BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008437
(565 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/567 (66%), Positives = 439/567 (77%), Gaps = 13/567 (2%)
Query: 1 MRKYSKLFRSEMIDDNDSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRP-N 59
MRKYSKLFRSEM+D+NDS STPCSPT Q ED V+ AF RQLSK S N++P N
Sbjct: 211 MRKYSKLFRSEMMDENDSPCSTPCSPTGQGPNEDRVN-----AFGRQLSKFGSINYKPMN 265
Query: 60 NRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPH 119
+R+SGQMP+PPEELRCPISLQLMYDPVIIASGQTYER+CIEKW SDGH++CPKTQQ+LPH
Sbjct: 266 SRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPH 325
Query: 120 LCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSE-ESTNSKSNEIVRSCKL 178
L LTPNYCVKGLIASWCE NG++VP PP+SLDLNYWRLA+S+ ES NSKS + V C
Sbjct: 326 LSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTP 385
Query: 179 KEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIV 238
K+++VVPLE S TIE +N E +S NV E YQD L ++++ E+L +KC +V
Sbjct: 386 KDIRVVPLEESSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVV 445
Query: 239 EQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNK 298
E +R+LLKD+EEAR+ GANGFV A L+FLESAV + N+ AQE GAMALFNLAVNNNRNK
Sbjct: 446 ENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNK 505
Query: 299 ELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTE 358
ELML +GVIPLLEKMIS S S G ATALYLNLS L+ AKP+IGSS AV F V L T+
Sbjct: 506 ELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTK 565
Query: 359 HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAA 418
QCKLDALHALYNLST NIP LLS+ II LQ LA G+ +W EKSLAVLLNLA+S
Sbjct: 566 TQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSRE 625
Query: 419 GKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSI 478
GKEEM +T G++S LATVLDTG+ +EQEQAVSCL +LC G+E C QMVLQEGVIP+LVSI
Sbjct: 626 GKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSI 685
Query: 479 SVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTPTPDHAPES--K 536
SVNGS RGRDK+Q+LLMLFREQR RD P + +++ P P P APES K
Sbjct: 686 SVNGSPRGRDKSQKLLMLFREQRHRDQPSPN--KEEAPRKTVSAPMAIPAPVSAPESEVK 743
Query: 537 PLCKSISRRK-MGKAFSFLWKSKSYSV 562
PL KSISRRK M + FSFLWK KS+S+
Sbjct: 744 PLTKSISRRKTMTRPFSFLWK-KSHSI 769
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/573 (64%), Positives = 444/573 (77%), Gaps = 25/573 (4%)
Query: 1 MRKYSKLFRSEMIDDNDSQGST--PCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRP 58
MRKYSKLFRSE+ DDNDSQGS+ PCSPTIQ S +D + AFDRQLSKL SFNFR
Sbjct: 211 MRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDDA----HGRAFDRQLSKLSSFNFRS 266
Query: 59 --NNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQK 116
NNRRS QM +PPEELRCPISLQLMYDPVIIASGQTYERICIEKW SDGH+TCPKT Q+
Sbjct: 267 CNNNRRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQ 326
Query: 117 LPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALS-EESTNSKSNEIVRS 175
L HLCLTPNYCVK LI+SWCE NGV VPD PP+SLDLNYWRLALS EST+++S + V S
Sbjct: 327 LSHLCLTPNYCVKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGS 386
Query: 176 CKLKEMKVVPLEVSGTIEE----SEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENL 231
CKLK++KVVPLE SGTI+E SEY QED+ + ER + L L + + L
Sbjct: 387 CKLKDVKVVPLEESGTIKEEACESEY--------QEDQV--TLVERCTELLTTLTDVDTL 436
Query: 232 GQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLA 291
+KC +VEQIR+LLKDDEEAR+ G NG V ALL+FL SA+ E N+ AQ++GAMALFNLA
Sbjct: 437 RKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLA 496
Query: 292 VNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVE 351
V+NNRNKELMLA+G+IPLLE+M+ N +SHG+ TA+YLNLS L++AKP+IGSS AVPF+V
Sbjct: 497 VDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVN 556
Query: 352 LCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLL 411
L +TE QCK+DALH+L++LST P NIP LLSA +++ LQSL + + WTEKSLAVLL
Sbjct: 557 LLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLL 616
Query: 412 NLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGV 471
NL + AGK+EM S P LVS L T+LDTGE EQEQAVS L +LCN +E C +MVLQEGV
Sbjct: 617 NLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGV 676
Query: 472 IPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTPTPDH 531
IP+LVSISVNG+ RGR++AQ+LL LFRE RQRD + Q + +S + ++
Sbjct: 677 IPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSP--EDGFSVASAA 734
Query: 532 APESKPLCKSISRRKMGKAFSFLWKSKSYSVSQ 564
E+KP CKS SR+KMG+AFSFLWKSKS+SV Q
Sbjct: 735 VTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQ 767
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/586 (62%), Positives = 436/586 (74%), Gaps = 36/586 (6%)
Query: 1 MRKYSKLFRSEMIDDNDSQGSTPCSPTIQCSFEDGVHNGNEHAFDRQLSKLCSFNFRP-N 59
MRK SKLFRSE++D+NDS GS PCSP ED +G+ H F RQLS+ S N +P N
Sbjct: 211 MRKCSKLFRSEILDENDSPGSYPCSPN-----ED---HGSVHGFGRQLSRFGSLNDKPMN 262
Query: 60 NRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPH 119
+ SGQMP+PPEELRCPISLQLM DPVIIASGQTYER+CIEKW SDGH+TCPKTQQ+LPH
Sbjct: 263 SINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPH 322
Query: 120 LCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSE-ESTNSKSNEIVRSCKL 178
+ LTPN CVKGLIASWCE NG +P PP+S DL+YWRLALS+ EST S+S + S KL
Sbjct: 323 ISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKL 382
Query: 179 KEMKVVPLEVSGTIEESEYNDIENIYAQEDESGN---NVFERYQDFLNVLNEGENLGQKC 235
K +K+VPLE +GT N E+ + +D+ + NV ERYQD L VLNE E L +KC
Sbjct: 383 KGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKC 442
Query: 236 NIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNN 295
+VE+IRLLLKDDEEAR+F GANGFV ALLRFL SAV + N+ AQ+ GAMALFNLAVNNN
Sbjct: 443 KVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNN 502
Query: 296 RNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKG 355
RNKELML +GVI LLEKMIS++ SHG+ATALYLNLS LD+AK +IGSS AVPFLV+L +
Sbjct: 503 RNKELMLTSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQK 562
Query: 356 KTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQS-LAVPGDPMWTEKSLAVLLNLA 414
+ E QCKLDALHALYNLST NIP LLS+ II LQ LA G+ +W EKSLAVLLNLA
Sbjct: 563 EIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNLA 622
Query: 415 ASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPA 474
+S GK+E S+ G++S LATVLD G+ EQEQAVSCL +LCNG E C QMVLQEGVIP+
Sbjct: 623 SSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPS 682
Query: 475 LVSISVNGSTRGRDKAQRLLMLFREQRQ--------RDHPPVDIGQQDDDSSEKLKP--- 523
LVSISVNG+ RGR+K+Q+LLMLFRE+RQ RD PP Q + + + L
Sbjct: 683 LVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPP-----QKEPARKSLSAPLS 737
Query: 524 TYTPTPDHAP----ESKPLCKSISRRK-MGKAFSFLWKSKSYSVSQ 564
+ TP A E + L KS+SRRK M + FSF WK KSYSV +
Sbjct: 738 VHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 225/466 (48%), Gaps = 63/466 (13%)
Query: 32 FEDGVHNGNEHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASG 91
+D V +++ ++++ N + + S ++P+ P++ RCPISL++M DPVI++SG
Sbjct: 219 IKDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSG 278
Query: 92 QTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSL 151
QTYER CIEKW+ GHSTCPKTQQ L LTPNY ++ LIA WCE N + P PP SL
Sbjct: 279 QTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIE-PPKPPSSL 337
Query: 152 DLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESG 211
P +VS +E N IE
Sbjct: 338 R--------------------------------PRKVSSFSSPAEANKIE---------- 355
Query: 212 NNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESA 271
D + L G Q+ E IRLL K + + RV G + L+ L +
Sbjct: 356 --------DLMWRLAYGNPEDQRSAAGE-IRLLAKRNADNRVAIAEAGAIPLLVGLLSTP 406
Query: 272 VCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATALYLN 329
+S QE AL NL++ N NK +++AG IP + +++ + A A +
Sbjct: 407 ----DSRIQEHSVTALLNLSICEN-NKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFS 461
Query: 330 LSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIIS 389
LS +D+ K IG+ A+P LV L T+ + K DA AL+NL N + AG+I
Sbjct: 462 LSVIDENKVTIGALGAIPPLVVLLNEGTQ-RGKKDAATALFNLCIYQGNKGKAIRAGVIP 520
Query: 390 GLQSLAV-PGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQA 448
L L PG M E +LA+L L++ GK + S+ V L + TG +E A
Sbjct: 521 TLTRLLTEPGSGMVDE-ALAILAILSSHPEGKAIIGSSDA-VPSLVEFIRTGSPRNRENA 578
Query: 449 VSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLL 494
+ L LC+G+ + + G++ L+ ++ NG+ RG+ KA +LL
Sbjct: 579 AAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLL 624
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 240/476 (50%), Gaps = 52/476 (10%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P + RC +SL+LM DPVI+ASGQT+ER+ I+KW+ G CPKT+Q L H LTPN+ V+
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNY----WRLALSEESTNSKSNEIVRSCKLKEMKVV- 184
+ASWCE N V PPD L+L + + L + +S N S +E++ V
Sbjct: 301 AFLASWCETNNV----YPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVF 356
Query: 185 ------PLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEG------ENLG 232
P VS + +++ N+ N A + +N ++ + + + G G
Sbjct: 357 SRSASAPGIVSEVVCKTKRNN--NAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETG 414
Query: 233 QKCNIVEQIRLLLKD----------DEEARVFTGA-----NGFVVALLRFLESAVCERNS 277
+I +++ L+ D + AR+ A N V+A + S V S
Sbjct: 415 SSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYS 474
Query: 278 YAQEIGAMA---LFNLAVNNNRNKELMLAAG-VIPLLEKM----ISNSNSHGAATALYLN 329
+ I A A L NL++N+N NK L+ +G ++PL+ + + + ++ AAT +
Sbjct: 475 TDERIQADAVTCLLNLSINDN-NKSLIAESGAIVPLIHVLKTGYLEEAKANSAAT--LFS 531
Query: 330 LSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIIS 389
LS +++ K IG + A+ LV+L G K DA AL+NLS N ++ AG +
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLL-GSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVR 590
Query: 390 GLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAV 449
L L P M EK++ VL NLA GK + G + L V++ G +E A
Sbjct: 591 YLVELMDPAFGM-VEKAVVVLANLATVREGKIAIGEEGG-IPVLVEVVELGSARGKENAT 648
Query: 450 SCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDH 505
+ L LC + K C V++EGVIP LV+++ +G+ RG++KAQ LL F+ RQ +
Sbjct: 649 AALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSNQ 704
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 217/463 (46%), Gaps = 74/463 (15%)
Query: 41 EHAFDRQLSKLCSFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIE 100
+HA D ++ S R P+ P+E RCPISL+LM DPVI++SGQTYER CI+
Sbjct: 208 DHANDALTTRSASIKHRS--------PIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQ 259
Query: 101 KWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLAL 160
KWL GH TCPKTQQ L H LTPN+ +K LI+ WCE NG+ +P
Sbjct: 260 KWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGIELP---------------- 303
Query: 161 SEESTNSKSNEIVRSCKLKEMKVVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQD 220
+ NS+ + +S S+Y D +G
Sbjct: 304 -KNKQNSRDKKAAKS-------------------SDY----------DHAG------LVS 327
Query: 221 FLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQ 280
+N L G Q+ E IRLL K + R+ G + L+ L S+ + Q
Sbjct: 328 LMNRLRSGNQDEQRAAAGE-IRLLAKRNVNNRICIAEAGAIPLLVNLLSSS----DPRTQ 382
Query: 281 EIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLSFLDDAKP 338
E AL NL+++ N NK ++ + IP + +++ + + A A +LS +D+ K
Sbjct: 383 EHAVTALLNLSIHEN-NKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKV 441
Query: 339 IIGSSHAVPFLVE-LCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 397
IG++ A+P L+ LC G + K DA A++NL N + AGI+ L + V
Sbjct: 442 TIGAAGAIPPLINLLCDGSP--RGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVD 499
Query: 398 GDPMWTEKSLAVLLNLAASAAGKEEM-NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC 456
+++L++L LA + GK + S P + L V+ TG +E A + L+LLC
Sbjct: 500 PTGGMIDEALSLLSILAGNPEGKIVIARSEP--IPPLVEVIKTGSPRNRENAAAILWLLC 557
Query: 457 NGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFRE 499
+ + + GV AL +S G+ R + KA +L L +
Sbjct: 558 SADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQ 600
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 207/455 (45%), Gaps = 64/455 (14%)
Query: 66 MPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPN 125
M +PPEE RCPISL+LM DPVI++SGQTYER CI+KWL GH TCPKTQ+ L +TPN
Sbjct: 253 MLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPN 312
Query: 126 YCVKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVP 185
Y ++ LIA WCE NG+ P P ++ + + S + + + N+I LK P
Sbjct: 313 YVLRSLIAQWCESNGIEPPKRP--NISQPSSKASSSSSAPDDEHNKI-EELLLKLTSQQP 369
Query: 186 LEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLL 245
+ E +N + + + + + L + N+ Q+ + + L +
Sbjct: 370 EDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRT--QEHAVTSILNLSI 427
Query: 246 KDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAG 305
+ + ++ ++G V ++ L+ E A+E A LF+L+V + NK + AAG
Sbjct: 428 CQENKGKIVY-SSGAVPGIVHVLQKGSME----ARENAAATLFSLSV-IDENKVTIGAAG 481
Query: 306 VIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCK 362
IP L ++S + G AATAL+ NL K + VP L+ L TE +
Sbjct: 482 AIPPLVTLLSEGSQRGKKDAATALF-NLCIFQGNKGKAVRAGLVPVLMRLL---TEPESG 537
Query: 363 L--DALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGK 420
+ ++L L LS+ P + +A + L G P E S AVL++
Sbjct: 538 MVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVH-------- 589
Query: 421 EEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISV 480
LC+ N++ + G++ L+ ++
Sbjct: 590 ----------------------------------LCSWNQQHLIEAQKLGIMDLLIEMAE 615
Query: 481 NGSTRGRDKAQRLLMLFRE--QRQRDHPPVDIGQQ 513
NG+ RG+ KA +LL F +Q+ H + + Q
Sbjct: 616 NGTDRGKRKAAQLLNRFSRFNDQQKQHSGLGLEDQ 650
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 182/379 (48%), Gaps = 49/379 (12%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P+E RCPISL+LM DPVI+++GQTYER CIEKW++ GH TCP TQQK+ LTPNY ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 130 GLIASWCEMNGV------SVPDSPP-----------DSL-------DLNYWRLALSEEST 165
LI+ WCE NG+ + P+ P D+L D R A +E
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRL 393
Query: 166 NSKSNEIVRSCKLKEMKVVPLEVSGT------IEESEYNDIENIYAQEDESGNNVFE-RY 218
+K N R C + E +PL +S +E + N+ ED + +
Sbjct: 394 LAKRNANNRIC-IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAV 452
Query: 219 QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 278
++VL G ++ L + D E +V G G + AL+ L E +
Sbjct: 453 PSIVHVLKNGSMEARENAAATLFSLSVID--EYKVTIGGMGAIPALVVLL----GEGSQR 506
Query: 279 AQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA----ATALYLNLSFLD 334
++ A ALFNL + NK + AG++PL+ +++N GA A A+ LS
Sbjct: 507 GKKDAAAALFNLCIYQG-NKGRAIRAGLVPLIMGLVTNPT--GALMDEAMAILSILSSHP 563
Query: 335 DAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA---GIISGL 391
+ K IG++ VP LVE+ T + +A + +L + ++ +L A GI+ L
Sbjct: 564 EGKAAIGAAEPVPVLVEMIGSGTPRN-RENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Query: 392 QSLAVPGDPMWTEKSLAVL 410
+ LA+ G K++ +L
Sbjct: 623 RELALNGTDRGKRKAVQLL 641
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 280 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAK 337
QE AL NL+++ + NK ++++G +P + ++ N + A A +LS +D+ K
Sbjct: 426 QEHAVTALLNLSIHED-NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYK 484
Query: 338 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 397
IG A+P LV L G+ + K DA AL+NL N + AG++ + L
Sbjct: 485 VTIGGMGAIPALVVLL-GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
Query: 398 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCN 457
++++A+L L++ GK + + V L ++ +G +E A + + LC+
Sbjct: 544 PTGALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCS 602
Query: 458 GNEKCCQMVLQE--GVIPALVSISVNGSTRGRDKAQRLL 494
G + + G++ L +++NG+ RG+ KA +LL
Sbjct: 603 GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 182/379 (48%), Gaps = 49/379 (12%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P+E RCPISL+LM DPVI+++GQTYER CIEKW++ GH TCP TQQK+ LTPNY ++
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 130 GLIASWCEMNGV------SVPDSPP-----------DSL-------DLNYWRLALSEEST 165
LI+ WCE NG+ + P+ P D+L D R A +E
Sbjct: 334 SLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAELRL 393
Query: 166 NSKSNEIVRSCKLKEMKVVPLEVSGT------IEESEYNDIENIYAQEDESGNNVFE-RY 218
+K N R C + E +PL +S +E + N+ ED + +
Sbjct: 394 LAKRNANNRIC-IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAV 452
Query: 219 QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSY 278
++VL G ++ L + D E +V G G + AL+ L E +
Sbjct: 453 PSIVHVLKNGSMEARENAAATLFSLSVID--EYKVTIGGMGAIPALVVLL----GEGSQR 506
Query: 279 AQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA----ATALYLNLSFLD 334
++ A ALFNL + NK + AG++PL+ +++N GA A A+ LS
Sbjct: 507 GKKDAAAALFNLCIYQG-NKGRAIRAGLVPLIMGLVTNPT--GALMDEAMAILSILSSHP 563
Query: 335 DAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA---GIISGL 391
+ K IG++ VP LVE+ T + +A + +L + ++ +L A GI+ L
Sbjct: 564 EGKAAIGAAEPVPVLVEMIGSGTPRN-RENAAAVMLHLCSGEHHLVHLARAQECGIMVPL 622
Query: 392 QSLAVPGDPMWTEKSLAVL 410
+ LA+ G K++ +L
Sbjct: 623 RELALNGTDRGKRKAVQLL 641
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 280 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAK 337
QE AL NL+++ + NK ++++G +P + ++ N + A A +LS +D+ K
Sbjct: 426 QEHAVTALLNLSIHED-NKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYK 484
Query: 338 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 397
IG A+P LV L G+ + K DA AL+NL N + AG++ + L
Sbjct: 485 VTIGGMGAIPALVVLL-GEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTN 543
Query: 398 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCN 457
++++A+L L++ GK + + V L ++ +G +E A + + LC+
Sbjct: 544 PTGALMDEAMAILSILSSHPEGKAAIGAAEP-VPVLVEMIGSGTPRNRENAAAVMLHLCS 602
Query: 458 GNEKCCQMVLQE--GVIPALVSISVNGSTRGRDKAQRLL 494
G + + G++ L +++NG+ RG+ KA +LL
Sbjct: 603 GEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLL 641
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 202/441 (45%), Gaps = 67/441 (15%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
PE+ CPISL+LM DP I+++GQTYER I++W+ G+ +CPKTQQKL + LTPNY ++
Sbjct: 244 PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLR 303
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 189
LI+ WC + + P ++ + NS + S + ++ + ++S
Sbjct: 304 SLISQWCTKHNIEQPGG------------YMNGRTKNSDGSFRDLSGDMSAIRALVCKLS 351
Query: 190 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 249
E + I + S +N R+L+ +
Sbjct: 352 SQSIEDRRTAVSEIRSLSKRSTDN----------------------------RILIAE-- 381
Query: 250 EARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGV--- 306
GA +V LL + ++ QE + NL++ + NKEL++ AG
Sbjct: 382 -----AGAIPVLVKLL------TSDGDTETQENAVTCILNLSIYEH-NKELIMLAGAVTS 429
Query: 307 IPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDAL 366
I L+ + S AA L+ +LS D+ K IIG+S A+ LV+L + + + K DA
Sbjct: 430 IVLVLRAGSMEARENAAATLF-SLSLADENKIIIGASGAIMALVDLLQYGS-VRGKKDAA 487
Query: 367 HALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKSLAVLLNLAASAAGKEEM-- 423
AL+NL N + AGI+ L + L +++L +L LA++ K +
Sbjct: 488 TALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILR 547
Query: 424 -NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNG 482
N+ P L+ L + +E A + L LC + + + + G + L+ +S +G
Sbjct: 548 ANAIPPLID----CLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDG 603
Query: 483 STRGRDKAQRLLMLFREQRQR 503
+ R + KA LL L R+ ++
Sbjct: 604 TERAKRKANSLLELLRKSSRK 624
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 140/266 (52%), Gaps = 12/266 (4%)
Query: 240 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 299
++RLL K + + R+ G +G +V L+ L S +S QE AL NL++N+N K
Sbjct: 564 ELRLLAKHNMDNRIVIGNSGAIVLLVELLYST----DSATQENAVTALLNLSINDNNKKA 619
Query: 300 LMLAAGVIPL---LEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGK 356
+ A + PL LE S + + AAT +LS +++ K IG S A+ LV+L G
Sbjct: 620 IADAGAIEPLIHVLENGSSEAKENSAAT--LFSLSVIEENKIKIGQSGAIGPLVDLL-GN 676
Query: 357 TEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAAS 416
+ K DA AL+NLS N ++ +G + L L P M +K++AVL NLA
Sbjct: 677 GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGM-VDKAVAVLANLATI 735
Query: 417 AAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALV 476
G+ + G + L V++ G +E A + L L + + C MVLQEG +P LV
Sbjct: 736 PEGRNAIGQEGG-IPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLV 794
Query: 477 SISVNGSTRGRDKAQRLLMLFREQRQ 502
++S +G+ R R+KAQ LL FR QR
Sbjct: 795 ALSQSGTPRAREKAQALLSYFRNQRH 820
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 75 CPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKGLIAS 134
CP+SL++M DPVI++SGQTYE+ I++W+ G CPKT+Q L H L PNY VK LIA+
Sbjct: 236 CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALIAN 295
Query: 135 WCEMNGVSVPDSPPDSLDLN 154
WCE N V +PD P S LN
Sbjct: 296 WCETNDVKLPD-PNKSTSLN 314
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 196/435 (45%), Gaps = 68/435 (15%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P E CPI+L++M DPVIIA+GQTYE+ I+KW GH TCPKT+Q+L HL L PN+ +K
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 130 GLIASWCEMNGVSVPDS--PPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLE 187
LI WCE N +P+ PDS + ++L E+ +S E R +K+M+++ E
Sbjct: 351 NLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRS-VKQMRLLARE 409
Query: 188 VSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKD 247
+ EN + + + + + G + N V + L L
Sbjct: 410 -----------NPENRVLIANAGAIPLLVQLLSY-------PDSGIQENAVTTL-LNLSI 450
Query: 248 DEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVI 307
DE + G + ++ LE+ N A+E A ALF+L++ + + L+ G+
Sbjct: 451 DEVNKKLISNEGAIPNIIEILENG----NREARENSAAALFSLSMLDENKVTIGLSNGIP 506
Query: 308 PLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALH 367
PL++ + HG +GK DAL
Sbjct: 507 PLVDLL-----QHGT------------------------------LRGKK------DALT 525
Query: 368 ALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTP 427
AL+NLS +N + AGI+ L +L + +++L++LL LA+ G++ +
Sbjct: 526 ALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQL- 584
Query: 428 GLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGR 487
+ L + G +E A S L L + N LQ GV LV I+ +G+ R +
Sbjct: 585 SFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQ 644
Query: 488 DKAQRLLMLFREQRQ 502
KA L+ L + Q
Sbjct: 645 RKANALIQLISKSEQ 659
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 187/443 (42%), Gaps = 66/443 (14%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
PEE RCP+S +LM DPV++ASGQTY+++ I+KWLS G+ TCPKTQQ LPH LTPN ++
Sbjct: 75 PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIR 134
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 189
+I+ WC+ NG LE
Sbjct: 135 EMISKWCKKNG---------------------------------------------LETK 149
Query: 190 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 249
+ N+ E + + E N++ + NL + + +++RLL +
Sbjct: 150 SQYHPNLVNEDETVTRSDREIFNSLLCKVS--------SSNLQDQKSAAKELRLLTRKGT 201
Query: 250 EARVFTGANGFVVALLRFLESAVCERN--SYAQEIGAMALFNLAVNNNRNKELMLA-AGV 306
E R G + + R + + N QE L N++++++ NK+L+ V
Sbjct: 202 EFRALFGESPDEIT--RLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNV 259
Query: 307 IPLLEKMISNSN--SHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLD 364
IPLL + + A A LS LD K +IG S + L++L + K D
Sbjct: 260 IPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIK-D 318
Query: 365 ALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMN 424
A++ L N + G + L G ++ ++ LA+L L EE+
Sbjct: 319 VAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG--LYVDELLAILAMLVTHWKAVEELG 376
Query: 425 STPGLVSGLATVLDTGELIE-QEQAVSCLFLLC-NGNEKCCQMVLQEGVIPALVSISVNG 482
G VS L + E +E A+ L +C + K ++ +E + +S G
Sbjct: 377 ELGG-VSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSREG 435
Query: 483 STRGRDKAQRLLMLFREQRQRDH 505
++R + KA +L R+ H
Sbjct: 436 TSRAQRKANGILDRLRKAMNLTH 458
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 168/367 (45%), Gaps = 56/367 (15%)
Query: 60 NRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPH 119
+++S ++ +P + L CP+SL+LM DPVI+A+GQTYER I++W+ G+ TCPKTQQKL +
Sbjct: 233 SKKSDKLTIPVDFL-CPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLEN 291
Query: 120 LCLTPNYCVKGLIASWCEMNGVSVP-----DSPPDSLDLNYWRL---ALSEESTNSKSNE 171
LTPNY ++ LI+ WC + + P +S D++ R LS ST + N
Sbjct: 292 FTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNA 351
Query: 172 I--VRSCK---------LKEMKVVPLEVS------GTIEESEYNDIENIYAQEDESGNNV 214
+ +RS + E +P+ V+ +E+ + N+ E+ +
Sbjct: 352 VSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIM 411
Query: 215 FE-RYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVC 273
F + VL G ++ L L D E ++ G +G + AL+ LE+
Sbjct: 412 FAGAVTSIVQVLRAGTMEARENAAATLFSLSLAD--ENKIIIGGSGAIPALVDLLENGT- 468
Query: 274 ERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFL 333
++ A ALFNL + + NK + AG++ L KM+S+S H LS L
Sbjct: 469 ---PRGKKDAATALFNLCIYHG-NKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVL 524
Query: 334 ---DDAKPIIGSSHAVP-------------------FLVELCKGKTEHQCKLDALHALYN 371
DAK I ++ +P L+ LCK TE + L A+
Sbjct: 525 ANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVP 584
Query: 372 LSTIPSN 378
L + N
Sbjct: 585 LMDLSKN 591
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 16/270 (5%)
Query: 236 NIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNN 295
N V +IR L K + R+ G + L+ L S + QE + NL++ N
Sbjct: 350 NAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTS----EDVATQENAITCVLNLSIYEN 405
Query: 296 RNKELMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELC 353
NKEL++ AG + + +++ A A +LS D+ K IIG S A+P LV+L
Sbjct: 406 -NKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLL 464
Query: 354 KGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKSLAVLLN 412
+ T + K DA AL+NL N + AGI++ L + L+ +++L +L
Sbjct: 465 ENGTP-RGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSV 523
Query: 413 LAASAAGKEEM---NSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQE 469
LA + K + N+ P L+ +L T + +E A + L LC + + + +
Sbjct: 524 LANNQDAKSAIVKANTLPALIG----ILQTDQTRNRENAAAILLSLCKRDTEKLITIGRL 579
Query: 470 GVIPALVSISVNGSTRGRDKAQRLLMLFRE 499
G + L+ +S NG+ RG+ KA LL L R+
Sbjct: 580 GAVVPLMDLSKNGTERGKRKAISLLELLRK 609
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 196/433 (45%), Gaps = 71/433 (16%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P+E CPISL LM DPV+ ++GQTY+R I +W+ +GHSTCP + Q L L PN ++
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 189
LI+ WC + G+ DSP ES + + SC
Sbjct: 358 SLISQWCGVYGLQY-DSP---------------ESNEGMAECVAASCS------------ 389
Query: 190 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEG-ENLGQKCNIVEQIRLLLKDD 248
++ N R + +L +G EN+ K ++IRLL K
Sbjct: 390 ---------------SRAAMEANKATARI--LVRMLEDGSENV--KAVAAKEIRLLAKTG 430
Query: 249 EEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIP 308
++ R F G + L R L S + AQE AL NL++ +M G +
Sbjct: 431 KQNRAFIADLGAIPLLCRLLLS----NDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLR 486
Query: 309 LLEKMISNSNSHGA---ATALYLNLSFLDDAKPIIGSSHAVPFLVE-----LCKGKTEHQ 360
L+ ++ N + A A A +LS + + K +I + P VE L KG + +
Sbjct: 487 LIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNE---PGAVEELASMLTKGTS--R 541
Query: 361 CKLDALHALYNLSTIPSNIPNLL-SAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAG 419
K DA+ AL+NLST P + +L S +++ +QSL + +E++ L L +
Sbjct: 542 GKKDAVMALFNLSTHPESSARMLESCAVVALIQSLR---NDTVSEEAAGALALLMKQPSI 598
Query: 420 KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC-NGNEKCCQMVLQ-EGVIPALVS 477
+ S+ +++ L ++ G +E AVS L+ +C G Q V + G+ + +
Sbjct: 599 VHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQT 658
Query: 478 ISVNGSTRGRDKA 490
I++NG+ R + KA
Sbjct: 659 ITLNGTKRAKKKA 671
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 146/324 (45%), Gaps = 44/324 (13%)
Query: 67 PLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNY 126
P+ PE RCPISL+LM DPVI+++GQTYER I+KWL GH TCPK+Q+ L H LTPNY
Sbjct: 246 PVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNY 305
Query: 127 CVKGLIASWCEMNGVSVPD------------SPPDSLDLNY---------------WRLA 159
+K LIA WCE NG+ +P S D + R A
Sbjct: 306 VLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAA 365
Query: 160 LSEESTNSKSNEIVRSCKLKEMKVVPLEV------SGTIEESEYNDIENIYAQEDESGNN 213
E +K N R C + E +PL V +E + N+ E G
Sbjct: 366 AGELRLLAKRNVDNRVC-IAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAI 424
Query: 214 V-FERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAV 272
V D + VL G ++ L + D E +V GA G + AL+ LE
Sbjct: 425 VDAGAITDIVEVLKNGSMEARENAAATLFSLSVID--ENKVAIGAAGAIQALISLLE--- 479
Query: 273 CERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSH--GAATALYLNL 330
E ++ A A+FNL + NK + G++ L +++ ++ A A+ L
Sbjct: 480 -EGTRRGKKDAATAIFNLCIYQG-NKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAIL 537
Query: 331 SFLDDAKPIIGSSHAVPFLVELCK 354
S + K I + ++P LVE+ +
Sbjct: 538 STNQEGKTAIAEAESIPVLVEIIR 561
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 15/265 (5%)
Query: 240 QIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKE 299
++RLL K + + RV G + L+ L S + QE AL NL++N NK
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSP----DPRTQEHSVTALLNLSINEG-NKG 422
Query: 300 LMLAAGVIPLLEKMISNSNSHGA--ATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKT 357
++ AG I + +++ N + A A +LS +D+ K IG++ A+ L+ L + T
Sbjct: 423 AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGT 482
Query: 358 EHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASA 417
+ K DA A++NL N + GI+ L L +++LA+L L+ +
Sbjct: 483 -RRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQ 541
Query: 418 AGKE---EMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPA 474
GK E S P LV ++ TG +E A + L+ LC GN + + + G A
Sbjct: 542 EGKTAIAEAESIPVLVE----IIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVA 597
Query: 475 LVSISVNGSTRGRDKAQRLLMLFRE 499
L ++ NG+ R + KA LL L ++
Sbjct: 598 LKELTENGTDRAKRKAASLLELIQQ 622
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 209/491 (42%), Gaps = 71/491 (14%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGH------STCPKTQQKLPHLCLT 123
P E CPI+ LM DPV+++SGQT+ER+ ++ + G+ T P +P+L +
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMK 91
Query: 124 P---NYC---------------VKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEEST 165
++C V+G++ + + + P P D + L
Sbjct: 92 STIFSWCDRQKVDHPRPPDAAYVEGVVRARMDKDPNPSPGQSPGPGDKDPEPEILPPVEE 151
Query: 166 NSKSN-----EIVRSCKLKEMKVVPLEVSGTIEESEYNDIE--------------NIYAQ 206
NS S+ E +R+ M S TI +S Y+ + ++A
Sbjct: 152 NSPSDYDAVMEAIRARSKNSMSPTTSLESVTIGQSSYHPVRAVSMFSSSTTSSSSGVFAG 211
Query: 207 EDESGNNVFERY-------------QDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARV 253
D N ++ N L + + ++ +R + + E+ RV
Sbjct: 212 ADSPFRNAMSFSSTDHSSSPMSPEEEEIFNKLRGTDIFDHEQGLI-LLRKMTRSSEDLRV 270
Query: 254 FTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKM 313
+ +L FL S + R + Q A ++ NL++ +NK ++ +G +PLL +
Sbjct: 271 SLCTD----RILSFLRSLLVSRYNLVQTNAAASVVNLSLEK-QNKVKIVRSGFVPLLIDV 325
Query: 314 ISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALY 370
+ + + A AL+ +L+ D+ K +IG AV L+ + + + DA ALY
Sbjct: 326 LKSGTTEAQEHVAGALF-SLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALY 384
Query: 371 NLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEM---NSTP 427
+LS IPSN L+ AG + L S+ GD T + L VL NLAA GK M N+
Sbjct: 385 HLSLIPSNRTRLVRAGAVPTLLSMVRSGDS--TSRILLVLCNLAACPDGKGAMLDGNAVA 442
Query: 428 GLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGR 487
LV L V +E V+ L LC GN + + + G L+ + NG+ R +
Sbjct: 443 ILVGKLREVGGGDSEAARENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENGNERVK 502
Query: 488 DKAQRLLMLFR 498
+KA ++L+ R
Sbjct: 503 EKASKILLAMR 513
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 142/297 (47%), Gaps = 12/297 (4%)
Query: 208 DESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRF 267
D+SG + L G N K +IR L + E RV G G + LL
Sbjct: 464 DDSGTMTTSHTIKLVEDLKSGSN-KVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSL 522
Query: 268 LESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGA--ATA 325
L S QE AL NL+++ NK +++ G I L +++ N + A
Sbjct: 523 LYS----EEKLTQEHAVTALLNLSISE-LNKAMIVEVGAIEPLVHVLNTGNDRAKENSAA 577
Query: 326 LYLNLSFLDDAKPIIGSSHA-VPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLS 384
+LS L + IG S+A + LV L GK + K DA AL+NLS N ++
Sbjct: 578 SLFSLSVLQVNRERIGQSNAAIQALVNLL-GKGTFRGKKDAASALFNLSITHDNKARIVQ 636
Query: 385 AGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIE 444
A + L L P D +K++A+L NL+A G++ + G + L +D G
Sbjct: 637 AKAVKYLVELLDP-DLEMVDKAVALLANLSAVGEGRQAIVREGG-IPLLVETVDLGSQRG 694
Query: 445 QEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQR 501
+E A S L LC + K C +VLQEG IP LV++S +G+ R ++KAQ+LL FR QR
Sbjct: 695 KENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQR 751
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Query: 66 MPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPN 125
+ +PP RCP+S +LM DPVI+ASGQT++R I+KWL +G + CP+T+Q L H L PN
Sbjct: 236 ISIPPY-FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 294
Query: 126 YCVKGLIASWCEMNGVSV 143
Y VK +IASW E N +++
Sbjct: 295 YTVKAMIASWLEANRINL 312
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 186/443 (41%), Gaps = 72/443 (16%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P++ CPISL LM DPVII++GQTY+R I +W+ +GH TCPKT Q L + PN +K
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 189
LI WC +G+S DS + ++ ++ + ++N+ S +K + + S
Sbjct: 366 NLIVQWCTASGISYESEFTDSPNESFASALPTKAAV--EANKATVSILIKYLA----DGS 419
Query: 190 GTIEESEYNDIENIYAQEDESGNNVFE--RYQDFLNVLNEGENLGQKCNIVEQIRLLLKD 247
+ +I + E+ + E +L + Q+ ++ + L + +
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYE 479
Query: 248 DEEARVFTGANGF--VVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAG 305
++R+ + +V++L V AQE A LF+L+ + K + +
Sbjct: 480 KNKSRIMEEGDCLESIVSVL------VSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQ 533
Query: 306 VIPLLEKMISNSNSHG---AATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCK 362
+ L ++ N G A TALY
Sbjct: 534 CVEALALLLQNGTPRGKKDAVTALY----------------------------------- 558
Query: 363 LDALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPG--DPMWTEKSLAVLLNLAASAAG 419
NLST P N ++ G +S L +L G + +L V +L A A G
Sbjct: 559 --------NLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGAEAIG 610
Query: 420 KEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC-NGNEKCCQMVLQEGVIPALV-S 477
KE+ V+GL ++ G +E AV+ L LC +G + VL+ I L+ +
Sbjct: 611 KED-----SAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQT 665
Query: 478 ISVNGSTRGRDKAQRLLMLFREQ 500
+ G+ R R KA L +F+ +
Sbjct: 666 LLFTGTKRARRKAASLARVFQRR 688
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 193/456 (42%), Gaps = 76/456 (16%)
Query: 68 LPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYC 127
L ++LRCPISL++M DPV++ SG TY+R I KW + G+ TCPKT + L L N+
Sbjct: 277 LNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFS 336
Query: 128 VKGLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLE 187
VK +I S+ + NGV + +D+ +L+ E + E +
Sbjct: 337 VKQVIQSYSKQNGVVMGQKGKKKVDVAE---SLAAEEAGKLTAEFLAG------------ 381
Query: 188 VSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKC----NIVEQIRL 243
E I E+E + E + +L + + C +VE +
Sbjct: 382 -------------ELIKGDEEEMVKALVE-----IRILTKTSTFYRSCLVEAGVVESLMK 423
Query: 244 LLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLA 303
+L+ D+ R+ A + ++ + + ++ G + L +N+ +E
Sbjct: 424 ILRSDD-PRIQENA---MAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRE---- 475
Query: 304 AGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGS-SHAVPFLVELCK----GKTE 358
S + AA YL S L D +IG S A+P LV + K G +
Sbjct: 476 -------------SRQYAAAALFYL--SSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSA 520
Query: 359 HQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPM---WTEKSLAVLLNLAA 415
+ L A+ +L L P N +L+AGI+ L L V + + T S+A+L +A
Sbjct: 521 KRNALIAIRSL--LMNQPDNHWRILAAGIVPVLLDL-VKSEEISDGVTADSMAILAKMAE 577
Query: 416 SAAGKEEMNSTPGLVSGLATVLDTGEL--IEQEQAVSCLFLLCN--GNEKCCQMVLQEGV 471
G + GL + +L + E+ ++ V+ L LC+ G++ + +
Sbjct: 578 YPDGMISVLRRGGLKLAV-KILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSI 636
Query: 472 IPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPP 507
+ +L + S NG G KA L+ + E ++R P
Sbjct: 637 MGSLYTASSNGELGGGKKASALIKMIHEFQERKTGP 672
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 180/447 (40%), Gaps = 93/447 (20%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P + RCPI+L+LM DPV++A+GQTY+R I+ W+ GH+TCPKT Q L H L PN +K
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALK 334
Query: 130 GLIASWC-------EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMK 182
LI WC E+ G + P CK + ++
Sbjct: 335 NLIVLWCRDQKIPFELYGDGGGEPAP---------------------------CK-EAVE 366
Query: 183 VVPLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIR 242
+ VS IE+ D S VFE L L + + + + C I E
Sbjct: 367 FTKMMVSFLIEKLSVAD----------SNGVVFE-----LRALAKSDTVARAC-IAEA-- 408
Query: 243 LLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGAM-ALFNLAVNNNRNKELM 301
G + L+R+L + C + +I A+ + NL++ +M
Sbjct: 409 ----------------GAIPKLVRYLATE-CP----SLQINAVTTILNLSILEQNKTRIM 447
Query: 302 LAAG----VIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIG-SSHAVPFLVELCK-G 355
G VI +L + AA L+ +L+ + + +G + V LV+L K G
Sbjct: 448 ETDGALNGVIEVLRSGATWEAKANAAATLF-SLAGVSAYRRRLGRKARVVSGLVDLAKQG 506
Query: 356 KTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMW-TEKSLAVLLNLA 414
T K DAL A+ NL N+ + AG+ + GD + ++
Sbjct: 507 PT--SSKRDALVAILNLVAERENVGRFVEAGV------MGAAGDAFQELPEEAVAVVEAV 558
Query: 415 ASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC--NGNEKCCQMVLQEGVI 472
G +++ L+ L V+ G +E A + L +C G+E +M G+
Sbjct: 559 VRRGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIE 618
Query: 473 PALVSISVNGSTRGRDKAQRLLMLFRE 499
+ + G+ RG KA L+ R
Sbjct: 619 RVIWEMIGAGTARGGRKAASLMRYLRR 645
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 180/448 (40%), Gaps = 80/448 (17%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P RCPISL LM DPV I++GQTY+R I+ W++ G++TCP T+ L L PN+ ++
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 130 GLIASWC---EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRS--CKLKEMKVV 184
LI WC NGV +P D R LS+ S + ++ VRS ++ ++
Sbjct: 75 RLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRLR-- 132
Query: 185 PLEVSGTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLL 244
G +SE N VL G N + +R+L
Sbjct: 133 -----GLARDSEKN------------------------RVLIAGHNAREIL-----VRIL 158
Query: 245 LKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE---IGAMA--LFNLAVNNNRNKE 299
D E + + +ALL L E + A + +G M LF+ ++ N
Sbjct: 159 FADIETTSLSSELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAA 218
Query: 300 LMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPII-GSSHAVPFLVELCKGKTE 358
L+E +++ + S D K II GS +++L K
Sbjct: 219 --------ALIEMVLTGAKSM--------------DLKLIISGSDSIFEGVLDLLKNPIS 256
Query: 359 HQCKLD-ALHALYNLSTIPSNIPNLLSAGIISGL-QSLAVPGDPMWTEKSLAVLLNLA-- 414
+ L + A++ L + +SAG L LA D TE+ LA + L
Sbjct: 257 SRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRL 316
Query: 415 --ASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVI 472
AA E + P +V + V D E A L LC E+C G++
Sbjct: 317 PEGCAAFGEHALTVPLMVKTILRVSDRA----TEYAAGALLALCTAEERCRDEAAAAGLV 372
Query: 473 PALVSISVNGST-RGRDKAQRLLMLFRE 499
L+ + + T R + KAQ LL L R+
Sbjct: 373 TQLLLLVQSDCTERAKRKAQMLLKLLRD 400
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 181/428 (42%), Gaps = 72/428 (16%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P + RCPISL++M DPVI+ SG T++R+ I++W+ G+ TCP T KLP L TP
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPIT--KLP-LSETPYL--- 59
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 189
+P+ SL LN+ ++L +ES+ ++ +
Sbjct: 60 -------------IPNHALRSLILNFAHVSL-KESSRPRTQQ------------------ 87
Query: 190 GTIEESEYNDIENIYAQEDESGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDE 249
E S I +S +N K + ++ L K D
Sbjct: 88 ---EHSHSQSQALISTLVSQSSSN------------------ASKLESLTRLVRLTKRDS 126
Query: 250 EARVFTGANGFVVALLRFLESAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPL 309
R +G V A L ++S N QE L NL++ ++ NK ++A GVI
Sbjct: 127 SIRRKVTESGAVRAALDCVDSC----NQVLQEKSLSLLLNLSLEDD-NKVGLVADGVIRR 181
Query: 310 LEKM--ISNSNSHGAATALYLNLSFLDDAKPIIGS-SHAVPFLVELCKGKTEHQCKLDAL 366
+ + + + + A L +L+ ++ K IGS A+ LV L + + + K ++
Sbjct: 182 IVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERK-ESA 240
Query: 367 HALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEMNST 426
ALY L + P N ++ G + L A G E+++ VL L G+EEM+
Sbjct: 241 TALYALCSFPDNRKRVVDCGSVPILVEAADSG----LERAVEVLGLLVKCRGGREEMSKV 296
Query: 427 PGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRG 486
G V L VL G L + ++ L LC + + V +EGV+ N S +
Sbjct: 297 SGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFGFEDNESEKI 356
Query: 487 RDKAQRLL 494
R A L+
Sbjct: 357 RRNATILV 364
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
PE+ +C +S +MYDPVII+SG T+ER+ I+KW +G+ +CP +++KL L PN +K
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 130 GLIASWCEMNGVSVPD 145
I+ WC NG+ V D
Sbjct: 280 SQISEWCAKNGLDVQD 295
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 9/330 (2%)
Query: 234 KCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEI--GAMALFNLA 291
+ +VE +R + A + F+ L+ +L++A+ ERN A EI G + L
Sbjct: 392 QIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNAL-ERNGTAGEIIKGGLDLLLAF 450
Query: 292 VNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVE 351
++ NR L V + + + A + LS I SS ++ L++
Sbjct: 451 LSGNRRAIESLEEEVFKMFSVFLESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLK 510
Query: 352 LCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLL 411
+ + + EH + A+ L NLS+ ++S I L S ++ + S+ +L
Sbjct: 511 IVESQAEH-LQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFL--QQKVFCKHSIIILK 567
Query: 412 NLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLCNGNEKCCQMVLQEG- 470
NL ++ G+ + TP ++ +A +L++ EQE A+S L LC + C +V++E
Sbjct: 568 NLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREAT 627
Query: 471 -VIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGQQDDDSSEKLKPTYTPTP 529
+ +L+ IS NG+ + A LL E ++ + + + + TP
Sbjct: 628 DIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEVSSRPEGRTTASPTSQVVTP 687
Query: 530 DHAPESKPLCKSISRRKM-GKAFSFLWKSK 558
PE + S + + G FS L K K
Sbjct: 688 VTHPEPVKITPSPKKSGLFGFNFSSLKKKK 717
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG-HSTCPKTQQKLPHLCLTPNYCV 128
P RCPISL+LM DPV + +GQTY+R IE W+S G ++TCP T+ L L PN+ +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 129 KGLIASWC---EMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRS 175
+ LI WC NGV +P D R LS+ S + ++ VRS
Sbjct: 75 RRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 124
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 123/294 (41%), Gaps = 40/294 (13%)
Query: 68 LPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYC 127
L E+L CPISL++M DPV+I +G TY+R I KW G+ TCP T + L L N
Sbjct: 287 LKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVS 346
Query: 128 VKGLIASWCEMNGV----------SVPDSPPDSLDLN---------------------YW 156
V+ +I C+ NG+ S D P+SL +
Sbjct: 347 VRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIY 406
Query: 157 RLALSEESTNSKSNEIVRSCKLKEMKVVPL-----EVSGTIEESEYNDIENIYAQEDESG 211
R A+ E +K++ RSC +K V PL V I+E+ I N+
Sbjct: 407 R-AVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKS 465
Query: 212 NNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESA 271
E + + +LNEG + + L ++ +R+ + L+ ++
Sbjct: 466 KIAGEGLKILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGD 525
Query: 272 VCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATA 325
+ A+ +A+ L + ++ N +LAAG +P+L ++ + G TA
Sbjct: 526 --DYGDSAKRSALLAVMGLLMQSD-NHWRVLAAGAVPILLDLLRSGEISGGLTA 576
>sp|Q9FL17|PUB40_ARATH U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40
PE=2 SV=2
Length = 550
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 191/471 (40%), Gaps = 53/471 (11%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P E CPIS LM DP+I++SG +YER C+ + G + P + PN +K
Sbjct: 59 PAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTPPPDFS----TVIPNLALK 114
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVPLEVS 189
I SWCE P P +S LAL E+ + + ++ ++ P V
Sbjct: 115 SAIHSWCERRCFP-PPKPLNSAAAEKLILALMEKKPQRRKVSVSEKELIQAIRDKP-SVR 172
Query: 190 GTIEESEYNDIENIYAQEDESGNNVFERYQDFL-------------------NVLNEGEN 230
+E + N + + R N+ E E
Sbjct: 173 LNHAATELDRRPNYFNSSSDESIASSSRTLQLTTKPSCFSSPSSGEIESLEPNLTPEEEA 232
Query: 231 L--GQKCNIVEQI-------RLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQE 281
L K N + +I R + + DE +R+ + A L+S + R + Q
Sbjct: 233 LLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISA----LKSLIVSRYATVQV 288
Query: 282 IGAMALFNLAVNNNRNKELMLAAGVIPLLEKMIS----NSNSHGAATALYLNLSFLDDAK 337
L NL++ + NK ++ +G++P L ++ + H A + +L+ D+ K
Sbjct: 289 NVTAVLVNLSLEKS-NKVKIVRSGIVPPLIDVLKCGSVEAQEHSA--GVIFSLALEDENK 345
Query: 338 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 397
IG + L+ L + TE + D+ ALY+LS + SN L+ G + L +
Sbjct: 346 TAIGVLGGLEPLLHLIRVGTE-LTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSL 404
Query: 398 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDTGELIEQEQAVSCLFLLC- 456
G + + L +L N+A+ + + + G V + VL + + SC+ +L
Sbjct: 405 GQMIG--RVLLILCNMASCPVSRPALLDSGG-VECMVGVLRRDREVNESTRESCVAVLYG 461
Query: 457 ---NGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRD 504
+G + + + + LV + +G R + KA+R+L + R + + D
Sbjct: 462 LSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLRAKIEDD 512
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 46 RQLSKLCSFNFRPNNRRSGQMPLP-PEELRCPISLQLMYDPVIIASGQTYERICIEKWLS 104
R L++L + R S + P+E +C +S +M DPVII SGQTYE+ I +WL
Sbjct: 50 RILNRLKIVESKKRKRESDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL- 108
Query: 105 DGHSTCPKTQQKLPHLCLTPNYCVKGLIASWCEMNGVSVPDSPPDSLD 152
+ TCP +Q L +CLTPN+ + LI WC N P P +D
Sbjct: 109 NHDLTCPTAKQVLYRVCLTPNHLINELITRWCLANKYDRPAPKPSDID 156
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Query: 274 ERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLS 331
+ N QE ALFN++ L VIPLL K + + + AT +LS
Sbjct: 227 DSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLS 286
Query: 332 FLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNL 372
+D K IIG+S A+ L++L + DAL A+ +L
Sbjct: 287 DIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDL 327
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 58 PNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKL 117
P + ++ +PPE +CPIS+ LM DPVII++G TY+R+ IE W++ G+ TCP T L
Sbjct: 21 PESEPESEITIPPE-FQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVL 79
Query: 118 PHLCLTPNYCVKGLIASWCEMNG 140
PN+ ++ +I WC G
Sbjct: 80 TTFDQIPNHTIRKMIQGWCVEKG 102
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 35 GVHNGNEHAFDRQLSKLC-------SFNFRPNNRRSGQMPLPPEELRCPISLQLMYDPVI 87
+++ NE++ S LC SFN P + PP++ CPI+ Q+ DPV
Sbjct: 470 SMNHENENSLILNGSSLCESDDGYQSFNSLPKLEKLSMGSKPPKDFVCPITGQIFCDPVT 529
Query: 88 IASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCL-TPNYCVKGLIASWCEMN 139
+ +GQTYER I++WL G++TCP T+Q L L NY +K LI SW E N
Sbjct: 530 LETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYVLKRLITSWKEQN 582
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 43/67 (64%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P + +CPIS +LM DPVIIASG TY+R IEKW G+ TCP T L L PN+ ++
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 130 GLIASWC 136
+I WC
Sbjct: 94 RMIQGWC 100
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 39/331 (11%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P CPISL+ M DPV + +GQTYER+ I KW + GH TCP T Q+L +TPN +
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 130 GLIASWCEMNGVSVPDSPPDSLDLNYWRLALSEESTNSKSNEIVRSCKLKEMKVVP---- 185
LI +W V + D A+ T K+ R L E+K +
Sbjct: 125 HLIYTWFSQKYVLMKKRSED-----VQGRAIEILGTLKKAKGQARVHALSELKQIVIAHL 179
Query: 186 LEVSGTIEESEYNDIENIYA---------------------QEDESGNNVFERYQDFLNV 224
+ +EE + I ++ + +SG + +++
Sbjct: 180 MARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVDM 239
Query: 225 LNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLESAVCERNSYAQEIGA 284
LN+G N K N IR L+++ ++ +V L+R ++ RN + A
Sbjct: 240 LNDGSN-ETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKR-HRNGVSP---A 294
Query: 285 MALFNLAVNNNRNKELMLAAGVIPLLEKMISNSNSHGAATALYLNLSFLDDAKPIIG--- 341
+ L + + + LM++ G +P L ++ + + AL++ + D + +
Sbjct: 295 LRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKD 354
Query: 342 SSHAVPFLVELCKGKTEHQCKLDALHALYNL 372
S++ +P+ V + +E+ C AL L+++
Sbjct: 355 SANTIPYTVRVLMRVSEN-CTNYALSILWSV 384
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 65 QMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG-HSTCPKTQQKLPHLCLT 123
++ +PP L CPISL++M DPVI+++G TY+R IEKWL G ++CP T+Q + LT
Sbjct: 9 EIEIPPFFL-CPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 124 PNYCVKGLIASWCEMNG 140
PN+ ++ LI SWC +N
Sbjct: 68 PNHTLRRLIQSWCTLNA 84
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 69 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCL-TPNYC 127
PP++ CPI+ Q+ DPV + +GQTYER I++WL G++TCP T+Q L L NY
Sbjct: 513 PPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYV 572
Query: 128 VKGLIASWCEMN 139
+K LI SW E N
Sbjct: 573 LKRLIVSWKEQN 584
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDG-HSTCPKTQQKLPHLCLTPNYCV 128
P CPISL +M DPVI+++G TY+R IEKWL G ++CP T+Q + LTPN+ +
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 129 KGLIASWCEMNG 140
+ LI SWC +N
Sbjct: 68 RRLIQSWCTLNA 79
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 69 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCL-TPNYC 127
PP++ CPI+ Q+ DPV + +GQTYER I++WL G++TCP T+Q L L NY
Sbjct: 511 PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSASILPKTNYV 570
Query: 128 VKGLIASWCEMN 139
+K LI SW E N
Sbjct: 571 LKRLITSWKEQN 582
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P+E C +S +M +PVIIASGQTYE+ I +WL TCPKT+Q L H PN+ +
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLIS 131
Query: 130 GLIASWCEMN 139
LI WC +N
Sbjct: 132 DLITQWCLVN 141
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 10/225 (4%)
Query: 280 QEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISNSN--SHGAATALYLNLSFLDDAK 337
QE ALFNL++ + + VIPLL K + + A A +LS +D K
Sbjct: 227 QENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNK 286
Query: 338 PIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVP 397
IIG+S AV L++L + K +A ++NL + N ++SAG+I
Sbjct: 287 IIIGNSEAVKALIDLIEEGDLLATK-EATSTVFNLCIVLENKGKVVSAGLIHAATKKIKA 345
Query: 398 GDPMWTEKSLAVLLNLAASAAGKEEMNSTPGLVSGLATVLDT-GELIEQEQAVSCLFLLC 456
G + ++ L++L ++ EEM+ G + L ++L L+ E AV +F +
Sbjct: 346 GSNV--DELLSLLALISTHNRAVEEMDKL-GFIYDLFSILRKPSSLLTGENAVVIVFNMY 402
Query: 457 NGNEKCCQMVL---QEGVIPALVSISVNGSTRGRDKAQRLLMLFR 498
+ N ++ + +E ++ GS R KAQ +L +
Sbjct: 403 DRNRDRSRLKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIK 447
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%)
Query: 65 QMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTP 124
++P P CPISL+ M DPV + +GQTYER I KW + GH TCP T Q+L +TP
Sbjct: 56 ELPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTP 115
Query: 125 NYCVKGLIASW 135
N + LI +W
Sbjct: 116 NKTLHQLIYTW 126
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P+E C +S ++M +P++IASGQT+E+ I +WL TCP+T+Q L H + PN+ +
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVLYHRFMIPNHLIN 124
Query: 130 GLIASWCEMNGVSVPDSPPDSLDL 153
+I WC ++ P + + +DL
Sbjct: 125 EVIKEWCLIHNFDRPKTSDEVIDL 148
Score = 39.7 bits (91), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 306 VIPLLEKMISN----SNSHGAATALYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQC 361
V+PLL K + + H AAT +LS+ D K IIG+S + L+ + + + +
Sbjct: 242 VLPLLAKYMKQGTVLTRIHSAATVN--SLSYTDSNKIIIGNSEVLKALIHVIE-EGDSLA 298
Query: 362 KLDALHALYNLSTIPSNIPNLLSAGIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGK- 420
+A AL NL + +S G+I G ++++LL+L A + +
Sbjct: 299 TSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGS------NVSMLLSLLAFVSTQN 352
Query: 421 ----EEMNSTPGLVSGLATVL-DTGELIEQEQAVSCLFLLCNGNEKCCQMVLQE 469
EEM++ GL+ L ++L ++ L+ E AV ++ +C + +VL+E
Sbjct: 353 HQTTEEMDNL-GLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLRE 405
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 25/309 (8%)
Query: 210 SGNNVFERYQDFLNVLNEGENLGQKCNIVEQIRLLLKDDEEARVFTGANGFVVALLRFLE 269
S + E + N L E Q+ ++ +R + + ++EARV + +L L+
Sbjct: 218 STSTATEEDEVIYNKLKSSEIFDQEQGLI-MMRKMTRTNDEARVSLCSP----RILSLLK 272
Query: 270 SAVCERNSYAQEIGAMALFNLAVNNNRNKELMLAAGVIPLLEKMISN----SNSHGAATA 325
+ + R S Q +L NL+++ +NK ++ G +P+L ++ + + H A T
Sbjct: 273 NMIVSRYSLVQTNALASLVNLSLDK-KNKLTIVRLGFVPILIDVLKSGSREAQEHAAGTI 331
Query: 326 LYLNLSFLDDAKPIIGSSHAVPFLVELCKGKTEHQCKLDALHALYNLSTIPSNIPNLLSA 385
L+L DD K IG A+ L+ + + + D+ ALY+L+ +N L+
Sbjct: 332 FSLSLE--DDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRL 389
Query: 386 GIISGLQSLAVPGDPMWTEKSLAVLLNLAASAAGKEEM---NSTPGLVSGLATVLDTGEL 442
G + L S+ G+ ++L V+ NLA + G+ M N+ LV L T E
Sbjct: 390 GAVPALFSMVRSGES--ASRALLVICNLACCSEGRSAMLDANAVAILVGKLREEW-TEEP 446
Query: 443 IE-------QEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLM 495
E +E V+ LF L + + + + + + L + G+ R R+KA+++L
Sbjct: 447 TEARSSSSARENCVAALFALSHESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKILQ 506
Query: 496 LFREQRQRD 504
L RE+ D
Sbjct: 507 LMRERVPED 515
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 69 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPK---TQQKLPHLC-LTP 124
PP E CPIS +M DPV+++SGQT+ER+C++ + + PK ++ LP + P
Sbjct: 33 PPVEFLCPISKSVMSDPVVVSSGQTFERVCVQ--VCRDLNFIPKLNDDEESLPDFSNIIP 90
Query: 125 NYCVKGLIASWCEMNGVSVPDSPPD 149
N +K I +WC+ GVS P PPD
Sbjct: 91 NLNMKSTIDTWCDTVGVSRP-QPPD 114
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%)
Query: 56 FRPNNRRSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQ 115
R RS + P+ CPISL++M DP + A G TYE I WL GH T P T
Sbjct: 312 LRKEVSRSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNT 371
Query: 116 KLPHLCLTPNYCVKGLIASW 135
KL H L PN ++ I W
Sbjct: 372 KLHHTKLVPNLALRSAIQEW 391
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P +CPISL +M PV +++G TY+R+ I++WL DG++TCP T Q L + PN +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 130 GLIASWCE-MNGVSVPDSP 147
LI W + +N + +SP
Sbjct: 72 RLIDHWSDSINRRADSESP 90
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLC-LTPNYCV 128
P CPISL++M DPV SG TY+R I KWL S CP T+Q LP LTPN+ +
Sbjct: 11 PNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVPS-CPVTKQPLPLDSDLTPNHML 69
Query: 129 KGLIASWC---EMNGV---SVPDSPPDSLDL 153
+ LI WC E GV S P PP L++
Sbjct: 70 RRLIQHWCVENETRGVVRISTPRVPPGKLNV 100
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 69 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 128
PP CPIS ++M +P + A G TYE + +WL +GH T P T KL H L PN+ +
Sbjct: 497 PPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHAL 556
Query: 129 KGLIASWCEMNG 140
+ I W + N
Sbjct: 557 RSAIQEWLQRNS 568
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 69 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 128
PP+ CPI+ +M DP + A G TYE I +W GH T P ++LPH L PN +
Sbjct: 353 PPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLAL 412
Query: 129 KGLIASWCEMN 139
+ I W ++
Sbjct: 413 RSAIQEWLQLR 423
>sp|Q9SGT2|PUB58_ARATH Putative U-box domain-containing protein 58 OS=Arabidopsis thaliana
GN=PUB58 PE=2 SV=3
Length = 420
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%)
Query: 69 PPEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCV 128
PP CPI+ ++M DP A G TYE I KWLS GH T P T +L HL L PN +
Sbjct: 353 PPSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRAL 412
Query: 129 KGLI 132
+ I
Sbjct: 413 RSAI 416
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P RCPISL +M PV + +G TY+R I++WL G++TCP T Q L + PN ++
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 130 GLIASWCE 137
LI W +
Sbjct: 71 RLIEIWSD 78
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 71 EELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVKG 130
E+ +CPIS+++M DP + A G TYE KWL G T PKT + L + L PN+ ++
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 131 LIASWCEMN 139
+I W E N
Sbjct: 295 IIKDWLEKN 303
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P+E CPI+ +LM DPVI A G +YE+ +E W+S+ + P T LP L LTPN +K
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNRTLK 464
Query: 130 GLIASWCE 137
I+ W E
Sbjct: 465 MAISRWLE 472
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%)
Query: 70 PEELRCPISLQLMYDPVIIASGQTYERICIEKWLSDGHSTCPKTQQKLPHLCLTPNYCVK 129
P +CPISL +M PV + +G TY+R I++WL G++TCP T Q L PN ++
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 130 GLIASWCEMNG 140
LI W + G
Sbjct: 73 RLINIWSDSIG 83
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,957,447
Number of Sequences: 539616
Number of extensions: 9369230
Number of successful extensions: 23834
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 23365
Number of HSP's gapped (non-prelim): 396
length of query: 565
length of database: 191,569,459
effective HSP length: 123
effective length of query: 442
effective length of database: 125,196,691
effective search space: 55336937422
effective search space used: 55336937422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)