BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008441
(565 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQ--GMEPTCPHEGCKSKLEVESC 368
C ICL + D G +S++GC H +C C+ + E +R C H C + + V
Sbjct: 1561 CPICLSEVDDG--YSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADM 1618
Query: 369 RIFLTL-KLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRLG 426
R L+ KL E+ + + + K+ +C P C ++ + + S F+
Sbjct: 1619 RALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQE--SGEPFI----- 1671
Query: 427 ARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNHL 486
C CH C C + +H +TC YK+ NP D+ LK A ++C C
Sbjct: 1672 ---CGACHSETCTRCHLEYHPLITCERYKKFKENP---DLSLKDWAKGKDVKECPICKST 1725
Query: 487 IELAEGCFHMTCRCGHEFCYNC 508
IE +GC H+ CRCG C+ C
Sbjct: 1726 IEKTDGCNHLQCRCGKHICWTC 1747
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 26/258 (10%)
Query: 289 AAINSQMTVPAEISRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQ 348
A + + M + A I K+ N +C+ICLED F++ C HRYC C K ++E K+ +
Sbjct: 118 AGVPNVMKLNATIVE-KSGNVSCLICLEDYPPTQTFAL-ICNHRYCLPCYKNYLEIKVSE 175
Query: 349 GME---PTCPHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSA 404
G E CP CK + ++ + ++ ++FE +N + ++ + +V +CP P C
Sbjct: 176 GPECIYTPCPAPKCKVIVHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIY 235
Query: 405 LMSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTE 464
+ ER + V + G + C C+ D ++ H C + E
Sbjct: 236 SIRCDRKERKEA----VNCKCGFQYCFNCN-----DYEIGDHMPCPCSQVDKWLQKASDE 286
Query: 465 DVKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR-----CGHEFCYNCGAEWKNKKATC 519
+ + ++ ++C +C IE GC HMTCR CG EFC+ C W +T
Sbjct: 287 SENVTWMLANT--KKCPECRSPIEKNGGCMHMTCRKNAGGCGFEFCWLCRGPWTEHGSTT 344
Query: 520 ----SCPLWDEDNILDDD 533
+C +D+ +DD
Sbjct: 345 GGYYNCNKYDKSKAKEDD 362
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGC--KSKLEV 365
+C +CL + V M +I C +C LC+K+++E +++G+E +CP C + L+
Sbjct: 19 SCKLCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQE 78
Query: 366 ESCRIFLTLKLFEIWN--QRMKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGR 423
+ ++ + + Q KE L+ + +CP C A+ E + + V
Sbjct: 79 NEIECMVAAEIMQKYKKLQFEKEILLDPC-RTWCPSSSCQAVCKLQE--KGIQNPQLV-- 133
Query: 424 RLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKC 483
+C+ C FC CK WH C + P KSL ++C KC
Sbjct: 134 -----QCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPKC 188
Query: 484 NHLIELAEGCFHMTCR-CGHEFCYNC 508
IE EGC M C+ C H FC+ C
Sbjct: 189 KVYIERDEGCAQMMCKNCKHAFCWYC 214
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 22/223 (9%)
Query: 305 KTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTCPHEGCKS 361
+ +N C IC E + + C H YC C +I K+ G + CP C +
Sbjct: 122 RKVNIQCGICFESYTREEIARV-SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSA 180
Query: 362 KLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSF 420
+ + K+ E +++ + + + +K+ +CP P C + E SSS
Sbjct: 181 AVGKDMIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAV---EFGGSESSSYD 237
Query: 421 VGRRLGARKCTKCHRRFCIDCKVPWHNNMTC-IYYKRLNPNPPTEDVKLKSLASSNLWRQ 479
V C RFC +C H+ + C K + N + K LA+S +
Sbjct: 238 VS--------CLCSYRFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANS---KP 286
Query: 480 CVKCNHLIELAEGCFHMTCR--CGHEFCYNCGAEWKNKKATCS 520
C +C IE +GC HMTC CGHEFC+ C ++ C+
Sbjct: 287 CPECKRPIEKNDGCNHMTCSAPCGHEFCWICLKAYRRHSGACN 329
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 297 VPAEISRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TC 354
VP+ ++ KT+ C +C+ED ++ + C HR+C C H K+ +G C
Sbjct: 109 VPSLVTSKKTMK--CDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILC 166
Query: 355 PHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPY-PKCSALMSKSEIE 412
CK+ + + R ++ +L + +++ + E+ + V +CP P C + + K E
Sbjct: 167 MAHECKAICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIE-- 224
Query: 413 RDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLA 472
D VG C +FC C H+ +C+ +K E + +
Sbjct: 225 -DGHDVVEVG--------CSCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWIT 275
Query: 473 SSNLWRQCVKCNHLIELAEGCFHMTCRCGHEFCYNCG 509
+ + C KC+ I+ +GC MTC+CG FC+ CG
Sbjct: 276 VNT--KLCPKCSKPIQKRDGCNLMTCKCGQHFCWLCG 310
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 20/274 (7%)
Query: 253 ISVLVDQVSLLEKRFSYFKPRHVARNDMKYVYELARAAINSQMTVPAEISRGKTINETCV 312
I + +QV L + F + + R + R L +A + + E+ + TC
Sbjct: 76 IDLTREQVLGLYRYFKWNRERLLERYIDAPEESLQKAGVGLSGSKQREVVHHEG---TCE 132
Query: 313 ICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEPT-CPHEGCKSKLEVESCRIF 371
IC D FS + C H +C C +++++ ++ +G CP E C + ++S
Sbjct: 133 ICY-DEGCLPFFSAE-CDHEFCLACYRQYLDSRISEGESVIQCPEESCTQIVSIQSITKV 190
Query: 372 LTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRLGARKC 430
L K + +++ + + + + + +CP P C + + AS SS V
Sbjct: 191 LDEKSLDRYHRLLDRSFVDDNDHLRWCPAPDCEFAIECHVTQ--ASLSSVV-----PTVT 243
Query: 431 TKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNHLIELA 490
C ++FC C H C K + +D + + +N ++C KC+ IE
Sbjct: 244 CNCGKQFCFGCGHDNHQPTICPLVK-IWLQKCQDDSETANWIHANT-KECPKCSTTIEKN 301
Query: 491 EGCFHMTC-RCGHEFCYNCGAEWK---NKKATCS 520
GC HMTC +C +EFC+ C W N TC+
Sbjct: 302 GGCNHMTCKKCKYEFCWVCLGPWTEHGNNWYTCN 335
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 308 NETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGM--EPTCPHEGCKSKLEV 365
++ C +C + +G F C H +C C + E ++ QG+ + C + C ++
Sbjct: 150 SQMCPVC-ASSQLGDKFYSLACGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPE 208
Query: 366 ESCRIFLTLKLFEIWNQRM--KEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGR 423
+ +T + Q+ K+ + E +CP P C ++ SEI +
Sbjct: 209 DLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQIIVQSSEISAKRAI------ 262
Query: 424 RLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKC 483
C CH FC C + +H C K+ +D + + S++ + C KC
Sbjct: 263 ------CKACHTGFCFRCGMDYHAPTDCQVIKKW-LTKCADDSETANYISAHT-KDCPKC 314
Query: 484 NHLIELAEGCFHMTC-RCGHEFCYNCGAEWK 513
+ IE GC HM C C H+FC+ C +WK
Sbjct: 315 HICIEKNGGCNHMQCFNCKHDFCWMCLGDWK 345
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGC--KSKLEV 365
+C +CL + V M +I C +C LC+K+++E +++G+E +CP C + L+
Sbjct: 19 SCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 78
Query: 366 ESCRIFLTLKLFEIWN--QRMKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGR 423
+ ++ + + Q +E L + +CP C A+ ++
Sbjct: 79 NEIECMVAAEIMQRYKKLQFEREVLFDPC-RTWCPASTCQAVCQLQDVGLQTPQPV---- 133
Query: 424 RLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKC 483
+C C FC CK WH C + P K ++C KC
Sbjct: 134 -----QCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKC 188
Query: 484 NHLIELAEGCFHMTCR-CGHEFCYNC 508
IE EGC M C+ C H FC+ C
Sbjct: 189 KVYIERDEGCAQMMCKNCKHAFCWYC 214
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 298 PAEISRGKTINET-------CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKL-RQG 349
P++ SR + +N C IC + + ++ C H++C C +++ K+ +G
Sbjct: 138 PSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIIEEG 196
Query: 350 MEPT--CPHEGCKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSAL 405
M T CP GC ++ + R+ K+ + + + + + +CP P C +
Sbjct: 197 MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHV 256
Query: 406 MSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTED 465
+ DA +C KC R+FC +C WH+ + C + K+ +D
Sbjct: 257 VKVQY--PDAKPV----------RC-KCGRQFCFNCGENWHDPVKCKWLKKW-IKKCDDD 302
Query: 466 VKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSC 521
+ + ++N ++C KC+ IE GC HM CR C EFC+ C W+ + A +C
Sbjct: 303 SETSNWIAANT-KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 361
Query: 522 PLWDEDN 528
++ED+
Sbjct: 362 NRYNEDD 368
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 239 VECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKK 298
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 299 --CDDDSETS 306
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 302 SRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKL-RQGMEPT--CPHEG 358
+R ++ C IC + + ++ C H++C C +++ K+ +GM T CP G
Sbjct: 149 TRSSALDMPCQICYLNYPNSYFTGLE-CGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHG 207
Query: 359 CKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDAS 416
C ++ + R+ K+ + + + + + +CP P C ++ DA
Sbjct: 208 CDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQY--PDAK 265
Query: 417 SSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNL 476
KC R+FC +C WH+ + C + ++ +D + + ++N
Sbjct: 266 PVH-----------CKCGRQFCFNCGENWHDPVKCKWLRKW-IKKCDDDSETSNWIAANT 313
Query: 477 WRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSCPLWDEDN 528
++C KC+ IE GC HM CR C EFC+ C W+ + A +C ++ED+
Sbjct: 314 -KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDD 368
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 239 VECNRLLKWCPAPDCHHVVKVQYPDAKPVHCKCGRQFCFNCGENWHDPVKCKWLRKWIKK 298
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 299 --CDDDSETS 306
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 298 PAEISRGKTINET-------CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEK-LRQG 349
P++ SR + +N C IC + + ++ C H++C C +++ K + +G
Sbjct: 164 PSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIMEEG 222
Query: 350 MEPT--CPHEGCKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSAL 405
M T CP GC ++ + R+ K+ + + + + + +CP P C +
Sbjct: 223 MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHV 282
Query: 406 MSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTED 465
+ DA +C KC R+FC +C WH+ + C + K+ +D
Sbjct: 283 VKVQY--PDAKPV----------RC-KCGRQFCFNCGENWHDPVKCKWLKKW-IKKCDDD 328
Query: 466 VKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSC 521
+ + ++N ++C KC+ IE GC HM CR C EFC+ C W+ + A +C
Sbjct: 329 SETSNWIAANT-KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 387
Query: 522 PLWDEDN 528
++ED+
Sbjct: 388 NRYNEDD 394
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 265 VECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKK 324
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 325 --CDDDSETS 332
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 298 PAEISRGKTINET-------CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEK-LRQG 349
P++ SR + +N C IC + + ++ C H++C C +++ K + +G
Sbjct: 166 PSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIMEEG 224
Query: 350 MEPT--CPHEGCKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSAL 405
M T CP GC ++ + R+ K+ + + + + + +CP P C +
Sbjct: 225 MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHV 284
Query: 406 MSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTED 465
+ DA +C KC R+FC +C WH+ + C + K+ +D
Sbjct: 285 VKVQY--PDAKPV----------RC-KCGRQFCFNCGENWHDPVKCKWLKKW-IKKCDDD 330
Query: 466 VKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSC 521
+ + ++N ++C KC+ IE GC HM CR C EFC+ C W+ + A +C
Sbjct: 331 SETSNWIAANT-KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 389
Query: 522 PLWDEDN 528
++ED+
Sbjct: 390 NRYNEDD 396
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 267 VECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKK 326
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 327 --CDDDSETS 334
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 298 PAEISRGKTINET-------CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEK-LRQG 349
P++ SR + +N C IC + + ++ C H++C C +++ K + +G
Sbjct: 164 PSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE-CGHKFCMQCWSEYLTTKIMEEG 222
Query: 350 MEPT--CPHEGCKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSAL 405
M T CP GC ++ + R+ K+ + + + + + +CP P C +
Sbjct: 223 MGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHV 282
Query: 406 MSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTED 465
+ DA +C KC R+FC +C WH+ + C + K+ +D
Sbjct: 283 VKVQY--PDAKPV----------RC-KCGRQFCFNCGENWHDPVKCKWLKKW-IKKCDDD 328
Query: 466 VKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSC 521
+ + ++N ++C KC+ IE GC HM CR C EFC+ C W+ + A +C
Sbjct: 329 SETSNWIAANT-KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 387
Query: 522 PLWDEDN 528
++ED+
Sbjct: 388 NRYNEDD 394
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 265 VECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKK 324
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 325 --CDDDSETS 332
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP-------TCPHEGCKSK 362
+C +CL + + M +I C +C LC+K+++E +++G+E CP +G +
Sbjct: 19 SCKLCLGEFPLEQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACPKQGHLLE 78
Query: 363 LEVESCRIFLTLKLFEIWNQRMKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVG 422
E+E ++ ++ + L P + +CP C A+ +E E
Sbjct: 79 NEIECMVAGEVMQHYKRLQFEREVLLDPC--RTWCPSSSCQAVCQLNEAEVQLPQPV--- 133
Query: 423 RRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTED-VKLKSLASSNLWRQCV 481
+C +C RFC C+ H C + P E+ LKS ++C
Sbjct: 134 ------QCPECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCP 187
Query: 482 KCNHLIELAEGCFHMTCR-CGHEFCYNC 508
KC IE EGC M C+ C H FC+ C
Sbjct: 188 KCKVYIERDEGCAQMMCKNCKHAFCWYC 215
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGC--KSKLEV 365
+C +CL + + M +I C +C +C+K+++E +++G E +CP C + L+
Sbjct: 19 SCKLCLGEFPLEQMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPKRGHLQE 78
Query: 366 ESCRIFLTLKLFEIWN--QRMKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGR 423
+ ++ + + Q KE L+ + + +CP C A+ E D V
Sbjct: 79 NEIECMVATEIMQRYRKLQFEKEVLLDPS-RTWCPSSTCQAVCQLK--ESDTVLPQLV-- 133
Query: 424 RLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVK-LKSLASSNLWRQCVK 482
+C+ C FC CK WH + C + P E K+ ++C K
Sbjct: 134 -----RCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPK 188
Query: 483 CNHLIELAEGCFHMTCR-CGHEFCYNC 508
C IE EGC M C+ C H FC+ C
Sbjct: 189 CKVYIERDEGCAQMMCKNCKHAFCWYC 215
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 24/227 (10%)
Query: 298 PAEISRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTC 354
P G ++ C IC E + S+ C H YC C +I K+ G + C
Sbjct: 108 PVVDVNGTEVDIQCGICFESYTRKEIASV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKC 166
Query: 355 PHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIER 413
P C + + + K + + + + + +K+ +CP P C +
Sbjct: 167 PEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVE------ 220
Query: 414 DASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTC-IYYKRLNPNPPTEDVKLKSLA 472
G G C RFC +C H+ + C K + N + K LA
Sbjct: 221 -------FGESSGYDVACLCSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILA 273
Query: 473 SSNLWRQCVKCNHLIELAEGCFHMTC--RCGHEFCYNCGAEWKNKKA 517
+S + C KC IE + GC HMTC CGH FC+ CG + + A
Sbjct: 274 NS---KPCPKCKRPIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYA 317
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 25/238 (10%)
Query: 280 MKYVYELARAAINSQMTVPAEISRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMK 339
M L A+ ++ P +++ I TC +CL + + M ++ C +C C+K
Sbjct: 1 MGSAGRLHYLAMTAENPTPGDLAPAPLI--TCKLCLCEQSLDKMTTLQECQCIFCTACLK 58
Query: 340 KHIEEKLRQGMEP--TCPHEGCKSKLEVESCRI--FLTLKLFEIWNQRMK----EALIPV 391
++++ +R+G TCP C + ++ I + + F+++ QR+K L P
Sbjct: 59 QYMQLAIREGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLY-QRLKFEREVHLDPY 117
Query: 392 TEKVYCPYPKCSALMSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTC 451
+ +CP C + + D V +C CH +FC CK WH ++C
Sbjct: 118 --RTWCPVADCQTVCPVAS--SDPGQPVLV-------ECPSCHLKFCSCCKDAWHAEVSC 166
Query: 452 IYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR-CGHEFCYNC 508
+ + PTE L + +QC C IE EGC M C+ C H FC+ C
Sbjct: 167 RDSQPI--VLPTEHRALFGTDAEAPIKQCPVCRVYIERNEGCAQMMCKNCKHTFCWYC 222
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 17/206 (8%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGC--KSKLEV 365
+C +CL + M +I C +C LC+K+++E +++G+E +CP C + L+
Sbjct: 19 SCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 78
Query: 366 ESCRIFLTLKLFEIWN--QRMKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGR 423
+ ++ + + Q +E L + +CP C A+ +I + V
Sbjct: 79 NEIECMVAAEIMQRYKKLQFEREVLFDPC-RTWCPASTCQAVCQLQDI--GLQTPQLV-- 133
Query: 424 RLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKC 483
+C C FC CK WH C + P K ++C KC
Sbjct: 134 -----QCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKC 188
Query: 484 NHLIELAEGCFHMTCR-CGHEFCYNC 508
IE EGC M C+ C H FC+ C
Sbjct: 189 RVYIERDEGCAQMMCKNCKHAFCWYC 214
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEPTCPHEGCKSKLEVESCRI 370
C IC+E+ + + C HR+C C K+H ++ +G K + R
Sbjct: 119 CDICMEEDLSKYAMTRMECGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNTICDEARQ 178
Query: 371 FLTLKLFEIWNQRMKEALIPVTEKV-YCP-YPKCSALMSKSEIERDASSSSFVGRRLGAR 428
++ +L E +++ + E+ + V +CP P C + + + D
Sbjct: 179 LVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEV---------- 228
Query: 429 KCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNHLIE 488
+C+ C +FC C H+ +C+ +K E + + + + C KC+ I+
Sbjct: 229 ECS-CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNT--KLCPKCSKPIQ 285
Query: 489 LAEGCFHMTCRCGHEFCYNCG 509
+GC HMTC+CG FC+ CG
Sbjct: 286 KRDGCNHMTCKCGQHFCWLCG 306
>sp|Q9P2G1|AKIB1_HUMAN Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens
GN=ANKIB1 PE=1 SV=3
Length = 1089
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 22/247 (8%)
Query: 293 SQMTVPAEIS--RGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGM 350
S +T P EIS G C IC+ V C H +C C + + K+++G
Sbjct: 313 SSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEGE 372
Query: 351 EPT--CPHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMS 407
CP C + V+ ++ ++ + + Q +A + + +CP P C +
Sbjct: 373 AHNIFCPAYDCFQLVPVDIIESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTPGCDRAVR 432
Query: 408 KSEIERDASSS---SFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYK----RLNPN 460
++ + S S SF R A C K H FC +C H C +K ++
Sbjct: 433 LTKQGSNTSGSDTLSFPLLRAPAVDCGKGHL-FCWECLGEAHEPCDCQTWKNWLQKITEM 491
Query: 461 PPTEDVKLKSL---ASSNLW-----RQCVKCNHLIELAEGCFHMTC-RCGHEFCYNCGAE 511
P E V + A++ LW + C C I+ EGC HM C +C ++FC+ C E
Sbjct: 492 KPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEE 551
Query: 512 WKNKKAT 518
WK ++
Sbjct: 552 WKKHSSS 558
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 41/257 (15%)
Query: 273 RHVARNDMKYVYELA-RAAINSQMTVPAEISRGKTINETCVICLEDTDVGH-MFSIDGCL 330
+ V R +K E+ R +++++ P E C IC + D + +F+++ C
Sbjct: 587 KKVLRQYIKLKKEMEDRKKVSTKLEEPVE----------CKICYMEYDQSNEVFTLE-CD 635
Query: 331 HRYCFLCMKKHIEEKLRQG--MEPTCPHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEAL 388
H YCF C+ +H+ + +G ++ +CPH CK E++ I++ L + W + K ++
Sbjct: 636 HVYCFDCITEHLRILITEGRVLDISCPHPQCKK--EIKESEIYM-LTNEKNWLKYQKFSM 692
Query: 389 IPV--TEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPW 445
I TE + +CP P C + R S R C KC FC C
Sbjct: 693 IASLKTEPIKWCPTPDCDTPV------RGGS------ERNPILNCPKCSNDFCWICGEYS 740
Query: 446 HNNMTCI-----YYKRLNPNPPTEDVKLKSLASSN--LWRQCVKCNHLIELAEGCFHMTC 498
H C R N + + SN + C C IE +GC HMTC
Sbjct: 741 HEGAKCGTEAMELQGRKNKSIESAATAYIDFLESNKHFVKPCPTCKSHIEKHDGCNHMTC 800
Query: 499 -RCGHEFCYNCGAEWKN 514
C H+FC+ C +++
Sbjct: 801 INCQHQFCWLCMNPYQS 817
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 116/284 (40%), Gaps = 44/284 (15%)
Query: 258 DQVSLLEKRFS-----YFKPRHVARNDMKYVYELARAAINSQMTVPAEISRGKTINETCV 312
D+ LLEK F +FK HV N+ + + SR + E C
Sbjct: 89 DKEKLLEKYFDDNTDEFFKCAHVIN------------PFNATEAIKQKTSRSQC--EECE 134
Query: 313 ICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQ---GMEPTCPHEGCKSKLE-VESC 368
IC M ++ C HR+C C +++ K+ G +C GC ++ V
Sbjct: 135 ICFSQLPPDSMAGLE-CGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVTVA 193
Query: 369 RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRLGA 427
+ ++ + Q + + + + + +CP C+ + E RR+
Sbjct: 194 NLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAVKVPYAE---------PRRVHC 244
Query: 428 RKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNHLI 487
KC FC C WH+ + C + K+ +D + + ++N ++C +C+ I
Sbjct: 245 ----KCGHVFCFACGENWHDPVKCRWLKKW-IKKCDDDSETSNWIAANT-KECPRCSVTI 298
Query: 488 ELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSCPLWDED 527
E GC HM C+ C +EFC+ C W+ + + +C +DED
Sbjct: 299 EKDGGCNHMVCKNQNCKNEFCWVCLGSWEPHGSSWYNCNRYDED 342
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG-MEPTCPHEGCKSKLEVESCR 369
C +CLED + + C C C+K ++ +++ G +E CP C LE +
Sbjct: 236 CRVCLEDKPIK---PLPCCKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETTVV 292
Query: 370 IFLTLKLFEIWNQRMKEALIPVTEKVYCPYPKC---SALMSKSEIERDASSSSFVGRRLG 426
LT + + ++ I + K P P+C + K I + S S
Sbjct: 293 YNLTHEDSIKYKYFLELGRIDSSTK---PCPQCKHFTTFKKKGHIPTPSRSESRY----- 344
Query: 427 ARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLAS-----SNLWRQCV 481
+C C +C C PWH + C YK+ D L+ AS ++C
Sbjct: 345 KIQCPTCQLIWCFKCHSPWHEGVNCKEYKK-------GDKLLRHWASEIEHGQRNAQKCP 397
Query: 482 KCNHLIELAEGCFHMTC-RCGHEFCYNCGAEWKN 514
KC I+ EGC HMTC +C FCY CG ++
Sbjct: 398 KCKIHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 431
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 32/247 (12%)
Query: 298 PAEISRGKTINET-------CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKL-RQG 349
P++ SR + +N C IC + + ++ C H++C C ++ K+ +G
Sbjct: 136 PSKKSRTRLMNTRSSAQDMPCQICYLNYPNSYFTGLE-CGHKFCMQCWGDYLTTKIIEEG 194
Query: 350 MEPT--CPHEGCKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSAL 405
M T CP C ++ + R+ K+ + + + + + +CP P C +
Sbjct: 195 MGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHV 254
Query: 406 MSKSEIERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTED 465
+ DA +C KC R+FC +C WH+ + C + ++ +D
Sbjct: 255 VKVQY--PDAKPV----------RC-KCGRQFCFNCGENWHDPVKCKWLRKW-IKKCDDD 300
Query: 466 VKLKSLASSNLWRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSC 521
+ + ++N ++C KC+ IE GC HM CR C EFC+ C W+ + A +C
Sbjct: 301 SETSNWIAANT-KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNC 359
Query: 522 PLWDEDN 528
++ED+
Sbjct: 360 NRYNEDD 366
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 237 VECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKK 296
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 297 --CDDDSETS 304
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGCKSKLEVES 367
TC +CL + + M ++ C +C C+K++++ +R+G TCP C + ++
Sbjct: 30 TCKLCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQE 89
Query: 368 CRI--FLTLKLFEIWNQRMK----EALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFV 421
I + + F+++ QR+K L P + +CP C + + D V
Sbjct: 90 AEIACLVPVDQFQLY-QRLKFEREVHLDPC--RTWCPVADCQTVCPVAT--SDPGQPVLV 144
Query: 422 GRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNP-PTEDVKLKSLASSNLWRQC 480
+C CH +FC CK WH ++C + P PTE L + +QC
Sbjct: 145 -------ECPSCHLKFCSCCKDAWHAEVSC---RDSQPGILPTEHGTLFGTETDAPIKQC 194
Query: 481 VKCNHLIELAEGCFHMTCR-CGHEFCYNC 508
C IE EGC M C+ C H FC+ C
Sbjct: 195 PVCRVYIERNEGCAQMMCKNCKHTFCWYC 223
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 25/236 (10%)
Query: 302 SRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKL-RQGMEPT--CPHEG 358
+R + + C IC + + ++ C H++C C ++ K+ +GM T CP
Sbjct: 153 TRSSSQDLPCQICYLNYPNSYFTGLE-CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHN 211
Query: 359 CKSKLEVESC-RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDAS 416
C ++ + R+ K+ + + + + + +CP P C ++ DA
Sbjct: 212 CDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQY--PDAK 269
Query: 417 SSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNL 476
+C KC R+FC +C WH+ + C + ++ +D + + ++N
Sbjct: 270 PV----------RC-KCGRQFCFNCGENWHDPVKCKWLRKW-IKKCDDDSETSNWIAANT 317
Query: 477 WRQCVKCNHLIELAEGCFHMTCR---CGHEFCYNCGAEWK-NKKATCSCPLWDEDN 528
++C KC+ IE GC HM CR C EFC+ C W+ + A +C ++ED+
Sbjct: 318 -KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDD 372
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 481 VKCNHLIEL--AEGCFHMT-----------CRCGHEFCYNCGAEWKNKKATCSCPLWDED 527
V+CN L++ A C H+ C+CG +FC+NCG W + W +
Sbjct: 243 VECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKK 302
Query: 528 NILDDDSDSS 537
DDDS++S
Sbjct: 303 --CDDDSETS 310
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG-MEPTCPHEGCKSKLEVESCR 369
C +CL + + GC HR C C+++++ ++ + ++ +CP C +L
Sbjct: 107 CPLCLVRQPAEQLPELQGCSHRSCLCCLRQYLRIEITESRVQLSCPE--CAERLAPWQVA 164
Query: 370 IFLT-LKLFEIWNQ-RMKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRLGA 427
+ L L E + + ++ L + +CP P C + S AS V RR G
Sbjct: 165 LILDDPNLMEKYEEFLLRRCLASDPDCRWCPAPDCGFAVIASGC---ASCPRLVCRREG- 220
Query: 428 RKCTKCHRRFCIDCKVPWHNNMTCIYYKR-----LNPNPPTEDVKLKSLASSNLWRQCVK 482
C FC CK WH N TC ++ L + ++ + C +
Sbjct: 221 -----CGAEFCYHCKQAWHPNQTCDSARQQRALSLRTHSNHSPSYTAEQGHTDDIKPCPR 275
Query: 483 CN-HLIELAEG-CFHMTCR-CGHEFCYNC 508
C ++I++ +G C HMTC CG EFC+ C
Sbjct: 276 CGAYIIKMNDGSCNHMTCAVCGCEFCWLC 304
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 19/236 (8%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEPTCPHEGCKSKLEVESC- 368
TC+IC + D F+++ C H YC C + +I++KL +G TC C L+ E
Sbjct: 178 TCIICCDKKDT-ETFALE-CGHEYCINCYRHYIKDKLHEGNIITCM--DCSLALKNEDID 233
Query: 369 RIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRLGA 427
++ ++ + +K + +CP+ C +++ RD SS RL
Sbjct: 234 KVMGHPSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSIVHL----RDTSSLPEY-TRLHY 288
Query: 428 RKCTKCH--RRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNH 485
KC+ RFC +C H+ C E L + S ++C KC+
Sbjct: 289 SPFVKCNSFHRFCFNCGFEVHSPADCKITTAWVKKARKESEILNWVLSHT--KECPKCSV 346
Query: 486 LIELAEGCFHMTC-RCGHEFCYNCGAEWK-NKKATCSCPLW--DEDNILDDDSDSS 537
IE GC HM C C +EFC+ C W + K C ++ +EDN + D++
Sbjct: 347 NIEKNGGCNHMVCSSCKYEFCWICEGPWAPHGKNFFQCTMYKNNEDNKSKNPQDAN 402
>sp|Q6ZPS6|AKIB1_MOUSE Ankyrin repeat and IBR domain-containing protein 1 OS=Mus musculus
GN=Ankib1 PE=1 SV=2
Length = 1085
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 22/247 (8%)
Query: 293 SQMTVPAEIS--RGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGM 350
S +T P EIS G C IC+ V C H +C C + + K+++G
Sbjct: 314 SSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCWEAFLNLKIQEGE 373
Query: 351 EPT--CPHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMS 407
CP C + V+ ++ ++ + + Q +A + + +CP C +
Sbjct: 374 AHNIFCPAYECFQLVPVDVIESVVSKEMDKRYLQFDIKAFVENNPAIKWCPTAGCERAVR 433
Query: 408 KSEIERDASSS---SFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYK----RLNPN 460
++ + S S SF R A C K H FC +C H C +K ++
Sbjct: 434 LTKQGSNPSGSDTLSFPLLRAPAVDCGKGHL-FCWECLGEAHEPCDCQTWKNWLQKITEM 492
Query: 461 PPTEDVKLKSL---ASSNLW-----RQCVKCNHLIELAEGCFHMTC-RCGHEFCYNCGAE 511
P E V + A++ LW + C C I+ EGC HM C +C ++FC+ C E
Sbjct: 493 KPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEE 552
Query: 512 WKNKKAT 518
WK ++
Sbjct: 553 WKKHSSS 559
>sp|Q1L8G6|AKIB1_DANRE Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio
GN=ankib1 PE=3 SV=1
Length = 1060
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 20/245 (8%)
Query: 293 SQMTVPAEISRGKTIN--ETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGM 350
S +T P EIS + C IC+ V C H +C C + + K+++G
Sbjct: 314 SSVTSPDEISLLSPTDGLALCGICMSSISVFEDPVDMSCGHEFCRACWEGFLNLKIQEGE 373
Query: 351 EPT--CPHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMS 407
CP C + VE ++ ++ + + Q +A + + +CP +C +
Sbjct: 374 AHNIFCPAYDCFQLVPVEVIESVVSREMDKRYLQFDIKAFVDNNPAIHWCPVARCERAVR 433
Query: 408 KSEIERDASSS-SFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTC----IYYKRLNPNPP 462
+ AS SF + A C K H FC +C H C ++ ++++ P
Sbjct: 434 LTRPGPGASDPLSFPLLKAPAVDCGKGHL-FCWECLGDAHEPCDCETWKMWLQKVSEMKP 492
Query: 463 TEDVKLKSL---ASSNLW-----RQCVKCNHLIELAEGCFHMTC-RCGHEFCYNCGAEWK 513
E + A++ LW + C C I+ EGC HM C +C ++FC+ C EWK
Sbjct: 493 EELAGVSEAYEDAANCLWLLSNSKPCANCKSPIQKNEGCNHMQCAKCKYDFCWICLEEWK 552
Query: 514 NKKAT 518
++
Sbjct: 553 KHSSS 557
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 311 CVICLED--TDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEPTCPHEGCKSKLEVESC 368
C +C D T++ H+ C H +C C K H+E +L +G+ E +S+ EV +
Sbjct: 129 CSVCAMDGYTELPHL----TCGHCFCEHCWKSHVESRLSEGVASRI--ECMESECEVYAP 182
Query: 369 RIFLTLKLFEIWNQRMKEALIPVTEKV-------YCPYPKCSALMSKSEIERDASSSSFV 421
F+ + ++K + + V +C +C ++ +E++
Sbjct: 183 SEFVLSIIKNSPVIKLKYERFLLRDMVNSHPHLKFCVGNECPVIIRSTEVK--------- 233
Query: 422 GRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCV 481
+R+ C +CH FC+ C +H +C K+ +D + + S++ + C
Sbjct: 234 PKRV---TCMQCHTSFCVKCGADYHAPTSCETIKQW-MTKCADDSETANYISAHT-KDCP 288
Query: 482 KCNHLIELAEGCFHMTC-RCGHEFCYNCGAEWKN 514
+C+ IE A GC H+ C RC H FC+ C +WK+
Sbjct: 289 QCHSCIEKAGGCNHIQCTRCRHHFCWMCFGDWKS 322
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGCKSKLEVESC 368
C +C++ ++ S+ C H++C C ++H ++ G+ +C + C L
Sbjct: 139 CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCP--LRTPED 195
Query: 369 RIFLTLKLFEIWNQRMKEALIPVTEKVY----CPYPKCSALMSKSEIERDASSSSFVGRR 424
+F L E+ + + E Y CP C ++ E RR
Sbjct: 196 FVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPR---------ARR 246
Query: 425 LGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCN 484
+ +C +C+ FC C+ +H C ++ +D + + S++ + C KCN
Sbjct: 247 V---QCNRCNEVFCFKCRQMYHAPTDCATIRKW-LTKCADDSETANYISAHT-KDCPKCN 301
Query: 485 HLIELAEGCFHMTC-RCGHEFCYNCGAEWK 513
IE GC HM C +C H+FC+ C +WK
Sbjct: 302 ICIEKNGGCNHMQCSKCKHDFCWMCLGDWK 331
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGCKSKLEVES 367
TC +CL + + M + C +C C+K+++ +R+G TCP C + ++
Sbjct: 29 TCKLCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQE 88
Query: 368 CRIFLTLKL--FEIWNQRMK----EALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFV 421
I + L F+++ QR+K + P+ + +CP C + S D V
Sbjct: 89 TEIACLVPLDEFQLY-QRLKFEREVHMDPL--RTWCPVADCQTVCHISA--GDPGQPVLV 143
Query: 422 GRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCV 481
+C CH +FC CK WH +C + P E L + +QC
Sbjct: 144 -------ECPSCHLKFCSCCKDAWHEESSCRDSQSAMP----EHGALFGTDADAPIKQCP 192
Query: 482 KCNHLIELAEGCFHMTCR-CGHEFCYNC 508
C IE EGC M C+ C H FC+ C
Sbjct: 193 VCRIYIERNEGCAQMMCKNCKHTFCWYC 220
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP--TCPHEGCKSKLEVESC 368
C +C++ ++ S+ C H++C C ++H ++ G+ +C + C L
Sbjct: 138 CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCP--LRTPED 194
Query: 369 RIFLTLKLFEIWNQRMKEALIPVTEKVY----CPYPKCSALMSKSEIERDASSSSFVGRR 424
+F L E+ ++ + E + CP C ++ E RR
Sbjct: 195 FVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQEPR---------ARR 245
Query: 425 LGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCN 484
+ +C +C FC C+ +H C ++ +D + + S++ + C KCN
Sbjct: 246 V---QCNRCSEVFCFKCRQMYHAPTDCATIRKW-LTKCADDSETANYISAHT-KDCPKCN 300
Query: 485 HLIELAEGCFHMTC-RCGHEFCYNCGAEWK 513
IE GC HM C +C H+FC+ C +WK
Sbjct: 301 ICIEKNGGCNHMQCSKCKHDFCWMCLGDWK 330
>sp|Q9WVS6|PRKN2_MOUSE E3 ubiquitin-protein ligase parkin OS=Mus musculus GN=Park2 PE=1
SV=1
Length = 464
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 306 TINETCVICLEDTDVG-----------HMFSIDGCLHRYCFLCMK-KHIEEKLRQGMEPT 353
T N + C+ TDV H+ +D C H YC + + + G
Sbjct: 229 TSNRRSIPCIACTDVRSPVLVFQCNHRHVICLD-CFHLYCVTRLNDRQFVHDAQLGYSLP 287
Query: 354 CPHEGCKSKL--EVESCRIFLTLKLFEIWNQRMKEALIPVTEKVYCPYPKCSALMSKSEI 411
C GC + L E+ RI L + + + Q E + V CP P C A + +
Sbjct: 288 CV-AGCPNSLIKELHHFRI-LGEEQYTRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEQG 345
Query: 412 ERDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWH----------NNMTCIYY---KRLN 458
+R + G LG C FC DCK +H + T Y KR
Sbjct: 346 QRKVTCEG--GNGLG------CGFVFCRDCKEAYHEGDCDSLLEPSGATSQAYRVDKRAA 397
Query: 459 PNPPTEDVKLKSLASSNLWRQCVKCNHLIELAEGCFHMTC---RCGHEFCYNCGAEW 512
E+ +++ + + C +CN IE GC HM C +C E+C+NCG EW
Sbjct: 398 EQARWEEASKETIKKTT--KPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEW 452
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGM-EPTCPHEGCKSKLEVESC 368
+C +CLED + + C C C+K+++ +++ G E CP C L+ +
Sbjct: 2 SCRVCLEDRSIK---PLPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDEST- 57
Query: 369 RIFLTLKLFEIWNQRMKEALIPVTEKVYCPYPKC---SALMSKSEIERDASSSSFVGRRL 425
I +L +I + L + P P+C + K+ I S + +
Sbjct: 58 -ILYSLPHDDIIKYKYFLELSRMDSSTK-PCPQCKHFTTFKRKTHIPNPTKSENKL---- 111
Query: 426 GARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLAS-----SNLWRQC 480
+C C +C C PWH + C YK+ D L+ A+ ++C
Sbjct: 112 -KIQCPSCQFIWCFRCHAPWHEGVNCREYKK-------GDKLLRHWANEIEHGQRNAQKC 163
Query: 481 VKCNHLIELAEGCFHMTC-RCGHEFCYNCGAEWKN 514
+C I+ EGC HMTC +C FCY CG ++
Sbjct: 164 PRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 198
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP-TCPHEGCKSKLEVESCR 369
C +CL + C HR C C++ ++ ++ + P +CP C +L R
Sbjct: 119 CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVPISCPE--CSERLNPHDIR 176
Query: 370 IFLT-LKLFEIWNQRM-KEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRLGA 427
+ L L + + M + L + +CP P C + AS R G
Sbjct: 177 LLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGC---ASCPKLTCEREG- 232
Query: 428 RKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNL----------- 476
C FC CK WH N TC ++ + +++++ +S L
Sbjct: 233 -----CQTEFCYHCKQIWHPNQTCDMARQQR----AQTLRVRTKHTSGLSYGQESGPADD 283
Query: 477 WRQCVKCN-HLIELAEG-CFHMTCR-CGHEFCYNC 508
+ C +C+ ++I++ +G C HMTC CG EFC+ C
Sbjct: 284 IKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLC 318
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGMEP-TCPHEGCKSKLEVESCR 369
C +CL + C HR C C++ ++ ++ + P +CP C +L R
Sbjct: 116 CPLCLVRLPPERAPRLLSCPHRSCRDCLRHYLRLEISESRVPISCPE--CSERLNPHDIR 173
Query: 370 IFLT-LKLFEIWNQRM-KEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRLGA 427
+ L L + + M + L + +CP P C + AS R G
Sbjct: 174 LLLADPPLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGC---ASCPKLTCEREG- 229
Query: 428 RKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNL----------- 476
C FC CK WH N TC ++ + +++++ +S L
Sbjct: 230 -----CQTEFCYHCKQIWHPNQTCDMARQQR----AQTLRVRTKHTSGLSYGQESGPADD 280
Query: 477 WRQCVKCN-HLIELAEG-CFHMTCR-CGHEFCYNC 508
+ C +C+ ++I++ +G C HMTC CG EFC+ C
Sbjct: 281 IKPCPRCSAYIIKMNDGSCNHMTCAVCGCEFCWLC 315
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTCPHEGCKSKLEVE 366
TC IC + + + S+ C H +C C +I + G + CP C + + +
Sbjct: 131 TCGICFDSYTLEEIVSV-SCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRD 189
Query: 367 SCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRL 425
+ + E + + + + V ++ +CP P C + F G
Sbjct: 190 MIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAID------------FAGGTE 237
Query: 426 GARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNH 485
C FC +C H + C + E + + +++ + C KC
Sbjct: 238 SYDVSCLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANS--KPCPKCKR 295
Query: 486 LIELAEGCFHMTCR--CGHEFCYNCGAEW 512
IE GC HMTC C EFC+ C W
Sbjct: 296 PIEKNHGCMHMTCTPPCKFEFCWLCLNAW 324
>sp|Q9JK66|PRKN2_RAT E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus GN=Park2
PE=1 SV=1
Length = 465
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 94/236 (39%), Gaps = 41/236 (17%)
Query: 306 TINETCVICLEDTDVGHMFSIDGCLHRY--CFLCMKKHIEEKL--RQ-------GMEPTC 354
T N + C+ TDV + + C HR+ C C + +L RQ G C
Sbjct: 230 TNNSRSIPCIACTDVRNPVLVFQCNHRHVICLDCFHLYCVTRLNDRQFVHDAQLGYSLPC 289
Query: 355 PHEGCKSKL--EVESCRIFLTLKLFEIWNQRMKEALIPVTEKVYCPYPKCSALMSKSEIE 412
GC + L E+ RI L + + + Q E + V CP P C A + + +
Sbjct: 290 V-AGCPNSLIKELHHFRI-LGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEQGQ 347
Query: 413 RDASSSSFVGRRLGARKCTKCHRRFCIDCKVPWH----------NNMTCIYYK---RLNP 459
+ + G LG C FC DCK +H + T Y+ R
Sbjct: 348 KKVTCEG--GNGLG------CGFVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAE 399
Query: 460 NPPTEDVKLKSLASSNLWRQCVKCNHLIELAEGCFHMTC---RCGHEFCYNCGAEW 512
E+ +++ + + C +CN IE GC HM C +C E+C+NCG EW
Sbjct: 400 QARWEEASKETIKKTT--KPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEW 453
>sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana
GN=ARI7 PE=2 SV=1
Length = 562
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 77/209 (36%), Gaps = 21/209 (10%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTCPHEGCKSKLEVE 366
TC IC + + S+ C H +C C +I + G + CP C + + +
Sbjct: 136 TCGICFDSYPPEKIASV-SCGHPFCTTCWTGYISTTINDGPGCLMLRCPDPSCLAAVGHD 194
Query: 367 SCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRL 425
+ E +N+ + I K+ +CP P C + FV
Sbjct: 195 MVDKLASEDEKEKYNRYFLRSYIEDNRKMKWCPAPGCDFAID------------FVAGSG 242
Query: 426 GARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNH 485
C FC +C H + C + E + + +++ + C +C
Sbjct: 243 NYDVSCLCSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWILANS--KPCPRCKR 300
Query: 486 LIELAEGCFHMTCR--CGHEFCYNCGAEW 512
IE +GC HMTC C +EFC+ C W
Sbjct: 301 PIEKNQGCMHMTCTPPCKYEFCWLCLGAW 329
>sp|Q9US46|ITT1_SCHPO E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=itt1 PE=4 SV=1
Length = 435
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 63/244 (25%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQGM--EPTCPHEGCKSKLEVESC 368
C +C ++ + F + C H C C++ + +++GM + C C V
Sbjct: 174 CNVCFDEFNGTDCFQLTRCGHVSCQSCLRDYYTMCIQEGMFSQIKCIDLDCGKDAPV--- 230
Query: 369 RIFLTLKLFE-IWNQRMKEALIPVTEK---------VYCPYPKCSALMSKSEIERDASSS 418
LTLK E I ++ + EK ++CP C + +RD
Sbjct: 231 ---LTLKELESIVGVQLTNRYKELEEKRRYENDSNIIFCPRSFC-----QGPSKRDP--- 279
Query: 419 SFVGRRLGARKCTKCHRRFCIDCKVPWHNNMT-----------CIYYKRLNPNPPTEDVK 467
G++L C KC FC C+ WH +++ Y N P + ++
Sbjct: 280 ---GQKLAI--CQKCDFAFCSFCQATWHGDLSPCKLEGDSKKLVEMYLNYQENEPEKALE 334
Query: 468 LKSLASSNL----------------W-----RQCVKCNHLIELAEGCFHMTCRCGHEFCY 506
L+ + W ++C C+ ++E +GC HM C CG FC+
Sbjct: 335 LEKRYGKRIIDRLVEQVKNDEEAEKWVLLNGQRCPTCDRVVERIDGCCHMNCLCGTHFCF 394
Query: 507 NCGA 510
CGA
Sbjct: 395 LCGA 398
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 80/212 (37%), Gaps = 26/212 (12%)
Query: 310 TCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTCPHEGCKSKLEVE 366
TC IC E + S+ C H +C C +I + G + CP+ C + + +
Sbjct: 132 TCGICFESYPLEETISVS-CGHPFCATCWTGYISTSINDGPGCLMLKCPYPCCPAAIGRD 190
Query: 367 SCRIFLTLKLFEIWNQRMKEALIPVTEKVYC-PYPKCSALMS---KSEIERDASSSSFVG 422
+ + E + + + + V ++ C P P C +S +E D S
Sbjct: 191 MIDNLCSKEDKERYYRYFLRSYVEVNREMKCCPAPGCEHAISFAAGTESNYDVS------ 244
Query: 423 RRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVK 482
C FC +C H + C + TE + + +++ + C K
Sbjct: 245 --------CLCSHSFCWNCSEEAHRPVDCDTVGKWILKNSTESENMNWILANS--KPCPK 294
Query: 483 CNHLIELAEGCFHMTCR--CGHEFCYNCGAEW 512
C IE GC HMTC C EFC+ C W
Sbjct: 295 CKRPIEKNHGCMHMTCTPPCKFEFCWLCLNAW 326
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 57/285 (20%)
Query: 249 KQRKISVLVDQVSLLEKRFSYFKPRHVARNDMKYVYELARAAINSQMTVPAEISRGKTIN 308
K R+++ VD ++ +E S D ++ ++ N ++ +I G I
Sbjct: 80 KSRELNGGVDGIASIESIHSEMCA------DKNSIFSTNTSSDNGLTSISKQI--GDFIE 131
Query: 309 ETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG-MEPTCPHEGCKSKLEVES 367
C +CL I C HR C C+++++ ++ + + +CP C +
Sbjct: 132 --CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPE--CTERFNPHD 187
Query: 368 CRIFLTLK-LFEIWNQRM-KEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRL 425
R+ L+ L E + + M + L+ + +CP P C +
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCG----------------YAVIAF 231
Query: 426 GARKCTK-------CHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSL------- 471
G C K C FC CK WH N TC ++ + ++L+++
Sbjct: 232 GCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQER----AQSLRLRTIRSSSISY 287
Query: 472 -----ASSNLWRQCVKC-NHLIELAEG-CFHMTCR-CGHEFCYNC 508
A+++ + C +C ++I++ +G C HMTC CG EFC+ C
Sbjct: 288 SQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLC 332
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 429 KCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLAS-----SNLWRQCVKC 483
+C C +C C PWH + C YK+ D L+ AS ++C KC
Sbjct: 82 QCPTCQFVWCFKCHSPWHEGVNCKEYKK-------GDKLLRHWASEIEHGQRNAQKCPKC 134
Query: 484 NHLIELAEGCFHMTC-RCGHEFCYNCGAEWKN 514
I+ EGC HMTC +C FCY CG ++
Sbjct: 135 KIHIQRTEGCDHMTCSQCNTNFCYRCGERYRQ 166
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 122/305 (40%), Gaps = 59/305 (19%)
Query: 249 KQRKISVLVDQVSLLEKRFSYFKPRHVARNDMKYVYELARAAINSQMTVPAEISRGKTIN 308
K R+++ VD ++ +E S D ++ ++ N ++ +I G I
Sbjct: 80 KSRELNGGVDGIASIESIHSEMC------TDKNSIFSTNTSSDNGLTSISKQI--GDFIE 131
Query: 309 ETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG-MEPTCPHEGCKSKLEVES 367
C +CL I C HR C C+++++ ++ + + +CP C +
Sbjct: 132 --CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCPE--CTERFNPHD 187
Query: 368 CRIFLTLK-LFEIWNQRM-KEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRL 425
R+ L+ L E + + M + L+ + +CP P C +
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCG----------------YAVIAF 231
Query: 426 GARKCTK-------CHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSL------- 471
G C K C FC CK WH N TC ++ + ++L+++
Sbjct: 232 GCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQ----ERAQSLRLRTIRSSSISY 287
Query: 472 -----ASSNLWRQCVKC-NHLIELAEG-CFHMTCR-CGHEFCYNCGAEWKNKK--ATCSC 521
A+++ + C +C ++I++ +G C HMTC CG EFC+ C E + + C
Sbjct: 288 SQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGC 347
Query: 522 PLWDE 526
W +
Sbjct: 348 TFWGK 352
>sp|Q08B84|RN19B_XENLA E3 ubiquitin-protein ligase RNF19B OS=Xenopus laevis GN=rnf19b PE=2
SV=2
Length = 687
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIE-EKLRQGMEPTCPHEGCKSKLEVESCR 369
C +CL + + C HR C C+++++ E + CP C +L + R
Sbjct: 95 CPLCLVRQPPEEIPELLSCRHRSCLRCLRQYLRIEICESRVNLRCPE--CAERLSPQHVR 152
Query: 370 IFLTLKLFEIWNQR--MKEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRLGA 427
L L + ++ L + +CP P C + AS R G
Sbjct: 153 AILRDPLLTRKYEEFLLRRCLAADPDCRWCPAPDCGYAVIAYGC---ASCPKLTCEREG- 208
Query: 428 RKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLK---------SLASSNLWR 478
C FC CK WH N TC ++ P+ V+ K S++ +
Sbjct: 209 -----CRTEFCYHCKHVWHPNQTCDMARQQ--RAPSLGVRRKHPSGISYGQESGSADDMK 261
Query: 479 QCVKCN-HLIELAEG-CFHMTCR-CGHEFCYNCGAE 511
C +C+ ++I++ +G C HMTC CG EFC+ C E
Sbjct: 262 SCPRCSAYIIKMNDGSCNHMTCSVCGCEFCWLCMKE 297
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 122/305 (40%), Gaps = 59/305 (19%)
Query: 249 KQRKISVLVDQVSLLEKRFSYFKPRHVARNDMKYVYELARAAINSQMTVPAEISRGKTIN 308
K R+++ VD ++ +E S D ++ ++ N ++ +I G I
Sbjct: 80 KSRELNGGVDGIASIESIHSEMC------TDKNSIFSTNTSSDNGLTSISKQI--GDFIE 131
Query: 309 ETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG-MEPTCPHEGCKSKLEVES 367
C +CL I C HR C C+++++ ++ + + +CP C +
Sbjct: 132 --CPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCPE--CTERFNPHD 187
Query: 368 CRIFLTLK-LFEIWNQRM-KEALIPVTEKVYCPYPKCSALMSKSEIERDASSSSFVGRRL 425
R+ L+ L E + + M + L+ + +CP P C +
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCG----------------YAVIAF 231
Query: 426 GARKCTK-------CHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSL------- 471
G C K C FC CK WH N TC ++ + ++L+++
Sbjct: 232 GCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQ----ERAQSLRLRTIRSSSISY 287
Query: 472 -----ASSNLWRQCVKC-NHLIELAEG-CFHMTCR-CGHEFCYNCGAEWKNKK--ATCSC 521
A+++ + C +C ++I++ +G C HMTC CG EFC+ C E + + C
Sbjct: 288 SQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGC 347
Query: 522 PLWDE 526
W +
Sbjct: 348 TFWGK 352
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 78/208 (37%), Gaps = 21/208 (10%)
Query: 311 CVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTCPHEGCKSKLEVES 367
C IC E T + C H +C C + +I + G + CP C++ + +
Sbjct: 128 CGICFE-TFLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVGQDM 186
Query: 368 CRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIERDASSSSFVGRRLG 426
+ K + + + + K +CP P C D + + VG
Sbjct: 187 INLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGC-----------DYAVNFVVGSGNY 235
Query: 427 ARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLASSNLWRQCVKCNHL 486
C C+ FC +C H + C + E + + +++ + C KC
Sbjct: 236 DVNCRCCYS-FCWNCAEEAHRPVDCDTVSKWVLKNSAESENMNWILANS--KPCPKCKRP 292
Query: 487 IELAEGCFHMTCR--CGHEFCYNCGAEW 512
IE +GC H+TC C EFC+ C W
Sbjct: 293 IEKNQGCMHITCTPPCKFEFCWLCLGAW 320
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 98/268 (36%), Gaps = 33/268 (12%)
Query: 298 PAEISRGKTINETCVICLEDTDVGHMFSIDGCLHRYCFLCMKKHIEEKLRQG---MEPTC 354
P G ++ C IC E + + C H YC C +I K+ G + C
Sbjct: 126 PVVDVNGTEVDIQCGICFESYTRKEIARV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKC 184
Query: 355 PHEGCKSKLEVESCRIFLTLKLFEIWNQRMKEALIPVTEKV-YCPYPKCSALMSKSEIER 413
P C + + + K + + + + + +K+ +CP P C + E
Sbjct: 185 PEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAV---EFGV 241
Query: 414 DASSSSFVGRRLGARKCTKCHRRFCIDCKVPWHNNMTCIYYKRLNPNPPTEDVKLKSLAS 473
+ SSS V C +FC +C H+ + C + E + + +
Sbjct: 242 NGSSSYDVS--------CLCSYKFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILA 293
Query: 474 SNLWRQCVKCNHLIELAEGCFHMTCR--CGHEFCYNCGAEWKNKKATCSCPLWDEDNILD 531
+ C KC IE GC HM+C C H FC+ C + KA C + DN
Sbjct: 294 KT--KPCPKCKRPIEKNTGCNHMSCSAPCRHYFCWACLQPLSDHKA---CNAFKADN--- 345
Query: 532 DDSDSSFEEEEEEDDDDDVIDEYESEFE 559
E+E + D ID Y +E
Sbjct: 346 -------EDETKRKRAKDAIDRYTHFYE 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,809,915
Number of Sequences: 539616
Number of extensions: 8769764
Number of successful extensions: 93189
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 232
Number of HSP's that attempted gapping in prelim test: 78950
Number of HSP's gapped (non-prelim): 10569
length of query: 565
length of database: 191,569,459
effective HSP length: 123
effective length of query: 442
effective length of database: 125,196,691
effective search space: 55336937422
effective search space used: 55336937422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)