332211 1111111
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.....+.+++.+||+.||++|||+.|+++
T Consensus 314 ----~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 314 ----DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11236788999999999999999999987
No 57
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=349.59 Aligned_cols=265 Identities=20% Similarity=0.305 Sum_probs=208.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecC--ceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE--EKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~E~~~ 332 (565)
..++||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 3578999999999999965 58999999997533 344677899999999999999999999998765 6799999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE----cCCCCcEEeccCCcccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL----DNAYEPLLTDYALVPIV 408 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DfGla~~~ 408 (565)
+|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 93 ~~~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 93 CGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLREN----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp TCBHHHHHHSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCHHHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC----CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999865432 2389999999999999999999998 99999999999999 88888999999999876
Q ss_pred ccc---ccccccccccCCCccC--------CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh
Q 008431 409 NKE---HAQLHMVAYKSPEFNQ--------TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE 477 (565)
Q Consensus 409 ~~~---~~~~~t~~y~aPE~~~--------~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 477 (565)
... ....+|+.|+|||++. ...++.++|||||||++|||+||+.||..... .......+......
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG----PRRNKEVMYKIITG 242 (319)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTC----GGGCHHHHHHHHHH
T ss_pred CCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCc----cchhHHHHHHHhcC
Confidence 543 2446889999999865 56789999999999999999999999974221 12223333333322
Q ss_pred ccc---Ccc---------ccccccC-CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 478 EWT---GEV---------FDKDMRG-TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 478 ~~~---~~~---------~d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
... ..+ ..+.+.. ..........+.+++.+||+.||++|||++|+++...+..-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 110 000 0011111 11234566678899999999999999999999999887643
No 58
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.4e-43 Score=362.29 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=192.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..++||+|+||+||+|+.. +++.||+|+++... ....+.+.+|..++.++ +|||||++++++.+.+..|+||||+
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 4578999999999999965 57889999997532 22335688899999876 8999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc-
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK- 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~- 410 (565)
++|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 136 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 136 NGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp TTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 9999999998654 399999999999999999999998 999999999999999999999999999976322
Q ss_pred ---cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 ---EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||................+......... .
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 280 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 280 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC------C
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc------C
Confidence 2345789999999999999999999999999999999999999963221111111122222222222111 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL 519 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 519 (565)
+ +......+.+++.+||+.||++||++
T Consensus 281 ~-----p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 I-----PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp C-----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred C-----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 11122367888999999999999985
No 59
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-43 Score=364.74 Aligned_cols=255 Identities=20% Similarity=0.268 Sum_probs=202.3
Q ss_pred hccceecccCceeEEEEEEe------CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCc-eEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEE-KLL 326 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~-~~l 326 (565)
...+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|+++++++ +|||||++++++.+.+. .++
T Consensus 25 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~i 104 (359)
T 3vhe_A 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104 (359)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEE
T ss_pred eeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEE
Confidence 35678999999999999843 34689999997532 23346799999999999 79999999999987654 899
Q ss_pred EEeccCCCCHHHHHhhcCCCC-----------------------------------------------------------
Q 008431 327 VSDFVPNGSLANLLHVRRAPG----------------------------------------------------------- 347 (565)
Q Consensus 327 v~E~~~~gsL~~~l~~~~~~~----------------------------------------------------------- 347 (565)
||||+++|+|.+++.......
T Consensus 105 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (359)
T 3vhe_A 105 IVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPED 184 (359)
T ss_dssp EEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------C
T ss_pred EEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccc
Confidence 999999999999998654210
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc------cccccccc
Q 008431 348 --QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE------HAQLHMVA 419 (565)
Q Consensus 348 --~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~------~~~~~t~~ 419 (565)
...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....+|+.
T Consensus 185 ~~~~~l~~~~~~~~~~ql~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 185 LYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp TTTTCBCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred hhccccCHHHHHHHHHHHHHHHHHHHHC----CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 11288999999999999999999998 9999999999999999999999999999765332 23456788
Q ss_pred ccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHH
Q 008431 420 YKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEM 498 (565)
Q Consensus 420 y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 498 (565)
|+|||++.+..++.++|||||||++|||+| |+.||... .....+........... . +....
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~~~~~~~~~~-----~-----~~~~~ 322 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------KIDEEFCRRLKEGTRMR-----A-----PDYTT 322 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC--------CCSHHHHHHHHHTCCCC-----C-----CTTCC
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc--------chhHHHHHHHHcCCCCC-----C-----CCCCC
Confidence 999999988899999999999999999999 99999631 11122222222221111 0 01112
Q ss_pred HHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 499 LKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 499 ~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 3678889999999999999999999999998754
No 60
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.5e-43 Score=347.96 Aligned_cols=249 Identities=20% Similarity=0.350 Sum_probs=191.2
Q ss_pred hccceecccCceeEEEEEEeC----CCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 256 ASAEVLGSGSFGSSYKAVLLT----GPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
...+.||+|+||+||+|.... +..||+|.+.... ....+.+.+|+.++++++||||+++++++ ..+..++||||
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 96 (281)
T 1mp8_A 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMEL 96 (281)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred EEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEec
Confidence 356789999999999998643 3468999886532 33456799999999999999999999997 45678999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 97 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 97 CTLGELRSFLQVRKY----SLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp CTTEEHHHHHHHTTT----TSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred CCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999986542 389999999999999999999998 999999999999999999999999999977643
Q ss_pred cc-----cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccc
Q 008431 411 EH-----AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVF 484 (565)
Q Consensus 411 ~~-----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (565)
.. ...+++.|+|||++....++.++|||||||++|||++ |+.||..... ... ........ ..
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~---~~~i~~~~-~~--- 236 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDV---IGRIENGE-RL--- 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGH---HHHHHTTC-CC---
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHH---HHHHHcCC-CC---
Confidence 32 2345678999999888889999999999999999997 9999863211 111 11111111 00
Q ss_pred cccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 485 DKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 485 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
.. +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 237 --~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 237 --PM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp --CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 01 111224678899999999999999999999999998653
No 61
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.5e-42 Score=357.59 Aligned_cols=245 Identities=21% Similarity=0.259 Sum_probs=198.4
Q ss_pred hccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 256 ASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++|||||++++++.+.+..|+||||++
T Consensus 32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 111 (362)
T 2bdw_A 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 111 (362)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 35678999999999999964 68899999997532 2334678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC---CCcEEeccCCccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA---YEPLLTDYALVPIVN 409 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DfGla~~~~ 409 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus 112 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 112 GGELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp SCBHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999997543 389999999999999999999998 99999999999999865 459999999998765
Q ss_pred cc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 410 KE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 410 ~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
.. ....||+.|+|||++.+..++.++|||||||++|||++|++||.. .+............. ....+
T Consensus 183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~--------~~~~~~~~~i~~~~~--~~~~~ 252 (362)
T 2bdw_A 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--------EDQHRLYAQIKAGAY--DYPSP 252 (362)
T ss_dssp TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCC--CCCTT
T ss_pred CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhCCC--CCCcc
Confidence 43 235789999999999998999999999999999999999999962 122222222222111 00011
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 253 EW------DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GG------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cc------cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 1112467889999999999999999998764
No 62
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.6e-43 Score=355.16 Aligned_cols=239 Identities=18% Similarity=0.242 Sum_probs=195.5
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|.. .+++.||+|++... .......+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 357899999999999995 57899999998742 1233457899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 92 GGELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRH----KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH----TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 789999987654 389999999999999999999999 9999999999999999999999999999876543
Q ss_pred --ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... ....+.....
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----------------~~~~i~~~~~ 225 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-----------------LFKKVNSCVY 225 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----------------CBCCCCSSCC
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----------------HHHHHHcCCC
Confidence 34578999999999988776 789999999999999999999997321100 0001100000
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. .+......+.+++.+||+.||++|||+.|+++.
T Consensus 226 ~---~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 226 V---MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp C---CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred C---CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0 011122467889999999999999999999764
No 63
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=365.91 Aligned_cols=244 Identities=20% Similarity=0.228 Sum_probs=197.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|.. .+|+.+|+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..|+||||+++
T Consensus 15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 457899999999999985 478899999987533 23345789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc---CCCCcEEeccCCcccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DfGla~~~~~ 410 (565)
|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 95 g~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~----givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 95 GELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQM----GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 99999998654 389999999999999999999998 999999999999998 467899999999977654
Q ss_pred c----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 411 E----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 411 ~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
. ....||+.|+|||++.+..|+.++||||+||++|||++|++||.. .+............. ....+
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~--------~~~~~~~~~i~~~~~--~~~~~ 235 (444)
T 3soa_A 166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--------EDQHRLYQQIKAGAY--DFPSP 235 (444)
T ss_dssp TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTCC--CCCTT
T ss_pred CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC--------ccHHHHHHHHHhCCC--CCCcc
Confidence 3 234789999999999998999999999999999999999999962 122222222222211 11111
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
... .....+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~------~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWD------TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTT------TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccc------cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111 112367888999999999999999999873
No 64
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=360.36 Aligned_cols=239 Identities=22% Similarity=0.228 Sum_probs=194.8
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..++||+|+||+||+|+.. +++.||||+++.. .....+.+.+|..+++.+ +||||+++++++.+.+..|+||||+
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 106 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV 106 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence 4578999999999999964 6899999999753 233456788999999988 6999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 107 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 107 NGGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDK----GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 9999999998654 389999999999999999999998 9999999999999999999999999999764322
Q ss_pred ----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....||+.|+|||++.+..|+.++|||||||++|||++|+.||.. .+.............. .|
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--------~~~~~~~~~i~~~~~~----~p- 244 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA--------ENEDDLFEAILNDEVV----YP- 244 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCC----CC-
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCCC----CC-
Confidence 345689999999999888899999999999999999999999962 2223333333222110 00
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCH------HHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL------REAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~------~evl~ 524 (565)
......+.+++.+||+.||++||++ .|+++
T Consensus 245 -------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 245 -------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1112367788899999999999998 67654
No 65
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=9.1e-43 Score=344.21 Aligned_cols=244 Identities=24% Similarity=0.374 Sum_probs=188.2
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC----ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS----NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|.. .+..||||.++... ....+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 357899999999999996 58899999986432 2234679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC---CccCCCCCCCEEEcC--------CCCcEEec
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT---LPHGHLKSSNVLLDN--------AYEPLLTD 401 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~---ivHrDlkp~NILl~~--------~~~~kl~D 401 (565)
+|+|.+++... .+++..+..++.|++.||.|||+. + |+||||||+|||++. ++.+||+|
T Consensus 90 ~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~----~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 90 GGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDE----AIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp TEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHS----SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred CCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC----CCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999998532 389999999999999999999998 6 899999999999986 77899999
Q ss_pred cCCccccccc--ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcc
Q 008431 402 YALVPIVNKE--HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479 (565)
Q Consensus 402 fGla~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (565)
||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|+.||... ..............
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~~ 231 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--------DGLAVAYGVAMNKL 231 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTS--------CHHHHHHHHHTSCC
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHhhhcCCC
Confidence 9999765433 3456889999999998888999999999999999999999999631 11111111111111
Q ss_pred cCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHh
Q 008431 480 TGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMEL 529 (565)
Q Consensus 480 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 529 (565)
. ... +......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 232 ~-----~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 232 A-----LPI-----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp C-----CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred C-----CCC-----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0 011 111224688899999999999999999999999864
No 66
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.4e-43 Score=344.01 Aligned_cols=248 Identities=23% Similarity=0.320 Sum_probs=200.3
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEec--CceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--EEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|+. ++..||||.+.... ....+.|.+|+.++++++||||+++++++.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 457899999999999997 48899999987532 33356799999999999999999999999876 67899999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--CccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT--LPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+|+|.+++..... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++....
T Consensus 93 ~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 93 YGSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLHTL----EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp TCBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHTTS----SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred CCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhcC----CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 9999999986432 2489999999999999999999997 6 9999999999999999999999998875432
Q ss_pred cccccccccccCCCccCCCCCCc---chhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 EHAQLHMVAYKSPEFNQTDGVTR---KTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ~~~~~~t~~y~aPE~~~~~~~~~---~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....+|+.|+|||++.+..++. ++|||||||++|||+||+.||.. ................ +.
T Consensus 165 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~--------~~~~~~~~~~~~~~~~-----~~ 231 (271)
T 3kmu_A 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD--------LSNMEIGMKVALEGLR-----PT 231 (271)
T ss_dssp CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT--------SCHHHHHHHHHHSCCC-----CC
T ss_pred ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc--------cChHHHHHHHHhcCCC-----CC
Confidence 23457789999999887665544 89999999999999999999962 1222222222222211 11
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
+. ......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 232 ~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 232 IP-----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11 1122367888999999999999999999999999865
No 67
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-44 Score=362.06 Aligned_cols=255 Identities=21% Similarity=0.309 Sum_probs=185.0
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhc--CCCCCccceEEEEEecC----ceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS--LSHPNLLPLIAFYYRKE----EKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~E~ 330 (565)
..+.||+|+||+||+|+. +++.||||++.. .....+.+|.+++.. ++||||+++++++.... ..++||||
T Consensus 7 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 82 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp CCEEEEECSSSEEEEC-C-TTSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred ehhhccCCCCeEEEEEEE-cCcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEec
Confidence 457899999999999986 589999999864 335677888888887 79999999999998876 78999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY--------KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH--------~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+||
T Consensus 83 ~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~----~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 83 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP----AIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp CTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred cCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC----CEeeCcCCHHHeEECCCCCEEEeec
Confidence 9999999999653 2788889999999999999999 65 8999999999999999999999999
Q ss_pred CCcccccccc--------cccccccccCCCccCCC------CCCcchhHHHHHHHHHHHHcC----------CCCccccc
Q 008431 403 ALVPIVNKEH--------AQLHMVAYKSPEFNQTD------GVTRKTDVWSLGILILELLTG----------KFPANYLA 458 (565)
Q Consensus 403 Gla~~~~~~~--------~~~~t~~y~aPE~~~~~------~~~~~~DvwS~Gvil~el~tg----------~~p~~~~~ 458 (565)
|+++...... ...||+.|+|||++.+. .++.++|||||||++|||+|| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654332 22689999999988765 344689999999999999999 55654322
Q ss_pred cCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 459 QGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..... ........... ...+..............+.+++.+||+.||++|||+.||++.|+++....
T Consensus 233 ~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSDPS---VEEMRKVVCEQ-----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CCC---CC-CHHHHTTS-----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCcc---HHHHHHHHHHh-----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 11111 11111111111 111111111112356678999999999999999999999999999987653
No 68
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.8e-42 Score=345.20 Aligned_cols=247 Identities=22% Similarity=0.393 Sum_probs=195.9
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccC-------HHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVG-------KEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 328 (565)
..+.||+|+||+||+|.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++.+. .++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~lv~ 100 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--PRMVM 100 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--TEEEE
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--CeEEE
Confidence 457899999999999996 478899999986432211 16789999999999999999999998544 47999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--CccCCCCCCCEEEcCCCC-----cEEec
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT--LPHGHLKSSNVLLDNAYE-----PLLTD 401 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~-----~kl~D 401 (565)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. + |+||||||+|||++.++. +||+|
T Consensus 101 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~----~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 101 EFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQNQ----NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp ECCTTCBHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHTS----SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred EecCCCCHHHHHhcccC----CccHHHHHHHHHHHHHHHHHHHhC----CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 99999999999875443 499999999999999999999998 7 999999999999988776 99999
Q ss_pred cCCccccccc-ccccccccccCCCcc--CCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc
Q 008431 402 YALVPIVNKE-HAQLHMVAYKSPEFN--QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 402 fGla~~~~~~-~~~~~t~~y~aPE~~--~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
||+++..... ....+|+.|+|||++ ....++.++|||||||++|||++|+.||.... ..-..+........
T Consensus 173 fg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~ 246 (287)
T 4f0f_A 173 FGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS------YGKIKFINMIREEG 246 (287)
T ss_dssp CTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC------CCHHHHHHHHHHSC
T ss_pred CCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc------ccHHHHHHHHhccC
Confidence 9999765443 345688999999988 44567899999999999999999999996321 11122222222221
Q ss_pred ccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHh
Q 008431 479 WTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMEL 529 (565)
Q Consensus 479 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i 529 (565)
.. +.+. ......+.+++.+||+.||++|||+.|+++.|+++
T Consensus 247 ~~-----~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 LR-----PTIP-----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CC-----CCCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CC-----CCCC-----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 1111 11224688899999999999999999999999864
No 69
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-42 Score=357.02 Aligned_cols=247 Identities=17% Similarity=0.263 Sum_probs=197.7
Q ss_pred hccceecccCceeEEEEEE-eCCCeeEEEEeecc-----CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 256 ASAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM-----SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
...+.||+|+||+||+|.. .+++.||||.+... .....+.+.+|+.+++.++|||||++++++.+.+..|+|||
T Consensus 27 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 106 (351)
T 3c0i_A 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106 (351)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 4568899999999999995 47899999998632 12246789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC---cEEeccCCcc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE---PLLTDYALVP 406 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DfGla~ 406 (565)
|+++|+|.+++...... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 107 ~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~----~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 107 FMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHDN----NIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp CCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred CCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 99999999888654321 12489999999999999999999998 9999999999999986654 9999999997
Q ss_pred ccccc----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 407 IVNKE----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 407 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
..... ....||+.|+|||++.+..++.++|||||||++|||++|+.||... -.............
T Consensus 182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~---------~~~~~~~i~~~~~~-- 250 (351)
T 3c0i_A 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT---------KERLFEGIIKGKYK-- 250 (351)
T ss_dssp ECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS---------HHHHHHHHHHTCCC--
T ss_pred EecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc---------HHHHHHHHHcCCCC--
Confidence 76543 2346899999999999989999999999999999999999999621 11122222211110
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.++.... .....+.+++.+||+.||++|||+.|+++
T Consensus 251 -~~~~~~~-----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 -MNPRQWS-----HISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -CCHHHHT-----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCccccc-----cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0110000 11236788999999999999999999986
No 70
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.4e-43 Score=352.84 Aligned_cols=254 Identities=20% Similarity=0.312 Sum_probs=203.6
Q ss_pred hccceecccCceeEEEEEEe------CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 328 (565)
...+.||+|+||.||+|... ++..||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEE
Confidence 35678999999999999852 34789999987532 334567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhcCCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCE
Q 008431 329 DFVPNGSLANLLHVRRAP-------------------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNV 389 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NI 389 (565)
||+++|+|.+++...... ....+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dikp~NI 181 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM----KLVHRDLAARNI 181 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC----CCcccccchheE
Confidence 999999999999865431 112388999999999999999999998 999999999999
Q ss_pred EEcCCCCcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCC
Q 008431 390 LLDNAYEPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKG 462 (565)
Q Consensus 390 Ll~~~~~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~ 462 (565)
+++.++.+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--- 258 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--- 258 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG---
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 9999999999999999765432 22345678999999888889999999999999999999 9999863211
Q ss_pred CCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 463 ANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+.. ........ .. +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 259 --~~~~~----~~~~~~~~-----~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 --ERLFN----LLKTGHRM-----ER-----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp --GGHHH----HHHTTCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --HHHHH----HhhcCCcC-----CC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 11111 11111110 00 111224688899999999999999999999999998653
No 71
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=351.22 Aligned_cols=239 Identities=20% Similarity=0.267 Sum_probs=199.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|+.. +|+.||+|.++.. .....+.+.+|+.+++.++||||+++++++.+.+..|+||||++
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~ 89 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence 4578999999999999964 7899999999753 12345678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 90 GGELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSK----DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp SCBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 999999998643 389999999999999999999998 9999999999999999999999999999876543
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+............. ...
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~--------~~~~~~~~~i~~~~~-------~~p-- 223 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD--------SNTMKTYEKILNAEL-------RFP-- 223 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHCCC-------CCC--
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCC-------CCC--
Confidence 355789999999999999999999999999999999999999962 222233333322210 010
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRW-----DLREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~ 524 (565)
......+.+++.+||+.||++|| +++|+++
T Consensus 224 ---~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 224 ---PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11123677888899999999999 8888874
No 72
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1e-42 Score=353.16 Aligned_cols=255 Identities=20% Similarity=0.297 Sum_probs=192.5
Q ss_pred hccceecccCceeEEEEEEeC-CC---eeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCce-----
Q 008431 256 ASAEVLGSGSFGSSYKAVLLT-GP---AMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEK----- 324 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----- 324 (565)
...+.||+|+||+||+|.... +. .||||.++.. .....+.+.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPI 105 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------C
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCc
Confidence 346789999999999998543 32 7999998753 234457899999999999999999999999876654
Q ss_pred -EEEEeccCCCCHHHHHhhcCCCC-CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 325 -LLVSDFVPNGSLANLLHVRRAPG-QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 325 -~lv~E~~~~gsL~~~l~~~~~~~-~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
++||||+++|+|.+++....... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR----NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC----CcccCCCCcceEEEcCCCCEEEeec
Confidence 99999999999999997544221 22489999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHh
Q 008431 403 ALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 403 Gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
|+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... .........
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--------~~~~~~~~~ 253 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE--------NAEIYNYLI 253 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------GGGHHHHHH
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC--------hHHHHHHHh
Confidence 999765432 12345678999999988899999999999999999999 999986321 111222221
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..... ..+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 254 ~~~~~-----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 254 GGNRL-----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp TTCCC-----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCCCC-----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11100 001112246888999999999999999999999999997764
No 73
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.1e-42 Score=351.11 Aligned_cols=254 Identities=21% Similarity=0.284 Sum_probs=195.2
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|+..+|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||++ |
T Consensus 25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 103 (311)
T 3niz_A 25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-K 103 (311)
T ss_dssp EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-E
T ss_pred hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-C
Confidence 347899999999999998889999999987432 2234678999999999999999999999999999999999998 5
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 104 DLKKVLDENKT----GLQDSQIKIYLYQLLRGVAHCHQH----RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp EHHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 88888875443 489999999999999999999998 9999999999999999999999999999765432
Q ss_pred -ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccc-----
Q 008431 412 -HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVF----- 484 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 484 (565)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.............
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD-----DDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST-----TTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHHCCCChHHhhhhhcc
Confidence 33467899999998765 5689999999999999999999999973221 12222222222111100000
Q ss_pred ----cccccCC-CCC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 485 ----DKDMRGT-KSG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 485 ----d~~~~~~-~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
+...... ... ......+.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 000 011246788999999999999999999975
No 74
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-42 Score=355.24 Aligned_cols=244 Identities=23% Similarity=0.296 Sum_probs=199.6
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc---cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|.. .+++.||||++..... ...+++.+|+.++++++|||||++++++...+..++||||+.
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC
Confidence 457899999999999995 5788999999975322 223578999999999999999999999999999999999997
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH 412 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 412 (565)
|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 138 -g~l~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 208 (348)
T 1u5q_A 138 -GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSH----NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208 (348)
T ss_dssp -EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred -CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence 689888865443 389999999999999999999998 99999999999999999999999999998877777
Q ss_pred cccccccccCCCccC---CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 413 AQLHMVAYKSPEFNQ---TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 413 ~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
...+|+.|+|||++. ...++.++|||||||++|||+||+.||.. ......+........ +...
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~--------~~~~~~~~~~~~~~~------~~~~ 274 (348)
T 1u5q_A 209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--------MNAMSALYHIAQNES------PALQ 274 (348)
T ss_dssp CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT--------SCHHHHHHHHHHSCC------CCCC
T ss_pred cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHHhcCC------CCCC
Confidence 778999999999873 56789999999999999999999999862 122222322222211 1111
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIM 527 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~ 527 (565)
.. .....+.+++.+||+.||++|||+.|+++..-
T Consensus 275 ~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 275 SG----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp CT----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred CC----CCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11 11235778889999999999999999986533
No 75
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=360.16 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=199.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|... +++.||+|.+..........+.+|+.+++.++|||||++++++.+.+..++||||+++|+
T Consensus 55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 4578999999999999964 688999999876544456689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC--CCCcEEeccCCccccccc--
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN--AYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~-- 411 (565)
|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 135 L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 135 LFDRIAAEDY----KMSEAEVINYMRQACEGLKHMHEH----SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp HHHHTTCTTC----CBCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred HHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999865432 489999999999999999999998 9999999999999974 577999999999876543
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+|+.|+|||++.+..++.++|||||||++|||+||+.||.. ......+.......+. .++...
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~--------~~~~~~~~~i~~~~~~---~~~~~~- 274 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG--------EDDLETLQNVKRCDWE---FDEDAF- 274 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHHCCCC---CCSSTT-
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCC---CCcccc-
Confidence 234689999999999999999999999999999999999999962 1222222222222111 111110
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
......+.+++.+||+.||++|||+.|+++.
T Consensus 275 ----~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 275 ----SSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ----ccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1112367889999999999999999999863
No 76
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.6e-42 Score=350.87 Aligned_cols=241 Identities=19% Similarity=0.268 Sum_probs=192.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCc-----------
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEE----------- 323 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----------- 323 (565)
..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+.++++++|||||+++++|.+.+.
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 4578999999999999975 78999999997433 3345789999999999999999999999866432
Q ss_pred ----------------------------------------------eEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHH
Q 008431 324 ----------------------------------------------KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRL 357 (565)
Q Consensus 324 ----------------------------------------------~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~ 357 (565)
.++||||+++|+|.+++...... ...++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL--EDREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG--GGSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc--cchhhHHHH
Confidence 79999999999999999865432 236777899
Q ss_pred HHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----------------cccccccccc
Q 008431 358 KIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----------------HAQLHMVAYK 421 (565)
Q Consensus 358 ~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~----------------~~~~~t~~y~ 421 (565)
.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....+|+.|+
T Consensus 168 ~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 243 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK----GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM 243 (332)
T ss_dssp HHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred HHHHHHHHHHHHHHhC----CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence 9999999999999998 9999999999999999999999999999776433 2235889999
Q ss_pred CCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHH
Q 008431 422 SPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKL 501 (565)
Q Consensus 422 aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 501 (565)
|||++.+..++.++|||||||++|||++|..|+... ...... ......... .......+
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~~~~~-~~~~~~~~~----------~~~~~~~~ 302 (332)
T 3qd2_B 244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VRIITD-VRNLKFPLL----------FTQKYPQE 302 (332)
T ss_dssp CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HHHHHH-HHTTCCCHH----------HHHHCHHH
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HHHHHH-hhccCCCcc----------cccCChhH
Confidence 999999989999999999999999999998875411 111111 111100000 11223466
Q ss_pred HHHHhhccccCcCCCCCHHHHHH
Q 008431 502 LKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 502 ~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+++.+||+.||++|||+.|+++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCCCCcCCCHHHHhh
Confidence 88999999999999999999975
No 77
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-42 Score=347.09 Aligned_cols=257 Identities=21% Similarity=0.281 Sum_probs=196.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||+||+|.. .++.||+|++... ...+.|.+|+.++++++||||+++++++. +..++||||+++|+|
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L 86 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBH
T ss_pred eeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCH
Confidence 457899999999999987 5788999998642 34578999999999999999999999875 558999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC-cEEeccCCccccccc-ccc
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE-PLLTDYALVPIVNKE-HAQ 414 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-~kl~DfGla~~~~~~-~~~ 414 (565)
.+++..... ...+++..++.++.|+++||+|||+.. +.+|+||||||+|||++.++. +||+|||+++..... ...
T Consensus 87 ~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (307)
T 2eva_A 87 YNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQ-PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN 163 (307)
T ss_dssp HHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCS-SSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred HHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCC-CCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccC
Confidence 999975432 124788999999999999999999831 118999999999999998886 799999998765433 345
Q ss_pred cccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCC
Q 008431 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSG 494 (565)
Q Consensus 415 ~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 494 (565)
.+|+.|+|||++.+..++.++|||||||++|||+||+.||.... ............. .. +...
T Consensus 164 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~-~~-----~~~~----- 226 (307)
T 2eva_A 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG------GPAFRIMWAVHNG-TR-----PPLI----- 226 (307)
T ss_dssp -CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC------SSHHHHHHHHHTT-CC-----CCCB-----
T ss_pred CCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC------ccHHHHHHHHhcC-CC-----CCcc-----
Confidence 68999999999999899999999999999999999999996321 1111111111111 11 1111
Q ss_pred HHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCCCCC
Q 008431 495 EGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDNDNED 538 (565)
Q Consensus 495 ~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~~~ 538 (565)
......+.+++.+||+.||++|||+.|+++.|+.+........+
T Consensus 227 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 11123678899999999999999999999999999876544443
No 78
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.2e-42 Score=350.74 Aligned_cols=256 Identities=22% Similarity=0.332 Sum_probs=206.0
Q ss_pred hccceecccCceeEEEEEE------eCCCeeEEEEeeccCc-cCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEE
Q 008431 256 ASAEVLGSGSFGSSYKAVL------LTGPAMVVKRFRQMSN-VGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 327 (565)
...+.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 105 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 105 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEE
Confidence 3567899999999999985 2457899999975432 3456799999999999 999999999999999999999
Q ss_pred EeccCCCCHHHHHhhcCCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC
Q 008431 328 SDFVPNGSLANLLHVRRAP-------------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA 394 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~ 394 (565)
|||+++|+|.+++...... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK----NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEETT
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCccceEEEcCC
Confidence 9999999999999865421 112489999999999999999999998 99999999999999999
Q ss_pred CCcEEeccCCcccccccc------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcch
Q 008431 395 YEPLLTDYALVPIVNKEH------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADL 467 (565)
Q Consensus 395 ~~~kl~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~ 467 (565)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... .
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~ 253 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--------V 253 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--------S
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc--------c
Confidence 999999999997765432 2345678999999888889999999999999999999 999986321 1
Q ss_pred HHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 468 ATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 468 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
...+.......... .. +......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 254 ~~~~~~~~~~~~~~-~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 254 DSKFYKMIKEGFRM-LS---------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp SHHHHHHHHHTCCC-CC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred hhHHHHHhccCCCC-CC---------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 12222222221110 00 0112246788899999999999999999999999987654
No 79
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-42 Score=346.49 Aligned_cols=250 Identities=20% Similarity=0.344 Sum_probs=190.4
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|+. ...||+|+++... ....+.|.+|+.++++++||||+++++++ ..+..++||||++++
T Consensus 28 ~~~~lG~G~~g~Vy~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 28 VGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEECSSEEEEEEES--SSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeEecCCCCeEEEEEEE--cCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 457899999999999974 3459999987432 23346799999999999999999999965 556789999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~lH~~----~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 105 SLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAK----SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred cHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHhC----CcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999965433 499999999999999999999998 9999999999999999999999999998765421
Q ss_pred ---ccccccccccCCCccC---CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 412 ---HAQLHMVAYKSPEFNQ---TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
....+|+.|+|||++. ...++.++|||||||++|||++|+.||... .....+..........
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~--------~~~~~~~~~~~~~~~~---- 244 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI--------NNRDQIIEMVGRGSLS---- 244 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC--------CCHHHHHHHHHHTSCC----
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc--------chHHHHHHHhcccccC----
Confidence 2345789999999876 567889999999999999999999999632 1112222222222111
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
+.+... .......+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 245 ~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLSKV--RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTTSS--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchhhc--cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111110 01222478889999999999999999999999999864
No 80
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-43 Score=361.10 Aligned_cols=252 Identities=25% Similarity=0.365 Sum_probs=193.4
Q ss_pred ccceecccCceeEEEEEEeCC----CeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEe-cCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTG----PAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR-KEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|...+. ..||||.++... ....++|.+|+.++++++||||++++++|.. ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 457899999999999996432 368999886432 3345789999999999999999999999765 4578999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 173 ~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 173 MKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp CTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred CCCCCHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHHC----CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999975433 388999999999999999999998 999999999999999999999999999976532
Q ss_pred c--------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccC
Q 008431 411 E--------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTG 481 (565)
Q Consensus 411 ~--------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (565)
. ....+++.|+|||++.+..++.++|||||||++|||+| |.+||.... ...+...+ ....
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~~---~~~~--- 313 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYL---LQGR--- 313 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHHH---HTTC---
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHHH---HcCC---
Confidence 2 12345678999999988899999999999999999999 677775321 11222211 1111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCC
Q 008431 482 EVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDND 535 (565)
Q Consensus 482 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 535 (565)
....+ ......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 314 ~~~~p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 314 RLLQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp CCCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred CCCCC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 00011 11223678899999999999999999999999999876543
No 81
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-42 Score=343.87 Aligned_cols=254 Identities=23% Similarity=0.316 Sum_probs=200.3
Q ss_pred ccceecccCceeEEEEEEeC-CC---eeEEEEeeccCc-cCHHHHHHHHHHHhcCCCCCccceEEEEEecCce-EEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLT-GP---AMVVKRFRQMSN-VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEK-LLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lv~E~ 330 (565)
..++||+|+||+||+|...+ +. .||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 45789999999999998543 33 689999875332 3456799999999999999999999999876655 999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+.+|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 105 ~~~~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 105 MCHGDLLQFIRSPQR----NPTVKDLISFGLQVARGMEYLAEQ----KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp CTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred ccCCCHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 999999999976432 489999999999999999999998 999999999999999999999999999975532
Q ss_pred c--------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 411 E--------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 411 ~--------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
. ....+++.|+|||.+.+..++.++|||||||++|||+||..|+.... ....+...+ ......
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~----~~~~~~~~~----~~~~~~- 247 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI----DPFDLTHFL----AQGRRL- 247 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS----CGGGHHHHH----HTTCCC-
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC----CHHHHHHHh----hcCCCC-
Confidence 2 23356789999999999999999999999999999999655543111 111111111 111100
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCCC
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDNDN 536 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~ 536 (565)
.. +......+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus 248 ----~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 248 ----PQ-----PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ----CC-----CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 00 1111236788999999999999999999999999998765443
No 82
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.1e-42 Score=354.03 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=192.7
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc---cCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|..+++++ +|||||++++++.+.+..|+||||+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~ 92 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 92 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence 4578999999999999964 688999999975422 2245688999999987 8999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc-
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK- 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~- 410 (565)
++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 93 NGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHER----GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999998654 389999999999999999999998 999999999999999999999999999976322
Q ss_pred ---cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 ---EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||................+......... .
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~------~ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI------R 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC------C
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC------C
Confidence 2345789999999999999999999999999999999999999963221111001112222222222111 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL 519 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 519 (565)
+. ......+.+++.+||+.||++||++
T Consensus 238 ~p-----~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 IP-----RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CC-----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CC-----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11 1112367888999999999999995
No 83
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.3e-42 Score=344.75 Aligned_cols=251 Identities=20% Similarity=0.304 Sum_probs=193.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|...+|+.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 357899999999999998889999999996432 23346789999999999999999999999999999999999985
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 85 DLKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDR----RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp EHHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred CHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 99999875432 489999999999999999999998 9999999999999999999999999998765422
Q ss_pred -ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh---hc----cc--
Q 008431 412 -HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR---EE----WT-- 480 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~----~~-- 480 (565)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||... ........... .. +.
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV--------SEADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHHCCCChhhchhh
Confidence 23467899999998865 45899999999999999999999999632 11111211111 00 00
Q ss_pred --CccccccccCCC------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 481 --GEVFDKDMRGTK------SGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 481 --~~~~d~~~~~~~------~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
...+++...... ........+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000111111000 00112246778999999999999999999875
No 84
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.5e-42 Score=353.96 Aligned_cols=239 Identities=18% Similarity=0.215 Sum_probs=199.6
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|+.. +|+.||+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..|+||||++
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 4578999999999999964 7899999999743 22345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 125 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 125 GGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSL----DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp TCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 999999998654 389999999999999999999998 9999999999999999999999999999876543
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .............. . .+.
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~-~------~~p-- 258 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA--------DQPIQIYEKIVSGK-V------RFP-- 258 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCC-C------CCC--
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC--------CCHHHHHHHHHcCC-C------CCC--
Confidence 355789999999999999999999999999999999999999962 22223332222221 1 010
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWD-----LREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~ 524 (565)
......+.+++.+||+.||++||+ +.|+++
T Consensus 259 ---~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 259 ---SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 111236788899999999999998 888865
No 85
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=353.58 Aligned_cols=242 Identities=20% Similarity=0.246 Sum_probs=182.5
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|+.. +++.||||.+.... ..+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 134 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE 134 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCC
Confidence 4578999999999999965 57889999997532 35678899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCCccccccc-
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGla~~~~~~- 411 (565)
|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 135 L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 135 LFDRIVEKG-----YYSERDAADAVKQILEAVAYLHEN----GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp HHHHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 999997543 389999999999999999999998 9999999999999975 889999999999876443
Q ss_pred --ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............. ....+..
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~~i~~~~~--~~~~~~~- 275 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER-------GDQFMFRRILNCEY--YFISPWW- 275 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-------CHHHHHHHHHTTCC--CCCTTTT-
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc-------ccHHHHHHHHhCCC--ccCCchh-
Confidence 34568999999999999899999999999999999999999986211 11111222221111 1111111
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
......+.+++.+||+.||++|||+.|+++
T Consensus 276 -----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 276 -----DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -----TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112246788999999999999999999976
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.8e-42 Score=356.11 Aligned_cols=242 Identities=21% Similarity=0.299 Sum_probs=195.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.+++.++|||||+++++|.+.+..|+||||++
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 4578999999999999954 6889999998642 23345688999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 99 GGDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQ----RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp TEEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999997543 399999999999999999999998 9999999999999999999999999999876433
Q ss_pred --ccccccccccCCCccCC---CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 412 --HAQLHMVAYKSPEFNQT---DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~---~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
....||+.|+|||++.. ..|+.++|||||||++|||++|+.||.... ............... .
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-----~~~~~~~~~~~~~~~-~------ 237 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS-----STSSKEIVHTFETTV-V------ 237 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT-----TSCHHHHHHHHHHCC-C------
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCC-----CccHHHHHHHHhhcc-c------
Confidence 35578999999998864 458999999999999999999999996321 112222222221111 0
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCC-HHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWD-LREAVE 524 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-~~evl~ 524 (565)
.. +......+.+++.+||+.||++||+ ++++.+
T Consensus 238 ~~-----p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TY-----PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CC-----CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CC-----CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 00 1111246788899999999999998 666653
No 87
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=355.15 Aligned_cols=256 Identities=21% Similarity=0.283 Sum_probs=201.3
Q ss_pred hccceecccCceeEEEEEEe------CCCeeEEEEeecc-CccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 327 (565)
...+.||+|+||+||+|... ++..||+|.+... .....+.+.+|+.+++++ +||||+++++++...+..++|
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 127 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEE
Confidence 35689999999999999962 3457999999743 233457899999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHHhhcCCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCE
Q 008431 328 SDFVPNGSLANLLHVRRAP------------------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNV 389 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NI 389 (565)
|||+++|+|.+++...... ....+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 128 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NI 203 (344)
T 1rjb_A 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK----SCVHRDLAARNV 203 (344)
T ss_dssp EECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT----TEEETTCSGGGE
T ss_pred EecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCChhhE
Confidence 9999999999999865421 012389999999999999999999998 999999999999
Q ss_pred EEcCCCCcEEeccCCcccccccc------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCC
Q 008431 390 LLDNAYEPLLTDYALVPIVNKEH------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKG 462 (565)
Q Consensus 390 Ll~~~~~~kl~DfGla~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~ 462 (565)
|++.++.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---- 279 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP---- 279 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC----
Confidence 99999999999999997654332 2345678999999888889999999999999999998 999996321
Q ss_pred CCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 463 ANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
....+.......... .. +......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 280 ----~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 ----VDANFYKLIQNGFKM-----DQ-----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp ----CSHHHHHHHHTTCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----cHHHHHHHHhcCCCC-----CC-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 112222222222110 00 0111246788899999999999999999999999987653
No 88
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.1e-42 Score=348.79 Aligned_cols=239 Identities=20% Similarity=0.273 Sum_probs=188.8
Q ss_pred ccceecccCceeEEEEEE----eCCCeeEEEEeeccC----ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL----LTGPAMVVKRFRQMS----NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 328 (565)
..+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+..|+||
T Consensus 21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEE
Confidence 457899999999999996 478999999997532 223456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 101 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~----~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 101 EYLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQK----GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp ECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred eCCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhC----CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 9999999999998654 388999999999999999999998 9999999999999999999999999998754
Q ss_pred ccc----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccc
Q 008431 409 NKE----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVF 484 (565)
Q Consensus 409 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (565)
... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ......+........
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~--------~~~~~~~~~i~~~~~----- 238 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG--------ENRKKTIDKILKCKL----- 238 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHTCC-----
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhCCC-----
Confidence 322 344689999999999888999999999999999999999999962 222223332222210
Q ss_pred cccccCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 008431 485 DKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRW-----DLREAVE 524 (565)
Q Consensus 485 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~ 524 (565)
.+. ......+.+++.+||+.||++|| ++.|+++
T Consensus 239 --~~p-----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 --NLP-----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CCC-----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCC-----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 010 11123678888999999999999 7778765
No 89
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-42 Score=348.06 Aligned_cols=259 Identities=20% Similarity=0.285 Sum_probs=197.2
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcC--CCCCccceEEEEEec----CceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL--SHPNLLPLIAFYYRK----EEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~----~~~~lv~E~ 330 (565)
..+.||+|+||.||+|+. +++.||||++... ....+.+|.+++..+ +||||+++++++... ...++||||
T Consensus 41 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 116 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116 (337)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred EEeEeecCCCeEEEEEEE-CCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence 468999999999999987 4889999998643 234555666666554 899999999999887 678999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----CCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF----PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~----~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
+++|+|.++++.. .+++..+..++.|++.||+|||+.+ +..+|+||||||+|||++.++.+||+|||+++
T Consensus 117 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 117 HENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 9999999999753 3899999999999999999999752 12279999999999999999999999999997
Q ss_pred cccccc--------cccccccccCCCccCCCCCCcc------hhHHHHHHHHHHHHcC----------CCCccccccCCC
Q 008431 407 IVNKEH--------AQLHMVAYKSPEFNQTDGVTRK------TDVWSLGILILELLTG----------KFPANYLAQGKG 462 (565)
Q Consensus 407 ~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~------~DvwS~Gvil~el~tg----------~~p~~~~~~~~~ 462 (565)
...... ...||+.|+|||++.+..++.+ +|||||||++|||+|| +.||.......
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~- 269 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD- 269 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS-
T ss_pred eeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC-
Confidence 654321 3468999999999887766665 9999999999999999 55554322111
Q ss_pred CCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 463 ANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
. ....+........ ..+..............+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 270 --~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 --P-SYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp --C-CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred --C-chhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 1 1111121111111 11111111112356677999999999999999999999999999997653
No 90
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.7e-43 Score=353.80 Aligned_cols=243 Identities=19% Similarity=0.267 Sum_probs=192.7
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|... +++.||||.+.... ....+.+.+|+.+++.++||||+++++++.+.+..|+||||+++|
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~ 90 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence 3578999999999999965 78899999986432 233467899999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 91 ELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGI----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp EGGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999886432 389999999999999999999998 9999999999999999999999999999765322
Q ss_pred ---ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ........... .... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------~~~~~~~~~~~---~~~~-~ 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-------CQEYSDWKEKK---TYLN-P 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-------SHHHHHHHTTC---TTST-T
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-------HHHHHHHhccc---ccCC-c
Confidence 24568999999999877665 77999999999999999999999632110 01111111110 0000 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~------~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 W------KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp G------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred c------ccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 1122367789999999999999999999764
No 91
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.3e-42 Score=344.11 Aligned_cols=254 Identities=16% Similarity=0.165 Sum_probs=203.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|.. .+++.||||.+.... ..+.+.+|+..++.+ +|+|++++++++......++||||+ +|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 90 (298)
T 1csn_A 14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP 90 (298)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CC
Confidence 357899999999999995 578899999986432 344688999999999 7999999999999999999999999 99
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC-----cEEeccCCccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE-----PLLTDYALVPIVN 409 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DfGla~~~~ 409 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 91 ~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 91 SLEDLLDLCGR----KFSVKTVAMAAKQMLARVQSIHEK----SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp BHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred CHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999986533 389999999999999999999998 9999999999999987776 9999999997654
Q ss_pred cc-----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc
Q 008431 410 KE-----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 410 ~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~ 237 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA-----ATNKQKYERIGEKK 237 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS-----CCHHHHHHHHHHHH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc-----cccHHHHHHHHhhc
Confidence 32 234578999999999999999999999999999999999999974221 11222222221111
Q ss_pred ccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 479 WTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 479 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.... .+.+.. .....+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 238 ~~~~--~~~~~~-----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 238 QSTP--LRELCA-----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHSC--HHHHTT-----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cCcc--HHHHHh-----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 0000 000100 11236888999999999999999999999999998654
No 92
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.7e-42 Score=350.88 Aligned_cols=256 Identities=20% Similarity=0.305 Sum_probs=204.3
Q ss_pred hhccceecccCceeEEEEEE--------eCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCce
Q 008431 255 RASAEVLGSGSFGSSYKAVL--------LTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEK 324 (565)
Q Consensus 255 ~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 324 (565)
+...+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+..
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 116 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 116 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCC
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCce
Confidence 34568899999999999986 356789999997532 23356789999999999 899999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC
Q 008431 325 LLVSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN 393 (565)
Q Consensus 325 ~lv~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 393 (565)
++||||+++|+|.+++......+ ...+++..++.++.|++.||.|||+. +|+||||||+|||++.
T Consensus 117 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ----KCIHRDLAARNVLVTE 192 (334)
T ss_dssp EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECT
T ss_pred EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCccceEEEcC
Confidence 99999999999999998654311 12489999999999999999999998 9999999999999999
Q ss_pred CCCcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcc
Q 008431 394 AYEPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANAD 466 (565)
Q Consensus 394 ~~~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~ 466 (565)
++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||+| |+.||.. ..
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~--------~~ 264 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG--------IP 264 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT--------CC
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc--------CC
Confidence 999999999999765432 22345678999999888889999999999999999999 9999862 12
Q ss_pred hHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 467 LATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
........ ....... . +......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 265 ~~~~~~~~-~~~~~~~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 265 VEELFKLL-KEGHRMD-----K-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHHHHHH-HHTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hcCCCCC-----C-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 22222222 2211100 1 0112236788999999999999999999999999997654
No 93
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-42 Score=355.20 Aligned_cols=238 Identities=20% Similarity=0.251 Sum_probs=195.7
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||.||+|+.. +|+.||+|+++... ....+.+..|..++..+ +||||+++++++.+.+..|+||||+
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 100 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 100 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 4578999999999999964 68899999997532 33456788899999876 8999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc-
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK- 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~- 410 (565)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 101 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 101 NGGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSK----GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp TTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 9999999998654 389999999999999999999998 999999999999999999999999999976432
Q ss_pred ---cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 ---EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+............ +.
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~-------~~ 236 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG--------QDEEELFHSIRMDN-------PF 236 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCC-------CC
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC--------CCHHHHHHHHHhCC-------CC
Confidence 2345789999999999999999999999999999999999999962 22222222222211 11
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHH-HHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLR-EAV 523 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~-evl 523 (565)
.. ......+.+++.+||+.||++||++. |+.
T Consensus 237 ~p-----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 YP-----RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC-----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC-----cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 11123678889999999999999997 664
No 94
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=346.59 Aligned_cols=240 Identities=18% Similarity=0.224 Sum_probs=187.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc--------------------------cCHHHHHHHHHHHhcCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN--------------------------VGKEDFHEHMTRLGSLSHP 309 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~ 309 (565)
..+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|++++++++||
T Consensus 17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 96 (298)
T 2zv2_A 17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP 96 (298)
T ss_dssp EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence 357899999999999995 4688999999864321 1135689999999999999
Q ss_pred CccceEEEEEe--cCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCC
Q 008431 310 NLLPLIAFYYR--KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSS 387 (565)
Q Consensus 310 niv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~ 387 (565)
||+++++++.+ .+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~ 166 (298)
T 2zv2_A 97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQ----KIIHRDIKPS 166 (298)
T ss_dssp TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGG
T ss_pred CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHH
Confidence 99999999987 5678999999999999875432 2499999999999999999999998 9999999999
Q ss_pred CEEEcCCCCcEEeccCCccccccc----ccccccccccCCCccCCCC---CCcchhHHHHHHHHHHHHcCCCCccccccC
Q 008431 388 NVLLDNAYEPLLTDYALVPIVNKE----HAQLHMVAYKSPEFNQTDG---VTRKTDVWSLGILILELLTGKFPANYLAQG 460 (565)
Q Consensus 388 NILl~~~~~~kl~DfGla~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~DvwS~Gvil~el~tg~~p~~~~~~~ 460 (565)
|||++.++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~---- 242 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD---- 242 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC----
T ss_pred HEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC----
Confidence 999999999999999999765433 3456899999999887655 37889999999999999999999962
Q ss_pred CCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 461 KGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.....+........ .. .+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 243 ----~~~~~~~~~~~~~~-~~---~~~~------~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ----ERIMCLHSKIKSQA-LE---FPDQ------PDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ----SSHHHHHHHHHHCC-CC---CCSS------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----ccHHHHHHHHhccc-CC---CCCc------cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 12222222222111 10 0100 011236788899999999999999999865
No 95
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.4e-42 Score=344.34 Aligned_cols=250 Identities=20% Similarity=0.385 Sum_probs=204.4
Q ss_pred hccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
...+.||+|+||+||+|... ++..||+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 94 (288)
T 3kfa_A 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 94 (288)
T ss_dssp EEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred eEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCC
Confidence 34578999999999999965 4788999998753 334678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc--
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH-- 412 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~-- 412 (565)
+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~L~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 167 (288)
T 3kfa_A 95 NLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKK----NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 167 (288)
T ss_dssp EHHHHHHHCCT---TTSCHHHHHHHHHHHHHHHHHHHHH----TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred cHHHHHHhccc---CCccHhHHHHHHHHHHHHHHHHHHC----CccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence 99999986433 2489999999999999999999999 99999999999999999999999999998765332
Q ss_pred ---cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 413 ---AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 413 ---~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ........ ..... ...
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--------~~~~~~~~-~~~~~-----~~~ 233 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--------LSQVYELL-EKDYR-----MER 233 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------GGGHHHHH-HTTCC-----CCC
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-hccCC-----CCC
Confidence 2345678999999988889999999999999999999 999986321 11111111 11100 000
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
+......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 234 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 111224688899999999999999999999999988654
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.1e-42 Score=346.69 Aligned_cols=258 Identities=19% Similarity=0.301 Sum_probs=187.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|.. .+|+.||+|+++... ....+.+.+|+.++++++||||+++++++...+..++||||++ |
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~ 87 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-N 87 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-C
Confidence 346899999999999995 478999999997533 3345778999999999999999999999999999999999998 6
Q ss_pred CHHHHHhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 335 SLANLLHVRRAP-GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 335 sL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
+|.+++...... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 163 (317)
T 2pmi_A 88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN----KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN 163 (317)
T ss_dssp BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence 999999764321 123489999999999999999999998 9999999999999999999999999999765432
Q ss_pred --ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc----ccC---
Q 008431 412 --HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE----WTG--- 481 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--- 481 (565)
....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+....... +..
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~ 238 (317)
T 2pmi_A 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----EEQLKLIFDIMGTPNESLWPSVTK 238 (317)
T ss_dssp CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCTTTCGGGGG
T ss_pred cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCChhHhhhhhh
Confidence 34467899999998876 4689999999999999999999999963211 11111111111100 000
Q ss_pred -ccccccccCCC--C---------CHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 482 -EVFDKDMRGTK--S---------GEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 482 -~~~d~~~~~~~--~---------~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
....+.+.... . .......+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000000 0 0011236889999999999999999999865
No 97
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.9e-42 Score=352.40 Aligned_cols=252 Identities=15% Similarity=0.139 Sum_probs=203.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|.. .+++.||||.+.... ..+.+.+|+.+++++ +||||+++++++...+..++||||+ +|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GP 89 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CC
Confidence 357899999999999995 578899999987542 234688999999999 9999999999999999999999999 99
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC-----cEEeccCCccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE-----PLLTDYALVPIVN 409 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~-----~kl~DfGla~~~~ 409 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 90 ~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 90 SLEDLFDLCDR----TFSLKTVLMIAIQLISRMEYVHSK----NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp BHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred CHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999986432 499999999999999999999998 9999999999999998887 9999999998653
Q ss_pred cc-----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc
Q 008431 410 KE-----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 410 ~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+...........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~~ 236 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK-----ADTLKERYQKIGDTK 236 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CSSHHHHHHHHHHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc-----cccHHHHHHHHHhhh
Confidence 32 24468899999999999999999999999999999999999997421 122333222222111
Q ss_pred ccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 479 WTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 479 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
.... .+.+.. . ...+.+++..||+.||.+||++.+|.+.|+++...
T Consensus 237 ~~~~--~~~~~~-----~-~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 237 RATP--IEVLCE-----N-FPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHSC--HHHHTT-----T-CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccCC--HHHHhc-----c-ChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 000000 0 11788899999999999999999999999988765
No 98
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=377.35 Aligned_cols=246 Identities=21% Similarity=0.306 Sum_probs=198.7
Q ss_pred eecccCceeEEEEEEe---CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 260 VLGSGSFGSSYKAVLL---TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 260 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 45679999997543 3456789999999999999999999999875 56999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc---
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH--- 412 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~--- 412 (565)
|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 422 L~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~----~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~ 493 (613)
T 2ozo_A 422 LHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEEK----NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY 493 (613)
T ss_dssp HHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred HHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence 9999975432 499999999999999999999998 99999999999999999999999999998764321
Q ss_pred ----cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 413 ----AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 413 ----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
...+++.|+|||++....++.++|||||||++|||+| |+.||... ...+... .+..+....
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--------~~~~~~~-~i~~~~~~~----- 559 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--------KGPEVMA-FIEQGKRME----- 559 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CSHHHHH-HHHTTCCCC-----
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC--------CHHHHHH-HHHcCCCCC-----
Confidence 1234578999999988899999999999999999998 99999732 1122221 222211100
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.+......+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 560 -----~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 560 -----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp -----CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -----CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 01122347888999999999999999999999999986554
No 99
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3e-42 Score=355.20 Aligned_cols=245 Identities=17% Similarity=0.222 Sum_probs=190.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+++.. +++.||+|++.... ...+.+.+|+.+++.++|||||++++++.+.+..++||||+++|+
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~ 102 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGE 102 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCC
Confidence 4578999999999999965 78999999997542 334678999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC--cEEeccCCcccccc---
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE--PLLTDYALVPIVNK--- 410 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DfGla~~~~~--- 410 (565)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++....
T Consensus 103 L~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~----~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 103 LYERICNAG-----RFSEDEARFFFQQLLSGVSYCHSM----QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 999997654 389999999999999999999998 9999999999999987765 99999999874332
Q ss_pred cccccccccccCCCccCCCCCCcc-hhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 411 EHAQLHMVAYKSPEFNQTDGVTRK-TDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 411 ~~~~~~t~~y~aPE~~~~~~~~~~-~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
.....||+.|+|||++.+..++.+ +|||||||++|||++|+.||..... .......+......... +.
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~~~~~~~~~~~~---~~---- 242 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE----PRDYRKTIQRILSVKYS---IP---- 242 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTCCC---CC----
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc----HHHHHHHHHHHhcCCCC---CC----
Confidence 234578999999999888777665 8999999999999999999974221 12223333322222110 00
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.. ......+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~---~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 DD---IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TT---SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred Cc---CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 0112367889999999999999999999875
No 100
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-42 Score=374.37 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=204.3
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
...+.||+|+||+||+|.+..+..||||+++... ...++|.+|+++|++++|||||++++++.+ +..|+||||+++|+
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gs 347 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 347 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCc
Confidence 3567899999999999998888889999997543 346789999999999999999999999865 67899999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 348 L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 348 LLDFLKGETG---KYLRLPQLVDMAAQIASGMAYVERM----NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp HHHHHSHHHH---TTCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred HHHHHhhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 9999975322 1389999999999999999999998 9999999999999999999999999999876432
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....++..|+|||++....++.++|||||||++|||+| |+.||... ...+.... +..+....
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~--------~~~~~~~~-i~~~~~~~------- 484 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM--------VNREVLDQ-VERGYRMP------- 484 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC--------CHHHHHHH-HHTTCCCC-------
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------CHHHHHHH-HHcCCCCC-------
Confidence 22345678999999888899999999999999999999 99998621 12222222 22211100
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.+......+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 485 ---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 485 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 01122246788999999999999999999999999886543
No 101
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.7e-42 Score=351.94 Aligned_cols=248 Identities=23% Similarity=0.369 Sum_probs=194.9
Q ss_pred ccceecccCceeEEEEEEe-CCCe----eEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPA----MVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|... ++.. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 4578999999999999954 5555 6677665322 233456889999999999999999999885 5678999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 96 LPLGSLLDHVRQHRG----ALGPQLLLNWGVQIAKGMYYLEEH----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp CTTCBSHHHHHSSGG----GSCTTHHHHHHHHHHHHHHHHHHT----TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred CCCCCHHHHHHHccc----cCCHHHHHHHHHHHHHHHHHHHhC----CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999976432 388999999999999999999998 999999999999999999999999999987643
Q ss_pred c------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 411 E------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 411 ~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
. ....++..|+|||++.+..++.++|||||||++|||+| |+.||.... ..... ........ .
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------~~~~~-~~~~~~~~--~ 236 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--------LAEVP-DLLEKGER--L 236 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--------TTHHH-HHHHTTCB--C
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC--------HHHHH-HHHHcCCC--C
Confidence 3 22345678999999988889999999999999999999 999997321 11111 11111110 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+. .....+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 237 ~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 237 AQPQ--------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CCCT--------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCCC--------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0010 1112467788899999999999999999999998653
No 102
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.4e-42 Score=340.64 Aligned_cols=245 Identities=22% Similarity=0.292 Sum_probs=192.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|.. .++..+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 457899999999999996 468899999987543 345678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~ 411 (565)
+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 106 ~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 106 ELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQ----HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp BHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred cHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC----CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 999998654211 12499999999999999999999998 99999999999999 45688999999999765433
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+|+.|+|||++. ..++.++|||||||++|||++|+.||.. ................. ....
T Consensus 181 ~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~~---~~~~ 248 (285)
T 3is5_A 181 EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG--------TSLEEVQQKATYKEPNY---AVEC 248 (285)
T ss_dssp ------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCC---CC--
T ss_pred ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC--------CCHHHHHhhhccCCccc---cccc
Confidence 3456789999999875 5689999999999999999999999962 22222222211111100 0000
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. ....+.+++.+||+.||++|||+.|+++
T Consensus 249 --~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 --RP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --Cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 1236778899999999999999999975
No 103
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-42 Score=348.65 Aligned_cols=250 Identities=21% Similarity=0.380 Sum_probs=197.4
Q ss_pred ccceecccCceeEEEEEEeCC-----CeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTG-----PAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|..... ..||+|.++... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 357899999999999986432 359999987532 23355799999999999999999999999998999999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 128 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 128 MENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLANM----NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp CTTEEHHHHHHHTTT----CSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred CCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999976433 389999999999999999999998 999999999999999999999999999977643
Q ss_pred cc-------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 411 EH-------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 411 ~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
.. ...+++.|+|||++....++.++|||||||++|||++ |+.||... .......... .....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~--------~~~~~~~~~~-~~~~~- 269 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL--------SNHEVMKAIN-DGFRL- 269 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHH-TTCCC-
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHH-CCCcC-
Confidence 21 1234678999999988899999999999999999999 99998621 1222222221 11100
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
. .+......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 270 ----~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 270 ----P-----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp ----C-----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred ----C-----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 01112246788999999999999999999999999987654
No 104
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.3e-42 Score=344.35 Aligned_cols=252 Identities=25% Similarity=0.358 Sum_probs=197.4
Q ss_pred ccceecccCceeEEEEEEeCC----CeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEe-cCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTG----PAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR-KEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|....+ ..+|+|.+.... ....+.+.+|+.++++++||||+++++++.. ++..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 457899999999999985422 258888887532 2345679999999999999999999999754 5578999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 109 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~ql~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 109 MKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYLASK----KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp CTTCBHHHHHHCTTC----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred CCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999975432 489999999999999999999998 999999999999999999999999999976543
Q ss_pred c--------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccC
Q 008431 411 E--------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTG 481 (565)
Q Consensus 411 ~--------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (565)
. ....+|+.|+|||.+.+..++.++|||||||++|||++ |.+||.... ...... .......
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~~~---~~~~~~~-- 250 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITV---YLLQGRR-- 250 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----TTTHHH---HHHTTCC--
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----HHHHHH---HHhcCCC--
Confidence 2 22345678999999988899999999999999999999 556664211 111111 1111110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCC
Q 008431 482 EVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDND 535 (565)
Q Consensus 482 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 535 (565)
...+ ......+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 251 -~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 251 -LLQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp -CCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred -CCCC--------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0000 11123688899999999999999999999999999876543
No 105
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.3e-42 Score=341.42 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=193.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc--cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 3578999999999999964 688999999975332 2346789999999999999999999999999999999999975
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 -~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~~----~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 86 -DLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGFCHSR----NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp -EHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred -CHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 66666654332 399999999999999999999998 9999999999999999999999999999765432
Q ss_pred --ccccccccccCCCccCCCC-CCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh---cccC---c
Q 008431 412 --HAQLHMVAYKSPEFNQTDG-VTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE---EWTG---E 482 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~-~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~ 482 (565)
....+|+.|+|||++.+.. ++.++|||||||++|||++|..|+... .+....+...... .... .
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~-------~~~~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG-------NDVDDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC-------SSHHHHHHHHHHHHCCCCTTTCTT
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC-------CCHHHHHHHHHHHhCCCChhhhhh
Confidence 3446789999999887665 899999999999999999998886421 1222222222211 0000 0
Q ss_pred cc-ccccc----------CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VF-DKDMR----------GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~-d~~~~----------~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. .+... ...........+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00 00000 00001122346778999999999999999999875
No 106
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-42 Score=361.74 Aligned_cols=243 Identities=20% Similarity=0.248 Sum_probs=196.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..++||+|+||+||+|+.. +++.||+|++... .....+.+.+|+.+++.++|||||+++++|.+.+..|+||||++
T Consensus 73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 4578999999999999965 6889999998742 12334568899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~----givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSM----GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 99999999753 289999999999999999999998 9999999999999999999999999999776543
Q ss_pred ----ccccccccccCCCccCCCC----CCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDG----VTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~----~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
....||+.|+|||++.... |+.++|||||||++|||+||+.||.. .+................
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~--------~~~~~~~~~i~~~~~~~~- 293 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA--------DSLVGTYSKIMNHKNSLT- 293 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTHHHHCC-
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC--------CChhhHHHHHHhcccccc-
Confidence 2457899999999887655 78999999999999999999999962 223333333332211000
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAER--RWDLREAVEK 525 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~evl~~ 525 (565)
.|.. ......+.+++.+||+.+|.+ ||+++||++.
T Consensus 294 -~p~~------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 294 -FPDD------NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -CCTT------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -CCCc------ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0100 011236778888999999998 9999999864
No 107
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-42 Score=348.76 Aligned_cols=248 Identities=22% Similarity=0.364 Sum_probs=194.1
Q ss_pred ccceecccCceeEEEEEE-eCCCee----EEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAM----VVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|.. .+++.+ |+|.+... .....+.+.+|+.++++++||||+++++++... ..++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEe
Confidence 457899999999999995 455554 66666532 344567899999999999999999999999865 48899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 98 MPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDR----RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp CSSCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred cCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhC----CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999987543 389999999999999999999998 999999999999999999999999999987643
Q ss_pred cc------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 411 EH------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 411 ~~------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
.. ...+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+... +......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~----~~~~~~~-- 238 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSI----LEKGERL-- 238 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHH----HHTTCCC--
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHH----HHcCCCC--
Confidence 21 2345678999999988899999999999999999999 9999973211 111111 1111100
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
..+......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 239 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 --------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 00111223678899999999999999999999999998754
No 108
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.8e-42 Score=352.03 Aligned_cols=239 Identities=20% Similarity=0.224 Sum_probs=196.8
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||+||+|+.. +++.||+|.++.. .....+.+.+|..++..+ +||||+++++++.+.+..|+||||+
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~ 103 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 103 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCC
Confidence 4578999999999999965 5789999999753 234456788999999988 7999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc-
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK- 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~- 410 (565)
++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 104 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 104 NGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 9999999998654 389999999999999999999998 999999999999999999999999999976422
Q ss_pred ---cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 ---EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+............. .
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--------~~~~~~~~~i~~~~~-------~ 239 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--------EDEDELFQSIMEHNV-------A 239 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCC-------C
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC--------CCHHHHHHHHHhCCC-------C
Confidence 2345789999999999999999999999999999999999999962 222233333332211 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWD-----LREAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs-----~~evl~ 524 (565)
. +......+.+++.+||+.||++||+ +.|+++
T Consensus 240 ~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 Y-----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp C-----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred C-----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 0111236788899999999999995 577654
No 109
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.6e-42 Score=350.57 Aligned_cols=246 Identities=17% Similarity=0.295 Sum_probs=179.1
Q ss_pred cceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CCCccceEEEEEecCceEEEEeccCCCC
Q 008431 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
.+.||+|+||+||+|... +++.||||.+... ....+.+|+.+++.+. ||||+++++++.+....|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 368999999999999964 6889999998642 3567889999999997 9999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC---CcEEeccCCccccccc-
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY---EPLLTDYALVPIVNKE- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl~DfGla~~~~~~- 411 (565)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 93 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 93 LFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDV----GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp HHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 999998653 399999999999999999999998 999999999999997665 8999999999765433
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ................. ...+..
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~--~~~~~~ 240 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFS--FEGEAW 240 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCC--CCSHHH
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCC--CCcccc
Confidence 344678999999999999999999999999999999999999974322111 11222222222211110 000000
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
......+.+++.+||+.||++|||+.|+++
T Consensus 241 ------~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 ------KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp ------HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ------cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 111246788999999999999999999864
No 110
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.8e-42 Score=365.81 Aligned_cols=239 Identities=20% Similarity=0.237 Sum_probs=189.4
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.+++.++||||++++++|...+..++||||++
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 457899999999999995 47889999999743 23344578899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK-EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~-~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
+|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++.....
T Consensus 232 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~----giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 232 GGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEK----NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp SCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHT----CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcC----CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 999999997654 38999999999999999999998 6 8999999999999999999999999999764322
Q ss_pred ----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ............... .
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--------~~~~~~~~~i~~~~~-------~ 367 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--------QDHEKLFELILMEEI-------R 367 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCC-------C
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC--------CCHHHHHHHHHhCCC-------C
Confidence 345689999999999999999999999999999999999999962 222223322222211 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRW-----DLREAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~ 524 (565)
.. ......+.+++.+||+.||++|| |+.|+++
T Consensus 368 ~p-----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 FP-----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC-----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00 11123678889999999999999 9999975
No 111
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.9e-42 Score=345.22 Aligned_cols=256 Identities=21% Similarity=0.281 Sum_probs=199.6
Q ss_pred ccceecccCceeEEEEEE-----eCCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEec--CceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-----LTGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--EEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 328 (565)
..+.||+|+||.||+|.+ .+++.||+|++... .....+.+.+|+.++++++||||+++++++... ...++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 457899999999999984 36789999999743 334457899999999999999999999999876 6689999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 105 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLGSR----QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp ECCTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EeCCCCcHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHhhcC----CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999976543 389999999999999999999998 9999999999999999999999999999766
Q ss_pred ccc-------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccC------CCCCcchHHHHHHHh
Q 008431 409 NKE-------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQG------KGANADLATWVNSVV 475 (565)
Q Consensus 409 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~~ 475 (565)
... ....+|..|+|||++.+..++.++|||||||++|||+||..|+...... ..........+....
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 433 2335677899999998888999999999999999999999986421100 000000111111111
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhh
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELK 530 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~ 530 (565)
..... ...+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 257 ~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEGKR----------LPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCC----------CCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11100 0011122246888999999999999999999999999875
No 112
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.7e-42 Score=344.57 Aligned_cols=238 Identities=20% Similarity=0.197 Sum_probs=187.5
Q ss_pred hccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 256 ASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
...++||+|+||+||+|... +++.||||++.... ......+..|+..+.++ +||||++++++|.+.+..++||||+
T Consensus 60 ~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~ 139 (311)
T 3p1a_A 60 QRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC 139 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc
Confidence 34578999999999999975 78999999986432 22234556666665554 8999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
+|+|.+++..... .++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 140 -~~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 140 -GPSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHLHSQ----GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp -CCBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred -CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 6799999887543 499999999999999999999998 9999999999999999999999999998766433
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..| . .+... ...+.+
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----------~~~-~-~~~~~----~~~~~~ 273 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----------EGW-Q-QLRQG----YLPPEF 273 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----------HHH-H-HHTTT----CCCHHH
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----------cHH-H-HHhcc----CCCccc
Confidence 23458999999998876 7999999999999999999997665411 011 1 11111 111111
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 274 ~~-----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 TA-----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc-----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11 11246888999999999999999999975
No 113
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-42 Score=341.74 Aligned_cols=247 Identities=21% Similarity=0.297 Sum_probs=200.5
Q ss_pred ceecccCceeEEEEEEe---CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
+.||+|+||.||+|... ++..||+|.++... ....+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999853 57789999997542 33456799999999999999999999999 566799999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 95 PLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEEK----NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp EHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred CHHHHHHhCCc----cCCHHHHHHHHHHHHHHHHHHHHC----CEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 99999975432 489999999999999999999998 9999999999999999999999999999765432
Q ss_pred ----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
....+|+.|+|||++.+..++.++|||||||++|||+| |+.||... ...+...... .... +
T Consensus 167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~i~-~~~~-----~ 232 (287)
T 1u59_A 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--------KGPEVMAFIE-QGKR-----M 232 (287)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC--------CTHHHHHHHH-TTCC-----C
T ss_pred eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC--------CHHHHHHHHh-cCCc-----C
Confidence 12345788999999888889999999999999999999 99999632 1122222211 1111 0
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. +......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 233 ~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 233 EC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp CC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CC-----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11 1112246888999999999999999999999999997653
No 114
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6.6e-42 Score=349.81 Aligned_cols=255 Identities=21% Similarity=0.314 Sum_probs=201.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhc--CCCCCccceEEEEEecC----ceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGS--LSHPNLLPLIAFYYRKE----EKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~E~ 330 (565)
..+.||+|+||+||+|+. +++.||||.+... ....+.+|++++.. ++||||+++++++...+ ..++||||
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~ 121 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence 468899999999999987 6899999998642 35678889988887 79999999999998776 78999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY--------KEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH--------~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+|||++.++.+||+||
T Consensus 122 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~----~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 122 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP----AIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC----EEECSCCSGGGEEECTTSCEEECCC
T ss_pred cCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC----CeeeCCCCHHHEEECCCCCEEEEEC
Confidence 9999999999753 3899999999999999999999 55 8999999999999999999999999
Q ss_pred CCccccccc--------ccccccccccCCCccCCCC------CCcchhHHHHHHHHHHHHcC----------CCCccccc
Q 008431 403 ALVPIVNKE--------HAQLHMVAYKSPEFNQTDG------VTRKTDVWSLGILILELLTG----------KFPANYLA 458 (565)
Q Consensus 403 Gla~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~DvwS~Gvil~el~tg----------~~p~~~~~ 458 (565)
|+++..... ....+|+.|+|||++.+.. ++.++|||||||++|||+|| +.||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 998765432 2336789999999887652 34789999999999999999 67775322
Q ss_pred cCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 459 QGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. ......+........ ..+.+............+.+++.+||+.||++|||+.||++.|+++....
T Consensus 272 ~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 272 PS---DPSVEEMRKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CS---SCCHHHHHHHHTTSC-----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cC---cccHHHHHHHHHHHH-----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 21 112223322222211 11222111112356678899999999999999999999999999997653
No 115
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-41 Score=340.39 Aligned_cols=251 Identities=16% Similarity=0.219 Sum_probs=194.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCcc---CHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNV---GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 117 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLIN 117 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecC
Confidence 4578999999999999964 6889999998754222 24678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 118 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 118 GVDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAA----GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 999999998653 389999999999999999999998 9999999999999999999999999998765433
Q ss_pred ----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....+++.|+|||++.+..++.++|||||||++|||++|+.||... . ...+........... ..
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~-~~~~~~~~~~~~~~~---~~ 256 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD--------Q-LSVMGAHINQAIPRP---ST 256 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC--------H-HHHHHHHHHSCCCCG---GG
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc--------h-HHHHHHHhccCCCCc---cc
Confidence 2346789999999999889999999999999999999999999621 1 112222222211100 00
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHhhccC
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRW-DLREAVEKIMELKERD 533 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~i~~~~ 533 (565)
... .....+.+++.+||+.||++|| |++++++.|+++....
T Consensus 257 ~~~-----~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 257 VRP-----GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp TST-----TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cCC-----CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 100 1112678889999999999999 9999999999886554
No 116
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-41 Score=336.86 Aligned_cols=242 Identities=21% Similarity=0.251 Sum_probs=197.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|... ++..+|+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 4578999999999999964 567899999987656667889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccccc-
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~- 411 (565)
|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||++......
T Consensus 93 L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 93 LFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKL----NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp HHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 999997654 389999999999999999999998 99999999999999 88899999999998765433
Q ss_pred --ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....+|+.|+|||++.+. ++.++|||||||++|||++|+.||... ............... .......
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~--~~~~~~~ 232 (277)
T 3f3z_A 164 MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP--------TDSEVMLKIREGTFT--FPEKDWL 232 (277)
T ss_dssp CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHCCCC--CCHHHHT
T ss_pred chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHhCCCC--CCchhhh
Confidence 345688999999987654 899999999999999999999999631 122222222111100 0000000
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.....+.+++.+||+.||++|||+.|+++
T Consensus 233 ------~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 233 ------NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ------TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11246788999999999999999999976
No 117
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.4e-42 Score=346.51 Aligned_cols=253 Identities=19% Similarity=0.309 Sum_probs=203.6
Q ss_pred ccceecccCceeEEEEEEe------CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 108 (322)
T 1p4o_A 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108 (322)
T ss_dssp EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence 4678999999999999854 46789999987532 2334578999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCC
Q 008431 330 FVPNGSLANLLHVRRA-----PGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL 404 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGl 404 (565)
|+++|+|.+++..... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~NIli~~~~~~kl~Dfg~ 184 (322)
T 1p4o_A 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN----KFVHRDLAARNCMVAEDFTVKIGDFGM 184 (322)
T ss_dssp CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC----CCccCCCccceEEEcCCCeEEECcCcc
Confidence 9999999999976421 1112478999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhh
Q 008431 405 VPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVRE 477 (565)
Q Consensus 405 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 477 (565)
++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.. .............
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~--------~~~~~~~~~~~~~ 256 (322)
T 1p4o_A 185 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG--------LSNEQVLRFVMEG 256 (322)
T ss_dssp CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT--------SCHHHHHHHHHTT
T ss_pred ccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc--------CCHHHHHHHHHcC
Confidence 9765432 23345788999999888889999999999999999999 8999862 1222222222221
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 478 EWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 478 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
. ... . +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 257 ~-~~~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 257 G-LLD-----K-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp C-CCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred C-cCC-----C-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1 100 0 011223678899999999999999999999999988654
No 118
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.7e-42 Score=345.22 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=201.2
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEe----cCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR----KEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~E~~ 331 (565)
..+.||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++.. ....++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 457899999999999996 6789999999876555566789999999999999999999999973 34689999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 113 KRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHAK----GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp TTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred CCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 999999999864322 22499999999999999999999998 9999999999999999999999999998764321
Q ss_pred -------------ccccccccccCCCccCCCC---CCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHh
Q 008431 412 -------------HAQLHMVAYKSPEFNQTDG---VTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 412 -------------~~~~~t~~y~aPE~~~~~~---~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
....+|+.|+|||++.... ++.++|||||||++|||++|+.||....... ..+...+
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~---- 260 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG---DSVALAV---- 260 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT---SCHHHHH----
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc---chhhHHh----
Confidence 1224588999999887654 6899999999999999999999996432211 1111111
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
... ...+. .......+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 261 ~~~----~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 261 QNQ----LSIPQ------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp HCC------CCC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred hcc----CCCCc------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 110 00000 0111236888999999999999999999999999997654
No 119
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.1e-42 Score=351.49 Aligned_cols=261 Identities=20% Similarity=0.275 Sum_probs=202.1
Q ss_pred ccceecccCceeEEEEEE-----eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEe--cCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL-----LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR--KEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~E 329 (565)
..+.||+|+||.||+|.+ .++..||||++........+.+.+|++++++++||||+++++++.. ....++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 457899999999999984 3678899999986655556779999999999999999999999874 456899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 107 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSR----RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp CCTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred ecCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999986443 389999999999999999999998 99999999999999999999999999997654
Q ss_pred cc-------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCC------CCCcchHHHHHHHhh
Q 008431 410 KE-------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGK------GANADLATWVNSVVR 476 (565)
Q Consensus 410 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~------~~~~~~~~~~~~~~~ 476 (565)
.. ....+|..|+|||++.+..++.++|||||||++|||++|+.||....... .........+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 32 22346778999999988889999999999999999999999986321100 000000011111111
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCC
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDND 535 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 535 (565)
.... ...+......+.+++.+||+.||++|||+.|+++.|+.+......
T Consensus 259 ~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 307 (327)
T 3lxl_A 259 EGQR----------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG 307 (327)
T ss_dssp TTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred cccC----------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence 1100 001112234688899999999999999999999999999765533
No 120
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.2e-42 Score=347.68 Aligned_cols=251 Identities=19% Similarity=0.269 Sum_probs=193.0
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCcc---CHHHHHHHHHHHhcCCCCCccceEEEEEecCce----EEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNV---GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEK----LLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----~lv~ 328 (565)
..+.||+|+||.||+|+. .+++.||||++...... ....+.+|+.++++++||||+++++++...... |+||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~ 95 (311)
T 3ork_A 16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM 95 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEE
Confidence 357899999999999995 57889999999754322 235789999999999999999999999876544 9999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 96 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 96 EYVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQN----GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp ECCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 9999999999998654 389999999999999999999998 9999999999999999999999999999765
Q ss_pred ccc-------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccC
Q 008431 409 NKE-------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTG 481 (565)
Q Consensus 409 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (565)
... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.. ................
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~--------~~~~~~~~~~~~~~~~- 237 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG--------DSPVSVAYQHVREDPI- 237 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHCCCC-
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHhcCCCC-
Confidence 432 223578999999999998999999999999999999999999962 2222222222222111
Q ss_pred ccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHH-HHHHHHHhhcc
Q 008431 482 EVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLRE-AVEKIMELKER 532 (565)
Q Consensus 482 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~e-vl~~L~~i~~~ 532 (565)
.+..... .....+.+++.+||+.||++||++.+ +...+.++...
T Consensus 238 ---~~~~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 238 ---PPSARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ---CHHHHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ---CcccccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 0100000 11236788899999999999995554 55666666443
No 121
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.9e-42 Score=339.49 Aligned_cols=249 Identities=20% Similarity=0.352 Sum_probs=202.3
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+.||+|+||.||+|...++..||+|.+... ....+.+.+|++++++++||||+++++++. .+..++||||+++|+|
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L 94 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSL 94 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBH
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCH
Confidence 45789999999999999888889999998754 334678999999999999999999999875 5568999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE----- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~----- 411 (565)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 95 VDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEER----NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp HHHTTSHHH---HTCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred HHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 999865321 1389999999999999999999998 9999999999999999999999999999766433
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....++..|+|||++....++.++|||||||++|||++ |+.||... ...+...... .... ...
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~--------~~~~~~~~~~-~~~~-----~~~-- 231 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM--------TNPEVIQNLE-RGYR-----MVR-- 231 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHHHHHHH-TTCC-----CCC--
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc--------CHHHHHHHHh-cccC-----CCC--
Confidence 22345678999999888889999999999999999999 99998621 1222222221 1110 000
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
+......+.+++.+|++.||++|||+.++++.|+++....
T Consensus 232 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 232 ---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 0112246888999999999999999999999999987653
No 122
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=355.95 Aligned_cols=256 Identities=17% Similarity=0.175 Sum_probs=193.7
Q ss_pred ccceecccCceeEEEEEEe----CCCeeEEEEeeccCcc-----------CHHHHHHHHHHHhcCCCCCccceEEEEEe-
Q 008431 257 SAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMSNV-----------GKEDFHEHMTRLGSLSHPNLLPLIAFYYR- 320 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~- 320 (565)
..+.||+|+||+||+|... ++..+|+|++...... ....+.+|+..++.++||||+++++++..
T Consensus 41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~ 120 (345)
T 2v62_A 41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE 120 (345)
T ss_dssp EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence 4578999999999999975 6788999998754221 22347788899999999999999999988
Q ss_pred ---cCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC--
Q 008431 321 ---KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY-- 395 (565)
Q Consensus 321 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-- 395 (565)
....|+||||+ +|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 121 FKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHEN----EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp SSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEESSSTT
T ss_pred cCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeeCCCcCHHHEEEccCCCC
Confidence 67889999999 999999987654 389999999999999999999998 999999999999998887
Q ss_pred CcEEeccCCccccccc-----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCC
Q 008431 396 EPLLTDYALVPIVNKE-----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGAN 464 (565)
Q Consensus 396 ~~kl~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~ 464 (565)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||..... .
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~ 266 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----D 266 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----C
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----c
Confidence 9999999999765322 234678999999999988999999999999999999999999963111 0
Q ss_pred cchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 465 ADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
.............. ....+....... .....+.+++.+||+.||++|||+.+|++.|+++..
T Consensus 267 ~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 267 PVAVQTAKTNLLDE-LPQSVLKWAPSG----SSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHHHHT-TTHHHHHHSCTT----SCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cHHHHHHHHhhccc-ccHHHHhhcccc----ccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111111111111 111111111100 112368888899999999999999999999998754
No 123
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-41 Score=344.05 Aligned_cols=255 Identities=21% Similarity=0.301 Sum_probs=193.9
Q ss_pred hhccceecccCceeEEEEEEe----CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecC-----c
Q 008431 255 RASAEVLGSGSFGSSYKAVLL----TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE-----E 323 (565)
Q Consensus 255 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~ 323 (565)
+...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 345688999999999999854 33479999987432 233467999999999999999999999998754 3
Q ss_pred eEEEEeccCCCCHHHHHhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 324 KLLVSDFVPNGSLANLLHVRRA-PGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 324 ~~lv~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
.++||||+++|+|.+++..... .....+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~~~~~kl~Df 191 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR----NFLHRDLAARNCMLRDDMTVCVADF 191 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCSGGGEEECTTSCEEECSC
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCcceEEEcCCCcEEEeec
Confidence 5999999999999999964321 1223599999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHh
Q 008431 403 ALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 403 Gla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
|+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... .........
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~ 263 (313)
T 3brb_A 192 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ--------NHEMYDYLL 263 (313)
T ss_dssp SCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------GGGHHHHHH
T ss_pred CcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC--------HHHHHHHHH
Confidence 999765432 22345678999999988899999999999999999999 899986321 111222221
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
... .. .. +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 264 ~~~-~~-----~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 264 HGH-RL-----KQ-----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp TTC-CC-----CC-----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCC-CC-----CC-----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111 00 00 011224688899999999999999999999999998754
No 124
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.6e-42 Score=362.17 Aligned_cols=246 Identities=17% Similarity=0.169 Sum_probs=196.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..++||+|+||+||+|+.. +++.||+|++.... ......+.+|+.++..++|||||+++++|.+.+..|+|||||+
T Consensus 78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 4578999999999999965 57889999997421 2223458899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 158 gg~L~~~l~~~~~----~l~e~~~~~~~~qi~~aL~~LH~~----giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 158 GGDLLTLLSKFED----RLPEEMARFYLAEMVIAIDSVHQL----HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp TCBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCcHHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHHhC----CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999976432 399999999999999999999998 9999999999999999999999999999765432
Q ss_pred ----ccccccccccCCCccC-----CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 412 ----HAQLHMVAYKSPEFNQ-----TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
....||+.|+|||++. ...|+.++|||||||++|||++|+.||.. .+..+.............
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~--------~~~~~~~~~i~~~~~~~~ 301 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA--------ESLVETYGKIMNHKERFQ 301 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTHHHHCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC--------CChhHHHHhhhhcccccc
Confidence 2347899999999876 56789999999999999999999999962 222233333322110000
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAER--RWDLREAVEK 525 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~--RPs~~evl~~ 525 (565)
.|... ......+.+++.+||..+|++ ||+++|+++.
T Consensus 302 --~p~~~-----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 302 --FPTQV-----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --CCSSC-----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --CCccc-----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 01110 011236778888999988888 9999999764
No 125
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6e-42 Score=353.69 Aligned_cols=246 Identities=13% Similarity=0.123 Sum_probs=199.5
Q ss_pred ccceecccCceeEEEEE------EeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC---CCCccceEEEEEecCceEEE
Q 008431 257 SAEVLGSGSFGSSYKAV------LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS---HPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv 327 (565)
..+.||+|+||+||+|. ..+++.||+|++... ...++.+|+++++.++ |+||+++++++...+..|+|
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv 145 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence 45789999999999993 557899999998643 4567888888888887 99999999999999999999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC-----------CCC
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN-----------AYE 396 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-----------~~~ 396 (565)
|||+++|+|.+++..........++|..+..++.||+.||+|||+. +|+||||||+|||++. ++.
T Consensus 146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~----~ivHrDiKp~NIll~~~~~~~~~~~~~~~~ 221 (365)
T 3e7e_A 146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC----EIIHGDIKPDNFILGNGFLEQDDEDDLSAG 221 (365)
T ss_dssp ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECGGGTCC------CTT
T ss_pred EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC----CeecCCCCHHHEEecccccCccccccccCC
Confidence 9999999999999865433334599999999999999999999998 9999999999999998 899
Q ss_pred cEEeccCCcccccc------cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHH
Q 008431 397 PLLTDYALVPIVNK------EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATW 470 (565)
Q Consensus 397 ~kl~DfGla~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~ 470 (565)
+||+|||+++.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--------- 292 (365)
T 3e7e_A 222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--------- 292 (365)
T ss_dssp EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---------
T ss_pred EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---------
Confidence 99999999965431 134568999999999999999999999999999999999999986322100
Q ss_pred HHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCC-CCHHHHHHHHHHhhccC
Q 008431 471 VNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR-WDLREAVEKIMELKERD 533 (565)
Q Consensus 471 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R-Ps~~evl~~L~~i~~~~ 533 (565)
......+.... . ...+.+++..|++.+|.+| |++.++.+.|+++....
T Consensus 293 -----------~~~~~~~~~~~-~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 -----------CKPEGLFRRLP-H---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -----------EEECSCCTTCS-S---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -----------eeechhccccC-c---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 00111111111 1 2345667779999999999 58999999999887653
No 126
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8e-42 Score=355.86 Aligned_cols=193 Identities=24% Similarity=0.332 Sum_probs=169.0
Q ss_pred ccceeccc--CceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSG--SFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+| +||+||+|+.. +++.||||++.... ....+.+.+|+.+++.++|||||++++++.+.+..++||||+
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 45789999 99999999965 78999999997532 233467888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+......
T Consensus 109 ~~~~L~~~l~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~----~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 109 AYGSAKDLICTHFMD---GMNELAIAYILQGVLKALDYIHHM----GYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp TTCBHHHHHHHTCTT---CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred CCCCHHHHHhhhccc---CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999865322 489999999999999999999998 9999999999999999999999999987543211
Q ss_pred -----------ccccccccccCCCccCC--CCCCcchhHHHHHHHHHHHHcCCCCccc
Q 008431 412 -----------HAQLHMVAYKSPEFNQT--DGVTRKTDVWSLGILILELLTGKFPANY 456 (565)
Q Consensus 412 -----------~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gvil~el~tg~~p~~~ 456 (565)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 22367889999999877 5799999999999999999999999963
No 127
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.7e-42 Score=339.21 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=197.4
Q ss_pred ccceecccCceeEEEEEEeCC----CeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLLTG----PAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||+||+|..... ..||+|.+... .....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCCEEEEecC
Confidence 457899999999999986532 35999998754 2334578999999999999999999999875 45679999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 95 PYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESI----NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp TTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred CCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999976543 389999999999999999999998 9999999999999999999999999998765433
Q ss_pred -----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 412 -----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 412 -----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||..... ......+ .......
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~~~~~----~~~~~~~--- 234 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDVIGVL----EKGDRLP--- 234 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGHHHHH----HHTCCCC---
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHHHHHH----hcCCCCC---
Confidence 22345778999999988889999999999999999998 9999863211 1121111 1111000
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
. +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 235 --~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 235 --K-----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp --C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --C-----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0 011123678899999999999999999999999988653
No 128
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-41 Score=355.69 Aligned_cols=245 Identities=17% Similarity=0.219 Sum_probs=187.5
Q ss_pred cceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHH-hcCCCCCccceEEEEEe----cCceEEEEecc
Q 008431 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRL-GSLSHPNLLPLIAFYYR----KEEKLLVSDFV 331 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~lv~E~~ 331 (565)
.++||+|+||+||+|... +++.||||++.. ...+.+|+.++ +..+||||+++++++.. .+..|+||||+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence 368999999999999964 688999999863 24677888887 45689999999999875 56789999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCCcccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYALVPIV 408 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGla~~~ 408 (565)
++|+|.+++..... ..+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 142 ~gg~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 142 DGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSI----NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp CSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred CCCcHHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 99999999976432 2499999999999999999999998 9999999999999997 789999999999865
Q ss_pred ccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 409 NKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 409 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
... ....+|+.|+|||++.+..|+.++|||||||++|||++|+.||........ ...... .+..+.. ....
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~----~i~~~~~-~~~~ 288 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKT----RIRMGQY-EFPN 288 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-CCSHHH----HHHHTCC-CCCT
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-cHHHHH----HHHcCcc-cCCC
Confidence 433 345679999999999999999999999999999999999999964221110 011111 1111110 0001
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKI 526 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L 526 (565)
+.. ......+.+++.+||+.||++|||+.|+++.-
T Consensus 289 ~~~------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 289 PEW------SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp TTT------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ccc------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 111 11224678899999999999999999998753
No 129
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.3e-42 Score=363.43 Aligned_cols=240 Identities=19% Similarity=0.316 Sum_probs=198.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..|+||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 4578999999999999965 79999999997432 2335679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 100 GGELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp SEEHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999996533 389999999999999999999998 9999999999999999999999999999876443
Q ss_pred --ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.. ................ .+
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~--------~~~~~~~~~i~~~~~~----~p-- 236 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD--------DHVPTLFKKICDGIFY----TP-- 236 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC--------SSSHHHHHHHHTTCCC----CC--
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC--------CCHHHHHHHHhcCCcC----CC--
Confidence 34578999999999888765 6899999999999999999999972 2222333222222100 00
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
......+.+++.+||+.||++|||+.|+++.
T Consensus 237 ------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 ------QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1112367888999999999999999999873
No 130
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.4e-41 Score=343.58 Aligned_cols=251 Identities=21% Similarity=0.281 Sum_probs=192.9
Q ss_pred cceecccCceeEEEEE-EeCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 258 AEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
.++||+|+||+||+|. ..+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 3679999999999999 457899999999866556678899999999885 79999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC---cEEeccCCccccccc-
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE---PLLTDYALVPIVNKE- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DfGla~~~~~~- 411 (565)
|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.....
T Consensus 98 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 98 ILSHIHKRR-----HFNELEASVVVQDVASALDFLHNK----GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred HHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC----CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 999998654 389999999999999999999998 9999999999999988776 999999998764321
Q ss_pred ----------ccccccccccCCCccCC-----CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCC---cch---HHH
Q 008431 412 ----------HAQLHMVAYKSPEFNQT-----DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGAN---ADL---ATW 470 (565)
Q Consensus 412 ----------~~~~~t~~y~aPE~~~~-----~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~---~~~---~~~ 470 (565)
....+|+.|+|||++.. ..++.++|||||||++|||++|+.||.......... ... ...
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 12348899999998764 458899999999999999999999997432211000 000 011
Q ss_pred HHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 471 VNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 471 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
+...+..... ....+... .....+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~i~~~~~-~~~~~~~~------~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 249 LFESIQEGKY-EFPDKDWA------HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHCCC-CCCHHHHT------TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhccCc-ccCchhcc------cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1111111110 00000000 11236788999999999999999999976
No 131
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.8e-41 Score=342.39 Aligned_cols=243 Identities=21% Similarity=0.320 Sum_probs=198.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc------cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN------VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||.||+|... +|..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 4678999999999999965 688999999975322 136789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC----CcEEeccCCc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY----EPLLTDYALV 405 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DfGla 405 (565)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 96 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~----~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTK----KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp CCCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 999999999997543 389999999999999999999998 999999999999999887 7999999999
Q ss_pred cccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
+..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.. ...............
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~i~~~~~--- 235 (321)
T 2a2a_A 167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG--------DTKQETLANITSVSY--- 235 (321)
T ss_dssp EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC--------SSHHHHHHHHHTTCC---
T ss_pred eecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhccc---
Confidence 766543 344688999999999989999999999999999999999999962 122222222221110
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
..++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~-----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSH-----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTT-----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcc-----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011111111 1136788999999999999999999976
No 132
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.3e-41 Score=336.64 Aligned_cols=241 Identities=20% Similarity=0.344 Sum_probs=192.6
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEe----cCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR----KEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~E 329 (565)
..+.||+|+||+||+|.. .++..||+|.+... .....+.+.+|+.++++++||||+++++++.. ....++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 346799999999999995 46788999998743 23345679999999999999999999999875 345899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--CccCCCCCCCEEEc-CCCCcEEeccCCcc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT--LPHGHLKSSNVLLD-NAYEPLLTDYALVP 406 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~-~~~~~kl~DfGla~ 406 (565)
|+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+|||++ .++.+||+|||++.
T Consensus 110 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTR----TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTS----SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred ecCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcC----CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999998654 389999999999999999999998 6 99999999999997 78999999999997
Q ss_pred ccccc--ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccc
Q 008431 407 IVNKE--HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVF 484 (565)
Q Consensus 407 ~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (565)
..... ....+|+.|+|||++.+ .++.++|||||||++|||++|+.||... ............. ......
T Consensus 181 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~-------~~~~~~~~~~~~~-~~~~~~ 251 (290)
T 1t4h_A 181 LKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC-------QNAAQIYRRVTSG-VKPASF 251 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC-------SSHHHHHHHHTTT-CCCGGG
T ss_pred cccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCc-------CcHHHHHHHHhcc-CCcccc
Confidence 65433 34468899999998764 5899999999999999999999999631 1222222222211 111111
Q ss_pred cccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 485 DKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 485 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
+ .. ....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~----~~-----~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 D----KV-----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----GC-----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C----CC-----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1 11 1136888999999999999999999975
No 133
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.7e-42 Score=376.86 Aligned_cols=245 Identities=20% Similarity=0.313 Sum_probs=197.3
Q ss_pred ceecccCceeEEEEEEe---CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
+.||+|+||+||+|.+. +++.||||+++... ....++|.+|+++|++++|||||+++++|. .+..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 57999999999999753 45789999997532 234578999999999999999999999985 4568999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc-
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH- 412 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~- 412 (565)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~----~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~ 524 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 524 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHC----CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc
Confidence 99999997543 389999999999999999999998 99999999999999999999999999998654321
Q ss_pred ------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 413 ------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 413 ------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
...+|+.|+|||++....++.++|||||||++|||+| |+.||... ...+ +...+..+....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~--------~~~~-~~~~i~~~~~~~--- 592 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--------KGSE-VTAMLEKGERMG--- 592 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHH-HHHHHHTTCCCC---
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------CHHH-HHHHHHcCCCCC---
Confidence 2235678999999988899999999999999999999 99999631 1112 222222221110
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
. +......+.+++.+||+.||++|||+.+|++.|+++...
T Consensus 593 --~-----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 593 --C-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp --C-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --C-----CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 0 112224688899999999999999999999999987543
No 134
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.7e-41 Score=342.13 Aligned_cols=256 Identities=19% Similarity=0.285 Sum_probs=196.4
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|.. .+|..||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 457899999999999995 578999999997532 2335678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 116 AGDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHSR----RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp SCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred CCCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhhC----CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 99999999753221 12489999999999999999999998 9999999999999999999999999998765433
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+++.|+|||++....++.++|||||||++|||++|+.||... ............... .. ..
T Consensus 191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~-~~-----~~ 258 (310)
T 2wqm_A 191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD------KMNLYSLCKKIEQCD-YP-----PL 258 (310)
T ss_dssp --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHHTTC-SC-----CC
T ss_pred ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc------chhHHHHHHHhhccc-CC-----CC
Confidence 2345788999999999889999999999999999999999998621 122222222222111 11 11
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. ......+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 259 ~~----~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 259 PS----DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp CT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cc----cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 00 111236788899999999999999999999999998764
No 135
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-41 Score=337.69 Aligned_cols=239 Identities=18% Similarity=0.283 Sum_probs=175.9
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~- 95 (275)
T 2eue_A 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA- 95 (275)
T ss_dssp CCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-
T ss_pred EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-
Confidence 347899999999999984 578999999987432 233567899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 96 GNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CEEHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 678888887543 389999999999999999999998 9999999999999999999999999999765443
Q ss_pred --ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+|+.|+|||.+.+..+ +.++|||||||++|||++|+.||.. ............... .+
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~~~~~~~-------~~ 231 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD--------ESIPVLFKNISNGVY-------TL 231 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCC-------CC
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCC-------CC
Confidence 34468899999999887765 7899999999999999999999962 222222222222110 00
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~-----~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 232 P-----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred C-----ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 1112367889999999999999999999753
No 136
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.8e-42 Score=350.01 Aligned_cols=269 Identities=24% Similarity=0.346 Sum_probs=195.6
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHH--HhcCCCCCccceEEEEEec-----CceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTR--LGSLSHPNLLPLIAFYYRK-----EEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~~-----~~~~lv~E 329 (565)
..+.||+|+||+||+|+. +++.||||++... ....+..|.++ +..++||||+++++++... ...++|||
T Consensus 17 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e 92 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME 92 (336)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred eeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEe
Confidence 357899999999999976 7899999998643 23444444444 5568999999999876532 25689999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-----CCCCccCCCCCCCEEEcCCCCcEEeccCC
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP-----GVTLPHGHLKSSNVLLDNAYEPLLTDYAL 404 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~-----~~~ivHrDlkp~NILl~~~~~~kl~DfGl 404 (565)
|+++|+|.+++.... .++..+..++.|++.||+|||+.+. ..+|+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 93 YYPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp CCTTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred cCCCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 999999999997543 6899999999999999999997621 11799999999999999999999999999
Q ss_pred ccccccc------------ccccccccccCCCccCC-------CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCc
Q 008431 405 VPIVNKE------------HAQLHMVAYKSPEFNQT-------DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANA 465 (565)
Q Consensus 405 a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~ 465 (565)
++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||..||...........
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 9765421 13358899999998876 3567799999999999999999877643221111100
Q ss_pred ch---------HHHHHHHhhhcccCccccccccCC-CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCC
Q 008431 466 DL---------ATWVNSVVREEWTGEVFDKDMRGT-KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDND 535 (565)
Q Consensus 466 ~~---------~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 535 (565)
.. ............. .+.+... .........+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred hhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 00 0111111111111 1111111 11234556799999999999999999999999999999877655
Q ss_pred CCCc
Q 008431 536 NEDY 539 (565)
Q Consensus 536 ~~~~ 539 (565)
++..
T Consensus 323 ~~~~ 326 (336)
T 3g2f_A 323 NKSV 326 (336)
T ss_dssp ----
T ss_pred cccC
Confidence 4443
No 137
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.2e-42 Score=353.70 Aligned_cols=238 Identities=21% Similarity=0.250 Sum_probs=186.5
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHH-HhcCCCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTR-LGSLSHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||.||+|+.. ++..||+|++.... ......+.+|..+ ++.++|||||++++++.+.+..|+||||+
T Consensus 42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~ 121 (373)
T 2r5t_A 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI 121 (373)
T ss_dssp EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence 4578999999999999965 67889999997542 2233456777776 57789999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc-
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK- 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~- 410 (565)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 122 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 122 NGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSL----NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999998654 388999999999999999999998 999999999999999999999999999976432
Q ss_pred ---cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 ---EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. .+............. .+.+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~--------~~~~~~~~~i~~~~~---~~~~- 260 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS--------RNTAEMYDNILNKPL---QLKP- 260 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC--------SBHHHHHHHHHHSCC---CCCS-
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC--------CCHHHHHHHHHhccc---CCCC-
Confidence 2345789999999999999999999999999999999999999962 222333333332210 0111
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAV 523 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl 523 (565)
.....+.+++.+||+.||++||++.+.+
T Consensus 261 --------~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 261 --------NITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp --------SSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred --------CCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 1123677888999999999999985433
No 138
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-41 Score=344.73 Aligned_cols=257 Identities=21% Similarity=0.324 Sum_probs=201.6
Q ss_pred ccceecccCceeEEEEEEe-CCCe--eEEEEeecc-CccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPA--MVVKRFRQM-SNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..+.||+|+||.||+|... ++.. +|+|.+... .....+.+.+|+.+++++ +||||+++++++.+.+..++||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 4578999999999999954 5554 489988743 233456799999999999 8999999999999999999999999
Q ss_pred CCCCHHHHHhhcCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEe
Q 008431 332 PNGSLANLLHVRRA-----------PGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLT 400 (565)
Q Consensus 332 ~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~ 400 (565)
++|+|.+++..... .....+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK----QFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECGGGCEEEC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCccceEEEcCCCeEEEc
Confidence 99999999976430 1123489999999999999999999998 99999999999999999999999
Q ss_pred ccCCccccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhh
Q 008431 401 DYALVPIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 401 DfGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
|||+++..... ....+++.|+|||++....++.++|||||||++|||+| |+.||.. .......... .
T Consensus 185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~--------~~~~~~~~~~-~ 255 (327)
T 1fvr_A 185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG--------MTCAELYEKL-P 255 (327)
T ss_dssp CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHG-G
T ss_pred ccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC--------CcHHHHHHHh-h
Confidence 99998754322 23345778999999888889999999999999999998 9999962 2222222222 1
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCCC
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDNDN 536 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~~ 536 (565)
.... ... +......+.+++.+||+.||++|||+.|+++.|+++.......
T Consensus 256 ~~~~-----~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~ 305 (327)
T 1fvr_A 256 QGYR-----LEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 305 (327)
T ss_dssp GTCC-----CCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCS
T ss_pred cCCC-----CCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCc
Confidence 1110 000 1112246888999999999999999999999999998765433
No 139
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.6e-41 Score=336.97 Aligned_cols=240 Identities=23% Similarity=0.298 Sum_probs=195.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|... ++..||+|.+.... ......+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 92 (279)
T 3fdn_A 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92 (279)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCC
Confidence 4578999999999999854 56789999986421 2335678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 93 ~~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~----~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 93 LGTVYRELQKLS-----KFDEQRTATYITELANALSYCHSK----RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT----TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 999999998654 389999999999999999999998 9999999999999999999999999998655433
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+++.|+|||++.+..++.++|||||||++|||++|+.||.. ............... ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~~~~~~~-------~~~- 227 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA--------NTYQETYKRISRVEF-------TFP- 227 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCC-------CCC-
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC--------CcHHHHHHHHHhCCC-------CCC-
Confidence 345678999999999999999999999999999999999999962 222222222211110 010
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
......+.+++.+||+.||++|||+.|+++.
T Consensus 228 ----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 228 ----DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1112367788999999999999999999875
No 140
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-42 Score=351.19 Aligned_cols=257 Identities=21% Similarity=0.277 Sum_probs=201.6
Q ss_pred ccceecccCceeEEEEEEe-----CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEec--CceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-----TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--EEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 328 (565)
..+.||+|+||+||++.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 4578999999999988643 67889999997543 23356799999999999999999999999874 5679999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+++|+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 115 e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~----~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQ----HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp CCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred ecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999653 289999999999999999999998 9999999999999999999999999999876
Q ss_pred ccc-------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCC----CCCcch--HHHHHHHh
Q 008431 409 NKE-------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGK----GANADL--ATWVNSVV 475 (565)
Q Consensus 409 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~----~~~~~~--~~~~~~~~ 475 (565)
... ....++..|+|||++.+..++.++|||||||++|||+||+.||....... ...... ...+....
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL 264 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence 432 22346778999999988889999999999999999999999986321100 000000 00011111
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
... .. ...+......+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 265 ~~~---------~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 265 ERG---------ER-LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp HTT---------CC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hcc---------cC-CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 111 00 0011122347888999999999999999999999999997764
No 141
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.9e-41 Score=332.07 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=201.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc------cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN------VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 4578999999999999965 689999999875321 236789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC----CcEEeccCCc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY----EPLLTDYALV 405 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~----~~kl~DfGla 405 (565)
|+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 89 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 89 LVSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHSK----RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred ecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 999999999997643 389999999999999999999998 999999999999998877 8999999999
Q ss_pred cccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
...... ....+++.|+|||++....++.++|||||||++|||++|+.||... ..............
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~~--- 228 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE--------TKQETLTNISAVNY--- 228 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS--------SHHHHHHHHHTTCC---
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc--------chHHHHHHhHhccc---
Confidence 765433 2345789999999999889999999999999999999999998621 11222222111110
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH--HHHHhhccC
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE--KIMELKERD 533 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~~~ 533 (565)
..++.... .....+.+++.+||+.||++|||+.|+++ .++.+....
T Consensus 229 ~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 229 DFDEEYFS-----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp CCCHHHHT-----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred CCcchhcc-----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 00111100 11236788999999999999999999997 466665544
No 142
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.3e-41 Score=338.24 Aligned_cols=244 Identities=20% Similarity=0.279 Sum_probs=196.7
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||.||+|... +|+.||+|.+........+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 4578999999999999964 789999999986544455679999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccccc-
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~- 411 (565)
|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 93 LFDRILERG-----VYTEKDASLVIQQVLSAVKYLHEN----GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp HHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 999997654 389999999999999999999998 99999999999999 78899999999998765433
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||... ............. . .. ....
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~-~-~~-~~~~-- 230 (304)
T 2jam_A 164 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--------TESKLFEKIKEGY-Y-EF-ESPF-- 230 (304)
T ss_dssp THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHCC-C-CC-CTTT--
T ss_pred cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHcCC-C-CC-Cccc--
Confidence 2345789999999999999999999999999999999999998621 1222222222111 1 00 0000
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 231 ---WDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ---TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ---cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01122467889999999999999999999874
No 143
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.7e-41 Score=335.70 Aligned_cols=242 Identities=22% Similarity=0.333 Sum_probs=198.6
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEe---------------
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR--------------- 320 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------------- 320 (565)
..+.||+|+||.||+|... +++.||+|.+.... +.+.+|++++++++||||+++++++..
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 90 (284)
T 2a19_B 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90 (284)
T ss_dssp EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence 4578999999999999975 78999999997532 457889999999999999999998864
Q ss_pred -cCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEE
Q 008431 321 -KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLL 399 (565)
Q Consensus 321 -~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 399 (565)
....++||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 91 KTKCLFIQMEFCDKGTLEQWIEKRRG---EKLDKVLALELFEQITKGVDYIHSK----KLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp EEEEEEEEECCCCSCBHHHHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEE
T ss_pred CcceEEEEEeccCCCCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeeeccCCHHHEEEcCCCCEEE
Confidence 3457999999999999999976532 2489999999999999999999998 9999999999999999999999
Q ss_pred eccCCccccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh
Q 008431 400 TDYALVPIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 400 ~DfGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++|..|+... ..+.... .
T Consensus 164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~~~-~ 232 (284)
T 2a19_B 164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFTDL-R 232 (284)
T ss_dssp CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHHHH-H
T ss_pred CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHHHh-h
Confidence 999998766443 3446789999999998888999999999999999999999987521 1111111 1
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.... . .. ....+.+++.+||+.||++|||+.|+++.|..++...
T Consensus 233 ~~~~----~----~~-----~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 233 DGII----S----DI-----FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp TTCC----C----TT-----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred cccc----c----cc-----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 1111 1 11 1135778889999999999999999999999997654
No 144
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.7e-42 Score=340.03 Aligned_cols=248 Identities=23% Similarity=0.373 Sum_probs=194.7
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEec-CceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK-EEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~E~~~~gs 335 (565)
..+.||+|+||+||+|.. +|+.||||.++.. ...+.+.+|+.++++++||||+++++++... +..++||||+++|+
T Consensus 25 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred EEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 457899999999999986 5889999998753 3467899999999999999999999997654 47899999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-ccc
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-HAQ 414 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-~~~ 414 (565)
|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ...
T Consensus 102 L~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 102 LVDYLRSRGR---SVLGGDCLLKFSLDVCEAMEYLEGN----NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp HHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred HHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHhC----CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 9999976432 1278899999999999999999998 9999999999999999999999999998765433 234
Q ss_pred cccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCC
Q 008431 415 LHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKS 493 (565)
Q Consensus 415 ~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 493 (565)
.+++.|+|||.+.+..++.++|||||||++|||+| |+.||.... ........ ..... +...
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~~~~~~~-~~~~~-----~~~~---- 236 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRV-EKGYK-----MDAP---- 236 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--------GGGHHHHH-TTTCC-----CCCC----
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-hcCCC-----CCCc----
Confidence 56788999999988889999999999999999998 999986321 11112111 11110 1111
Q ss_pred CHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 494 GEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 494 ~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
......+.+++.+||+.||++|||+.|+++.|++++...
T Consensus 237 -~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 237 -DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 112246788899999999999999999999999997654
No 145
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.9e-41 Score=346.83 Aligned_cols=190 Identities=21% Similarity=0.280 Sum_probs=168.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-----CCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-----HPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|+. .+++.||||+++.. ....+.+..|+.+++++. |||||++++++...+..++||||
T Consensus 39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 117 (360)
T 3llt_A 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEP 117 (360)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECC
T ss_pred EEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcC
Confidence 457899999999999996 57889999998642 233456788999999986 99999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC-----------------
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN----------------- 393 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~----------------- 393 (565)
+ +++|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 118 ~-~~~L~~~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~ 189 (360)
T 3llt_A 118 L-GPSLYEIITRNNYN---GFHIEDIKLYCIEILKALNYLRKM----SLTHTDLKPENILLDDPYFEKSLITVRRVTDGK 189 (360)
T ss_dssp C-CCBHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred C-CCCHHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCcccEEEccccccccccchhcccccc
Confidence 9 89999999865432 489999999999999999999998 9999999999999975
Q ss_pred --------CCCcEEeccCCccccccc-ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 394 --------AYEPLLTDYALVPIVNKE-HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 394 --------~~~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 190 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 190 KIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp EEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 789999999999865443 45578999999999999999999999999999999999999996
No 146
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=356.18 Aligned_cols=245 Identities=18% Similarity=0.169 Sum_probs=195.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..++||+|+||+||+|+.. +|+.||+|++.+.. ....+.+.+|..++..++||||+++++++.+.+..|+||||++
T Consensus 65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 4578999999999999964 78999999997421 2233458899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++..... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 145 gg~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~----giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 145 GGDLLTLLSKFGE----RIPAEMARFYLAEIVMAIDSVHRL----GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp SCBHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 9999999986542 389999999999999999999998 9999999999999999999999999999776433
Q ss_pred ----ccccccccccCCCccC-------CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc
Q 008431 412 ----HAQLHMVAYKSPEFNQ-------TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480 (565)
Q Consensus 412 ----~~~~~t~~y~aPE~~~-------~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (565)
....||+.|+|||++. ...|+.++|||||||++|||++|+.||.. .+..............
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~--------~~~~~~~~~i~~~~~~ 288 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA--------DSTAETYGKIVHYKEH 288 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTHHHH
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC--------CCHHHHHHHHHhcccC
Confidence 2347899999999876 45789999999999999999999999962 2222222222221100
Q ss_pred CccccccccCCCCCHHHHHHHHHHHhhccccCcCCC---CCHHHHHHH
Q 008431 481 GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERR---WDLREAVEK 525 (565)
Q Consensus 481 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~R---Ps~~evl~~ 525 (565)
...|... ......+.+++.+||. +|++| |+++|+++.
T Consensus 289 --~~~p~~~-----~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 289 --LSLPLVD-----EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --CCCC---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --cCCCccc-----cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0001110 1112367888899999 99998 589998653
No 147
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.4e-42 Score=348.27 Aligned_cols=250 Identities=21% Similarity=0.289 Sum_probs=186.0
Q ss_pred hhccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CCCccceEEEEEe--------cCce
Q 008431 255 RASAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYR--------KEEK 324 (565)
Q Consensus 255 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--------~~~~ 324 (565)
+...++||+|+||.||+|+. .+++.||+|++........+.+.+|+.+++++. ||||+++++++.. ....
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 34568999999999999995 478999999987655555678999999999996 9999999999953 2347
Q ss_pred EEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC--CccCCCCCCCEEEcCCCCcEEecc
Q 008431 325 LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT--LPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 325 ~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~--ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
++||||+. |+|.+++...... ..+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+||
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~----~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESR--GPLSCDTVLKIFYQTCRAVQHMHRQ----KPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTT--CSCCHHHHHHHHHHHHHHHHHHHTS----SSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred EEEEEecC-CCHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC----CCCEEEccCCcccEEECCCCCEEEecC
Confidence 99999996 7999998753321 2499999999999999999999998 7 999999999999999999999999
Q ss_pred CCcccccccc----------------cccccccccCCCcc---CCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCC
Q 008431 403 ALVPIVNKEH----------------AQLHMVAYKSPEFN---QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463 (565)
Q Consensus 403 Gla~~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~ 463 (565)
|+++...... ...+|+.|+|||++ ....++.++|||||||++|||+||+.||.....
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---- 258 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK---- 258 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH----
Confidence 9997754321 23478899999987 566789999999999999999999999963211
Q ss_pred CcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 464 NADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..... .. ....... .....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 259 ----~~~~~----~~-----~~~~~~~-----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 259 ----LRIVN----GK-----YSIPPHD-----TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------------------CCCCTTC-----CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----HHhhc----Cc-----ccCCccc-----ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 01110 00 0000000 11124678889999999999999999999999997653
No 148
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-42 Score=346.30 Aligned_cols=269 Identities=16% Similarity=0.226 Sum_probs=195.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc-cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN-VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++...+..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 3478999999999999965 788999999864322 222345679999999999999999999999999999999997 5
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 85 DLKQYLDDCGN----IINMHNVKLFLFQLLRGLAYCHRQ----KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp EHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC----CccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 99999876543 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred -ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc---Cccccc
Q 008431 412 -HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT---GEVFDK 486 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~ 486 (565)
....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+......... ......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHhchhhhcc
Confidence 23467899999998766 5689999999999999999999999963211 1111222221111100 000000
Q ss_pred ------cccCCC-C-----CHHHHHHHHHHHhhccccCcCCCCCHHHHHH--HHHHhhccCCCCCCc
Q 008431 487 ------DMRGTK-S-----GEGEMLKLLKIGMCCCEWNAERRWDLREAVE--KIMELKERDNDNEDY 539 (565)
Q Consensus 487 ------~~~~~~-~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~~~~~~~~~ 539 (565)
...... . .......+.+++.+||+.||++|||+.|+++ .+..+........+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~ 298 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDT 298 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSSSCTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccccCCCC
Confidence 000000 0 0011246788999999999999999999987 455555443333333
No 149
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=355.49 Aligned_cols=267 Identities=20% Similarity=0.313 Sum_probs=209.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecC--ceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE--EKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~E~~~ 332 (565)
..++||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 4578999999999999965 58999999997533 344677899999999999999999999998765 6799999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE----cCCCCcEEeccCCcccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL----DNAYEPLLTDYALVPIV 408 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~kl~DfGla~~~ 408 (565)
+|+|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 93 ~g~L~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 93 CGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGMNHLREN----GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp TEEHHHHTTSGGGT--TCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred CCCHHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC----CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999764322 2389999999999999999999998 99999999999999 78888999999999876
Q ss_pred ccc---ccccccccccCCCccCC--------CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh
Q 008431 409 NKE---HAQLHMVAYKSPEFNQT--------DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE 477 (565)
Q Consensus 409 ~~~---~~~~~t~~y~aPE~~~~--------~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 477 (565)
... ....+|+.|+|||++.. ..++.++|||||||++|||+||+.||...... ......+......
T Consensus 167 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~----~~~~~~~~~~~~~ 242 (396)
T 4eut_A 167 EDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP----RRNKEVMYKIITG 242 (396)
T ss_dssp CCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT----TTCHHHHHHHHHS
T ss_pred cCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc----cchHHHHHHHhcC
Confidence 543 24468899999998754 46788999999999999999999999743221 1223333333322
Q ss_pred cccCc---c---------ccccccC-CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 478 EWTGE---V---------FDKDMRG-TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 478 ~~~~~---~---------~d~~~~~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..... . ..+.+.. ..........+.+++.+||++||++|||+.|+++.+.++....
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11100 0 0011111 1123456667889999999999999999999999999987653
No 150
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.7e-41 Score=334.98 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=197.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 89 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 89 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence 3578999999999999964 68899999987532 23346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC---cEEeccCCcccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE---PLLTDYALVPIVNK 410 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DfGla~~~~~ 410 (565)
|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 90 ~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 90 GELFEDIVARE-----FYSEADASHCIQQILESIAYCHSN----GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 99999987654 389999999999999999999998 9999999999999986655 99999999976654
Q ss_pred c---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 E---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
. ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.. ............... ....+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~--------~~~~~~~~~~~~~~~--~~~~~~ 230 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--------EDQHRLYAQIKAGAY--DYPSPE 230 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCC--CCCTTT
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC--------CchhHHHHHHHhccc--cCCchh
Confidence 3 235688999999999999999999999999999999999999962 122222222221111 111111
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 231 W------DTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp T------TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred h------cccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1 1112367888999999999999999999874
No 151
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=348.04 Aligned_cols=242 Identities=17% Similarity=0.285 Sum_probs=190.3
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCC--CCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSH--PNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++| |||+++++++...+..++|||| .
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-G 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-C
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-C
Confidence 457899999999999998889999999987432 2334678999999999987 9999999999999999999994 5
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 92 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~----~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 92 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp SEEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 789999998643 389999999999999999999998 999999999999997 578999999999876433
Q ss_pred -----ccccccccccCCCccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHh
Q 008431 412 -----HAQLHMVAYKSPEFNQT-----------DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 412 -----~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ...........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-------~~~~~~~~~~~ 234 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAII 234 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHH
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh-------hhHHHHHHHHh
Confidence 23468999999998753 67899999999999999999999999631 11112222222
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKI 526 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L 526 (565)
...... ... ......+.+++.+||+.||++|||+.|+++.-
T Consensus 235 ~~~~~~-----~~~-----~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 235 DPNHEI-----EFP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CTTSCC-----CCC-----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCCccc-----CCc-----ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111100 010 11123677889999999999999999998753
No 152
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.2e-41 Score=335.59 Aligned_cols=241 Identities=18% Similarity=0.243 Sum_probs=195.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|... +++.||+|.+.... .....++.+|+..+..+ +||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 94 (289)
T 1x8b_A 15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN 94 (289)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecC
Confidence 4578999999999999965 78999999987532 33456788999999999 99999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC-------------------
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN------------------- 393 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~------------------- 393 (565)
+|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 95 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 95 GGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSM----SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp TCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEC--------------------
T ss_pred CCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhC----CEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 99999999864321 12489999999999999999999998 9999999999999984
Q ss_pred CCCcEEeccCCcccccccccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHH
Q 008431 394 AYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVN 472 (565)
Q Consensus 394 ~~~~kl~DfGla~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 472 (565)
...+||+|||++..........+|+.|+|||++... .++.++|||||||++|||++|.+|+.. ... + .
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--------~~~--~-~ 238 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN--------GDQ--W-H 238 (289)
T ss_dssp CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS--------SHH--H-H
T ss_pred ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc--------hhH--H-H
Confidence 447999999999887776677799999999988765 567899999999999999999987641 111 1 1
Q ss_pred HHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 473 SVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 473 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. ..... +.+.. .....+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~-~~~~~-----~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 239 EI-RQGRL-----PRIPQ-----VLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HH-HTTCC-----CCCSS-----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-HcCCC-----CCCCc-----ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11 11111 11111 11236788899999999999999999875
No 153
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.3e-42 Score=348.80 Aligned_cols=254 Identities=21% Similarity=0.300 Sum_probs=202.1
Q ss_pred ccceecccCceeEEEEEEeC-C-----CeeEEEEeeccC-ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLLT-G-----PAMVVKRFRQMS-NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 328 (565)
..+.||+|+||+||+|.... + ..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 45789999999999999642 2 379999987543 23456799999999999 8999999999999999999999
Q ss_pred eccCCCCHHHHHhhcCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEE
Q 008431 329 DFVPNGSLANLLHVRRAP---------GQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLL 399 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl 399 (565)
||+++|+|.+++...... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK----NCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGCEEEGGGEEEB
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC----CcccCCcccceEEECCCCeEEE
Confidence 999999999999754210 012489999999999999999999998 9999999999999999999999
Q ss_pred eccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHH
Q 008431 400 TDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVN 472 (565)
Q Consensus 400 ~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 472 (565)
+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||.... ....+.
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--------~~~~~~ 277 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--------VNSKFY 277 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC--------SSHHHH
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc--------hhHHHH
Confidence 999999765432 12345678999999888889999999999999999999 999986321 112222
Q ss_pred HHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 473 SVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 473 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
......... .. +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 278 ~~~~~~~~~-----~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 278 KLVKDGYQM-----AQ-----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHTCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCC-----CC-----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 222222110 00 011123678899999999999999999999999988653
No 154
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.2e-42 Score=344.65 Aligned_cols=256 Identities=20% Similarity=0.269 Sum_probs=202.6
Q ss_pred hccceecccCceeEEEEEEe------CCCeeEEEEeeccCc-cCHHHHHHHHHHHhcC-CCCCccceEEEEEecC-ceEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLL------TGPAMVVKRFRQMSN-VGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKE-EKLL 326 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~~l 326 (565)
...+.||+|+||+||+|... +++.||||.++.... ...+.+.+|+.+++++ +||||+++++++...+ ..++
T Consensus 30 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~l 109 (316)
T 2xir_A 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109 (316)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEE
T ss_pred eeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEE
Confidence 35678999999999999842 457899999975432 3346789999999999 7999999999997755 4899
Q ss_pred EEeccCCCCHHHHHhhcCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC
Q 008431 327 VSDFVPNGSLANLLHVRRAPG-----------QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY 395 (565)
Q Consensus 327 v~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~ 395 (565)
||||+++|+|.+++....... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~----~i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR----KCIHRDLAARNILLSEKN 185 (316)
T ss_dssp EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEECGGG
T ss_pred EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC----CcccccCccceEEECCCC
Confidence 999999999999998654210 11278999999999999999999998 999999999999999999
Q ss_pred CcEEeccCCccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchH
Q 008431 396 EPLLTDYALVPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLA 468 (565)
Q Consensus 396 ~~kl~DfGla~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~ 468 (565)
.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.... ..
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--------~~ 257 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK--------ID 257 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------CS
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc--------hh
Confidence 9999999999765432 23346788999999988889999999999999999998 999986321 11
Q ss_pred HHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 469 TWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 469 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
..+........... .. ......+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 258 ~~~~~~~~~~~~~~-----~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 258 EEFCRRLKEGTRMR-----AP-----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp HHHHHHHHHTCCCC-----CC-----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCccCC-----CC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 22222222221100 00 111236788899999999999999999999999987653
No 155
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-41 Score=347.21 Aligned_cols=249 Identities=21% Similarity=0.255 Sum_probs=192.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc-----CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM-----SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||+||+|.. .++..||+|.+... .....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 468899999999999995 46788999998643 234457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCC-----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhhCC
Q 008431 331 VPNGSLANLLHVRRAPG-----------------------------------QPGLDWPIRLKIIKGVAKGLAYLYKEFP 375 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~-----------------------------------~~~l~~~~~~~i~~~ia~gL~ylH~~~~ 375 (565)
+++|+|.+++....... ...+++..+..++.|++.||+|||+.
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-- 187 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ-- 187 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC--
Confidence 99999999985321100 01135677889999999999999998
Q ss_pred CCCCccCCCCCCCEEEcCCC--CcEEeccCCcccccc--------cccccccccccCCCccCC--CCCCcchhHHHHHHH
Q 008431 376 GVTLPHGHLKSSNVLLDNAY--EPLLTDYALVPIVNK--------EHAQLHMVAYKSPEFNQT--DGVTRKTDVWSLGIL 443 (565)
Q Consensus 376 ~~~ivHrDlkp~NILl~~~~--~~kl~DfGla~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gvi 443 (565)
+|+||||||+|||++.++ .+||+|||+++.... .....+|+.|+|||++.+ ..++.++|||||||+
T Consensus 188 --~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 188 --GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp --TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred --CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 999999999999998766 899999999976532 124467899999998765 678999999999999
Q ss_pred HHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 008431 444 ILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAV 523 (565)
Q Consensus 444 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl 523 (565)
+|||++|+.||.. ................ ...+... .....+.+++.+||+.||++|||+.|++
T Consensus 266 l~el~~g~~pf~~--------~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 266 LHLLLMGAVPFPG--------VNDADTISQVLNKKLC--FENPNYN------VLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHSSCSSCC--------SSHHHHHHHHHHCCCC--TTSGGGG------GSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHCCCCCCC--------CChHHHHHHHHhcccc--cCCcccc------cCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999962 1222222222222111 1111111 1123678899999999999999999998
Q ss_pred HH
Q 008431 524 EK 525 (565)
Q Consensus 524 ~~ 525 (565)
+.
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 73
No 156
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=335.37 Aligned_cols=240 Identities=23% Similarity=0.315 Sum_probs=177.0
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCH 94 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCC
Confidence 457899999999999996 578999999997432 2234679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 95 NGEMNRYLKNRVK----PFSENEARHFMHQIITGMLYLHSH----GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp TEEHHHHHHTCSS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999986432 489999999999999999999998 9999999999999999999999999998765432
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+|+.|+|||.+.+..++.++|||||||++|||++|+.||..... ........ .. +...
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~----~~---~~~~ 231 (278)
T 3cok_A 167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV--------KNTLNKVV----LA---DYEM 231 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC--------C-----CC----SS---CCCC
T ss_pred CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH--------HHHHHHHh----hc---ccCC
Confidence 234678999999999888899999999999999999999999963211 01111000 00 0011
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
+......+.+++.+||+.||++|||+.|+++
T Consensus 232 -----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 -----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1111236788999999999999999999865
No 157
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.7e-41 Score=338.97 Aligned_cols=245 Identities=20% Similarity=0.311 Sum_probs=196.6
Q ss_pred ceecccCceeEEEEEEe---CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 259 EVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
+.||+|+||+||+|... ++..||||.++... ....+++.+|+.+++.++||||+++++++ ..+..++||||+++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 38999999999999643 46789999987532 22356799999999999999999999999 66788999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc-
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH- 412 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~- 412 (565)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 102 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEES----NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred CCHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhC----CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 99999998643 389999999999999999999998 99999999999999999999999999987654331
Q ss_pred ------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcccc
Q 008431 413 ------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEVFD 485 (565)
Q Consensus 413 ------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 485 (565)
...+++.|+|||.+.+..++.++|||||||++|||+| |+.||... ..... ...+......
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~--------~~~~~-~~~~~~~~~~---- 239 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM--------KGSEV-TAMLEKGERM---- 239 (291)
T ss_dssp EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC--------CHHHH-HHHHHTTCCC----
T ss_pred cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCC--------CHHHH-HHHHHcCCCC----
Confidence 1234678999999888889999999999999999999 99998631 11121 1122221110
Q ss_pred ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 486 KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
.. +......+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 240 -~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 240 -GC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp -CC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred -CC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11 111224688899999999999999999999999988643
No 158
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=347.55 Aligned_cols=234 Identities=19% Similarity=0.268 Sum_probs=194.2
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc--------cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN--------VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 327 (565)
..+.||+|+||+||+|.. .+++.||||.+..... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEE
Confidence 457899999999999995 5788999999975321 1334678899999999999999999999999999999
Q ss_pred EeccCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 328 SDFVPNG-SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 328 ~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
|||+.+| +|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 108 ~e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLK----DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999877 9999997543 399999999999999999999998 99999999999999999999999999998
Q ss_pred ccccc---ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 407 IVNKE---HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 407 ~~~~~---~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
..... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... ..
T Consensus 179 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------------------~~ 239 (335)
T 3dls_A 179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------------------EA 239 (335)
T ss_dssp ECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------------------TT
T ss_pred ECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------------------hh
Confidence 76543 23468999999999888776 789999999999999999999996322110 00
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
...+ . ......+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~----~---~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 240 AIHP----P---YLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCC----S---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ccCC----C---cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0 0112367888999999999999999999875
No 159
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2e-41 Score=352.69 Aligned_cols=188 Identities=24% Similarity=0.356 Sum_probs=155.6
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCC-CCCccceEEEEEecC--ceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYRKE--EKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~lv~E~ 330 (565)
..+.||+|+||+||+|.. .+|+.||||++... .......+.+|+.+++++. |||||++++++...+ ..|+||||
T Consensus 13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~ 92 (388)
T 3oz6_A 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92 (388)
T ss_dssp EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecc
Confidence 357899999999999995 57899999998642 2334567889999999997 999999999998654 68999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
|+ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~----~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 93 ME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSG----GLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp CS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred cC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC----CEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 97 6999999753 389999999999999999999998 999999999999999999999999999976432
Q ss_pred -------------------------cccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 411 -------------------------EHAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 411 -------------------------~~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|++||.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 122468899999998876 678999999999999999999999996
No 160
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.5e-41 Score=351.97 Aligned_cols=241 Identities=17% Similarity=0.289 Sum_probs=191.3
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCC--CCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLS--HPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|...+++.||||++.... ....+.+.+|+.++++++ |||||++++++...+..|+||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 457899999999999998789999999987432 234567999999999996 5999999999999999999999 56
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 139 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~----~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 139 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp SEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTT----TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 889999998654 388999999999999999999998 999999999999995 578999999999876432
Q ss_pred -----ccccccccccCCCccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHh
Q 008431 412 -----HAQLHMVAYKSPEFNQT-----------DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 412 -----~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ......+....
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~-------~~~~~~~~~~~ 281 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAII 281 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC-------CCHHHHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhh-------hHHHHHHHHHh
Confidence 23468999999998754 46899999999999999999999999631 11122222222
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
..... ..... .....+.+++.+||+.||++|||+.|+++.
T Consensus 282 ~~~~~-----~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 DPNHE-----IEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CTTSC-----CCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Ccccc-----CCCCc-----cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 21110 00101 112367888999999999999999999865
No 161
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=346.23 Aligned_cols=258 Identities=21% Similarity=0.351 Sum_probs=202.6
Q ss_pred ccceecccCceeEEEEEE-----eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecC--ceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL-----LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE--EKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~E 329 (565)
..+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 467899999999999984 368899999998655555678999999999999999999999987644 7899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 125 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTK----RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp CCTTCBHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC----CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999986543 389999999999999999999998 99999999999999999999999999997764
Q ss_pred ccc-------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCcccccc------CCCC-CcchHHHHHHHh
Q 008431 410 KEH-------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQ------GKGA-NADLATWVNSVV 475 (565)
Q Consensus 410 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~------~~~~-~~~~~~~~~~~~ 475 (565)
... ...++..|+|||.+.+..++.++|||||||++|||+||+.|+..... .... .......+...+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 276 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHh
Confidence 332 23456779999998888899999999999999999999999753210 0000 000011111111
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
...... ..+......+.+++.+||+.||++|||+.|+++.|+++++.
T Consensus 277 ~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 277 KNNGRL----------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HTTCCC----------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCCCC----------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 111000 00112234688899999999999999999999999998754
No 162
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=348.25 Aligned_cols=255 Identities=15% Similarity=0.129 Sum_probs=199.6
Q ss_pred ccceecccCceeEEEEEEeC---------CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccc--------------
Q 008431 257 SAEVLGSGSFGSSYKAVLLT---------GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLP-------------- 313 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~-------------- 313 (565)
..+.||+|+||.||+|.... ++.||+|.+... +.+.+|+.++++++||||++
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~ 120 (352)
T 2jii_A 46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP 120 (352)
T ss_dssp EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence 45789999999999999653 789999998743 46889999999999999998
Q ss_pred -eEEEEEe-cCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE
Q 008431 314 -LIAFYYR-KEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL 391 (565)
Q Consensus 314 -l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl 391 (565)
+++++.. .+..++||||+ +|+|.+++..... ..+++..++.++.||+.||.|||+. +|+||||||+|||+
T Consensus 121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK---HVLSERSVLQVACRLLDALEFLHEN----EYVHGNVTAENIFV 192 (352)
T ss_dssp CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHHT----TCBCSCCCGGGEEE
T ss_pred chhhccccCCcEEEEEecCC-CcCHHHHHHhCCc---CCCCHHHHHHHHHHHHHHHHHHHhC----CccCCCCCHHHEEE
Confidence 6777776 67889999999 9999999986521 2499999999999999999999998 99999999999999
Q ss_pred cCCC--CcEEeccCCccccccc-----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccc
Q 008431 392 DNAY--EPLLTDYALVPIVNKE-----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLA 458 (565)
Q Consensus 392 ~~~~--~~kl~DfGla~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~ 458 (565)
+.++ .+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 9999999999765432 22367899999999999899999999999999999999999997432
Q ss_pred cCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 459 QGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. ...+....... .. ......++..... .....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 273 ~~---~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 338 (352)
T 2jii_A 273 PN---TEDIMKQKQKF-VD-KPGPFVGPCGHWI----RPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL 338 (352)
T ss_dssp TC---HHHHHHHHHHH-HH-SCCCEECTTSCEE----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cC---HHHHHHHHHhc-cC-ChhhhhhhccccC----CCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence 11 01111111111 11 1112211111100 11246888889999999999999999999999997664
No 163
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.3e-41 Score=339.64 Aligned_cols=243 Identities=22% Similarity=0.326 Sum_probs=192.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||.||+|... ++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 102 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA 102 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence 4578999999999999965 588999999976656667889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc----c
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK----E 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~----~ 411 (565)
|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..... .
T Consensus 103 l~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (302)
T 2j7t_A 103 VDAIMLELDR----GLTEPQIQVVCRQMLEALNFLHSK----RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR 174 (302)
T ss_dssp HHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhcC----CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence 9999876443 389999999999999999999998 999999999999999999999999998754321 2
Q ss_pred ccccccccccCCCcc-----CCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 412 HAQLHMVAYKSPEFN-----QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~-----~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
....+|+.|+|||++ ....++.++|||||||++|||++|+.||... ............... ....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~~~-~~~~- 244 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL--------NPMRVLLKIAKSDPP-TLLT- 244 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSCCC-CCSS-
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC--------CHHHHHHHHhccCCc-ccCC-
Confidence 344688999999987 4677899999999999999999999998631 222222222222111 1100
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
+......+.+++.+||+.||++|||+.|+++
T Consensus 245 -------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 -------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111236788999999999999999999865
No 164
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=338.11 Aligned_cols=252 Identities=20% Similarity=0.267 Sum_probs=192.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-----ccCHHHHHHHHHHHhcCC---CCCccceEEEEEecC-----
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-----NVGKEDFHEHMTRLGSLS---HPNLLPLIAFYYRKE----- 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~----- 322 (565)
..+.||+|+||+||+|+. .+++.||+|++.... ......+.+|+.++++++ ||||+++++++....
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~ 92 (308)
T 3g33_A 13 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREI 92 (308)
T ss_dssp EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEE
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCce
Confidence 457899999999999994 578999999987422 122356778888777664 999999999998765
Q ss_pred ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 323 EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 323 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 93 ~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 93 KVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHAN----CIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp EEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCTTTEEECTTSCEEECSC
T ss_pred eEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEcCCCCEEEeeC
Confidence 4799999997 699999986543 2489999999999999999999998 9999999999999999999999999
Q ss_pred CCccccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh--
Q 008431 403 ALVPIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE-- 477 (565)
Q Consensus 403 Gla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 477 (565)
|+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|++||... ............
T Consensus 165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~~ 236 (308)
T 3g33_A 165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN--------SEADQLGKIFDLIG 236 (308)
T ss_dssp SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS--------SHHHHHHHHHHHHC
T ss_pred ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHhC
Confidence 999866433 3456789999999998889999999999999999999999999631 122222222111
Q ss_pred -----cccCccccc--cccCC-CCC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 478 -----EWTGEVFDK--DMRGT-KSG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 478 -----~~~~~~~d~--~~~~~-~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+......+ ..... ... ......+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 237 LPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 011000000 00000 000 012246788999999999999999999875
No 165
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-40 Score=357.18 Aligned_cols=243 Identities=22% Similarity=0.298 Sum_probs=197.6
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|... +++.||||++... .......+.+|+.++++++|||||++++++.+.+..|+||||+++
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 105 (486)
T 3mwu_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105 (486)
T ss_dssp EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence 4578999999999999964 7899999998642 234567899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc---CCCCcEEeccCCcccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD---NAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~---~~~~~kl~DfGla~~~~~ 410 (565)
|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 106 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 99999987654 389999999999999999999998 999999999999995 456799999999986644
Q ss_pred c---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 E---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
. ....||+.|+|||++.+ .|+.++||||+||++|||++|++||.. ................. ..+.
T Consensus 177 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~~--~~~~ 245 (486)
T 3mwu_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--------KNEYDILKRVETGKYAF--DLPQ 245 (486)
T ss_dssp C----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCCCS--CSGG
T ss_pred CCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCCCC--CCcc
Confidence 3 34568999999998875 599999999999999999999999962 12222222222221110 0111
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.. .....+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~------~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WR------TISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG------GSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cC------CCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11 112367889999999999999999999875
No 166
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.3e-42 Score=357.26 Aligned_cols=243 Identities=17% Similarity=0.185 Sum_probs=186.7
Q ss_pred ccceecccCceeEEEEE-EeCCCeeEEEEeecc---CccCHHHHHHHH---HHHhcCCCCCccceE-------EEEEecC
Q 008431 257 SAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQM---SNVGKEDFHEHM---TRLGSLSHPNLLPLI-------AFYYRKE 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~~~~~ 322 (565)
..+.||+|+||+||+|. ..+|+.||||++... .....+.+.+|+ +.+++++|||||+++ +++...+
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 35789999999999999 467999999999743 233457789999 556666899999998 6666543
Q ss_pred -----------------ceEEEEeccCCCCHHHHHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCC
Q 008431 323 -----------------EKLLVSDFVPNGSLANLLHVRRAPG--QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGH 383 (565)
Q Consensus 323 -----------------~~~lv~E~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrD 383 (565)
..|+||||+ +|+|.+++....... ...++|..+..++.||+.||+|||+. +|+|||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~ivHrD 231 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY----GLVHTY 231 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT----TEECSC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC----CeecCC
Confidence 278999999 689999998643211 11245688889999999999999998 999999
Q ss_pred CCCCCEEEcCCCCcEEeccCCccccccc-ccccccccccCCCccCCC-----------CCCcchhHHHHHHHHHHHHcCC
Q 008431 384 LKSSNVLLDNAYEPLLTDYALVPIVNKE-HAQLHMVAYKSPEFNQTD-----------GVTRKTDVWSLGILILELLTGK 451 (565)
Q Consensus 384 lkp~NILl~~~~~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~DvwS~Gvil~el~tg~ 451 (565)
|||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||+
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 9999999999999999999999865443 33456 899999998877 8999999999999999999999
Q ss_pred CCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH--HHHHh
Q 008431 452 FPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE--KIMEL 529 (565)
Q Consensus 452 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i 529 (565)
.||........ ...+. +... .....+.+++.+||+.||++|||+.|+++ .++++
T Consensus 311 ~Pf~~~~~~~~-----------------~~~~~-~~~~------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 311 LPITKDAALGG-----------------SEWIF-RSCK------NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp CCC------CC-----------------SGGGG-SSCC------CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred CCCcccccccc-----------------hhhhh-hhcc------CCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 99963221100 00111 0011 11136788899999999999999999986 34444
No 167
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.1e-41 Score=358.81 Aligned_cols=249 Identities=16% Similarity=0.255 Sum_probs=187.6
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecC------ceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE------EKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv 327 (565)
..+.||+|+||+||+|.. .+++.||||++... .....+++.+|+.+++.++|||||++++++.... ..|+|
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 457899999999999985 46889999999753 2334567899999999999999999999997553 46999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
|||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~----~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999976 57766642 288999999999999999999998 999999999999999999999999999987
Q ss_pred cccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh-cc----
Q 008431 408 VNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE-EW---- 479 (565)
Q Consensus 408 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 479 (565)
.... ....+|+.|+|||++.+..|+.++|||||||++|||++|+.||... +..+.+...... +.
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~--------~~~~~~~~i~~~lg~p~~~ 285 (464)
T 3ttj_A 214 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR--------DYIDQWNKVIEQLGTPCPE 285 (464)
T ss_dssp ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCSCCHH
T ss_pred cCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHhcCCCCHH
Confidence 6543 3457899999999999999999999999999999999999999631 111111111110 00
Q ss_pred ------------------cC-----ccccccccCCCC--CHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 480 ------------------TG-----EVFDKDMRGTKS--GEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 480 ------------------~~-----~~~d~~~~~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.. ..+...+..... .......+.+++.+||+.||++|||++|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 000000000000 01124568899999999999999999999864
No 168
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.2e-41 Score=338.56 Aligned_cols=255 Identities=20% Similarity=0.284 Sum_probs=192.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc--cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence 3578999999999999964 589999999865322 2246788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 87 TVLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKH----NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp EHHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred chHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999887543 389999999999999999999998 9999999999999999999999999999776532
Q ss_pred --ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh-----------
Q 008431 412 --HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE----------- 477 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----------- 477 (565)
....+|..|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+......
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-----VDQLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHHHHHT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhccccccccccccc
Confidence 23467899999998765 6789999999999999999999999963211 1111111111100
Q ss_pred -cccCccccccccCCCC----CHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 478 -EWTGEVFDKDMRGTKS----GEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 478 -~~~~~~~d~~~~~~~~----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.+......+....... .......+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000000000 01122357889999999999999999999763
No 169
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-40 Score=329.31 Aligned_cols=240 Identities=18% Similarity=0.293 Sum_probs=190.7
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 3578999999999999965 78999999987432 2345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 95 GGELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRH----MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp SCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH----CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred CCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 999999997654 389999999999999999999999 9999999999999999999999999998776443
Q ss_pred --ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+++.|+|||.+.+..+ +.++|||||||++|||++|+.||.. ........... .... .+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~-~~~~------~~ 230 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD--------EHVPTLFKKIR-GGVF------YI 230 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHH-HCCC------CC
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC--------CcHHHHHHHhh-cCcc------cC
Confidence 23467889999999887765 6899999999999999999999962 12222222221 1110 00
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~-----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 P-----EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp C-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred c-----hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 1112367788999999999999999999874
No 170
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.2e-41 Score=363.60 Aligned_cols=246 Identities=22% Similarity=0.256 Sum_probs=199.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..++||+|+||.||+|... +|+.||+|++... .......+.+|+.+|+.++|||||++++++.+.+..|+||||++
T Consensus 188 ~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 3578999999999999964 7899999999742 23345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++..... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 gg~L~~~l~~~~~---~~l~e~~~~~i~~qIl~aL~yLH~~----gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 268 GGDLKFHIYHMGQ---AGFPEARAVFYAAEICCGLEDLHRE----RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp SCBHHHHHHSSSS---CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred CCcHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHC----CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 9999999976432 2489999999999999999999998 9999999999999999999999999999876433
Q ss_pred --ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....||+.|+|||++.+..|+.++|||||||++|||++|+.||...... ... ..+........ ..+.
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~-~~i~~~i~~~~------~~~p 409 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKR-EEVERLVKEVP------EEYS 409 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCH-HHHHHHHHHCC------CCCC
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhH-HHHHHHhhccc------ccCC
Confidence 3457899999999999989999999999999999999999999732110 111 11222221110 0010
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRW-----DLREAVEK 525 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~~ 525 (565)
......+.+++.+||+.||++|| ++.||++.
T Consensus 410 -----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 -----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred -----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11123678889999999999999 78888653
No 171
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.8e-41 Score=334.23 Aligned_cols=254 Identities=16% Similarity=0.179 Sum_probs=200.2
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEE-ecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY-RKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||.||+|+. .+++.||||.+.... ..+++.+|+.+++.++|++++..+.++. ..+..++||||+ +|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (296)
T 3uzp_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CC
Confidence 357899999999999995 678899999986532 2356899999999999998887777664 556789999999 89
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~ 411 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 90 ~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 90 SLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSK----NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp BHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999975433 399999999999999999999998 99999999999999 58899999999999765432
Q ss_pred -----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc
Q 008431 412 -----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480 (565)
Q Consensus 412 -----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (565)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+....... .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~-~ 238 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--RQKYERISEKKMST-P 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHHHHS-C
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh--hhhhhhhcccccCC-c
Confidence 234678999999999999999999999999999999999999974322111 11111111111110 0
Q ss_pred CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 481 GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 481 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.. .+.. .....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 239 ~~----~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 239 IE----VLCK-----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HH----HHTT-----TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hH----HHHh-----hCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 00 0000 11136888999999999999999999999999997664
No 172
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.3e-41 Score=342.70 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=198.9
Q ss_pred ccceecccCceeEEEEEE------eCCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL------LTGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||.||+|.. .++..||||.+... ......++.+|+.++++++||||+++++++...+..++|||
T Consensus 34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 457899999999999983 35778999999643 23345679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCC--CCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCC
Q 008431 330 FVPNGSLANLLHVRRAPG--QPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYAL 404 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGl 404 (565)
|+++|+|.+++....... ...+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+|||+
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~----~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~ 189 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN----HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC----CeecCcCCHhHEEEecCCCcceEEECcccc
Confidence 999999999998754321 13489999999999999999999998 9999999999999984 45699999999
Q ss_pred ccccccc------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhh
Q 008431 405 VPIVNKE------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVRE 477 (565)
Q Consensus 405 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 477 (565)
++..... ....+++.|+|||++....++.++|||||||++|||+| |+.||... ............
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~--------~~~~~~~~~~~~ 261 (327)
T 2yfx_A 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK--------SNQEVLEFVTSG 261 (327)
T ss_dssp HHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC--------CHHHHHHHHHTT
T ss_pred ccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc--------CHHHHHHHHhcC
Confidence 8654322 23456789999999888889999999999999999998 99998621 122222222111
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 478 EWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 478 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
. .. .. +......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 262 ~-~~-----~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 G-RM-----DP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp C-CC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-CC-----CC-----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 1 10 00 011123678899999999999999999999999988654
No 173
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.7e-41 Score=335.41 Aligned_cols=244 Identities=21% Similarity=0.294 Sum_probs=193.9
Q ss_pred cceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 258 AEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
..+||+|+||.||+|.. .++..||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++|+|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 35899999999999995 46889999999876555667899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC-CCCcEEeccCCccccccc----
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN-AYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DfGla~~~~~~---- 411 (565)
.+++..... ...+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 107 ~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~ 180 (295)
T 2clq_A 107 SALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDN----QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180 (295)
T ss_dssp HHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred HHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhC----CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence 999986532 22477889999999999999999998 9999999999999987 899999999998765432
Q ss_pred ccccccccccCCCccCCC--CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 HAQLHMVAYKSPEFNQTD--GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~--~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....+++.|+|||++... .++.++|||||||++|||++|+.||..... ........... . ..+.+.
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~-~-----~~~~~~ 248 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE------PQAAMFKVGMF-K-----VHPEIP 248 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS------HHHHHHHHHHH-C-----CCCCCC
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc------hhHHHHhhccc-c-----cccccc
Confidence 344678999999987654 388999999999999999999999963211 01111111110 0 011111
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
......+.+++.+||+.||++|||+.|+++
T Consensus 249 -----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 -----ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 112236778899999999999999999975
No 174
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=9.6e-41 Score=358.56 Aligned_cols=243 Identities=24% Similarity=0.349 Sum_probs=193.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|... ++..||+|++.... ......+.+|+.+++.++|||||+++++|.+....|+||||+++
T Consensus 41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 4678999999999999964 78899999987532 33467899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCCcccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYALVPIVNK 410 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGla~~~~~ 410 (565)
|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 121 g~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 121 GELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKH----NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 99999987654 389999999999999999999998 9999999999999976 45599999999977653
Q ss_pred c---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 E---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
. ....||+.|+|||++. ..|+.++||||+||++|||++|++||.. ............... ....+.
T Consensus 192 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~--~~~~~~ 260 (494)
T 3lij_A 192 QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG--------QTDQEILRKVEKGKY--TFDSPE 260 (494)
T ss_dssp TBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHTCC--CCCSGG
T ss_pred CccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHhCCC--CCCchh
Confidence 3 3456899999999876 4699999999999999999999999962 222223322222211 111111
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
... ....+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~~------~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 261 WKN------VSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GTT------SCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ccc------CCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111 12367888999999999999999999864
No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.6e-41 Score=333.41 Aligned_cols=239 Identities=19% Similarity=0.275 Sum_probs=197.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 4578999999999999965 57789999986421 2335679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHER----KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 999999998654 389999999999999999999998 9999999999999999999999999998655432
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+++.|+|||++.+..++.++|||||||++|||++|+.||.. .............. ....
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~~~~~~-------~~~~- 232 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS--------PSHTETHRRIVNVD-------LKFP- 232 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTTC-------CCCC-
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC--------CCHhHHHHHHhccc-------cCCC-
Confidence 345678999999999998999999999999999999999999962 11222222222111 0111
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
......+.+++.+||+.||++|||+.|+++
T Consensus 233 ----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 ----PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 111236778999999999999999999986
No 176
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8e-41 Score=358.44 Aligned_cols=243 Identities=25% Similarity=0.342 Sum_probs=198.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..++||+|+||+||+|... +++.||||++.... ....+.+.+|+.++++++|||||++++++.+.+..++||||+.
T Consensus 30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 4578999999999999965 78999999986432 3456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~ 409 (565)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 110 ~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 110 GGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKN----KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp SCBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999997543 389999999999999999999998 99999999999999 567899999999987654
Q ss_pred cc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 410 KE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 410 ~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
.. ....||+.|+|||++.+ .++.++||||+||++|||++|++||.. ......+......... ...+
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~~~~~--~~~~ 249 (484)
T 3nyv_A 181 ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG--------ANEYDILKKVEKGKYT--FELP 249 (484)
T ss_dssp CCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCC--CCSG
T ss_pred cccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHcCCCC--CCCc
Confidence 43 23468999999998865 699999999999999999999999962 1222222222222111 0011
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
... .....+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~------~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 250 QWK------KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GGG------GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ccc------cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 111 122367889999999999999999999864
No 177
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.2e-41 Score=335.88 Aligned_cols=240 Identities=20% Similarity=0.284 Sum_probs=197.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 98 (294)
T 2rku_A 19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 98 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence 3578999999999999965 57889999987532 2335678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 99 RRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp TCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999987654 389999999999999999999998 9999999999999999999999999998765422
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+.......... .+
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~~~-------~~ 234 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEY-------SI 234 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHTTCC-------CC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHhhccC-------CC
Confidence 234678899999999888899999999999999999999999962 122222222211110 01
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 P-----KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp C-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c-----cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 1112367788899999999999999999875
No 178
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.9e-41 Score=336.14 Aligned_cols=248 Identities=23% Similarity=0.276 Sum_probs=196.0
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEe--cCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR--KEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~E~~ 331 (565)
..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.. ....++||||+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~ 89 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence 3578999999999999964 78899999997532 3345679999999999999999999998865 46789999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCC-----CccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVT-----LPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~-----ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
++|+|.+++...... ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~----~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 90 EGGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHRR----SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp TTEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHH----C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHHHHHhcc----cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999764321 22489999999999999999999998 6 9999999999999999999999999987
Q ss_pred cccccc----cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 407 IVNKEH----AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 407 ~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
...... ...+++.|+|||.+.+..++.++|||||||++|||+||+.||... ........ +..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~-i~~~~~~- 234 (279)
T 2w5a_A 165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF--------SQKELAGK-IREGKFR- 234 (279)
T ss_dssp HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHH-HHHTCCC-
T ss_pred eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc--------CHHHHHHH-Hhhcccc-
Confidence 654332 345788999999998888999999999999999999999998632 12222222 2222111
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIME 528 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~ 528 (565)
.+. ......+.+++.+||+.||++|||+.|+++.+..
T Consensus 235 ----~~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 235 ----RIP-----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp ----CCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred ----cCC-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 111 1112367888999999999999999999886543
No 179
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-41 Score=346.30 Aligned_cols=245 Identities=21% Similarity=0.272 Sum_probs=195.4
Q ss_pred ccceecccCceeEEEEEE----eCCCeeEEEEeeccC----ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL----LTGPAMVVKRFRQMS----NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 327 (565)
..+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 137 (355)
T 1vzo_A 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI 137 (355)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEE
T ss_pred EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEE
Confidence 467899999999999997 378999999986432 23456678899999999 699999999999999999999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 138 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 138 LDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKL----GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp ECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 99999999999998654 389999999999999999999998 999999999999999999999999999876
Q ss_pred cccc-----ccccccccccCCCccCC--CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc
Q 008431 408 VNKE-----HAQLHMVAYKSPEFNQT--DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480 (565)
Q Consensus 408 ~~~~-----~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (565)
.... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... ...............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~-- 282 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE----KNSQAEISRRILKSE-- 282 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS----CCCHHHHHHHHHHCC--
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc----cchHHHHHHHHhccC--
Confidence 5322 23468999999998875 3578999999999999999999999963221 112222222222211
Q ss_pred CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHHH
Q 008431 481 GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRW-----DLREAVEKI 526 (565)
Q Consensus 481 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-----s~~evl~~L 526 (565)
+.. +......+.+++.+||+.||++|| |+.|+++..
T Consensus 283 -----~~~-----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 -----PPY-----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -----CCC-----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -----CCC-----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 011 111223677899999999999999 999987653
No 180
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.2e-41 Score=343.17 Aligned_cols=250 Identities=16% Similarity=0.193 Sum_probs=185.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc--cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|.. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 116 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE- 116 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-
Confidence 457899999999999985 4788999999874322 234568899999999999999999999999999999999998
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc-----CCCCcEEeccCCcccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD-----NAYEPLLTDYALVPIV 408 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-----~~~~~kl~DfGla~~~ 408 (565)
|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++..
T Consensus 117 ~~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 117 NDLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSR----RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred CCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 59999997654 389999999999999999999998 999999999999994 5556999999999765
Q ss_pred ccc----ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc-ccCc
Q 008431 409 NKE----HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE-WTGE 482 (565)
Q Consensus 409 ~~~----~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 482 (565)
... ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||... .....+....... ....
T Consensus 188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD--------SEIDQLFKIFEVLGLPDD 259 (329)
T ss_dssp C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCCCT
T ss_pred CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC--------CHHHHHHHHHHHhCCCch
Confidence 432 334578999999988764 5899999999999999999999999631 1112222221110 0000
Q ss_pred cc------cccc----cCC-CCCH------HHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VF------DKDM----RGT-KSGE------GEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~------d~~~----~~~-~~~~------~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. .+.. ... .... .....+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 0000 000 0000 01246788999999999999999999875
No 181
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.5e-41 Score=345.77 Aligned_cols=191 Identities=23% Similarity=0.367 Sum_probs=168.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|... ++..||+|.+... .....+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 4578999999999999965 7889999998754 2333567999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--c
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--H 412 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--~ 412 (565)
+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 117 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999998654 3899999999999999999999841 7999999999999999999999999998755322 3
Q ss_pred cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 413 AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 413 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
...+|+.|+|||++.+..++.++|||||||++|||+||+.||.
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 231 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP 231 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 4578999999999999999999999999999999999999996
No 182
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.6e-41 Score=355.17 Aligned_cols=243 Identities=20% Similarity=0.268 Sum_probs=184.0
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC--------ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS--------NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 327 (565)
..+.||+|+||+||+|.. .+++.||||.+.... ......+.+|+.+|++++|||||++++++. .+..++|
T Consensus 139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEE
T ss_pred EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEE
Confidence 467899999999999995 467899999987432 111235889999999999999999999974 4568999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC---CCcEEeccCC
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA---YEPLLTDYAL 404 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DfGl 404 (565)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 218 ~e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 218 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp EECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred EEcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 99999999998886433 489999999999999999999998 99999999999999654 4599999999
Q ss_pred ccccccc---ccccccccccCCCccCC---CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc
Q 008431 405 VPIVNKE---HAQLHMVAYKSPEFNQT---DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 405 a~~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
++..... ....||+.|+|||++.. ..++.++|||||||++|||+||+.||..... ...+...+ ...
T Consensus 289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~----~~~~~~~i----~~~ 360 (419)
T 3i6u_A 289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQI----TSG 360 (419)
T ss_dssp TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS----SCCHHHHH----HTT
T ss_pred ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc----hHHHHHHH----hcC
Confidence 9876543 24568999999998753 6788999999999999999999999963211 11122211 111
Q ss_pred ccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 479 WTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 479 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. ... +.... .....+.+++.+||+.||++|||+.|+++
T Consensus 361 ~~-~~~-~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 361 KY-NFI-PEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CC-CCC-HHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC-CCC-chhhc-----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 10 000 00000 11236888999999999999999999976
No 183
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1e-40 Score=335.23 Aligned_cols=242 Identities=23% Similarity=0.338 Sum_probs=199.2
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 457899999999999985 468899999997543 344678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 106 ~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 175 (303)
T 3a7i_A 106 SALDLLEPG------PLDETQIATILREILKGLDYLHSE----KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175 (303)
T ss_dssp EHHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence 999998642 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred -ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccC
Q 008431 412 -HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRG 490 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 490 (565)
....+++.|+|||++.+..++.++|||||||++|||++|+.||... ........ ...... +.+..
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~-~~~~~~-----~~~~~ 241 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL--------HPMKVLFL-IPKNNP-----PTLEG 241 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHH-HHHSCC-----CCCCS
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc--------CHHHHHHH-hhcCCC-----CCCcc
Confidence 2346789999999999989999999999999999999999998631 11121111 111111 11111
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 008431 491 TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIM 527 (565)
Q Consensus 491 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~ 527 (565)
.....+.+++.+||+.||++|||+.|+++..-
T Consensus 242 -----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 242 -----NYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp -----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred -----ccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11236788899999999999999999987643
No 184
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.9e-41 Score=342.75 Aligned_cols=240 Identities=20% Similarity=0.281 Sum_probs=197.5
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 124 (335)
T 2owb_A 45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR 124 (335)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence 4578999999999999965 57889999987532 2345678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 125 ~~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 125 RRSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRN----RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp TCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999987653 389999999999999999999998 9999999999999999999999999999765422
Q ss_pred ---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
....+|..|+|||++.+..++.++|||||||++|||++|+.||.. ............... .+
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~--------~~~~~~~~~~~~~~~-------~~ 260 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--------SCLKETYLRIKKNEY-------SI 260 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC--------SSHHHHHHHHHHTCC-------CC
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC--------CCHHHHHHHHhcCCC-------CC
Confidence 234678999999999888899999999999999999999999962 122222222221110 01
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.. .....+.+++.+||+.||++|||+.|+++.
T Consensus 261 ~~-----~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 PK-----HINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp CT-----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred Cc-----cCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 111357788899999999999999999874
No 185
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-40 Score=342.34 Aligned_cols=243 Identities=19% Similarity=0.307 Sum_probs=195.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCcc--------CHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNV--------GKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLL 326 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 326 (565)
..+.||+|+||.||+|... +|+.||||+++..... ..+.+.+|+.+++++ +||||+++++++......++
T Consensus 98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 177 (365)
T 2y7j_A 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177 (365)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence 4578999999999999975 7999999998753211 134678999999998 79999999999999999999
Q ss_pred EEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 327 VSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 327 v~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
||||+++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.
T Consensus 178 v~e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~----gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHAN----NIVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp EECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEECCCCCEEEEecCccc
Confidence 999999999999998643 389999999999999999999998 99999999999999999999999999987
Q ss_pred ccccc---ccccccccccCCCccC------CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh
Q 008431 407 IVNKE---HAQLHMVAYKSPEFNQ------TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE 477 (565)
Q Consensus 407 ~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 477 (565)
..... ....||+.|+|||++. ...++.++|||||||++|||+||+.||.. .............
T Consensus 249 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~--------~~~~~~~~~i~~~ 320 (365)
T 2y7j_A 249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH--------RRQILMLRMIMEG 320 (365)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHT
T ss_pred ccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC--------CCHHHHHHHHHhC
Confidence 66533 3456899999999874 33588999999999999999999999962 1112222222111
Q ss_pred cccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 478 EWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 478 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
. . ....+.... ....+.+++.+||+.||++|||+.|+++
T Consensus 321 ~-~-~~~~~~~~~------~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 321 Q-Y-QFSSPEWDD------RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp C-C-CCCHHHHSS------SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred C-C-CCCCccccc------CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1 011111111 1236788999999999999999999986
No 186
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.6e-41 Score=335.54 Aligned_cols=254 Identities=17% Similarity=0.193 Sum_probs=198.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEE-EecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY-YRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|.. .+++.||||.+.... ....+.+|+.+++.++|++++..++++ ...+..++||||+ +|
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (296)
T 4hgt_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CC
Confidence 457899999999999995 578899999876432 234588999999999999888877776 4566789999999 99
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~ 411 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 90 ~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 90 SLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSK----NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp BHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99999975433 399999999999999999999998 99999999999999 78999999999999765432
Q ss_pred -----------ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc
Q 008431 412 -----------HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480 (565)
Q Consensus 412 -----------~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (565)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+....... .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~-~ 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--RQKYERISEKKMST-P 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHHHHS-C
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh--hhhhhhhhcccccc-h
Confidence 234678999999999999999999999999999999999999974332111 11111111111000 0
Q ss_pred CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 481 GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 481 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
.....+ .....+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 239 ~~~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 239 IEVLCK---------GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHTT---------TSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhc---------cCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 000000 01136888999999999999999999999999997654
No 187
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-41 Score=345.14 Aligned_cols=248 Identities=22% Similarity=0.293 Sum_probs=187.9
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecC------ceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE------EKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv 327 (565)
..+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+.+++.++||||+++++++...+ ..|+|
T Consensus 29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 108 (367)
T 1cm8_A 29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108 (367)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEE
Confidence 457899999999999996 57899999998642 2233467899999999999999999999997653 45999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
|||+ +++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 109 MPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAA----GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC----CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999 78999999752 389999999999999999999998 999999999999999999999999999987
Q ss_pred cccc-ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh-ccc----
Q 008431 408 VNKE-HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE-EWT---- 480 (565)
Q Consensus 408 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 480 (565)
.... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||... +....+...... +..
T Consensus 178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS--------DHLDQLKEIMKVTGTPPAEF 249 (367)
T ss_dssp CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCCCHHH
T ss_pred cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHhcCCCCHHH
Confidence 6543 34578999999998766 67999999999999999999999999631 111222111110 000
Q ss_pred ----------------CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 481 ----------------GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 481 ----------------~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.......+... .......+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASI--LTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGT--CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHH--CCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000000000 01122467889999999999999999999873
No 188
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.1e-40 Score=329.95 Aligned_cols=242 Identities=19% Similarity=0.299 Sum_probs=194.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (276)
T 2yex_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90 (276)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence 4578999999999999965 78999999987432 334577999999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc---
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE--- 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~--- 411 (565)
+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 91 ~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 91 ELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGI----GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp EGGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC----CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 9999886432 389999999999999999999998 9999999999999999999999999998765322
Q ss_pred ---ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 412 ---HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
....+++.|+|||.+.+..+ +.++|||||||++|||++|+.||...... ......|. ... . .. +.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~----~~~-~--~~-~~ 230 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDWK----EKK-T--YL-NP 230 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT---SHHHHHHH----TTC-T--TS-TT
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHhh----hcc-c--cc-Cc
Confidence 23467899999999887665 77999999999999999999999732110 01111111 110 0 00 00
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~------~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 W------KKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp G------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred h------hhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0 111236778999999999999999999865
No 189
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-41 Score=360.96 Aligned_cols=184 Identities=20% Similarity=0.347 Sum_probs=148.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEec-----CceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK-----EEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~ 328 (565)
..++||+|+||+||+|.. .+++.||||++... .....+++.+|+.+|++++|||||++++++... ...|+||
T Consensus 57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 457899999999999995 47899999999643 223456799999999999999999999999543 4689999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+. |+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 137 e~~~-~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~----~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 137 EIAD-SDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSA----GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CCCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eccc-cchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhC----CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9984 79999997543 399999999999999999999998 9999999999999999999999999999875
Q ss_pred ccc-------------------------------ccccccccccCCCcc-CCCCCCcchhHHHHHHHHHHHHcC
Q 008431 409 NKE-------------------------------HAQLHMVAYKSPEFN-QTDGVTRKTDVWSLGILILELLTG 450 (565)
Q Consensus 409 ~~~-------------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DvwS~Gvil~el~tg 450 (565)
... ....||+.|+|||++ ....|+.++|||||||++|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 421 223568899999975 566799999999999999999993
No 190
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-40 Score=358.14 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=198.4
Q ss_pred cceecccCceeEEEEEEe-CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
.++||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++|||||++++++.+.+..|+||||+++
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 468999999999999964 68999999997432 23456789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
|+|.+++...... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 270 g~L~~~l~~~~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~----gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 270 GDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEHLHQR----NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp CBHHHHHHTSSTT-SCSCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCHHHHHHHhhcc-cccccHHHHHHHHHHHHHHHHHHHHc----CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 9999999764321 23599999999999999999999998 9999999999999999999999999999876433
Q ss_pred --ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccccc
Q 008431 412 --HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMR 489 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 489 (565)
....||+.|+|||++.+..|+.++|||||||++|||+||+.||..... ............... . ..
T Consensus 345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~----~~~~~~~~~~i~~~~-~------~~- 412 (543)
T 3c4z_A 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRVLEQA-V------TY- 412 (543)
T ss_dssp CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC----CCCHHHHHHHHHHCC-C------CC-
T ss_pred ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc----chhHHHHHHHHhhcc-c------CC-
Confidence 234789999999999999999999999999999999999999973211 112222222222211 0 00
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCH-----HHHHH
Q 008431 490 GTKSGEGEMLKLLKIGMCCCEWNAERRWDL-----REAVE 524 (565)
Q Consensus 490 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~-----~evl~ 524 (565)
+......+.+++.+||+.||++||++ .|+++
T Consensus 413 ----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 413 ----PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ----CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11112367788899999999999965 56653
No 191
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.1e-41 Score=346.08 Aligned_cols=243 Identities=18% Similarity=0.245 Sum_probs=191.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||+||+|... +++.||+|.+..... .+.+|++++.++ +||||+++++++.+.+..|+||||+++|
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg 101 (342)
T 2qr7_A 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG 101 (342)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence 4578999999999999964 688999999975432 245688888887 7999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC----CCcEEeccCCcccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA----YEPLLTDYALVPIVNK 410 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~----~~~kl~DfGla~~~~~ 410 (565)
+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++....
T Consensus 102 ~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~----givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 102 ELLDKILRQK-----FFSEREASAVLFTITKTVEYLHAQ----GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp BHHHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 9999997543 389999999999999999999998 99999999999998443 3499999999986543
Q ss_pred c----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 411 E----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 411 ~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
. ....+|+.|+|||++.+..|+.++|||||||++|||++|+.||.... ............... .. . ..
T Consensus 173 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~~-~~-~-~~ 244 (342)
T 2qr7_A 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-----DDTPEEILARIGSGK-FS-L-SG 244 (342)
T ss_dssp TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-----TSCHHHHHHHHHHCC-CC-C-CS
T ss_pred CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-----cCCHHHHHHHHccCC-cc-c-Cc
Confidence 3 24567899999999888778999999999999999999999996321 112222332222211 10 0 00
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.. .......+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~-----~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 245 GY-----WNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TT-----TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 01122367888999999999999999999864
No 192
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.9e-41 Score=339.29 Aligned_cols=245 Identities=19% Similarity=0.258 Sum_probs=194.5
Q ss_pred cceecccCceeEEEEEEe-CCCeeEEEEeecc--CccCHHHHHHHHHHHhcCC-CCCccceEEEEEecCceEEEEeccCC
Q 008431 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
.+.||+|+||+||+|... +++.||+|++... .......+.+|+.+++.+. ||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 478999999999999965 6899999998743 2344678999999999995 69999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCCcccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYALVPIVNK 410 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGla~~~~~ 410 (565)
|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 114 ~~L~~~~~~~~~---~~~~~~~~~~i~~ql~~~L~~LH~~----givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 114 GEIFSLCLPELA---EMVSENDVIRLIKQILEGVYYLHQN----NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred CcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC----CeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999998854322 2499999999999999999999998 9999999999999987 78999999999987654
Q ss_pred c---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 E---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
. ....+|+.|+|||++....++.++|||||||++|||++|+.||... ............. .....+.
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~--------~~~~~~~~i~~~~--~~~~~~~ 256 (327)
T 3lm5_A 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE--------DNQETYLNISQVN--VDYSEET 256 (327)
T ss_dssp -------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHTC--CCCCTTT
T ss_pred ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CchHHHHHHHhcc--cccCchh
Confidence 3 2346899999999999999999999999999999999999999621 1122221111111 0000010
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 257 ~------~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 257 F------SSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp T------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred h------cccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1 1122367888999999999999999998753
No 193
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1e-41 Score=352.85 Aligned_cols=247 Identities=18% Similarity=0.119 Sum_probs=177.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc---cCHHHHHHHH---HHHhcCCCCCccceE-------EEEEecC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN---VGKEDFHEHM---TRLGSLSHPNLLPLI-------AFYYRKE 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~~~~~ 322 (565)
..+.||+|+||+||+|... +++.||||++..... ...+.+.+|+ ..|+. +||||++++ +++...+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 4578999999999999964 788999999986432 2345677784 55566 799988755 4554332
Q ss_pred -----------------ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhhCCCCCC
Q 008431 323 -----------------EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIR------LKIIKGVAKGLAYLYKEFPGVTL 379 (565)
Q Consensus 323 -----------------~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~gL~ylH~~~~~~~i 379 (565)
..|+||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||++ +|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~----~i 215 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSK----GL 215 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT----TE
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC----CC
Confidence 3799999999 899999986532 2455556 78889999999999998 99
Q ss_pred ccCCCCCCCEEEcCCCCcEEeccCCcccccccc-cccccccccCCCccCC--CCCCcchhHHHHHHHHHHHHcCCCCccc
Q 008431 380 PHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH-AQLHMVAYKSPEFNQT--DGVTRKTDVWSLGILILELLTGKFPANY 456 (565)
Q Consensus 380 vHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gvil~el~tg~~p~~~ 456 (565)
+||||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999998776554 5667799999999887 6799999999999999999999999974
Q ss_pred cccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 457 LAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
........ | ............... .........+.+++.+||+.||++|||+.|+++
T Consensus 296 ~~~~~~~~-----~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 296 VTPGIKGS-----W-----KRPSLRVPGTDSLAF-GSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CCTTCTTC-----C-----CBCCTTSCCCCSCCC-TTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cCcccccc-----h-----hhhhhhhccccccch-hhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 32211100 0 000000000000000 000122346788899999999999999999975
No 194
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4e-41 Score=335.84 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=191.2
Q ss_pred ccceecccCceeEEEEEEe--CCC--eeEEEEeecc---CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL--TGP--AMVVKRFRQM---SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||+||+|.+. ++. .||+|.++.. .....+.+.+|+.++++++||||+++++++...+ .++|||
T Consensus 22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e 100 (291)
T 1u46_A 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE 100 (291)
T ss_dssp EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence 4578999999999999854 233 5899988643 2234567999999999999999999999987654 899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 101 LAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLESK----RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp CCTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred cccCCCHHHHHHhccC----CcCHHHHHHHHHHHHHHHHHHHhC----CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999986543 389999999999999999999998 99999999999999999999999999987664
Q ss_pred ccc-------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccC
Q 008431 410 KEH-------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTG 481 (565)
Q Consensus 410 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (565)
... ...++..|+|||++.+..++.++|||||||++|||++ |+.||.. ......+..........
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~--------~~~~~~~~~~~~~~~~~ 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG--------LNGSQILHKIDKEGERL 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT--------CCHHHHHHHHHTSCCCC
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc--------CCHHHHHHHHHccCCCC
Confidence 321 2345678999999888889999999999999999999 9999862 22223333222221110
Q ss_pred ccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 482 EVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 482 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
+ ........+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 245 ----~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 245 ----P------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----C------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----C------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0 01112246888999999999999999999999999987654
No 195
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-40 Score=357.18 Aligned_cols=243 Identities=23% Similarity=0.343 Sum_probs=194.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc-------------cCHHHHHHHHHHHhcCCCCCccceEEEEEecC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN-------------VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 322 (565)
..+.||+|+||+||+|... ++..||+|.+..... ...+.+.+|+.++++++|||||++++++.+..
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 119 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK 119 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 4578999999999999964 678999999874321 23567999999999999999999999999999
Q ss_pred ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC---CcEE
Q 008431 323 EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY---EPLL 399 (565)
Q Consensus 323 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~---~~kl 399 (565)
..|+|||||++|+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++ .+||
T Consensus 120 ~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 120 YFYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKH----NIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeEeCCCcHHHEEEecCCCCccEEE
Confidence 9999999999999999997654 399999999999999999999998 999999999999998765 6999
Q ss_pred eccCCccccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh
Q 008431 400 TDYALVPIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 400 ~DfGla~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
+|||+++..... ....||+.|+|||++. ..++.++||||+||++|||++|++||.. ......+.....
T Consensus 191 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~--------~~~~~~~~~i~~ 261 (504)
T 3q5i_A 191 VDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG--------QNDQDIIKKVEK 261 (504)
T ss_dssp CCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHH
T ss_pred EECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHc
Confidence 999999876543 3456899999999876 4699999999999999999999999962 222223322222
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
...... .+.... ....+.+++.+||+.||++|||+.|+++.
T Consensus 262 ~~~~~~--~~~~~~------~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 262 GKYYFD--FNDWKN------ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCCCCC--HHHHTT------SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCC--ccccCC------CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 211000 001111 12367889999999999999999999864
No 196
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=340.13 Aligned_cols=250 Identities=18% Similarity=0.283 Sum_probs=191.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||.||+|.... .+|+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 45789999999999998643 59999986432 233456889999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc----
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK---- 410 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~---- 410 (565)
+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 115 ~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~----~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 115 TLYSVVRDAKI----VLDVNKTRQIAQEIVKGMGYLHAK----GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp EHHHHTTSSCC----CCCSHHHHHHHHHHHHHHHHHHHT----TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC----CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999975432 489999999999999999999998 999999999999998 67999999999865421
Q ss_pred -----cccccccccccCCCccCC---------CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh
Q 008431 411 -----EHAQLHMVAYKSPEFNQT---------DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 411 -----~~~~~~t~~y~aPE~~~~---------~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
.....+++.|+|||++.. ..++.++|||||||++|||++|+.||.. ...........
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~--------~~~~~~~~~~~- 256 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT--------QPAEAIIWQMG- 256 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS--------CCHHHHHHHHH-
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC--------CCHHHHHHHhc-
Confidence 123357899999998764 4578999999999999999999999962 11222222221
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccCCC
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERDND 535 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~~~ 535 (565)
.... +...... ....+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 257 ~~~~-----~~~~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 257 TGMK-----PNLSQIG----MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp TTCC-----CCCCCSS----CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred cCCC-----CCCCcCC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111 1111101 112577889999999999999999999999999876533
No 197
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=333.74 Aligned_cols=241 Identities=21% Similarity=0.318 Sum_probs=193.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..+.||+|+||.||+|... +|+.||+|.+... ...+.+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 110 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS 110 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCC
Confidence 4578999999999999965 5899999999753 245679999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc----
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE---- 411 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~---- 411 (565)
|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 111 L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 182 (314)
T 3com_A 111 VSDIIRLRNK----TLTEDEIATILQSTLKGLEYLHFM----RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 182 (314)
T ss_dssp HHHHHHHHTC----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC----CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc
Confidence 9999975432 389999999999999999999998 9999999999999999999999999998765432
Q ss_pred ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCC
Q 008431 412 HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGT 491 (565)
Q Consensus 412 ~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 491 (565)
....+++.|+|||++.+..++.++|||||||++|||++|+.||... ......... ..........
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~-~~~~~~~~~~------ 247 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI--------HPMRAIFMI-PTNPPPTFRK------ 247 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHH-HHSCCCCCSS------
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHH-hcCCCcccCC------
Confidence 3346789999999998889999999999999999999999998631 111111111 1111111100
Q ss_pred CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 492 KSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 492 ~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
+......+.+++.+||+.||++|||+.|+++
T Consensus 248 --~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 --PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0111236788999999999999999999976
No 198
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.8e-40 Score=349.71 Aligned_cols=190 Identities=22% Similarity=0.297 Sum_probs=165.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcC------CCCCccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL------SHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~lv~E 329 (565)
..++||+|+||+||+|... +++.||||+++.. ....+.+.+|+.+++.+ +|+||+++++++...+..++|||
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 179 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFE 179 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEEC
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEe
Confidence 4578999999999999854 5889999998743 23345677888887776 67799999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC--cEEeccCCccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE--PLLTDYALVPI 407 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~--~kl~DfGla~~ 407 (565)
|+. |+|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++.
T Consensus 180 ~~~-~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 180 LLS-MNLYELIKKNKFQ---GFSLPLVRKFAHSILQCLDALHKN----RIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp CCC-CBHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHHH----TEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred ccC-CCHHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 996 6999999865432 489999999999999999999999 9999999999999999887 99999999976
Q ss_pred cccc-ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 408 VNKE-HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 408 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||++||.
T Consensus 252 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 252 EHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp TTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 5443 35578999999999999899999999999999999999999996
No 199
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=341.53 Aligned_cols=252 Identities=21% Similarity=0.225 Sum_probs=192.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc-----cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN-----VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~ 330 (565)
..+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEc
Confidence 457899999999999995 4689999999864221 1134688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~ 410 (565)
+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~~~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 94 MET-DLEVIIKDNSL----VLTPSHIKAYMLMTLQGLEYLHQH----WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp CSE-EHHHHHTTCCS----SCCSSHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred CCC-CHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHHC----CEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 985 89998875432 488899999999999999999998 999999999999999999999999999987643
Q ss_pred c----ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc-------
Q 008431 411 E----HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE------- 478 (565)
Q Consensus 411 ~----~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 478 (565)
. ....+|+.|+|||++.+ ..++.++|||||||++|||++|.+||... .....+.......
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~--------~~~~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD--------SDLDQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCCCTTT
T ss_pred CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHHHcCCCChhh
Confidence 2 24567899999998865 45899999999999999999999998621 1222222222110
Q ss_pred ccCccccccc---cCC-CCC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 479 WTGEVFDKDM---RGT-KSG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 479 ~~~~~~d~~~---~~~-~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
+....-.+.. ... ..+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000000 000 000 1112468889999999999999999999875
No 200
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.6e-41 Score=342.33 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=192.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc--cCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN--VGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 108 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH 108 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCc
Confidence 4578999999999999964 588999999865332 2245688999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~----~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 109 TILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSH----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EHHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred chHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC----CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99988876433 389999999999999999999998 9999999999999999999999999999765432
Q ss_pred --ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHH----------HHhh-h
Q 008431 412 --HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVN----------SVVR-E 477 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~----------~~~~-~ 477 (565)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...+. .... .
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI----DQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhhhHhhhc
Confidence 344678999999988765 7899999999999999999999999632110 00000000 0000 0
Q ss_pred cccCccccccccCCCCC----HHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 478 EWTGEVFDKDMRGTKSG----EGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 478 ~~~~~~~d~~~~~~~~~----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
........+.+...... ......+.+++.+||+.||++|||+.|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00111111111111100 0123468899999999999999999998763
No 201
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=347.96 Aligned_cols=199 Identities=21% Similarity=0.341 Sum_probs=155.5
Q ss_pred hHHHhhccceecccCceeEEEEEEe---CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEe--cCceE
Q 008431 251 NDLLRASAEVLGSGSFGSSYKAVLL---TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR--KEEKL 325 (565)
Q Consensus 251 ~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 325 (565)
.+......++||+|+||+||+|+.. ++..||||++... .....+.+|+.+|++++|||||++++++.. ....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 3333334568999999999999965 5789999998643 234578999999999999999999999965 56789
Q ss_pred EEEeccCCCCHHHHHhhcCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE----cCCCCc
Q 008431 326 LVSDFVPNGSLANLLHVRRA----PGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL----DNAYEP 397 (565)
Q Consensus 326 lv~E~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----~~~~~~ 397 (565)
+||||+. |+|.+++..... .....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~----~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN----WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC----CEeCCCcCHHHeEEecCCCCCCcE
Confidence 9999997 588888864321 1112489999999999999999999998 99999999999999 778999
Q ss_pred EEeccCCccccccc-------ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccc
Q 008431 398 LLTDYALVPIVNKE-------HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANY 456 (565)
Q Consensus 398 kl~DfGla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~ 456 (565)
||+|||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||+||++||..
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 99999999876432 23467899999998876 4589999999999999999999999963
No 202
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.8e-40 Score=366.83 Aligned_cols=249 Identities=20% Similarity=0.332 Sum_probs=199.0
Q ss_pred hhccceecccCceeEEEEEEeC----CCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 255 RASAEVLGSGSFGSSYKAVLLT----GPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 255 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
+...+.||+|+||+||+|.+.. +..||+|+++... ....+.|.+|+.++++++|||||++++++ ..+..++|||
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~lv~E 470 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIME 470 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-ecCceEEEEE
Confidence 3456889999999999999643 3468999886432 23346799999999999999999999998 4567899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 471 ~~~~g~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~----givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 471 LCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESK----RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp CCTTCBHHHHHHHTTT----TCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred cCCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC----CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999986542 389999999999999999999998 99999999999999999999999999998764
Q ss_pred ccc-----cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcccCcc
Q 008431 410 KEH-----AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEWTGEV 483 (565)
Q Consensus 410 ~~~-----~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (565)
... ...+++.|+|||++....++.++|||||||++|||++ |..||... ...+........... .
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~--------~~~~~~~~i~~~~~~-~- 612 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERL-P- 612 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC--------CHHHHHHHHHHTCCC-C-
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHcCCCC-C-
Confidence 432 2345678999999988899999999999999999997 99998631 222222222211110 0
Q ss_pred ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhc
Q 008431 484 FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKE 531 (565)
Q Consensus 484 ~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~ 531 (565)
. +......+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 613 ----~-----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 613 ----M-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp ----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----C-----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1 11122467889999999999999999999999999864
No 203
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.5e-40 Score=331.49 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=181.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc-cC-HHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN-VG-KEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|.. .+++.||+|+++.... .. .+.+.++...++.++||||+++++++.+.+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 457899999999999996 5788999999975322 22 2334455566888999999999999999999999999997
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
|+|.+++...... ...+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 165 (290)
T 3fme_A 90 TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKL---SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165 (290)
T ss_dssp EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHS---CCCCCCCSGGGCEECTTCCEEBCCC-----------
T ss_pred cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcC---CeecCCCCHHHEEECCCCCEEEeecCCccccccccc
Confidence 5998887653211 124999999999999999999999863 7999999999999999999999999999766443
Q ss_pred -ccccccccccCCCcc----CCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 412 -HAQLHMVAYKSPEFN----QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~----~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
....+|+.|+|||++ ....++.++|||||||++|||+||+.||... ......+.........
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-------~~~~~~~~~~~~~~~~------ 232 (290)
T 3fme_A 166 KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-------GTPFQQLKQVVEEPSP------ 232 (290)
T ss_dssp ----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC-------SCHHHHHHHHHHSCCC------
T ss_pred ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc-------CchHHHHHHHhccCCC------
Confidence 234688999999985 5667899999999999999999999999621 1112222222222111
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.... ......+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 QLPA----DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred Cccc----ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0100 111236788999999999999999999987
No 204
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.4e-40 Score=329.10 Aligned_cols=252 Identities=19% Similarity=0.280 Sum_probs=193.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 3478999999999999965 78999999986432 2334678999999999999999999999999999999999997
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~----~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 86 QDLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSH----RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp EEHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred CCHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 699999986542 2488999999999999999999998 9999999999999999999999999998765422
Q ss_pred --ccccccccccCCCccCCCC-CCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh-cccCccc---
Q 008431 412 --HAQLHMVAYKSPEFNQTDG-VTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE-EWTGEVF--- 484 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~~~~-~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--- 484 (565)
....+|+.|+|||++.+.. ++.++|||||||++|||+||+.||... ............ +......
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 159 TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD--------SEIDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCCCTTTSTT
T ss_pred ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc--------cHHHHHHHHHHHhCCCchhhhhH
Confidence 2346788999999887655 799999999999999999999999631 111222222211 0000000
Q ss_pred -------cccccCCC-CC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 485 -------DKDMRGTK-SG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 485 -------d~~~~~~~-~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+...... .. ......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00010000 00 011246788999999999999999999976
No 205
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.1e-40 Score=348.53 Aligned_cols=189 Identities=22% Similarity=0.326 Sum_probs=161.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEec-----CceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK-----EEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~ 328 (565)
..+.||+|+||+||+|.. .+++.||||++... .....+.+.+|+.+|++++||||+++++++... +..|+||
T Consensus 30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~ 109 (432)
T 3n9x_A 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL 109 (432)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence 457899999999999995 46788999999753 223356799999999999999999999999766 5689999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+. |+|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 110 e~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~----givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 110 EIAD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHES----GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp ECCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ecCC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9996 59999997533 399999999999999999999999 9999999999999999999999999999865
Q ss_pred ccc--------------------------ccccccccccCCCcc-CCCCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 409 NKE--------------------------HAQLHMVAYKSPEFN-QTDGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 409 ~~~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
... ....+|+.|+|||++ ....|+.++|||||||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 432 344678999999975 56679999999999999999998665553
No 206
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.6e-40 Score=368.35 Aligned_cols=239 Identities=20% Similarity=0.225 Sum_probs=197.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc---CccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEecc
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM---SNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFV 331 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~ 331 (565)
..++||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++..+ +||||+++++++.+.+..|+||||+
T Consensus 345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~ 424 (674)
T 3pfq_A 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 424 (674)
T ss_dssp EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECC
T ss_pred EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCc
Confidence 4578999999999999954 6788999999742 234456788999999987 7999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccc-
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNK- 410 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~- 410 (565)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 425 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~----gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 425 NGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSK----GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC----CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 9999999998754 399999999999999999999998 999999999999999999999999999985322
Q ss_pred ---cccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 ---EHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ---~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.....||+.|+|||++.+..|+.++|||||||++|||++|+.||.. .+............. .
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~--------~~~~~~~~~i~~~~~-------~ 560 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG--------EDEDELFQSIMEHNV-------A 560 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHSSCC-------C
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC--------CCHHHHHHHHHhCCC-------C
Confidence 2345789999999999999999999999999999999999999962 222333333332211 0
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCH-----HHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL-----REAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~-----~evl~ 524 (565)
+ +......+.+++.+||+.||++||++ +||.+
T Consensus 561 ~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 561 Y-----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp C-----CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred C-----CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 11122467888999999999999987 66653
No 207
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.9e-41 Score=335.59 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=177.8
Q ss_pred ccceecccCceeEEEEE-EeCCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..+.||+|+||.||+|. ..+++.||||.+.... ....+++.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 45789999999999998 4578999999986432 334567899999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc
Q 008431 335 SLANLLHVRRA---PGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 335 sL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~ 411 (565)
+|.+++..... .....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN----GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC----CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 99999975211 1123489999999999999999999998 9999999999999999999999999998654322
Q ss_pred ---------ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc-
Q 008431 412 ---------HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT- 480 (565)
Q Consensus 412 ---------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 480 (565)
....+|+.|+|||++.. ..++.++|||||||++|||++|+.||..... .............
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~~~~ 246 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP--------MKVLMLTLQNDPPS 246 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG--------GGHHHHHHTSSCCC
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch--------hhHHHHHhccCCCc
Confidence 23357889999998765 5689999999999999999999999973211 1111111111100
Q ss_pred --CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 481 --GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 481 --~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
....++.... .....+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~-----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LETGVQDKEMLK-----KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC-----CCCC-----CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccccchhhh-----hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0111111111 11236788899999999999999999976
No 208
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-40 Score=345.94 Aligned_cols=257 Identities=18% Similarity=0.250 Sum_probs=189.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEec--------------
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK-------------- 321 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------------- 321 (565)
..+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++|||||++++++...
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~ 86 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH 86 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccc
Confidence 457899999999999995 5789999999875422 234799999999999999999998543
Q ss_pred ------------------------CceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCC
Q 008431 322 ------------------------EEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGV 377 (565)
Q Consensus 322 ------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~ 377 (565)
...++||||++ |+|.+.+...... ...+++..+..++.|++.||+|||+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---- 160 (383)
T 3eb0_A 87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLFRAVGFIHSL---- 160 (383)
T ss_dssp -----------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHTT----
T ss_pred ccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence 23789999998 5888887643211 12499999999999999999999998
Q ss_pred CCccCCCCCCCEEEc-CCCCcEEeccCCccccccc---ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCC
Q 008431 378 TLPHGHLKSSNVLLD-NAYEPLLTDYALVPIVNKE---HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKF 452 (565)
Q Consensus 378 ~ivHrDlkp~NILl~-~~~~~kl~DfGla~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~ 452 (565)
+|+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 999999999999998 6889999999999865433 345678999999987764 58999999999999999999999
Q ss_pred CccccccCCCCCcchHHHHHHHhhh---c----------ccCccccccccCCC----CCHHHHHHHHHHHhhccccCcCC
Q 008431 453 PANYLAQGKGANADLATWVNSVVRE---E----------WTGEVFDKDMRGTK----SGEGEMLKLLKIGMCCCEWNAER 515 (565)
Q Consensus 453 p~~~~~~~~~~~~~~~~~~~~~~~~---~----------~~~~~~d~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~ 515 (565)
||... ...+.+...... . ......-+.+.... .+......+.+++.+||+.||++
T Consensus 241 pf~~~--------~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (383)
T 3eb0_A 241 LFSGE--------TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDL 312 (383)
T ss_dssp SSCCS--------SHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGG
T ss_pred CCCCC--------ChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhh
Confidence 99731 111111111110 0 00000001110000 00112246889999999999999
Q ss_pred CCCHHHHHHH--HHHhhc
Q 008431 516 RWDLREAVEK--IMELKE 531 (565)
Q Consensus 516 RPs~~evl~~--L~~i~~ 531 (565)
|||+.|+++. +++++.
T Consensus 313 R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 313 RINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp SCCHHHHHTSGGGHHHHH
T ss_pred CCCHHHHhcCHHHHHHHh
Confidence 9999999853 444443
No 209
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.9e-40 Score=335.07 Aligned_cols=249 Identities=20% Similarity=0.241 Sum_probs=191.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CCCccceEEEEEe--cCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYR--KEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lv~E~~~ 332 (565)
..+.||+|+||+||+|.. .+++.||||.+.. ...+.+.+|+.++++++ ||||+++++++.+ ....++||||++
T Consensus 40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 116 (330)
T 3nsz_A 40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN 116 (330)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred EEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC
Confidence 457899999999999985 5788999999863 34578999999999997 9999999999987 567899999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC-CcEEeccCCccccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY-EPLLTDYALVPIVNKE 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-~~kl~DfGla~~~~~~ 411 (565)
+++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++.....
T Consensus 117 ~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 117 NTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHSM----GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp CCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred chhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhC----CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 9999998752 88899999999999999999998 999999999999999776 8999999999765433
Q ss_pred ---ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccC------
Q 008431 412 ---HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTG------ 481 (565)
Q Consensus 412 ---~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 481 (565)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+.... .........
T Consensus 185 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~---~~~l~~~~-~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 185 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN---YDQLVRIA-KVLGTEDLYDYIDKY 260 (330)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH---HHHHHHHH-HHHCHHHHHHHHHHT
T ss_pred CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch---HHHHHHHH-HhcCCchhhhHHHHh
Confidence 34567889999998776 67899999999999999999999998521100 00011100 000000000
Q ss_pred -cccccc---------------ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 482 -EVFDKD---------------MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 482 -~~~d~~---------------~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
...++. .............+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0000111112357889999999999999999999976
No 210
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.5e-40 Score=340.37 Aligned_cols=249 Identities=16% Similarity=0.250 Sum_probs=185.7
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecC------ceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE------EKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv 327 (565)
..+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..|+|
T Consensus 29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv 108 (371)
T 2xrw_A 29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 108 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence 4578999999999999854 68899999997532 233467889999999999999999999997654 67999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
|||++ |+|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 109 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 109 MELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSA----GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHC----CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99997 588888852 288999999999999999999998 999999999999999999999999999987
Q ss_pred cccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh-------
Q 008431 408 VNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE------- 477 (565)
Q Consensus 408 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 477 (565)
.... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+......
T Consensus 177 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~~~~~~~ 248 (371)
T 2xrw_A 177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD--------HIDQWNKVIEQLGTPCPE 248 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHC-CCCCCHH
T ss_pred cccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHHHhCCCCHH
Confidence 6543 34568899999999999899999999999999999999999996321 11111111110
Q ss_pred ---------------ccc--C----ccccccccCCCC--CHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 478 ---------------EWT--G----EVFDKDMRGTKS--GEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 478 ---------------~~~--~----~~~d~~~~~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
... . ..+......... .......+.+++.+||+.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 249 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 0 000000000000 01224578899999999999999999999874
No 211
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.9e-40 Score=349.99 Aligned_cols=253 Identities=17% Similarity=0.195 Sum_probs=198.2
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCC-CccceEEEEEecCceEEEEeccCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP-NLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
..++||+|+||.||+|.. .+++.||||++..... ..++.+|+++++.++|+ +|..+..++...+..++||||+ +|
T Consensus 11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~ 87 (483)
T 3sv0_A 11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GP 87 (483)
T ss_dssp CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CC
Confidence 457899999999999995 5789999998765322 34588999999999875 4555555666778889999999 99
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE---cCCCCcEEeccCCccccccc
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL---DNAYEPLLTDYALVPIVNKE 411 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl---~~~~~~kl~DfGla~~~~~~ 411 (565)
+|.+++..... .+++..++.++.||+.||.|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 88 sL~~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~----gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 88 SLEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSK----SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp BHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC----CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999975433 399999999999999999999998 99999999999999 68899999999999865433
Q ss_pred c-----------cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc
Q 008431 412 H-----------AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480 (565)
Q Consensus 412 ~-----------~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (565)
. ...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~-----~~~~~~~~~i~~~~~- 233 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA-----GTKKQKYEKISEKKV- 233 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC-----SSHHHHHHHHHHHHH-
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc-----hhHHHHHHHHhhccc-
Confidence 2 44688999999999999999999999999999999999999974321 112222222211110
Q ss_pred CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhcc
Q 008431 481 GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKER 532 (565)
Q Consensus 481 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~ 532 (565)
...+...... ....+.+++..||+.||++||++.+|++.|+++...
T Consensus 234 ~~~~~~l~~~------~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 234 ATSIEALCRG------YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HSCHHHHHTT------SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccHHHHhcC------CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0000100011 123688899999999999999999999999998654
No 212
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.8e-40 Score=337.56 Aligned_cols=255 Identities=20% Similarity=0.240 Sum_probs=192.2
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEec--------CceE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK--------EEKL 325 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~~~ 325 (565)
..+.||+|+||+||+|.. .+|+.||+|++.... ......+.+|+.+++.++||||+++++++... +..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 100 (351)
T 3mi9_A 21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 100 (351)
T ss_dssp EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence 457899999999999996 578999999986432 23356788999999999999999999999873 4689
Q ss_pred EEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCc
Q 008431 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV 405 (565)
Q Consensus 326 lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla 405 (565)
+||||+++ +|.+.+..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 101 lv~e~~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 101 LVFDFCEH-DLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHRN----KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp EEEECCSE-EHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEeccCC-CHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC----CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 99999975 88888765433 399999999999999999999998 9999999999999999999999999999
Q ss_pred cccccc--------ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh
Q 008431 406 PIVNKE--------HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 406 ~~~~~~--------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
+..... ....+|+.|+|||++.+ ..++.++|||||||++|||+||++||.... .......+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~ 246 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQLCG 246 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhC
Confidence 765321 23457899999998765 558999999999999999999999996311 0111111111111
Q ss_pred hcc---cCccccc----cc---cCCCCC-HHH------HHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 477 EEW---TGEVFDK----DM---RGTKSG-EGE------MLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 477 ~~~---~~~~~d~----~~---~~~~~~-~~~------~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
... ....-.. .+ ...... ... ...+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 100 0000000 00 000000 111 1347889999999999999999999774
No 213
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.9e-40 Score=341.94 Aligned_cols=252 Identities=20% Similarity=0.271 Sum_probs=186.5
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCcc-----------CHHHHHHHHHHHhcCCCCCccceEEEEEecC---
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNV-----------GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE--- 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--- 322 (565)
..+.||+|+||.||+|...+|..||||++...... ..+.+.+|+.++++++||||+++++++...+
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 26 VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTT
T ss_pred EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCC
Confidence 35789999999999999888999999998642211 1267999999999999999999999996533
Q ss_pred --ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEe
Q 008431 323 --EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLT 400 (565)
Q Consensus 323 --~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~ 400 (565)
..|+||||++ |+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQRI----VISPQHIQYFMYHILLGLHVLHEA----GVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cceEEEEEccCC-CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC----cCEecCCChHHEEEcCCCCEEEE
Confidence 4799999998 689988875432 489999999999999999999998 99999999999999999999999
Q ss_pred ccCCccccccc---ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh
Q 008431 401 DYALVPIVNKE---HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 401 DfGla~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
|||+++..... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||... .....+.....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~--------~~~~~~~~i~~ 248 (362)
T 3pg1_A 177 DFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS--------TFYNQLNKIVE 248 (362)
T ss_dssp CTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHH
T ss_pred ecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHH
Confidence 99999754433 33467889999998776 67899999999999999999999999631 11122221111
Q ss_pred hccc--------------CccccccccCCCC------CHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 477 EEWT--------------GEVFDKDMRGTKS------GEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 477 ~~~~--------------~~~~d~~~~~~~~------~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.... ...+......... .......+.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000 0000000000000 01112467889999999999999999999763
No 214
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.5e-40 Score=338.11 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=195.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC-ccCHHHHHHHHHH-HhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS-NVGKEDFHEHMTR-LGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||+||+|.. .+|+.||||+++... .....++..|+.. ++.++||||+++++++...+..++||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 457899999999999995 578899999997532 2234456666665 7889999999999999999999999999975
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
+|.+++...... ...+++..+..++.||+.||+|||+.+ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 -~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 209 (340)
T 3an0_A 135 -SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKL---SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA 209 (340)
T ss_dssp -EHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHH
T ss_pred -cHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcC---CeecCCCCHHHEEECCCCCEEEeeCCCceecccccc
Confidence 999988753211 124999999999999999999999752 7999999999999999999999999998766433
Q ss_pred -ccccccccccCCCccC----CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 412 -HAQLHMVAYKSPEFNQ----TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~~----~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
....+|+.|+|||++. ...++.++|||||||++|||+||+.||... ......+......... ....
T Consensus 210 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~-------~~~~~~~~~~~~~~~~-~~~~- 280 (340)
T 3an0_A 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW-------GTPFQQLKQVVEEPSP-QLPA- 280 (340)
T ss_dssp HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC-------SCHHHHHHHHHHSCCC-CCCG-
T ss_pred cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc-------cchHHHHHHHhcCCCC-CCCc-
Confidence 2346899999999854 447899999999999999999999999621 1112222222222111 0000
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH--HHHHhhccC
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE--KIMELKERD 533 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~--~L~~i~~~~ 533 (565)
......+.+++.+||+.||++|||+.|+++ .+.......
T Consensus 281 --------~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 321 (340)
T 3an0_A 281 --------DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKG 321 (340)
T ss_dssp --------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTTSC
T ss_pred --------ccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCcccccccc
Confidence 112246888999999999999999999987 454444333
No 215
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.1e-40 Score=347.07 Aligned_cols=261 Identities=22% Similarity=0.270 Sum_probs=189.1
Q ss_pred hccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecC------ceEEEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKE------EKLLVS 328 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 328 (565)
...++||+|+||+||+|+.. +|+.||||++.... ..+.+|+++|++++|||||+++++|.... ..++||
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 34578999999999999964 68999999986532 22347999999999999999999986532 367999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC-CCcEEeccCCccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA-YEPLLTDYALVPI 407 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-~~~kl~DfGla~~ 407 (565)
||+++ +|.+.+...... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+++.
T Consensus 133 e~~~~-~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYSRA-KQTLPVIYVKLYMYQLFRSLAYIHSF----GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp ECCCE-EHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHTT----TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred hcccc-cHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 99985 677666532111 12499999999999999999999998 99999999999999965 5689999999986
Q ss_pred cccc---ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHH-------hh
Q 008431 408 VNKE---HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSV-------VR 476 (565)
Q Consensus 408 ~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 476 (565)
.... ....+|+.|+|||++.+. .|+.++|||||||++|||++|++||..... ...+...+... +.
T Consensus 207 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCHHHHH
T ss_pred cccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCHHHHH
Confidence 5432 345689999999988664 799999999999999999999999963110 01111111110 00
Q ss_pred h--cccCccccccccCCC----CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH--HHHhh
Q 008431 477 E--EWTGEVFDKDMRGTK----SGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK--IMELK 530 (565)
Q Consensus 477 ~--~~~~~~~d~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~ 530 (565)
. ....+...+.+.... ........+.+++.+||+.||++|||+.|+++. ++++.
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 0 000111111111100 001112468899999999999999999999863 44443
No 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-40 Score=344.13 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=175.7
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEec------CceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK------EEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lv 327 (565)
..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++... ...|+|
T Consensus 33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv 112 (367)
T 2fst_X 33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 112 (367)
T ss_dssp EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence 457899999999999985 57889999998643 223456788999999999999999999999754 457999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
+||+ +++|.+++... .+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 113 ~e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~----givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 113 THLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSA----DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC----CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 9999 68999988642 389999999999999999999998 999999999999999999999999999987
Q ss_pred cccc-ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh-ccc----
Q 008431 408 VNKE-HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE-EWT---- 480 (565)
Q Consensus 408 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 480 (565)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||... +....+...... +..
T Consensus 182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~--------~~~~~l~~i~~~~g~p~~~~ 253 (367)
T 2fst_X 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT--------DHIDQLKLILRLVGTPGAEL 253 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCSCCHHH
T ss_pred ccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHhCCCCHHH
Confidence 6443 34578999999998776 67899999999999999999999999631 111212111110 000
Q ss_pred -Ccccc-------ccccCCC-CCH-----HHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 481 -GEVFD-------KDMRGTK-SGE-----GEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 481 -~~~~d-------~~~~~~~-~~~-----~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
..+.. ..+.... ... .....+.+++.+||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00000 0000000 000 112357889999999999999999999864
No 217
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.8e-40 Score=344.60 Aligned_cols=256 Identities=21% Similarity=0.273 Sum_probs=188.3
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCc------eEEEEec
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEE------KLLVSDF 330 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lv~E~ 330 (565)
..++||+|+||+||+|+...+..+|+|++...... ..+|+++++.++|||||+++++|...+. .++||||
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 46789999999999999877777999998653222 2369999999999999999999976543 7899999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc-CCCCcEEeccCCccccc
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD-NAYEPLLTDYALVPIVN 409 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DfGla~~~~ 409 (565)
++++.+......... ...+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++...
T Consensus 120 ~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~----~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 120 VPETVYRASRHYAKL--KQTMPMLLIKLYMYQLLRSLAYIHSI----GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp CSEEHHHHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred cCccHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC----CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 987544333321111 12489999999999999999999998 999999999999999 79999999999998754
Q ss_pred cc---ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh---c----
Q 008431 410 KE---HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE---E---- 478 (565)
Q Consensus 410 ~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~---- 478 (565)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|++||... +....+...... .
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~--------~~~~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE--------SGIDQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCCCHHH
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHhCCCCHHH
Confidence 32 345678999999987654 5899999999999999999999999631 111111111110 0
Q ss_pred ------ccCccccccccCCC----CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH--HHHhh
Q 008431 479 ------WTGEVFDKDMRGTK----SGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK--IMELK 530 (565)
Q Consensus 479 ------~~~~~~d~~~~~~~----~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~--L~~i~ 530 (565)
......-+...... ........+.+++.+||+.||++|||+.|+++. +++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 00000001110000 001122468899999999999999999999874 44443
No 218
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.2e-40 Score=328.52 Aligned_cols=243 Identities=21% Similarity=0.282 Sum_probs=195.2
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCc---------cCHHHHHHHHHHHhcCC-CCCccceEEEEEecCceE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN---------VGKEDFHEHMTRLGSLS-HPNLLPLIAFYYRKEEKL 325 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 325 (565)
..+.||+|+||.||+|... +++.||||.+..... ...+.+.+|+.+++++. ||||+++++++...+..+
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 100 (298)
T 1phk_A 21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF 100 (298)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEE
Confidence 3578999999999999964 688999999874321 12356889999999996 999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCc
Q 008431 326 LVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV 405 (565)
Q Consensus 326 lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla 405 (565)
+||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 101 LVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHKL----NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCcceEEEcCCCcEEEecccch
Confidence 9999999999999998653 389999999999999999999998 9999999999999999999999999998
Q ss_pred cccccc---ccccccccccCCCccC------CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQ------TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR 476 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 476 (565)
...... ....+++.|+|||++. ...++.++|||||||++|||++|+.||.. ............
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~ 243 (298)
T 1phk_A 172 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--------RKQMLMLRMIMS 243 (298)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHH
T ss_pred hhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC--------ccHHHHHHHHhc
Confidence 765433 3346789999999864 45688999999999999999999999862 112222222222
Q ss_pred hcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 477 EEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 477 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.... ...+.. ......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~--~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNYQ--FGSPEW------DDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCCC--CCTTTG------GGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCcc--cCcccc------cccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 2110 101111 122246888999999999999999999865
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=332.53 Aligned_cols=242 Identities=21% Similarity=0.324 Sum_probs=188.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEe------cCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYR------KEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~------~~~~~lv~ 328 (565)
..+.||+|+||.||+|.. .+++.||+|.+... ....+.+.+|+.+++++ +||||+++++++.. .+..++||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~ 106 (326)
T 2x7f_A 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEE
Confidence 457899999999999996 47889999998753 33457899999999998 79999999999987 45789999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 107 e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 107 EFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGLSHLHQH----KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp ECCTTEEHHHHHHHSGG---GCCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EcCCCCcHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHC----CccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 99999999999986432 2489999999999999999999998 9999999999999999999999999998765
Q ss_pred ccc----ccccccccccCCCccC-----CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcc
Q 008431 409 NKE----HAQLHMVAYKSPEFNQ-----TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW 479 (565)
Q Consensus 409 ~~~----~~~~~t~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (565)
... ....+++.|+|||++. ...++.++|||||||++|||+||+.||... .............
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~--------~~~~~~~~~~~~~- 250 (326)
T 2x7f_A 180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM--------HPMRALFLIPRNP- 250 (326)
T ss_dssp -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS--------CHHHHHHHHHHSC-
T ss_pred CcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC--------cHHHHHHHhhcCc-
Confidence 432 2346789999999876 567899999999999999999999998621 1111111111111
Q ss_pred cCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 480 TGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 480 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
. +...... ....+.+++.+||+.||++|||+.|+++
T Consensus 251 ~-----~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 251 A-----PRLKSKK----WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp C-----CCCSCSC----SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c-----ccCCccc----cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1 1111111 1236788889999999999999999987
No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=327.08 Aligned_cols=241 Identities=18% Similarity=0.305 Sum_probs=190.8
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC----ccCHHHHHHHHHHHhcCCCCCccceEEEEEe--cCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS----NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR--KEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~E 329 (565)
..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++|||
T Consensus 9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (305)
T 2wtk_C 9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME 88 (305)
T ss_dssp CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence 457899999999999995 478899999997432 2335679999999999999999999999853 457899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++| |.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 89 ~~~~~-l~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~----~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 89 YCVCG-MQEMLDSVPE---KRFPVCQAHGYFCQLIDGLEYLHSQ----GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp CCSEE-HHHHHHHSTT---CSCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred hccCC-HHHHHHhCcc---cccCHHHHHHHHHHHHHHHHHHHHC----CeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 99876 7777765432 2489999999999999999999998 99999999999999999999999999987653
Q ss_pred cc------ccccccccccCCCccCCCC--CCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccC
Q 008431 410 KE------HAQLHMVAYKSPEFNQTDG--VTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTG 481 (565)
Q Consensus 410 ~~------~~~~~t~~y~aPE~~~~~~--~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (565)
.. ....+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.. .............. .
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~--------~~~~~~~~~i~~~~-~- 230 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG--------DNIYKLFENIGKGS-Y- 230 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC--------SSHHHHHHHHHHCC-C-
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC--------chHHHHHHHHhcCC-C-
Confidence 21 2345789999999887643 37899999999999999999999962 22222222222111 0
Q ss_pred ccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 482 EVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 482 ~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.+.. .....+.+++.+||+.||++|||+.|+++.
T Consensus 231 -----~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 -----AIPG-----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----CCCS-----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----CCCC-----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0111 112367788999999999999999999975
No 221
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.6e-39 Score=322.41 Aligned_cols=242 Identities=22% Similarity=0.308 Sum_probs=195.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeecc--CccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQM--SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 105 (287)
T 2wei_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG 105 (287)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCC
Confidence 4578999999999999965 7889999998743 234567899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC---CCcEEeccCCcccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA---YEPLLTDYALVPIVNK 410 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~---~~~kl~DfGla~~~~~ 410 (565)
++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++.....
T Consensus 106 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 106 GELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKH----NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 99999987654 389999999999999999999998 99999999999999754 4699999999876543
Q ss_pred c---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 411 E---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 411 ~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
. ....+++.|+|||.+.+ .++.++|||||||++|||++|+.||.. .................. .+.
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~--------~~~~~~~~~~~~~~~~~~--~~~ 245 (287)
T 2wei_A 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG--------KNEYDILKRVETGKYAFD--LPQ 245 (287)
T ss_dssp CSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC--------SSHHHHHHHHHHCCCCCC--SGG
T ss_pred CCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCCCCC--chh
Confidence 3 23357889999998765 489999999999999999999999862 122222222222111100 011
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~------~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 246 WR------TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp GT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hh------hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11 11236788999999999999999999987
No 222
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.7e-40 Score=335.22 Aligned_cols=243 Identities=21% Similarity=0.276 Sum_probs=188.3
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--------ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--------NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 327 (565)
..+.||+|+||.||+|... +++.||||.+.... ......+.+|+.++++++||||+++++++...+ .++|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence 4578999999999999964 67899999986422 112345889999999999999999999986554 8999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC---cEEeccCC
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE---PLLTDYAL 404 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DfGl 404 (565)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 93 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 93 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN----GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred EecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 99999999999986533 489999999999999999999998 9999999999999987654 99999999
Q ss_pred ccccccc---ccccccccccCCCcc---CCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc
Q 008431 405 VPIVNKE---HAQLHMVAYKSPEFN---QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE 478 (565)
Q Consensus 405 a~~~~~~---~~~~~t~~y~aPE~~---~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (565)
++..... ....+|+.|+|||++ ....++.++|||||||++|||++|+.||..... ...+...+. ..
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~----~~ 235 (322)
T 2ycf_A 164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQIT----SG 235 (322)
T ss_dssp CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC----SSCHHHHHH----HT
T ss_pred ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----HHHHHHHHH----hC
Confidence 9876543 234578999999985 356789999999999999999999999963221 112222221 11
Q ss_pred ccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 479 WTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 479 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. . ..+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~-~-~~~~~~~-----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KY-N-FIPEVWA-----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CC-C-CCHHHHT-----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc-c-cCchhhh-----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 10 0 0011100 11236788999999999999999999974
No 223
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.3e-40 Score=338.09 Aligned_cols=253 Identities=17% Similarity=0.217 Sum_probs=195.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccC-----------------HHHHHHHHHHHhcCCCCCccceEEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVG-----------------KEDFHEHMTRLGSLSHPNLLPLIAFYY 319 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l~~~~~ 319 (565)
..+.||+|+||.||+|.. +++.||+|.+....... .+.+.+|+.++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 457899999999999999 99999999997432111 178999999999999999999999999
Q ss_pred ecCceEEEEeccCCCCHHHH------HhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCccCCCCCCCEEEc
Q 008431 320 RKEEKLLVSDFVPNGSLANL------LHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK-EFPGVTLPHGHLKSSNVLLD 392 (565)
Q Consensus 320 ~~~~~~lv~E~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~-~~~~~~ivHrDlkp~NILl~ 392 (565)
+.+..++||||+++|+|.++ +.... ...+++..+..++.|++.||.|||+ . +|+||||||+||+++
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~----~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNEK----NICHRDVKPSNILMD 186 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHHTS----CEECCCCCGGGEEEC
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhccC----CEeecCCChHhEEEc
Confidence 99999999999999999988 44321 2359999999999999999999998 7 999999999999999
Q ss_pred CCCCcEEeccCCccccccc--ccccccccccCCCccCCC-CCCc-chhHHHHHHHHHHHHcCCCCccccccCCCCCcchH
Q 008431 393 NAYEPLLTDYALVPIVNKE--HAQLHMVAYKSPEFNQTD-GVTR-KTDVWSLGILILELLTGKFPANYLAQGKGANADLA 468 (565)
Q Consensus 393 ~~~~~kl~DfGla~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~ 468 (565)
.++.+||+|||++...... ....++..|+|||++.+. .++. ++|||||||++|||++|+.||.... ...
T Consensus 187 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~ 259 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI-------SLV 259 (348)
T ss_dssp TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS-------CSH
T ss_pred CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC-------cHH
Confidence 9999999999999765433 345688999999998877 6666 9999999999999999999997321 112
Q ss_pred HHHHHHhhhcccCc-----cccccccC--CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 469 TWVNSVVREEWTGE-----VFDKDMRG--TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 469 ~~~~~~~~~~~~~~-----~~d~~~~~--~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.............. ...+.... ..........+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 260 ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22222221110000 00000000 0000112346788999999999999999999976
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-39 Score=332.48 Aligned_cols=254 Identities=17% Similarity=0.255 Sum_probs=195.9
Q ss_pred ccceecccCceeEEEEEE--eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCC------ccceEEEEEecCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL--LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN------LLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~ 328 (565)
..+.||+|+||+||+|.. .+++.||||+++.. ....+.+.+|+.+++.++|+| ++++++++...+..++||
T Consensus 18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 96 (339)
T 1z57_A 18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVF 96 (339)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEE
Confidence 457899999999999986 36788999998643 233567889999998887654 999999999999999999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---------------
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN--------------- 393 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~--------------- 393 (565)
||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 97 e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~----~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 97 ELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSN----KLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred cCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 999 8899999986542 2488999999999999999999998 9999999999999987
Q ss_pred ----CCCcEEeccCCccccccc-ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchH
Q 008431 394 ----AYEPLLTDYALVPIVNKE-HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLA 468 (565)
Q Consensus 394 ----~~~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~ 468 (565)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~ 243 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS-----KEHL 243 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH-----HHHH
T ss_pred ccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh-----HHHH
Confidence 678999999999865543 345789999999999998999999999999999999999999963211 1111
Q ss_pred HHHHHHhhh--------cccCccc---------------------cccccCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 008431 469 TWVNSVVRE--------EWTGEVF---------------------DKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL 519 (565)
Q Consensus 469 ~~~~~~~~~--------~~~~~~~---------------------d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 519 (565)
..+...... ....... .+..............+.+++.+||+.||++|||+
T Consensus 244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 323 (339)
T 1z57_A 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL 323 (339)
T ss_dssp HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence 111111100 0000000 00000011123445678899999999999999999
Q ss_pred HHHHH
Q 008431 520 REAVE 524 (565)
Q Consensus 520 ~evl~ 524 (565)
.|+++
T Consensus 324 ~ell~ 328 (339)
T 1z57_A 324 REALK 328 (339)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99975
No 225
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.4e-40 Score=343.93 Aligned_cols=258 Identities=19% Similarity=0.248 Sum_probs=194.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC--------CCCccceEEEEE----ecCc
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS--------HPNLLPLIAFYY----RKEE 323 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~----~~~~ 323 (565)
..+.||+|+||+||+|+. .+++.||||++... ....+.+.+|+.+++.++ ||||+++++++. ....
T Consensus 41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~ 119 (397)
T 1wak_A 41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTH 119 (397)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEE
T ss_pred EEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCce
Confidence 457899999999999985 46788999998643 334567889999999885 788999999987 4557
Q ss_pred eEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCC--------
Q 008431 324 KLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAY-------- 395 (565)
Q Consensus 324 ~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~-------- 395 (565)
.++||||+ +|+|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 120 ~~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 120 ICMVFEVL-GHHLLKWIIKSNY---QGLPLPCVKKIIQQVLQGLDYLHTKC---RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp EEEEECCC-CCBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred EEEEEecc-CccHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHeeEeccchhhhhhhh
Confidence 89999999 5677777665432 24999999999999999999999853 799999999999998775
Q ss_pred -----------------------------------------CcEEeccCCccccccc-ccccccccccCCCccCCCCCCc
Q 008431 396 -----------------------------------------EPLLTDYALVPIVNKE-HAQLHMVAYKSPEFNQTDGVTR 433 (565)
Q Consensus 396 -----------------------------------------~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~ 433 (565)
.+||+|||+++..... ....+|+.|+|||++.+..++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 272 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNT 272 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCT
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCc
Confidence 8999999999876543 3457899999999999889999
Q ss_pred chhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhh---h---------cccCccccc--cc-----------
Q 008431 434 KTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVR---E---------EWTGEVFDK--DM----------- 488 (565)
Q Consensus 434 ~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d~--~~----------- 488 (565)
++|||||||++|||+||+.||........ ..-...+..... . ......+.. .+
T Consensus 273 ~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 273 PADIWSTACMAFELATGDYLFEPHSGEEY--TRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp HHHHHHHHHHHHHHHHSSCSCCCCCCSSS--CHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCCCccccc--CchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999974321110 001111111110 0 000000000 00
Q ss_pred -----cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 489 -----RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 489 -----~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
............+.+++.+||+.||++|||+.|+++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001123455678899999999999999999999975
No 226
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=329.54 Aligned_cols=250 Identities=18% Similarity=0.242 Sum_probs=185.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEE--------------ec
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYY--------------RK 321 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--------------~~ 321 (565)
..+.||+|+||.||+|... +++.||+|++........+++.+|+.++++++||||+++++++. ..
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~ 94 (320)
T 2i6l_A 15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL 94 (320)
T ss_dssp EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence 3578999999999999965 58899999997655555678999999999999999999999874 33
Q ss_pred CceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc-CCCCcEEe
Q 008431 322 EEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD-NAYEPLLT 400 (565)
Q Consensus 322 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~ 400 (565)
...++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+
T Consensus 95 ~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 95 NSVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSA----NVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp SEEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT----TCBCCCCSGGGEEEETTTTEEEEC
T ss_pred CceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhC----CEecCCCCHHHEEEcCCCCeEEEc
Confidence 56799999998 6999998642 388999999999999999999998 999999999999997 56799999
Q ss_pred ccCCccccccc-------ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHH
Q 008431 401 DYALVPIVNKE-------HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVN 472 (565)
Q Consensus 401 DfGla~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 472 (565)
|||+++..... ....++..|+|||.+.. ..++.++|||||||++|||+||+.||... .......
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--------~~~~~~~ 235 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA--------HELEQMQ 235 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC--------CHHHHHH
Confidence 99999875432 23345788999997654 67899999999999999999999999632 1111121
Q ss_pred HHhhhcc-------------cCccccccccCCCCC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 473 SVVREEW-------------TGEVFDKDMRGTKSG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 473 ~~~~~~~-------------~~~~~d~~~~~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
....... ..............+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 1111100 000000000000000 0112468889999999999999999999863
No 227
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.1e-39 Score=327.66 Aligned_cols=252 Identities=20% Similarity=0.285 Sum_probs=191.8
Q ss_pred ccceecccCceeEEEEEE--eCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcC---CCCCccceEEEEE-----ecCce
Q 008431 257 SAEVLGSGSFGSSYKAVL--LTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSL---SHPNLLPLIAFYY-----RKEEK 324 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~-----~~~~~ 324 (565)
..+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.+ +||||+++++++. .....
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 457899999999999997 467889999987432 22234567787777665 8999999999997 45678
Q ss_pred EEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCC
Q 008431 325 LLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYAL 404 (565)
Q Consensus 325 ~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGl 404 (565)
++||||++ |+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~----gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSH----RVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred EEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHC----CceeccCCHHHeEEcCCCCEEEecCcc
Confidence 99999998 699999986543 2489999999999999999999998 999999999999999999999999999
Q ss_pred ccccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhh----
Q 008431 405 VPIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVRE---- 477 (565)
Q Consensus 405 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 477 (565)
++..... ....+|..|+|||++.+..++.++|||||||++|||++|+.||... .....+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------~~~~~~~~i~~~~~~~ 238 (326)
T 1blx_A 167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS--------SDVDQLGKILDVIGLP 238 (326)
T ss_dssp CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCC
T ss_pred cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHHHcCCC
Confidence 9876533 3456789999999998889999999999999999999999999631 111222222110
Q ss_pred ---cccCcccccc--ccC------CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 478 ---EWTGEVFDKD--MRG------TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 478 ---~~~~~~~d~~--~~~------~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.+......+. ... ..........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1110000000 000 0000112246778999999999999999999975
No 228
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.6e-39 Score=335.38 Aligned_cols=253 Identities=17% Similarity=0.275 Sum_probs=191.4
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEec-----CceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK-----EEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~E 329 (565)
..+.||+|+||.||+|... ++..||||++.... ....+.+.+|+.++++++||||+++++++... ...|+|||
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e 110 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD 110 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEc
Confidence 4578999999999999954 67889999997433 23346789999999999999999999999765 36899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+. |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 111 ~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 111 LME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSA----NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 997 5999999753 389999999999999999999998 99999999999999999999999999997664
Q ss_pred cc-------ccccccccccCCCccC-CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccC
Q 008431 410 KE-------HAQLHMVAYKSPEFNQ-TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTG 481 (565)
Q Consensus 410 ~~-------~~~~~t~~y~aPE~~~-~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (565)
.. ....+|+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+..........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY-----LDQLNHILGILGSPSQE 254 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG-----GGHHHHHHHHHCSCCHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHHHhCCCCHH
Confidence 33 2336789999999754 45589999999999999999999999963211 11111111111100000
Q ss_pred ---cccc-------cccc-CCCCC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 482 ---EVFD-------KDMR-GTKSG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 482 ---~~~d-------~~~~-~~~~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
...+ ..+. ....+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 0000 00000 0112467889999999999999999999863
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.9e-40 Score=337.83 Aligned_cols=249 Identities=19% Similarity=0.283 Sum_probs=188.8
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCce------EEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEK------LLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~lv 327 (565)
..+.||+|+||+||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+.. ++|
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 4578999999999999954 68899999997532 22346789999999999999999999999876654 999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
|||+. |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC----CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99997 688887632 389999999999999999999998 999999999999999999999999999987
Q ss_pred cccc-ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcc-c----
Q 008431 408 VNKE-HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEW-T---- 480 (565)
Q Consensus 408 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 480 (565)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||... ...+.+........ .
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~~~~~~ 265 (371)
T 4exu_A 194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--------DYLDQLTQILKVTGVPGTEF 265 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS--------SHHHHHHHHHHHHCCCCHHH
T ss_pred cccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHHHhCCCcHHH
Confidence 6544 34567999999998876 67899999999999999999999999631 12222222211000 0
Q ss_pred -Ccccc-------ccccCCC-C-----CHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 481 -GEVFD-------KDMRGTK-S-----GEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 481 -~~~~d-------~~~~~~~-~-----~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
..+.+ ..+.... . .......+.+++.+||+.||++|||+.|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000 0000000 0 00112468889999999999999999999764
No 230
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-39 Score=335.88 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=179.5
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEecCc-------eEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEE-------KLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-------~~lv~ 328 (565)
..+.||+|+||+||+|.. .++..||||++... ......+.+|++.++.++||||+++++++...+. .++||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~ 105 (360)
T 3e3p_A 27 VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVM 105 (360)
T ss_dssp EC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEe
Confidence 457899999999999996 46899999998653 2334567888999999999999999999976543 78999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hhCCCCCCccCCCCCCCEEEcC-CCCcEEeccCCc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY--KEFPGVTLPHGHLKSSNVLLDN-AYEPLLTDYALV 405 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH--~~~~~~~ivHrDlkp~NILl~~-~~~~kl~DfGla 405 (565)
||+++ +|.+.+...... ...+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||++
T Consensus 106 e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~----~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a 179 (360)
T 3e3p_A 106 EYVPD-TLHRCCRNYYRR-QVAPPPILIKVFLFQLIRSIGCLHLPSV----NVCHRDIKPHNVLVNEADGTLKLCDFGSA 179 (360)
T ss_dssp ECCSC-BHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHTSTTT----CCBCSCCCGGGEEEETTTTEEEECCCTTC
T ss_pred ecccc-cHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhCCCC----CeecCcCCHHHEEEeCCCCcEEEeeCCCc
Confidence 99986 555554432111 224889999999999999999999 66 9999999999999996 899999999999
Q ss_pred cccccc---ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc-cc
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE-WT 480 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 480 (565)
+..... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||... .....+....+.. ..
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--------~~~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD--------NSAGQLHEIVRVLGCP 251 (360)
T ss_dssp BCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHHHHCCC
T ss_pred eecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCC--------ChHHHHHHHHHHcCCC
Confidence 876543 244678999999987654 4899999999999999999999999632 1111111111100 00
Q ss_pred ---------Ccccccccc---C-------CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 481 ---------GEVFDKDMR---G-------TKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 481 ---------~~~~d~~~~---~-------~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
....+.... . ..........+.+++.+||+.||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000000 0 00011234578899999999999999999999864
No 231
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.8e-39 Score=331.32 Aligned_cols=245 Identities=16% Similarity=0.224 Sum_probs=167.8
Q ss_pred cceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEe----cCceEEEEeccC
Q 008431 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR----KEEKLLVSDFVP 332 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~E~~~ 332 (565)
.++||+|+||+||+|... +++.||||++... .....+....++.++||||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 467999999999999965 7899999998642 2222223344667899999999999976 345899999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCCccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYALVPIVN 409 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGla~~~~ 409 (565)
+|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 110 gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~----~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 110 GGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSH----NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp TEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHT----TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC----CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 9999999986532 2499999999999999999999998 9999999999999976 4559999999997654
Q ss_pred cc--ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCcccccc
Q 008431 410 KE--HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKD 487 (565)
Q Consensus 410 ~~--~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 487 (565)
.. ....+|+.|+|||++....++.++|||||||++|||++|+.||...... .............. .....+.
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~ 256 (336)
T 3fhr_A 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----AISPGMKRRIRLGQ-YGFPNPE 256 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------CCCTTT
T ss_pred ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccch-----hhhhhHHHhhhccc-cccCchh
Confidence 33 3456789999999998888999999999999999999999999632211 01000011110000 0000010
Q ss_pred ccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 488 MRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 488 ~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ......+.+++.+||+.||++|||+.|+++.
T Consensus 257 ~------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 W------SEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp S------TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred h------ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 1122467889999999999999999999983
No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.2e-39 Score=336.60 Aligned_cols=192 Identities=20% Similarity=0.274 Sum_probs=163.8
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CC-----CccceEEEEEecCceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HP-----NLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~lv~E 329 (565)
..+.||+|+||+||+|... +++.||||+++.. .....++.+|+.+++.++ |+ +|+++++++...+..++|||
T Consensus 58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 136 (382)
T 2vx3_A 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE 136 (382)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEE
T ss_pred EEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEe
Confidence 4578999999999999964 6788999998743 233456778888888875 44 49999999999999999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc--CCCCcEEeccCCccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD--NAYEPLLTDYALVPI 407 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~--~~~~~kl~DfGla~~ 407 (565)
|++ |+|.+++..... ..+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++.+||+|||+++.
T Consensus 137 ~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~--~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 137 MLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP--ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp CCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST--TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred cCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC--CCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 996 599999986542 2489999999999999999999952 12899999999999994 578899999999987
Q ss_pred cccc-ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 408 VNKE-HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 408 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
.... ....+|+.|+|||++.+..++.++|||||||++|||+||++||.
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 6543 45578999999999999999999999999999999999999997
No 233
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.2e-39 Score=322.03 Aligned_cols=241 Identities=20% Similarity=0.326 Sum_probs=185.6
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEEEe-------------cC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR-------------KE 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------------~~ 322 (565)
..+.||+|+||.||+|+. .+++.||||.+... ....+.+.+|+.++++++||||+++++++.+ .+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (303)
T 1zy4_A 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88 (303)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEE
T ss_pred hhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCC
Confidence 457899999999999996 47899999998643 2345678999999999999999999999865 34
Q ss_pred ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEecc
Q 008431 323 EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDY 402 (565)
Q Consensus 323 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~Df 402 (565)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~----~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 89 TLFIQMEYCENGTLYDLIHSENL----NQQRDEYWRLFRQILEALSYIHSQ----GIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp EEEEEEECCCSCBHHHHHHHSCG----GGCHHHHHHHHHHHHHHHHHHHHT----TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEecCCCCCHHHhhhcccc----ccchHHHHHHHHHHHHHHHHHHhC----CeecccCCHHhEEEcCCCCEEEeeC
Confidence 67999999999999999986432 378899999999999999999998 9999999999999999999999999
Q ss_pred CCccccccc------------------ccccccccccCCCccCCC-CCCcchhHHHHHHHHHHHHcCCCCccccccCCCC
Q 008431 403 ALVPIVNKE------------------HAQLHMVAYKSPEFNQTD-GVTRKTDVWSLGILILELLTGKFPANYLAQGKGA 463 (565)
Q Consensus 403 Gla~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~ 463 (565)
|+++..... ....+++.|+|||++.+. .++.++|||||||++|||++ ||...
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~------ 231 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG------ 231 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH------
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc------
Confidence 998765321 233578899999988754 68999999999999999998 44311
Q ss_pred CcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 464 NADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
............. ...+.+.+ .......+.+++.+||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 -MERVNILKKLRSV---SIEFPPDF-----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -HHHHHHHHHHHST---TCCCCTTC-----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -hhHHHHHHhcccc---ccccCccc-----cccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111122111111 00111111 1122346788999999999999999999976
No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.3e-39 Score=330.95 Aligned_cols=251 Identities=20% Similarity=0.286 Sum_probs=173.9
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHH-HHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMT-RLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|... +|+.||||++.... .....++.+|+. +++.++||||+++++++...+..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 4578999999999999964 78899999997532 233445666666 77888999999999999999999999999985
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc--
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE-- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~-- 411 (565)
+|.+++..........+++..+..++.|++.||.|||+.. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 181 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL---KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH---SCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC---CEeECCCCHHHEEEcCCCCEEEccCCCceecccccc
Confidence 8888876422111234899999999999999999999852 7999999999999999999999999999776433
Q ss_pred -ccccccccccCCCcc----CCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccc
Q 008431 412 -HAQLHMVAYKSPEFN----QTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDK 486 (565)
Q Consensus 412 -~~~~~t~~y~aPE~~----~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 486 (565)
....+|+.|+|||++ ....++.++|||||||++|||++|+.||...... ...+. . ......+
T Consensus 182 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~----~--~~~~~~~ 248 (327)
T 3aln_A 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLT----Q--VVKGDPP 248 (327)
T ss_dssp ------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------C----C--CCCSCCC
T ss_pred cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHH----H--HhcCCCC
Confidence 233688999999988 4567899999999999999999999999632110 00000 0 0000011
Q ss_pred cccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 487 DMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 487 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.+... ........+.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 249 QLSNS-EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCC-SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCc-ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 11110 001122468889999999999999999999763
No 235
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.5e-39 Score=325.67 Aligned_cols=242 Identities=17% Similarity=0.287 Sum_probs=189.6
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCC--CCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLS--HPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++ ||||+++++++...+..++||| +.
T Consensus 32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 110 (313)
T 3cek_A 32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 110 (313)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cC
Confidence 457899999999999998889999999997432 234567899999999997 5999999999999999999999 56
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++ +.+||+|||+++.....
T Consensus 111 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~----~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 111 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQH----GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp SEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 789999998644 389999999999999999999998 9999999999999965 88999999999876433
Q ss_pred -----ccccccccccCCCccCC-----------CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHh
Q 008431 412 -----HAQLHMVAYKSPEFNQT-----------DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVV 475 (565)
Q Consensus 412 -----~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 475 (565)
....+++.|+|||++.. ..++.++|||||||++|||++|+.||... ......+....
T Consensus 181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~~~~~~~~~~ 253 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-------INQISKLHAII 253 (313)
T ss_dssp ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHH
T ss_pred ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH-------HHHHHHHHHHH
Confidence 23457899999998765 46889999999999999999999999631 11122222222
Q ss_pred hhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 008431 476 REEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKI 526 (565)
Q Consensus 476 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L 526 (565)
..... ..... .....+.+++.+||+.||++|||+.|+++.-
T Consensus 254 ~~~~~-----~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 254 DPNHE-----IEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CTTSC-----CCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hcccc-----cCCcc-----cchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 11110 00101 1123678888999999999999999998753
No 236
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-39 Score=343.28 Aligned_cols=244 Identities=17% Similarity=0.233 Sum_probs=183.4
Q ss_pred cceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +|||||++++++.+.+..|+||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4689999999998877778999999998643 245678999999876 89999999999999999999999996 699
Q ss_pred HHHHhhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCC-------------CCcEEec
Q 008431 337 ANLLHVRRAPGQP--GLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNA-------------YEPLLTD 401 (565)
Q Consensus 337 ~~~l~~~~~~~~~--~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~-------------~~~kl~D 401 (565)
.+++......... ..++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL----KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC----CccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 9999865432110 113335678999999999999998 99999999999999754 4899999
Q ss_pred cCCcccccccc--------cccccccccCCCccCC-------CCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCc
Q 008431 402 YALVPIVNKEH--------AQLHMVAYKSPEFNQT-------DGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANA 465 (565)
Q Consensus 402 fGla~~~~~~~--------~~~~t~~y~aPE~~~~-------~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~ 465 (565)
||+++...... ...||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.... .
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~ 245 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY------S 245 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT------T
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch------h
Confidence 99998765431 2468899999998865 678999999999999999999 999986211 0
Q ss_pred chHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 466 DLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.. ......... .+.. ...........+.+++.+||+.||++|||+.||++
T Consensus 246 ~~----~~i~~~~~~----~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RE----SNIIRGIFS----LDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH----HHHHHTCCC----CCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hH----HHHhcCCCC----cccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 111111100 0011 11112345567889999999999999999999975
No 237
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2e-39 Score=332.98 Aligned_cols=252 Identities=16% Similarity=0.223 Sum_probs=189.6
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEec-----CceEEEEe
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRK-----EEKLLVSD 329 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~E 329 (565)
..+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++... ...++|||
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e 94 (353)
T 2b9h_A 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE 94 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEe
Confidence 3578999999999999964 68899999996432 23345788999999999999999999998754 57899999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+. |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 95 ~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~----~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 95 LMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGS----NVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT----TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC----CeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 997 6999998752 389999999999999999999998 99999999999999999999999999997654
Q ss_pred cc--------------ccccccccccCCCccC-CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHH
Q 008431 410 KE--------------HAQLHMVAYKSPEFNQ-TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSV 474 (565)
Q Consensus 410 ~~--------------~~~~~t~~y~aPE~~~-~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 474 (565)
.. ....||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~ 238 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-----RHQLLLIFGI 238 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHHH
Confidence 22 1235788999999764 47789999999999999999999999963210 0001111111
Q ss_pred hhhcccC----ccccc-------cccCCC-CC-----HHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 475 VREEWTG----EVFDK-------DMRGTK-SG-----EGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 475 ~~~~~~~----~~~d~-------~~~~~~-~~-----~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
....... .+..+ .+.... .. ......+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1000000 00000 000000 00 012246788999999999999999999987
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=331.99 Aligned_cols=247 Identities=19% Similarity=0.287 Sum_probs=188.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCc------eEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEE------KLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lv 327 (565)
..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+. .++|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 107 (353)
T 3coi_A 28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107 (353)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence 457899999999999996 468899999986532 2234678999999999999999999999987654 4999
Q ss_pred EeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 328 SDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 328 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
|||+. |+|.+++.. .+++..+..++.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~----~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 108 MPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSA----GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHT----TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred ecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99997 688877632 389999999999999999999998 999999999999999999999999999987
Q ss_pred cccc-ccccccccccCCCccCC-CCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhc------c
Q 008431 408 VNKE-HAQLHMVAYKSPEFNQT-DGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREE------W 479 (565)
Q Consensus 408 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~ 479 (565)
.... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||... +....+....... +
T Consensus 176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~--------~~~~~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--------DYLDQLTQILKVTGVPGTEF 247 (353)
T ss_dssp --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS--------CHHHHHHHHHHHHCBCCHHH
T ss_pred CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHHHhCCCCHHH
Confidence 6543 34467899999998776 67899999999999999999999999731 1112221111100 0
Q ss_pred cCcc---------------ccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 480 TGEV---------------FDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 480 ~~~~---------------~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
...+ ..+.+.. ........+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQ--LFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTT--TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHH--hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 0000000 011223478889999999999999999999763
No 239
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=339.02 Aligned_cols=239 Identities=15% Similarity=0.213 Sum_probs=181.8
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEEEEeccCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
..++||+|+||+||.....+++.||||++.... ...+.+|+++++++ +|||||++++++.+.+..|+||||+. |+
T Consensus 28 ~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred cCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence 457899999999776656789999999986432 22356899999999 79999999999999999999999996 69
Q ss_pred HHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc-----CCCCcEEeccCCcccccc
Q 008431 336 LANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD-----NAYEPLLTDYALVPIVNK 410 (565)
Q Consensus 336 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-----~~~~~kl~DfGla~~~~~ 410 (565)
|.+++...... +.+..+..++.||+.||.|||+. +|+||||||+|||++ ....+||+|||+++....
T Consensus 104 L~~~l~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~----~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 104 LQEYVEQKDFA----HLGLEPITLLQQTTSGLAHLHSL----NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp HHHHHHSSSCC----CCSSCHHHHHHHHHHHHHHHHHT----TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred HHHHHHhcCCC----ccchhHHHHHHHHHHHHHHHHHC----cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 99999865432 44556778999999999999998 999999999999994 334678999999987643
Q ss_pred c-------ccccccccccCCCccC---CCCCCcchhHHHHHHHHHHHHc-CCCCccccccCCCCCcchHHHHHHHhhhcc
Q 008431 411 E-------HAQLHMVAYKSPEFNQ---TDGVTRKTDVWSLGILILELLT-GKFPANYLAQGKGANADLATWVNSVVREEW 479 (565)
Q Consensus 411 ~-------~~~~~t~~y~aPE~~~---~~~~~~~~DvwS~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (565)
. ....||+.|+|||++. ...++.++|||||||++|||+| |+.||... ........... .
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~---------~~~~~~~~~~~-~ 245 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS---------LQRQANILLGA-C 245 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST---------TTHHHHHHTTC-C
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh---------hHHHHHHHhcc-C
Confidence 2 2346899999999887 4567889999999999999999 99998521 11111111111 0
Q ss_pred cCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 480 TGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 480 ~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
.... ..........+.+++.+||+.||++|||+.||++
T Consensus 246 ~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 SLDC-------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCTT-------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Cccc-------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1111 0111233445778999999999999999999984
No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=6.8e-39 Score=328.78 Aligned_cols=254 Identities=16% Similarity=0.229 Sum_probs=193.4
Q ss_pred ccceecccCceeEEEEEEe-CC-CeeEEEEeeccCccCHHHHHHHHHHHhcCCCCC------ccceEEEEEecCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TG-PAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN------LLPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~ 328 (565)
..+.||+|+||+||+|... ++ ..||+|.++.. ....+.+.+|+.++++++|++ ++.+++++...+..++||
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~ 101 (355)
T 2eu9_A 23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAF 101 (355)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred EEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEE
Confidence 4578999999999999964 44 58999998643 234567889999999987766 899999999999999999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEE-----------------
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLL----------------- 391 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl----------------- 391 (565)
||+ +|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||+
T Consensus 102 e~~-~~~l~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~----~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 102 ELL-GKNTFEFLKENNF---QPYPLPHVRHMAYQLCHALRFLHEN----QLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHTT----TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred ecc-CCChHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC----CcccCCCCHHHEEEecccccccccccccccc
Confidence 999 6678887765432 2489999999999999999999998 99999999999999
Q ss_pred --cCCCCcEEeccCCccccccc-ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchH
Q 008431 392 --DNAYEPLLTDYALVPIVNKE-HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLA 468 (565)
Q Consensus 392 --~~~~~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~ 468 (565)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~ 248 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN-----REHL 248 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHH
T ss_pred cccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHH
Confidence 67889999999999865443 345789999999999999999999999999999999999999963211 1111
Q ss_pred HHHHHHhhh--------cccCccc-c--------------------ccccCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 008431 469 TWVNSVVRE--------EWTGEVF-D--------------------KDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDL 519 (565)
Q Consensus 469 ~~~~~~~~~--------~~~~~~~-d--------------------~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~ 519 (565)
..+...... ....... . +..............+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 328 (355)
T 2eu9_A 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL 328 (355)
T ss_dssp HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence 111111100 0000000 0 0000001122345578899999999999999999
Q ss_pred HHHHH
Q 008431 520 REAVE 524 (565)
Q Consensus 520 ~evl~ 524 (565)
.|+++
T Consensus 329 ~e~l~ 333 (355)
T 2eu9_A 329 AEALL 333 (355)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99864
No 241
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=321.21 Aligned_cols=244 Identities=23% Similarity=0.308 Sum_probs=175.1
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCcc-C-HHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccCC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNV-G-KEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
..+.||+|+||.||+|... +|+.||||++...... . .+.+.++..+++.++||||+++++++...+..++||||+ +
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 107 (318)
T 2dyl_A 29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-G 107 (318)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-C
Confidence 4578999999999999964 7899999999754321 2 233445556788899999999999999999999999999 5
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-hCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccc-
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYK-EFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKE- 411 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~-~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~- 411 (565)
+.+..+...... .+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~l~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~----~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 108 TCAEKLKKRMQG----PIPERILGKMTVAIVKALYYLKEKH----GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHHH----CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred CcHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhhC----CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 566666554332 38999999999999999999998 5 8999999999999999999999999998765433
Q ss_pred --ccccccccccCCCccC-----CCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccc
Q 008431 412 --HAQLHMVAYKSPEFNQ-----TDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVF 484 (565)
Q Consensus 412 --~~~~~t~~y~aPE~~~-----~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (565)
....+++.|+|||++. ...++.++|||||||++|||++|+.||... ......+.........
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~~~~~~~~~~~~~~---- 248 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC-------KTDFEVLTKVLQEEPP---- 248 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC-------CSHHHHHHHHHHSCCC----
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC-------CccHHHHHHHhccCCC----
Confidence 2346789999999874 556889999999999999999999999631 1122222222222111
Q ss_pred cccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 485 DKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 485 d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.+.... .....+.+++.+||+.||++|||+.|+++.
T Consensus 249 --~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 --LLPGHM---GFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --CCCSSS---CCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --CCCccC---CCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111000 112367888899999999999999999863
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.9e-39 Score=334.28 Aligned_cols=259 Identities=19% Similarity=0.248 Sum_probs=194.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-----------CCCccceEEEEEecC--
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-----------HPNLLPLIAFYYRKE-- 322 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~~~-- 322 (565)
..+.||+|+||+||+|.. .+++.||||.+... ....+.+.+|+.++++++ ||||+++++++...+
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 101 (373)
T 1q8y_A 23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN 101 (373)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETT
T ss_pred EEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCC
Confidence 457899999999999995 57889999998642 234567889999998886 899999999998654
Q ss_pred --ceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc------CC
Q 008431 323 --EKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD------NA 394 (565)
Q Consensus 323 --~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~------~~ 394 (565)
..++||||+ +++|.+++...... .+++..+..++.||+.||+|||+++ +|+||||||+|||++ ..
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 102 GVHVVMVFEVL-GENLLALIKKYEHR---GIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EEEEEEEECCC-CEEHHHHHHHTTTS---CCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTE
T ss_pred CceEEEEEecC-CCCHHHHHHHhhcc---CCcHHHHHHHHHHHHHHHHHHHhcC---CEEecCCChHHeEEeccCCCcCc
Confidence 689999999 89999999865432 3899999999999999999999853 799999999999994 44
Q ss_pred CCcEEeccCCccccccc-ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHH
Q 008431 395 YEPLLTDYALVPIVNKE-HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNS 473 (565)
Q Consensus 395 ~~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 473 (565)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+||+.||........ ......+..
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 252 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY--TKDDDHIAQ 252 (373)
T ss_dssp EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-----------CHHHHHHH
T ss_pred ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc--CChHHHHHH
Confidence 57999999999876543 345789999999999988999999999999999999999999974321100 001111111
Q ss_pred Hhhh-ccc-----------Cccccc-----cc-------------cCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 008431 474 VVRE-EWT-----------GEVFDK-----DM-------------RGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAV 523 (565)
Q Consensus 474 ~~~~-~~~-----------~~~~d~-----~~-------------~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl 523 (565)
.... +.. ...++. .+ .....+......+.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 332 (373)
T 1q8y_A 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV 332 (373)
T ss_dssp HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred HHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHh
Confidence 1100 000 000000 00 01112345667889999999999999999999998
Q ss_pred HH
Q 008431 524 EK 525 (565)
Q Consensus 524 ~~ 525 (565)
+.
T Consensus 333 ~h 334 (373)
T 1q8y_A 333 NH 334 (373)
T ss_dssp TC
T ss_pred hC
Confidence 73
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2e-39 Score=328.68 Aligned_cols=233 Identities=19% Similarity=0.295 Sum_probs=190.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCcc------CHHHHHHHHHHHhcCC--CCCccceEEEEEecCceEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNV------GKEDFHEHMTRLGSLS--HPNLLPLIAFYYRKEEKLLV 327 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv 327 (565)
..+.||+|+||.||+|.. .+++.||||.+...... ..+.+.+|+.++++++ ||||+++++++...+..++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv 126 (320)
T 3a99_A 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 126 (320)
T ss_dssp EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEE
Confidence 457899999999999985 57889999999753221 2345778999999996 59999999999999999999
Q ss_pred EeccCC-CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc-CCCCcEEeccCCc
Q 008431 328 SDFVPN-GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD-NAYEPLLTDYALV 405 (565)
Q Consensus 328 ~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DfGla 405 (565)
|||+.+ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ +++.+||+|||++
T Consensus 127 ~e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~----~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 127 LERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNC----GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp EECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC----CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999986 89999998654 389999999999999999999998 999999999999999 7899999999999
Q ss_pred cccccc--ccccccccccCCCccCCCCC-CcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCc
Q 008431 406 PIVNKE--HAQLHMVAYKSPEFNQTDGV-TRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGE 482 (565)
Q Consensus 406 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (565)
+..... ....+|+.|+|||++....+ +.++|||||||++|||+||+.||.... . ..... .
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~----~~~~~---~ 260 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------E----IIRGQ---V 260 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----HHHCC---C
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----------h----hhccc---c
Confidence 776543 34468899999998876665 688999999999999999999986211 0 01110 0
Q ss_pred cccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 483 VFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 483 ~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
...+ .....+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 FFRQ---------RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCSS---------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccc---------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011 11236788899999999999999999976
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=325.14 Aligned_cols=234 Identities=18% Similarity=0.250 Sum_probs=185.1
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeeccCc------cCHHHHHHHHHHHhcC----CCCCccceEEEEEecCceE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN------VGKEDFHEHMTRLGSL----SHPNLLPLIAFYYRKEEKL 325 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~H~niv~l~~~~~~~~~~~ 325 (565)
..+.||+|+||.||+|.. .+++.||||.+..... .....+.+|+.++.++ +||||+++++++...+..+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~ 114 (312)
T 2iwi_A 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFM 114 (312)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CE
T ss_pred EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEE
Confidence 457899999999999985 5788999999864322 1223466789998888 8999999999999999999
Q ss_pred EEEec-cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEc-CCCCcEEeccC
Q 008431 326 LVSDF-VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLD-NAYEPLLTDYA 403 (565)
Q Consensus 326 lv~E~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~-~~~~~kl~DfG 403 (565)
+|||| +.+++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 115 ~v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 115 LVLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSR----GVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp EEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHH----TEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred EEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC----CeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 99999 78999999998654 389999999999999999999999 999999999999999 88999999999
Q ss_pred Cccccccc--ccccccccccCCCccCCCCCC-cchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc
Q 008431 404 LVPIVNKE--HAQLHMVAYKSPEFNQTDGVT-RKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT 480 (565)
Q Consensus 404 la~~~~~~--~~~~~t~~y~aPE~~~~~~~~-~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (565)
+++..... ....++..|+|||++....+. .++|||||||++|||++|+.||.... . ..... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~----~~~~~-~ 250 (312)
T 2iwi_A 186 SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------E----ILEAE-L 250 (312)
T ss_dssp SCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H----HHHTC-C
T ss_pred hhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------H----Hhhhc-c
Confidence 98776543 344678999999987766654 58999999999999999999986211 0 00110 0
Q ss_pred CccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 481 GEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 481 ~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
.+ .......+.+++.+||+.||++|||+.|+++.
T Consensus 251 ------~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 ------HF-----PAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ------CC-----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ------CC-----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 01112367888999999999999999999863
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.3e-39 Score=348.68 Aligned_cols=263 Identities=20% Similarity=0.270 Sum_probs=199.3
Q ss_pred ccceecccCceeEEEEEE-eCCCeeEEEEeecc-CccCHHHHHHHHHHHhcCCCCCccceEEEEEe------cCceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQM-SNVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR------KEEKLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~~lv~ 328 (565)
..+.||+|+||+||+|.. .+|..||||.+... .....+.+.+|+.++++++||||+++++++.. .+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 457899999999999995 57899999998753 33445679999999999999999999998755 56789999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCC---cEEeccCCc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYE---PLLTDYALV 405 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~---~kl~DfGla 405 (565)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 98 Ey~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~----gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a 171 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHEN----RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171 (676)
T ss_dssp ECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHT----TBCCCCCCSTTEEEECCSSSCEEEECSCCCC
T ss_pred EeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC----CCccCCCCHHHeEeecCCCceeEEEcccccc
Confidence 99999999999986442 22488999999999999999999998 9999999999999997665 899999999
Q ss_pred cccccc---ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhccc--
Q 008431 406 PIVNKE---HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWT-- 480 (565)
Q Consensus 406 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 480 (565)
+..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||... .....|..........
T Consensus 172 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~-------~~~~~~~~~i~~~~~~~~ 244 (676)
T 3qa8_A 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN-------WQPVQWHGKVREKSNEHI 244 (676)
T ss_dssp CBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS-------CHHHHSSTTCC------C
T ss_pred cccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc-------cchhhhhhhhhcccchhh
Confidence 876543 2346789999999999999999999999999999999999999631 1111221111110000
Q ss_pred --Ccccc------cccc-CCCCCHHHHHHHHHHHhhccccCcCCCCCHHH-----HHHHHHHhhcc
Q 008431 481 --GEVFD------KDMR-GTKSGEGEMLKLLKIGMCCCEWNAERRWDLRE-----AVEKIMELKER 532 (565)
Q Consensus 481 --~~~~d------~~~~-~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~e-----vl~~L~~i~~~ 532 (565)
..... ..+. ...........+.+++.+||++||++|||+.| ..+.+..+...
T Consensus 245 ~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 00000 0000 01112345567889999999999999999988 55666666554
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-38 Score=352.51 Aligned_cols=235 Identities=17% Similarity=0.183 Sum_probs=189.9
Q ss_pred ccceecccCceeEEEEEEe--CCCeeEEEEeeccC-ccCHHHHHHHHHHHhcCCCCCccceEEEEEecCc-----eEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLL--TGPAMVVKRFRQMS-NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEE-----KLLVS 328 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~lv~ 328 (565)
..+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.++++++|||||++++++...+. .|+||
T Consensus 84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~ 163 (681)
T 2pzi_A 84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVM 163 (681)
T ss_dssp EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEE
Confidence 4578999999999999975 58899999986432 2334678999999999999999999999988765 69999
Q ss_pred eccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 329 DFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 329 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
||+++++|.+++.. .++|..++.++.||+.||.|||+. +|+||||||+|||++.+ .+||+|||+++..
T Consensus 164 E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~----giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 164 EYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSI----GLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp ECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC----CCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 99999999987743 399999999999999999999998 99999999999999886 8999999999887
Q ss_pred cccccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 409 NKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 409 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
.......||+.|+|||++.+. ++.++|||||||++|||++|.+||...... .+
T Consensus 232 ~~~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------------------~~----- 284 (681)
T 2pzi_A 232 NSFGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD---------------------GL----- 284 (681)
T ss_dssp TCCSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS---------------------SC-----
T ss_pred ccCCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc---------------------cc-----
Confidence 766677899999999987654 489999999999999999999887621110 00
Q ss_pred cCCCCCHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHhh
Q 008431 489 RGTKSGEGEMLKLLKIGMCCCEWNAERRW-DLREAVEKIMELK 530 (565)
Q Consensus 489 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP-s~~evl~~L~~i~ 530 (565)
............+.+++.+||+.||++|| +++++...|..+.
T Consensus 285 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 285 PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00000011224678899999999999999 5677777776653
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.9e-38 Score=310.91 Aligned_cols=229 Identities=10% Similarity=0.095 Sum_probs=177.6
Q ss_pred ccceecccCceeEEEEEEe-CCCeeEEEEeeccCcc---CHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEeccC
Q 008431 257 SAEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSNV---GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSDFVP 332 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E~~~ 332 (565)
..+.||+|+||.||+|... +++.||||.+...... ..+.|.+|+..+++++||||+++++++.+.+..|+||||++
T Consensus 35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 114 (286)
T 3uqc_A 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIR 114 (286)
T ss_dssp EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecC
Confidence 3478999999999999965 5889999999754322 23679999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcccccccc
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEH 412 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~ 412 (565)
+++|.+++... .....+..++.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 115 g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~----givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 115 GGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRA----GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHT----TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred CCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHC----CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 99999998531 34557888999999999999998 99999999999999999999998554
Q ss_pred cccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCC
Q 008431 413 AQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTK 492 (565)
Q Consensus 413 ~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 492 (565)
|++| ++.++|||||||++|||+||+.||.......... ... .........+....
T Consensus 175 -------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~-- 229 (286)
T 3uqc_A 175 -------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAE--------RDTAGQPIEPADID-- 229 (286)
T ss_dssp -------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECC--------BCTTSCBCCHHHHC--
T ss_pred -------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHH--------HHhccCCCChhhcc--
Confidence 4443 7899999999999999999999997432211000 000 00000000000000
Q ss_pred CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHhhccC
Q 008431 493 SGEGEMLKLLKIGMCCCEWNAERRWDLREAVEKIMELKERD 533 (565)
Q Consensus 493 ~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~L~~i~~~~ 533 (565)
......+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 230 --~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 230 --RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp --TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred --cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0112367889999999999999 9999999999998654
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.5e-37 Score=307.58 Aligned_cols=224 Identities=16% Similarity=0.202 Sum_probs=174.1
Q ss_pred cceecccCceeEEEEEE-eCCCeeEEEEeeccCccCHHHHHHHHHHH-hcCCCCCccceEEEEEe----cCceEEEEecc
Q 008431 258 AEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSNVGKEDFHEHMTRL-GSLSHPNLLPLIAFYYR----KEEKLLVSDFV 331 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~lv~E~~ 331 (565)
.++||+|+||.||+|.. .+++.||+|.+.. ...+.+|+.++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 36799999999999996 5788999999863 34677888887 66799999999999987 66789999999
Q ss_pred CCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC---CCCcEEeccCCcccc
Q 008431 332 PNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN---AYEPLLTDYALVPIV 408 (565)
Q Consensus 332 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~---~~~~kl~DfGla~~~ 408 (565)
++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 98 ~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~----~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 98 DGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSI----NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp CSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT----TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred CCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 99999999987542 2499999999999999999999998 9999999999999998 789999999998653
Q ss_pred cccccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccc
Q 008431 409 NKEHAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDM 488 (565)
Q Consensus 409 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 488 (565)
. +..++.++|||||||++|||+||+.||........ .......+.....
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------------~~~~~~~~~~~~~ 219 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------------SPGMKTRIRMGQY 219 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCCSSCTTCC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------------hHHHHHHHhhccc
Confidence 2 24578899999999999999999999963211100 0000000000000
Q ss_pred cCCCC--CHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 008431 489 RGTKS--GEGEMLKLLKIGMCCCEWNAERRWDLREAVEK 525 (565)
Q Consensus 489 ~~~~~--~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~~ 525 (565)
. ... .......+.+++.+||+.||++|||+.|+++.
T Consensus 220 ~-~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 220 E-FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp S-SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred c-CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 000 00112468889999999999999999999874
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-37 Score=322.26 Aligned_cols=237 Identities=19% Similarity=0.151 Sum_probs=174.5
Q ss_pred cceecccCceeEEEEEE-eCCCeeEEEEeeccCc---cCHHHHHHHHHHHhcCCC-CCccce------------------
Q 008431 258 AEVLGSGSFGSSYKAVL-LTGPAMVVKRFRQMSN---VGKEDFHEHMTRLGSLSH-PNLLPL------------------ 314 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H-~niv~l------------------ 314 (565)
.++||+|+||+||+|.. .+|+.||||++..... ...+.|.+|+.+++.++| +|....
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 47899999999999994 5799999999873322 235789999999999987 322111
Q ss_pred ---EEEEEe-----cCceEEEEeccCCCCHHHHHhhcC--CCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCC
Q 008431 315 ---IAFYYR-----KEEKLLVSDFVPNGSLANLLHVRR--APGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHL 384 (565)
Q Consensus 315 ---~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 384 (565)
..++.. ....+++|+++ +|+|.+++.... ......++|..++.++.|++.||+|||+. +|+||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~----~iiHrDi 237 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY----GLVHTYL 237 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT----TEECSCC
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC----CcccCCc
Confidence 111111 12356777766 689999985221 01122478889999999999999999998 9999999
Q ss_pred CCCCEEEcCCCCcEEeccCCccccccc-ccccccccccCCCcc----------CCCCCCcchhHHHHHHHHHHHHcCCCC
Q 008431 385 KSSNVLLDNAYEPLLTDYALVPIVNKE-HAQLHMVAYKSPEFN----------QTDGVTRKTDVWSLGILILELLTGKFP 453 (565)
Q Consensus 385 kp~NILl~~~~~~kl~DfGla~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~DvwS~Gvil~el~tg~~p 453 (565)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ ....++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998776544 34456 999999988 666788999999999999999999999
Q ss_pred ccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 008431 454 ANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGMCCCEWNAERRWDLREAVE 524 (565)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPs~~evl~ 524 (565)
|....... ....++. .... ....+.+++.+||+.||++|||+.|+++
T Consensus 317 f~~~~~~~-----------------~~~~~~~----~~~~---~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 317 NTDDAALG-----------------GSEWIFR----SCKN---IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCTTGGGS-----------------CSGGGGS----SCCC---CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcchhh-----------------hHHHHHh----hccc---CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 96322110 0011111 1111 1136888889999999999999877743
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.7e-37 Score=316.53 Aligned_cols=238 Identities=14% Similarity=0.171 Sum_probs=179.9
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccC--------ccCHHHHHHHHHHHhcCC---------CCCccceEEEE
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMS--------NVGKEDFHEHMTRLGSLS---------HPNLLPLIAFY 318 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~niv~l~~~~ 318 (565)
...+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|+.++++++ |||||++.+.+
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 4568999999999999997 78999999997542 223478899999988885 77777777765
Q ss_pred E------------------------------ecCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHH
Q 008431 319 Y------------------------------RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLA 368 (565)
Q Consensus 319 ~------------------------------~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ 368 (565)
. ..+..|+||||+++|++.+.+.. ..+++..+..++.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHHHHH
Confidence 3 15789999999999976666532 13899999999999999999
Q ss_pred HHH-hhCCCCCCccCCCCCCCEEEcCCC--------------------CcEEeccCCcccccccccccccccccCCCccC
Q 008431 369 YLY-KEFPGVTLPHGHLKSSNVLLDNAY--------------------EPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQ 427 (565)
Q Consensus 369 ylH-~~~~~~~ivHrDlkp~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~t~~y~aPE~~~ 427 (565)
||| +. +|+||||||+|||++.++ .+||+|||+++.... ....||+.|+|||++.
T Consensus 176 ~lH~~~----~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 176 VAEASL----RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-GIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHH----CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-TEEECCCCTTCSGGGC
T ss_pred HHHHhC----CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-CcEEEeecccChhhhc
Confidence 999 88 999999999999999887 899999999987654 3457899999999988
Q ss_pred CCCCCcchhHHHHHHH-HHHHHcCCCCccccccCCCCCcchHHHHHHHhhhcccCccccccccCCCCCHHHHHHHHHHHh
Q 008431 428 TDGVTRKTDVWSLGIL-ILELLTGKFPANYLAQGKGANADLATWVNSVVREEWTGEVFDKDMRGTKSGEGEMLKLLKIGM 506 (565)
Q Consensus 428 ~~~~~~~~DvwS~Gvi-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~ 506 (565)
+.. +.++||||+|++ .+++++|..||.. ..|................ .............+.+++.
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~ 317 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHR 317 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHH
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHH
Confidence 766 899999998777 7888999999852 1122111111000000000 0000011244567899999
Q ss_pred hccccCcCCCCCHHHHH
Q 008431 507 CCCEWNAERRWDLREAV 523 (565)
Q Consensus 507 ~Cl~~~P~~RPs~~evl 523 (565)
+||+.| |+.|++
T Consensus 318 ~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 318 TMLNFS-----SATDLL 329 (336)
T ss_dssp HGGGSS-----SHHHHH
T ss_pred HHhccC-----CHHHHH
Confidence 999976 999887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=6e-32 Score=293.45 Aligned_cols=183 Identities=16% Similarity=0.123 Sum_probs=131.7
Q ss_pred ceecccCceeEEEEE-EeCCCeeEEEEeeccC----------ccCHHHHHHHHHHHhcC-CCCCccceEEEEEecCceEE
Q 008431 259 EVLGSGSFGSSYKAV-LLTGPAMVVKRFRQMS----------NVGKEDFHEHMTRLGSL-SHPNLLPLIAFYYRKEEKLL 326 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 326 (565)
...+.|++|.+..++ .-.|+.+|+|.+.... ....++|.+|+++|+++ .|+||+++++++.+++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 456788888877766 5579999999996431 12235799999999999 69999999999999999999
Q ss_pred EEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 327 VSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 327 v~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
||||++||+|.++|..... ++.. +|+.||+.||+|+|++ +||||||||+|||++.++.+||+|||+|+
T Consensus 320 VMEyv~G~~L~d~i~~~~~-----l~~~---~I~~QIl~AL~ylH~~----GIIHRDIKPeNILL~~dg~vKL~DFGlAr 387 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEE-----IDRE---KILGSLLRSLAALEKQ----GFWHDDVRPWNVMVDARQHARLIDFGSIV 387 (569)
T ss_dssp EEECCCSEEHHHHHHTTCC-----CCHH---HHHHHHHHHHHHHHHT----TCEESCCCGGGEEECTTSCEEECCCTTEE
T ss_pred EEecCCCCcHHHHHHhCCC-----CCHH---HHHHHHHHHHHHHHHC----CceeccCchHhEEECCCCCEEEeecccCe
Confidence 9999999999999976432 5543 5899999999999999 99999999999999999999999999998
Q ss_pred ccccc----ccccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCCc
Q 008431 407 IVNKE----HAQLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFPA 454 (565)
Q Consensus 407 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~ 454 (565)
..... .+.+||+.|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 388 ~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 388 TTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp SCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred eCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 76543 34568999999998865 4677899999999998887765554
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=3.7e-28 Score=262.19 Aligned_cols=178 Identities=15% Similarity=0.195 Sum_probs=145.6
Q ss_pred cceecccCceeEEEEEEeCCCeeEEEEeeccCcc--------CHHHHHHHHHHHhcCCCCCccceEEEEEecCceEEEEe
Q 008431 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNV--------GKEDFHEHMTRLGSLSHPNLLPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~E 329 (565)
.++||+|+||+||+|. ..+..+++|+....... ..+.|.+|++++++++||||+++..++...+..|+|||
T Consensus 341 ~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 4689999999999994 46788999987542211 13458999999999999999977777778888999999
Q ss_pred ccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccc
Q 008431 330 FVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVN 409 (565)
Q Consensus 330 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~ 409 (565)
|+++|+|.+++.. +..++.|+++||.|||++ +|+||||||+|||++. .+||+|||+++...
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~----gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKN----DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHT----TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHC----cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 9999999999863 457999999999999998 9999999999999998 99999999998875
Q ss_pred cc-----------ccccccccccCCCccCC--CCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 410 KE-----------HAQLHMVAYKSPEFNQT--DGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 410 ~~-----------~~~~~t~~y~aPE~~~~--~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
.. ....||+.|||||++.. ..|+..+|+||..+-.++-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 43 23468999999999876 568889999999999999888887763
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2.3e-24 Score=213.55 Aligned_cols=141 Identities=15% Similarity=0.180 Sum_probs=114.2
Q ss_pred ccceecccCceeEEEEEEeCCCeeEEEEeeccCc------------------cCHHHHHHHHHHHhcCCCCCccceEEEE
Q 008431 257 SAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSN------------------VGKEDFHEHMTRLGSLSHPNLLPLIAFY 318 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~niv~l~~~~ 318 (565)
..+.||+|+||.||+|...+|+.||+|.++.... .....+.+|+.++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 3478999999999999997789999999863211 12456899999999999 5 6666655
Q ss_pred EecCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcE
Q 008431 319 YRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPL 398 (565)
Q Consensus 319 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~k 398 (565)
. .+..|+||||+++|+|.+ +. . .....++.|++.||.|||+. +|+||||||+|||++ ++.+|
T Consensus 171 ~-~~~~~lvmE~~~g~~L~~-l~---------~--~~~~~i~~qi~~~l~~lH~~----giiHrDlkp~NILl~-~~~vk 232 (282)
T 1zar_A 171 A-WEGNAVLMELIDAKELYR-VR---------V--ENPDEVLDMILEEVAKFYHR----GIVHGDLSQYNVLVS-EEGIW 232 (282)
T ss_dssp E-EETTEEEEECCCCEEGGG-CC---------C--SCHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEEE-TTEEE
T ss_pred e-ccceEEEEEecCCCcHHH-cc---------h--hhHHHHHHHHHHHHHHHHHC----CCEeCCCCHHHEEEE-CCcEE
Confidence 3 456799999999999987 42 1 12457999999999999998 999999999999999 99999
Q ss_pred EeccCCcccccccccccccccccCCCccC
Q 008431 399 LTDYALVPIVNKEHAQLHMVAYKSPEFNQ 427 (565)
Q Consensus 399 l~DfGla~~~~~~~~~~~t~~y~aPE~~~ 427 (565)
|+|||+++. +..|+|||++.
T Consensus 233 l~DFG~a~~---------~~~~~a~e~l~ 252 (282)
T 1zar_A 233 IIDFPQSVE---------VGEEGWREILE 252 (282)
T ss_dssp ECCCTTCEE---------TTSTTHHHHHH
T ss_pred EEECCCCeE---------CCCCCHHHHHH
Confidence 999999864 33578888763
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.82 E-value=1.4e-20 Score=212.32 Aligned_cols=114 Identities=38% Similarity=0.660 Sum_probs=103.2
Q ss_pred ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEc
Q 008431 39 TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDL 116 (565)
Q Consensus 39 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~l 116 (565)
+|+.|||++|+|+|.||.. |+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|.. .+++|+.||+
T Consensus 633 ~L~~LdLs~N~l~g~ip~~-l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKE-IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp CCCEEECCSSCCBSCCCGG-GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred cccEEECcCCcccccCCHH-HhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 4778999999999999976 899999999999999999999999999999999999999999999975 6889999999
Q ss_pred ccCCCccCCCcc--ccCCCCCcccCCCCCCCCCCccccc
Q 008431 117 SYNQLVGRIPDT--LSNFDATSFQGNKGLCGKPLEACKS 153 (565)
Q Consensus 117 s~N~l~g~~p~~--~~~~~~~~~~~n~~~cg~p~~~c~~ 153 (565)
|+|+|+|.+|.. |..++..+|.||+.+||.|...|..
T Consensus 712 s~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 712 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred cCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 999999999974 6788888999999999999888854
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=3.4e-20 Score=181.16 Aligned_cols=134 Identities=17% Similarity=0.202 Sum_probs=104.5
Q ss_pred ccceecccCceeEEEEEE-eCCCe--eEEEEeeccCcc------------------------CHHHHHHHHHHHhcCCCC
Q 008431 257 SAEVLGSGSFGSSYKAVL-LTGPA--MVVKRFRQMSNV------------------------GKEDFHEHMTRLGSLSHP 309 (565)
Q Consensus 257 ~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~ 309 (565)
..+.||+|+||.||+|.. .+|+. ||||.++..... ....+.+|+..|.++.|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 357899999999999997 78988 999987532111 013688999999999888
Q ss_pred Cc--cceEEEEEecCceEEEEeccCC-C----CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hhCCCCCCcc
Q 008431 310 NL--LPLIAFYYRKEEKLLVSDFVPN-G----SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLY-KEFPGVTLPH 381 (565)
Q Consensus 310 ni--v~l~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH-~~~~~~~ivH 381 (565)
++ ...+++ +..+|||||+.+ | +|.++... .++..+..++.|++.||.||| +. +|+|
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~----givH 194 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEA----ELVH 194 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTS----CEEC
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHC----CEEe
Confidence 64 333332 467899999942 4 77776432 224467789999999999999 77 9999
Q ss_pred CCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 382 GHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 382 rDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999988 9999999998654
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.73 E-value=4e-18 Score=171.40 Aligned_cols=140 Identities=36% Similarity=0.656 Sum_probs=85.9
Q ss_pred hcCCCCCCcEEEcccCcCccCCC-ccccc--ccceeecccccccccCCc----------------------chhcCCCCc
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMP-SVGKL--TLRALYLSLNKFTGEIPS----------------------DAFAGMDQL 65 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~--~L~~L~Ls~N~l~g~ip~----------------------~~~~~l~~L 65 (565)
.|..+++|++|+|++|.|++.+| .+... .|+.|+|++|+++|.+|. ..|..+++|
T Consensus 144 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L 223 (313)
T 1ogq_A 144 SISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNT 223 (313)
T ss_dssp GGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCC
T ss_pred HHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCC
Confidence 55566666666666666665554 22221 344455555544444433 335556666
Q ss_pred cEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCcc--ccCCCCCcccCCC
Q 008431 66 KKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDT--LSNFDATSFQGNK 141 (565)
Q Consensus 66 ~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~n~ 141 (565)
+.|+|++|++++.+|. +..+++|++|+|++|++++.+|.. .+++|+.|+|++|+|+|.+|.. +.++....+.+|+
T Consensus 224 ~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 224 QKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNK 302 (313)
T ss_dssp SEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSS
T ss_pred CEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCC
Confidence 6666666666654444 556666666666666666666653 4667777777777777777764 3445566788999
Q ss_pred CCCCCCCccc
Q 008431 142 GLCGKPLEAC 151 (565)
Q Consensus 142 ~~cg~p~~~c 151 (565)
.+|+.|.+.|
T Consensus 303 ~lc~~p~~~C 312 (313)
T 1ogq_A 303 CLCGSPLPAC 312 (313)
T ss_dssp EEESTTSSCC
T ss_pred CccCCCCCCC
Confidence 9999887777
No 257
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.72 E-value=6.6e-17 Score=157.08 Aligned_cols=143 Identities=24% Similarity=0.280 Sum_probs=117.8
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|.++++|+.|+|++|.|++..|. +.. .+|+.|+|++|+|+ .+|++.|.++++|+.|+|++|+|++..
T Consensus 45 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~ 123 (251)
T 3m19_A 45 TGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLP 123 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCCcC
Confidence 345566777889999999999999999987774 333 37999999999998 678778899999999999999999877
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC---CCCcccCCCCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF---DATSFQGNKGLCG 145 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~---~~~~~~~n~~~cg 145 (565)
+..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++..|..+..+ ....+.+|+..|.
T Consensus 124 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 124 SGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred hhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777899999999999999999877742 67899999999999998777666544 4556788888776
No 258
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.69 E-value=1.2e-16 Score=152.06 Aligned_cols=142 Identities=25% Similarity=0.279 Sum_probs=119.8
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc--ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCccc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS--VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ 78 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~--~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ 78 (565)
|.++.||. .+ .+.++.|+|++|+|++..|. +.. .+|+.|+|++|+|+ .+++..|.++++|++|+|++|+|++.
T Consensus 21 n~l~~iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~ 96 (220)
T 2v70_A 21 QKLNKIPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTSNRLENV 96 (220)
T ss_dssp SCCSSCCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcccCcc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-EECHHHhCCCCCCCEEECCCCccCcc
Confidence 45567875 33 34578999999999988663 333 37999999999999 67777799999999999999999998
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCC---CCcccCCCCCCCCC
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFD---ATSFQGNKGLCGKP 147 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~cg~p 147 (565)
.|..|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..|..+. ...+.+|+..|.++
T Consensus 97 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 97 QHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 8889999999999999999999987764 689999999999999999898876554 45678998888654
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.69 E-value=2.2e-16 Score=151.12 Aligned_cols=140 Identities=22% Similarity=0.302 Sum_probs=117.8
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
+..+.||.+ + .++|+.|+|++|+|++..|. +.. .+|+.|+|++|+|+ .+|+..|.++++|+.|+|++|+|++..
T Consensus 29 ~~l~~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~ 104 (229)
T 3e6j_A 29 KRHASVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLP 104 (229)
T ss_dssp SCCSSCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccC
Confidence 345678753 2 38899999999999998774 433 47999999999997 899888999999999999999999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC---CCCcccCCCCCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF---DATSFQGNKGLCGK 146 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~---~~~~~~~n~~~cg~ 146 (565)
+..|..+++|+.|+|++|+|+ .+|.. .+++|+.|+|++|+|++..+..|..+ ....+.+|+..|.+
T Consensus 105 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 105 SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred hhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 888999999999999999999 45543 68999999999999998777666544 45568899988865
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.67 E-value=2.6e-16 Score=149.73 Aligned_cols=140 Identities=25% Similarity=0.300 Sum_probs=116.8
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
....||.. +. ++|+.|+|++|+|++..+ .+... +|+.|+|++|+|+ .++++.|.++++|+.|+|++|+|+...+
T Consensus 22 ~l~~iP~~-l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 97 (220)
T 2v9t_B 22 GLTEIPTN-LP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKITELPK 97 (220)
T ss_dssp CCSSCCSS-CC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCC-EECTTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CcCcCCCc-cC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCC-CcCHHHhhCCcCCCEEECCCCcCCccCH
Confidence 34567753 32 689999999999998777 34433 7999999999999 5655669999999999999999997777
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC---CCCcccCCCCCCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF---DATSFQGNKGLCGK 146 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~---~~~~~~~n~~~cg~ 146 (565)
..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|+|++..+..|..+ ....+.+|+..|.+
T Consensus 98 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 98 SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred hHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 77899999999999999999987764 68999999999999998888776654 45568899988864
No 261
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.67 E-value=6.8e-16 Score=151.63 Aligned_cols=126 Identities=25% Similarity=0.318 Sum_probs=75.0
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCcc-c-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSV-G-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.+..+++..|.++++|++|+|++|.|+...+.. . ..+|+.|+|++|+++ .+|+..|.++++|+.|+|++|++++..|
T Consensus 48 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 126 (270)
T 2o6q_A 48 KLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPP 126 (270)
T ss_dssp CCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCH
Confidence 345566556777777777777777776554432 2 235666666666666 4555556666666666666666666555
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
..|.++++|++|+|++|++++..+.. .+++|+.|+|++|++++..+..|
T Consensus 127 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 177 (270)
T 2o6q_A 127 RVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAF 177 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred HHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHh
Confidence 55666666666666666666544431 35555666666665555444433
No 262
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.67 E-value=1.1e-17 Score=170.19 Aligned_cols=135 Identities=13% Similarity=0.154 Sum_probs=94.5
Q ss_pred hccceecccCceeEEEEEEeCCCeeEEEEeeccCc--------------cCHHHH--------HHHHHHHhcCCCCCccc
Q 008431 256 ASAEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSN--------------VGKEDF--------HEHMTRLGSLSHPNLLP 313 (565)
Q Consensus 256 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~H~niv~ 313 (565)
.....||+|+||.||+|...+|+.||||.++.... ...... .+|...|.++.+.++.
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~- 176 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP- 176 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS-
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 34678999999999999988999999998753110 011122 2355555555433322
Q ss_pred eEEEEEecCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcC
Q 008431 314 LIAFYYRKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDN 393 (565)
Q Consensus 314 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~ 393 (565)
....+. ....+|||||+++++|.++.. . .....++.|++.+|.|||+. +||||||||.|||+++
T Consensus 177 vp~p~~-~~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~~----gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 177 VPEPIA-QSRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAKH----GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CCCEEE-EETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHHT----TEECSCCSTTSEEEEE
T ss_pred CCeeee-ccCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHHC----CCcCCCCCHHHEEEeC
Confidence 111111 123479999999988865421 1 23456889999999999998 9999999999999987
Q ss_pred CC----------CcEEeccCCccc
Q 008431 394 AY----------EPLLTDYALVPI 407 (565)
Q Consensus 394 ~~----------~~kl~DfGla~~ 407 (565)
++ .+.|+||+-+-.
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCcccccccccceEEEEeCCccc
Confidence 76 378999986543
No 263
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.66 E-value=3.2e-16 Score=149.11 Aligned_cols=122 Identities=25% Similarity=0.333 Sum_probs=109.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|..+++|+.|+|++|+|++..| .+.. .+|+.|+|++|+|+ .+|+.+|.++++|+.|+|++|+|++..
T Consensus 42 n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~ 120 (220)
T 2v9t_B 42 NTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLR 120 (220)
T ss_dssp SCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeC
Confidence 55677888889999999999999999998877 3444 47999999999999 899998999999999999999999999
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGR 124 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~ 124 (565)
|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|++...
T Consensus 121 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 121 VDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred HHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999999999999999999999887763 688999999999999753
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.66 E-value=2.9e-16 Score=149.33 Aligned_cols=123 Identities=22% Similarity=0.326 Sum_probs=108.4
Q ss_pred ccccc-ChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 3 LMGMI-DVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 3 ~~g~i-~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
.+..+ +.+.|..+++|+.|+|++|+|++..+ .+..+ +|+.|+|++|+|+ .+|+++|.++++|++|+|++|+|++..
T Consensus 43 ~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 121 (220)
T 2v70_A 43 EFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVG 121 (220)
T ss_dssp CCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCGGGGTTCSSCCEEECTTSCCCCBC
T ss_pred cCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccC-ccCHhHhcCCcCCCEEECCCCcCCeEC
Confidence 34445 45568999999999999999998877 45444 7999999999999 678888999999999999999999999
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
|..|.++++|+.|+|++|+|++..|.. .+++|+.|+|++|.+++..+
T Consensus 122 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 122 NDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred HhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999999999999999999987764 68899999999999987655
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.65 E-value=2.1e-16 Score=178.27 Aligned_cols=80 Identities=36% Similarity=0.563 Sum_probs=55.3
Q ss_pred CCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCCC---Cc
Q 008431 62 MDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFDA---TS 136 (565)
Q Consensus 62 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~ 136 (565)
+++|+.|+|++|+|+|.+|..|+++++|+.|+|++|+|+|.+|.. .+++|+.||||+|+|+|.+|..+.+++. ..
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 456677777777777777777777777777777777777777763 5677777777777777777776655443 34
Q ss_pred ccCCC
Q 008431 137 FQGNK 141 (565)
Q Consensus 137 ~~~n~ 141 (565)
+.+|+
T Consensus 711 ls~N~ 715 (768)
T 3rgz_A 711 LSNNN 715 (768)
T ss_dssp CCSSE
T ss_pred CcCCc
Confidence 45553
No 266
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.65 E-value=1.3e-15 Score=149.78 Aligned_cols=135 Identities=23% Similarity=0.273 Sum_probs=73.6
Q ss_pred hcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCC
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQK 88 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 88 (565)
.+..+++|++|+|++|.|++..+. +.. .+|+.|+|++|+++ .+|+..|.++++|+.|+|++|++++..|..|+.+++
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 158 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTN 158 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCcc
Confidence 355555555555555555554442 222 24666666666665 444444555666666666666666555555556666
Q ss_pred CCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC---CCCcccCCCCCCCC
Q 008431 89 LLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF---DATSFQGNKGLCGK 146 (565)
Q Consensus 89 L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~---~~~~~~~n~~~cg~ 146 (565)
|+.|+|++|++++..+.. .+++|+.|++++|++++..|..+..+ ....+.+|+..|.+
T Consensus 159 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 666666666666544432 45566666666666665555444332 33345556555543
No 267
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.65 E-value=1.2e-16 Score=164.02 Aligned_cols=144 Identities=24% Similarity=0.250 Sum_probs=108.5
Q ss_pred CcccccChhhcC-CCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCccc
Q 008431 2 NLMGMIDVDTLS-RLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ 78 (565)
Q Consensus 2 n~~g~i~~~~~~-~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ 78 (565)
|.+..++++.|. ++++|+.|+|++|+|++..+. +..+ +|+.|+|++|+|+ .+|++.|.++++|+.|+|++|+|++.
T Consensus 49 N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~ 127 (361)
T 2xot_A 49 NNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVV 127 (361)
T ss_dssp SCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCC-cCCHHHhCCCcCCCEEECCCCcccEE
Confidence 445666666676 888888888888888877663 4333 6888888888888 67777788888888888888888887
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCCC-----CCCCCCEEEcccCCCccCCCccccCCC-----CCcccCCCCCCCC
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPDF-----PLAHLTLLDLSYNQLVGRIPDTLSNFD-----ATSFQGNKGLCGK 146 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~-----~~~~L~~l~ls~N~l~g~~p~~~~~~~-----~~~~~~n~~~cg~ 146 (565)
.|..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|+|++..+..+..++ ...+.+|+..|.+
T Consensus 128 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 128 DRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 7888888888888888888888654432 377888888888888865555555443 3567888888864
No 268
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=1.1e-15 Score=142.20 Aligned_cols=121 Identities=27% Similarity=0.353 Sum_probs=97.6
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc--cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCccc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS--VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ 78 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ 78 (565)
|.++.||.. +. .+|+.|+|++|+|++..+. +..+ +|+.|+|++|+|++ ++++.|.++++|++|+|++|+|++.
T Consensus 18 ~~l~~ip~~-~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~ 93 (192)
T 1w8a_A 18 RGLKEIPRD-IP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKIKEI 93 (192)
T ss_dssp SCCSSCCSC-CC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSCCCCEE
T ss_pred CCcCcCccC-CC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCC-cCHhHcCCcccCCEEECCCCcCCcc
Confidence 345677753 32 2789999999999887763 4433 69999999999985 4445688999999999999999988
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
.|..|.++++|++|+|++|+|++.+|.. .+++|+.|+|++|++++..+
T Consensus 94 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 94 SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888999999999999999999887764 67889999999999987665
No 269
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.65 E-value=8.2e-16 Score=152.70 Aligned_cols=126 Identities=24% Similarity=0.258 Sum_probs=79.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPK 81 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~ 81 (565)
|.++.+++..|..+++|+.|+|++|.|++..+.....+|+.|+|++|+|+ .+|.. +.++++|++|+|++|+|++..|.
T Consensus 41 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~-~~~l~~L~~L~l~~N~l~~l~~~ 118 (290)
T 1p9a_G 41 NLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLL-GQTLPALTVLDVSFNRLTSLPLG 118 (290)
T ss_dssp SCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCC-TTTCTTCCEEECCSSCCCCCCSS
T ss_pred CcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchh-hccCCCCCEEECCCCcCcccCHH
Confidence 44555666678888888888888888876544322335666666666666 56653 56666666666666666665556
Q ss_pred cccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 82 SLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 82 ~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
.|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++..+..|
T Consensus 119 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 168 (290)
T 1p9a_G 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 168 (290)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTT
T ss_pred HHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHh
Confidence 6666666666666666666554432 45666666666666665444333
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=1.4e-15 Score=141.42 Aligned_cols=129 Identities=19% Similarity=0.290 Sum_probs=109.5
Q ss_pred CcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCC
Q 008431 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGN 97 (565)
Q Consensus 18 L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 97 (565)
-+.|++++|.|+..+..+. ..|+.|+|++|+|++..+..+|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 10 ~~~l~~s~~~l~~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 10 GTTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TTEEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CCEEEcCCCCcCcCccCCC-CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3789999999975444443 389999999999994434446999999999999999999999999999999999999999
Q ss_pred cCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCC---CCcccCCCCCCCCC
Q 008431 98 SFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFD---ATSFQGNKGLCGKP 147 (565)
Q Consensus 98 ~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~cg~p 147 (565)
+|++..|.. .+++|+.|+|++|+|++.+|..|..++ ...+.+|+..|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999988863 689999999999999999998876554 45678998888653
No 271
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.63 E-value=1e-15 Score=151.43 Aligned_cols=129 Identities=22% Similarity=0.281 Sum_probs=84.4
Q ss_pred cccccChhhcCCCCCCcEEEcccCc-CccCCC-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNS-FDGPMP-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~-l~~~~p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
.+..+++..|..+++|+.|+|++|. +....| .+.. .+|+.|+|++|+++ .+++..|.++++|++|+|++|++++..
T Consensus 67 ~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 67 VLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCC-EECHhHhhCCcCCCEEECCCCcccccC
Confidence 3445555567777777777777776 555544 2332 35777777777777 454455777777777777777777666
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF 132 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~ 132 (565)
+..|+++++|+.|+|++|++++..+.. .+++|+.|++++|++++..|..+..+
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 200 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCc
Confidence 666777777777777777777555432 46677777777777776666665443
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.62 E-value=4.1e-16 Score=156.71 Aligned_cols=126 Identities=33% Similarity=0.612 Sum_probs=101.5
Q ss_pred ccChhhcCCCCCCcEEEccc-CcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcc
Q 008431 6 MIDVDTLSRLPGLRSLSFIN-NSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKS 82 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~-N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~ 82 (565)
.+|. .|+++++|++|+|++ |.+.+.+| .+..+ +|++|+|++|+|+|.+|.. |.++++|++|+|++|++++.+|..
T Consensus 67 ~~~~-~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 144 (313)
T 1ogq_A 67 PIPS-SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDF-LSQIKTLVTLDFSYNALSGTLPPS 144 (313)
T ss_dssp ECCG-GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGG-GGGCTTCCEEECCSSEEESCCCGG
T ss_pred ccCh-hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHH-HhCCCCCCEEeCCCCccCCcCChH
Confidence 6764 788888888888884 88888777 44444 6888888888888777765 888888888888888888888888
Q ss_pred ccCCCCCCEEeccCCcCCCCCCCC--CCC-CCCEEEcccCCCccCCCccccCCC
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIPDF--PLA-HLTLLDLSYNQLVGRIPDTLSNFD 133 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p~~--~~~-~L~~l~ls~N~l~g~~p~~~~~~~ 133 (565)
|.++++|++|+|++|+++|.+|.. .+. +|+.|++++|+++|.+|..+..+.
T Consensus 145 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred HhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 888888888888888888877763 455 888888888888888888776543
No 273
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.62 E-value=3.3e-15 Score=140.58 Aligned_cols=140 Identities=21% Similarity=0.244 Sum_probs=115.1
Q ss_pred ccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCc
Q 008431 4 MGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPK 81 (565)
Q Consensus 4 ~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~ 81 (565)
...+|.. -.++|++|+|++|+|++..+. +.. .+|+.|+|++|+|+ .+|+..|.++++|++|+|++|+|++..+.
T Consensus 19 l~~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 94 (208)
T 2o6s_A 19 RTSVPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNG 94 (208)
T ss_dssp CSSCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred ccCCCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECCCCcCCccCHh
Confidence 3456542 256899999999999987764 333 47999999999999 78888899999999999999999987777
Q ss_pred cccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCCCC
Q 008431 82 SLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCGKP 147 (565)
Q Consensus 82 ~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg~p 147 (565)
.|.++++|++|+|++|++++..+.. .+++|+.|++++|++++..+..+.. +....+.+|+..|..+
T Consensus 95 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 95 VFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred HhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 8899999999999999999877753 6889999999999999877765554 4455678998887654
No 274
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.61 E-value=6.9e-15 Score=138.41 Aligned_cols=125 Identities=22% Similarity=0.252 Sum_probs=106.3
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cc-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|..+++|+.|+|++|+|++..+. +. ..+|++|+|++|+|+ .+|+..|.++++|+.|+|++|+|++..
T Consensus 38 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~ 116 (208)
T 2o6s_A 38 NSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLP 116 (208)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccC
Confidence 345577777889999999999999999977664 33 347999999999999 678777899999999999999999877
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~ 127 (565)
+..|.++++|+.|+|++|++++..+.. .+++|+.|++++|.+.+..|.
T Consensus 117 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 117 DGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred HhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 778899999999999999999777653 578999999999999887663
No 275
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.61 E-value=3.9e-15 Score=144.48 Aligned_cols=123 Identities=24% Similarity=0.302 Sum_probs=108.5
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cc-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|..+++|+.|+|++|+|++..+. +. ..+|+.|+|++|+|+ .+|+..|.++++|+.|+|++|+|++..
T Consensus 69 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 69 NQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccC
Confidence 455667778899999999999999999987774 33 347999999999999 788888999999999999999999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRI 125 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~ 125 (565)
|..|+++++|+.|+|++|+|++..+.. .+++|+.|+|++|++++..
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 878999999999999999999877753 6789999999999998763
No 276
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.60 E-value=4.6e-15 Score=141.96 Aligned_cols=123 Identities=22% Similarity=0.279 Sum_probs=107.5
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cc-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|..+++|+.|+|++|+|+...+. +. ..+|+.|+|++|+|+ .+|+..|..+++|+.|+|++|+|+ .+
T Consensus 50 n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~l 127 (229)
T 3e6j_A 50 NQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-EL 127 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SC
T ss_pred CccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-cc
Confidence 445567677899999999999999999877664 33 347999999999999 788888999999999999999999 78
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
|..+..+++|+.|+|++|+|++..+.. .+++|+.|+|++|.+++..+
T Consensus 128 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 128 PRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999999999999999999776653 68899999999999987655
No 277
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.60 E-value=2.5e-15 Score=151.96 Aligned_cols=143 Identities=21% Similarity=0.297 Sum_probs=118.7
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cc----------ccccceeecccccccccCCcchhcCCCCccEEEc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VG----------KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHL 70 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~----------~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l 70 (565)
|.+..||. .|+++++|+.|+|++|++.+.+|. +. ..+|+.|+|++|+|+ .+|.. |.++++|+.|+|
T Consensus 137 n~l~~lp~-~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~-l~~l~~L~~L~L 213 (328)
T 4fcg_A 137 NPLRALPA-SIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPAS-IANLQNLKSLKI 213 (328)
T ss_dssp CCCCCCCG-GGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGG-GGGCTTCCEEEE
T ss_pred CccccCcH-HHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHh-hcCCCCCCEEEc
Confidence 44557875 689999999999999999888884 32 347999999999999 89976 899999999999
Q ss_pred cCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCC---CCcccCCCCCCC
Q 008431 71 ARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFD---ATSFQGNKGLCG 145 (565)
Q Consensus 71 ~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~cg 145 (565)
++|++++ +|..|+.+++|+.|+|++|++.+.+|.. .+++|+.|+|++|++.+.+|..+.+++ ...+.+|+....
T Consensus 214 ~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 214 RNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp ESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred cCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 9999995 6778999999999999999999998874 688999999999999999998776554 445677765554
Q ss_pred CCC
Q 008431 146 KPL 148 (565)
Q Consensus 146 ~p~ 148 (565)
.|.
T Consensus 293 iP~ 295 (328)
T 4fcg_A 293 LPS 295 (328)
T ss_dssp CCG
T ss_pred ccH
Confidence 443
No 278
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.60 E-value=6.5e-15 Score=144.76 Aligned_cols=125 Identities=20% Similarity=0.286 Sum_probs=110.7
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|+.+++|+.|+|++|++++..+. +.. .+|+.|+|++|+|+ .+|+..|.++++|+.|+|++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEECCCCCcCccC
Confidence 455678877899999999999999999988774 343 47999999999999 677777999999999999999999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~ 127 (565)
|..|+++++|+.|+|++|++++..|.. .+++|+.|++++|.+.+.+|.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 888999999999999999999988763 689999999999999987763
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.59 E-value=9.7e-15 Score=143.32 Aligned_cols=109 Identities=26% Similarity=0.409 Sum_probs=52.0
Q ss_pred CCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEec
Q 008431 17 GLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNL 94 (565)
Q Consensus 17 ~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 94 (565)
+|+.|+|++|+|++..+ .+... +|++|+|++|+|+ .+|+.+|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 44555555555544433 22222 4555555555554 444444455555555555555555444444455555555555
Q ss_pred cCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 95 EGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 95 ~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
++|++++..+.. .+++|+.|+|++|+|++..+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 150 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK 150 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCH
Confidence 555555444332 34455555555555544333
No 280
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.58 E-value=5.3e-15 Score=147.87 Aligned_cols=135 Identities=21% Similarity=0.272 Sum_probs=81.8
Q ss_pred hhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeeccccccccc-CCcchhcCCCCccEEEccCCcCcccCCccccCC
Q 008431 10 DTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGE-IPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGL 86 (565)
Q Consensus 10 ~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l 86 (565)
..+..+++|+.|+|++|.+++..|. +.. .+|+.|+|++|.+++. +|. .|..+++|+.|+|++|++++..|..|.++
T Consensus 120 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 198 (306)
T 2z66_A 120 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPD-IFTELRNLTFLDLSQCQLEQLSPTAFNSL 198 (306)
T ss_dssp TTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECS-CCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchh-HHhhCcCCCEEECCCCCcCCcCHHHhcCC
Confidence 3456666666666666666655553 222 2566666666666642 333 36666677777777777766666666666
Q ss_pred CCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC----CCCcccCCCCCCC
Q 008431 87 QKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF----DATSFQGNKGLCG 145 (565)
Q Consensus 87 ~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~----~~~~~~~n~~~cg 145 (565)
++|+.|+|++|++++..+.. .+++|+.|++++|++++..|..+..+ ....+.+|+..|.
T Consensus 199 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 199 SSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp TTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 77777777777766544422 45667777777777776666655443 2334566665554
No 281
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.57 E-value=4.7e-15 Score=163.15 Aligned_cols=144 Identities=21% Similarity=0.257 Sum_probs=123.2
Q ss_pred ccccChhhcCCCCCCcEEEcccCcCccCCCcc--cccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCc
Q 008431 4 MGMIDVDTLSRLPGLRSLSFINNSFDGPMPSV--GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPK 81 (565)
Q Consensus 4 ~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~ 81 (565)
.+.++...|..+++|+.++++.|.+.+..|.. ....|+.|+|++|++.+.++++.|..+++|+.|+|++|+|++.+|.
T Consensus 433 ~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~ 512 (635)
T 4g8a_A 433 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512 (635)
T ss_dssp ESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChH
Confidence 34455567888999999999999999887743 3347999999999876566666799999999999999999999999
Q ss_pred cccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCC----CCCcccCCCCCCCCC
Q 008431 82 SLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNF----DATSFQGNKGLCGKP 147 (565)
Q Consensus 82 ~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~----~~~~~~~n~~~cg~p 147 (565)
.|.++++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..|..+..+ ....+.+|++.|.+.
T Consensus 513 ~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred HHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999999887763 68999999999999999999987654 345789999999764
No 282
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.57 E-value=4.9e-15 Score=162.96 Aligned_cols=126 Identities=21% Similarity=0.294 Sum_probs=63.7
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.+..||+++|.++++|++|+|++|+|++..|. +.. .+|++|+|++|+|+ .+|+++|.++++|++|+|++|+|++..+
T Consensus 63 ~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~ 141 (635)
T 4g8a_A 63 PLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLEN 141 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTT
T ss_pred CCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCCh
Confidence 34445545555555555555555555554442 222 24555555555555 4555555555555555555555554444
Q ss_pred ccccCCCCCCEEeccCCcCCCC-CCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGK-IPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~-~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
..|+++++|++|+|++|++++. +|.. .+++|+.|++++|+|++..|..+
T Consensus 142 ~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 142 FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp CCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred hhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 4555555555555555555432 2222 34555555555555555444443
No 283
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.1e-14 Score=135.35 Aligned_cols=127 Identities=21% Similarity=0.266 Sum_probs=104.0
Q ss_pred CcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCC
Q 008431 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGN 97 (565)
Q Consensus 18 L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 97 (565)
-+.+++++|.|+..+..+ ...|+.|+|++|+|+ .+|. .|.++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~~~l~~~~~~l~~ip~~~-~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 12 DTVVRCSNKGLKVLPKGI-PRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TTEEECTTSCCSSCCSCC-CTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEcCCCCCCcCCCCC-CCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 367899999998644333 247999999999998 8884 5899999999999999999888888999999999999999
Q ss_pred cCCCCCCCC--CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCCCC
Q 008431 98 SFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCGKP 147 (565)
Q Consensus 98 ~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg~p 147 (565)
+|++..|.. .+++|+.|+|++|+|++..+..|.. +....+.+|+..|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 999887753 6789999999999999776666654 4455678898888653
No 284
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=134.61 Aligned_cols=120 Identities=22% Similarity=0.279 Sum_probs=102.0
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
|.+..||.+ + .++|+.|+|++|+|+..++.+... +|+.|+|++|+|+ .+++++|.++++|+.|+|++|+|++..|
T Consensus 20 ~~l~~ip~~-~--~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~ 95 (193)
T 2wfh_A 20 KGLKVLPKG-I--PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCIPP 95 (193)
T ss_dssp SCCSSCCSC-C--CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred CCCCcCCCC-C--CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECCCCccCEeCH
Confidence 445678753 3 358999999999999544455444 7999999999999 6887889999999999999999999889
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRI 125 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~ 125 (565)
..|.++++|+.|+|++|+|++..+.. .+++|+.|+|++|.+....
T Consensus 96 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 96 RTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred HHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 99999999999999999999776653 6889999999999997543
No 285
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.57 E-value=1.4e-14 Score=146.41 Aligned_cols=144 Identities=22% Similarity=0.302 Sum_probs=117.5
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcch--------hcCCCCccEEEccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDA--------FAGMDQLKKVHLAR 72 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~--------~~~l~~L~~L~l~~ 72 (565)
|.+..||. .|+.+++|++|+|++|.|+..++.+..+ +|+.|+|++|++.+.+|... |.++++|+.|+|++
T Consensus 114 n~l~~lp~-~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~ 192 (328)
T 4fcg_A 114 AGLMELPD-TMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEW 192 (328)
T ss_dssp SCCCCCCS-CGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEE
T ss_pred CCccchhH-HHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcC
Confidence 34457874 7899999999999999999443355554 79999999999999999763 34599999999999
Q ss_pred CcCcccCCccccCCCCCCEEeccCCcCCCCCCCC-CCCCCCEEEcccCCCccCCCccccCCCC---CcccCCCCCCCCC
Q 008431 73 NHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVGRIPDTLSNFDA---TSFQGNKGLCGKP 147 (565)
Q Consensus 73 N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~~---~~~~~n~~~cg~p 147 (565)
|+|+ .+|..|+++++|+.|+|++|++++.++.. .+++|+.|+|++|++.+.+|..+..++. ..+.+|......|
T Consensus 193 n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p 270 (328)
T 4fcg_A 193 TGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLP 270 (328)
T ss_dssp ECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCC
T ss_pred CCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcc
Confidence 9999 89999999999999999999999765554 6889999999999999999998776554 4566665444333
No 286
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.4e-14 Score=132.62 Aligned_cols=125 Identities=22% Similarity=0.250 Sum_probs=60.3
Q ss_pred cEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCc
Q 008431 19 RSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNS 98 (565)
Q Consensus 19 ~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~ 98 (565)
+.+++++|+++..+..+. .+|+.|+|++|+|+ .+|+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 10 ~~l~~~~~~l~~~p~~~~-~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP-SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TEEECCSSCCSSCCTTCC-TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCccCCCCCC-CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 445555555543322221 24555555555555 3444445555555555555555554444445555555555555555
Q ss_pred CCCCCCCC--CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCC
Q 008431 99 FQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCG 145 (565)
Q Consensus 99 l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg 145 (565)
+++..+.. .+++|+.|++++|+|++..+..+.. +....+.+|+..|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 55444431 3455555555555555443333322 22333445544443
No 287
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.56 E-value=1.7e-14 Score=152.55 Aligned_cols=105 Identities=23% Similarity=0.301 Sum_probs=70.1
Q ss_pred cceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcc
Q 008431 40 LRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLS 117 (565)
Q Consensus 40 L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls 117 (565)
|+.|+|++|+|+ .+|. +..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|.. .+++|+.|+|+
T Consensus 198 L~~L~L~~n~l~-~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 198 LKYLNLGMCNIK-DMPN--LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274 (452)
T ss_dssp CCEEECTTSCCS-SCCC--CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCccc-cccc--ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECC
Confidence 444444444444 3332 445556666666667777666777777778888888888877766653 56788888888
Q ss_pred cCCCccCCCccccC---CCCCcccCCCCCCCCC
Q 008431 118 YNQLVGRIPDTLSN---FDATSFQGNKGLCGKP 147 (565)
Q Consensus 118 ~N~l~g~~p~~~~~---~~~~~~~~n~~~cg~p 147 (565)
+|+|++..+..|.. +....+.+|+..|.+.
T Consensus 275 ~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 275 HNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp SSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 88888766665544 3445678888888764
No 288
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.55 E-value=2.7e-14 Score=141.25 Aligned_cols=122 Identities=24% Similarity=0.246 Sum_probs=58.6
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCC-cccc-cccceeeccccc-ccccCCcchhcCCCCccEEEccCCcCcccCCc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNK-FTGEIPSDAFAGMDQLKKVHLARNHFSGQIPK 81 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~-l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~ 81 (565)
..++++.|..+++|+.|+|++|.+++..| .+.. .+|+.|+|++|+ ++ .+++..|.++++|++|+|++|++++..|.
T Consensus 45 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 123 (285)
T 1ozn_A 45 SHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPG 123 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred CccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHh
Confidence 33444445555555555555555554433 2222 245555555554 33 34333455555555555555555544455
Q ss_pred cccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCc
Q 008431 82 SLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 82 ~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~ 127 (565)
.|.++++|++|+|++|++++..+.. .+++|+.|++++|++++..+.
T Consensus 124 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 124 LFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred HhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 5555555555555555555443331 344555555555555544333
No 289
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.55 E-value=5.4e-15 Score=148.20 Aligned_cols=138 Identities=24% Similarity=0.261 Sum_probs=85.1
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccC---CCcc--c-ccccceeecccccccccCCc---chhcCCCCccEEEccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGP---MPSV--G-KLTLRALYLSLNKFTGEIPS---DAFAGMDQLKKVHLARN 73 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~---~p~~--~-~~~L~~L~Ls~N~l~g~ip~---~~~~~l~~L~~L~l~~N 73 (565)
.+..+++..|+.+++|++|+|++|++.+. .+.. . ..+|++|+|++|+|+ .+|. ..+.++++|++|+|++|
T Consensus 156 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N 234 (310)
T 4glp_A 156 HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHN 234 (310)
T ss_dssp SSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTS
T ss_pred CcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCC
Confidence 34455555666677777777777766541 1111 1 225777777777765 3332 23566677777777777
Q ss_pred cCcccCCccccCC---CCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCcc-CCCccccCCCCCcccCCCC
Q 008431 74 HFSGQIPKSLAGL---QKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVG-RIPDTLSNFDATSFQGNKG 142 (565)
Q Consensus 74 ~l~g~~p~~~~~l---~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g-~~p~~~~~~~~~~~~~n~~ 142 (565)
+|++.+|..+..+ ++|++|+|++|+|+ .+|....++|+.|+|++|+|++ +.+..+.++....+.+|+.
T Consensus 235 ~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 235 SLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPF 306 (310)
T ss_dssp CCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTT
T ss_pred CCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCCCchhhhCCCccEEECcCCCC
Confidence 7777667666665 47777777777777 4454434677777777777776 4445555555666666653
No 290
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.55 E-value=1.6e-14 Score=142.12 Aligned_cols=145 Identities=19% Similarity=0.213 Sum_probs=100.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCccc-
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ- 78 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~- 78 (565)
|.+..+++..|..+++|+.|+|++|.|++..+. +.. .+|+.|+|++|+++ .+++..|..+++|++|+|++|++++.
T Consensus 62 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~ 140 (276)
T 2z62_A 62 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFK 140 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCC
T ss_pred CcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccceec
Confidence 445567777788888888888888888877653 333 36888888888887 45555577888888888888888763
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCCC-----------------------------CCCCCCEEEcccCCCccCCCccc
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPDF-----------------------------PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~-----------------------------~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
+|..|+++++|+.|+|++|++++..+.. ...+|+.|++++|+|++..+..+
T Consensus 141 l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 220 (276)
T 2z62_A 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIF 220 (276)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTT
T ss_pred CchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHh
Confidence 5778888888888888888877654321 12357777777777776555444
Q ss_pred cCC---CCCcccCCCCCCCCC
Q 008431 130 SNF---DATSFQGNKGLCGKP 147 (565)
Q Consensus 130 ~~~---~~~~~~~n~~~cg~p 147 (565)
..+ ....+.+|+..|.++
T Consensus 221 ~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 221 DRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp TTCCSCCEEECCSSCBCCCTT
T ss_pred cccccccEEEccCCcccccCC
Confidence 433 344567777777654
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.54 E-value=9.3e-15 Score=160.31 Aligned_cols=138 Identities=19% Similarity=0.171 Sum_probs=88.9
Q ss_pred hhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCC
Q 008431 10 DTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQ 87 (565)
Q Consensus 10 ~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~ 87 (565)
..|..+++|+.|+|++|.+++.+|. +.. .+|+.|+|++|++++.+++..|.++++|+.|+|++|++++..|..|.+++
T Consensus 418 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 497 (606)
T 3vq2_A 418 SAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH 497 (606)
T ss_dssp TTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccc
Confidence 4566666666666666666665552 322 25777777777777543333467777777777777777777777777777
Q ss_pred CCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccC----CCCCcccCCCCCCCCCC
Q 008431 88 KLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN----FDATSFQGNKGLCGKPL 148 (565)
Q Consensus 88 ~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~----~~~~~~~~n~~~cg~p~ 148 (565)
+|+.|+|++|++++.+|.. .+++|+.|++++|+|+ .+|..+.. +....+.+|+..|.++.
T Consensus 498 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 498 RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 7777777777777765553 4667777777777776 45544443 33345677777776543
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=150.96 Aligned_cols=143 Identities=24% Similarity=0.281 Sum_probs=101.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cc--------------------------ccccceeecccccccccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VG--------------------------KLTLRALYLSLNKFTGEI 54 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~--------------------------~~~L~~L~Ls~N~l~g~i 54 (565)
|.+..++++.|..+++|+.|+|++|.|+...+. +. ..+|+.|+|++|+|+ .+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 445567776777888888888888877654431 11 124666666666666 56
Q ss_pred CcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccC-
Q 008431 55 PSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN- 131 (565)
Q Consensus 55 p~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~- 131 (565)
|. +..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++..+..|..
T Consensus 201 ~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 201 PN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 63 666777777777777777777788888888888888888888766653 5788888999999888777666554
Q ss_pred --CCCCcccCCCCCCCCC
Q 008431 132 --FDATSFQGNKGLCGKP 147 (565)
Q Consensus 132 --~~~~~~~~n~~~cg~p 147 (565)
+....+.+|+..|.+.
T Consensus 279 ~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TTCCEEECCSSCEECSST
T ss_pred cCCCEEEcCCCCccCCCC
Confidence 4455678898888764
No 293
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.53 E-value=1.9e-14 Score=157.57 Aligned_cols=138 Identities=19% Similarity=0.219 Sum_probs=110.7
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.++.+|+..|..+++|+.|+|++|.|++.+| .+..+ +|+.|+|++|.|+ .+|+..|+++++|+.|+|++|.|++..
T Consensus 61 ~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~ 139 (597)
T 3oja_B 61 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLP 139 (597)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-CCCHHHHcCCCCCCEEEeeCCCCCCCC
Confidence 44577888778889999999999999988777 45444 6999999999998 466677889999999999999998766
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCCCCcccCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGN 140 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n 140 (565)
|..|+++++|++|+|++|.+++..|.. .+++|+.|+|++|+|++..+..+.++....+.+|
T Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred HHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 666789999999999999999887763 6788999999999998766566666655555555
No 294
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=6.8e-14 Score=128.02 Aligned_cols=120 Identities=19% Similarity=0.213 Sum_probs=102.9
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.+..+|.. -.++|+.|+|++|+|++..+. +.. .+|+.|+|++|+|+ .+|+..|.++++|+.|+|++|+|++..+
T Consensus 18 ~l~~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 93 (177)
T 2o6r_A 18 GLTSVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHENKLQSLPN 93 (177)
T ss_dssp CCSSCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEECCCCCccccCH
Confidence 34567643 247899999999999987764 343 47999999999999 7888889999999999999999998888
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|++++..|
T Consensus 94 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 94 GVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88999999999999999999776653 58899999999999998766
No 295
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=4.4e-14 Score=128.47 Aligned_cols=108 Identities=21% Similarity=0.222 Sum_probs=91.4
Q ss_pred CCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccC
Q 008431 17 GLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEG 96 (565)
Q Consensus 17 ~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 96 (565)
..+.|++++|.|+..+..+. ..|+.|+|++|+|+ .++++.|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~-~~l~~L~L~~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP-TTTQVLYLYDNQIT-KLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC-TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCC-CCCcEEEcCCCcCC-ccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 46789999999997544443 57999999999999 56666799999999999999999988888889999999999999
Q ss_pred CcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 97 NSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 97 N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
|+|++..+.. .+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999877753 68899999999999875543
No 296
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.52 E-value=5.7e-14 Score=139.34 Aligned_cols=141 Identities=26% Similarity=0.322 Sum_probs=116.8
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCcccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
|.+..+++ .+.+++|+.|+|++|+|+..+..+.. .+|+.|+|++|+|+ .+|++.|.++++|+.|+|++|+|++..+
T Consensus 65 n~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~ 141 (290)
T 1p9a_G 65 AELTKLQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPP 141 (290)
T ss_dssp SCCCEEEC--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CccCcccC--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccCh
Confidence 34455654 37899999999999999965444433 47999999999999 7888889999999999999999998888
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCGK 146 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg~ 146 (565)
..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+ .+|..+.. +....+.+|+..|.+
T Consensus 142 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 142 GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred hhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 88999999999999999999766653 5899999999999999 56665443 444567899998864
No 297
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.52 E-value=1.8e-14 Score=141.76 Aligned_cols=114 Identities=20% Similarity=0.210 Sum_probs=69.6
Q ss_pred CCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEec
Q 008431 17 GLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNL 94 (565)
Q Consensus 17 ~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 94 (565)
+|+.|+|++|.|++..+ .+... +|+.|+|++|+++ .+++..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 56666666666665554 33322 5666666666666 455555666666666666666666666666666666666666
Q ss_pred cCCcCCCCCCC--CCCCCCCEEEcccCCCccC-CCccccC
Q 008431 95 EGNSFQGKIPD--FPLAHLTLLDLSYNQLVGR-IPDTLSN 131 (565)
Q Consensus 95 ~~N~l~g~~p~--~~~~~L~~l~ls~N~l~g~-~p~~~~~ 131 (565)
++|++++..+. ..+++|+.|++++|++++. +|..+.+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~ 147 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN 147 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhcc
Confidence 66666655442 1456666666666666652 4555443
No 298
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.52 E-value=4.5e-14 Score=149.17 Aligned_cols=133 Identities=23% Similarity=0.282 Sum_probs=112.4
Q ss_pred CCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEE
Q 008431 15 LPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQL 92 (565)
Q Consensus 15 l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L 92 (565)
.++|+.|+|++|.+++.+|. +..+ +|+.|+|++|++++ +++..|.++++|+.|+|++|++++..|..|.++++|++|
T Consensus 274 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 352 (455)
T 3v47_A 274 ASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINK-IDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352 (455)
T ss_dssp TSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEE
T ss_pred ccCceEEEecCccccccchhhcccCCCCCEEECCCCcccc-cChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEE
Confidence 36899999999999988774 4433 79999999999994 555569999999999999999998889999999999999
Q ss_pred eccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCCCCC
Q 008431 93 NLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCGKPL 148 (565)
Q Consensus 93 ~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg~p~ 148 (565)
+|++|++++..|.. .+++|+.|+|++|+|++..+..+.. +....+.+|+..|.+|.
T Consensus 353 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 353 DLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999999887764 6899999999999999876665554 45567889999888763
No 299
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.50 E-value=9.2e-15 Score=161.22 Aligned_cols=135 Identities=21% Similarity=0.335 Sum_probs=114.0
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccC-----------------CC-ccc--cc-ccceeecccccccccCCcchhc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGP-----------------MP-SVG--KL-TLRALYLSLNKFTGEIPSDAFA 60 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~-----------------~p-~~~--~~-~L~~L~Ls~N~l~g~ip~~~~~ 60 (565)
++.| ||. .|+++++|++|+|++|.|+|. +| .++ .+ +|++|+|++|+++|.+|.. |.
T Consensus 194 ~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~-l~ 270 (636)
T 4eco_A 194 NITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTF-LK 270 (636)
T ss_dssp EEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTT-TT
T ss_pred CCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHH-Hh
Confidence 3445 885 799999999999999999994 55 555 44 7999999999999999965 99
Q ss_pred CCCCccEEEccCCc-Ccc-cCCccccCC------CCCCEEeccCCcCCCCCCC--C--CCCCCCEEEcccCCCccCCCcc
Q 008431 61 GMDQLKKVHLARNH-FSG-QIPKSLAGL------QKLLQLNLEGNSFQGKIPD--F--PLAHLTLLDLSYNQLVGRIPDT 128 (565)
Q Consensus 61 ~l~~L~~L~l~~N~-l~g-~~p~~~~~l------~~L~~L~l~~N~l~g~~p~--~--~~~~L~~l~ls~N~l~g~~p~~ 128 (565)
++++|+.|+|++|+ ++| .+|..++++ ++|+.|+|++|+++ .+|. . .+++|+.|++++|+++|.+| .
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~ 348 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-A 348 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-C
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-h
Confidence 99999999999998 999 899999887 99999999999999 6776 2 78899999999999999999 6
Q ss_pred ccCC---CCCcccCCC
Q 008431 129 LSNF---DATSFQGNK 141 (565)
Q Consensus 129 ~~~~---~~~~~~~n~ 141 (565)
+..+ ....+.+|.
T Consensus 349 ~~~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 349 FGSEIKLASLNLAYNQ 364 (636)
T ss_dssp CEEEEEESEEECCSSE
T ss_pred hCCCCCCCEEECCCCc
Confidence 6433 334455553
No 300
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.50 E-value=3.1e-14 Score=142.86 Aligned_cols=124 Identities=24% Similarity=0.210 Sum_probs=66.9
Q ss_pred CCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccC--Ccc-hhcCCCCccEEEccCCcCcc--cCC-ccccCCC
Q 008431 16 PGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEI--PSD-AFAGMDQLKKVHLARNHFSG--QIP-KSLAGLQ 87 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~i--p~~-~~~~l~~L~~L~l~~N~l~g--~~p-~~~~~l~ 87 (565)
++|++|+|++|+|++..| .+..+ +|+.|+|++|+++|.+ |+. .|.++++|++|+|++|+|++ .++ ..+.+++
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 666666666666666554 33332 5666666666665442 222 12566666666666666652 112 2334556
Q ss_pred CCCEEeccCCcCCCCCCCC---CCCCCCEEEcccCCCccCCCcccc-CCCCCcccCC
Q 008431 88 KLLQLNLEGNSFQGKIPDF---PLAHLTLLDLSYNQLVGRIPDTLS-NFDATSFQGN 140 (565)
Q Consensus 88 ~L~~L~l~~N~l~g~~p~~---~~~~L~~l~ls~N~l~g~~p~~~~-~~~~~~~~~n 140 (565)
+|+.|+|++|++++.+|.. .+++|+.|+|++|+|+ .+|..+. ++....+.+|
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N 284 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLSVLDLSYN 284 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEEEEECCSS
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCceEEECCCC
Confidence 6666666666666655321 3456666666666666 4554432 2333344444
No 301
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.50 E-value=4.7e-14 Score=150.06 Aligned_cols=126 Identities=23% Similarity=0.314 Sum_probs=78.4
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.+..++++.|.++++|+.|+|++|.+++..| .+..+ +|++|+|++|+|+ .+|+++|.++++|++|+|++|++++..|
T Consensus 43 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 121 (477)
T 2id5_A 43 RIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLD 121 (477)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECT
T ss_pred ccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCCh
Confidence 3444555566666666666666666666555 23332 5666666666666 5666666666666666766666666666
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
..|.++++|+.|+|++|.+++..|.. .+++|+.|+|++|++++..+..+
T Consensus 122 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 172 (477)
T 2id5_A 122 YMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL 172 (477)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHH
T ss_pred hHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHh
Confidence 66666666666666666666555542 45666666666666665444333
No 302
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.50 E-value=9.1e-14 Score=146.80 Aligned_cols=118 Identities=25% Similarity=0.268 Sum_probs=74.5
Q ss_pred ChhhcCCCCCCcEEEcccCcCccCCC-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccC
Q 008431 8 DVDTLSRLPGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAG 85 (565)
Q Consensus 8 ~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 85 (565)
++..|+.+++|+.|+|++|.+++..| .+.. .+|+.|+|++|+++ .+++..|.++++|++|+|++|++++..|..|.+
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccC-CcChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 34456666667777777776666555 3332 25666777766665 444445666666777777777666666666666
Q ss_pred CCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC
Q 008431 86 LQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 86 l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
+++|++|+|++|++++..+.. .+++|+.|++++|++++.+|
T Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 370 LPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 666777777777666544432 45666667777776666665
No 303
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.49 E-value=1.8e-14 Score=164.19 Aligned_cols=136 Identities=27% Similarity=0.347 Sum_probs=118.3
Q ss_pred cCCCCCCcEEEcccCcCccCCCc--c-cccccceeecccccccc----cCCcchhcCCCCccEEEccCCcCcccCCcccc
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPS--V-GKLTLRALYLSLNKFTG----EIPSDAFAGMDQLKKVHLARNHFSGQIPKSLA 84 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~--~-~~~~L~~L~Ls~N~l~g----~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 84 (565)
+.++++|+.|+|++|+|++..+. . ...+|+.|+|++|.+++ .++++.|.++++|+.|+|++|+|++.+|..|.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 55899999999999999976553 2 23479999999999973 23345689999999999999999999999999
Q ss_pred CCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCccccCCCCCcccCCCCCCCCC
Q 008431 85 GLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGNKGLCGKP 147 (565)
Q Consensus 85 ~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n~~~cg~p 147 (565)
++++|+.|+|++|+|++..|....++|+.|+|++|+|++.+|..+.++....+.+|+..|.++
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred chhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 999999999999999988777655899999999999999999999988888999999999654
No 304
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.49 E-value=7e-14 Score=144.74 Aligned_cols=137 Identities=19% Similarity=0.219 Sum_probs=84.1
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.++.+|+..|..+++|+.|+|++|.+++..+ .+..+ +|++|+|++|+++ .+|++.|.++++|++|+|++|+++...+
T Consensus 56 ~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 134 (390)
T 3o6n_A 56 TMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPR 134 (390)
T ss_dssp EESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred chhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEEECCCCccCcCCH
Confidence 3455666556667777777777777766555 33333 5777777777776 4555556677777777777777764444
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCCCCcccCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGN 140 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n 140 (565)
..|.++++|++|+|++|++++..|.. .+++|+.|++++|++++.....+.++....+.+|
T Consensus 135 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 135 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred HHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 44566777777777777776655542 4566777777777776544344444444444443
No 305
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.49 E-value=8.4e-14 Score=142.66 Aligned_cols=136 Identities=23% Similarity=0.167 Sum_probs=110.4
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCcc---cccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSV---GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
.+..||.. + .+.|+.|+|++|+|++..+.. ...+|+.|+|++|+|+ .+|+++|.++++|+.|+|++|+|++..
T Consensus 29 ~l~~iP~~-~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 104 (361)
T 2xot_A 29 QLPNVPQS-L--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHLHTLD 104 (361)
T ss_dssp CCSSCCSS-C--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CcCccCcc-C--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEECCCCcCCcCC
Confidence 34567753 3 245899999999999887743 3447999999999999 678778999999999999999999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccc------cCCCCCcccCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL------SNFDATSFQGNKG 142 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~------~~~~~~~~~~n~~ 142 (565)
+..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|+|++..+..| .++..+.+.+|..
T Consensus 105 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 105 EFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred HHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 889999999999999999999877763 68999999999999997555443 3344455666653
No 306
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.49 E-value=5.3e-14 Score=131.18 Aligned_cols=110 Identities=15% Similarity=0.224 Sum_probs=61.6
Q ss_pred cCCCCCCcEEEcccCcCccCCCccc-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCC
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPSVG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLL 90 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 90 (565)
+..+++|+.|+|++|.++.. +.+. ..+|+.|+|++|++++..|.. |..+++|+.|+|++|++++..|..|+.+++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~-l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPN-LSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCC-CTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChh-hcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 55566666666666655432 2222 224666666666666444443 56666666666666666655566666666666
Q ss_pred EEeccCCcCCCCCCCC-CCCCCCEEEcccCCCcc
Q 008431 91 QLNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 91 ~L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g 123 (565)
.|+|++|++.+.+|.. .+++|+.|++++|++++
T Consensus 140 ~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 140 SIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp EEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCC
T ss_pred EEEccCCCCccccHhhcCCCCCCEEECCCCCCcC
Confidence 6666666522233322 45566666666666654
No 307
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=1.3e-13 Score=125.84 Aligned_cols=104 Identities=19% Similarity=0.229 Sum_probs=85.0
Q ss_pred CcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCC
Q 008431 18 LRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGN 97 (565)
Q Consensus 18 L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 97 (565)
-+.+++++|.|+..++.+. ..|+.|+|++|+|+ .++++.|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~-~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP-TDKQRLWLNNNQIT-KLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC-TTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC-CCCcEEEeCCCCcc-ccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4688999999975444443 57899999999998 565566899999999999999999877777889999999999999
Q ss_pred cCCCCCCC-C-CCCCCCEEEcccCCCcc
Q 008431 98 SFQGKIPD-F-PLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 98 ~l~g~~p~-~-~~~~L~~l~ls~N~l~g 123 (565)
+|++..+. + .+++|+.|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99977665 2 57889999999998864
No 308
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.48 E-value=6.4e-14 Score=149.07 Aligned_cols=142 Identities=23% Similarity=0.242 Sum_probs=107.5
Q ss_pred ccccChhhcCCCCCCcEEEcccCcCccCCCc--------------------------ccccccceeecccccccccCCcc
Q 008431 4 MGMIDVDTLSRLPGLRSLSFINNSFDGPMPS--------------------------VGKLTLRALYLSLNKFTGEIPSD 57 (565)
Q Consensus 4 ~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~--------------------------~~~~~L~~L~Ls~N~l~g~ip~~ 57 (565)
+..+++..|..+++|+.|+|++|.+.+..+. ....+|+.|+|++|+|+ .+|..
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~ 242 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYL 242 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHH
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHH
Confidence 4455555566666666666666666543331 11226788888888888 78877
Q ss_pred hhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCcccc---CC
Q 008431 58 AFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLS---NF 132 (565)
Q Consensus 58 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~---~~ 132 (565)
.|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|.. .+++|+.|+|++|+|++..+..|. ++
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 7899999999999999999888888999999999999999999887764 678999999999999987766654 44
Q ss_pred CCCcccCCCCCCCC
Q 008431 133 DATSFQGNKGLCGK 146 (565)
Q Consensus 133 ~~~~~~~n~~~cg~ 146 (565)
....+.+|+..|.+
T Consensus 323 ~~L~l~~N~l~c~c 336 (477)
T 2id5_A 323 ETLILDSNPLACDC 336 (477)
T ss_dssp CEEECCSSCEECSG
T ss_pred CEEEccCCCccCcc
Confidence 55678888888764
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.48 E-value=1.6e-13 Score=144.97 Aligned_cols=120 Identities=26% Similarity=0.270 Sum_probs=76.2
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..++++.|.++++|+.|+|++|.|++..| .+.. .+|++|+|++|+|+ .+|++.|.++++|++|+|++|+|+...
T Consensus 85 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~ 163 (452)
T 3zyi_A 85 NNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIP 163 (452)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEEC
T ss_pred CcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeC
Confidence 34455666778888888888888888887665 3333 36888888888887 677777777888888888888777655
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC---CCCCCCEEEcccCCCc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF---PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~ls~N~l~ 122 (565)
+..|.++++|+.|+|++|+..+.++.. .+.+|+.|+|++|+|+
T Consensus 164 ~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 164 SYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred HhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 555555555555555553332233321 3444444444444444
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=143.73 Aligned_cols=120 Identities=24% Similarity=0.288 Sum_probs=69.4
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|.++++|+.|+|++|.|++..+ .+.. .+|+.|+|++|+|+ .+|++.|.++++|+.|+|++|+|+...
T Consensus 74 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~ 152 (440)
T 3zyj_A 74 NQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIP 152 (440)
T ss_dssp CCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEEC
T ss_pred CcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccC
Confidence 34455565667777777777777777766554 2322 35777777777776 566666666777777777777666555
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC---CCCCCCEEEcccCCCc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF---PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~---~~~~L~~l~ls~N~l~ 122 (565)
+..|.++++|+.|+|++|+..+.++.. .+++|+.|+|++|+|+
T Consensus 153 ~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 153 SYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp TTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred HHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 555555555555555553333333321 3444444444444444
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.47 E-value=4.1e-14 Score=150.84 Aligned_cols=138 Identities=25% Similarity=0.196 Sum_probs=84.4
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceee-------------------------------------
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALY------------------------------------- 44 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~------------------------------------- 44 (565)
|.+..++++.|+.+++|+.|+|++|.|++.+|.....+|+.|+
T Consensus 44 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~ 123 (487)
T 3oja_A 44 NPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKK 123 (487)
T ss_dssp SCCCCCCGGGGTTCTTCCEEECTTSCCEEEEECTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCE
T ss_pred CcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcccccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCC
Confidence 3455677778888888888888888888655521122344444
Q ss_pred ---cccccccccCCcchhcCCCCccEEEccCCcCcccCCcccc-CCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCC
Q 008431 45 ---LSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLA-GLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQ 120 (565)
Q Consensus 45 ---Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~ 120 (565)
|++|+|++. ++..|+++++|+.|+|++|.|++.+|..|. ++++|+.|+|++|.|++..+...+++|+.|+|++|+
T Consensus 124 ~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~ 202 (487)
T 3oja_A 124 NIYLANNKITML-RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNK 202 (487)
T ss_dssp EEECCSSCCCSG-GGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSC
T ss_pred EEECCCCCCCCC-CchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCC
Confidence 444444422 223356666777777777777766666665 567777777777777766444456777777777777
Q ss_pred CccCCCcccc---CCCCCcccCCC
Q 008431 121 LVGRIPDTLS---NFDATSFQGNK 141 (565)
Q Consensus 121 l~g~~p~~~~---~~~~~~~~~n~ 141 (565)
|++..|. +. ++....+.+|.
T Consensus 203 l~~~~~~-~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 203 LAFMGPE-FQSAAGVTWISLRNNK 225 (487)
T ss_dssp CCEECGG-GGGGTTCSEEECTTSC
T ss_pred CCCCCHh-HcCCCCccEEEecCCc
Confidence 7765443 33 33334455553
No 312
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.47 E-value=1.3e-13 Score=153.25 Aligned_cols=141 Identities=18% Similarity=0.183 Sum_probs=109.9
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccC--------CcchhcCCCCccEEEccCCc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEI--------PSDAFAGMDQLKKVHLARNH 74 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~i--------p~~~~~~l~~L~~L~l~~N~ 74 (565)
+.+| ..|..+++|+.|+|++|+|++.+|. +.. .+|+.|+|++|++++ + |...|.++++|+.|+|++|+
T Consensus 470 ~~~p-~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 547 (680)
T 1ziw_A 470 DSSP-SPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR-LWKHANPGGPIYFLKGLSHLHILNLESNG 547 (680)
T ss_dssp TCSS-CTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGG-GGSTTSTTSCCCTTTTCTTCCEEECCSSC
T ss_pred ccCC-cccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccc-cchhhccCCcchhhcCCCCCCEEECCCCC
Confidence 3444 4678888888888888888877664 333 368899999998884 3 22237888899999999999
Q ss_pred CcccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCcc----ccCCCCCcccCCCCCCCCC
Q 008431 75 FSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDT----LSNFDATSFQGNKGLCGKP 147 (565)
Q Consensus 75 l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~----~~~~~~~~~~~n~~~cg~p 147 (565)
|+...+..|.++++|+.|+|++|++++..+.. .+++|+.|+|++|+|++..|.. +.++....+.+|+..|.++
T Consensus 548 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 548 FDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 98555557899999999999999999766653 6789999999999999877764 4567777889999999865
No 313
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.47 E-value=9.7e-14 Score=141.69 Aligned_cols=127 Identities=23% Similarity=0.309 Sum_probs=88.6
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
....||.+ +. ++|+.|+|++|+|++..+ .+... +|+.|+|++|+++ .++++.|.++++|++|+|++|++++..+
T Consensus 42 ~l~~iP~~-~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 117 (353)
T 2z80_A 42 SLNSIPSG-LT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSS 117 (353)
T ss_dssp TCSSCCTT-CC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCSSCCH
T ss_pred Cccccccc-cc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC-ccCHhhcCCCCCCCEEECCCCcCCcCCH
Confidence 34566643 22 478888888888887665 34333 6888888888888 4555568888888888888888886555
Q ss_pred ccccCCCCCCEEeccCCcCCCCCC-C-C-CCCCCCEEEcccC-CCccCCCccccCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIP-D-F-PLAHLTLLDLSYN-QLVGRIPDTLSNFD 133 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p-~-~-~~~~L~~l~ls~N-~l~g~~p~~~~~~~ 133 (565)
..|+++++|++|+|++|++++..+ . + .+++|+.|++++| .+++..|..+.+++
T Consensus 118 ~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 174 (353)
T 2z80_A 118 SWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT 174 (353)
T ss_dssp HHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCC
Confidence 557888888888888888885444 1 2 5778888888888 46655566665544
No 314
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.47 E-value=2.8e-13 Score=136.87 Aligned_cols=123 Identities=24% Similarity=0.288 Sum_probs=63.8
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCcc--CCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDG--PMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSG 77 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~--~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g 77 (565)
|.+..+++..|.++++|+.|+|++|.+.. ..+ .+..+ +|+.|+|++|+++ .+|...+ ++|+.|+|++|++++
T Consensus 131 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~ 206 (330)
T 1xku_A 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITK 206 (330)
T ss_dssp SCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCE
T ss_pred CcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCc
Confidence 34455666667777777777777777752 333 22222 4555555555555 4444321 445555555555555
Q ss_pred cCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 78 QIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 78 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
..|..|.++++|+.|+|++|++++..+.. .+++|+.|++++|+|+ .+|..+
T Consensus 207 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 207 VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 44555555555555555555555444321 3445555555555554 344433
No 315
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.47 E-value=1.1e-13 Score=150.38 Aligned_cols=142 Identities=20% Similarity=0.250 Sum_probs=106.2
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCC--cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCc-ccCC
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMP--SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFS-GQIP 80 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p--~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~-g~~p 80 (565)
..+++. +..+++|+.|+|++|.+.+..| .+.. .+|+.|+|++|++++.+| ..|.++++|+.|+|++|.++ +.+|
T Consensus 386 ~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~p 463 (570)
T 2z63_A 386 ITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN-GIFNGLSSLEVLKMAGNSFQENFLP 463 (570)
T ss_dssp EEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCT-TTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred cccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccch-hhhhcCCcCcEEECcCCcCccccch
Confidence 345543 6777788888888887777655 2322 368888888888885444 45888888888888888887 5788
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCC---CCcccCCCCCCCCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFD---ATSFQGNKGLCGKPL 148 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~cg~p~ 148 (565)
..|..+++|+.|+|++|++++..|.. .+++|+.|++++|++++..|..+.+++ ...+.+|+..|.+|.
T Consensus 464 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 464 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 88888888888888888888876753 578888888888888887777665444 456788888887654
No 316
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.47 E-value=8.5e-14 Score=133.89 Aligned_cols=135 Identities=13% Similarity=0.167 Sum_probs=110.1
Q ss_pred ccccChhhcCCCCCCcEEEccc-CcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCcc---EEEccCC-cCc
Q 008431 4 MGMIDVDTLSRLPGLRSLSFIN-NSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLK---KVHLARN-HFS 76 (565)
Q Consensus 4 ~g~i~~~~~~~l~~L~~L~l~~-N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~---~L~l~~N-~l~ 76 (565)
++.|++..|.++++|+.|+|++ |.|++..+. +.. .+|+.|+|++|+|+ .+|. |..+++|+ .|+|++| +++
T Consensus 68 l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~--~~~l~~L~~L~~L~l~~N~~l~ 144 (239)
T 2xwt_C 68 LQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD--LTKVYSTDIFFILEITDNPYMT 144 (239)
T ss_dssp CCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC--CTTCCBCCSEEEEEEESCTTCC
T ss_pred cceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc--cccccccccccEEECCCCcchh
Confidence 6788888899999999999998 999987763 333 47999999999999 4886 88888888 9999999 999
Q ss_pred ccCCccccCCCCCC-EEeccCCcCCCCCCCC--CCCCCCEEEcccCC-CccCCCccccCC-C---CCcccCCCC
Q 008431 77 GQIPKSLAGLQKLL-QLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQ-LVGRIPDTLSNF-D---ATSFQGNKG 142 (565)
Q Consensus 77 g~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~-l~g~~p~~~~~~-~---~~~~~~n~~ 142 (565)
+..+..|.++++|+ .|+|++|+++ .+|.. ...+|+.|++++|+ +++..+..|..+ + ...+.+|..
T Consensus 145 ~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l 217 (239)
T 2xwt_C 145 SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217 (239)
T ss_dssp EECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCC
T ss_pred hcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcc
Confidence 87778899999999 9999999999 45542 34789999999995 987767766554 3 345666654
No 317
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.46 E-value=7.9e-14 Score=139.31 Aligned_cols=144 Identities=19% Similarity=0.234 Sum_probs=112.9
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCcc-CCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDG-PMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~-~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
.+..+++..|..+++|+.|+|++|.+++ .+| .+... +|+.|+|++|+|++ +++..|..+++|+.|+|++|++++..
T Consensus 137 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~ 215 (306)
T 2z66_A 137 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ-LSPTAFNSLSSLQVLNMSHNNFFSLD 215 (306)
T ss_dssp CCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred cCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCC-cCHHHhcCCCCCCEEECCCCccCccC
Confidence 3445566789999999999999999987 445 34443 79999999999995 55556999999999999999999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CC-CCCCEEEcccCCCccCCC-----ccccCCCCCcccCCCCCCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PL-AHLTLLDLSYNQLVGRIP-----DTLSNFDATSFQGNKGLCGKP 147 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~-~~L~~l~ls~N~l~g~~p-----~~~~~~~~~~~~~n~~~cg~p 147 (565)
+..|..+++|+.|+|++|++++..|.. .+ ++|+.|+|++|++++..+ .++..........+...|..|
T Consensus 216 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 216 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp SGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred hhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 888999999999999999999988864 44 589999999999987643 233333333334445556544
No 318
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.46 E-value=1.8e-13 Score=149.76 Aligned_cols=100 Identities=17% Similarity=0.224 Sum_probs=89.3
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|+.+++|+.|+|++|.|++.+|. ++.+ +|++|+|++|.|+ .+|+.+|.++++|+.|+|++|.|++..
T Consensus 85 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (597)
T 3oja_B 85 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIE 163 (597)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCC
Confidence 445667777899999999999999999998884 3444 7999999999999 789888999999999999999999999
Q ss_pred CccccCCCCCCEEeccCCcCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGK 102 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~ 102 (565)
|..|+++++|+.|+|++|.+++.
T Consensus 164 ~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 164 DDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp TTTTTTCTTCCEEECTTSCCSBC
T ss_pred hhhhhcCCcCcEEECcCCCCCCc
Confidence 99999999999999999999864
No 319
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.46 E-value=1.2e-13 Score=151.53 Aligned_cols=128 Identities=23% Similarity=0.258 Sum_probs=80.4
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCCc--ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcc---c
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPS--VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSG---Q 78 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~--~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g---~ 78 (565)
..+++..|..+++|+.|+|++|.+++..|. +.. .+|+.|+|++|.+++. ++..|.++++|++|+|++|++++ .
T Consensus 389 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~ 467 (606)
T 3t6q_A 389 LSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDIS-SEQLFDGLPALQHLNLQGNHFPKGNIQ 467 (606)
T ss_dssp EEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTT-CTTTTTTCTTCCEEECTTCBCGGGEEC
T ss_pred CcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCc-CHHHHhCCCCCCEEECCCCCCCccccc
Confidence 344455677777777777777777765542 222 2577777777777643 33446667777777777777665 2
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccccCCC
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFD 133 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~ 133 (565)
.+..+..+++|+.|+|++|++++..|.. .+++|+.|+|++|++++..|..+.++.
T Consensus 468 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 468 KTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp SSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred cchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccc
Confidence 2345666677777777777776665543 456667777777776666666655444
No 320
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.45 E-value=5.5e-14 Score=156.93 Aligned_cols=121 Identities=22% Similarity=0.308 Sum_probs=101.1
Q ss_pred cChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccC
Q 008431 7 IDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAG 85 (565)
Q Consensus 7 i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 85 (565)
++++.|..++.|+.|+|++|.|....+.+..+ .|+.|+|++|+|+ .||.. |.+|++|+.|+|++|+|+ .+|..|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAE-IKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGG-GGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChh-hhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 55678999999999999999999554455444 7999999999999 89976 899999999999999999 78999999
Q ss_pred CCCCCEEeccCCcCCCCCCC-C-CCCCCCEEEcccCCCccCCCccccC
Q 008431 86 LQKLLQLNLEGNSFQGKIPD-F-PLAHLTLLDLSYNQLVGRIPDTLSN 131 (565)
Q Consensus 86 l~~L~~L~l~~N~l~g~~p~-~-~~~~L~~l~ls~N~l~g~~p~~~~~ 131 (565)
|++|++|+|++|.|+ .+|. + .+++|+.|+|++|+|+|.+|..+..
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 999999999999998 5555 3 6899999999999999998887643
No 321
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.45 E-value=2e-13 Score=149.74 Aligned_cols=123 Identities=21% Similarity=0.317 Sum_probs=57.7
Q ss_pred ccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
.+++..|+++++|++|+|++|.+++..|. +..+ +|++|+|++|+++ .++++.|.++++|++|+|++|.+++..|..|
T Consensus 46 ~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~ 124 (606)
T 3vq2_A 46 ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ-SFSPGSFSGLTSLENLVAVETKLASLESFPI 124 (606)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-CCCTTSSTTCTTCCEEECTTSCCCCSSSSCC
T ss_pred EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccc-ccChhhcCCcccCCEEEccCCcccccccccc
Confidence 34444455555555555555555544442 2222 3555555555554 2322335555555555555555554444445
Q ss_pred cCCCCCCEEeccCCcCCC-CCCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 84 AGLQKLLQLNLEGNSFQG-KIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g-~~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
+++++|++|+|++|++++ .+|.. .+++|+.|++++|++++..|..+
T Consensus 125 ~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 125 GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 555555555555555543 22331 34455555555555554444433
No 322
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=4.5e-14 Score=159.41 Aligned_cols=131 Identities=20% Similarity=0.260 Sum_probs=108.1
Q ss_pred cChhhcCCCCCCcEEEcccCcCcc-----------------CCC-ccc--cc-ccceeecccccccccCCcchhcCCCCc
Q 008431 7 IDVDTLSRLPGLRSLSFINNSFDG-----------------PMP-SVG--KL-TLRALYLSLNKFTGEIPSDAFAGMDQL 65 (565)
Q Consensus 7 i~~~~~~~l~~L~~L~l~~N~l~~-----------------~~p-~~~--~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L 65 (565)
||. .|++|++|+.|+|++|+|+| .+| .++ .+ +|+.|+|++|++.|.+|.. |.++++|
T Consensus 440 IP~-~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~-l~~L~~L 517 (876)
T 4ecn_A 440 ISK-AIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDF-LYDLPEL 517 (876)
T ss_dssp ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGG-GGGCSSC
T ss_pred hhH-HHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHH-HhCCCCC
Confidence 885 79999999999999999999 255 554 44 7999999999999999965 8999999
Q ss_pred cEEEccCCc-Ccc-cCCccccCCC-------CCCEEeccCCcCCCCCCC--C--CCCCCCEEEcccCCCccCCCccccCC
Q 008431 66 KKVHLARNH-FSG-QIPKSLAGLQ-------KLLQLNLEGNSFQGKIPD--F--PLAHLTLLDLSYNQLVGRIPDTLSNF 132 (565)
Q Consensus 66 ~~L~l~~N~-l~g-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~--~--~~~~L~~l~ls~N~l~g~~p~~~~~~ 132 (565)
+.|+|++|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. . .+++|+.|+|++|+|+ .+| .|.++
T Consensus 518 ~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L 594 (876)
T 4ecn_A 518 QSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTN 594 (876)
T ss_dssp CEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTT
T ss_pred CEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCC
Confidence 999999998 998 8898776665 9999999999999 6776 2 7889999999999998 788 66554
Q ss_pred CC---CcccCCCC
Q 008431 133 DA---TSFQGNKG 142 (565)
Q Consensus 133 ~~---~~~~~n~~ 142 (565)
+. ..+.+|..
T Consensus 595 ~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 595 VKLTDLKLDYNQI 607 (876)
T ss_dssp SEESEEECCSSCC
T ss_pred CcceEEECcCCcc
Confidence 43 34556643
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.45 E-value=2.7e-13 Score=147.42 Aligned_cols=134 Identities=22% Similarity=0.287 Sum_probs=76.0
Q ss_pred hhcCCCCCCcEEEcccCcCccCC--C-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccC
Q 008431 10 DTLSRLPGLRSLSFINNSFDGPM--P-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAG 85 (565)
Q Consensus 10 ~~~~~l~~L~~L~l~~N~l~~~~--p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 85 (565)
..|+++++|+.|+|++|+|++.. | .+.. .+|+.|+|++|++++.+|.+.|.++++|+.|+|++|++++.+|..+.
T Consensus 371 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~- 449 (562)
T 3a79_B 371 QGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP- 449 (562)
T ss_dssp TTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-
T ss_pred hhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-
Confidence 35566666666666666666422 2 1222 24666666666666546665566666666666666666655555443
Q ss_pred CCCCCEEeccCCcCCCCCCCC-CCCCCCEEEcccCCCccCCCcc-ccCC---CCCcccCCCCCCCC
Q 008431 86 LQKLLQLNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVGRIPDT-LSNF---DATSFQGNKGLCGK 146 (565)
Q Consensus 86 l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~~p~~-~~~~---~~~~~~~n~~~cg~ 146 (565)
++|+.|+|++|+++...+.. .+++|+.|+|++|+|++ +|.. +..+ ....+.+|+..|.+
T Consensus 450 -~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 450 -PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp -TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred -CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 56666666666666322222 45667777777777763 4433 4333 33456667666654
No 324
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.45 E-value=1.6e-13 Score=150.41 Aligned_cols=131 Identities=22% Similarity=0.237 Sum_probs=99.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|+++++|++|+|++|.+++..|. +..+ +|++|+|++|++++ +++..|.++++|++|+|++|++++..
T Consensus 43 n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~l~ 121 (606)
T 3t6q_A 43 NVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIF-MAETALSGPKALKHLFFIQTGISSID 121 (606)
T ss_dssp CCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSE-ECTTTTSSCTTCCEEECTTSCCSCGG
T ss_pred CccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccc-cChhhhcccccccEeeccccCcccCC
Confidence 445566667788888888888888888877663 4433 68888888888884 44445888888888888888888766
Q ss_pred CccccCCCCCCEEeccCCcCCCC-CCCC-CCCCCCEEEcccCCCccCCCccccCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGK-IPDF-PLAHLTLLDLSYNQLVGRIPDTLSNFD 133 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~-~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~~ 133 (565)
|..|+++++|++|+|++|++++. +|.. .+++|+.|++++|++++..|..+..+.
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 177 (606)
T 3t6q_A 122 FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQ 177 (606)
T ss_dssp GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTT
T ss_pred cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhc
Confidence 77888888888888888888874 3443 578888888888888877776665544
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.44 E-value=7.1e-14 Score=149.02 Aligned_cols=129 Identities=26% Similarity=0.277 Sum_probs=106.1
Q ss_pred CCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCE
Q 008431 14 RLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQ 91 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 91 (565)
.+++|+.|+|++|.|++..| .++.+ +|+.|+|++|+|++.+|...+..+++|+.|+|++|.|++..+ +..+++|+.
T Consensus 118 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~ 195 (487)
T 3oja_A 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKT 195 (487)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCE
T ss_pred ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCE
Confidence 46889999999999998877 44443 799999999999987777644589999999999999997633 446999999
Q ss_pred EeccCCcCCCCCCCC-CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCC
Q 008431 92 LNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCG 145 (565)
Q Consensus 92 L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg 145 (565)
|+|++|+|++.+|.+ .+++|+.|+|++|+|++ +|..+.. +....+.+|+..|+
T Consensus 196 L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 196 LDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp EECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred EECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 999999999877765 67899999999999997 5665544 44556788887775
No 326
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.44 E-value=2.1e-13 Score=123.59 Aligned_cols=117 Identities=21% Similarity=0.275 Sum_probs=96.4
Q ss_pred CCCCCcEEEcccCcCc-cCCCcc-ccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCC
Q 008431 14 RLPGLRSLSFINNSFD-GPMPSV-GKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLL 90 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~-~~~p~~-~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 90 (565)
..++|+.|+|++|.++ +.+|.. ... +|+.|+|++|.|++ + ..|..+++|++|+|++|++++.+|..+.++++|+
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 4578999999999998 677743 333 79999999999994 5 4489999999999999999988899888899999
Q ss_pred EEeccCCcCCCCC--CCC-CCCCCCEEEcccCCCccCCC---ccccCCC
Q 008431 91 QLNLEGNSFQGKI--PDF-PLAHLTLLDLSYNQLVGRIP---DTLSNFD 133 (565)
Q Consensus 91 ~L~l~~N~l~g~~--p~~-~~~~L~~l~ls~N~l~g~~p---~~~~~~~ 133 (565)
.|+|++|++++.. +.. .+++|+.|++++|++++..+ ..+..++
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~ 147 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLP 147 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCS
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCc
Confidence 9999999999754 232 68899999999999997665 3444444
No 327
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.44 E-value=1.3e-13 Score=125.00 Aligned_cols=116 Identities=24% Similarity=0.201 Sum_probs=98.7
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC-Ccc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI-PKS 82 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~-p~~ 82 (565)
+.+|. .+..+++|+.|+|++|.|++. +.+..+ +|+.|+|++|++++.+| ..+..+++|+.|+|++|+|++.. +..
T Consensus 39 ~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 115 (168)
T 2ell_A 39 GKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLD-MLAEKLPNLTHLNLSGNKLKDISTLEP 115 (168)
T ss_dssp TBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCC-HHHHHCTTCCEEECBSSSCCSSGGGGG
T ss_pred hhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHH-HHHhhCCCCCEEeccCCccCcchhHHH
Confidence 47875 588999999999999999987 555444 79999999999996565 45788999999999999999642 278
Q ss_pred ccCCCCCCEEeccCCcCCCCCC----C-CCCCCCCEEEcccCCCcc
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIP----D-FPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p----~-~~~~~L~~l~ls~N~l~g 123 (565)
|..+++|+.|+|++|.+++..+ . ..+++|+.|++++|.+..
T Consensus 116 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 116 LKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp GSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred HhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999999999999998766 2 268999999999999863
No 328
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.44 E-value=1.9e-13 Score=152.03 Aligned_cols=125 Identities=22% Similarity=0.273 Sum_probs=82.3
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.+..+++..|+++++|++|+|++|.+++..|. +.. .+|+.|+|++|+|+ .+|+++|.++++|++|+|++|++++..|
T Consensus 36 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 114 (680)
T 1ziw_A 36 QLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKN 114 (680)
T ss_dssp CCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCS
T ss_pred CCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccCh
Confidence 34455655666777777777777777666553 222 25777777777776 5666667777777777777777776666
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCcc
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDT 128 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~ 128 (565)
..|+++++|++|+|++|.+++..|.. .+++|+.|++++|++++..|..
T Consensus 115 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 115 NPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred hHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHH
Confidence 66777777777777777777665553 5667777777777776655543
No 329
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.44 E-value=1.9e-13 Score=147.92 Aligned_cols=110 Identities=25% Similarity=0.354 Sum_probs=64.1
Q ss_pred CCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEe
Q 008431 16 PGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLN 93 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 93 (565)
++|+.|+|++|.+++..| .+..+ +|++|+|++|+++ .+++++|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRIN-TIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcC-ccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEE
Confidence 456666666666666554 23332 4666666666666 34444466666666666666666665555566666666666
Q ss_pred ccCCcCCCC-CCC-C-CCCCCCEEEcccCCCccCCC
Q 008431 94 LEGNSFQGK-IPD-F-PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 94 l~~N~l~g~-~p~-~-~~~~L~~l~ls~N~l~g~~p 126 (565)
|++|++++. .|. + .+++|+.|++++|++.+.+|
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR 140 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccC
Confidence 666666642 222 1 45566666666666433333
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.43 E-value=2.1e-13 Score=131.18 Aligned_cols=124 Identities=14% Similarity=0.292 Sum_probs=95.5
Q ss_pred CCCcEEEcccCcCccCCC-cccc-cccceeeccccc-ccccCCcchhcCCCCccEEEccC-CcCcccCCccccCCCCCCE
Q 008431 16 PGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNK-FTGEIPSDAFAGMDQLKKVHLAR-NHFSGQIPKSLAGLQKLLQ 91 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~-l~g~ip~~~~~~l~~L~~L~l~~-N~l~g~~p~~~~~l~~L~~ 91 (565)
++|+.|+|++|+|++..+ .+.. .+|+.|+|++|+ ++ .+|+.+|.++++|++|+|++ |+|++..|..|.++++|+.
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 378889999999887776 3433 368899999997 77 67877788889999999988 8888777788888899999
Q ss_pred EeccCCcCCCCCCCC-CCCCCC---EEEcccC-CCccCCCccccCCC----CCcccCCC
Q 008431 92 LNLEGNSFQGKIPDF-PLAHLT---LLDLSYN-QLVGRIPDTLSNFD----ATSFQGNK 141 (565)
Q Consensus 92 L~l~~N~l~g~~p~~-~~~~L~---~l~ls~N-~l~g~~p~~~~~~~----~~~~~~n~ 141 (565)
|+|++|++++ +|.+ .+.+|+ .|++++| ++++..+..|.++. ...+.+|.
T Consensus 110 L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 110 LGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred EeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 9999998887 4543 566776 8999998 88877666666554 34455654
No 331
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.43 E-value=4.5e-13 Score=147.74 Aligned_cols=86 Identities=23% Similarity=0.342 Sum_probs=41.5
Q ss_pred ccceeecccccccccCCcchh-cCCCCccEEEccCCcCcccCCccccCCCCCCEEec------cCCcCCCCCCCC--CCC
Q 008431 39 TLRALYLSLNKFTGEIPSDAF-AGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNL------EGNSFQGKIPDF--PLA 109 (565)
Q Consensus 39 ~L~~L~Ls~N~l~g~ip~~~~-~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l------~~N~l~g~~p~~--~~~ 109 (565)
+|+.|+|++|+|+ .+|...+ ..+++|+.|+|++|+|++ +|..+.++++|+.|+| ++|++.+.+|.. .++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 4555555555555 4554322 245555555555555554 4555555555555555 334444444432 344
Q ss_pred CCCEEEcccCCCccCCCc
Q 008431 110 HLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 110 ~L~~l~ls~N~l~g~~p~ 127 (565)
+|+.|+|++|+| +.+|.
T Consensus 567 ~L~~L~Ls~N~l-~~ip~ 583 (636)
T 4eco_A 567 SLTQLQIGSNDI-RKVNE 583 (636)
T ss_dssp SCCEEECCSSCC-CBCCS
T ss_pred CCCEEECCCCcC-CccCH
Confidence 555555555555 34443
No 332
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.43 E-value=9.8e-14 Score=123.08 Aligned_cols=110 Identities=23% Similarity=0.267 Sum_probs=93.9
Q ss_pred CCCCCcEEEcccCcCc-cCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCC
Q 008431 14 RLPGLRSLSFINNSFD-GPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLL 90 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~-~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 90 (565)
..++|+.|++++|.++ +.+|. +... +|+.|+|++|+|++ + ..|..+++|+.|+|++|++++.+|..+..+++|+
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 91 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS-I--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLT 91 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCC-C--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCC
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCC-c--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCC
Confidence 4578999999999998 66774 3333 79999999999994 4 4589999999999999999988999999999999
Q ss_pred EEeccCCcCCCCC--CC-CCCCCCCEEEcccCCCccCCC
Q 008431 91 QLNLEGNSFQGKI--PD-FPLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 91 ~L~l~~N~l~g~~--p~-~~~~~L~~l~ls~N~l~g~~p 126 (565)
.|+|++|++++.. +. ..+++|+.|++++|++++..+
T Consensus 92 ~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 92 HLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp EEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred EEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 9999999999742 22 268899999999999998766
No 333
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.43 E-value=1.9e-13 Score=147.01 Aligned_cols=114 Identities=25% Similarity=0.378 Sum_probs=67.3
Q ss_pred CCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccc--cCCcchhcCCCCccEEEccCCcCcccCCc-cccCCC
Q 008431 13 SRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTG--EIPSDAFAGMDQLKKVHLARNHFSGQIPK-SLAGLQ 87 (565)
Q Consensus 13 ~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~l~~N~l~g~~p~-~~~~l~ 87 (565)
..+++|+.|+|++|.+++.+| .+..+ +|+.|+|++|++++ .+|. .|.++++|+.|+|++|.+++.+|. .|..++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAE-MTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHH-HHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchH-HHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 566667777777777766554 33322 56666666666663 2332 366666666666666666664444 356666
Q ss_pred CCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCcc
Q 008431 88 KLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDT 128 (565)
Q Consensus 88 ~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~ 128 (565)
+|+.|+|++|++++.+|....++|+.|++++|+|+ .+|..
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~ 439 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQ 439 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGG
T ss_pred cCCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchh
Confidence 66666666666665555432255666666666665 44543
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.42 E-value=1.1e-13 Score=138.94 Aligned_cols=107 Identities=21% Similarity=0.253 Sum_probs=56.0
Q ss_pred CCCCCcEEEcccCcCccCCCc-c--c-ccccceeecccccccccCCcchhcCC-----CCccEEEccCCcCcccCCcccc
Q 008431 14 RLPGLRSLSFINNSFDGPMPS-V--G-KLTLRALYLSLNKFTGEIPSDAFAGM-----DQLKKVHLARNHFSGQIPKSLA 84 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~~~~p~-~--~-~~~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~l~~N~l~g~~p~~~~ 84 (565)
++++|++|+|++|.+++.+|. + . ..+|+.|+|++|+|++. |. .|..+ ++|++|+|++|++++..|..|+
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~ 170 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR 170 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhc
Confidence 455566666666666555542 1 2 22455666666665533 42 24444 5556666666666555555555
Q ss_pred CCCCCCEEeccCCcCCCCCC---C---CCCCCCCEEEcccCCCc
Q 008431 85 GLQKLLQLNLEGNSFQGKIP---D---FPLAHLTLLDLSYNQLV 122 (565)
Q Consensus 85 ~l~~L~~L~l~~N~l~g~~p---~---~~~~~L~~l~ls~N~l~ 122 (565)
++++|++|+|++|+++|.++ . ..+++|+.|++++|+|+
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 55566666666665554311 1 13455555555555554
No 335
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.42 E-value=5.4e-13 Score=134.91 Aligned_cols=123 Identities=27% Similarity=0.329 Sum_probs=71.6
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCcc--CCC-cccccccceeecccccccccCCcchhcCCCCccEEEccCCcCccc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDG--PMP-SVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ 78 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~--~~p-~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~ 78 (565)
|.++.+++..|..+++|+.|+|++|.++. ..| .+...+|+.|+|++|+++ .+|...+ ++|+.|+|++|.+++.
T Consensus 133 n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~ 208 (332)
T 2ft3_A 133 NRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDLP---ETLNELHLDHNKIQAI 208 (332)
T ss_dssp SCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCS-SCCSSSC---SSCSCCBCCSSCCCCC
T ss_pred CccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCC-ccCcccc---CCCCEEECCCCcCCcc
Confidence 44567777778889999999999998863 444 233335566666666655 3554322 4555555555555555
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCCccc
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
.|..|.++++|+.|+|++|++++..+.. .+++|+.|++++|+|+ .+|..+
T Consensus 209 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 209 ELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp CTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred CHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 5555555555555555555555544432 3455555555555555 444433
No 336
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.41 E-value=1.4e-13 Score=122.16 Aligned_cols=111 Identities=24% Similarity=0.240 Sum_probs=94.4
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCccc-CCcc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ-IPKS 82 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~-~p~~ 82 (565)
+.+|. .+..+++|+.|+|++|.|++. +.+... +|+.|+|++|++++.+|. .+..+++|++|+|++|++++. .|..
T Consensus 32 ~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~ls~N~i~~~~~~~~ 108 (149)
T 2je0_A 32 GKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEV-LAEKCPNLTHLNLSGNKIKDLSTIEP 108 (149)
T ss_dssp TBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHH-HHHHCTTCCEEECTTSCCCSHHHHGG
T ss_pred hHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHH-HhhhCCCCCEEECCCCcCCChHHHHH
Confidence 47875 789999999999999999987 555444 799999999999966664 578899999999999999974 4588
Q ss_pred ccCCCCCCEEeccCCcCCCCCC---C--CCCCCCCEEEccc
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIP---D--FPLAHLTLLDLSY 118 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p---~--~~~~~L~~l~ls~ 118 (565)
+..+++|+.|++++|.+++..+ . ..+++|+.||+++
T Consensus 109 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 109 LKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp GGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred HhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999999999999998766 2 2688999999874
No 337
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.41 E-value=1.3e-12 Score=132.00 Aligned_cols=117 Identities=21% Similarity=0.363 Sum_probs=69.0
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|+++++|++|+|++|.+++..| .+..+ +|++|+|++|+|+ .+|...+ ++|++|++++|++++..
T Consensus 62 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~ 137 (330)
T 1xku_A 62 NKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---KTLQELRVHENEITKVR 137 (330)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBC
T ss_pred CcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc---ccccEEECCCCcccccC
Confidence 44556666678888888888888888887655 34333 5777777777776 5665432 45555566555555555
Q ss_pred CccccCCCCCCEEeccCCcCCC--CCCCC--CCCCCCEEEcccCCCc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQG--KIPDF--PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g--~~p~~--~~~~L~~l~ls~N~l~ 122 (565)
+..|.++++|+.|+|++|.++. ..+.. .+++|+.|++++|+++
T Consensus 138 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 138 KSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp HHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred HhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 5555555555555555555542 22221 3444555555555544
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.41 E-value=3.3e-13 Score=146.64 Aligned_cols=122 Identities=23% Similarity=0.328 Sum_probs=58.9
Q ss_pred ccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
.+++..|.++++|++|+|++|++++..|. +..+ +|++|+|++|+++ .+|++.|.++++|++|+|++|++++..+..|
T Consensus 42 ~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~ 120 (570)
T 2z63_A 42 HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPI 120 (570)
T ss_dssp EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTSCCCCSTTCSC
T ss_pred ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC-ccCHhhhcCccccccccccccccccCCCccc
Confidence 34444455555555555555555544432 2222 4555555555555 3443445555555555555555554333345
Q ss_pred cCCCCCCEEeccCCcCCC-CCCCC--CCCCCCEEEcccCCCccCCCcc
Q 008431 84 AGLQKLLQLNLEGNSFQG-KIPDF--PLAHLTLLDLSYNQLVGRIPDT 128 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g-~~p~~--~~~~L~~l~ls~N~l~g~~p~~ 128 (565)
+++++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..|..
T Consensus 121 ~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred cccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 555555555555555554 22332 3455555555555555444443
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.41 E-value=9.5e-13 Score=133.11 Aligned_cols=135 Identities=24% Similarity=0.348 Sum_probs=95.3
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..++++.|.++++|+.|+|++|.+++..| .+..+ +|++|+|++|+++ .+|...+ ++|++|+|++|++++..
T Consensus 64 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~ 139 (332)
T 2ft3_A 64 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVP 139 (332)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCC
T ss_pred CcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccC
Confidence 44566777788889999999999999988766 34433 6888888888888 7887644 67888888888888766
Q ss_pred CccccCCCCCCEEeccCCcCCC--CCCCC--CCCCCCEEEcccCCCccCCCccccCCCCCcccCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQG--KIPDF--PLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGNK 141 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g--~~p~~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n~ 141 (565)
+..|.++++|+.|+|++|.++. ..|.. .+ +|+.|++++|++++.....+.++....+.+|.
T Consensus 140 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~ 204 (332)
T 2ft3_A 140 KGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNK 204 (332)
T ss_dssp SGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSC
T ss_pred HhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCc
Confidence 6778888888888888888863 44432 23 67777777777765322223344444555553
No 340
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.40 E-value=6e-13 Score=123.97 Aligned_cols=111 Identities=18% Similarity=0.190 Sum_probs=91.4
Q ss_pred hcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCC
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQK 88 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 88 (565)
.+..+++|+.|+|++|.+++..| .+..+ +|+.|+|++|++++..|. .|..+++|+.|+|++|.+.+.+| .+..+++
T Consensus 83 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~-~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~ 160 (197)
T 4ezg_A 83 PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILT-KINTLPKVNSIDLSYNGAITDIM-PLKTLPE 160 (197)
T ss_dssp GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHH-HHTTCSSCCEEECCSCTBCCCCG-GGGGCSS
T ss_pred hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHH-HHhhCCCCCEEEccCCCCccccH-hhcCCCC
Confidence 68899999999999999998544 45444 799999999999976665 48999999999999998334566 6999999
Q ss_pred CCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCcc
Q 008431 89 LLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 89 L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g 123 (565)
|+.|+|++|++++..+-..+++|+.|++++|++.+
T Consensus 161 L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 161 LKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred CCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99999999999975533478999999999999864
No 341
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.40 E-value=2.9e-13 Score=136.07 Aligned_cols=123 Identities=24% Similarity=0.165 Sum_probs=69.8
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccc-----------------------------
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTG----------------------------- 52 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g----------------------------- 52 (565)
|.+..++++.|..+++|+.|+|++|.+++.+|.....+|+.|+|++|+|++
T Consensus 44 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~ 123 (317)
T 3o53_A 44 NPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKK 123 (317)
T ss_dssp SCCCCCCHHHHTTCTTCCEEECTTSCCEEEEEETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCE
T ss_pred CccCcCCHHHhhCCCcCCEEECCCCcCCcchhhhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCC
Confidence 344556666778888888888888888765442112234444444444432
Q ss_pred ----------cCCcchhcCCCCccEEEccCCcCcccCCcccc-CCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCC
Q 008431 53 ----------EIPSDAFAGMDQLKKVHLARNHFSGQIPKSLA-GLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQL 121 (565)
Q Consensus 53 ----------~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l 121 (565)
.+++..|..+++|+.|+|++|.+++..|..+. .+++|++|+|++|++++..+...+++|+.|+|++|+|
T Consensus 124 ~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l 203 (317)
T 3o53_A 124 NIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKL 203 (317)
T ss_dssp EEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcC
Confidence 22333355555666666666666655555442 4566666666666665543333456666666666666
Q ss_pred ccC
Q 008431 122 VGR 124 (565)
Q Consensus 122 ~g~ 124 (565)
++.
T Consensus 204 ~~l 206 (317)
T 3o53_A 204 AFM 206 (317)
T ss_dssp CEE
T ss_pred Ccc
Confidence 643
No 342
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.39 E-value=6.4e-13 Score=143.87 Aligned_cols=105 Identities=23% Similarity=0.294 Sum_probs=75.5
Q ss_pred CCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEecc
Q 008431 17 GLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLE 95 (565)
Q Consensus 17 ~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 95 (565)
.|+.|+|++|.|++. |.++.+ +|+.|+|++|+|+ .||.. |+++++|+.|+|++|+|++ +| .|+++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~l-p~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTVL-CHLEQLLLVTHLDLSHNRLR-ALPPA-LAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSSC-CCGGGGTTCCEEECCSSCCC-CCCGG-GGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCCC-cCccccccCcEeecCccccc-ccchh-hhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 467777777777763 444443 5777777777777 77764 7777777777777777775 56 67777777777777
Q ss_pred CCcCCCCC-CCC--CCCCCCEEEcccCCCccCCC
Q 008431 96 GNSFQGKI-PDF--PLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 96 ~N~l~g~~-p~~--~~~~L~~l~ls~N~l~g~~p 126 (565)
+|+|++.. |.. .+++|+.|+|++|+|++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 77777765 543 56777777777777776655
No 343
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=9.5e-13 Score=119.59 Aligned_cols=100 Identities=20% Similarity=0.315 Sum_probs=86.6
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..||.. + .++|+.|+|++|+|++..|. +..+ +|+.|+|++|+|+ .+|+++|.++++|+.|+|++|+|++..
T Consensus 19 n~l~~ip~~-~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~ 94 (170)
T 3g39_A 19 KSLASVPTG-I--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSLNDNQLKSIP 94 (170)
T ss_dssp SCCSSCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCccCcc-C--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEECCCCccCEeC
Confidence 455678753 3 37899999999999998874 4444 7999999999999 788888999999999999999999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPD 105 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~ 105 (565)
|..|.++++|+.|+|++|.+++..+.
T Consensus 95 ~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 95 RGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp TTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred HHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 88899999999999999999976653
No 344
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.39 E-value=8e-13 Score=143.06 Aligned_cols=131 Identities=18% Similarity=0.251 Sum_probs=85.2
Q ss_pred cCCCCCCcEEEcccCcCccCCC---ccc-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc----
Q 008431 12 LSRLPGLRSLSFINNSFDGPMP---SVG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL---- 83 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p---~~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~---- 83 (565)
++.+++|+.|+|++|+|++..+ .+. ..+|+.|+|++|+|+ .+|.. +..+++|+.|+|++|+|++ +|..+
T Consensus 357 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~~~~L~~L~Ls~N~l~~-l~~~~~~~L 433 (549)
T 2z81_A 357 KGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDS-CQWPEKMRFLNLSSTGIRV-VKTCIPQTL 433 (549)
T ss_dssp TTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSC-CCCCTTCCEEECTTSCCSC-CCTTSCTTC
T ss_pred hhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChh-hcccccccEEECCCCCccc-ccchhcCCc
Confidence 5667777777777777765432 122 225777777777776 56654 5666666666666666652 22221
Q ss_pred --------------cCCCCCCEEeccCCcCCCCCCCC-CCCCCCEEEcccCCCccCCCccccCC---CCCcccCCCCCCC
Q 008431 84 --------------AGLQKLLQLNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVGRIPDTLSNF---DATSFQGNKGLCG 145 (565)
Q Consensus 84 --------------~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~~---~~~~~~~n~~~cg 145 (565)
.++++|++|+|++|+|+ .+|.. .+++|+.|+|++|+|++.+|..+..+ ....+.+|+..|.
T Consensus 434 ~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 434 EVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp SEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred eEEECCCCChhhhcccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 36777888888888887 44443 56788888888888888777665543 4456778887775
Q ss_pred C
Q 008431 146 K 146 (565)
Q Consensus 146 ~ 146 (565)
+
T Consensus 513 ~ 513 (549)
T 2z81_A 513 C 513 (549)
T ss_dssp H
T ss_pred C
Confidence 4
No 345
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=9.8e-13 Score=119.99 Aligned_cols=99 Identities=23% Similarity=0.367 Sum_probs=85.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.++.||.. + .++|+.|+|++|+|++.+|. +..+ +|+.|+|++|+|+ .+|+++|.++++|+.|+|++|+|++..
T Consensus 22 n~l~~iP~~-~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~l~~l~ 97 (174)
T 2r9u_A 22 IRLASVPAG-I--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLNDNHLKSIP 97 (174)
T ss_dssp SCCSSCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCCccCCC-c--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECCCCccceeC
Confidence 556788863 3 38899999999999998884 4444 7999999999999 689888999999999999999999877
Q ss_pred CccccCCCCCCEEeccCCcCCCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIP 104 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p 104 (565)
+..|..+++|+.|+|++|.+....+
T Consensus 98 ~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 98 RGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp TTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred HHHhccccCCCEEEeCCCCcccccc
Confidence 7779999999999999999997654
No 346
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.39 E-value=1.3e-12 Score=135.25 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=105.7
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc-cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..+++..|..+++|+.|+|++|.+++.+|. +..+ +|+.|+|++|+|+ .+|+.+|.++++|++|+|++|++++..
T Consensus 79 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 79 LQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccC
Confidence 445677878899999999999999999998875 4444 7999999999999 899988999999999999999999988
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCcc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g 123 (565)
|..|.++++|+.|+|++|++++. +...+++|+.|++++|.+++
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~-~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV-DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC-CGGGCTTCSEEECCSSCCSE
T ss_pred hhhccCCCCCCEEECCCCcCCcc-ccccccccceeecccccccc
Confidence 99999999999999999999965 43457889999999998875
No 347
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=148.91 Aligned_cols=108 Identities=26% Similarity=0.250 Sum_probs=46.1
Q ss_pred CCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEe
Q 008431 16 PGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLN 93 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 93 (565)
++|+.|+|++|.|++..| .+..+ .|++|+|++|.+.+.|++++|.++++|+.|+|++|.+++..|..|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 344444444444444333 22222 3444444444333344333444444444444444444444444444444444444
Q ss_pred ccCCcCCCCCCC---C-CCCCCCEEEcccCCCcc
Q 008431 94 LEGNSFQGKIPD---F-PLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 94 l~~N~l~g~~p~---~-~~~~L~~l~ls~N~l~g 123 (565)
|++|.+++.+|. + .+++|+.|+|++|++++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~ 137 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRS 137 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccc
Confidence 444444443222 1 33444444444444443
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.37 E-value=1.6e-12 Score=130.07 Aligned_cols=112 Identities=25% Similarity=0.357 Sum_probs=74.7
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCCcccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
..++ .+..+++|+.|+|++|.+++..+ +.. .+|+.|+|++|+++ .+| .|..+++|+.|+|++|++++ +|. +
T Consensus 54 ~~l~--~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~-~~~--~~~~l~~L~~L~l~~n~l~~-~~~-l 125 (308)
T 1h6u_A 54 TTIE--GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLK-NVS--AIAGLQSIKTLDLTSTQITD-VTP-L 125 (308)
T ss_dssp CCCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCS-CCG--GGTTCTTCCEEECTTSCCCC-CGG-G
T ss_pred cCch--hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCC-Cch--hhcCCCCCCEEECCCCCCCC-chh-h
Confidence 3454 36677777888888877776555 333 35777777777777 344 26777777777777777775 333 6
Q ss_pred cCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccC
Q 008431 84 AGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGR 124 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~ 124 (565)
..+++|+.|+|++|++++..+-..+++|+.|++++|++++.
T Consensus 126 ~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 126 AGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred cCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCC
Confidence 77777777777777777655433566777777777777653
No 349
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.37 E-value=2.1e-12 Score=145.87 Aligned_cols=120 Identities=16% Similarity=0.218 Sum_probs=60.8
Q ss_pred ccChhhcCCCCCCcEEEcccCcCccCCCccc-cc--------ccceeecccccccccCCcchh-cCCCCccEEEccCCcC
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVG-KL--------TLRALYLSLNKFTGEIPSDAF-AGMDQLKKVHLARNHF 75 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~--------~L~~L~Ls~N~l~g~ip~~~~-~~l~~L~~L~l~~N~l 75 (565)
.+|...+..+++|+.|+|++|+|+..++... .. +|+.|+|++|+|+ .||...+ ..+++|+.|+|++|+|
T Consensus 687 ~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L 765 (876)
T 4ecn_A 687 KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF 765 (876)
T ss_dssp SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCC
T ss_pred ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCC
Confidence 4444444455555555555555552222211 10 4555555555555 5554422 2555555555555555
Q ss_pred cccCCccccCCCCCCEEeccC------CcCCCCCCCC--CCCCCCEEEcccCCCccCCCcc
Q 008431 76 SGQIPKSLAGLQKLLQLNLEG------NSFQGKIPDF--PLAHLTLLDLSYNQLVGRIPDT 128 (565)
Q Consensus 76 ~g~~p~~~~~l~~L~~L~l~~------N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p~~ 128 (565)
++ +|..+.++++|+.|+|++ |++.+.+|.. .+++|+.|+|++|+| +.+|..
T Consensus 766 ~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~ 824 (876)
T 4ecn_A 766 SS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK 824 (876)
T ss_dssp SS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC
T ss_pred Cc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh
Confidence 54 455555555555555543 4555555542 355555555555555 445543
No 350
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.37 E-value=3.1e-13 Score=135.36 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=68.1
Q ss_pred CCCCCCcEEEcccCcCccCCCccc------ccccceeecccccccccCCcchhcCCCCccEEEccCCcCccc--C--Ccc
Q 008431 13 SRLPGLRSLSFINNSFDGPMPSVG------KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQ--I--PKS 82 (565)
Q Consensus 13 ~~l~~L~~L~l~~N~l~~~~p~~~------~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~--~--p~~ 82 (565)
..+++|+.|+|++|.+++..+.+. ..+|+.|+|++|+++ .+|+..|.++++|++|+|++|++.+. + +..
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 192 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSP-AFSCEQVRAFPALTSLDLSDNPGLGERGLMAALC 192 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSC-CCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSC
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcc-hhhHHHhccCCCCCEEECCCCCCccchhhhHHHh
Confidence 666666666777666666544221 225666777777666 34444566666677777777766542 1 122
Q ss_pred ccCCCCCCEEeccCCcCCCCCCC-----CCCCCCCEEEcccCCCccCCCccc
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIPD-----FPLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p~-----~~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
++.+++|++|+|++|+++...+. ..+++|+.|+|++|+|++..|..+
T Consensus 193 ~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~ 244 (310)
T 4glp_A 193 PHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA 244 (310)
T ss_dssp TTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC
T ss_pred hhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhH
Confidence 35566666666666666532211 134667777777777776666544
No 351
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.36 E-value=7.4e-13 Score=120.97 Aligned_cols=112 Identities=20% Similarity=0.165 Sum_probs=92.9
Q ss_pred hcCCCCCCcEEEcccCcCccCCCccc-cc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCC
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMPSVG-KL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQK 88 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p~~~-~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~ 88 (565)
.+.++++|+.|+|++|+|+.. |.+. .. +|+.|+|++|+|++ ++ .|..+++|++|+|++|+|++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~-~~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRK-LD--GFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCE-EC--CCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCc-cc--ccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 466789999999999999964 6443 33 79999999999995 53 4899999999999999999766666799999
Q ss_pred CCEEeccCCcCCCCCC--CC-CCCCCCEEEcccCCCccCCCc
Q 008431 89 LLQLNLEGNSFQGKIP--DF-PLAHLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 89 L~~L~l~~N~l~g~~p--~~-~~~~L~~l~ls~N~l~g~~p~ 127 (565)
|++|+|++|+++...+ .. .+++|+.|++++|+++. +|.
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~ 130 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKH 130 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STT
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCC-cHh
Confidence 9999999999975333 22 68899999999999984 454
No 352
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.36 E-value=1.4e-12 Score=141.60 Aligned_cols=104 Identities=26% Similarity=0.308 Sum_probs=48.9
Q ss_pred CCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEe
Q 008431 16 PGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLN 93 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 93 (565)
++|+.|+|++|.|++..| .+... +|+.|+|++|+|+ .+++++|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCC-cCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 445555555555554443 22222 4555555555555 233333555555555555555554 34433 455555555
Q ss_pred ccCCcCCCC-CCCC--CCCCCCEEEcccCCCcc
Q 008431 94 LEGNSFQGK-IPDF--PLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 94 l~~N~l~g~-~p~~--~~~~L~~l~ls~N~l~g 123 (565)
|++|++++. +|.. .+++|+.|++++|++++
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 555555442 2221 34455555555555443
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.36 E-value=8.6e-13 Score=141.88 Aligned_cols=103 Identities=23% Similarity=0.261 Sum_probs=47.7
Q ss_pred CCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEe
Q 008431 16 PGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLN 93 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~ 93 (565)
++|+.|+|++|.+++.+| .+... +|++|+|++|+|++ ++++.|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQY-LDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCE-EEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCC-cChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 445555555555554443 22222 35555555555552 22233555555555555555554 23433 445555555
Q ss_pred ccCCcCCC-CCCCC--CCCCCCEEEcccCCCc
Q 008431 94 LEGNSFQG-KIPDF--PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 94 l~~N~l~g-~~p~~--~~~~L~~l~ls~N~l~ 122 (565)
|++|++++ .+|.. .+++|+.|++++|+++
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccc
Confidence 55555544 23321 3444445555444444
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=1.4e-12 Score=129.30 Aligned_cols=128 Identities=24% Similarity=0.338 Sum_probs=95.8
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCcccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCc
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPK 81 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~ 81 (565)
.+..++ .+..+++|+.|+|++|++++..+ +.. .+|+.|+|++|+++ .+|. +..+++|+.|+|++|++++. .
T Consensus 57 ~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~L~~n~i~~~--~ 128 (291)
T 1h6t_A 57 DIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVK-DLSS--LKDLKKLKSLSLEHNGISDI--N 128 (291)
T ss_dssp CCCCCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CGGG--GTTCTTCCEEECTTSCCCCC--G
T ss_pred CcccCh--hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCC-CChh--hccCCCCCEEECCCCcCCCC--h
Confidence 344554 37788999999999999988666 433 36899999999988 4553 88889999999999998863 4
Q ss_pred cccCCCCCCEEeccCCcCCCCCCC-CCCCCCCEEEcccCCCccCCCccccCC---CCCcccCCC
Q 008431 82 SLAGLQKLLQLNLEGNSFQGKIPD-FPLAHLTLLDLSYNQLVGRIPDTLSNF---DATSFQGNK 141 (565)
Q Consensus 82 ~~~~l~~L~~L~l~~N~l~g~~p~-~~~~~L~~l~ls~N~l~g~~p~~~~~~---~~~~~~~n~ 141 (565)
.+..+++|+.|+|++|++++. +. ..+++|+.|++++|++++..| +..+ ....+.+|.
T Consensus 129 ~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 129 GLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp GGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred hhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 688888999999999988876 33 367888999999998887654 4333 334455654
No 355
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.35 E-value=1.2e-12 Score=131.02 Aligned_cols=133 Identities=23% Similarity=0.347 Sum_probs=103.0
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCcccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
|.+..+++ +..+++|+.|+|++|.+++. +.+.. .+|+.|+|++|+++ .+|+ +..+++|+.|+|++|++++..+
T Consensus 73 n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~~~ 146 (308)
T 1h6u_A 73 NQITDLAP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQIT-DVTP--LAGLSNLQVLYLDLNQITNISP 146 (308)
T ss_dssp SCCCCCGG--GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred CcCCCChh--HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCC-Cchh--hcCCCCCCEEECCCCccCcCcc
Confidence 34556664 88999999999999999875 44443 37999999999998 4664 8899999999999999986544
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCC-ccccCCCCCcccCCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIP-DTLSNFDATSFQGNKG 142 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p-~~~~~~~~~~~~~n~~ 142 (565)
+..+++|+.|+|++|++++..+-..+++|+.|++++|++++..+ ..+.++....+.+|..
T Consensus 147 --l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 147 --LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQI 207 (308)
T ss_dssp --GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred --ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCcc
Confidence 88999999999999999976664478899999999999986544 1233444455666653
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.35 E-value=1.2e-13 Score=154.28 Aligned_cols=127 Identities=23% Similarity=0.279 Sum_probs=104.2
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
|.+..||.. +..+++|+.|+|++|.|+ .+| .+..+ +|+.|+|++|+|+ .||.. |.+|++|+.|+|++|.|+ .+
T Consensus 234 n~l~~l~~~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~-~~~l~~L~~L~L~~N~l~-~l 308 (727)
T 4b8c_D 234 LQIFNISAN-IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAE-LGSCFQLKYFYFFDNMVT-TL 308 (727)
T ss_dssp SCCSCCCGG-GGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSS-GGGGTTCSEEECCSSCCC-CC
T ss_pred CCCCCCChh-hcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChh-hcCCCCCCEEECCCCCCC-cc
Confidence 455688864 558999999999999999 555 56555 7999999999999 89976 899999999999999997 78
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCCC--C-CCCCEEEcccCCCccCCCccccCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDFP--L-AHLTLLDLSYNQLVGRIPDTLSNFD 133 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~~--~-~~L~~l~ls~N~l~g~~p~~~~~~~ 133 (565)
|..|++|++|+.|+|++|.|++.+|... + ..+..|+|++|.++|.+|..+..+.
T Consensus 309 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~ 365 (727)
T 4b8c_D 309 PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIE 365 (727)
T ss_dssp CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----
T ss_pred ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeE
Confidence 9999999999999999999999888641 1 1233588999999999998876554
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.34 E-value=3.3e-12 Score=124.72 Aligned_cols=105 Identities=19% Similarity=0.316 Sum_probs=52.5
Q ss_pred cCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCC
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLL 90 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 90 (565)
+..+++|+.|++++|.|+.. |.+..+ +|+.|+|++|+|+ .+|+ |.++++|+.|+|++|++++ +|... . ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQSL-AGMQFFTNLKELHLSHNQIS-DLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCC
T ss_pred hhhcCcCcEEECcCCCcccc-hHHhhCCCCCEEECCCCccC-CChh--hccCCCCCEEECCCCccCC-cCccc-c-Cccc
Confidence 34455555556655555532 233222 4555555555555 3443 5555555555555555554 33221 1 5555
Q ss_pred EEeccCCcCCCCCCCCCCCCCCEEEcccCCCcc
Q 008431 91 QLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 91 ~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g 123 (565)
.|+|++|++++...-..+++|+.|++++|+|++
T Consensus 110 ~L~L~~N~l~~~~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 110 RLFLDNNELRDTDSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp EEECCSSCCSBSGGGTTCTTCCEEECTTSCCCB
T ss_pred EEEccCCccCCChhhcCcccccEEECCCCcCCC
Confidence 555555555543211244555555555555554
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.34 E-value=2.1e-12 Score=126.02 Aligned_cols=132 Identities=19% Similarity=0.285 Sum_probs=104.2
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCcccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
|.+..++ .+..+++|+.|+|++|+|++..+ +.. .+|+.|+|++|+|+ .+|. +.. ++|+.|+|++|++++ +|
T Consensus 51 n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~-~l~~--~~~-~~L~~L~L~~N~l~~-~~ 122 (263)
T 1xeu_A 51 SNIQSLA--GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK-NLNG--IPS-ACLSRLFLDNNELRD-TD 122 (263)
T ss_dssp SCCCCCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS-CCTT--CCC-SSCCEEECCSSCCSB-SG
T ss_pred CCcccch--HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC-CcCc--ccc-CcccEEEccCCccCC-Ch
Confidence 3455676 58889999999999999998776 443 37999999999999 5775 334 899999999999996 44
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLC 144 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~c 144 (565)
.+..+++|+.|+|++|++++..+-..+++|+.|++++|++++. ..+.. +....+.+|+..+
T Consensus 123 -~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 123 -SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred -hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 5999999999999999999764333789999999999999976 33443 3444566775444
No 359
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.33 E-value=7e-13 Score=121.15 Aligned_cols=115 Identities=19% Similarity=0.262 Sum_probs=95.1
Q ss_pred cccccChhhcCCCC-CCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 3 LMGMIDVDTLSRLP-GLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 3 ~~g~i~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
.+..+|. +..+. +|+.|+|++|.|++. +.+..+ +|+.|+|++|+|+ .+|+..|.++++|+.|+|++|+|+ .+|
T Consensus 30 ~l~~i~~--~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~-~~~ 104 (176)
T 1a9n_A 30 KIPVIEN--LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV-ELG 104 (176)
T ss_dssp CCCSCCC--GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC-CGG
T ss_pred CCchhHH--hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCC-cch
Confidence 3445642 44454 999999999999986 555444 7999999999999 688887899999999999999996 577
Q ss_pred c--cccCCCCCCEEeccCCcCCCCCCC----C-CCCCCCEEEcccCCCc
Q 008431 81 K--SLAGLQKLLQLNLEGNSFQGKIPD----F-PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 81 ~--~~~~l~~L~~L~l~~N~l~g~~p~----~-~~~~L~~l~ls~N~l~ 122 (565)
. .+..+++|+.|+|++|.++...+. . .+++|+.||+++|.+.
T Consensus 105 ~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 105 DLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp GGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred hhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6 899999999999999999854432 2 6889999999999875
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.33 E-value=3.9e-12 Score=129.71 Aligned_cols=105 Identities=22% Similarity=0.185 Sum_probs=51.6
Q ss_pred CCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEecc
Q 008431 16 PGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLE 95 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 95 (565)
+.....++++|.++..+..+. .+|+.|+|++|+++ .+|++.|.++++|+.|+|++|++++..|..|.++++|++|+|+
T Consensus 31 ~~~~~c~~~~~~l~~iP~~~~-~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 31 DRNGICKGSSGSLNSIPSGLT-EAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp CTTSEEECCSTTCSSCCTTCC-TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCeEeeCCCCCccccccccc-ccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 333445555555553322221 24555555555555 3444445555555555555555555445555555555555555
Q ss_pred CCcCCCCCCC--CCCCCCCEEEcccCCCc
Q 008431 96 GNSFQGKIPD--FPLAHLTLLDLSYNQLV 122 (565)
Q Consensus 96 ~N~l~g~~p~--~~~~~L~~l~ls~N~l~ 122 (565)
+|++++..+. ..+++|+.|++++|+++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 137 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYK 137 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCS
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCc
Confidence 5555543332 13455555555555555
No 361
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.33 E-value=1.4e-12 Score=131.02 Aligned_cols=129 Identities=26% Similarity=0.282 Sum_probs=101.6
Q ss_pred CCCCCcEEEcccCcCccCCC-cccc-cccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCE
Q 008431 14 RLPGLRSLSFINNSFDGPMP-SVGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQ 91 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~~~~p-~~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 91 (565)
.+++|+.|+|++|++++..| .+.. .+|+.|+|++|++++..|...+..+++|++|+|++|++++. |. ...+++|+.
T Consensus 118 ~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~ 195 (317)
T 3o53_A 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKT 195 (317)
T ss_dssp CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCE
T ss_pred ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCE
Confidence 46789999999999998766 3433 37999999999999655555446899999999999999965 43 345899999
Q ss_pred EeccCCcCCCCCCCC-CCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCCCC
Q 008431 92 LNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGLCG 145 (565)
Q Consensus 92 L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~cg 145 (565)
|+|++|++++..+.+ .+++|+.|++++|+|++ +|..+.. +....+.+|+..|+
T Consensus 196 L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 196 LDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp EECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred EECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 999999999876654 67899999999999995 5666644 44456778876654
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.32 E-value=4.4e-12 Score=125.75 Aligned_cols=106 Identities=25% Similarity=0.326 Sum_probs=66.2
Q ss_pred CCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCE
Q 008431 13 SRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQ 91 (565)
Q Consensus 13 ~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 91 (565)
..+++|+.|++++|.+... +.+..+ +|+.|+|++|+++ .+++ +.++++|+.|+|++|++++ +| .+..+++|+.
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~~~~~l~~L~~L~L~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLT-DIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-hhHhcCCCCCEEEccCCccC-CCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3456677777777776654 333332 5777777777776 3443 6667777777777777764 33 3667777777
Q ss_pred EeccCCcCCCCCCCCCCCCCCEEEcccCCCccC
Q 008431 92 LNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGR 124 (565)
Q Consensus 92 L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~ 124 (565)
|+|++|++++...-..+++|+.|++++|++++.
T Consensus 117 L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~ 149 (291)
T 1h6t_A 117 LSLEHNGISDINGLVHLPQLESLYLGNNKITDI 149 (291)
T ss_dssp EECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred EECCCCcCCCChhhcCCCCCCEEEccCCcCCcc
Confidence 777777776542112566677777777777654
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.32 E-value=3.4e-12 Score=139.06 Aligned_cols=129 Identities=24% Similarity=0.332 Sum_probs=94.7
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcc
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKS 82 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~ 82 (565)
.+..++ .|..|++|+.|+|++|.|++..|.....+|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++ + ..
T Consensus 54 ~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~-l-~~ 126 (605)
T 1m9s_A 54 DIKSVQ--GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIK-DLS--SLKDLKKLKSLSLEHNGISD-I-NG 126 (605)
T ss_dssp CCCCCT--TGGGCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCC-CCT--TSTTCTTCCEEECTTSCCCC-C-GG
T ss_pred CCCCCh--HHccCCCCCEEEeeCCCCCCChhhccCCCCCEEECcCCCCC-CCh--hhccCCCCCEEEecCCCCCC-C-cc
Confidence 344554 47888999999999999988666223336888899998888 455 37888888888888888885 3 35
Q ss_pred ccCCCCCCEEeccCCcCCCCCCC-CCCCCCCEEEcccCCCccCCCccccC---CCCCcccCCC
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIPD-FPLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNK 141 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p~-~~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~ 141 (565)
+..|++|+.|+|++|+|++. +. ..+++|+.|+|++|+|++..| +.. +..+.+.+|.
T Consensus 127 l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 127 LVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp GGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred ccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 78888888888888888876 33 367888888888888887665 433 3334455553
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.31 E-value=3e-12 Score=138.64 Aligned_cols=110 Identities=21% Similarity=0.253 Sum_probs=95.1
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC-
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI- 79 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~- 79 (565)
|.+..||. |+.+++|+.|+|++|.|+..++.++.+ +|+.|+|++|+|++ || .|+++++|+.|+|++|+|++.+
T Consensus 451 n~l~~lp~--~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp--~l~~l~~L~~L~Ls~N~l~~~~~ 525 (567)
T 1dce_A 451 KDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD--GVANLPRLQELLLCNNRLQQSAA 525 (567)
T ss_dssp SCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG--GGTTCSSCCEEECCSSCCCSSST
T ss_pred CCCCCCcC--ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc--ccCCCCCCcEEECCCCCCCCCCC
Confidence 45566874 899999999999999999443355555 79999999999995 88 4999999999999999999887
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC-----CCCCCCEEEc
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF-----PLAHLTLLDL 116 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~-----~~~~L~~l~l 116 (565)
|..|+++++|+.|+|++|.|++.+|.. .+++|+.|++
T Consensus 526 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 526 IQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999999999999999999988764 3789999875
No 365
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=4.9e-12 Score=128.62 Aligned_cols=104 Identities=18% Similarity=0.206 Sum_probs=87.7
Q ss_pred cEEEcccC-cCccCCCccccc-ccceeeccc-ccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEecc
Q 008431 19 RSLSFINN-SFDGPMPSVGKL-TLRALYLSL-NKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLE 95 (565)
Q Consensus 19 ~~L~l~~N-~l~~~~p~~~~~-~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~ 95 (565)
..+++++| +|++.++ +... +|+.|+|++ |+|+ .+|++.|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCC-CcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788888 8987555 6544 699999996 9998 6777779999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCC-CCCCCCEEEcccCCCccC
Q 008431 96 GNSFQGKIPDF-PLAHLTLLDLSYNQLVGR 124 (565)
Q Consensus 96 ~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~ 124 (565)
+|+|++..+.. ....|+.|+|++|.|...
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 99999776653 333499999999999754
No 366
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.28 E-value=1.5e-11 Score=132.79 Aligned_cols=118 Identities=22% Similarity=0.356 Sum_probs=69.9
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcccc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLA 84 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 84 (565)
+.||.. + +++|+.|+|++|+|+. +| ....+|+.|+|++|+|++ ||. |.+ +|+.|+|++|+|++ +|.
T Consensus 72 ~~lp~~-l--~~~L~~L~Ls~N~l~~-ip-~~l~~L~~L~Ls~N~l~~-ip~--l~~--~L~~L~Ls~N~l~~-lp~--- 137 (571)
T 3cvr_A 72 SSLPDN-L--PPQITVLEITQNALIS-LP-ELPASLEYLDACDNRLST-LPE--LPA--SLKHLDVDNNQLTM-LPE--- 137 (571)
T ss_dssp SCCCSC-C--CTTCSEEECCSSCCSC-CC-CCCTTCCEEECCSSCCSC-CCC--CCT--TCCEEECCSSCCSC-CCC---
T ss_pred CccCHh-H--cCCCCEEECcCCCCcc-cc-cccCCCCEEEccCCCCCC-cch--hhc--CCCEEECCCCcCCC-CCC---
Confidence 346653 2 2567777777777773 44 222357777777777774 665 433 67777777777765 554
Q ss_pred CCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCccc-cCCCCCcccCC
Q 008431 85 GLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTL-SNFDATSFQGN 140 (565)
Q Consensus 85 ~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~-~~~~~~~~~~n 140 (565)
.+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. | .++....+.+|
T Consensus 138 ~l~~L~~L~Ls~N~l~~-lp~-~l~~L~~L~Ls~N~L~~-lp~-l~~~L~~L~Ls~N 190 (571)
T 3cvr_A 138 LPALLEYINADNNQLTM-LPE-LPTSLEVLSVRNNQLTF-LPE-LPESLEALDVSTN 190 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSS
T ss_pred cCccccEEeCCCCccCc-CCC-cCCCcCEEECCCCCCCC-cch-hhCCCCEEECcCC
Confidence 45667777777777765 443 45666666666666665 444 3 23333344444
No 367
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=7.7e-12 Score=121.87 Aligned_cols=137 Identities=15% Similarity=0.029 Sum_probs=105.8
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CCCccceEEEEEecCceEEEEeccCCCCHH
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYRKEEKLLVSDFVPNGSLA 337 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~~gsL~ 337 (565)
..++.|+++.||++.. .+..+++|............+.+|+.+++.+. |..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 4567788899999874 46889999987532233456889999999885 667889999998888899999999999998
Q ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC-------------------------------------------
Q 008431 338 NLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF------------------------------------------- 374 (565)
Q Consensus 338 ~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------------------------------------------- 374 (565)
+.+. +......++.+++++|+.||+.-
T Consensus 99 ~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 7631 11223478899999999999810
Q ss_pred ------------CCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 375 ------------PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 375 ------------~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
.+..++|+|++|.|||++++..+.|+||+.+.
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999876566799998764
No 368
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.28 E-value=1.5e-11 Score=132.61 Aligned_cols=112 Identities=19% Similarity=0.327 Sum_probs=74.4
Q ss_pred CCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccC
Q 008431 17 GLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEG 96 (565)
Q Consensus 17 ~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 96 (565)
+|+.|+|++|.|++.++.+. .+|+.|+|++|+|+ .|| . .+++|+.|+|++|+|++ +|. |.+ +|+.|+|++
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~-~~L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP-PQITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC-TTCSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCccCHhHc-CCCCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 67777777777776333332 45777777777777 677 2 35677777777777776 665 554 777777777
Q ss_pred CcCCCCCCCCCCCCCCEEEcccCCCccCCCccccCCCCCcccCCC
Q 008431 97 NSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGNK 141 (565)
Q Consensus 97 N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n~ 141 (565)
|+|++ +|. .+++|+.|+|++|+|++ +|..+.++....+.+|.
T Consensus 130 N~l~~-lp~-~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 130 NQLTM-LPE-LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQ 171 (571)
T ss_dssp SCCSC-CCC-CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred CcCCC-CCC-cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCC
Confidence 77776 444 56777777777777776 55545555555566664
No 369
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.27 E-value=7.1e-12 Score=127.29 Aligned_cols=133 Identities=23% Similarity=0.261 Sum_probs=92.9
Q ss_pred ccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 4 MGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 4 ~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
+..+++ +..+++|+.|++++|.+++..+.....+|+.|+|++|+++ .+|+ +..+++|++|+|++|.+++ + ..+
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~ 261 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKIT-DLSP--LANLSQLTWLEIGTNQISD-I-NAV 261 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-C-GGG
T ss_pred cccccc--ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccC-CCcc--hhcCCCCCEEECCCCccCC-C-hhH
Confidence 344543 6778888888888888877655223336888888888887 4554 7778888888888888875 3 357
Q ss_pred cCCCCCCEEeccCCcCCCCCCC-CCCCCCCEEEcccCCCccCCCccccCCC---CCcccCCCCCC
Q 008431 84 AGLQKLLQLNLEGNSFQGKIPD-FPLAHLTLLDLSYNQLVGRIPDTLSNFD---ATSFQGNKGLC 144 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~p~-~~~~~L~~l~ls~N~l~g~~p~~~~~~~---~~~~~~n~~~c 144 (565)
..+++|+.|++++|++++. |. ..+++|+.|++++|++++..|..+..++ ...+.+|+...
T Consensus 262 ~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 262 KDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred hcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 7888888888888888764 33 2567888888888888777766554433 34566665443
No 370
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.27 E-value=9e-12 Score=131.58 Aligned_cols=127 Identities=16% Similarity=0.119 Sum_probs=92.4
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcc
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKS 82 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~ 82 (565)
.++.+ .++.+++|+.|+|++|+|++. |.....+|+.|+|++|+|++ ++ +..+++|+.|+|++|+|++ +|
T Consensus 160 ~~~~~---~~~~l~~L~~L~ls~n~l~~l-~l~~l~~L~~L~l~~N~l~~-~~---l~~l~~L~~L~Ls~N~l~~-ip-- 228 (457)
T 3bz5_A 160 KITKL---DVTPQTQLTTLDCSFNKITEL-DVSQNKLLNRLNCDTNNITK-LD---LNQNIQLTFLDCSSNKLTE-ID-- 228 (457)
T ss_dssp CCCCC---CCTTCTTCCEEECCSSCCCCC-CCTTCTTCCEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSC-CC--
T ss_pred ccccc---ccccCCcCCEEECCCCcccee-ccccCCCCCEEECcCCcCCe-ec---cccCCCCCEEECcCCcccc-cC--
Confidence 45555 377899999999999999984 42233479999999999984 43 7888999999999999997 66
Q ss_pred ccCCCCCCEEeccCCcCCCCCCCCCCC----------CCCEEEcccCCCccCCCc-cccCCCCCcccCCC
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIPDFPLA----------HLTLLDLSYNQLVGRIPD-TLSNFDATSFQGNK 141 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p~~~~~----------~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~n~ 141 (565)
++.+++|+.|+|++|++++..+. .++ +|+.|++++|.+.|.+|. .+.++....+.+|+
T Consensus 229 ~~~l~~L~~L~l~~N~l~~~~~~-~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~ 297 (457)
T 3bz5_A 229 VTPLTQLTYFDCSVNPLTELDVS-TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNT 297 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCCCCT-TCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCT
T ss_pred ccccCCCCEEEeeCCcCCCcCHH-HCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCc
Confidence 88899999999999999986543 233 445556666666665553 23444555555554
No 371
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.26 E-value=5.8e-12 Score=127.96 Aligned_cols=125 Identities=26% Similarity=0.338 Sum_probs=102.3
Q ss_pred cCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCE
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQ 91 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 91 (565)
+..+++|+.|+|++|.+++..+.....+|+.|+|++|+++ .++ .+..+++|+.|+|++|++++. ..+..+++|+.
T Consensus 217 ~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~-~~~--~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 291 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQIS-DIN--AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNS 291 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-CCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccC-CCh--hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCE
Confidence 7889999999999999998666333347999999999998 454 488999999999999999864 45889999999
Q ss_pred EeccCCcCCCCCCCC--CCCCCCEEEcccCCCccCCC-ccccCCCCCcccCCC
Q 008431 92 LNLEGNSFQGKIPDF--PLAHLTLLDLSYNQLVGRIP-DTLSNFDATSFQGNK 141 (565)
Q Consensus 92 L~l~~N~l~g~~p~~--~~~~L~~l~ls~N~l~g~~p-~~~~~~~~~~~~~n~ 141 (565)
|+|++|++++..|.. .+++|+.|++++|++++..| ..+.++....+.+|+
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC-
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhhc
Confidence 999999999877763 68899999999999998777 334455556667764
No 372
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.26 E-value=1.3e-11 Score=134.47 Aligned_cols=130 Identities=27% Similarity=0.323 Sum_probs=103.9
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCC
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIP 80 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p 80 (565)
|.+..+++ |..|++|+.|+|++|.|++. |.+..+ +|+.|+|++|+|+ .+|. +..|++|+.|+|++|+|++.
T Consensus 75 N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~-~l~~--l~~l~~L~~L~Ls~N~l~~l-- 146 (605)
T 1m9s_A 75 NKLTDIKP--LTNLKNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGIS-DING--LVHLPQLESLYLGNNKITDI-- 146 (605)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCC-CCGG--GGGCTTCSEEECCSSCCCCC--
T ss_pred CCCCCChh--hccCCCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCC-CCcc--ccCCCccCEEECCCCccCCc--
Confidence 33455654 88999999999999999974 445444 7999999999998 4553 88999999999999999975
Q ss_pred ccccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCccccC---CCCCcccCCC
Q 008431 81 KSLAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNK 141 (565)
Q Consensus 81 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~ 141 (565)
..|..+++|+.|+|++|+|++..|-..+++|+.|+|++|+|++. | .+.. +..+.+.+|+
T Consensus 147 ~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 147 TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQE 208 (605)
T ss_dssp GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEE
T ss_pred hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCc
Confidence 67899999999999999999888855789999999999999874 3 3443 4444556664
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.24 E-value=1.5e-11 Score=130.29 Aligned_cols=133 Identities=22% Similarity=0.248 Sum_probs=103.9
Q ss_pred ccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 4 MGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 4 ~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
+..+++ +..+++|+.|+|++|.+++..+.....+|+.|+|++|++++ +++ +..+++|+.|+|++|++++..| +
T Consensus 255 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~-~~~--~~~l~~L~~L~L~~n~l~~~~~--~ 327 (466)
T 1o6v_A 255 ISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLED-ISP--ISNLKNLTYLTLYFNNISDISP--V 327 (466)
T ss_dssp CCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSC-CGG--GGGCTTCSEEECCSSCCSCCGG--G
T ss_pred cccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccC-chh--hcCCCCCCEEECcCCcCCCchh--h
Confidence 344543 88999999999999999987663334479999999999994 554 7889999999999999998766 7
Q ss_pred cCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCc-cccCCCCCcccCCCCC
Q 008431 84 AGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPD-TLSNFDATSFQGNKGL 143 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~n~~~ 143 (565)
..+++|+.|++++|++++...-..+++|+.|++++|++++..|- .+.++....+.+|+..
T Consensus 328 ~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 328 SSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 388 (466)
T ss_dssp GGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEEEE
T ss_pred ccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCccc
Confidence 89999999999999999863334789999999999999988771 1233334455666543
No 374
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.23 E-value=5.5e-11 Score=125.53 Aligned_cols=104 Identities=23% Similarity=0.194 Sum_probs=64.0
Q ss_pred cCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCE
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQ 91 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~ 91 (565)
++.+++|+.|+|++|+|++. +.....+|+.|+|++|++.+.++ +..+++|+.|+|++|++++ +| ++.+++|+.
T Consensus 123 ~~~l~~L~~L~l~~N~l~~l-~l~~l~~L~~L~l~~n~~~~~~~---~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~ 195 (457)
T 3bz5_A 123 VSQNPLLTYLNCARNTLTEI-DVSHNTQLTELDCHLNKKITKLD---VTPQTQLTTLDCSFNKITE-LD--VSQNKLLNR 195 (457)
T ss_dssp CTTCTTCCEEECTTSCCSCC-CCTTCTTCCEEECTTCSCCCCCC---CTTCTTCCEEECCSSCCCC-CC--CTTCTTCCE
T ss_pred CCCCCcCCEEECCCCcccee-ccccCCcCCEEECCCCCcccccc---cccCCcCCEEECCCCccce-ec--cccCCCCCE
Confidence 67788888888888888874 32222356666666665544553 5556666666666666665 34 556666666
Q ss_pred EeccCCcCCCCCCCCCCCCCCEEEcccCCCcc
Q 008431 92 LNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 92 L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g 123 (565)
|++++|++++. +-..+++|+.|++++|+|++
T Consensus 196 L~l~~N~l~~~-~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 196 LNCDTNNITKL-DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp EECCSSCCSCC-CCTTCTTCSEEECCSSCCSC
T ss_pred EECcCCcCCee-ccccCCCCCEEECcCCcccc
Confidence 66666666653 33345566666666666655
No 375
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.23 E-value=2.3e-11 Score=128.84 Aligned_cols=126 Identities=27% Similarity=0.335 Sum_probs=104.7
Q ss_pred hcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCC
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLL 90 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~ 90 (565)
.+..+++|+.|+|++|.+++..|.....+|+.|+|++|+++ .+|+ +..+++|+.|+|++|++++..| +..+++|+
T Consensus 238 ~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 312 (466)
T 1o6v_A 238 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS-NISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT 312 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCC-CCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCS
T ss_pred hhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccC-cccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCC
Confidence 57889999999999999998776334447999999999999 4554 8899999999999999997555 88999999
Q ss_pred EEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCccccC---CCCCcccCCCCC
Q 008431 91 QLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLSN---FDATSFQGNKGL 143 (565)
Q Consensus 91 ~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~---~~~~~~~~n~~~ 143 (565)
.|+|++|++++..|...+++|+.|++++|++++. ..+.+ +....+.+|...
T Consensus 313 ~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 313 YLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp EEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred EEECcCCcCCCchhhccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccC
Confidence 9999999999988866789999999999999975 23443 444456666543
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1.8e-11 Score=124.46 Aligned_cols=97 Identities=23% Similarity=0.267 Sum_probs=83.7
Q ss_pred cccccChhhcCCCCCCcEEEccc-CcCccCCC-ccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFIN-NSFDGPMP-SVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~-N~l~~~~p-~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
.+..||. |..+++|+.|+|++ |.|++.+| .+..+ +|+.|+|++|+|+| +|+++|.+|++|+.|+|++|+|++..
T Consensus 20 ~l~~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~ 96 (347)
T 2ifg_A 20 ALDSLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF-VAPDAFHFTPRLSRLNLSFNALESLS 96 (347)
T ss_dssp CCTTTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCE-ECTTGGGSCSCCCEEECCSSCCSCCC
T ss_pred CCCccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccce-eCHHHhcCCcCCCEEeCCCCccceeC
Confidence 4567986 99999999999996 99999887 35444 79999999999995 66677999999999999999999877
Q ss_pred CccccCCCCCCEEeccCCcCCCCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKI 103 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~ 103 (565)
|..|..+. |+.|+|++|.|....
T Consensus 97 ~~~~~~~~-L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 97 WKTVQGLS-LQELVLSGNPLHCSC 119 (347)
T ss_dssp STTTCSCC-CCEEECCSSCCCCCG
T ss_pred HHHcccCC-ceEEEeeCCCccCCC
Confidence 77777776 999999999998643
No 377
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.22 E-value=7.5e-14 Score=130.24 Aligned_cols=112 Identities=24% Similarity=0.283 Sum_probs=74.7
Q ss_pred hcCCCCCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCC
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKL 89 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L 89 (565)
.|..+++|+.|+|++|.|++ +|.+..+ +|+.|+|++|+|+ .+|. .+..+++|+.|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~-~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIEN-LDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSS-HHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccc-hhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 56677777777777777776 4444333 5777777777777 6665 35556777777777777775 44 46777777
Q ss_pred CEEeccCCcCCCCCC--C-CCCCCCCEEEcccCCCccCCCc
Q 008431 90 LQLNLEGNSFQGKIP--D-FPLAHLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 90 ~~L~l~~N~l~g~~p--~-~~~~~L~~l~ls~N~l~g~~p~ 127 (565)
+.|+|++|++++..+ . ..+++|+.|++++|++++.+|.
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 777777777775332 1 2566777777777777665543
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.20 E-value=8.8e-11 Score=123.86 Aligned_cols=100 Identities=23% Similarity=0.373 Sum_probs=53.6
Q ss_pred CCCcEEEcccCcCccCCCccccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEec
Q 008431 16 PGLRSLSFINNSFDGPMPSVGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNL 94 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p~~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 94 (565)
++|++|+|++|++++ +|.+..+ +|++|+|++|+++ .+|.. ..+|++|+|++|++++ +| .|+++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N~l~-~lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNNSLK-KLPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-CcccCCCCCCCEEECCCCcCc-ccCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 456666666666665 3443333 4666666666665 35532 1356666666666654 44 3556666666666
Q ss_pred cCCcCCCCCCCCCCCCCCEEEcccCCCccCCC
Q 008431 95 EGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIP 126 (565)
Q Consensus 95 ~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p 126 (565)
++|++++ +|.. ..+|+.|++++|+++ .+|
T Consensus 203 ~~N~l~~-l~~~-~~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 203 DNNSLKK-LPDL-PLSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CSSCCSS-CCCC-CTTCCEEECCSSCCS-SCC
T ss_pred CCCcCCc-CCCC-cCcccEEECcCCcCC-ccc
Confidence 6666654 2322 135555555555555 344
No 379
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.14 E-value=8.4e-11 Score=119.70 Aligned_cols=137 Identities=20% Similarity=0.245 Sum_probs=96.0
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCCc--ccccccceeeccc-ccccccCCcchhcCCC-CccEEEccCCcCcc
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS--VGKLTLRALYLSL-NKFTGEIPSDAFAGMD-QLKKVHLARNHFSG 77 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~~L~~L~Ls~-N~l~g~ip~~~~~~l~-~L~~L~l~~N~l~g 77 (565)
|.+..|+++.|..+++|+.|++++|+|++..+. ....++..|++++ |++. .+|...|.++. .|+.|+|++|+|+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhccccccccC
Confidence 445567777788888888888888888766552 2333566777755 4565 67777777765 58889999999985
Q ss_pred cCCccccCCCCCCEEeccC-CcCCCCCCC-C--CCCCCCEEEcccCCCccCCCccccCCCCCcccCCC
Q 008431 78 QIPKSLAGLQKLLQLNLEG-NSFQGKIPD-F--PLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGNK 141 (565)
Q Consensus 78 ~~p~~~~~l~~L~~L~l~~-N~l~g~~p~-~--~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n~ 141 (565)
+|.......+|..|++++ |.++ .+|. . .+++|+.|||++|+|+...+..+.++......++.
T Consensus 169 -i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 169 -IHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp -ECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT
T ss_pred -CChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC
Confidence 444444567788999876 4555 4554 2 67889999999999987666667777666554443
No 380
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.13 E-value=7.5e-11 Score=114.36 Aligned_cols=132 Identities=14% Similarity=0.139 Sum_probs=96.7
Q ss_pred eec-ccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCC--ccceEEEEEecCceEEEEeccCCCCH
Q 008431 260 VLG-SGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN--LLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 260 ~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
.++ .|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.+ +.+++++....+..++||||++|.+|
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 55669999998767888999987543 2346788999998886545 45688888777788999999999887
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC------------------------------------------
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF------------------------------------------ 374 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~------------------------------------------ 374 (565)
. .. . .. ...++.+++..|+.||+..
T Consensus 103 ~--~~---~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (264)
T 1nd4_A 103 L--SS---H-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAE 169 (264)
T ss_dssp T--TS---C-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHH
T ss_pred C--cC---c-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHH
Confidence 4 11 0 11 2356777778888887631
Q ss_pred ------------CCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 375 ------------PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 375 ------------~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
.+..++|+|++|.|||++++..+.|+|||.+..
T Consensus 170 ~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 170 LFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 012389999999999998876677999998643
No 381
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.10 E-value=5.2e-10 Score=117.96 Aligned_cols=98 Identities=23% Similarity=0.372 Sum_probs=62.3
Q ss_pred CCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEec
Q 008431 15 LPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNL 94 (565)
Q Consensus 15 l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l 94 (565)
.++|+.|+|++|.+++ +|.. ..+|+.|+|++|+++ .+|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~-~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL-PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC-CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred cCCCCEEEccCCcCCc-cccc-cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 3577888888888877 4432 135777777777776 34431 1567777777777765 55 4677777777777
Q ss_pred cCCcCCCCCCCCCCCCCCEEEcccCCCcc
Q 008431 95 EGNSFQGKIPDFPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 95 ~~N~l~g~~p~~~~~~L~~l~ls~N~l~g 123 (565)
++|++++ +|.. ..+|+.|++++|++++
T Consensus 161 ~~N~l~~-lp~~-~~~L~~L~L~~n~l~~ 187 (454)
T 1jl5_A 161 DNNSLKK-LPDL-PPSLEFIAAGNNQLEE 187 (454)
T ss_dssp CSSCCSC-CCCC-CTTCCEEECCSSCCSS
T ss_pred CCCcCcc-cCCC-cccccEEECcCCcCCc
Confidence 7777765 3432 2466677777776665
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.09 E-value=4.4e-10 Score=122.66 Aligned_cols=121 Identities=22% Similarity=0.200 Sum_probs=82.5
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcc
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKS 82 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~ 82 (565)
.+..||.. +. ++|+.|+|++|+|+..++ ...+|+.|+|++|+|+ .||. .+++|+.|+|++|+|++ +|.
T Consensus 51 ~L~~lp~~-l~--~~L~~L~L~~N~l~~lp~--~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~- 118 (622)
T 3g06_A 51 GLTTLPDC-LP--AHITTLVIPDNNLTSLPA--LPPELRTLEVSGNQLT-SLPV----LPPGLLELSIFSNPLTH-LPA- 118 (622)
T ss_dssp CCSCCCSC-CC--TTCSEEEECSCCCSCCCC--CCTTCCEEEECSCCCS-CCCC----CCTTCCEEEECSCCCCC-CCC-
T ss_pred CcCccChh-hC--CCCcEEEecCCCCCCCCC--cCCCCCEEEcCCCcCC-cCCC----CCCCCCEEECcCCcCCC-CCC-
Confidence 34567753 33 688888888888885433 3347888888888888 6776 56788888888888885 454
Q ss_pred ccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCCccCCCccccCCCCCcccCC
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQLVGRIPDTLSNFDATSFQGN 140 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~n 140 (565)
.+++|+.|+|++|++++ +|. .+++|+.|+|++|+|++ +|..+.++....+.+|
T Consensus 119 --~l~~L~~L~L~~N~l~~-lp~-~l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N 171 (622)
T 3g06_A 119 --LPSGLCKLWIFGNQLTS-LPV-LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNN 171 (622)
T ss_dssp --CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSS
T ss_pred --CCCCcCEEECCCCCCCc-CCC-CCCCCCEEECcCCcCCC-cCCccCCCCEEECCCC
Confidence 55778888888888876 333 24777888888887775 3444444444444444
No 383
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.09 E-value=5.7e-10 Score=121.79 Aligned_cols=90 Identities=26% Similarity=0.314 Sum_probs=46.5
Q ss_pred ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEccc
Q 008431 39 TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSY 118 (565)
Q Consensus 39 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~ 118 (565)
+|+.|+|++|+|+ .+|.. +++|+.|++++|.|+ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++
T Consensus 182 ~L~~L~Ls~N~l~-~l~~~----~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp-~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 182 GLQELSVSDNQLA-SLPTL----PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP-VLPSELKELMVSG 250 (622)
T ss_dssp TCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC-CCCTTCCEEECCS
T ss_pred CCcEEECCCCCCC-CCCCc----cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC-CCCCcCcEEECCC
Confidence 4666777777766 45542 245555555555555 23332 2455555555555554 33 2335555555555
Q ss_pred CCCccCCCccccCCCCCcccCC
Q 008431 119 NQLVGRIPDTLSNFDATSFQGN 140 (565)
Q Consensus 119 N~l~g~~p~~~~~~~~~~~~~n 140 (565)
|+|+. +|..+.++....+.+|
T Consensus 251 N~L~~-lp~~~~~L~~L~Ls~N 271 (622)
T 3g06_A 251 NRLTS-LPMLPSGLLSLSVYRN 271 (622)
T ss_dssp SCCSC-CCCCCTTCCEEECCSS
T ss_pred CCCCc-CCcccccCcEEeCCCC
Confidence 55552 3334444444444444
No 384
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.08 E-value=1.4e-10 Score=118.04 Aligned_cols=127 Identities=16% Similarity=0.127 Sum_probs=98.8
Q ss_pred cccccChhhcCCCCCCcEEEcccCcCccCCCc-ccc-cccceeecccccccccCCcchhcCCCCccE-EEccCCcCcccC
Q 008431 3 LMGMIDVDTLSRLPGLRSLSFINNSFDGPMPS-VGK-LTLRALYLSLNKFTGEIPSDAFAGMDQLKK-VHLARNHFSGQI 79 (565)
Q Consensus 3 ~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~-L~l~~N~l~g~~ 79 (565)
-+.+||.+ + .++|+.|+|++|+|+...+. +.. .+|+.|+|++|++.+.||.++|.++++|.+ +.++.|+|+...
T Consensus 20 ~Lt~iP~~-l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~ 96 (350)
T 4ay9_X 20 KVTEIPSD-L--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYIN 96 (350)
T ss_dssp TCCSCCTT-C--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEEC
T ss_pred CCCccCcC-c--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccC
Confidence 34578753 3 36899999999999977663 443 479999999999987899999999998775 667789999888
Q ss_pred CccccCCCCCCEEeccCCcCCCCCCCC--CCCCCCEEEccc-CCCccCCCccccCC
Q 008431 80 PKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHLTLLDLSY-NQLVGRIPDTLSNF 132 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L~~l~ls~-N~l~g~~p~~~~~~ 132 (565)
|..|.++++|++|++++|++++..+.. ...++..|++++ |++....+..|..+
T Consensus 97 ~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 97 PEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp TTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred chhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 999999999999999999999766653 345567788765 56665555555443
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.00 E-value=8.9e-11 Score=120.07 Aligned_cols=138 Identities=22% Similarity=0.228 Sum_probs=95.4
Q ss_pred CcccccChhhcCCCCCCcEEEcccCcCccCCC----c-c-ccc-ccceeecccccccccCCcchhcCC-----CCccEEE
Q 008431 2 NLMGMIDVDTLSRLPGLRSLSFINNSFDGPMP----S-V-GKL-TLRALYLSLNKFTGEIPSDAFAGM-----DQLKKVH 69 (565)
Q Consensus 2 n~~g~i~~~~~~~l~~L~~L~l~~N~l~~~~p----~-~-~~~-~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~ 69 (565)
++.|.+| ..+...++|+.|+|++|.|++..+ . + ... +|+.|+|++|+|++..+ ..|..+ ++|++|+
T Consensus 9 ~~~~~~~-~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~-~~l~~~l~~~~~~L~~L~ 86 (362)
T 3goz_A 9 PGSNPVE-EFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNS-DELVQILAAIPANVTSLN 86 (362)
T ss_dssp TTCCHHH-HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCH-HHHHHHHHTSCTTCCEEE
T ss_pred cchHHHH-HHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHH-HHHHHHHhccCCCccEEE
Confidence 3455555 456666679999999999987665 1 1 223 69999999999985433 345554 8899999
Q ss_pred ccCCcCcccCCccccC----C-CCCCEEeccCCcCCCCCCCC------C-CCCCCEEEcccCCCccCCCccc--------
Q 008431 70 LARNHFSGQIPKSLAG----L-QKLLQLNLEGNSFQGKIPDF------P-LAHLTLLDLSYNQLVGRIPDTL-------- 129 (565)
Q Consensus 70 l~~N~l~g~~p~~~~~----l-~~L~~L~l~~N~l~g~~p~~------~-~~~L~~l~ls~N~l~g~~p~~~-------- 129 (565)
|++|.+++..+..+.. + ++|+.|+|++|++++..+.. . ..+|+.|+|++|+|+...+..+
T Consensus 87 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 166 (362)
T 3goz_A 87 LSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIP 166 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred CcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCC
Confidence 9999998777765443 4 88999999999988655431 2 3589999999999885433322
Q ss_pred cCCCCCcccCCC
Q 008431 130 SNFDATSFQGNK 141 (565)
Q Consensus 130 ~~~~~~~~~~n~ 141 (565)
.++....+.+|.
T Consensus 167 ~~L~~L~Ls~n~ 178 (362)
T 3goz_A 167 ANVNSLNLRGNN 178 (362)
T ss_dssp TTCCEEECTTSC
T ss_pred ccccEeeecCCC
Confidence 244445555654
No 386
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98 E-value=7.3e-10 Score=113.11 Aligned_cols=142 Identities=15% Similarity=0.198 Sum_probs=104.1
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEee--ccC-ccCHHHHHHHHHHHhcCC--CCCccceEEEEEec---CceEEEEec
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFR--QMS-NVGKEDFHEHMTRLGSLS--HPNLLPLIAFYYRK---EEKLLVSDF 330 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~E~ 330 (565)
+.++.|.++.||+.... +..+++|+.. ... ......+.+|+.+++.+. +..+.+++.++.+. +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 57899999999998864 4678888765 322 122456888999999887 44578888888765 348999999
Q ss_pred cCCCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 008431 331 VPNGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFP----------------------------------- 375 (565)
Q Consensus 331 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~----------------------------------- 375 (565)
++|..+.+.. ...++...+..++.+++..|+.||+.-.
T Consensus 123 v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9987764311 1237788889999999999999997310
Q ss_pred -------------------CCCCccCCCCCCCEEEcCCCC--cEEeccCCcccc
Q 008431 376 -------------------GVTLPHGHLKSSNVLLDNAYE--PLLTDYALVPIV 408 (565)
Q Consensus 376 -------------------~~~ivHrDlkp~NILl~~~~~--~kl~DfGla~~~ 408 (565)
+..++|+|++|.|||++.++. +.|.||+.+...
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 236899999999999987653 689999988653
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.97 E-value=2e-12 Score=120.50 Aligned_cols=125 Identities=22% Similarity=0.312 Sum_probs=99.2
Q ss_pred cCCCCCCcEEEcccCcCccCCCc-------cccc-ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPS-------VGKL-TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~-------~~~~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
+.....++.++|+.|.|+|.+|. +... .|+.|+|++|+|++ +| .|.++++|+.|+|++|+++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~--~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS--SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC--CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc--ccccCCCCCEEECCCCCcc-cccchh
Confidence 45567888999999999998874 3333 69999999999994 88 4899999999999999999 688888
Q ss_pred cCCCCCCEEeccCCcCCCCCCCC-CCCCCCEEEcccCCCccCCC-cccc---CCCCCcccCCC
Q 008431 84 AGLQKLLQLNLEGNSFQGKIPDF-PLAHLTLLDLSYNQLVGRIP-DTLS---NFDATSFQGNK 141 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~p~~-~~~~L~~l~ls~N~l~g~~p-~~~~---~~~~~~~~~n~ 141 (565)
..+++|+.|+|++|++++. |.. .+++|+.|++++|++++..+ ..+. ++....+.+|+
T Consensus 90 ~~~~~L~~L~L~~N~l~~l-~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 90 AVADTLEELWISYNQIASL-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHHHCSEEEEEEEECCCH-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred hcCCcCCEEECcCCcCCcC-CccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 8889999999999999974 443 57899999999999985332 2333 33344455554
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.96 E-value=1e-10 Score=119.58 Aligned_cols=125 Identities=22% Similarity=0.257 Sum_probs=73.5
Q ss_pred cccccCh----hhcCCCC-CCcEEEcccCcCccCCC-cccc------cccceeecccccccccCCcc---hhcCC-CCcc
Q 008431 3 LMGMIDV----DTLSRLP-GLRSLSFINNSFDGPMP-SVGK------LTLRALYLSLNKFTGEIPSD---AFAGM-DQLK 66 (565)
Q Consensus 3 ~~g~i~~----~~~~~l~-~L~~L~l~~N~l~~~~p-~~~~------~~L~~L~Ls~N~l~g~ip~~---~~~~l-~~L~ 66 (565)
.++.++. +.|..++ +|+.|+|++|.|++..+ .+.. .+|+.|+|++|+|++..+.. .+..+ ++|+
T Consensus 33 ~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~ 112 (362)
T 3goz_A 33 NLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTIT 112 (362)
T ss_dssp CGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred CCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCcc
Confidence 3445554 5566666 67777777777776544 2222 35777777777776433321 13333 6777
Q ss_pred EEEccCCcCcccCCcccc----C-CCCCCEEeccCCcCCCCCCCC------CC-CCCCEEEcccCCCccCCCc
Q 008431 67 KVHLARNHFSGQIPKSLA----G-LQKLLQLNLEGNSFQGKIPDF------PL-AHLTLLDLSYNQLVGRIPD 127 (565)
Q Consensus 67 ~L~l~~N~l~g~~p~~~~----~-l~~L~~L~l~~N~l~g~~p~~------~~-~~L~~l~ls~N~l~g~~p~ 127 (565)
+|+|++|+|++..+..+. . .++|++|+|++|+++...+.. .+ .+|+.|+|++|+|++..+.
T Consensus 113 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~ 185 (362)
T 3goz_A 113 VLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCA 185 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH
T ss_pred EEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHH
Confidence 777777777665554433 2 257777777777776432211 22 3677777777777665543
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.95 E-value=3.4e-11 Score=124.30 Aligned_cols=114 Identities=25% Similarity=0.334 Sum_probs=70.1
Q ss_pred hcCCCCCCcEEEcccCcCccCCC-cccc--------------cccceeeccccccc-ccCCc--chhcCCCCccEEEccC
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMP-SVGK--------------LTLRALYLSLNKFT-GEIPS--DAFAGMDQLKKVHLAR 72 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~--------------~~L~~L~Ls~N~l~-g~ip~--~~~~~l~~L~~L~l~~ 72 (565)
.+..+++|+.|+|++|.|+...+ .+.. .+|+.|+|++|+|+ +.+|. ..|..+++|++|+|++
T Consensus 117 ~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~ 196 (386)
T 2ca6_A 117 FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQ 196 (386)
T ss_dssp HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcC
Confidence 56677788888888887764322 1111 36777777777776 33442 2355666777777777
Q ss_pred CcCc--c---cCCccccCCCCCCEEeccCCcCC----CCCCCC--CCCCCCEEEcccCCCccC
Q 008431 73 NHFS--G---QIPKSLAGLQKLLQLNLEGNSFQ----GKIPDF--PLAHLTLLDLSYNQLVGR 124 (565)
Q Consensus 73 N~l~--g---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~--~~~~L~~l~ls~N~l~g~ 124 (565)
|+|+ | .+|..+..+++|+.|+|++|.++ +.+|.. .+++|+.|+|++|+|++.
T Consensus 197 n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 197 NGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp SCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred CCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 7776 2 34446666777777777777764 333321 456677777777776654
No 390
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.95 E-value=4.6e-10 Score=111.81 Aligned_cols=182 Identities=17% Similarity=0.162 Sum_probs=120.3
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CCC--ccceEEEEEecC---ceEEEEeccC
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HPN--LLPLIAFYYRKE---EKLLVSDFVP 332 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~E~~~ 332 (565)
+.++.|.+..||+.. ..+++|..... .....+.+|..+|+.+. +.. +.+.+.+....+ ..|+|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 468999999999763 56888886432 23567889999998874 332 334444332322 3489999999
Q ss_pred CCCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC--------------------------------------
Q 008431 333 NGSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF-------------------------------------- 374 (565)
Q Consensus 333 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~-------------------------------------- 374 (565)
|.+|.+.... .++...+..++.+++..|+.||+.-
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9888754321 2677778888889998888888610
Q ss_pred ----------------CCCCCccCCCCCCCEEEcC--CCCcEEeccCCcccccccccccccc----------------cc
Q 008431 375 ----------------PGVTLPHGHLKSSNVLLDN--AYEPLLTDYALVPIVNKEHAQLHMV----------------AY 420 (565)
Q Consensus 375 ----------------~~~~ivHrDlkp~NILl~~--~~~~kl~DfGla~~~~~~~~~~~t~----------------~y 420 (565)
.+..++|+|++|.||++++ ...+.|+||+.+............. .|
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1135799999999999988 5567899999876543221100000 12
Q ss_pred --cC-CCccCCCCCCcchhHHHHHHHHHHHHcCCCCcc
Q 008431 421 --KS-PEFNQTDGVTRKTDVWSLGILILELLTGKFPAN 455 (565)
Q Consensus 421 --~a-PE~~~~~~~~~~~DvwS~Gvil~el~tg~~p~~ 455 (565)
.. |+... ......+.|++|.++|++.+|..+|.
T Consensus 253 ~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 11110 01123588999999999999998864
No 391
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.93 E-value=8.5e-11 Score=121.31 Aligned_cols=128 Identities=22% Similarity=0.312 Sum_probs=101.1
Q ss_pred CCCcEEEcccCcCc-cCCCc----ccc-cccceeeccccccccc----CCcchhcCCCCccEEEccCCcCc----ccCCc
Q 008431 16 PGLRSLSFINNSFD-GPMPS----VGK-LTLRALYLSLNKFTGE----IPSDAFAGMDQLKKVHLARNHFS----GQIPK 81 (565)
Q Consensus 16 ~~L~~L~l~~N~l~-~~~p~----~~~-~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~l~~N~l~----g~~p~ 81 (565)
++|+.|+|++|+|+ +.+|. +.. .+|+.|+|++|+|+.. +.+..+..+++|+.|+|++|.|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 89999999999998 44443 222 3799999999999821 22324788999999999999996 67899
Q ss_pred cccCCCCCCEEeccCCcCCCC----CCC----CCCCCCCEEEcccCCCcc----CCCccc----cCCCCCcccCCCCC
Q 008431 82 SLAGLQKLLQLNLEGNSFQGK----IPD----FPLAHLTLLDLSYNQLVG----RIPDTL----SNFDATSFQGNKGL 143 (565)
Q Consensus 82 ~~~~l~~L~~L~l~~N~l~g~----~p~----~~~~~L~~l~ls~N~l~g----~~p~~~----~~~~~~~~~~n~~~ 143 (565)
.+..+++|+.|+|++|.+++. +|. ..+++|+.|+|++|++++ .+|..+ .++....+.+|+..
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 999999999999999999875 333 237899999999999998 477654 45666677777644
No 392
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.91 E-value=1.7e-10 Score=116.35 Aligned_cols=114 Identities=21% Similarity=0.318 Sum_probs=86.1
Q ss_pred hhcCCC--CCCcEEEcccCcCccCCCcccc-cccceeeccccccccc-CCcchhcCCCCccEEEccCCcCcccCCccccC
Q 008431 10 DTLSRL--PGLRSLSFINNSFDGPMPSVGK-LTLRALYLSLNKFTGE-IPSDAFAGMDQLKKVHLARNHFSGQIPKSLAG 85 (565)
Q Consensus 10 ~~~~~l--~~L~~L~l~~N~l~~~~p~~~~-~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 85 (565)
..+..+ ++|+.|++++|.+.+.++.... .+|+.|+|++|.+++. +|. .+..+++|++|+|++|.+++..|..++.
T Consensus 62 ~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~l~~ 140 (336)
T 2ast_B 62 DVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHG-ILSQCSKLQNLSLEGLRLSDPIVNTLAK 140 (336)
T ss_dssp HHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHH-HHTTBCCCSEEECTTCBCCHHHHHHHTT
T ss_pred HHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHH-HHhhCCCCCEEeCcCcccCHHHHHHHhc
Confidence 344455 7888888888888887775443 3688888888888755 554 4788888888888888888888888888
Q ss_pred CCCCCEEeccCC-cCCCC-CCCC--CCCCCCEEEcccC-CCccC
Q 008431 86 LQKLLQLNLEGN-SFQGK-IPDF--PLAHLTLLDLSYN-QLVGR 124 (565)
Q Consensus 86 l~~L~~L~l~~N-~l~g~-~p~~--~~~~L~~l~ls~N-~l~g~ 124 (565)
+++|++|+|++| .+++. ++.. .+++|+.|++++| .+++.
T Consensus 141 ~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~ 184 (336)
T 2ast_B 141 NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK 184 (336)
T ss_dssp CTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH
Confidence 888888888888 67652 3432 5678888888888 87753
No 393
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.90 E-value=1.2e-10 Score=117.68 Aligned_cols=129 Identities=18% Similarity=0.193 Sum_probs=84.9
Q ss_pred cCCCCCCcEEEcccCcCccC-CCc-cc-ccccceeecccccccccCCcchhcCCCCccEEEccCC-cCccc-CCccccCC
Q 008431 12 LSRLPGLRSLSFINNSFDGP-MPS-VG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARN-HFSGQ-IPKSLAGL 86 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~-~p~-~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N-~l~g~-~p~~~~~l 86 (565)
+..+++|+.|+|++|.+++. +|. +. ..+|+.|+|++|++++.+|.. +..+++|++|+|++| .+++. +|..+.++
T Consensus 89 ~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~-l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~ 167 (336)
T 2ast_B 89 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQTLLSSC 167 (336)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHH-HTTCTTCSEEECTTCBSCCHHHHHHHHHHC
T ss_pred hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHH-HhcCCCCCEEECCCCCCCCHHHHHHHHhcC
Confidence 55788888888888888754 442 22 236888888888887666653 777888888888888 67753 66667778
Q ss_pred CCCCEEeccCC-cCCCC-CCCC--CCC-CCCEEEcccC--CCc-cCCCccc---cCCCCCcccCCC
Q 008431 87 QKLLQLNLEGN-SFQGK-IPDF--PLA-HLTLLDLSYN--QLV-GRIPDTL---SNFDATSFQGNK 141 (565)
Q Consensus 87 ~~L~~L~l~~N-~l~g~-~p~~--~~~-~L~~l~ls~N--~l~-g~~p~~~---~~~~~~~~~~n~ 141 (565)
++|+.|+|++| .+++. ++.. .++ +|+.|++++| .++ +.+|..+ .++....+.+|.
T Consensus 168 ~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 168 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred CCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 88888888888 77753 2321 455 7777777777 444 3333332 334444445543
No 394
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.89 E-value=4.2e-09 Score=106.07 Aligned_cols=92 Identities=20% Similarity=0.137 Sum_probs=74.6
Q ss_pred ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCC-EEeccCCcCCCCCCCC--CCCCCCEEE
Q 008431 39 TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLL-QLNLEGNSFQGKIPDF--PLAHLTLLD 115 (565)
Q Consensus 39 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~g~~p~~--~~~~L~~l~ 115 (565)
+|+.|+|++|+++ .||+.+|.++++|+.|+|++| ++..-+.+|.++.+|+ .|+|.+ +++...+.. .+.+|+.|+
T Consensus 227 ~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 227 NLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 6889999999998 899999999999999999988 7777788899999999 999988 666444432 678999999
Q ss_pred cccCCCccCCCccccCCC
Q 008431 116 LSYNQLVGRIPDTLSNFD 133 (565)
Q Consensus 116 ls~N~l~g~~p~~~~~~~ 133 (565)
+++|+++..-+.+|.+..
T Consensus 304 l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGV 321 (329)
T ss_dssp ECSSCCCEECTTTTCTTC
T ss_pred eCCCccCccchhhhcCCc
Confidence 999988866566665443
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.67 E-value=9e-10 Score=116.16 Aligned_cols=132 Identities=20% Similarity=0.178 Sum_probs=94.0
Q ss_pred hhcCCCCCCcEEEcccCcCccC----CC-ccc-ccccceeecccccccccCCcc----hhcCCCCccEEEccCCcCccc-
Q 008431 10 DTLSRLPGLRSLSFINNSFDGP----MP-SVG-KLTLRALYLSLNKFTGEIPSD----AFAGMDQLKKVHLARNHFSGQ- 78 (565)
Q Consensus 10 ~~~~~l~~L~~L~l~~N~l~~~----~p-~~~-~~~L~~L~Ls~N~l~g~ip~~----~~~~l~~L~~L~l~~N~l~g~- 78 (565)
..+..+++|+.|+|++|.++.. ++ .+. ..+|+.|+|++|.+++..+.. .....++|+.|+|++|.+++.
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 3445688999999999999863 23 222 236999999999987432221 122346899999999999865
Q ss_pred ---CCccccCCCCCCEEeccCCcCCCCCCCC-------CCCCCCEEEcccCCCcc----CCCccc---cCCCCCcccCCC
Q 008431 79 ---IPKSLAGLQKLLQLNLEGNSFQGKIPDF-------PLAHLTLLDLSYNQLVG----RIPDTL---SNFDATSFQGNK 141 (565)
Q Consensus 79 ---~p~~~~~l~~L~~L~l~~N~l~g~~p~~-------~~~~L~~l~ls~N~l~g----~~p~~~---~~~~~~~~~~n~ 141 (565)
+|..+..+++|+.|+|++|.+++..+.. ..++|+.|++++|++++ .+|..+ .++....+.+|+
T Consensus 330 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 330 CSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 5677788899999999999887643321 25689999999999985 566554 345555666764
No 396
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=2.5e-07 Score=92.55 Aligned_cols=134 Identities=12% Similarity=0.066 Sum_probs=98.3
Q ss_pred cceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCC---C-CccceEEEEEecCceEEEEeccCC
Q 008431 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH---P-NLLPLIAFYYRKEEKLLVSDFVPN 333 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~-niv~l~~~~~~~~~~~lv~E~~~~ 333 (565)
.+.++.|....||+. +..+++|..... .....+.+|..+++.+.+ + .+.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 467899999999988 777888876432 223568899998888866 1 23444444 677999999999
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-------------------------------------
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPG------------------------------------- 376 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~------------------------------------- 376 (565)
.++...... .++...+..++.+++..|+.||+.-.+
T Consensus 112 ~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 112 ERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp BCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 888643321 266677778888888888888854221
Q ss_pred ----------------------CCCccCCCCCCCEEEcCCCCcEEeccCCcccc
Q 008431 377 ----------------------VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIV 408 (565)
Q Consensus 377 ----------------------~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~ 408 (565)
..++|+|++|.|||++.+..+.|.||+.+...
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 13489999999999998666799999987553
No 397
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.57 E-value=2.8e-09 Score=112.35 Aligned_cols=114 Identities=20% Similarity=0.258 Sum_probs=83.5
Q ss_pred cCCCCCCcEEEcccCcCccC----CCc-cc-ccccceeecccccccccCCcchhcCCC----CccEEEccCCcCcc----
Q 008431 12 LSRLPGLRSLSFINNSFDGP----MPS-VG-KLTLRALYLSLNKFTGEIPSDAFAGMD----QLKKVHLARNHFSG---- 77 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~----~p~-~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~----~L~~L~l~~N~l~g---- 77 (565)
+..+++|+.|+|++|.++.. ++. +. ..+|+.|+|++|+++...+...+..+. +|++|+|++|+++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 56788899999999988742 221 22 236899999999887544444455566 69999999999883
Q ss_pred cCCccccCCCCCCEEeccCCcCCCCCCC-------CCCCCCCEEEcccCCCccCC
Q 008431 78 QIPKSLAGLQKLLQLNLEGNSFQGKIPD-------FPLAHLTLLDLSYNQLVGRI 125 (565)
Q Consensus 78 ~~p~~~~~l~~L~~L~l~~N~l~g~~p~-------~~~~~L~~l~ls~N~l~g~~ 125 (565)
.+|..|..+++|++|+|++|.+++..+. ....+|+.|++++|++++..
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH
Confidence 5688888899999999999988753322 13457999999999887643
No 398
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.56 E-value=2.1e-07 Score=91.61 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=60.2
Q ss_pred cceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCC---CccceEEEEEecCceEEEEeccCCC
Q 008431 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP---NLLPLIAFYYRKEEKLLVSDFVPNG 334 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~E~~~~g 334 (565)
.+.||.|.++.||++...+|..+++|+...........|.+|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 3579999999999999888999999997543333456799999999999875 467777653 479999999998
Q ss_pred CH
Q 008431 335 SL 336 (565)
Q Consensus 335 sL 336 (565)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=3.5e-07 Score=91.89 Aligned_cols=63 Identities=11% Similarity=0.083 Sum_probs=35.7
Q ss_pred ccChhhcCC--------CCCCcEEEcccCcCccCCC-cc-cccccceeecccccccccCCcchhcCCCCccEEEc
Q 008431 6 MIDVDTLSR--------LPGLRSLSFINNSFDGPMP-SV-GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHL 70 (565)
Q Consensus 6 ~i~~~~~~~--------l~~L~~L~l~~N~l~~~~p-~~-~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l 70 (565)
+||..+|.+ +++|+.|+|++ +++...+ .+ +..+|+.|+|++|.++ .|++++|.++.++..+.+
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPL 155 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECT
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecC
Confidence 466666666 77777777776 5654333 22 2235777777777665 555555555444444433
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=1.2e-08 Score=98.69 Aligned_cols=84 Identities=20% Similarity=0.215 Sum_probs=61.8
Q ss_pred eecccccccccCCc---chhcCCCCccEEEccCCcCcc--cCCccccCCCCCCEEeccCCcCCCCCCCCCCC--CCCEEE
Q 008431 43 LYLSLNKFTGEIPS---DAFAGMDQLKKVHLARNHFSG--QIPKSLAGLQKLLQLNLEGNSFQGKIPDFPLA--HLTLLD 115 (565)
Q Consensus 43 L~Ls~N~l~g~ip~---~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~--~L~~l~ 115 (565)
++++.|+.. .++. .+..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.-.-..+. +|+.|+
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~ 226 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELW 226 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEE
Confidence 778888543 3331 123567889999999999987 55677788999999999999998752211223 899999
Q ss_pred cccCCCccCCCc
Q 008431 116 LSYNQLVGRIPD 127 (565)
Q Consensus 116 ls~N~l~g~~p~ 127 (565)
|++|.+++.+|.
T Consensus 227 L~~Npl~~~~~~ 238 (267)
T 3rw6_A 227 LDGNSLCDTFRD 238 (267)
T ss_dssp CTTSTTGGGCSS
T ss_pred ccCCcCccccCc
Confidence 999999887763
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.39 E-value=6.7e-09 Score=106.33 Aligned_cols=107 Identities=20% Similarity=0.207 Sum_probs=55.9
Q ss_pred CCCcEEEcccCcCccCCC-ccc--ccccceeecccccccccCCcchh-----cCCCCccEEEccCCcCcc----cCCccc
Q 008431 16 PGLRSLSFINNSFDGPMP-SVG--KLTLRALYLSLNKFTGEIPSDAF-----AGMDQLKKVHLARNHFSG----QIPKSL 83 (565)
Q Consensus 16 ~~L~~L~l~~N~l~~~~p-~~~--~~~L~~L~Ls~N~l~g~ip~~~~-----~~l~~L~~L~l~~N~l~g----~~p~~~ 83 (565)
++|+.|+|++|.|+.... .+. ..+|+.|+|++|+|+.. ....+ ...++|++|+|++|.|+. .++..+
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~-~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPE-ACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHH-HHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHH-HHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 466666666666643211 111 12466666666666522 11112 234566677777776653 233444
Q ss_pred cCCCCCCEEeccCCcCCCCC----CC--CCCCCCCEEEcccCCCcc
Q 008431 84 AGLQKLLQLNLEGNSFQGKI----PD--FPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~----p~--~~~~~L~~l~ls~N~l~g 123 (565)
..+++|++|+|++|.|+..- +. ...++|+.|+|++|.|+.
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 55666777777777665321 11 123466777777776653
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.38 E-value=2.3e-08 Score=102.31 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=83.2
Q ss_pred CCCCCcEEEcccCcCccCCC-cc------cccccceeeccccccccc----CCcchhcCCCCccEEEccCCcCccc----
Q 008431 14 RLPGLRSLSFINNSFDGPMP-SV------GKLTLRALYLSLNKFTGE----IPSDAFAGMDQLKKVHLARNHFSGQ---- 78 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~~~~p-~~------~~~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~---- 78 (565)
.+++|+.|+|++|.|+.... .+ ...+|+.|+|++|.|+.. ++ .++..+++|++|+|++|.|+..
T Consensus 124 ~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~-~~L~~~~~L~~L~Ls~N~l~~~g~~~ 202 (372)
T 3un9_A 124 VFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLM-EGLAGNTSVTHLSLLHTGLGDEGLEL 202 (372)
T ss_dssp HHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHH-HHHHTCSSCCEEECTTSSCHHHHHHH
T ss_pred HHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHH-HHHhcCCCcCEEeCCCCCCCcHHHHH
Confidence 35689999999999974322 11 134699999999999731 22 2357789999999999999752
Q ss_pred CCccccCCCCCCEEeccCCcCCCCCCC----C--CCCCCCEEEcccCCCccC
Q 008431 79 IPKSLAGLQKLLQLNLEGNSFQGKIPD----F--PLAHLTLLDLSYNQLVGR 124 (565)
Q Consensus 79 ~p~~~~~l~~L~~L~l~~N~l~g~~p~----~--~~~~L~~l~ls~N~l~g~ 124 (565)
++..+...++|+.|+|++|.++..-.. . ..++|+.|+|++|.|+..
T Consensus 203 L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 203 LAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 356678888999999999999753211 1 357899999999998754
No 403
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36 E-value=2.5e-06 Score=84.69 Aligned_cols=136 Identities=15% Similarity=0.067 Sum_probs=92.6
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCC---CccceEEEEE-ecCceEEEEeccCCC
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP---NLLPLIAFYY-RKEEKLLVSDFVPNG 334 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~E~~~~g 334 (565)
+.++.|....||+. |..+++|.... ......+.+|..+|+.+.+. .+.+.+.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 46788888899987 67788888532 22346789999999998753 2456666664 344578999999998
Q ss_pred CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhC----------------------------------------
Q 008431 335 SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEF---------------------------------------- 374 (565)
Q Consensus 335 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~---------------------------------------- 374 (565)
.+.+.... .++...+..++.+++..|+.||+..
T Consensus 99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 87663211 1344455555555555555555321
Q ss_pred ----------------CCCCCccCCCCCCCEEEcC---CCC-cEEeccCCccc
Q 008431 375 ----------------PGVTLPHGHLKSSNVLLDN---AYE-PLLTDYALVPI 407 (565)
Q Consensus 375 ----------------~~~~ivHrDlkp~NILl~~---~~~-~kl~DfGla~~ 407 (565)
.+..++|+|++|.|||++. ++. ..|.||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2225699999999999987 455 47999997654
No 404
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.33 E-value=2.5e-06 Score=82.84 Aligned_cols=136 Identities=20% Similarity=0.234 Sum_probs=92.4
Q ss_pred eecccCce-eEEEEEEe-CCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-CCCccceEEEEEecCceEEEEeccCCCCH
Q 008431 260 VLGSGSFG-SSYKAVLL-TGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-HPNLLPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 260 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
.+..|..| .||+.... ++..+++|.-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556555 68987744 4567888876532 3456888999888774 22366788888888899999999999888
Q ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh-------------------------------------------
Q 008431 337 ANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKE------------------------------------------- 373 (565)
Q Consensus 337 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~------------------------------------------- 373 (565)
.+...... .....++.+++..|+-||..
T Consensus 108 ~~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 108 FQVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 76543211 12233445555555555531
Q ss_pred --------C---CCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 374 --------F---PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 374 --------~---~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
. .+..++|+|+.+.|||+++++.+-|.||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1 112378999999999999877677999987643
No 405
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=1.7e-07 Score=90.58 Aligned_cols=75 Identities=29% Similarity=0.385 Sum_probs=56.7
Q ss_pred cccceeecccccccc--cCCcchhcCCCCccEEEccCCcCcccCCccccCCC--CCCEEeccCCcCCCCCCCC-------
Q 008431 38 LTLRALYLSLNKFTG--EIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQ--KLLQLNLEGNSFQGKIPDF------- 106 (565)
Q Consensus 38 ~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~g~~p~~------- 106 (565)
..|+.|+||+|+|++ .+|. .+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|+.
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~-~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSS-IVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTT-HHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchh-HHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 368999999999985 4443 467889999999999999865 3344444 8999999999998877741
Q ss_pred --CCCCCCEEE
Q 008431 107 --PLAHLTLLD 115 (565)
Q Consensus 107 --~~~~L~~l~ 115 (565)
.+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 467788776
No 406
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=2.9e-06 Score=86.37 Aligned_cols=73 Identities=10% Similarity=0.054 Sum_probs=54.4
Q ss_pred cceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCC--ccceEEEEEec-CceEEEEeccCCC
Q 008431 258 AEVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN--LLPLIAFYYRK-EEKLLVSDFVPNG 334 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~E~~~~g 334 (565)
.+.++.|....+|+... ++..+++|..... ..+.+|..+++.+.... +.+++.++... +..|+||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35688999999998875 5778888876432 35888999988886543 45667776654 5689999999976
Q ss_pred CH
Q 008431 335 SL 336 (565)
Q Consensus 335 sL 336 (565)
++
T Consensus 120 ~l 121 (362)
T 3ovc_A 120 TL 121 (362)
T ss_dssp ET
T ss_pred Cc
Confidence 54
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.20 E-value=1.9e-07 Score=101.55 Aligned_cols=128 Identities=13% Similarity=0.118 Sum_probs=77.8
Q ss_pred CCCCCCcEEEcccCcCccCCC-ccc--ccccceeecc----cccccccCCcc-----hhcCCCCccEEEccCC--cCccc
Q 008431 13 SRLPGLRSLSFINNSFDGPMP-SVG--KLTLRALYLS----LNKFTGEIPSD-----AFAGMDQLKKVHLARN--HFSGQ 78 (565)
Q Consensus 13 ~~l~~L~~L~l~~N~l~~~~p-~~~--~~~L~~L~Ls----~N~l~g~ip~~-----~~~~l~~L~~L~l~~N--~l~g~ 78 (565)
..+++|+.|+|+.|.+++..+ .+. ..+|+.|+|+ .|++++ .|.+ .+.++++|+.|+|+++ .+++.
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~-~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~ 453 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD-LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDL 453 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS-CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC-chHHHHHHHHHHhCCCCCEEEEecCCCCccHH
Confidence 357888888888888876443 222 2358888885 677774 2221 2556777888888643 35555
Q ss_pred CCccccC-CCCCCEEeccCCcCCCC-CCC--CCCCCCCEEEcccCCCccCC-Cc---cccCCCCCcccCCC
Q 008431 79 IPKSLAG-LQKLLQLNLEGNSFQGK-IPD--FPLAHLTLLDLSYNQLVGRI-PD---TLSNFDATSFQGNK 141 (565)
Q Consensus 79 ~p~~~~~-l~~L~~L~l~~N~l~g~-~p~--~~~~~L~~l~ls~N~l~g~~-p~---~~~~~~~~~~~~n~ 141 (565)
.+..++. +++|+.|+|++|.+++. ++. ..+++|+.|+|++|.+++.. +. .+.++....+.+|.
T Consensus 454 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 454 GLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 5444443 67788888888877652 222 24677888888888775432 22 13344555556654
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=2e-06 Score=87.23 Aligned_cols=79 Identities=5% Similarity=-0.021 Sum_probs=53.5
Q ss_pred cee-cccCceeEEEEEEe-------CCCeeEEEEeeccC---ccCHHHHHHHHHHHhcCCC---CCccceEEEEEec---
Q 008431 259 EVL-GSGSFGSSYKAVLL-------TGPAMVVKRFRQMS---NVGKEDFHEHMTRLGSLSH---PNLLPLIAFYYRK--- 321 (565)
Q Consensus 259 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~--- 321 (565)
+.| +.|....+|+.... ++..+++|...... ......+.+|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 467 88889999988754 26678888765322 1123457788888887742 2466777776554
Q ss_pred CceEEEEeccCCCCHH
Q 008431 322 EEKLLVSDFVPNGSLA 337 (565)
Q Consensus 322 ~~~~lv~E~~~~gsL~ 337 (565)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999886543
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.10 E-value=3.7e-07 Score=83.57 Aligned_cols=111 Identities=13% Similarity=0.228 Sum_probs=81.6
Q ss_pred hcCCCCCCcEEEcccC-cCccCC----C-cc-cccccceeeccccccccc----CCcchhcCCCCccEEEccCCcCccc-
Q 008431 11 TLSRLPGLRSLSFINN-SFDGPM----P-SV-GKLTLRALYLSLNKFTGE----IPSDAFAGMDQLKKVHLARNHFSGQ- 78 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N-~l~~~~----p-~~-~~~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~l~~N~l~g~- 78 (565)
.+...+.|+.|+|++| .|...- . .+ ...+|+.|+|++|+|+.. |. +++...+.|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~-~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALA-EMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHH-HHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHH-HHHHhCCCcCEEECcCCcCCHHH
Confidence 4667889999999999 887321 1 11 123699999999998732 22 2355568899999999999853
Q ss_pred ---CCccccCCCCCCEEec--cCCcCCCCCCC----C--CCCCCCEEEcccCCCc
Q 008431 79 ---IPKSLAGLQKLLQLNL--EGNSFQGKIPD----F--PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 79 ---~p~~~~~l~~L~~L~l--~~N~l~g~~p~----~--~~~~L~~l~ls~N~l~ 122 (565)
+...+...++|++|+| ++|.++..-.. . ..++|+.|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566788889999999 88998743211 1 3478999999999874
No 410
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.09 E-value=1e-05 Score=83.37 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=50.6
Q ss_pred ccChhhcCCCCCCcEEEcccCcCccCCC-cccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcccc
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFDGPMP-SVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLA 84 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 84 (565)
.|+..+|.++++|+.++|++|+++.... .+...+|+.+.|..| ++ .|+..+|.++++|+.++|..| ++..-..+|.
T Consensus 170 ~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~ 246 (401)
T 4fdw_A 170 QLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFR 246 (401)
T ss_dssp EECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTT
T ss_pred EehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCccccccc
Confidence 3444455555555555555555543322 122234555555422 44 455555555555555555443 3333344444
Q ss_pred CCCCCCEEeccCCcCCCCCCC--CCCCCCCEEEcccCCCc
Q 008431 85 GLQKLLQLNLEGNSFQGKIPD--FPLAHLTLLDLSYNQLV 122 (565)
Q Consensus 85 ~l~~L~~L~l~~N~l~g~~p~--~~~~~L~~l~ls~N~l~ 122 (565)
+ .+|+.+.|. |.++...+. ..+.+|+.+++.+|.+.
T Consensus 247 ~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 247 E-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp T-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCC
T ss_pred c-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCcccc
Confidence 4 445555552 223322111 13455566665555543
No 411
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.03 E-value=1.4e-05 Score=82.34 Aligned_cols=78 Identities=24% Similarity=0.225 Sum_probs=37.7
Q ss_pred ccceeecccccccccCCcchhcCCCCccEEEccCCcCc-----ccCCccccCCCCCCEEeccCCcCCCCCCCC--CCCCC
Q 008431 39 TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFS-----GQIPKSLAGLQKLLQLNLEGNSFQGKIPDF--PLAHL 111 (565)
Q Consensus 39 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~-----g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~--~~~~L 111 (565)
+|+.+.| .|+++ .|+..+|.++++|+.++|.+|.+. ...+.+|.+|++|+.++|.+ .++..-... .+.+|
T Consensus 249 ~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 249 GITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSC
T ss_pred CccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCc
Confidence 4555555 23344 455555555555555555555443 23344555555555555552 233221111 34555
Q ss_pred CEEEcccC
Q 008431 112 TLLDLSYN 119 (565)
Q Consensus 112 ~~l~ls~N 119 (565)
+.++|..|
T Consensus 326 ~~l~lp~~ 333 (401)
T 4fdw_A 326 TQLTIPAN 333 (401)
T ss_dssp CEEEECTT
T ss_pred cEEEECcc
Confidence 55555433
No 412
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.00 E-value=2.7e-07 Score=100.41 Aligned_cols=114 Identities=17% Similarity=0.168 Sum_probs=79.4
Q ss_pred CCCCCcEEEcccCcCccCCC-cccc---cccceeeccccc-ccc-cCCcchhcCCCCccEEEccCCcCccc----CCccc
Q 008431 14 RLPGLRSLSFINNSFDGPMP-SVGK---LTLRALYLSLNK-FTG-EIPSDAFAGMDQLKKVHLARNHFSGQ----IPKSL 83 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~~~~p-~~~~---~~L~~L~Ls~N~-l~g-~ip~~~~~~l~~L~~L~l~~N~l~g~----~p~~~ 83 (565)
.+++|+.|+|++|.+++..+ .+.. .+|+.|+|++|. ++. .++ ....++++|++|+|++|.+++. ++..+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLL-SIVTHCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHH-HHHHHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHH-HHHhhCCCCCEEECccccccCcchhHHHHHH
Confidence 67888899999888775443 2322 238889988876 221 111 2234788999999999988765 44556
Q ss_pred cCCCCCCEEeccCCcCCCCCCC----C--CCCCCCEEEcccCCCccCCCccc
Q 008431 84 AGLQKLLQLNLEGNSFQGKIPD----F--PLAHLTLLDLSYNQLVGRIPDTL 129 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~p~----~--~~~~L~~l~ls~N~l~g~~p~~~ 129 (565)
.++++|+.|+|++|.+++..+. . .+++|+.|++++|.+.+ +|..+
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 7788999999999998743221 1 46889999999998876 44433
No 413
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=3.3e-05 Score=79.48 Aligned_cols=75 Identities=12% Similarity=0.157 Sum_probs=49.8
Q ss_pred cceecccCceeEEEEEEe-CCCeeEEEEeeccCc-------cCHHHHHHHHHHHhcCCC--CCcc-ceEEEEEecCceEE
Q 008431 258 AEVLGSGSFGSSYKAVLL-TGPAMVVKRFRQMSN-------VGKEDFHEHMTRLGSLSH--PNLL-PLIAFYYRKEEKLL 326 (565)
Q Consensus 258 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~l 326 (565)
.+.||.|.++.||++... ++..+++|....... ...+.+..|.++++.+.. |..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999743 567899997653211 234567888888887642 3444 44433 4566789
Q ss_pred EEeccCCC
Q 008431 327 VSDFVPNG 334 (565)
Q Consensus 327 v~E~~~~g 334 (565)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 414
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=5.4e-05 Score=75.88 Aligned_cols=143 Identities=17% Similarity=0.194 Sum_probs=78.9
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcC-----CCCCccceE-E--EEEecCceEEEEec
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSL-----SHPNLLPLI-A--FYYRKEEKLLVSDF 330 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~-~--~~~~~~~~~lv~E~ 330 (565)
+.|+.|..+.||+....+| .+++|..... ..++..|..+++.+ ..|.++... | +....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677889999886554 4888887641 23344455544443 234444311 1 12345678999999
Q ss_pred cCCCCHH--------------HHHhhcCCCC--C-------CCCCHHHHH------------------------------
Q 008431 331 VPNGSLA--------------NLLHVRRAPG--Q-------PGLDWPIRL------------------------------ 357 (565)
Q Consensus 331 ~~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~~------------------------------ 357 (565)
++|..+. ..++...... . ..-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986431 1122111100 0 012343210
Q ss_pred -HHHHHHHHHHHHHHh--------h-CCCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 358 -KIIKGVAKGLAYLYK--------E-FPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 358 -~i~~~ia~gL~ylH~--------~-~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
.+...+..++.+|+. . ..+..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223446667763 1 013379999999999999878889999998753
No 415
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.80 E-value=0.00014 Score=71.17 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=54.0
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCC---CccceEEEEEecCceEEEEeccCCCC
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHP---NLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
+.+|.|..+.||+....+|+.+++|+...........|..|...|+.+.-. -+.+++++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 568999999999999999999999987654444445688899988877422 23444443 24579999998764
No 416
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.74 E-value=4.2e-06 Score=90.85 Aligned_cols=125 Identities=11% Similarity=0.107 Sum_probs=85.8
Q ss_pred CCCCCcEEEcccCcCccCCC-ccc--ccccceeecc--c----ccccccCCcc-----hhcCCCCccEEEccCCcCcccC
Q 008431 14 RLPGLRSLSFINNSFDGPMP-SVG--KLTLRALYLS--L----NKFTGEIPSD-----AFAGMDQLKKVHLARNHFSGQI 79 (565)
Q Consensus 14 ~l~~L~~L~l~~N~l~~~~p-~~~--~~~L~~L~Ls--~----N~l~g~ip~~-----~~~~l~~L~~L~l~~N~l~g~~ 79 (565)
.+++|+.|.++.|.+++... .+. ..+|+.|+|+ + |+++ ..|.+ .+.++++|+.|+|++ .+++..
T Consensus 370 ~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 370 GCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred hchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 47899999999999986544 232 3479999998 4 6666 33322 256788999999977 677665
Q ss_pred CccccC-CCCCCEEeccCCcCCCCCCC---CCCCCCCEEEcccCCCccCCCc----cccCCCCCcccCC
Q 008431 80 PKSLAG-LQKLLQLNLEGNSFQGKIPD---FPLAHLTLLDLSYNQLVGRIPD----TLSNFDATSFQGN 140 (565)
Q Consensus 80 p~~~~~-l~~L~~L~l~~N~l~g~~p~---~~~~~L~~l~ls~N~l~g~~p~----~~~~~~~~~~~~n 140 (565)
+..++. +++|+.|+|++|.+++..+. ..+++|+.|+|++|.+++..+. .+.++....+.+|
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 566665 88899999999998654332 1468899999999998643322 2334444555554
No 417
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.65 E-value=1.6e-05 Score=86.24 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=63.2
Q ss_pred hhcCCCCCCcEEEcccCcCc---cCCCc------------c--cccccceeecccccccccCCcchhcCCCCccEEEccC
Q 008431 10 DTLSRLPGLRSLSFINNSFD---GPMPS------------V--GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLAR 72 (565)
Q Consensus 10 ~~~~~l~~L~~L~l~~N~l~---~~~p~------------~--~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~ 72 (565)
..+..+++|+.|+|++|... +..|. + ...+|+.|+|++|.+++..+......+++|+.|+|++
T Consensus 60 ~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~ 139 (594)
T 2p1m_B 60 TVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSS 139 (594)
T ss_dssp HHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCC
Confidence 34556677777777776532 11110 0 1125777777777776554443222567777777777
Q ss_pred C-cCccc-CCccccCCCCCCEEeccCCcCCCCCCCC------CCCCCCEEEcccCC
Q 008431 73 N-HFSGQ-IPKSLAGLQKLLQLNLEGNSFQGKIPDF------PLAHLTLLDLSYNQ 120 (565)
Q Consensus 73 N-~l~g~-~p~~~~~l~~L~~L~l~~N~l~g~~p~~------~~~~L~~l~ls~N~ 120 (565)
| .++.. ++..+.++++|++|+|++|.+++..+.. .+++|+.|++++|.
T Consensus 140 ~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 140 CEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA 195 (594)
T ss_dssp CEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC
T ss_pred cCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC
Confidence 7 44422 4444456777777777777765533221 35567777777765
No 418
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.64 E-value=0.00019 Score=71.08 Aligned_cols=74 Identities=15% Similarity=0.095 Sum_probs=58.1
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC---CCCccceEEEEEecCceEEEEeccCCCC
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS---HPNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
+.|+.|.+..+|+... ++..+++|..... ....|..|...|+.+. ...+.+.+.++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 5689999999999875 5678888887542 3567888988888774 2467788888877788999999999875
Q ss_pred H
Q 008431 336 L 336 (565)
Q Consensus 336 L 336 (565)
+
T Consensus 118 ~ 118 (312)
T 3jr1_A 118 N 118 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 419
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.49 E-value=0.00049 Score=71.26 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=48.1
Q ss_pred CCCccCCCCCCCEEEcCCCCcEEeccCCcccccccccc---c--ccccccCCCccCCC---CCCcchhHHHHHHHHHHHH
Q 008431 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHAQ---L--HMVAYKSPEFNQTD---GVTRKTDVWSLGILILELL 448 (565)
Q Consensus 377 ~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~~---~--~t~~y~aPE~~~~~---~~~~~~DvwS~Gvil~el~ 448 (565)
..++|+|++|.|||++.++ +++.||+.+......... . -...|.+|+..... .-....++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 3799999999999998776 999999988654322111 0 11346666654321 1122345567888888887
Q ss_pred cCC
Q 008431 449 TGK 451 (565)
Q Consensus 449 tg~ 451 (565)
+++
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.45 E-value=2e-05 Score=71.94 Aligned_cols=89 Identities=16% Similarity=0.237 Sum_probs=66.9
Q ss_pred hcCCCCCCcEEEcccCcCccCCC-----cc-cccccceeeccccccccc----CCcchhcCCCCccEEEc--cCCcCccc
Q 008431 11 TLSRLPGLRSLSFINNSFDGPMP-----SV-GKLTLRALYLSLNKFTGE----IPSDAFAGMDQLKKVHL--ARNHFSGQ 78 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~~~p-----~~-~~~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~l--~~N~l~g~ 78 (565)
.+...++|+.|+|++|.|...-. .+ ...+|+.|+|++|.|+.. +. +++...+.|++|+| ++|.|+..
T Consensus 60 ~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~-~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 60 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV-EALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH-HGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH-HHHHhCCCceEEEecCCCCCCCHH
Confidence 45677899999999999973211 11 123699999999999742 22 23666789999999 88999753
Q ss_pred ----CCccccCCCCCCEEeccCCcCC
Q 008431 79 ----IPKSLAGLQKLLQLNLEGNSFQ 100 (565)
Q Consensus 79 ----~p~~~~~l~~L~~L~l~~N~l~ 100 (565)
+...+...++|+.|+|++|.+.
T Consensus 139 g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 139 VEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445666789999999999875
No 421
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.41 E-value=0.00018 Score=61.42 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=37.3
Q ss_pred ceeeccccccc-ccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCCcCC
Q 008431 41 RALYLSLNKFT-GEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGNSFQ 100 (565)
Q Consensus 41 ~~L~Ls~N~l~-g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 100 (565)
..++.+++.|+ ..+|.+ +. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~-lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTA-FP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSC-CC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCC-CC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 35667777665 346644 22 35777777777777666666777777777777777765
No 422
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.39 E-value=5.9e-05 Score=76.42 Aligned_cols=110 Identities=15% Similarity=0.181 Sum_probs=48.8
Q ss_pred cCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchh--cCCCCccEEEccC--CcCccc-----CCcc
Q 008431 12 LSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAF--AGMDQLKKVHLAR--NHFSGQ-----IPKS 82 (565)
Q Consensus 12 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~--~~l~~L~~L~l~~--N~l~g~-----~p~~ 82 (565)
+..+|+|+.|+|++|.-. .++.+...+|+.|+|..|.++..... .+ ..+++|+.|+|+. |...|. +...
T Consensus 168 l~~~P~L~~L~L~g~~~l-~l~~~~~~~L~~L~L~~~~l~~~~l~-~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~ 245 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNL-SIGKKPRPNLKSLEIISGGLPDSVVE-DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL 245 (362)
T ss_dssp HHTCTTCCEEEEECCBTC-BCCSCBCTTCSEEEEECSBCCHHHHH-HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG
T ss_pred HhcCCCCcEEEEeCCCCc-eeccccCCCCcEEEEecCCCChHHHH-HHHHccCCCCcEEEEeccccccccchhHHHHHHH
Confidence 344556666666555211 11222233566666665554321111 12 1456666666542 211111 0111
Q ss_pred c--cCCCCCCEEeccCCcCCCCCCC-----CCCCCCCEEEcccCCCcc
Q 008431 83 L--AGLQKLLQLNLEGNSFQGKIPD-----FPLAHLTLLDLSYNQLVG 123 (565)
Q Consensus 83 ~--~~l~~L~~L~l~~N~l~g~~p~-----~~~~~L~~l~ls~N~l~g 123 (565)
+ ..+++|+.|+|++|.++...+. ..+++|+.|+|+.|.|+.
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 2 2355666666666665432111 124556666666666553
No 423
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.34 E-value=5.1e-05 Score=76.88 Aligned_cols=107 Identities=18% Similarity=0.326 Sum_probs=74.5
Q ss_pred CCCCcEEEcccCcCccCCC-cc---cccccceeeccc--cccccc-----CCcchh--cCCCCccEEEccCCcCcccCCc
Q 008431 15 LPGLRSLSFINNSFDGPMP-SV---GKLTLRALYLSL--NKFTGE-----IPSDAF--AGMDQLKKVHLARNHFSGQIPK 81 (565)
Q Consensus 15 l~~L~~L~l~~N~l~~~~p-~~---~~~~L~~L~Ls~--N~l~g~-----ip~~~~--~~l~~L~~L~l~~N~l~g~~p~ 81 (565)
+++|+.|+|..|.++...- .+ ...+|+.|+|+. |...|. +.+ .+ ..+++|+.|+|.+|.++...+.
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~-~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP-LFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG-GSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH-HHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 7899999999988763211 12 234799999864 332222 111 12 2478999999999999754444
Q ss_pred ccc---CCCCCCEEeccCCcCCCC----CCCC--CCCCCCEEEcccCCCc
Q 008431 82 SLA---GLQKLLQLNLEGNSFQGK----IPDF--PLAHLTLLDLSYNQLV 122 (565)
Q Consensus 82 ~~~---~l~~L~~L~l~~N~l~g~----~p~~--~~~~L~~l~ls~N~l~ 122 (565)
.+. .+++|+.|+|+.|.++.. ++.. .+++|+.|+|++|.|+
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 443 478999999999999863 2221 4689999999999886
No 424
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.27 E-value=0.00033 Score=59.66 Aligned_cols=56 Identities=18% Similarity=0.329 Sum_probs=32.6
Q ss_pred EEEcccCcCc-cCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCc
Q 008431 20 SLSFINNSFD-GPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFS 76 (565)
Q Consensus 20 ~L~l~~N~l~-~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~ 76 (565)
.++.+++.|+ ..+|.....+|+.|+|++|+|+ .||.++|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 5566666665 2333222234666666666666 566666666666666666666553
No 425
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.22 E-value=0.0017 Score=64.50 Aligned_cols=144 Identities=17% Similarity=0.134 Sum_probs=80.8
Q ss_pred eecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCC--ccceEEE-----EEecCceEEEEeccC
Q 008431 260 VLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPN--LLPLIAF-----YYRKEEKLLVSDFVP 332 (565)
Q Consensus 260 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lv~E~~~ 332 (565)
.++ |....||+....+|+.+++|..... ....+.+..|..+++.+.... +.+.+.. ....+..+++|||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 7788999887667778999988632 123556777887777664212 3333332 122455688999998
Q ss_pred CCCHH-----H------H---HhhcCC--C--CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhhC-
Q 008431 333 NGSLA-----N------L---LHVRRA--P--GQPGLDWPIR----LKI---------------IKGVAKGLAYLYKEF- 374 (565)
Q Consensus 333 ~gsL~-----~------~---l~~~~~--~--~~~~l~~~~~----~~i---------------~~~ia~gL~ylH~~~- 374 (565)
|..+. . . ++.... . ....+++... ..+ ...+...+..+....
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 74321 1 1 111110 0 0112232211 001 111122233343322
Q ss_pred --CCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 375 --PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 375 --~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
.+..++|+|+++.|||++ + .+.|.||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234689999999999998 4 899999987643
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.21 E-value=0.0015 Score=64.74 Aligned_cols=145 Identities=15% Similarity=0.200 Sum_probs=79.2
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCC-----CCCccceE-E--EEEecCceEEEEec
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLS-----HPNLLPLI-A--FYYRKEEKLLVSDF 330 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lv~E~ 330 (565)
+.|+.|....+|+....+| .+++|..... ...+.+..|+.+++.+. -|.++... | +....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577888889999887555 6788887642 12345566777666553 23333210 1 11224567899999
Q ss_pred cCCCCHH--------------HHHhhcCCC-CCC---C---CCHHHHHH------------HHHHHHHHHHHHHhhCC--
Q 008431 331 VPNGSLA--------------NLLHVRRAP-GQP---G---LDWPIRLK------------IIKGVAKGLAYLYKEFP-- 375 (565)
Q Consensus 331 ~~~gsL~--------------~~l~~~~~~-~~~---~---l~~~~~~~------------i~~~ia~gL~ylH~~~~-- 375 (565)
++|..+. ..++..... ... . ..|..... +...+...++++....+
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 9875421 012211110 000 0 12332111 01124455666664422
Q ss_pred -CCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 376 -GVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 376 -~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
+..++|+|+.+.|||++++..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3468999999999999887656899998764
No 427
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.10 E-value=0.0017 Score=66.48 Aligned_cols=112 Identities=20% Similarity=0.332 Sum_probs=82.2
Q ss_pred cccChhhcCCCCCCcEEEcccCcCc-cCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFD-GPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSL 83 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~ 83 (565)
..|...+|.+++.|+.+.+.++..+ |.-.......|+.+.+. +.++ .|+..+|.++.+|+.++|..| ++..-..+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEecccccceecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 3455677888999999998766543 11111233468888886 5677 789999999999999999765 665567789
Q ss_pred cCCCCCCEEeccCCcCCCCCCC---CCCCCCCEEEcccCCC
Q 008431 84 AGLQKLLQLNLEGNSFQGKIPD---FPLAHLTLLDLSYNQL 121 (565)
Q Consensus 84 ~~l~~L~~L~l~~N~l~g~~p~---~~~~~L~~l~ls~N~l 121 (565)
.++.+|+.+.|..| ++ .++. ..+.+|+.+++.+|..
T Consensus 331 ~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred hCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 99999999999755 55 3443 2678999999988754
No 428
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.98 E-value=0.0039 Score=62.13 Aligned_cols=144 Identities=13% Similarity=0.075 Sum_probs=71.2
Q ss_pred ceecccCcee-EEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCC--CCccceEEEEEecCceEEEEeccCCCC
Q 008431 259 EVLGSGSFGS-SYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSH--PNLLPLIAFYYRKEEKLLVSDFVPNGS 335 (565)
Q Consensus 259 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~E~~~~gs 335 (565)
+.|+.|+... +|+....++..+++|....... +.+..|+.+++.+.. -.+.+++.+. .+.-+++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d--~~~g~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEE--HARGLLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEE--TTTTEEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeec--CCCCEEEEeeCCCcc
Confidence 3455554443 6666543366777765443211 234455665555532 2244566553 233478999998777
Q ss_pred HHHHHhhcC---------------------CCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHhh-
Q 008431 336 LANLLHVRR---------------------APGQPGLDWPIRL--------------------KIIKGVAKGLAYLYKE- 373 (565)
Q Consensus 336 L~~~l~~~~---------------------~~~~~~l~~~~~~--------------------~i~~~ia~gL~ylH~~- 373 (565)
+.+++.... ....+.++..... .....+...+..+...
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 765543211 0001112211100 0001112223333221
Q ss_pred -CCCCCCccCCCCCCCEEEcCC----CCcEEeccCCccc
Q 008431 374 -FPGVTLPHGHLKSSNVLLDNA----YEPLLTDYALVPI 407 (565)
Q Consensus 374 -~~~~~ivHrDlkp~NILl~~~----~~~kl~DfGla~~ 407 (565)
..+..++|+|+.+.|||++.+ ..+.|.||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123468999999999999874 6789999998754
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.93 E-value=0.0033 Score=61.71 Aligned_cols=140 Identities=9% Similarity=0.058 Sum_probs=73.6
Q ss_pred ceecccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCc-cceEEEEEecCceEEEEecc-CCCCH
Q 008431 259 EVLGSGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL-LPLIAFYYRKEEKLLVSDFV-PNGSL 336 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E~~-~~gsL 336 (565)
+.|+.|....+|+. ..+++|........ .....+|+..++.+....+ .+++++ +.+.-++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 56888999999998 56888877543211 1123457776666543233 344443 445568999999 55443
Q ss_pred HH------------------HHhhcCCCCCCCCC-HHHHHHHHH--------------HHHHHHHHHH----hhCCCCCC
Q 008431 337 AN------------------LLHVRRAPGQPGLD-WPIRLKIIK--------------GVAKGLAYLY----KEFPGVTL 379 (565)
Q Consensus 337 ~~------------------~l~~~~~~~~~~l~-~~~~~~i~~--------------~ia~gL~ylH----~~~~~~~i 379 (565)
.. .+|........... +.....+.. .+...+..+. ....+..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l 175 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA 175 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence 21 11111110000011 111111111 1111122221 11223358
Q ss_pred ccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 380 PHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 380 vHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
+|+|+.+.||+ ..++.+.++||..+..
T Consensus 176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 176 CHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp ECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eccCCCcCCEE-ECCCCEEEEecccccC
Confidence 99999999999 5667789999987654
No 430
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.90 E-value=0.0015 Score=66.90 Aligned_cols=112 Identities=17% Similarity=0.232 Sum_probs=77.4
Q ss_pred cccChhhcCCCCCCcEEEcccCcCccCCC-ccc-ccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcc
Q 008431 5 GMIDVDTLSRLPGLRSLSFINNSFDGPMP-SVG-KLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKS 82 (565)
Q Consensus 5 g~i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~-~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~ 82 (565)
..|...+|.++++|+.+.+. +.++.... .+. ..+|+.++|..| ++ .|...+|.++.+|+.+.|..+ ++-.-..+
T Consensus 277 ~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~I~~~a 352 (394)
T 4gt6_A 277 VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VTKIPESA 352 (394)
T ss_dssp CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CCBCCGGG
T ss_pred ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cCEEhHhH
Confidence 35677789999999999996 44543322 233 347999999865 77 899999999999999999765 76556789
Q ss_pred ccCCCCCCEEeccCCcCCCCCCCCCCCCCCEEEcccCCC
Q 008431 83 LAGLQKLLQLNLEGNSFQGKIPDFPLAHLTLLDLSYNQL 121 (565)
Q Consensus 83 ~~~l~~L~~L~l~~N~l~g~~p~~~~~~L~~l~ls~N~l 121 (565)
|.++++|+.+++.+|.... -......+|+.+.+..|.+
T Consensus 353 F~~C~~L~~i~~~~~~~~~-~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 353 FSNCTALNNIEYSGSRSQW-NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp GTTCTTCCEEEESSCHHHH-HTCBCCCCC----------
T ss_pred hhCCCCCCEEEECCceeeh-hhhhccCCCCEEEeCCCCE
Confidence 9999999999999986542 1123567788888877755
No 431
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.78 E-value=0.005 Score=63.77 Aligned_cols=70 Identities=10% Similarity=0.142 Sum_probs=47.5
Q ss_pred ceecccCceeEEEEEEeC--------CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCc-cceEEEEEecCceEEEEe
Q 008431 259 EVLGSGSFGSSYKAVLLT--------GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL-LPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E 329 (565)
+.|+.|....||+....+ +..+++|..... ...+.+.+|..+++.+...++ .++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 568888889999998753 467888876331 122566789888887754344 56666542 2 38999
Q ss_pred ccCCC
Q 008431 330 FVPNG 334 (565)
Q Consensus 330 ~~~~g 334 (565)
|++|.
T Consensus 153 ~l~G~ 157 (429)
T 1nw1_A 153 YIPSR 157 (429)
T ss_dssp CCCEE
T ss_pred EeCCc
Confidence 99863
No 432
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.71 E-value=0.0062 Score=61.77 Aligned_cols=56 Identities=20% Similarity=0.277 Sum_probs=30.3
Q ss_pred ccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccC
Q 008431 39 TLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEG 96 (565)
Q Consensus 39 ~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~ 96 (565)
.|+.+.+..+ ++ .|+..+|.++++|+.+.+.+|.++..-+.+|.++.+|+.+.|..
T Consensus 264 ~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 264 ALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred hhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 3555555432 33 45555556666666666655555544455555666666665543
No 433
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.51 E-value=0.0056 Score=62.59 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=17.1
Q ss_pred ccChhhcCCCCCCcEEEcccCcCc
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFD 29 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~ 29 (565)
.|+...|..+..|+.+.+..|..+
T Consensus 243 ~i~~~~f~~~~~l~~~~~~~~~~~ 266 (394)
T 4fs7_A 243 ELGKSVFYGCTDLESISIQNNKLR 266 (394)
T ss_dssp EECSSTTTTCSSCCEEEECCTTCE
T ss_pred ecccccccccccceeEEcCCCcce
Confidence 455567778888888888776543
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.44 E-value=0.01 Score=60.22 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=80.9
Q ss_pred ceecccCceeEEEEEEeC--------CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCc-cceEEEEEecCceEEEEe
Q 008431 259 EVLGSGSFGSSYKAVLLT--------GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL-LPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E 329 (565)
+.+..|....+|+....+ +..+++|..... ......+.+|..+++.+.-.++ .++++++. + .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEE
Confidence 457778888999988642 467888875332 2245667789988877742223 45665543 2 29999
Q ss_pred ccCCCCHH--------------HH---HhhcCCCCCCCC--CHHHHHHHHHHHH-------------------HHHHHHH
Q 008431 330 FVPNGSLA--------------NL---LHVRRAPGQPGL--DWPIRLKIIKGVA-------------------KGLAYLY 371 (565)
Q Consensus 330 ~~~~gsL~--------------~~---l~~~~~~~~~~l--~~~~~~~i~~~ia-------------------~gL~ylH 371 (565)
|++|..|. +. |+.......... -|....++..++. ..+.+|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 99875442 11 111111111112 2444444444332 2344443
Q ss_pred hh----CCCCCCccCCCCCCCEEEcCC----CCcEEeccCCcc
Q 008431 372 KE----FPGVTLPHGHLKSSNVLLDNA----YEPLLTDYALVP 406 (565)
Q Consensus 372 ~~----~~~~~ivHrDlkp~NILl~~~----~~~kl~DfGla~ 406 (565)
.. ..+..++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 32 223468999999999999876 688999998764
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.41 E-value=0.0024 Score=64.69 Aligned_cols=72 Identities=7% Similarity=0.098 Sum_probs=41.4
Q ss_pred ceecccCceeEEEEEEeC---------CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCc-cceEEEEEecCceEEEE
Q 008431 259 EVLGSGSFGSSYKAVLLT---------GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL-LPLIAFYYRKEEKLLVS 328 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 328 (565)
+.++.|....+|+....+ +..+++|........ ......|..+++.+...++ .++++.. .-++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec----CCcEEE
Confidence 467788888999988654 267777776432111 1123567777776643333 3565443 247899
Q ss_pred eccCCCC
Q 008431 329 DFVPNGS 335 (565)
Q Consensus 329 E~~~~gs 335 (565)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998743
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.38 E-value=0.027 Score=58.65 Aligned_cols=73 Identities=10% Similarity=0.155 Sum_probs=45.2
Q ss_pred ceecccCceeEEEEEEeC-CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCc-cceEEEEEecCceEEEEeccCCCCH
Q 008431 259 EVLGSGSFGSSYKAVLLT-GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL-LPLIAFYYRKEEKLLVSDFVPNGSL 336 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E~~~~gsL 336 (565)
+.|+.|-...+|+....+ +..+++|........ .-.-.+|..+++.+...++ .++++++ .+ .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 568888889999998754 467778776432111 1112578888888865555 4666665 22 359999987443
No 437
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.31 E-value=0.0012 Score=59.16 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=53.6
Q ss_pred cccccceeecccccccccCCcchhcCCCCccEEEccCCc-CcccCCccccCC----CCCCEEeccCCc-CCCC--CCCCC
Q 008431 36 GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNH-FSGQIPKSLAGL----QKLLQLNLEGNS-FQGK--IPDFP 107 (565)
Q Consensus 36 ~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~g~--~p~~~ 107 (565)
....|+.||||++.++. .--..+.++++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. +|.. ..-..
T Consensus 59 ~~~~L~~LDLs~~~Itd-~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~ 137 (176)
T 3e4g_A 59 DKYKIQAIDATDSCIMS-IGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHH 137 (176)
T ss_dssp TCCCEEEEEEESCCCCG-GGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGG
T ss_pred CCceEeEEeCcCCCccH-HHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhc
Confidence 34568888888888763 222336778888888888874 654322334443 368888888864 5521 00024
Q ss_pred CCCCCEEEcccCC
Q 008431 108 LAHLTLLDLSYNQ 120 (565)
Q Consensus 108 ~~~L~~l~ls~N~ 120 (565)
+++|+.|+|++..
T Consensus 138 ~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 138 FRNLKYLFLSDLP 150 (176)
T ss_dssp CTTCCEEEEESCT
T ss_pred CCCCCEEECCCCC
Confidence 6788888888764
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.28 E-value=0.081 Score=48.57 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=66.8
Q ss_pred CCHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCccccccccc
Q 008431 334 GSLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPIVNKEHA 413 (565)
Q Consensus 334 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 413 (565)
-+|.++|..+.. ++++.+++.++.|.+.+|.-+-..-. . ..+=+-|..|++..+|.+...+ ..+
T Consensus 33 vSL~eIL~~~~~----PlsEEqaWALc~Qc~~~L~~~~~~~~--~-~~~i~~~~~i~l~~dG~V~f~~-~~s-------- 96 (229)
T 2yle_A 33 LSLEEILRLYNQ----PINEEQAWAVCYQCCGSLRAAARRRQ--P-RHRVRSAAQIRVWRDGAVTLAP-AAD-------- 96 (229)
T ss_dssp EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTC--C-CCCCCSGGGEEEETTSCEEECC-C----------
T ss_pred ccHHHHHHHcCC----CcCHHHHHHHHHHHHHHHHhhhhccc--C-CceecCCcceEEecCCceeccc-ccc--------
Confidence 389999988765 39999999999999999876622100 1 1223346889999999888764 111
Q ss_pred ccccccccCCCccCCCCCCcchhHHHHHHHHHHHHcCCCC
Q 008431 414 QLHMVAYKSPEFNQTDGVTRKTDVWSLGILILELLTGKFP 453 (565)
Q Consensus 414 ~~~t~~y~aPE~~~~~~~~~~~DvwS~Gvil~el~tg~~p 453 (565)
......+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 97 ~~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 97 DAGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 11223567888763 3456788899999999998874444
No 439
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.19 E-value=0.006 Score=62.32 Aligned_cols=108 Identities=17% Similarity=0.135 Sum_probs=82.5
Q ss_pred ccChhhcCCCCCCcEEEcccCcCccCCCcccccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCccccC
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFDGPMPSVGKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAG 85 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~ 85 (565)
.|+...|..+..|+.+.+..+.+.. .......+|+.+.+..| ++ .|+..+|.++++|+.++|..+ ++-.-..+|.+
T Consensus 266 ~i~~~~F~~~~~l~~~~~~~~~i~~-~~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 341 (394)
T 4fs7_A 266 RIGGSLFYNCSGLKKVIYGSVIVPE-KTFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRG 341 (394)
T ss_dssp EECSCTTTTCTTCCEEEECSSEECT-TTTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTT
T ss_pred eeeccccccccccceeccCceeecc-ccccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccC
Confidence 4666778899999999887765432 11223347899999755 67 799999999999999999755 77566789999
Q ss_pred CCCCCEEeccCCcCCCCCCC---CCCCCCCEEEcccC
Q 008431 86 LQKLLQLNLEGNSFQGKIPD---FPLAHLTLLDLSYN 119 (565)
Q Consensus 86 l~~L~~L~l~~N~l~g~~p~---~~~~~L~~l~ls~N 119 (565)
+.+|+.++|..| ++. ++. ..+.+|+.+++..|
T Consensus 342 c~~L~~i~lp~~-l~~-I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 342 CTSLSNINFPLS-LRK-IGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTTCCEECCCTT-CCE-ECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCEEEECcc-ccE-ehHHHhhCCCCCCEEEECCC
Confidence 999999999877 553 433 26789999998765
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.03 E-value=0.0025 Score=56.93 Aligned_cols=91 Identities=8% Similarity=0.105 Sum_probs=60.6
Q ss_pred ccChhhcCCCCCCcEEEcccCcCccC-CCcc-cccccceeeccccc-ccccCCcchhcCC----CCccEEEccCCc-Ccc
Q 008431 6 MIDVDTLSRLPGLRSLSFINNSFDGP-MPSV-GKLTLRALYLSLNK-FTGEIPSDAFAGM----DQLKKVHLARNH-FSG 77 (565)
Q Consensus 6 ~i~~~~~~~l~~L~~L~l~~N~l~~~-~p~~-~~~~L~~L~Ls~N~-l~g~ip~~~~~~l----~~L~~L~l~~N~-l~g 77 (565)
.+|......+ .|+.|||+++.++.. +..+ +..+|+.|+|+++. ++.. --..+..+ ++|+.|+|+++. ++.
T Consensus 52 ~LP~~~~~~~-~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~-gL~~L~~~~~~~~~L~~L~Ls~C~~ITD 129 (176)
T 3e4g_A 52 HLPTGPLDKY-KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDG-CLERLSQLENLQKSMLEMEIISCGNVTD 129 (176)
T ss_dssp GSCCCSTTCC-CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHH-HHHHHHTCHHHHHHCCEEEEESCTTCCH
T ss_pred cCCcccCCCc-eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHH-HHHHHHhcccccCCCCEEEcCCCCcCCH
Confidence 4554333333 699999999998632 2223 33379999999985 5521 11124443 369999999974 774
Q ss_pred cCCccccCCCCCCEEeccCCc
Q 008431 78 QIPKSLAGLQKLLQLNLEGNS 98 (565)
Q Consensus 78 ~~p~~~~~l~~L~~L~l~~N~ 98 (565)
.-=..+..+++|+.|+|++..
T Consensus 130 ~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 130 KGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHHHHGGGCTTCCEEEEESCT
T ss_pred HHHHHHhcCCCCCEEECCCCC
Confidence 323357789999999999874
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.92 E-value=0.012 Score=59.66 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=62.0
Q ss_pred cChhhcCCCCCCcEEEcccCcCccCCC-cc-cccccceeecccccccccCCcchhcCCCCccEEEccCCcCcccCCcccc
Q 008431 7 IDVDTLSRLPGLRSLSFINNSFDGPMP-SV-GKLTLRALYLSLNKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLA 84 (565)
Q Consensus 7 i~~~~~~~l~~L~~L~l~~N~l~~~~p-~~-~~~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~ 84 (565)
|+..+|.++.+|+.+.+..+ +..... .+ +..+|+.+.+.+|.++ .|+..+|.++.+|+.+.|..| ++-.-..+|.
T Consensus 254 I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 330 (379)
T 4h09_A 254 IGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK 330 (379)
T ss_dssp ECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred eCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh
Confidence 34444555555555555433 221111 12 2347999999999998 899999999999999999765 7655577899
Q ss_pred CCCCCCEEeccCC
Q 008431 85 GLQKLLQLNLEGN 97 (565)
Q Consensus 85 ~l~~L~~L~l~~N 97 (565)
++++|+.+.+..|
T Consensus 331 ~C~~L~~i~ip~~ 343 (379)
T 4h09_A 331 NCKALSTISYPKS 343 (379)
T ss_dssp TCTTCCCCCCCTT
T ss_pred CCCCCCEEEECCc
Confidence 9999999888654
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.69 E-value=0.03 Score=55.87 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=26.9
Q ss_pred CCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 377 VTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 377 ~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
..++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999878899999987644
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.65 E-value=0.0018 Score=58.98 Aligned_cols=84 Identities=8% Similarity=0.141 Sum_probs=38.6
Q ss_pred CCCCCcEEEcccC-cCccC--CC---cc-cccccceeecccccccccCC---cchhcCCCCccEEEccCCcCccc----C
Q 008431 14 RLPGLRSLSFINN-SFDGP--MP---SV-GKLTLRALYLSLNKFTGEIP---SDAFAGMDQLKKVHLARNHFSGQ----I 79 (565)
Q Consensus 14 ~l~~L~~L~l~~N-~l~~~--~p---~~-~~~~L~~L~Ls~N~l~g~ip---~~~~~~l~~L~~L~l~~N~l~g~----~ 79 (565)
+-+.|+.|+|++| .|... .. .+ ....|+.|+|++|+|...-- .+++..-+.|++|+|++|.|+.. +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3455666666664 55311 00 01 12246666666666651100 01122235566666666666521 1
Q ss_pred CccccCCCCCCEEeccCC
Q 008431 80 PKSLAGLQKLLQLNLEGN 97 (565)
Q Consensus 80 p~~~~~l~~L~~L~l~~N 97 (565)
-..+..-+.|+.|+|++|
T Consensus 119 a~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCceeEEECCCC
Confidence 222333445666666543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.62 E-value=0.14 Score=52.13 Aligned_cols=144 Identities=17% Similarity=0.200 Sum_probs=78.8
Q ss_pred ceecccCceeEEEEEEeC--------CCeeEEEEeeccCc-----------cCH-------HHHHHHHHHHhcCCCCC-c
Q 008431 259 EVLGSGSFGSSYKAVLLT--------GPAMVVKRFRQMSN-----------VGK-------EDFHEHMTRLGSLSHPN-L 311 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~-----------~~~-------~~~~~E~~~l~~l~H~n-i 311 (565)
+.|..|-...+|++...+ +..|.++..-.... .++ +....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788899988653 25677776543211 111 12335888877775333 4
Q ss_pred cceEEEEEecCceEEEEeccCCCCHH--------------HH---HhhcCCCCCCCCC--HHHHHHHHHHHH--------
Q 008431 312 LPLIAFYYRKEEKLLVSDFVPNGSLA--------------NL---LHVRRAPGQPGLD--WPIRLKIIKGVA-------- 364 (565)
Q Consensus 312 v~l~~~~~~~~~~~lv~E~~~~gsL~--------------~~---l~~~~~~~~~~l~--~~~~~~i~~~ia-------- 364 (565)
.++++++. + .+|+||+++-+|. .. ++........... |....++..++.
T Consensus 138 Pkl~~~~~--~--G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP--Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET--T--EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC--C--CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 46666653 2 2899999864431 11 1111111111222 334333333221
Q ss_pred --------------HHHHHH----HhhCCCCCCccCCCCCCCEEEcCC------CCcEEeccCCcc
Q 008431 365 --------------KGLAYL----YKEFPGVTLPHGHLKSSNVLLDNA------YEPLLTDYALVP 406 (565)
Q Consensus 365 --------------~gL~yl----H~~~~~~~ivHrDlkp~NILl~~~------~~~kl~DfGla~ 406 (565)
..+..| .....+..++|+|+.+.|||++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 223333 222234468999999999999876 789999997653
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.07 E-value=0.15 Score=52.31 Aligned_cols=143 Identities=15% Similarity=0.229 Sum_probs=81.2
Q ss_pred ceecccCceeEEEEEEeC--------CCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCc-cceEEEEEecCceEEEEe
Q 008431 259 EVLGSGSFGSSYKAVLLT--------GPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNL-LPLIAFYYRKEEKLLVSD 329 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~E 329 (565)
+.+..|-...+|+....+ +..++++....... ..-...+|..+++.+.-.++ .++++.+ .-++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEEE
Confidence 467778888999998653 57788887543221 11123567777776642233 4555432 2378999
Q ss_pred ccCCCCHH--------------HH---HhhcCC-----C---CCCCCCHHHHHHHHHH-------------------HHH
Q 008431 330 FVPNGSLA--------------NL---LHVRRA-----P---GQPGLDWPIRLKIIKG-------------------VAK 365 (565)
Q Consensus 330 ~~~~gsL~--------------~~---l~~~~~-----~---~~~~l~~~~~~~i~~~-------------------ia~ 365 (565)
|++|..|. +. +|.... . .....-|..+.++..+ +..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 99986531 11 111100 0 1111124443333322 223
Q ss_pred HHHHHHhhC--------------------CCCCCccCCCCCCCEEEcCCCCcEEeccCCccc
Q 008431 366 GLAYLYKEF--------------------PGVTLPHGHLKSSNVLLDNAYEPLLTDYALVPI 407 (565)
Q Consensus 366 gL~ylH~~~--------------------~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~~ 407 (565)
.+.+|.+.. .+..++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 444544221 1235789999999999 7888999999987643
No 446
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=92.74 E-value=0.031 Score=50.84 Aligned_cols=89 Identities=12% Similarity=0.158 Sum_probs=57.3
Q ss_pred hcCCCCCCcEEEcccCcCcc--CCC--c-c-cccccceeecccccccccCC---cchhcCCCCccEEEccCCc---Ccc-
Q 008431 11 TLSRLPGLRSLSFINNSFDG--PMP--S-V-GKLTLRALYLSLNKFTGEIP---SDAFAGMDQLKKVHLARNH---FSG- 77 (565)
Q Consensus 11 ~~~~l~~L~~L~l~~N~l~~--~~p--~-~-~~~~L~~L~Ls~N~l~g~ip---~~~~~~l~~L~~L~l~~N~---l~g- 77 (565)
.+..-+.|+.|+|++|+|.. ... . + ...+|+.|+|++|+|+..-- .+++..-+.|++|+|++|. +..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 45566789999999999973 222 1 1 23369999999999973210 0123444679999998763 332
Q ss_pred ---cCCccccCCCCCCEEeccCCcC
Q 008431 78 ---QIPKSLAGLQKLLQLNLEGNSF 99 (565)
Q Consensus 78 ---~~p~~~~~l~~L~~L~l~~N~l 99 (565)
.+-..+..-++|..|+|+.|..
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHHhCCCcCeEeccCCCc
Confidence 1333455556777777776653
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.21 E-value=0.5 Score=43.22 Aligned_cols=120 Identities=12% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCCCccceEEEEEecCceEEEEeccCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCCCccCCC
Q 008431 306 LSHPNLLPLIAFYYRKEEKLLVSDFVPNG-SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLAYLYKEFPGVTLPHGHL 384 (565)
Q Consensus 306 l~H~niv~l~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~ylH~~~~~~~ivHrDl 384 (565)
-.||+++.. .+-.+.+.+.+.++.-+.+ ++.. ++ .++...+++++.+|+.-..+++. -+|--+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik--------~~~~~eKlr~l~ni~~l~~~~~~------r~tf~L 105 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK--------SFTKNEKLRYLLNIKNLEEVNRT------RYTFVL 105 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG--------GSCHHHHHHHHHHGGGGGGGGGS------SEECCC
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH--------hcCHHHHHHHHHHHHHHHHHhcC------ceEEEE
Confidence 368888876 4555666666666654422 2222 22 27778999999999887765553 347778
Q ss_pred CCCCEEEcCCCCcEEeccCCcccccccccccccccccCCCccCCCCCCcchhHH-HHHHHHHHHHcCCCCccccccC
Q 008431 385 KSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVW-SLGILILELLTGKFPANYLAQG 460 (565)
Q Consensus 385 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw-S~Gvil~el~tg~~p~~~~~~~ 460 (565)
.|+||+++.++.+++.-.|+... ++|. .. ..-|-| .+=|++..+++++..|+..-.+
T Consensus 106 ~P~NL~f~~~~~p~i~~RGik~~-------------l~P~-----~~-~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 106 APDELFFTRDGLPIAKTRGLQNV-------------VDPL-----PV-SEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp SGGGEEECTTSCEEESCCEETTT-------------BSCC-----CC-CHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred ecceEEEcCCCCEEEEEccCccC-------------CCCC-----CC-CHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 99999999999999988876432 2232 11 233444 6888999999999999754443
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.45 E-value=0.12 Score=53.73 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=17.3
Q ss_pred ceecccCceeEEEEEEeC-CCeeEE------EEeeccC--ccCHHHHHHHHHHHhcCCCCCccceEEEEEe
Q 008431 259 EVLGSGSFGSSYKAVLLT-GPAMVV------KRFRQMS--NVGKEDFHEHMTRLGSLSHPNLLPLIAFYYR 320 (565)
Q Consensus 259 ~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 320 (565)
+.|| ||.||+|.+.. ...||| |..+... ......|.+|..+++.++|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4565 99999999653 467888 7665422 2234568899999999999999999887653
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.11 E-value=3 Score=38.15 Aligned_cols=115 Identities=11% Similarity=0.114 Sum_probs=77.9
Q ss_pred CCCCccceEEEEEecCceEEEEeccCCC-CHHHHHhhcCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhhCCCCCCccCCC
Q 008431 307 SHPNLLPLIAFYYRKEEKLLVSDFVPNG-SLANLLHVRRAPGQPGLDWPIRLKIIKGVAKGLA-YLYKEFPGVTLPHGHL 384 (565)
Q Consensus 307 ~H~niv~l~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~gL~-ylH~~~~~~~ivHrDl 384 (565)
.||++ -..+-.+++.+.+.++.-+++ ++. .++ .++...+++++.+|+.-.. +++. -+|--+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~--------~~~~~eKlrll~nl~~L~~~~~~~------r~tf~l 110 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR--------KTTLLSRIRAAIHLVSKVKHHSAR------RLIFIV 110 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH--------TSCHHHHHHHHHHHHHHHSSCCSS------SEECCC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH--------hcCHHHHHHHHHHHHHHHHHhhhC------ceeEEE
Confidence 57777 233345666777777765443 343 333 2777889999888877665 4443 457778
Q ss_pred CCCCEEEcCCCCcEEeccCCcccccccccccccccccCCCccCCCCCCcchhHH-HHHHHHHHHHcCCCCcccc
Q 008431 385 KSSNVLLDNAYEPLLTDYALVPIVNKEHAQLHMVAYKSPEFNQTDGVTRKTDVW-SLGILILELLTGKFPANYL 457 (565)
Q Consensus 385 kp~NILl~~~~~~kl~DfGla~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw-S~Gvil~el~tg~~p~~~~ 457 (565)
.|+||++|.++.+++.-.|+-.. ++|.- ....|-| .+=|++..++.++..|+..
T Consensus 111 ~P~NL~f~~~~~p~i~hRGi~~~-------------lpP~e------~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 111 CPENLMFNRALEPFFLHVGVKES-------------LPPDE------WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp CGGGEEECTTCCEEESCCEETTT-------------BSSCS------CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred eCceEEEeCCCcEEEEEcCCccc-------------CCCCC------CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 89999999999999998886432 34431 1233444 6888999999999888643
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=74.85 E-value=3.2 Score=32.83 Aligned_cols=48 Identities=19% Similarity=0.291 Sum_probs=35.6
Q ss_pred ccccccCCcchhcCCCCccEEEccCCcCcccCCccccCCCCCCEEeccCC
Q 008431 48 NKFTGEIPSDAFAGMDQLKKVHLARNHFSGQIPKSLAGLQKLLQLNLEGN 97 (565)
Q Consensus 48 N~l~g~ip~~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~L~l~~N 97 (565)
..++ .|...+|.++++|+.+.|..+ ++.+-..+|.++.+|+.+.+.+.
T Consensus 6 ~~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3455 677888888899998888766 55455667888888888877654
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=57.40 E-value=7.4 Score=39.20 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=24.4
Q ss_pred CCccCCCCCCCEEE------cCCCCcEEeccCCccc
Q 008431 378 TLPHGHLKSSNVLL------DNAYEPLLTDYALVPI 407 (565)
Q Consensus 378 ~ivHrDlkp~NILl------~~~~~~kl~DfGla~~ 407 (565)
.++|+|+.+.|||+ +++..+.++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4566789999987643
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=51.17 E-value=4.2 Score=26.70 Aligned_cols=9 Identities=11% Similarity=-0.193 Sum_probs=3.9
Q ss_pred eeeecCCCC
Q 008431 179 FSCTRGNNS 187 (565)
Q Consensus 179 ~~~~~~~~~ 187 (565)
+++.||++.
T Consensus 32 ~~~~RRr~~ 40 (44)
T 2ks1_B 32 GLFMRRRHI 40 (44)
T ss_dssp HHHHHTTTC
T ss_pred HHHhhhhHh
Confidence 344444443
No 453
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=47.24 E-value=2.5e+02 Score=29.78 Aligned_cols=46 Identities=17% Similarity=0.286 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHH--HHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCc
Q 008431 352 DWPIRLKIIKGVAK--GLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALV 405 (565)
Q Consensus 352 ~~~~~~~i~~~ia~--gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla 405 (565)
.|..+..+++.+|. -+.|+- +| +|=.++|||++.+|++--+|||.+
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YIL------Gi--gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYIL------GV--GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH------TC--CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cHHHHHHHHHHHHHHhHhheee------ec--cCCCCcceeEcCCCCEeeeehHHh
Confidence 35566666665543 345553 33 577899999999999999999986
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=45.73 E-value=4.4 Score=26.56 Aligned_cols=10 Identities=10% Similarity=-0.081 Sum_probs=4.2
Q ss_pred heeeecCCCC
Q 008431 178 AFSCTRGNNS 187 (565)
Q Consensus 178 ~~~~~~~~~~ 187 (565)
.+++.||++.
T Consensus 30 ~~~~~RRRr~ 39 (44)
T 2l2t_A 30 FAVYVRRKSI 39 (44)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHhhhhhh
Confidence 3344444443
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.19 E-value=50 Score=25.72 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=15.7
Q ss_pred cCCcchhcCCCCccEEEccCC
Q 008431 53 EIPSDAFAGMDQLKKVHLARN 73 (565)
Q Consensus 53 ~ip~~~~~~l~~L~~L~l~~N 73 (565)
.|...+|.++.+|+.+.+...
T Consensus 33 ~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 33 LLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCTTSSTTCTTCCCEEECCS
T ss_pred eEcHHHHhccCCccEEEEcCC
Confidence 566677888888888887654
No 456
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=35.73 E-value=1e+02 Score=33.30 Aligned_cols=45 Identities=22% Similarity=0.292 Sum_probs=31.9
Q ss_pred HHHHHHHHHHH--HHHHHHHhhCCCCCCccCCCCCCCEEEcCCCCcEEeccCCcc
Q 008431 354 PIRLKIIKGVA--KGLAYLYKEFPGVTLPHGHLKSSNVLLDNAYEPLLTDYALVP 406 (565)
Q Consensus 354 ~~~~~i~~~ia--~gL~ylH~~~~~~~ivHrDlkp~NILl~~~~~~kl~DfGla~ 406 (565)
..+..+++.+| .-+.|+- +| +|=.++||||+.+|++--+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL------Gl--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL------GV--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc------cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34555655554 2234443 33 7888999999999999999999863
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.61 E-value=2.8e+02 Score=26.86 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=66.6
Q ss_pred ccCceeEEEEEEeCCCeeEEEEeeccCccCHHHHHHHHHHHhcCCCCCccceEEEE--------------E---------
Q 008431 263 SGSFGSSYKAVLLTGPAMVVKRFRQMSNVGKEDFHEHMTRLGSLSHPNLLPLIAFY--------------Y--------- 319 (565)
Q Consensus 263 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~--------------~--------- 319 (565)
++|.+-||.+.. ++..++||-.. ....+-|..++...-.+.-|+.- ++.+. .
T Consensus 78 ~~Gstgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l~~l 152 (342)
T 1cja_A 78 EKGTEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVITTL 152 (342)
T ss_dssp CSTTSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHHHHH
T ss_pred cCCCCCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHHHHh
Confidence 344556666665 57788888441 22233344444444444544421 11111 0
Q ss_pred ecCceEEEEeccCCCCHHHHHhhcCCCCCCCCCHHHH--HHHHHHH--HHHHHHHHhhCCCCCCcc-CCCCCCCEEEcCC
Q 008431 320 RKEEKLLVSDFVPNGSLANLLHVRRAPGQPGLDWPIR--LKIIKGV--AKGLAYLYKEFPGVTLPH-GHLKSSNVLLDNA 394 (565)
Q Consensus 320 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~l~~~~~--~~i~~~i--a~gL~ylH~~~~~~~ivH-rDlkp~NILl~~~ 394 (565)
.....+++|||.+|..|.+.-. ..|... .+...++ .-++.++..+.-..+.+. .--.+.|||++.+
T Consensus 153 ~~~~~~l~meyv~G~~L~e~~~---------~~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 153 ANQANILLMELVRGITLNKLTT---------TSAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp TTCSEEEEEECCCEEESTTCCS---------SSHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred hcccceehhhhcCCCccccchh---------hhhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 0124569999998755432110 111111 1222222 345566665532222222 2357899999775
Q ss_pred CC-cEEeccCCcccc
Q 008431 395 YE-PLLTDYALVPIV 408 (565)
Q Consensus 395 ~~-~kl~DfGla~~~ 408 (565)
.. +.++|-+++...
T Consensus 224 n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 224 GATVVPIDSKIIPLD 238 (342)
T ss_dssp TTCEEECSCCCCCCC
T ss_pred CCeEEEEcCCccccC
Confidence 44 788999887553
Done!