BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008442
(565 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255573806|ref|XP_002527822.1| Squamous cell carcinoma antigen recognized by T-cells, putative
[Ricinus communis]
gi|223532746|gb|EEF34525.1| Squamous cell carcinoma antigen recognized by T-cells, putative
[Ricinus communis]
Length = 852
Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/567 (68%), Positives = 461/567 (81%), Gaps = 8/567 (1%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M N RA EEQI +QD+S+ EKFQ +M YL +E+++GDP RVQ+LYERAIT+FPVSSD+W
Sbjct: 289 MYNTRAQHEEQIYKQDISEQEKFQNFMNYLNFEKTAGDPARVQVLYERAITEFPVSSDIW 348
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYT YLDKTLKVGN+V+D Y RAT+NC WVGELWVR LLSLERSRA E+EISTVFE+SL
Sbjct: 349 LDYTCYLDKTLKVGNIVKDAYFRATRNCSWVGELWVRYLLSLERSRAHEKEISTVFEESL 408
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FST EEYLDLFLTR+DGLRRRILF E EGVL+YSLI+ET Q ASDYLS Q+KNT+G
Sbjct: 409 QCLFSTAEEYLDLFLTRVDGLRRRILFGSEAEGVLNYSLIKETMQHASDYLSPQLKNTEG 468
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LLRL+AYWA LE ++GKD+V+ARGVWE LLKISG+MLE WQ YI+ME EL HINEARSIY
Sbjct: 469 LLRLHAYWARLELNLGKDLVAARGVWESLLKISGSMLEVWQGYITMETELGHINEARSIY 528
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRFTGTGSEDICH+WLRFERE+G LEDFDH+VQKVTPRLEEL+L+R QQESK+
Sbjct: 529 KRCYSKRFTGTGSEDICHSWLRFEREFGALEDFDHAVQKVTPRLEELQLYRMQQESKAFV 588
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
SADQKE+ +K+ REKRK + EQSPAKR+K PQ +K ++K K Q QNLAE +
Sbjct: 589 ASADQKENPIKRNVREKRKGGPEYTDEQSPAKRKKQTPQ-TQKGYEKSKDQPQNLAEVTK 647
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
+ ++T +Q K+Q KD GR KG+TD+CTAFLSN++LKA YEDLR+FFSDVGGV S
Sbjct: 648 PK-VEKTDSKQEKQQ--KDYDSGRNKGYTDQCTAFLSNLHLKANYEDLRKFFSDVGGVVS 704
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRK----DSS 476
IRIL DK+TGKSRGLAYVDF DDEHLAAA+AKNKQM LGK+LSIARSNPKQ K D S
Sbjct: 705 IRILLDKYTGKSRGLAYVDFSDDEHLAAAIAKNKQMLLGKRLSIARSNPKQNKKGGRDFS 764
Query: 477 GERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGF 536
++ T+Q+ ++++ + ++ + + S +R D++QLKGKNTF VPRNV+PLG+
Sbjct: 765 KQQTHTDQSAKNEESASYMSTETSKGSRAPQSANRKLDDNIQLKGKNTFLVPRNVKPLGW 824
Query: 537 PAIKPKTEEGEDLKPKSNDEFRKMFIK 563
A KPKT E D KPKSNDEFRKMFIK
Sbjct: 825 DANKPKTVEEGDEKPKSNDEFRKMFIK 851
>gi|297739447|emb|CBI29629.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/568 (65%), Positives = 442/568 (77%), Gaps = 17/568 (2%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M +ARAHLEEQI RQD+SDSE+ QQ++ YL +EQSSGDP RVQ+LYERAIT+FPVS DLW
Sbjct: 263 MYDARAHLEEQIVRQDISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLW 322
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYTQYLDKTLKV NVVRDVYSRA KNCPWVGELWV+ LLSLER+RASE EISTVF+KSL
Sbjct: 323 LDYTQYLDKTLKVANVVRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTVFDKSL 382
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FS F EYL+LFLTR+DGLRRRI G+ E VL+Y+LIR+ FQ ASDYLS +K TD
Sbjct: 383 QCTFSRFGEYLNLFLTRVDGLRRRISLPGQ-EEVLEYALIRDAFQYASDYLSPHLKCTDD 441
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
L+RL+AYWA LE ++ KD+V+ARGVWE LLK SG+M AWQ YI+ME+E HINEARSIY
Sbjct: 442 LVRLHAYWARLELNLNKDLVAARGVWESLLKNSGSMFGAWQGYIAMELEAGHINEARSIY 501
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRF GTGSEDICH+WLRFERE+GTLED +H+V+KVTPRL EL+LF+ QESKS
Sbjct: 502 KRCYSKRFAGTGSEDICHSWLRFEREFGTLEDLEHAVRKVTPRLAELQLFK-LQESKSTA 560
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
S DQ E+ KK REKRKS S+ + EQ PAKRQK Q PKKV K + +++N+ NE
Sbjct: 561 ASTDQIENPHKKNAREKRKSTSSRTDEQPPAKRQKDTAQNPKKVDGKGRIELENVVASNE 620
Query: 361 GRETKQTVEEQP---KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
+E K +++P K+ +K + K + D+CTAF+SN++L+A YE LR FFSDVGG
Sbjct: 621 EQELKAK-DDKPDDMNKRQMKGPSHEKNK-YLDQCTAFISNLDLEANYEHLRDFFSDVGG 678
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
V++IRIL DKFTGKSRGLAYVDF DD HLAAAVAKNK+M GK+LSIARS+PKQ+ +G
Sbjct: 679 VTAIRILKDKFTGKSRGLAYVDFSDDAHLAAAVAKNKKMLRGKRLSIARSDPKQKGKGAG 738
Query: 478 ERAPTEQAQSHQQTGNAGTSASKESS-IETSKQSRG-RGDSVQLKGKNTFAVPRNVRPLG 535
S+ QTG G S SKES I +SK + R D+ QLKG+NTFAVPRNVRPLG
Sbjct: 739 --------HSNDQTGTVGESDSKESGQISSSKAPQARRDDNFQLKGRNTFAVPRNVRPLG 790
Query: 536 FPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
+ K KTEE D PKSNDEFRKM +K
Sbjct: 791 WIDKKKKTEEETDEMPKSNDEFRKMLLK 818
>gi|359486200|ref|XP_002268805.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Vitis vinifera]
Length = 838
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/579 (64%), Positives = 445/579 (76%), Gaps = 20/579 (3%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M +ARAHLEEQI RQD+SDSE+ QQ++ YL +EQSSGDP RVQ+LYERAIT+FPVS DLW
Sbjct: 263 MYDARAHLEEQIVRQDISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLW 322
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYTQYLDKTLKV NVVRDVYSRA KNCPWVGELWV+ LLSLER+RASE EISTVF+KSL
Sbjct: 323 LDYTQYLDKTLKVANVVRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTVFDKSL 382
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FS F EYL+LFLTR+DGLRRRI G+ E VL+Y+LIR+ FQ ASDYLS +K TD
Sbjct: 383 QCTFSRFGEYLNLFLTRVDGLRRRISLPGQ-EEVLEYALIRDAFQYASDYLSPHLKCTDD 441
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
L+RL+AYWA LE ++ KD+V+ARGVWE LLK SG+M AWQ YI+ME+E HINEARSIY
Sbjct: 442 LVRLHAYWARLELNLNKDLVAARGVWESLLKNSGSMFGAWQGYIAMELEAGHINEARSIY 501
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRF GTGSEDICH+WLRFERE+GTLED +H+V+KVTPRL EL+LF+ QESKS
Sbjct: 502 KRCYSKRFAGTGSEDICHSWLRFEREFGTLEDLEHAVRKVTPRLAELQLFK-LQESKSTA 560
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
S DQ E+ KK REKRKS S+ + EQ PAKRQK Q PKKV K + +++N+ NE
Sbjct: 561 ASTDQIENPHKKNAREKRKSTSSRTDEQPPAKRQKDTAQNPKKVDGKGRIELENVVASNE 620
Query: 361 GRETKQTVEEQP---KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
+E K +++P K+ +K + K + D+CTAF+SN++L+A YE LR FFSDVGG
Sbjct: 621 EQELKAK-DDKPDDMNKRQMKGPSHEKNK-YLDQCTAFISNLDLEANYEHLRDFFSDVGG 678
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ--RKDS 475
V++IRIL DKFTGKSRGLAYVDF DD HLAAAVAKNK+M GK+LSIARS+PKQ +K S
Sbjct: 679 VTAIRILKDKFTGKSRGLAYVDFSDDAHLAAAVAKNKKMLRGKRLSIARSDPKQKGKKGS 738
Query: 476 SGERAPTEQ---------AQSHQQTGNAGTSASKESS-IETSKQSRG-RGDSVQLKGKNT 524
+ T Q S+ QTG G S SKES I +SK + R D+ QLKG+NT
Sbjct: 739 AYRSNHTRQVMITGSKGAGHSNDQTGTVGESDSKESGQISSSKAPQARRDDNFQLKGRNT 798
Query: 525 FAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
FAVPRNVRPLG+ K KTEE D PKSNDEFRKM +K
Sbjct: 799 FAVPRNVRPLGWIDKKKKTEEETDEMPKSNDEFRKMLLK 837
>gi|356541840|ref|XP_003539380.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Glycine max]
Length = 837
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/574 (61%), Positives = 442/574 (77%), Gaps = 22/574 (3%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M NAR HLEEQI ++SDSE+ Q YM YLK+EQSSG P R+Q+LYERAITDFP++ DLW
Sbjct: 275 MYNARFHLEEQILSPNISDSERLQHYMNYLKFEQSSGMPARIQVLYERAITDFPITPDLW 334
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LD T+ LD TLKVGN+V +VYSRATKNCPWVGELWVR +LSLER ASE+++S +FEKSL
Sbjct: 335 LDCTRNLDNTLKVGNIVSNVYSRATKNCPWVGELWVRYMLSLERGHASEKDLSEIFEKSL 394
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
LC FST +EYLDLFLTR+DGLRRR+ S E + L+Y +IRETFQRASDYLS +KNT+G
Sbjct: 395 LCTFSTLDEYLDLFLTRVDGLRRRMASSSEED--LEYKIIRETFQRASDYLSPYLKNTEG 452
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+AYWA LE +GKD+ +ARGVWE LK+ G+MLE+W YI+ME+EL HINEARSIY
Sbjct: 453 LLHLHAYWARLETKLGKDITAARGVWENCLKLCGSMLESWTGYIAMEVELGHINEARSIY 512
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRF+GTGSEDIC +WLRFERE+G LEDFDH++ KVTPR++EL+LFR QQESK
Sbjct: 513 KRCYSKRFSGTGSEDICQSWLRFEREFGKLEDFDHALHKVTPRMDELKLFRMQQESK--- 569
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEEN- 359
SA++ E + K+ REKRK S+I+ EQSP+KR + PKK ++ K VQN+++
Sbjct: 570 -SAEESEKNTKRNAREKRKLGSDITEEQSPSKRFRDVGN-PKKAPEENKYHVQNISQVTK 627
Query: 360 -EGRETKQT-VEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
EG K T +++ P +Q + +G++D+CTAFLSN++ A YE +R FFSDVGG
Sbjct: 628 VEGVNWKNTKIDDNPSEQQFSHE---KNRGYSDQCTAFLSNLHPTANYEHIRNFFSDVGG 684
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ-RKDSS 476
+ +IRILHDKFTGKSRGLAYVDF+D+EHLAAA+AKN+ +GKKLSIARS+PK+ ++SS
Sbjct: 685 IVAIRILHDKFTGKSRGLAYVDFLDEEHLAAAIAKNRLKLIGKKLSIARSDPKRGGRESS 744
Query: 477 GERAPTEQA-----QSHQQTGNAGTSASKESSIETSK-QSRGRG-DSVQLKGKNTFAVPR 529
+ TE A S + +G+ T + + ++ K SR G D++QLKGKNTFAVPR
Sbjct: 745 NPKTLTEHADATNHSSQKASGSKETDDTYKGDVKDVKFSSRKPGNDNIQLKGKNTFAVPR 804
Query: 530 NVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
NVRPLGF KPK EEG D KPKSN+EFRK+FI+
Sbjct: 805 NVRPLGFTTNKPKAEEG-DEKPKSNEEFRKIFIR 837
>gi|356560763|ref|XP_003548657.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Glycine max]
Length = 847
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/574 (60%), Positives = 436/574 (75%), Gaps = 22/574 (3%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M NAR HLEEQI ++SDSE+ Q YM YLK+EQSSG P R+Q+LYERAITDFP++ DLW
Sbjct: 285 MYNARFHLEEQILSPNVSDSERLQHYMNYLKFEQSSGTPARIQVLYERAITDFPITPDLW 344
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYT LD TLKVGN+V +VYSRATKNCPWVGELWVR +LSLER ASE+++S +FEKSL
Sbjct: 345 LDYTCNLDNTLKVGNIVNNVYSRATKNCPWVGELWVRCMLSLERGHASEKDLSEIFEKSL 404
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FST +EYLDLFLTR+DGLRRR+ S E + L+Y +IRETFQRASDYLS +KNT+G
Sbjct: 405 QCTFSTLDEYLDLFLTRVDGLRRRMASSNEED--LEYKIIRETFQRASDYLSPYLKNTEG 462
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+AYWA LE +GKD+ +ARGVWE LKI G+MLE+W YI+ME+EL HINEARSIY
Sbjct: 463 LLHLHAYWARLETKLGKDITAARGVWENCLKICGSMLESWTGYIAMEVELGHINEARSIY 522
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRF+GTGSEDIC +WLRFERE+G LEDFDH++ KVTPRLEEL+LFR QQESK
Sbjct: 523 KRCYSKRFSGTGSEDICQSWLRFEREFGKLEDFDHALHKVTPRLEELKLFRIQQESK--- 579
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEEN- 359
+A++ E + K+ REKRK S+I+ EQ P KR + PKK ++ K Q+QN ++
Sbjct: 580 -TAEESEKNPKRNAREKRKLGSDITEEQYPTKRFRDVGN-PKKAPEENKYQLQNTSQVTK 637
Query: 360 -EGRETKQT-VEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
EG K T +++ P +Q + + ++D+CT F+SN++ A YE +R FF D GG
Sbjct: 638 VEGANWKNTKIDDNPSEQQFNHE---KNRAYSDQCTVFISNLHPTANYEHIRNFFGDDGG 694
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ-RKDSS 476
+ +IRILHDKFTGKSRGLAYVDF+D+EHLAAA+AKN+Q +GKKLSIARS+PK+ K+SS
Sbjct: 695 IVAIRILHDKFTGKSRGLAYVDFLDEEHLAAAIAKNRQKLIGKKLSIARSDPKRGGKESS 754
Query: 477 GERAPTEQAQSHQQTGNAG-----TSASKESSIETSK-QSRGRG-DSVQLKGKNTFAVPR 529
+ TE A++ + G T + + ++ +K SR G D++QLKGKNTFAVPR
Sbjct: 755 NPKTWTEHARATNHSSQKGFVSKETDDTHKGDVKDAKFSSRKPGNDNIQLKGKNTFAVPR 814
Query: 530 NVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
NV+PLGF A K K EEG D KPKSN+EFRKMFI+
Sbjct: 815 NVKPLGFTANKLKAEEG-DEKPKSNEEFRKMFIR 847
>gi|449450119|ref|XP_004142811.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Cucumis sativus]
Length = 800
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/563 (60%), Positives = 428/563 (76%), Gaps = 15/563 (2%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M NAR LE+QIS+QDL+D+E+ QY+IYLK+EQS+GDP RVQ+L+ERAI DFPVS DLW
Sbjct: 252 MYNARVQLEDQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLFERAIADFPVSVDLW 311
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYT Y+DKTLKVGN+VR+VYSRAT+NCPW+G+LWVR LL+LERS ASE EI++VF KSL
Sbjct: 312 LDYTCYMDKTLKVGNIVRNVYSRATRNCPWIGDLWVRYLLALERSHASEGEIASVFGKSL 371
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C+FST +EYLDLFLTRIDGLRRRI ++E L+YSLIRETFQRASDYLS +KN++
Sbjct: 372 QCSFSTLDEYLDLFLTRIDGLRRRISSGVQLEDALEYSLIRETFQRASDYLSPHLKNSEV 431
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
L+RLYAYWA LE +MGK++ SARGVWE LLKI G++ AW+ YI+ME+EL+HIN ARSIY
Sbjct: 432 LVRLYAYWARLEINMGKNLDSARGVWESLLKICGSLSAAWEGYIAMEVELNHINNARSIY 491
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRF G+GSEDICH+WLRFERE+G+LEDFDH+V+KV PRLEEL+ ++ Q
Sbjct: 492 KRCYSKRFPGSGSEDICHSWLRFEREFGSLEDFDHAVRKVNPRLEELKSYKLQ------- 544
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
D E+ VK+ R KRK + +SPAK+ K + PKKV +K K Q++N+ ++
Sbjct: 545 --IDDSENPVKQNDRSKRKLGGDAPNVESPAKKLKDSAHGPKKVTEKGKAQLENVDDQTG 602
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
+ + Q + D++ + K + D+CTAF+SN+NLK TY+ LR FF DVGGV +
Sbjct: 603 DIRGRVKKLDDISDQQMNDSIQEKGKVYNDQCTAFISNLNLKVTYDHLRDFFQDVGGVVA 662
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
IRILHDKFTGKSRGLAYVDF DD HL A VAKNKQ+ LGKK+SIARS+PK K G
Sbjct: 663 IRILHDKFTGKSRGLAYVDFSDDAHLEAGVAKNKQLLLGKKISIARSDPK--KGGHG--- 717
Query: 481 PTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIK 540
T++A + ++ + + S + + + S R G+SV LKGKNTFAVPRNVR LG+ K
Sbjct: 718 -TDKAGAGKRFESRSSKESHKGNEQPSGVRRHGGNSVDLKGKNTFAVPRNVRALGWTTDK 776
Query: 541 PKTEEGEDLKPKSNDEFRKMFIK 563
PKT E +D KPK+NDEFRK++ K
Sbjct: 777 PKTLEQDDEKPKTNDEFRKLYFK 799
>gi|224129810|ref|XP_002328808.1| predicted protein [Populus trichocarpa]
gi|222839106|gb|EEE77457.1| predicted protein [Populus trichocarpa]
Length = 843
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/594 (61%), Positives = 433/594 (72%), Gaps = 57/594 (9%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
NARA EEQIS Q++SD+EK Q +M YLK+E+S GDP RVQ+LYERA+ DFP+S DLWLD
Sbjct: 275 NARAQHEEQISMQNISDTEKIQNFMNYLKFEKSVGDPARVQVLYERAMADFPISIDLWLD 334
Query: 63 YTQYLDKTLK---------VGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEIS 113
YT+YLD+TLK VGNV+RDVYSRATKNCPW+GELWV+ +LSLER RA E+EIS
Sbjct: 335 YTRYLDRTLKIIYTLSLFQVGNVLRDVYSRATKNCPWIGELWVQYMLSLERGRAPEKEIS 394
Query: 114 TVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSE 173
+VFEKSL C FST EEYLDLFLTR+ GLRRRI GEV GVLDYSLIRETFQ ASDYLS
Sbjct: 395 SVFEKSLQCTFSTIEEYLDLFLTRVHGLRRRIECGGEVNGVLDYSLIRETFQHASDYLSP 454
Query: 174 QMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKI------------SGAMLEAWQ 221
+KNTDGLLRLYAYWA LE ++GKD+V+AR VWE LLKI +G+ LEAWQ
Sbjct: 455 HLKNTDGLLRLYAYWARLEMNLGKDLVAARRVWESLLKIRHTIYSIHLVLPNGSTLEAWQ 514
Query: 222 SYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVT 281
+I+ME E HI+EARSIYKRC+SKRF GTGSEDICH+WLRFE E+GTLE FDH++QKVT
Sbjct: 515 GFIAMETESGHISEARSIYKRCFSKRFPGTGSEDICHSWLRFEEEFGTLEAFDHAIQKVT 574
Query: 282 PRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKP 341
PRLEEL+L+R QQE+K+ S DQ E S KK REKRK S + ++SPAKRQK Q
Sbjct: 575 PRLEELKLYRIQQETKA---STDQSEVSGKKIAREKRKGGSTATDKESPAKRQKQTAQTQ 631
Query: 342 KKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINL 401
KK ++ +K Q+Q E NE +E K +E+ D+ P DE S++
Sbjct: 632 KKGYE-DKDQLQKY-EVNEAQEAKIDLEK-------TDSAP-------DEKQMKGSDV-- 673
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
A ED+R+FFSDVGGV+SIRILHD+ TGKSRGLAYVDF+DDEHLAAA+ KNKQ+ GK+
Sbjct: 674 -ANSEDIRKFFSDVGGVASIRILHDRNTGKSRGLAYVDFVDDEHLAAAITKNKQLLFGKR 732
Query: 462 LSIARSNPKQ-RKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR------- 513
LSIARS+PKQ R+D G R P EQA + + + SASKE ++T S +
Sbjct: 733 LSIARSDPKQNRRD--GRRVPREQAFASDRRRHNWESASKE-YVDTHNASGSQEAPQTAT 789
Query: 514 ---GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
D++Q KGKN FAVPRNVR LG A K KT E D KPKSNDEFRKMFIK+
Sbjct: 790 LKSDDNIQFKGKNIFAVPRNVRTLGLSANKSKTVEEGDEKPKSNDEFRKMFIKE 843
>gi|30686462|ref|NP_849551.1| protein embryo defective 140 [Arabidopsis thaliana]
gi|332659481|gb|AEE84881.1| protein embryo defective 140 [Arabidopsis thaliana]
Length = 816
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/573 (57%), Positives = 414/573 (72%), Gaps = 37/573 (6%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M + RAHLEE IS+QDLSD+EKFQ++M Y+K+E++SGDP RVQ +YERA+ ++PVSSDLW
Sbjct: 272 MYSERAHLEENISKQDLSDTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLW 331
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+DYT YLDKTLKVG + YSRAT++CPW G+LW R LL+LER ASE+EI VFEKSL
Sbjct: 332 IDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDLWARYLLALERGSASEKEIYDVFEKSL 391
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FS+FEEYLDL+LTR+DGLRRR+L + +E LDYSLIRETFQ+ASDYL+ M+NTD
Sbjct: 392 QCTFSSFEEYLDLYLTRVDGLRRRMLSTRMLEA-LDYSLIRETFQQASDYLTPHMQNTDS 450
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+ YWA+LE ++GKD+ ARGVW+ LK SG ML AW +YI ME+ L HI EARSIY
Sbjct: 451 LLHLHTYWANLELNIGKDLAGARGVWDSFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIY 510
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
+RCY+++F GTGSEDIC WLRFERE+G LE FD +VQKV PRLEEL+L R QQES +
Sbjct: 511 RRCYTRKFDGTGSEDICKGWLRFEREHGDLEHFDLAVQKVMPRLEELQLMRLQQESTPVK 570
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
SA KEHS +KRK++ N+ E+S AKRQK +K +K D + A +N
Sbjct: 571 PSAGLKEHS-----SQKRKAEQNVE-EESLAKRQK---RKSQKEVDLGGQSATVPATKNV 621
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
E +T + K+ +DA P + K + DECTAF+SN+++KA ED+R+FF D GGV S
Sbjct: 622 KAENGKTADSD--KEETEDAKPLKPKVYRDECTAFISNLSVKAQEEDIRKFFGDDGGVDS 679
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
IRILH K TGK RGLAY DF+DDEHLAAA+AKN++MF GKK+SIARSNPK+ K R
Sbjct: 680 IRILHHKDTGKPRGLAYADFVDDEHLAAAIAKNRKMFFGKKISIARSNPKKGKKEFTRR- 738
Query: 481 PTEQAQSHQQTGNAGTSASKESSI--ETSKQSRG-------RGDSVQLKGKNTFAVPRNV 531
GN G+ SK+ S+ E +K G +G+ V+++GKNTFAVPRNV
Sbjct: 739 -----------GNDGSGNSKDPSLISEKAKAPLGGETEGERKGNEVEVRGKNTFAVPRNV 787
Query: 532 RPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+PLG+ KP +E PKSNDEFR MF+KK
Sbjct: 788 KPLGYTTPKPSADE----TPKSNDEFRNMFLKK 816
>gi|18700131|gb|AAL77677.1| AT4g24270/T22A6_100 [Arabidopsis thaliana]
Length = 816
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/573 (57%), Positives = 413/573 (72%), Gaps = 37/573 (6%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M + RAHLEE IS+QDLSD+EKFQ++M Y+K+E++SGDP RVQ +YERA+ ++PVSSDLW
Sbjct: 272 MYSERAHLEENISKQDLSDTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLW 331
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+DYT YLDKTLKVG + YSRAT++CPW G+LW R LL+LER ASE+EI VFEKSL
Sbjct: 332 IDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDLWARYLLALERGSASEKEIYDVFEKSL 391
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FS+FEEYLDL+LTR+DGLRRR+L + +E LDYSLIRETFQ+ASDYL+ M+NTD
Sbjct: 392 QCTFSSFEEYLDLYLTRVDGLRRRMLSTRMLEA-LDYSLIRETFQQASDYLTPHMQNTDS 450
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+ YWA+LE ++GKD+ ARGVW+ LK SG ML AW +YI ME+ L HI EARSIY
Sbjct: 451 LLHLHTYWANLELNIGKDLAGARGVWDSFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIY 510
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
+RCY+++F GTGSEDIC WLRFERE+G LE FD +VQKV PRLEEL+L R QQES +
Sbjct: 511 RRCYTRKFDGTGSEDICKGWLRFEREHGDLEHFDLAVQKVMPRLEELQLMRLQQESTPVK 570
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
SA KEHS +KRK++ N+ E+S AKRQK +K +K D + A +N
Sbjct: 571 PSAGLKEHS-----SQKRKAEQNVE-EESLAKRQK---RKSQKEVDLGGQSATVPATKNV 621
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
E +T + K+ +D P + K + DECTAF+SN+++KA ED+R+FF D GGV S
Sbjct: 622 KAENGKTADSD--KEETEDVKPLKPKVYRDECTAFISNLSVKAQEEDIRKFFGDDGGVDS 679
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
IRILH K TGK RGLAY DF+DDEHLAAA+AKN++MF GKK+SIARSNPK+ K R
Sbjct: 680 IRILHHKDTGKPRGLAYADFVDDEHLAAAIAKNRKMFFGKKISIARSNPKKGKKEFTRR- 738
Query: 481 PTEQAQSHQQTGNAGTSASKESSI--ETSKQSRG-------RGDSVQLKGKNTFAVPRNV 531
GN G+ SK+ S+ E +K G +G+ V+++GKNTFAVPRNV
Sbjct: 739 -----------GNDGSGNSKDPSLISEKAKAPLGGETEGERKGNEVEVRGKNTFAVPRNV 787
Query: 532 RPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+PLG+ KP +E PKSNDEFR MF+KK
Sbjct: 788 KPLGYTTPKPSADE----TPKSNDEFRNMFLKK 816
>gi|30686466|ref|NP_194158.3| protein embryo defective 140 [Arabidopsis thaliana]
gi|332659482|gb|AEE84882.1| protein embryo defective 140 [Arabidopsis thaliana]
Length = 817
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/574 (57%), Positives = 414/574 (72%), Gaps = 38/574 (6%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M + RAHLEE IS+QDLSD+EKFQ++M Y+K+E++SGDP RVQ +YERA+ ++PVSSDLW
Sbjct: 272 MYSERAHLEENISKQDLSDTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLW 331
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+DYT YLDKTLKVG + YSRAT++CPW G+LW R LL+LER ASE+EI VFEKSL
Sbjct: 332 IDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDLWARYLLALERGSASEKEIYDVFEKSL 391
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FS+FEEYLDL+LTR+DGLRRR+L + +E LDYSLIRETFQ+ASDYL+ M+NTD
Sbjct: 392 QCTFSSFEEYLDLYLTRVDGLRRRMLSTRMLEA-LDYSLIRETFQQASDYLTPHMQNTDS 450
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+ YWA+LE ++GKD+ ARGVW+ LK SG ML AW +YI ME+ L HI EARSIY
Sbjct: 451 LLHLHTYWANLELNIGKDLAGARGVWDSFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIY 510
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
+RCY+++F GTGSEDIC WLRFERE+G LE FD +VQKV PRLEEL+L R QQES +
Sbjct: 511 RRCYTRKFDGTGSEDICKGWLRFEREHGDLEHFDLAVQKVMPRLEELQLMRLQQESTPVK 570
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
SA KEHS +KRK++ N+ E+S AKRQK +K +K D + A +N
Sbjct: 571 PSAGLKEHS-----SQKRKAEQNVE-EESLAKRQK---RKSQKEVDLGGQSATVPATKNV 621
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
E +T + K+ +DA P + K + DECTAF+SN+++KA ED+R+FF D GGV S
Sbjct: 622 KAENGKTADSD--KEETEDAKPLKPKVYRDECTAFISNLSVKAQEEDIRKFFGDDGGVDS 679
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
IRILH K TGK RGLAY DF+DDEHLAAA+AKN++MF GKK+SIARSNPK+ K R
Sbjct: 680 IRILHHKDTGKPRGLAYADFVDDEHLAAAIAKNRKMFFGKKISIARSNPKKGKKEFTRR- 738
Query: 481 PTEQAQSHQQTGNA-GTSASKESSI--ETSKQSRG-------RGDSVQLKGKNTFAVPRN 530
GN G+ SK+ S+ E +K G +G+ V+++GKNTFAVPRN
Sbjct: 739 -----------GNVDGSGNSKDPSLISEKAKAPLGGETEGERKGNEVEVRGKNTFAVPRN 787
Query: 531 VRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
V+PLG+ KP +E PKSNDEFR MF+KK
Sbjct: 788 VKPLGYTTPKPSADE----TPKSNDEFRNMFLKK 817
>gi|297799572|ref|XP_002867670.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313506|gb|EFH43929.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 820
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 326/576 (56%), Positives = 412/576 (71%), Gaps = 42/576 (7%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M + RAHLEE IS +DLSD+EKFQ++M Y+K+E++SGDP RVQ +YERA+ ++PVSSDLW
Sbjct: 275 MYSERAHLEEHISNKDLSDTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLW 334
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+DYT YLDKTLKVG + YSRAT++CPW+G+LW R LL+LER ASE+EI +FEKSL
Sbjct: 335 IDYTMYLDKTLKVGKAITHAYSRATRSCPWIGDLWARYLLALERGSASEKEIYAIFEKSL 394
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FS+FEEYLDL+LTR+DGLRRR+L + VE LDYSLI+ETFQ+ASDYL+ M+NTD
Sbjct: 395 QCTFSSFEEYLDLYLTRVDGLRRRMLSTRMVEA-LDYSLIKETFQQASDYLTPHMQNTDS 453
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+AYWA+LE ++GKD+ ARGVW+ LK SG ML AW +YI ME+ L HI EARSI+
Sbjct: 454 LLHLHAYWANLELNIGKDLAGARGVWDSFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIF 513
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
+RCY+++F GTGSEDIC WLRFERE+G LE FD +VQKV PRLEEL+L R QQES +
Sbjct: 514 RRCYTRKFDGTGSEDICKGWLRFEREHGDLEGFDLAVQKVMPRLEELQLIRLQQESTPVK 573
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKR--QVQNLAEE 358
SA KEH+ +KRK++ N+ E+S AKRQK QK V + +N+ E
Sbjct: 574 PSAGLKEHN-----SQKRKAEPNVE-EESLAKRQKRKGQKEMDVGGQSATVPNTKNVKAE 627
Query: 359 NEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
N G+ EE +DA P + K +TDECTAF+SN+++KA ED+R+FF D GGV
Sbjct: 628 N-GKTADSNKEE------TEDAKPLKPKIYTDECTAFISNLSVKAQEEDIRKFFGDDGGV 680
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
SIRILH K TGK RGLAY DF+DDEHLAAA+AKN+++F GKK+SIARSNPK+ K
Sbjct: 681 DSIRILHHKDTGKPRGLAYADFVDDEHLAAAIAKNRKIFFGKKISIARSNPKKGKKEFTR 740
Query: 479 RAPTEQAQSHQQTGNA-GTSASKESSI--ETSKQSRG-------RGDSVQLKGKNTFAVP 528
R GN G+ SKE S+ E +K G +G+ V+++GKNTF VP
Sbjct: 741 R------------GNVDGSGNSKEPSLISEKAKAPLGGEMEDVRQGNEVEVRGKNTFTVP 788
Query: 529 RNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
R V+PLG+ KP +E PKSNDEFR MF+KK
Sbjct: 789 RQVKPLGYTTPKPSADE----TPKSNDEFRNMFLKK 820
>gi|5051769|emb|CAB45062.1| putative protein [Arabidopsis thaliana]
gi|7269277|emb|CAB79337.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/573 (55%), Positives = 402/573 (70%), Gaps = 52/573 (9%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M + RAHLEE IS+QDLSD+EKFQ++M Y+K+E++SGDP RVQ +YERA+ ++PVSSDLW
Sbjct: 239 MYSERAHLEENISKQDLSDTEKFQEFMNYIKFEKTSGDPTRVQAIYERAVAEYPVSSDLW 298
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+DYT YLDKTLKVG + YSRAT++CPW G+LW R LL+LER ASE+EI
Sbjct: 299 IDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDLWARYLLALERGSASEKEIY------- 351
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
+YLDL+LTR+DGLRRR+L + +E LDYSLIRETFQ+ASDYL+ M+NTD
Sbjct: 352 --------DYLDLYLTRVDGLRRRMLSTRMLEA-LDYSLIRETFQQASDYLTPHMQNTDS 402
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+ YWA+LE ++GKD+ ARGVW+ LK SG ML AW +YI ME+ L HI EARSIY
Sbjct: 403 LLHLHTYWANLELNIGKDLAGARGVWDSFLKKSGGMLAAWHAYIDMEVHLGHIKEARSIY 462
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
+RCY+++F GTGSEDIC WLRFERE+G LE FD +VQKV PRLEEL+L R QQES +
Sbjct: 463 RRCYTRKFDGTGSEDICKGWLRFEREHGDLEHFDLAVQKVMPRLEELQLMRLQQESTPVK 522
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
SA KEHS +KRK++ N+ E+S AKRQK +K +K D + A +N
Sbjct: 523 PSAGLKEHS-----SQKRKAEQNVE-EESLAKRQK---RKSQKEVDLGGQSATVPATKNV 573
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
E +T + K+ +DA P + K + DECTAF+SN+++KA ED+R+FF D GGV S
Sbjct: 574 KAENGKTADSD--KEETEDAKPLKPKVYRDECTAFISNLSVKAQEEDIRKFFGDDGGVDS 631
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
IRILH K TGK RGLAY DF+DDEHLAAA+AKN++MF GKK+SIARSNPK+ K R
Sbjct: 632 IRILHHKDTGKPRGLAYADFVDDEHLAAAIAKNRKMFFGKKISIARSNPKKGKKEFTRR- 690
Query: 481 PTEQAQSHQQTGNAGTSASKESSI--ETSKQSRG-------RGDSVQLKGKNTFAVPRNV 531
GN G+ SK+ S+ E +K G +G+ V+++GKNTFAVPRNV
Sbjct: 691 -----------GNDGSGNSKDPSLISEKAKAPLGGETEGERKGNEVEVRGKNTFAVPRNV 739
Query: 532 RPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+PLG+ KP +E PKSNDEFR MF+KK
Sbjct: 740 KPLGYTTPKPSADE----TPKSNDEFRNMFLKK 768
>gi|147768657|emb|CAN60613.1| hypothetical protein VITISV_003252 [Vitis vinifera]
Length = 948
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/644 (49%), Positives = 398/644 (61%), Gaps = 116/644 (18%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERA----------- 49
M +ARAHLEEQI RQD+SDSE+ QQ++ YL +EQSSGDP RVQ+LYERA
Sbjct: 291 MYDARAHLEEQIVRQDISDSERHQQFLNYLNFEQSSGDPARVQILYERAITEFPVSRDLW 350
Query: 50 ------------------------ITDFPVSSDLWLDY--------------TQYLDKTL 71
+ + P +LW+ Y + ++D+
Sbjct: 351 LDYTQYLDKTLKVANVVRDVYSRAVKNCPWVGELWVQYLLSLERARASEREISTFVDREY 410
Query: 72 KV----------GNVVR-------------DVYSRATKNCPWVGE-LWVRSLLSLERSRA 107
G VR +++++ WVG+ + + +++SL A
Sbjct: 411 SAPSHTPHSQPNGYTVRLNPLALHWLKSYLRTFTKSSPVAAWVGKPVLIDAIISLLLIEA 470
Query: 108 S------EEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR 161
++ S VF+KSL C FS FEEYL+LFLTR+DGLRRRI G+ E VLDY+LIR
Sbjct: 471 CLMGSYFDQVDSKVFDKSLQCTFSRFEEYLNLFLTRVDGLRRRISLPGQ-EEVLDYALIR 529
Query: 162 ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQ 221
+ FQ ASDYLS +K TD L+RL+AYWA LE ++ KD+V+ARGVWERLLK SG+M AWQ
Sbjct: 530 DAFQYASDYLSPHLKCTDDLVRLHAYWARLELNLNKDLVAARGVWERLLKNSGSMFGAWQ 589
Query: 222 SYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVT 281
YI+ME+E HINEARSIYKRCYSKRF GT SEDICH+WLRFERE+GTLED +H+V+KVT
Sbjct: 590 GYIAMELEAGHINEARSIYKRCYSKRFAGTVSEDICHSWLRFEREFGTLEDLEHAVRKVT 649
Query: 282 PRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKP 341
PRL EL+LF+ QESKS S DQ E+ KK REKRKS S+ + EQ PAKRQK Q P
Sbjct: 650 PRLAELQLFK-LQESKSTAASTDQIENPHKKNAREKRKSSSSRTDEQPPAKRQKDTAQNP 708
Query: 342 KKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINL 401
KKV K + +++N+ NE +E K +++P D + KG + E
Sbjct: 709 KKVDGKGRIELENVVASNEEQELKAR-DDKPD-----DMNKRQMKGPSHEKN-------- 754
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
+DVGGV++IRIL DKFTGKSRGLAYVDF DD HLAAAVAKNK+M GK+
Sbjct: 755 -----------NDVGGVTAIRILKDKFTGKSRGLAYVDFSDDAHLAAAVAKNKKMLRGKR 803
Query: 462 LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESS-IETSKQSRG-RGDSVQL 519
LSIARS+PKQ+ +G S+ QTG G S SKES I +SK + R D+ QL
Sbjct: 804 LSIARSDPKQKGKGAG--------HSNDQTGTVGESDSKESGQISSSKAPQARRDDNFQL 855
Query: 520 KGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
KG+NTFAVPRNVRPLG+ K KTEE D PKSNDEFRKM +K
Sbjct: 856 KGRNTFAVPRNVRPLGWIDKKKKTEEETDEMPKSNDEFRKMLLK 899
>gi|413941668|gb|AFW74317.1| hypothetical protein ZEAMMB73_670043 [Zea mays]
Length = 837
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 276/579 (47%), Positives = 390/579 (67%), Gaps = 34/579 (5%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M N R E+Q+S + +K QQ+M Y+K+E++SGDP RVQ+LYERA+++ PVSSD+W
Sbjct: 278 MYNERKQYEDQLSNAGTFEGDKLQQFMKYIKFEEASGDPARVQVLYERAVSELPVSSDIW 337
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+ YT YLD+TLKV +VVR VY RAT+NC WVGELWV LLSLER RASEEE+ VFE+++
Sbjct: 338 MGYTSYLDRTLKVPSVVRSVYYRATRNCTWVGELWVHYLLSLERIRASEEELQHVFERAI 397
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C FST +EY +++LTR+ GLRRRI LD+ LIR+T A+++LS Q+ +T
Sbjct: 398 QCTFSTIQEYFNIYLTRVHGLRRRI------SDGLDFQLIRQTLTDAAEFLSSQL-STKE 450
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LLRLYAYWA LE S+GKD+ +ARGVWE +K SG++ E W+ YI MEI++DH++EARS+Y
Sbjct: 451 LLRLYAYWAKLELSLGKDLSAARGVWENAIKKSGSVFEVWEQYILMEIKMDHVHEARSLY 510
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCYSKRF G+GSE+IC++W+RFE E GTL+D+D +V+KVTPRL+EL F+SQ+E+K +
Sbjct: 511 KRCYSKRFAGSGSEEICYSWIRFEEENGTLDDYDLAVKKVTPRLKELMTFKSQEEAK-VE 569
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQN-----L 355
+ ++S +KRK +N +Q PAK++K P K D + VQ+ +
Sbjct: 570 AYPNLNDNSNANDSSQKRKPSNN--KQQPPAKKRKENPPKSTMPSDDQGSNVQSGHSGAV 627
Query: 356 AEENEGRETKQTVEEQPKKQPIKDAVPGRTKG-------FTDECTAFLSNINLKATYEDL 408
+ G +++ V + + D+ G++ + D CT F+SNI+LKA +DL
Sbjct: 628 TDVEVGGASREKVMASIEMKVDSDSRTGKSSSNEPKPSFYNDNCTVFVSNIDLKANEDDL 687
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSN 468
RRFFSD+GG ++IR+L D+FT KSRGLAYVDF+D++HL AA+ KNKQ LGKK+SIARS+
Sbjct: 688 RRFFSDIGGATAIRLLRDRFTKKSRGLAYVDFLDNKHLEAAIKKNKQKLLGKKVSIARSD 747
Query: 469 PKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVP 528
P + K S R + +Q + + + SS ++ +G ++ GKNT P
Sbjct: 748 PSKGKKS---REAGQTSQDNLPPSGGDDAKATGSSGPDNEVPKGDAKTI---GKNTLFAP 801
Query: 529 RN-VRPLGFPAIKPKTEEGEDL--KPKSNDEFRKMFIKK 564
R V+PLG+ K E+ D+ + KSN+EFR + +KK
Sbjct: 802 RALVKPLGWTN---KDEKKPDVAGELKSNEEFRNLLLKK 837
>gi|222639796|gb|EEE67928.1| hypothetical protein OsJ_25804 [Oryza sativa Japonica Group]
Length = 847
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 284/580 (48%), Positives = 395/580 (68%), Gaps = 40/580 (6%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M N R E+Q+S D SD +K ++++ Y+K+E+SSGDP RVQ+LYERA+ + PVS+DLW
Sbjct: 292 MYNVRKQYEDQLSNADASDDDKLEEFLKYIKFEESSGDPARVQVLYERAVAELPVSTDLW 351
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+ YT YLDKTLKV V++ VY RAT+NC W+ ELWVR LLSLER RASEEE+ VFE++L
Sbjct: 352 MGYTSYLDKTLKVPAVLKSVYQRATRNCTWISELWVRYLLSLERIRASEEELRHVFEQAL 411
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C+F + +EYL+++LTR+D LRRR+ +G LD+ LIR+TF A+++LS QM T+
Sbjct: 412 QCSFPSIKEYLEIYLTRVDSLRRRM-----ADG-LDFQLIRQTFMDATEFLSPQM-GTED 464
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+AYWA LE+++G D+ +ARGVWE LK SG++LE WQ YI+MEIE +HI+EARS+Y
Sbjct: 465 LLLLHAYWAKLERTLGNDLAAARGVWENTLKKSGSVLEVWQHYIAMEIETEHIHEARSLY 524
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCY+KRF+G+GSE+ICHAW+RFERE GTLED+D +V+KV PRL+EL +F++QQE K
Sbjct: 525 KRCYTKRFSGSGSEEICHAWIRFERECGTLEDYDLAVKKVNPRLKELMMFKAQQEVKV-- 582
Query: 301 ESADQKEHSVKK--TG---REKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE--KRQVQ 353
H V K TG +KRKS + +Q PAK++K P K + D K Q+
Sbjct: 583 -----DTHVVPKETTGSDFSQKRKSSKIPTKQQPPAKKKKDNPPKSAVLSDDHGSKEQIS 637
Query: 354 N---LAEENEGRETKQTVEEQ---PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
E G +T+ ++E ++ + ++ ++D+CTA++SNI+L A E
Sbjct: 638 TGHVKTGEVSGEKTQASMEVNLVDGSRRENTASKESKSNFYSDKCTAYMSNIDLTANEEH 697
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+RRFFSD+GGV++IR+L DKFT KSRG+AYVDF D+EHL AA+ KNK L KK+S+ARS
Sbjct: 698 IRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARS 757
Query: 468 NP-KQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFA 526
+P K +K+ +QA S + A + + I K + + GKNTFA
Sbjct: 758 DPSKGKKNREAGSFSKDQATSGDRGETAEFANRPDKEIPKDKPT--------ITGKNTFA 809
Query: 527 VPRN-VRPLGFPAIKPKTEEG-EDLKPKSNDEFRKMFIKK 564
PR+ V+PLG+ K++ G E+L KSN+EFR + +KK
Sbjct: 810 APRSVVKPLGWTQKDEKSDVGAEEL--KSNEEFRNLLLKK 847
>gi|115474483|ref|NP_001060838.1| Os08g0113200 [Oryza sativa Japonica Group]
gi|42408364|dbj|BAD09516.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622807|dbj|BAF22752.1| Os08g0113200 [Oryza sativa Japonica Group]
Length = 838
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 284/580 (48%), Positives = 395/580 (68%), Gaps = 40/580 (6%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M N R E+Q+S D SD +K ++++ Y+K+E+SSGDP RVQ+LYERA+ + PVS+DLW
Sbjct: 283 MYNVRKQYEDQLSNADASDDDKLEEFLKYIKFEESSGDPARVQVLYERAVAELPVSTDLW 342
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+ YT YLDKTLKV V++ VY RAT+NC W+ ELWVR LLSLER RASEEE+ VFE++L
Sbjct: 343 MGYTSYLDKTLKVPAVLKSVYQRATRNCTWISELWVRYLLSLERIRASEEELRHVFEQAL 402
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C+F + +EYL+++LTR+D LRRR+ +G LD+ LIR+TF A+++LS QM T+
Sbjct: 403 QCSFPSIKEYLEIYLTRVDSLRRRM-----ADG-LDFQLIRQTFMDATEFLSPQM-GTED 455
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+AYWA LE+++G D+ +ARGVWE LK SG++LE WQ YI+MEIE +HI+EARS+Y
Sbjct: 456 LLLLHAYWAKLERTLGNDLAAARGVWENTLKKSGSVLEVWQHYIAMEIETEHIHEARSLY 515
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCY+KRF+G+GSE+ICHAW+RFERE GTLED+D +V+KV PRL+EL +F++QQE K
Sbjct: 516 KRCYTKRFSGSGSEEICHAWIRFERECGTLEDYDLAVKKVNPRLKELMMFKAQQEVKV-- 573
Query: 301 ESADQKEHSVKK--TG---REKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE--KRQVQ 353
H V K TG +KRKS + +Q PAK++K P K + D K Q+
Sbjct: 574 -----DTHVVPKETTGSDFSQKRKSSKIPTKQQPPAKKKKDNPPKSAVLSDDHGSKEQIS 628
Query: 354 N---LAEENEGRETKQTVEEQ---PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
E G +T+ ++E ++ + ++ ++D+CTA++SNI+L A E
Sbjct: 629 TGHVKTGEVSGEKTQASMEVNLVDGSRRENTASKESKSNFYSDKCTAYMSNIDLTANEEH 688
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+RRFFSD+GGV++IR+L DKFT KSRG+AYVDF D+EHL AA+ KNK L KK+S+ARS
Sbjct: 689 IRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARS 748
Query: 468 NP-KQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFA 526
+P K +K+ +QA S + A + + I K + + GKNTFA
Sbjct: 749 DPSKGKKNREAGSFSKDQATSGDRGETAEFANRPDKEIPKDKPT--------ITGKNTFA 800
Query: 527 VPRN-VRPLGFPAIKPKTEEG-EDLKPKSNDEFRKMFIKK 564
PR+ V+PLG+ K++ G E+L KSN+EFR + +KK
Sbjct: 801 APRSVVKPLGWTQKDEKSDVGAEEL--KSNEEFRNLLLKK 838
>gi|125559928|gb|EAZ05376.1| hypothetical protein OsI_27580 [Oryza sativa Indica Group]
Length = 838
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/580 (48%), Positives = 394/580 (67%), Gaps = 40/580 (6%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M N R E+Q+S D SD +K ++++ Y+K+E+SSGDP RVQ+LYERA+ + PVS+DLW
Sbjct: 283 MYNVRKQYEDQLSNADASDGDKLEEFLKYIKFEESSGDPARVQVLYERAVAELPVSTDLW 342
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
+ YT YLDKTLKV V++ VY RAT+NC W+ ELWVR LLSLER RASEEE+ VFE++L
Sbjct: 343 MGYTSYLDKTLKVPAVLKSVYQRATRNCTWISELWVRYLLSLERIRASEEELRHVFEQAL 402
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C+F + +EYL+++LTR+D LRRR+ +G LD+ LIR+TF A+++LS QM T+
Sbjct: 403 QCSFPSIKEYLEIYLTRVDSLRRRM-----ADG-LDFQLIRQTFMDATEFLSPQM-GTED 455
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIY 240
LL L+AYWA LE+++G D+ +ARGVWE LK SG++LE WQ YI+MEIE +HI+EARS+Y
Sbjct: 456 LLLLHAYWAKLERTLGNDLAAARGVWENTLKKSGSVLEVWQHYIAMEIETEHIHEARSLY 515
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
KRCY+KRF+G+GSE+ICHAW+RFERE GTLED+D +V+KV PRL+EL +F++QQE K
Sbjct: 516 KRCYTKRFSGSGSEEICHAWIRFERECGTLEDYDLAVKKVNPRLKELMMFKAQQEVKV-- 573
Query: 301 ESADQKEHSVKK--TG---REKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE--KRQVQ 353
H V K TG +KRKS + +Q PAK++K P + D K Q+
Sbjct: 574 -----DTHVVPKETTGSDFSQKRKSSKIPTKQQPPAKKKKDNPPNSAVLSDDHGSKEQIS 628
Query: 354 N---LAEENEGRETKQTVEEQ---PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
E G +T+ ++E ++ + ++ ++D+CTA++SNI+L A E
Sbjct: 629 TGHVKTGEVSGEKTQASMEVNLVDGSRRENTASKESKSNFYSDKCTAYMSNIDLTANEEH 688
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+RRFFSD+GGV++IR+L DKFT KSRG+AYVDF D+EHL AA+ KNK L KK+S+ARS
Sbjct: 689 IRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVDFSDNEHLEAAIRKNKHKLLAKKVSVARS 748
Query: 468 NP-KQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFA 526
+P K +K+ +QA S + A + + I K + + GKNTFA
Sbjct: 749 DPSKGKKNREAGSFSKDQATSGDRGETAEFANRPDKEIPKDKPT--------ITGKNTFA 800
Query: 527 VPRN-VRPLGFPAIKPKTEEG-EDLKPKSNDEFRKMFIKK 564
PR+ V+PLG+ K++ G E+L KSN+EFR + +KK
Sbjct: 801 APRSVVKPLGWTQKDEKSDVGAEEL--KSNEEFRNLLLKK 838
>gi|357139487|ref|XP_003571313.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Brachypodium distachyon]
Length = 827
Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/571 (47%), Positives = 375/571 (65%), Gaps = 31/571 (5%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
NAR E+Q++ SD++K Q ++ Y+K+E+S GDP RVQ+LYERA+++FPVS+DLW+
Sbjct: 279 NARKQYEDQLNNVSASDADKLQAFLKYIKFEESCGDPARVQVLYERAVSEFPVSNDLWMG 338
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y YLD+TLKV V++ VY RAT+NC WV +LW+R LLSLER ASE+E+ VFE+++ C
Sbjct: 339 YMSYLDRTLKVPAVLKSVYHRATRNCTWVSDLWIRYLLSLERIHASEDELRHVFEQAIRC 398
Query: 123 AFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLL 182
+F +EYLD++LTR+D LRRR+ LD+ LIR+TF A+++LS + + LL
Sbjct: 399 SF-PMKEYLDIYLTRVDSLRRRM------PAGLDFQLIRQTFVDAAEFLSPHL-GIEELL 450
Query: 183 RLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKR 242
AYWA LE ++GKD+ + RGVWE LK SG+ LE WQ YISMEIE+ H EARS+YKR
Sbjct: 451 PFNAYWARLECNIGKDLAAGRGVWENALKKSGSCLEVWQHYISMEIEMGHTQEARSLYKR 510
Query: 243 CYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPES 302
CYSK+F G+GSE IC++W+RFEREYGTL+D+D +V+KVTPRL+EL +F++QQ++KS P S
Sbjct: 511 CYSKKFAGSGSEVICYSWIRFEREYGTLDDYDLAVKKVTPRLKELMMFKAQQDAKSDPYS 570
Query: 303 ADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE--KRQVQNLAEENE 360
KE S +KRK S Q PAK++K P K D K N + +
Sbjct: 571 V-PKETSYANDSSQKRKPSKMTSKVQPPAKKRKDNPPKNTVSSDDHGLKEPSTNNSVQEA 629
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKG--FTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
G+ +++ E + + + K ++D+CTA++SNI+L AT +RRFFSD+GGV
Sbjct: 630 GKASREKAEASMESSQGGNKSSNQPKPYLYSDKCTAYMSNIDLTATEMHIRRFFSDIGGV 689
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNP-KQRKDSSG 477
+ IR+L D+FT KSRGLAYVDF+D EHL AA+ KNKQ L KK+SIA S+P K +K+
Sbjct: 690 ADIRLLRDRFTKKSRGLAYVDFLDKEHLEAAIKKNKQKLLSKKVSIAHSDPSKSKKNREA 749
Query: 478 ERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNV-RPLGF 536
+ Q + ++ A S+ KE +GD+ + K KN PR V +P G+
Sbjct: 750 GTSSKGQGEHGEKPPVAAGSSDKEMP---------KGDT-KTKAKNMLFAPRAVMKPRGW 799
Query: 537 PAIKPKTEEGEDLKP---KSNDEFRKMFIKK 564
K +E D+ P KSNDEFR + +KK
Sbjct: 800 ---NKKDDEKPDVAPEELKSNDEFRNLLLKK 827
>gi|358349250|ref|XP_003638652.1| Squamous cell carcinoma antigen recognized by T-cells [Medicago
truncatula]
gi|355504587|gb|AES85790.1| Squamous cell carcinoma antigen recognized by T-cells [Medicago
truncatula]
Length = 918
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/411 (58%), Positives = 293/411 (71%), Gaps = 21/411 (5%)
Query: 165 QRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYI 224
QRASDYLS MKNTDGLL+++AYWAHLE +GKD+ +ARGVWE LK G+ML AW YI
Sbjct: 518 QRASDYLSPYMKNTDGLLQIHAYWAHLETKLGKDITAARGVWENFLKTCGSMLAAWTGYI 577
Query: 225 SMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
+ME+EL HINEARSIYKRCYSKRF GTGSEDIC++WLRFERE+G LEDFD ++QKVTPRL
Sbjct: 578 AMEVELGHINEARSIYKRCYSKRFYGTGSEDICNSWLRFEREFGKLEDFDLALQKVTPRL 637
Query: 285 EELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKV 344
EELRLFR QQESKS+ ES E++ +K EKRK ++I+ EQSPAKR+K A +K +K
Sbjct: 638 EELRLFRLQQESKSVEES----ENNPRKNVGEKRKPGADIADEQSPAKRKKDAGKKIQKA 693
Query: 345 HDKEKRQVQNLAEEN--EGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
QVQN + EG K + +KQ + G+ + ++D+CTAFLSN+N
Sbjct: 694 PKDNIDQVQNSTQVTKVEGSNQKNNKSDDSQKQQL---TRGKHRAYSDQCTAFLSNLNPT 750
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
A +R FFSD+GG+ +IRILHDKFTGKSRGLAYVDF+DDEHL AAVAKNK LGKKL
Sbjct: 751 ANDGHIRDFFSDIGGIVAIRILHDKFTGKSRGLAYVDFLDDEHLVAAVAKNKNTLLGKKL 810
Query: 463 SIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQ--------SRGRG 514
SIARSNPK+ + +E + G S SKE+ +TSK+ SR G
Sbjct: 811 SIARSNPKRGGKETSNPKKSEHEHDIDHSDKKG-SVSKETD-DTSKKDVKDGKFSSRKPG 868
Query: 515 -DSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
D++Q KGKNTFAVPRNVR LG KPK E G D +PKSN+EFRKMFI++
Sbjct: 869 SDNIQFKGKNTFAVPRNVRALGCTENKPKAEVG-DEQPKSNEEFRKMFIQR 918
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 160/224 (71%), Gaps = 18/224 (8%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M NAR HLEEQIS QD+SDSE+ QQYM YLK+EQSSG P R+Q+LYERAITDFP+S DLW
Sbjct: 267 MYNARVHLEEQISSQDISDSERLQQYMNYLKFEQSSGTPARIQVLYERAITDFPLSPDLW 326
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYT YLDKTLKVG +V DVYSRATKNCPWVGELWVR +L LER ASE++++ +FEKSL
Sbjct: 327 LDYTHYLDKTLKVGKIVSDVYSRATKNCPWVGELWVRYMLCLERGHASEKDLAAIFEKSL 386
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQ----RASDYLSEQMK 176
C FST +EYLDLFLTR+DGLRRR+ F+ E E L+Y +I+ETFQ + + L E +K
Sbjct: 387 QCTFSTLDEYLDLFLTRVDGLRRRMTFTKE-EDPLEYKIIKETFQFEVKGSHEELPETIK 445
Query: 177 NTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAW 220
+ L M K +V VW LL I +L W
Sbjct: 446 MDQNQMDL----------MTKYVVV---VWFTLLAIPTHVLPYW 476
>gi|168035835|ref|XP_001770414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678291|gb|EDQ64751.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 776
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/578 (41%), Positives = 343/578 (59%), Gaps = 26/578 (4%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M AR E I+ + D + Q Y+ Y+ E+++GDP R Q+LYERA++ FPV+ ++W
Sbjct: 210 MSKARGLFENNITAEKPVDGDLLQHYLEYISVEEATGDPARAQILYERALSVFPVTHEVW 269
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
L YT YLD LKV +V+R VY+RA +NCPWVG LW + +L+LER+ A E E+S VFE +L
Sbjct: 270 LKYTHYLDVNLKVASVLRSVYARAVRNCPWVGALWTKYMLALERAAAPETELSVVFETAL 329
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFS-GEVEGVLDYSLIRETFQRASDYLSEQMKN-T 178
C F + EY +++ TR GLRRRI+ + + +++L+ +TF+R +++LS +
Sbjct: 330 GCGFQSPNEYEEVYSTRAHGLRRRIMAADANSDQTSNFTLLHDTFERGTEFLSTYFPDHV 389
Query: 179 DGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARS 238
+ +RL+ YWAHLE ++ KD+ +ARGVWE L+K G MLE WQ+YISME+ L ++ EAR+
Sbjct: 390 NHNIRLWTYWAHLEATLLKDITAARGVWENLIKTHGWMLEVWQNYISMELLLGNVKEART 449
Query: 239 IYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKS 298
+YKRCYS+R GTG++ +C AWLRFE E+G LED+D + QK + E +++ Q S
Sbjct: 450 LYKRCYSRRLEGTGTQVMCAAWLRFEEEHGALEDYDRAEQKQSTGTERVKMESRPQPSDK 509
Query: 299 LPESADQKEHSVKKTGREK----RKSDSNISYEQSPAKRQKHAPQKPKKVHDK----EKR 350
+ +D K S K T RK + ++ KRQK P+ + D+ E
Sbjct: 510 VKPKSDVKSRSSKITDNASKTSGRKRGLGNAESENAVKRQK-VPKVTAQDTDQPGASETA 568
Query: 351 QVQNLAEENEGRETKQTVEEQPKK-QPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLR 409
E G++++ E PK+ + + AV FTDECTAFLSN+ + T EDL+
Sbjct: 569 AGIVTGMEEAGQKSENASRELPKQVKELNKAVV-----FTDECTAFLSNVAFEVTEEDLK 623
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNP 469
FFS V +RIL ++ T + RGLAYVDF D+E L AA+AKNK+ G++LSIARS+P
Sbjct: 624 EFFSPSSRVKEVRILRERGTARPRGLAYVDFEDEESLTAAIAKNKEELKGRQLSIARSDP 683
Query: 470 KQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPR 529
K + + S ++ + RG ++L G NTFAVPR
Sbjct: 684 KGGRGGG------RGSGSSRRGRTSALGRGGRGLAGPPTVGHRRGGHLKLTGSNTFAVPR 737
Query: 530 NV-RPLGF--PAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
NV RPLG+ P + PKSN EFR+MF+K+
Sbjct: 738 NVPRPLGWGNPLATSSSNASGGEVPKSNTEFREMFLKQ 775
>gi|302755076|ref|XP_002960962.1| hypothetical protein SELMODRAFT_402481 [Selaginella moellendorffii]
gi|300171901|gb|EFJ38501.1| hypothetical protein SELMODRAFT_402481 [Selaginella moellendorffii]
Length = 755
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/565 (40%), Positives = 337/565 (59%), Gaps = 91/565 (16%)
Query: 18 SDSEKFQQYMIYLKYEQ--SSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGN 75
+D+E Q Y+IY+ +EQ S DP RVQ+L+ERA+T FPVSSDLWL YT YLD+ LKV
Sbjct: 256 ADAELLQNYLIYIDFEQKKSKSDPARVQVLFERAVTAFPVSSDLWLKYTGYLDQKLKVAV 315
Query: 76 VVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFL 135
V ++VY+RA +NCPWVGELW + LL+LER +S+EE+S VFE+S+ F T EYLD+FL
Sbjct: 316 VCKNVYARAVRNCPWVGELWRKYLLTLERFNSSDEEMSEVFEQSMKRGFQTPSEYLDVFL 375
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQS 194
TR+DGLRR++ VE +RE FQRA+D L+ + D LRL YWA +E
Sbjct: 376 TRVDGLRRQM---ASVE------RLREVFQRAADLLANYFPDFVDRSLRLQGYWARMEVR 426
Query: 195 MGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+ KD+ +AR +WERL+K SG M E WQ YI+ME+ L++INE R++Y++CYS++ G GS+
Sbjct: 427 LAKDISAARSIWERLVKSSGWMTEVWQGYINMELGLENINEVRALYRKCYSRKLEGNGSK 486
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTG 314
IC WL+FERE+GTLEDF+ + K RLEE++ + Q+++ E + E +++
Sbjct: 487 VICEGWLQFEREFGTLEDFEKASLKAGQRLEEIQSIEAVQDTEEFKEPRMKHERGNQESS 546
Query: 315 RE--KRKSDSNISYEQSPAKRQKHAPQK-PKKVHDKEKRQVQNLAEENEGRETKQTVEEQ 371
+ KRK ++ E+ KRQK AP++ P K+H + K NEG + + E+
Sbjct: 547 AQAAKRKRPKDVKEEK---KRQKVAPKREPGKLHSEAKMAT------NEG-DRDASEREK 596
Query: 372 PKKQPIKDAVPGRTKG-------------FTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
P +Q P T G FTDE TAF+SNI+L+ T ++L+ FF+ GG+
Sbjct: 597 PNEQ---GQAPATTDGRGEAATQFKKNRVFTDELTAFVSNIDLELTEKELKEFFAPCGGL 653
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
+R+L D+ T +SRGLAY+DF ++E+LAAA++KN+ +K+S+ARS PK +++ E
Sbjct: 654 KGVRLLRDRNTRRSRGLAYIDFENEENLAAAISKNRTKLGARKVSVARSKPKPKQEGGSE 713
Query: 479 RAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPA 538
+ +E K ++PLG+
Sbjct: 714 K------------------------VERDK----------------------IKPLGWQG 727
Query: 539 IKPKTEEGEDLKPKSNDEFRKMFIK 563
PK++E + SN+EFRK +K
Sbjct: 728 SAPKSDEALN----SNEEFRKTLLK 748
>gi|302767250|ref|XP_002967045.1| hypothetical protein SELMODRAFT_408389 [Selaginella moellendorffii]
gi|300165036|gb|EFJ31644.1| hypothetical protein SELMODRAFT_408389 [Selaginella moellendorffii]
Length = 777
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/503 (42%), Positives = 313/503 (62%), Gaps = 38/503 (7%)
Query: 18 SDSEKFQQYMIYLKYEQ--SSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGN 75
+D+E Q Y+IY+ +EQ S DP RVQ+L+ERA+T FPVS DLWL YT YLD+ LKV
Sbjct: 261 ADAELLQNYLIYIDFEQKKSKSDPARVQVLFERAVTAFPVSGDLWLKYTGYLDQKLKVAV 320
Query: 76 VVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFL 135
V ++VY+RA +NCPWVGELW + LL+LER +S+EE+S VFE+S+ F T EYLD+FL
Sbjct: 321 VCKNVYARAVRNCPWVGELWRKYLLTLERFNSSDEEMSEVFEQSMKRGFQTPSEYLDVFL 380
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQS 194
TR+DGLRR++ VE +RE FQRA+D L+ + D LRL YWA +E
Sbjct: 381 TRVDGLRRQM---ASVE------RLREVFQRAADLLANYFPDFVDRSLRLQGYWARMEVR 431
Query: 195 MGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+ KD+ +AR +WERL+K SG M E WQ YI+ME+ L++INE R++Y++CYS++ G GS+
Sbjct: 432 LAKDISAARSIWERLVKSSGWMTEVWQGYINMELGLENINEVRALYRKCYSRKLEGNGSK 491
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTG 314
IC AWL+FERE+GTLEDF+ + K RLEE++ + Q++K E + E +++
Sbjct: 492 VICEAWLQFEREFGTLEDFEKASLKAGQRLEEIQSIEAVQDTKEFKEPKMKHERGNQESS 551
Query: 315 RE--KRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQP 372
+ KRK ++ E+ KRQK AP++ E + N + + K + QP
Sbjct: 552 AQAAKRKRPKDVKEEK---KRQKVAPKRELGKLHSEAKMATNEGDRDASEREKPNEQGQP 608
Query: 373 KKQPIKDAVP-GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK 431
+ A + + FTDE TAF+SNI+L+ T ++L+ FF+ GG+ +R+L D+ T +
Sbjct: 609 PDGRGEAATQFKKNRVFTDELTAFVSNIDLELTEKELKEFFTPCGGLKGVRLLRDRNTRR 668
Query: 432 SR--------------------GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
SR GLAY+DF ++E+LAAA++KN+ +K+S+ARS PK
Sbjct: 669 SRVKTKSCETEFTFLTKLLPMQGLAYIDFENEENLAAAISKNRTKLGARKVSVARSKPKP 728
Query: 472 RKDSSGERAPTEQAQSHQQTGNA 494
+++ E+ ++ + G+A
Sbjct: 729 KQEGGSEKVERDKIKPLGWQGSA 751
>gi|449529363|ref|XP_004171669.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like, partial [Cucumis sativus]
Length = 256
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/212 (72%), Positives = 184/212 (86%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
M NAR LE+QIS+QDL+D+E+ QY+IYLK+EQS+GDP RVQ+L+ERAI DFPVS DLW
Sbjct: 45 MYNARVQLEDQISKQDLTDTERLHQYIIYLKFEQSAGDPARVQVLFERAIADFPVSVDLW 104
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
LDYT Y+DKTLKVGN+VR+VYSRAT+NCPW+G+LWVR LL+LERS ASE EI++VF KSL
Sbjct: 105 LDYTCYMDKTLKVGNIVRNVYSRATRNCPWIGDLWVRYLLALERSHASEGEIASVFGKSL 164
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
C+FST +EYLDLFLTRIDGLRRRI ++E L+YSLIRETFQRASDYLS +KN++
Sbjct: 165 QCSFSTLDEYLDLFLTRIDGLRRRISSGVQLEDALEYSLIRETFQRASDYLSPHLKNSEV 224
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKI 212
L+RLYAYWA LE +MGK++ SARGVWE LLKI
Sbjct: 225 LVRLYAYWARLEINMGKNLDSARGVWESLLKI 256
>gi|449529417|ref|XP_004171696.1| PREDICTED: uncharacterized protein LOC101228970, partial [Cucumis
sativus]
Length = 230
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/239 (53%), Positives = 170/239 (71%), Gaps = 9/239 (3%)
Query: 195 MGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
MGK++ SARGVWE LLKI G++ AW+ YI+ME+EL+HIN ARSIYKRCYSKRF G+GSE
Sbjct: 1 MGKNLDSARGVWESLLKICGSLSAAWEGYIAMEVELNHINNARSIYKRCYSKRFPGSGSE 60
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTG 314
DICH+WLRFERE+G+LEDFDH+V+KV PRLEEL+ ++ Q D E+ VK+
Sbjct: 61 DICHSWLRFEREFGSLEDFDHAVRKVNPRLEELKSYKLQ---------IDDSENPVKQND 111
Query: 315 REKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKK 374
R KRK + +SPAK+ K + PKKV +K K Q++N+ ++ + +
Sbjct: 112 RSKRKLGGDAPNVESPAKKLKDSAHGPKKVTEKGKAQLENVDDQTGDIRGRVKKLDDISD 171
Query: 375 QPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
Q + D++ + K + D+CTAF+SN+NLK TY+ LR FF DVGGV +IRILHDKFTGKSR
Sbjct: 172 QQMNDSIQEKGKVYNDQCTAFISNLNLKVTYDHLRDFFQDVGGVVAIRILHDKFTGKSR 230
>gi|413941667|gb|AFW74316.1| hypothetical protein ZEAMMB73_670043 [Zea mays]
Length = 342
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 220/354 (62%), Gaps = 27/354 (7%)
Query: 226 MEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLE 285
MEI++DH++EARS+YKRCYSKRF G+GSE+IC++W+RFE E GTL+D+D +V+KVTPRL+
Sbjct: 1 MEIKMDHVHEARSLYKRCYSKRFAGSGSEEICYSWIRFEEENGTLDDYDLAVKKVTPRLK 60
Query: 286 ELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVH 345
EL F+SQ+E+K + + ++S +KRK +N +Q PAK++K P K
Sbjct: 61 ELMTFKSQEEAK-VEAYPNLNDNSNANDSSQKRKPSNN--KQQPPAKKRKENPPKSTMPS 117
Query: 346 DKEKRQVQN-----LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKG-------FTDECT 393
D + VQ+ + + G +++ V + + D+ G++ + D CT
Sbjct: 118 DDQGSNVQSGHSGAVTDVEVGGASREKVMASIEMKVDSDSRTGKSSSNEPKPSFYNDNCT 177
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
F+SNI+LKA +DLRRFFSD+GG ++IR+L D+FT KSRGLAYVDF+D++HL AA+ KN
Sbjct: 178 VFVSNIDLKANEDDLRRFFSDIGGATAIRLLRDRFTKKSRGLAYVDFLDNKHLEAAIKKN 237
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
KQ LGKK+SIARS+P S G+++ S +G +K + +
Sbjct: 238 KQKLLGKKVSIARSDP-----SKGKKSREAGQTSQDNLPPSGGDDAKATGSSGPDNEVPK 292
Query: 514 GDSVQLKGKNTFAVPRN-VRPLGFPAIKPKTEEGEDLKP--KSNDEFRKMFIKK 564
GD+ + GKNT PR V+PLG+ K E+ D+ KSN+EFR + +KK
Sbjct: 293 GDAKTI-GKNTLFAPRALVKPLGWTN---KDEKKPDVAGELKSNEEFRNLLLKK 342
>gi|307110537|gb|EFN58773.1| hypothetical protein CHLNCDRAFT_19664 [Chlorella variabilis]
Length = 565
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 161/262 (61%), Gaps = 12/262 (4%)
Query: 9 EEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLD 68
EE ++ + ++ YM Y+K E+ +GDPGR +YERA+ FPV+ LWL Y +YL+
Sbjct: 268 EESVAAGKPAGADLLAAYMAYVKVEERAGDPGRA--VYERAVAAFPVTHYLWLQYARYLE 325
Query: 69 KTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFE 128
LK+G+VV Y+RA +NCPWVG+LW R+L +LE+S A EE+ + +++++L ++E
Sbjct: 326 AHLKIGSVVNAAYARAVRNCPWVGQLWGRALRALEQSEAPEEQHAALYDRALAAGLQSYE 385
Query: 129 EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAY 187
+YL++ L R+D LRRR G +R F+RA+D L + D RL +Y
Sbjct: 386 DYLEVVLARLDCLRRR--------GAEALPKLRTAFRRAADLLHSYFPDHLDRTFRLTSY 437
Query: 188 WAHLEQSMGKDMVSARGVWERLLK-ISGAMLEAWQSYISMEIELDHINEARSIYKRCYSK 246
WA E +G D+ +ARGVWE LK ++G + W ++I E H EAR++YKRCYS+
Sbjct: 438 WADCEAGVGGDLAAARGVWEAALKGVAGRYADTWAAFIDFERRRGHTREARTLYKRCYSR 497
Query: 247 RFTGTGSEDICHAWLRFEREYG 268
R G +C AWLRFERE G
Sbjct: 498 RLEEGGQALLCDAWLRFEREEG 519
>gi|198421867|ref|XP_002121273.1| PREDICTED: similar to squamous cell carcinoma antigen recognised by
T cells 3 [Ciona intestinalis]
Length = 930
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 251/495 (50%), Gaps = 46/495 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
++S K ++Y Y+ +E S +P R+Q +YERAITD +++ LW+DY +YL TLK G +V
Sbjct: 274 AESPKTEEYNAYIDHEMKSNNPARIQCIYERAITDNCLNAQLWMDYLKYLTNTLKSGPIV 333
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
Y R+ +NCPWV +LWV +L+LER+ + ++ ++L FS+ EYL+L+
Sbjct: 334 LSAYKRSVRNCPWVAKLWVGLVLTLERNSEPQNKVEEGLNEALAVGFSSASEYLELWRCW 393
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
D +RR + E +++R F+RA+ +L ++ +N D ++ YWA++E
Sbjct: 394 CDYIRR----THEENPQEGMTVVRTEFKRATSHLLNEVLPGFSENADHDYTMWIYWANIE 449
Query: 193 QSMGKDMVSARGVWERLLKISGAML--EAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
+ + AR + E ++K A L + W+ Y +E + AR++ +
Sbjct: 450 ARGSQGIDEARKIMEEVMKHPDARLNWKIWEQYYHLERLHGDLTHARNVLRHAVQSSAAD 509
Query: 251 TGS-EDICHAWLRFEREYGTLEDFDHSVQKVTPRL-------EELRLFRSQQESKSLPES 302
GS E C +RFERE G+L D D S++KV R+ E+L F +++ K +
Sbjct: 510 DGSAESACEFLIRFERENGSLSDLDESIKKVEGRMSKVIKRREKLVAFAEERQKKQGGKK 569
Query: 303 ADQKE---HSV-KKTGREKRKSD-SNISYEQSPAKRQKHAPQK----------PKKVHDK 347
D+ + HS KK R+ K + SN +++ +++ H+P K P+ V K
Sbjct: 570 FDKNKKPRHSPNKKENRQATKRNISNTEPQENIKRKRTHSPNKEGFKEPAGLPPRFV--K 627
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA-------FLSNI- 399
K + +A + KQ +E P+ + P + +DE TA F+SN+
Sbjct: 628 AKSPEKTIAPPPGYKPDKQQGQENEAPTPMSEDQPAQATITSDERTAEGDKHTVFISNMS 687
Query: 400 -NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFL 458
++++ E L+ F G V S+R++ D GK RG +V F E + A+ ++Q
Sbjct: 688 YSVQSPEEKLKIMFGCCGDVKSVRVVRD-HKGKMRGFGFVTFHQIEDVEKALNLDRQPLE 746
Query: 459 GKKLSIARSNPKQRK 473
G+ L ++R+ K +
Sbjct: 747 GRPLYVSRNTEKSNR 761
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S +N T E L++ FS+ G V S RI+ K GKS+G+A++++ ++ A AV K
Sbjct: 777 FVSGLNFATTEETLQKVFSEHGVVKSARIVVTK-GGKSKGIAFIEYENESDAAQAVMKMD 835
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
+ + G + +A SNP R SS Q + G+ G S+ + I S QS
Sbjct: 836 ETEMDGFTIKVAISNPPPRGRSSTMGKSLGQVERGTTVGSRGKGKSQVTLIPRSLQS 892
>gi|159471914|ref|XP_001694101.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277268|gb|EDP03037.1| predicted protein [Chlamydomonas reinhardtii]
Length = 686
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/460 (30%), Positives = 220/460 (47%), Gaps = 74/460 (16%)
Query: 5 RAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYT 64
RA E ++ +D K ++ Y+K EQ++GD RVQ +YERA+ FP++ LWL Y
Sbjct: 265 RAGCEAAVAADQPADVAKLGAFLSYIKLEQNAGDADRVQTVYERAVAAFPLTHSLWLQYG 324
Query: 65 QYLDKTLKVGNVVRD----VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
QY++ T G + +D VY RAT+NC WVG +W R L +L+R+ A+ E + +E++L
Sbjct: 325 QYME-TAAAGKLPKDKVNAVYERATRNCAWVGAVWERCLRALDRTGAAPELLQETYERAL 383
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG 180
+ E+Y+ + L R+D LR R L +D S
Sbjct: 384 AAGLQSAEDYMAVVLARLDALRHRALLMSHFPDYVDRS---------------------- 421
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKIS-GAMLEAWQSYISMEIELDHINEARSI 239
LRL YWA E+ + D+ +AR VWE +K G E W++YI++E E R++
Sbjct: 422 -LRLPGYWAACEEHVLGDVAAAREVWEGAIKGGMGRFAEVWEAYIALERSARRTKEVRAL 480
Query: 240 YKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSL 299
YKRCYS+ F G + HAWLRFERE G+ +D+ ++ K +++ ++ S++E K++
Sbjct: 481 YKRCYSRAFEEDGQLRLSHAWLRFEREEGSADDYLAALLKAA--VQKAKVL-SKEEMKAM 537
Query: 300 PESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEEN 359
++A D N E++ K +K + K+V + +E
Sbjct: 538 RQAA-----------------DPNFDPEKAKEKEKKKGAKSTKRVRSE---------DEG 571
Query: 360 EGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFF--SDVGG 417
+G T EE A P TK T F+ + E L F S G
Sbjct: 572 DGAITSGDAEE---------AAPASTKR-----TVFIKGLRPAVKDEQLDEFLKKSVPDG 617
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMF 457
+ +RI+ D T ++RG AYV+ E L V+ N F
Sbjct: 618 IKDVRIIRDAATRQARGFAYVECASREALDKLVSLNSTPF 657
>gi|384252965|gb|EIE26440.1| hypothetical protein COCSUDRAFT_46087 [Coccomyxa subellipsoidea
C-169]
Length = 793
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 160/280 (57%), Gaps = 11/280 (3%)
Query: 5 RAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYT 64
+AH EE ++ +D+E YM Y+ E++ GDPGRV +LYERAI FPV+ LWL +
Sbjct: 162 QAH-EEAVAPGKEADTELLAAYMAYINLEEAQGDPGRVTVLYERAIAVFPVTHYLWLQFA 220
Query: 65 QYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAF 124
+YL+ +K+ +VVR VY RA +NCPW+G LW R L +LER A +EE + K+L
Sbjct: 221 RYLETHIKIPSVVRSVYERAVRNCPWIGSLWARGLRALERGVAPDEEHAAFHAKALQAGL 280
Query: 125 STFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLR 183
+ +YL++ L RID LRR+ G Y RE FQ A + L + D L+
Sbjct: 281 QSPGDYLEVQLARIDCLRRK--------GQEAYGKTREAFQAAQELLGVYFPDWMDRTLQ 332
Query: 184 LYAYWAHLEQSMGKDMVSARGVWERLLK-ISGAMLEAWQSYISMEIELDHINEARSIYKR 242
L +Y A +G+ + AR VW LK +G +E W ++I+ E +I +AR++YKR
Sbjct: 333 LTSYRADTALRLGRGIEEARDVWNAALKSPAGRYVETWVAFIAAETAEQNIPQARALYKR 392
Query: 243 CYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTP 282
S++ G +C AW+RFERE+G+ ++ KV P
Sbjct: 393 ASSRKLEEGGQAVLCDAWVRFEREHGSADEQLQVELKVEP 432
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 359 NEGRETKQTVEE--QPKKQPIKDAVPGRT--------KGFTDECTAFLSNINLKATYEDL 408
N ET T+ E P +QP + G + + + D CTAFL N+ K E+L
Sbjct: 570 NAINETGDTLAETSAPPQQPQANGGEGPSGRPSAAERQFYRDNCTAFLKNLPFKTEKEEL 629
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSN 468
+FF + GG GLAYVDF D L AVAKN F G+ LSI S
Sbjct: 630 EKFFEECGGAK-------------EGLAYVDFPDKATLEKAVAKNGADFQGRPLSIEVSR 676
Query: 469 P 469
P
Sbjct: 677 P 677
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 247/486 (50%), Gaps = 23/486 (4%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R EE+I ++ E Y +YL YEQ +GDPGR+ +LYERAITD + +WLD
Sbjct: 274 NLRLPYEERIVSAQ-TEEELLDSYKMYLSYEQQNGDPGRITVLYERAITDLSLEMSIWLD 332
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y +YL++ +K+ +V+ VY RAT+N PW ++W + + S E+ S E+ T+ E +L
Sbjct: 333 YLKYLEENIKIESVLDQVYQRATRNVPWCAKIWQKWIKSYEKWDKSVLEVQTLLENALTT 392
Query: 123 AFSTFEEYLDLFLTRIDGLRRRI-LFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDG 180
FST EEY +L++T ++ LRRR+ S + + L+ ++R TF RA ++L++ + D
Sbjct: 393 GFSTAEEYRNLWMTYLEYLRRRLDRCSSDEKKQLE--VLRNTFNRACEHLAKSFGLDGDP 450
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEA-WQSYISMEIELDHINEARSI 239
+ YWA E +M AR +W +L + + W YIS+E R +
Sbjct: 451 NCIILQYWARTEAIHANNMEKARSLWADILSQGHSTTASYWLEYISLERCYGDTKHLRKL 510
Query: 240 YKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQ-QESKS 298
+++ S E I ++W+ FER+ GTLE + + +L+++ R + Q+ +
Sbjct: 511 FQKALS--LVKDWPESIANSWIDFERDEGTLEQMELCEIRTKEKLDKVAEERQKTQQISN 568
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVH-DKEKRQVQNLAE 357
L S Q + + K+ ++ K + +Y K + H K ++ H + EK+ ++ E
Sbjct: 569 LELSPSQNKKAYKRKQKDTGKWKNLGAYPIKIMKVETHLKPKIRESHLNFEKKDDVDIEE 628
Query: 358 ENEGRETKQTVEEQPKKQPIKDAVPG------------RTKGFTDECTAFLSNINLKATY 405
E TK + ++ K+P PG D+ + F+SN++ A+
Sbjct: 629 EEIADVTKTKLMKKVLKEPNIPPPPGFKAPESEQMEIDYVHEVDDKISVFISNLDYSASE 688
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
E++R G ++ ++++ + G+S+G YV E + A+ ++ G+ + ++
Sbjct: 689 EEVRNALKPAGPITMVKMIRS-YNGRSKGYCYVQLTSKEAVDKALELDRVPIRGRPMFVS 747
Query: 466 RSNPKQ 471
R +P +
Sbjct: 748 RCDPNK 753
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + + T EDL F G + +RI+ + G S+GLAYV+F+D+ A+
Sbjct: 772 FVKGLPVSTTKEDLEEIFKVHGSLKEVRIVTYR-NGHSKGLAYVEFVDENSAGKALLAID 830
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M +G K +S+A S P +RK
Sbjct: 831 GMKIGDKIISVAISQPPERK 850
>gi|307180328|gb|EFN68361.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Camponotus
floridanus]
Length = 903
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 234/470 (49%), Gaps = 23/470 (4%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVR 78
++E Y YL YE+ DPGR+ +LYERA+TD + +WLDY YL+ T+K+ +V+
Sbjct: 286 ENELLDAYKGYLLYEKQRPDPGRITVLYERAVTDLSLEESIWLDYLTYLEDTIKIESVLD 345
Query: 79 DVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRI 138
VY RA++N PW ++W + + S E+ E+ + E +L FS E+Y +L++T +
Sbjct: 346 PVYQRASRNIPWCSKIWQKWIRSYEKWERPILEVQKLLENALSNGFSIAEDYRNLWITYL 405
Query: 139 DGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGLLRLYAYWAHLEQSMGK 197
+ LRRRI + E +IR TF +A ++L++ + D + YWA E
Sbjct: 406 EYLRRRIERCSDEEKEKHLDVIRNTFNKACEHLAKYFGLDGDPNCIILQYWARTEAIHAN 465
Query: 198 DMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDI 256
+M AR +W +L + A + W YIS+E R +Y++ S T E I
Sbjct: 466 NMEKARTLWADILSQGHSATVSFWLEYISLEKCYGDTKHLRKLYQKALSS--TKDWPESI 523
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGRE 316
AW+ FER+ GTLE + K +L +++ +E + ++ Q E S +
Sbjct: 524 ITAWIDFERDEGTLEQMELCEAKTKEKLNKVK-----EERQKAQQALSQDESSTQNKKAN 578
Query: 317 KRKSDSNISYEQ---SPAKRQKHAPQKPKKVHDK----EKRQVQNLAEENEGRETKQTVE 369
KRK++ ++ SP+K K Q K+ + + ++ N +E E++ +
Sbjct: 579 KRKANEIGRWQTLGASPSKLIKTDVQTKPKLRESRLNFDAKETNNRNQE----ESRSDIA 634
Query: 370 EQPKKQPIK--DAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDK 427
P + K DA + + T F+SN++ AT +++R VG ++ +++ D
Sbjct: 635 PPPGYKTTKDNDAEDKNSHEVNNNITVFVSNLDYTATEDEVRDILQSVGPITLFKMIKD- 693
Query: 428 FTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
+ G+S+G YV + E + A+ ++ G+ + ++R +P + SSG
Sbjct: 694 YKGRSKGYCYVQLSNAEAVEEALKLDRTPLKGRPMFVSRCDPNKGTRSSG 743
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 238/481 (49%), Gaps = 23/481 (4%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R EE+I +++E Y IYL YEQ +GDPGR+ +LYERAITD + +WLD
Sbjct: 277 NLRLPYEEKIVSAQ-TENELLDSYKIYLSYEQRNGDPGRITVLYERAITDLSLEMSIWLD 335
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y +YL++ +K+ +V+ VY RA +N PW ++W + + S E+ S E+ T+ E +L
Sbjct: 336 YLKYLEENIKIESVLDQVYQRALRNVPWCAKIWQKWIRSYEKWNKSVLEVQTLLENALAA 395
Query: 123 AFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGL 181
FST E+Y +L++T ++ LRR+I EG ++R TF RA ++L++ D
Sbjct: 396 GFSTAEDYRNLWITYLEYLRRKIDRYSTDEGK-QLEILRNTFNRACEHLAKSFGLEGDPN 454
Query: 182 LRLYAYWAHLEQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIY 240
+ YWA E +M AR +W + + W YIS+E R ++
Sbjct: 455 CIILQYWARTEAIHANNMEKARSLWADIFSQGHSGTASYWLEYISLERCYGDTKHLRKLF 514
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
++ + E I ++W+ FER+ GTLE + + +L+++ +E + +
Sbjct: 515 QKALT--MVKDWPESIANSWIDFERDEGTLEQMEICEIRTKEKLDKV-----AEERQKVQ 567
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQ----NLA 356
+ ++ + ++ KRK D E K +P K KV + K +++ NL
Sbjct: 568 QMSNHELSPLQNKKTLKRKQD-----ETGKWKNLGSSPTKITKVETQIKPKIRESRLNLE 622
Query: 357 EENEGRETKQTVEEQPK-KQPIKDAVP-GRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ + E K P K P + + D+ T F+SN++ A+ E++R
Sbjct: 623 KNADSEEQKLKTAPPPGFKMPENEQMEIDNMHEMDDKSTVFISNLDYTASEEEVRNALQP 682
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKD 474
G ++ +++ D + G+S+G YV + E + A+ ++ G+ + +++ +P + +
Sbjct: 683 AGPITMFKMIRD-YKGRSKGYCYVQLSNIEAIDKALQLDRTPIRGRPMFVSKCDPNRTRG 741
Query: 475 S 475
S
Sbjct: 742 S 742
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 47/198 (23%)
Query: 382 PGRTKG--FTDECTA-----FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRG 434
P RT+G F C+ F+ + + T E+L F G + +RI+ + G S+G
Sbjct: 736 PNRTRGSGFKYSCSLEKNKLFVKGLPVSTTKEELEEIFKVHGALKEVRIVTYR-NGHSKG 794
Query: 435 LAYVDFIDDEHLAAAVAKNKQMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGN 493
LAYV+F+D+ A A+ M + K +S+A S P +RK E+ + G
Sbjct: 795 LAYVEFMDENSAAKALLATDGMKIADKVISVAISQPPERKK-------VEEPLLVKSLG- 846
Query: 494 AGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEE------GE 547
GT+ S + TF +P+ + + +K G
Sbjct: 847 -GTTVS----------------------RTTFGMPKTLLSMVPRTVKTAATNGSANVPGN 883
Query: 548 DLKPK-SNDEFRKMFIKK 564
+ PK SN +FR M + K
Sbjct: 884 GVAPKMSNQDFRNMLLNK 901
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 240/483 (49%), Gaps = 25/483 (5%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R EE+I+ +++E Y YL YE+ +GDPGRV +LYERAI+D + LWLD
Sbjct: 275 NGRLPFEEKIASSQ-AENELLDSYKAYLLYEKQNGDPGRVTVLYERAISDISLEMSLWLD 333
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y YL++ +K+ +V+ +Y RA++N PW ++W + + + E+ EI T+ E L
Sbjct: 334 YLTYLEENIKIESVLDQIYRRASRNVPWCAKVWQKWMRAYEKWGKPTLEIQTLLENGLEA 393
Query: 123 AFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGL 181
FS ++Y +L++T ++ LRR+I + E ++R TF RA ++L++ D
Sbjct: 394 GFSMADDYRNLWITYLEYLRRKIDRDYDEEEK-QIEILRNTFNRACEHLAKYFGLEGDPN 452
Query: 182 LRLYAYWAHLEQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIY 240
+ YWA E +M AR +W +L + A W YIS+E R +Y
Sbjct: 453 CVILQYWARTEAIHANNMEKARSLWADILSQGHSATASYWLEYISLERCYGDTKHLRKLY 512
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
++ ++ E I ++WL FER+ G+LE + + +L+++ +E +
Sbjct: 513 QKAFTS--VKDWPESIANSWLDFERDEGSLEQMEFCESRTREKLDKV-----AEERQKAQ 565
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQ---SPAKRQK-HAPQKPKKVHDKEKRQVQNLA 356
++++ + ++ KRK+D ++ SPAK K KPK K NL
Sbjct: 566 QTSNHESSPLQNKKAHKRKTDDTGKWKNLSSSPAKITKVETHMKPKAKEGK-----LNLE 620
Query: 357 EENEGRETKQTVEEQPK---KQPIKDAVP-GRTKGFTDECTAFLSNINLKATYEDLRRFF 412
+ +G +Q ++ P K P D + D+ T F+SN++ AT E++R
Sbjct: 621 TKLDGDTQEQKLKVAPPPGFKMPEDDKMEIDHAHEVDDKITVFISNLDYTATEEEVRNAL 680
Query: 413 SDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
G ++ +++ D + G+S+G YV E + A+ ++ G+ + ++R +P +
Sbjct: 681 EPAGPITLFKMIRD-YKGRSKGYCYVQLSSAEAVEKALQLDRTPIRGRPMFVSRCDPNRT 739
Query: 473 KDS 475
+ S
Sbjct: 740 RGS 742
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 44/198 (22%)
Query: 382 PGRTKG--FTDECTA-----FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRG 434
P RT+G F C+ F+ + + T E+L F G + +RI+ + G S+G
Sbjct: 736 PNRTRGSGFKYSCSLEKNKLFVKGLPVTTTKEELEEIFKVHGTLKEVRIVTYR-NGHSKG 794
Query: 435 LAYVDFIDDEHLAAAVAKNKQMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGN 493
LAYV++ D+ A A+ M + K +S+A S P +RK + TE+ + G
Sbjct: 795 LAYVEYDDENSAAKALLATDGMKVSDKVISVAISQPPERK----KNPVTEETTLVKSLG- 849
Query: 494 AGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGE-----D 548
GT+ S + TF +P+ + + +K T G +
Sbjct: 850 -GTAVS----------------------RTTFGMPKTLLSMVPRTVKAATSNGSANVTGN 886
Query: 549 LKPK--SNDEFRKMFIKK 564
P+ SN +FR M + K
Sbjct: 887 GVPQKMSNQDFRNMLLNK 904
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 237/481 (49%), Gaps = 23/481 (4%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R EE+I +++E Y IYL YEQ +GDPGR+ +LYERAITD + +WLD
Sbjct: 282 NLRLPYEEKIVSAQ-TENELLDSYKIYLSYEQRNGDPGRITVLYERAITDLSLEMSIWLD 340
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y +YL++ +K+ +V+ VY RA +N PW ++W + + S E+ S E+ T+ E +L
Sbjct: 341 YLKYLEENIKIESVLDQVYQRALRNVPWCAKIWQKWIRSYEKWNKSVLEVQTLLENALAA 400
Query: 123 AFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGL 181
FST E+Y +L++T ++ LRR+I EG ++R TF RA ++L++ D
Sbjct: 401 GFSTAEDYRNLWITYLEYLRRKIDRYSTDEGK-QLEILRNTFNRACEHLAKSFGLEGDPN 459
Query: 182 LRLYAYWAHLEQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIY 240
+ YWA E +M R +W +L + W YIS+E R ++
Sbjct: 460 CIILQYWARTEAIHANNMEKTRSLWADILSQGHSGTASYWLEYISLERCYGDTKHLRKLF 519
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
++ + E I ++W+ FER+ GTLE + + +L+++ +E + +
Sbjct: 520 QKALT--MVKDWPESIANSWIDFERDEGTLEQMEICEIRTKEKLDKV-----AEERQKMQ 572
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQ----NLA 356
+ ++ + ++ KRK D E K +P K KV + K +++ N
Sbjct: 573 QMSNHELSPLQNKKTLKRKQD-----ETGKWKNLGSSPTKITKVEMQIKPKIRESRLNFE 627
Query: 357 EENEGRETKQTVEEQPK-KQPIKDAVP-GRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ + E K P K P + + D+ T F+SN++ A+ E++R
Sbjct: 628 KNADSEEQKLKTAPPPGFKMPENEQMEIDNMNEMDDKSTVFISNLDYTASEEEVRNALQP 687
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKD 474
G ++ +++ D + G+S+G YV + E + A+ ++ G+ + +++ +P + +
Sbjct: 688 AGPITMFKMIRD-YKGRSKGYCYVQLSNIEAIDKALQLDRTPIRGRPMFVSKCDPNRTRG 746
Query: 475 S 475
S
Sbjct: 747 S 747
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 382 PGRTKG--FTDECTA-----FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRG 434
P RT+G F C+ F+ + + T EDL F G + +RI+ + G S+G
Sbjct: 741 PNRTRGSGFKYSCSLEKNKLFVKGLPVSTTKEDLEEIFKVHGALKEVRIVTYR-NGHSKG 799
Query: 435 LAYVDFIDDEHLAAAVAKNKQMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGN 493
LAY++F D+ A A+ M + K +S+A S P +RK TE+ + G
Sbjct: 800 LAYIEFKDENSAAKALLATDGMKIADKIISVAISQPPERKKVPA----TEEPLLVKSLG- 854
Query: 494 AGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEE------GE 547
GT+ S + TF +P+ + + +K G
Sbjct: 855 -GTTVS----------------------RTTFGMPKTLLSMVPRTVKTAATNGSANVPGN 891
Query: 548 DLKPKSNDE-FRKMFIKK 564
+ PK N++ FR M + K
Sbjct: 892 GVAPKMNNQDFRNMLLNK 909
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 245/486 (50%), Gaps = 23/486 (4%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R EE+I ++ E Y +YL YEQ +GDPGR+ +LYERAITD + +WLD
Sbjct: 274 NLRLPYEEKIVSAQ-TEEELLDSYKMYLSYEQQNGDPGRITVLYERAITDLSLEMSIWLD 332
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y +YL++ +K+ +V+ VY RAT+N PW ++W + + S E+ S E+ T+ E +L
Sbjct: 333 YLKYLEENIKIESVLDQVYQRATRNVPWCAKIWQKWIKSYEKWDKSILEVQTLLENALTT 392
Query: 123 AFSTFEEYLDLFLTRIDGLRRRI-LFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDG 180
FST EEY +L++T ++ LRRR+ S + + LD ++R F RA ++L++ + D
Sbjct: 393 GFSTAEEYRNLWMTYLEYLRRRLDRCSSDEKKQLD--ILRYAFNRACEHLAKSFGLDGDP 450
Query: 181 LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEA-WQSYISMEIELDHINEARSI 239
+ YWA E +M AR +W +L + + W YIS+E R +
Sbjct: 451 NCIILQYWARTEAIHANNMEKARSLWADILSQGHSTTASYWLEYISLERCYGDTKHLRKL 510
Query: 240 YKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQ-QESKS 298
+++ S E I ++W+ FER+ GTLE + + +L+++ R + Q+ +
Sbjct: 511 FQKALSS--VKDWPESIANSWIDFERDEGTLEQMELCEIRTKEKLDKVVEERQKTQQISN 568
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVH-DKEKRQVQNLAE 357
L S Q + + K+ ++ K + +Y K + K ++ H + EK+ ++ E
Sbjct: 569 LELSPSQNKKAYKRKQKDTGKWKNLGAYPIKIMKVETQLKPKIRESHLNFEKKDDVDIEE 628
Query: 358 ENEGRETKQTVEEQPKKQPIKDAVPG------------RTKGFTDECTAFLSNINLKATY 405
+ +K + ++ K+P PG D+ + F+SN++ T
Sbjct: 629 KEIAEVSKTKLMKKILKEPNIPPPPGFKAPESEQMEIDYVHEVDDKISVFISNLDYSVTE 688
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
E++R + G ++ ++++ + G+S+G YV E + A+ ++ G+ + ++
Sbjct: 689 EEVRNALNPAGPITMLKMIRS-YNGRSKGYCYVQLNSKEAVDKALELDRVPIRGRPMFVS 747
Query: 466 RSNPKQ 471
R +P +
Sbjct: 748 RCDPNK 753
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + + T EDL F G + +RI+ + G S+GLAYV+F+D+ A+
Sbjct: 772 FVKGLPVTTTKEDLEEIFKVHGSLKEVRIVTYR-NGHSKGLAYVEFVDENSAGKALLAID 830
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M +G K +S+A S P +RK
Sbjct: 831 GMKIGDKIISVAISQPPERK 850
>gi|260827026|ref|XP_002608466.1| hypothetical protein BRAFLDRAFT_283159 [Branchiostoma floridae]
gi|229293817|gb|EEN64476.1| hypothetical protein BRAFLDRAFT_283159 [Branchiostoma floridae]
Length = 925
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 237/483 (49%), Gaps = 32/483 (6%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+ + + Q+Y+ Y+ YE + +P R+Q ++ERA+ + P+ +LW YT YLD L++ ++V
Sbjct: 260 ATAPRLQEYLAYIDYELAEDEPTRIQCIFERALQENPLVVELWTKYTHYLDTKLRIPHIV 319
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RAT+NCPW LW LL+LER R +E+I V + +L F +Y+ L+ T
Sbjct: 320 LSAHERATRNCPWAAILWQGYLLALERHRQPKEKIKEVMDTALPAGFPQASDYVSLWQTY 379
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-----NTDGLLRLYAYWAHLE 192
D RRR+ ++ + E +R T+Q+A DY + ++ D L WA LE
Sbjct: 380 CDYHRRRVDWTKDAESS-GIDALRSTYQQAVDYCRDSLQQYFGETGDPQCTLQRTWARLE 438
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
K+M AR +W+ ++ + G + W Y +E + +R + ++ SK
Sbjct: 439 AKYNKNMGKARELWDGIMAEGHGREAQMWLEYAELERSYGDVERSRKVLQKAVSK--ASD 496
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPES-ADQKEHSV 310
E +C A + FERE GTLE +D++V + +L+ ++ R++Q K L + A++++
Sbjct: 497 WPESVCEALINFEREEGTLETYDNTVARCEAQLKRVQERRAKQAEKELVAAQAEEQKAEA 556
Query: 311 KKTGREKRKSDSNISYEQSPAKRQK-------HAPQKPKKVHDKEKRQVQNLAEEN--EG 361
+K R ++KS +Q ++ + AP++P K + + L + N E
Sbjct: 557 RKKNRAEKKSAKKQEMKQGQKRKVECLDEEGFKAPEEPPVKRVKGQCHLSQLLKGNSDEP 616
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFT------DECTAFLSNI--NLKATYEDLRRFFS 413
E + Q + VP T + + F+SN+ +L + +R FS
Sbjct: 617 EEVPFSAAWQSIHEATIPPVPSSTGDVPVHDPDRERRSVFVSNLSYSLHNPQDKMREVFS 676
Query: 414 DVGGVSSIRILHDKFTGKS--RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
+ G V+ +R+ FT K RG YV+F ++ A+ + + G+ L ++ K+
Sbjct: 677 ECGEVADVRL---AFTSKKKFRGFCYVEFKEESAAVKALGFDHKEVEGRPLFVSPCIDKR 733
Query: 472 RKD 474
+ D
Sbjct: 734 KGD 736
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+SN+ T E L F G + +R++ + +GK +GLAYV++ D++ + AV K
Sbjct: 753 FVSNLPYTVTKEALENIFKQHGPLRGVRMVTYR-SGKPKGLAYVEYEDEQTASQAVLKTD 811
Query: 455 QMFLG-KKLSIARSNPKQRK 473
+ +G +K+ +A SNP R+
Sbjct: 812 GLMIGDRKIQVAVSNPPTRR 831
>gi|302844189|ref|XP_002953635.1| hypothetical protein VOLCADRAFT_118442 [Volvox carteri f.
nagariensis]
gi|300261044|gb|EFJ45259.1| hypothetical protein VOLCADRAFT_118442 [Volvox carteri f.
nagariensis]
Length = 1050
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 168/345 (48%), Gaps = 63/345 (18%)
Query: 5 RAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYT 64
RA EE ++ + +D K ++ Y+K EQ++GD RVQ+LYERA+ FP++ LWL Y
Sbjct: 287 RAGFEEGVAAEVPADVSKLGAFLSYIKMEQNAGDTARVQVLYERAVAAFPLTYSLWLQYG 346
Query: 65 QYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLL--- 121
QY++ K+ + VY RA +NCPWV +W R++ +L+R+ A E + ++ +L
Sbjct: 347 QYMETHTKLAGPINAVYGRAVRNCPWVAAVWERAIRALDRTGAPLEAVDEMYGNALKAGL 406
Query: 122 --------CAFS--------------------------TFEEYLDLFLTRIDGLRRRILF 147
C+ S ++YL + L+RID LRR +
Sbjct: 407 QHSTPQSGCSSSNRCRPLILPILTVGLRTRFPYRVPKQAPDDYLAIILSRIDCLRRAAVA 466
Query: 148 SGEVEGVLD------------------------YSLIRETFQRASDYLSEQMKN-TDGLL 182
+ E +S +R F A++ + + D L
Sbjct: 467 AKEAAAAGGGSGTGGGGSSKKEAAAAAAAVAAAFSRLRLAFCSATELMMSHFPDHLDLSL 526
Query: 183 RLYAYWAHLEQSMGKDMVSARGVWERLLKIS-GAMLEAWQSYISMEIELDHINEARSIYK 241
L AYWA E + D +AR VWE LK G EAW++YI+ME I EAR++YK
Sbjct: 527 SLPAYWAQCEMYVMCDTAAAREVWEGSLKGGLGRYAEAWEAYIAMERSARLIKEARALYK 586
Query: 242 RCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEE 286
RCYS+R G +C AWLRFERE G +D+ ++ KV P LEE
Sbjct: 587 RCYSRRLEQDGQLKLCQAWLRFEREEGRADDYLQALLKVEPILEE 631
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSD--VGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
+TD+ T F+ + DL F G+ RI+ D TG +RG AYV+ E
Sbjct: 808 YTDKMTVFIRGLLPGVKDVDLEGFLKGHVPEGLKDSRIMRDAQTGDARGFAYVECSSREA 867
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQ 471
L VA N +F GK L IA S P +
Sbjct: 868 LDKLVALNGTVFQGKSLFIAESKPPK 893
>gi|443682493|gb|ELT87074.1| hypothetical protein CAPTEDRAFT_222846 [Capitella teleta]
Length = 841
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 229/489 (46%), Gaps = 60/489 (12%)
Query: 13 SRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLK 72
S+ S+S ++Y+ Y+ +E S +P RV LYERAI D +++++W+ YT+YLD LK
Sbjct: 218 SKLSSSESPHLEEYLTYIDHEVSKNEPQRVLCLYERAIQDNCLNAEVWIKYTKYLDSVLK 277
Query: 73 VGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLD 132
+ D Y RA +NCPW LW+ + ER + ++I+ +F K+L F++ EYL
Sbjct: 278 AKSQAFDTYERAVRNCPWSCALWLGYCRAAERLQLPHDQITDLFTKALGSGFASGAEYLQ 337
Query: 133 LFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLE 192
L++ + + RRI D+ S ++ D L YWA +E
Sbjct: 338 LWMGNLHYMHRRI-----------------------DWHSAFPEDGDPTFSLLKYWARVE 374
Query: 193 QSMGKDMVSARGVWERLLKIS-GAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+M AR +W+++++ G+ E W Y+ +E R ++ C +
Sbjct: 375 ARFCHNMPKAREIWKKVMQSGVGSQAEFWLEYVELERAYGDHKHGRKVF--CQAINSVTD 432
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESK-----------SLP 300
E IC A+LR+E E G+LED+D + + ++E ++ R + E K + P
Sbjct: 433 WPESICEAFLRYESEEGSLEDYDEAAVRCDAQMERIKERRLKAEEKEKTQPKKGKMGNKP 492
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHA-----------PQKPKKVHDKEK 349
+ + EHS KK G+ + ++ P ++K A P P K
Sbjct: 493 KGKNPVEHSPKK-GKPQPPVNAKQGKLAPPPSQKKTAKDSTPSEEFKVPTMPPKTSIAPP 551
Query: 350 RQVQNLAEENEG-----RETKQTVEEQP--KKQPIKDAVPGRTKGFT---DECTAFLSNI 399
+ E G ET +++P KKQ + +AV + + D AF+SN+
Sbjct: 552 PGFKRKVEPPPGFKPPKEETGDGGDDEPAAKKQKVSEAVEDQAPIYDSSHDNRKAFVSNL 611
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
+ + L+ FS +G V ++R++ + F G+S+G AY++F D+ A+ ++ M
Sbjct: 612 SYDVDEQRLQEIFSKLGEVINVRLVTN-FKGQSKGFAYIEFKDELLAQKALTLDRMMVNN 670
Query: 460 KKLSIARSN 468
+ + ++ N
Sbjct: 671 RPMFVSECN 679
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + + + F G + +R++ + G S+GLAYV+F+ + A AV K
Sbjct: 700 FVKGLPRTTGRDAVENIFKQYGAIKDVRLVTYR-NGVSKGLAYVEFVSESEAAQAVMKAD 758
Query: 455 QMFLG-KKLSIARSNPKQRKDS 475
+ +G ++S+A SNP +R+ S
Sbjct: 759 GLMVGDHEISVAISNPPERQQS 780
>gi|196016887|ref|XP_002118293.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
gi|190579124|gb|EDV19227.1| hypothetical protein TRIADDRAFT_62320 [Trichoplax adhaerens]
Length = 930
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 239/472 (50%), Gaps = 30/472 (6%)
Query: 8 LEEQISRQD--LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQ 65
L++++ +D LS Y Y+++E+++ +P R+Q LYER++ + +S +LW YTQ
Sbjct: 312 LDQRMQYEDSLLSVESTLDGYKNYIEFEKTTNEPARIQCLYERSLRNHCLSPELWQSYTQ 371
Query: 66 YLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFS 125
YLD LKV ++ VY RA +NCPWV LW L + ER+ E++ +L C
Sbjct: 372 YLDTKLKVWSIAVQVYERAIRNCPWVAALWHGYLRAQERAGGPIEKMRDTVTTALNCNLG 431
Query: 126 TFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLY 185
+ E L L+L ID LRR I G E + +L+R+TFQ A +++ + + + + L
Sbjct: 432 SMENDLSLWLIYIDRLRRNIKPGG--EDSEEITLLRDTFQAALNHIYNRYETVESIDYLQ 489
Query: 186 AYWAHLEQSMGKDMVSARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRC 243
YWA +E ++ R + E LL I G +A W YI +E I + ++ R
Sbjct: 490 KYWAKIEARHFNNIEKCRQLREELLNI-GHKRQASYWIEYIELERAYGDIQNCQKLFSR- 547
Query: 244 YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESA 303
+ R E IC AWL FERE G L D+D + K +L+ + SQ+ +K++ + A
Sbjct: 548 -AIRAVNDDPEGICQAWLDFEREEGQLSDWDIANAKCQDQLQVI----SQKRAKAVEKEA 602
Query: 304 DQKEHSVKKTGREKRKSDSNISYEQSPAKRQK---HAPQKPKKVHDKEKRQVQNLAEENE 360
++K+ ++ R K + N Q+ A+R + AP + K+ D + R+ E
Sbjct: 603 EEKKKRKEEKERSKMQDRINRKLAQTVAERNQIDADAPSREKRKFDFDSRK--------E 654
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
TK++ + P ++ + + ++ + F+SN+ A +D+R FFS G V
Sbjct: 655 SGITKKSRTDGSLNNPSRE-----RERYNEKTSVFISNVPFSAVEDDIRSFFSTCGNVKD 709
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
+R++ GK +G YV+F D+ A+ ++ G+ + ++ + K +
Sbjct: 710 VRLVRAP-NGKFKGYGYVEFEDELVTQEALKLDRNTIAGRPVYVSENVDKSK 760
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D CT F+ N + + LR F+ G+ IR + K +G+SRG AY++F ++ A A
Sbjct: 772 DRCTLFVKNTK-DISSDRLREVFNQFEGLRDIRCVARK-SGRSRGFAYIEFSNEASAANA 829
Query: 450 VAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
V + G +S+A SNP ++ S E+ + + ++ N TS +
Sbjct: 830 VKTLDNTEIDGVTISVAISNPDAKETSEFEKNRKPEIRERNESKNRSTSDVPTVT----- 884
Query: 509 QSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
SRGRG + +F VPR+V+ SND+FRKM K
Sbjct: 885 -SRGRG-----RTGLSFMVPRSVKK---NDSTTSESSNNSSSKLSNDDFRKMLTK 930
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 228/483 (47%), Gaps = 26/483 (5%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R EE+I + + +E+ Y YL +E+ GDP RV LLYERAITD + LW D
Sbjct: 282 NERIPFEEKIESIE-NKNERLDAYKAYLTHEKKIGDPARVALLYERAITDISLEPTLWTD 340
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
Y Y++ +K+ ++ +Y RA +N PW ++W + E+ + ++ + E +
Sbjct: 341 YIHYVETNIKIDDITEKIYVRAMRNVPWCAKVWQNWIRFYEKKNSPLTDVQKLIESAFAV 400
Query: 123 AFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLL 182
FST EEY +++++ ++ LRRRI S + + L+ ++ F RA D+L+ D
Sbjct: 401 GFSTAEEYRNVWMSYLEYLRRRIDKSEDEKKNLE--ILENAFNRACDHLASFGIEGDPSC 458
Query: 183 RLYAYWAHLEQSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYK 241
+ +WA E DM AR +W ++ + +W YIS+E R +++
Sbjct: 459 EILQFWARTEAIHVNDMEKARSLWSDIMSQGHSESATSWLEYISLERCYGDTKHLRKLFQ 518
Query: 242 RCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPE 301
+ + E I +AW+ FER+ GTLE + KV RLE++ R + + S
Sbjct: 519 KALTS--VKDWPESIANAWINFERDEGTLEQMEICETKVKERLEKVAEERQKSQQYS--- 573
Query: 302 SADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEG 361
+A ++ S KK G+ K ++D+ S K K + PK + + ++ +E
Sbjct: 574 NAHEEVPSSKKAGKRKIEADAKWKKLGSSTKIAK-MDKSPKPIIRESTLKLDKKKPTSES 632
Query: 362 RET-KQTVEEQPKKQPIKDAVP--------------GRTKGFTDECTAFLSNINLKATYE 406
+ K V P + K A P + T F+SN++ AT E
Sbjct: 633 KNNLKPKVAPPPGYEESKVAPPPGYEEADEKMEEDMNNLQEADPNITVFVSNLDYTATEE 692
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIAR 466
++R + + S R++ D F G+S+G YV +E + A+ ++ G+ + I+R
Sbjct: 693 EVREALKPIWPIISFRMVKD-FKGRSKGFCYVSLSSEEAVNEALKLDRTRINGRPMFISR 751
Query: 467 SNP 469
+P
Sbjct: 752 CDP 754
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 24/172 (13%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA--VAK 452
F+ ++ T EDL F G + +RI+ + G S+GLAYV+F DDE+ AA VA
Sbjct: 775 FVKGLSPTTTKEDLENIFRVHGSLKDVRIVTYR-NGHSKGLAYVEF-DDENCAAKALVAT 832
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRG 512
+ K +++A S P QRK G T+++ + + G + TS S + +T
Sbjct: 833 DGMTIADKVINVAISQPPQRKHLPG----TDESNTVKSLGGSTTSRSHFGNPKTILS--- 885
Query: 513 RGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
VPR V + L+P SN +FR M +KK
Sbjct: 886 -------------MVPRTVIKNVTNNKSAEISGNGVLQPLSNADFRNMLLKK 924
>gi|410977027|ref|XP_003994914.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Felis catus]
Length = 964
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/480 (27%), Positives = 234/480 (48%), Gaps = 38/480 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP RVQL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARVQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 366 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISATFEKALSAGFIQATDYVEIWQAY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFKQDSSKELEE--LRSAFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 483
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D +VQK RL E R+ +++E+ +L + ++K
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKVAEKEA-ALAQQEEEKAE 600
Query: 309 SVKKT--------------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKE 348
K+ G +KRK++ + E+ P+KR+K P ++
Sbjct: 601 QRKRARAEKKALKKKKKTRGADKRKAEEDDEKEWGDDEEEQPSKRRKVEDSTPSAGEAQD 660
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED 407
+ L ++ + +++ + +K VP + D T F+SN+ + D
Sbjct: 661 REPEAGLLGKSVPVDVDPPSKQKERAAALKRDVPKVPHDSSKDSITVFVSNLPYSMSEPD 720
Query: 408 --LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V+ IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 VQLRPLFEACGEVAEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVS 779
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ + + AV K
Sbjct: 805 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYESESQASQAVLKMD 863
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK RAP Q G G ++ S + + Q
Sbjct: 864 GMTVKENVIKVAISNPPQRKVPEKPEARRAPGGALVPRQIYGARGKGRTQLSLLPRALQR 923
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
G + G P PA+ T + SN +F K+ ++K
Sbjct: 924 PGAPAAQAENG-----------PAPRPAV--TTSAATEAPKMSNADFAKLLLRK 964
>gi|432105098|gb|ELK31467.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Myotis
davidii]
Length = 1010
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 234/481 (48%), Gaps = 39/481 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 351 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 410
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER IS FEK+L F +Y++++
Sbjct: 411 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHHVISVTFEKALSAGFIQATDYVEIWQAY 470
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 471 LDYLRRRVDFKQDSSKELEE--LRSAFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 528
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 529 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 586
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D +VQK RL E R+ +++E+ + ++ EH
Sbjct: 587 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEATLAQQEEEKAEH 646
Query: 309 ---------SVKKT---GREKRKSDSNISY------EQSPAKRQK---HAPQKPKKVHDK 347
++KK G EKRK+D + E+ P+KR+K P + D
Sbjct: 647 RKRARAEKKALKKKVARGAEKRKADEDAEKEWGGDEEEQPSKRRKLENSVPAAAEAAPDL 706
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYE 406
E+ ++ + T + +++ +K VP + D T F+SN+
Sbjct: 707 EE-EMGLFGKSASADVTAPSKQKERAATALKRDVPKVPHDSSKDSVTVFVSNLPYSMEEP 765
Query: 407 D--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
D L+ F G V+ +R + G RG YV+F +++ A+ +++ G+ + +
Sbjct: 766 DMKLQPLFEACGEVAEVRPIFSN-RGDFRGYCYVEFKEEKSALQALQLDRKNVGGRPMFV 824
Query: 465 A 465
+
Sbjct: 825 S 825
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ + + AV K
Sbjct: 851 FISGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYESESQASQAVMKMD 909
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M + + + +A SNP QRK A + G G + +++ +RG+
Sbjct: 910 GMTIKENVIKVAISNPPQRKVPEKPEA---------RKGPGGPNVPRQTY-----GARGK 955
Query: 514 GDSVQLKGKNTFAVPRNV-RPL-------GFPAIKPK--TEEGEDLKPKSNDEFRKMFIK 563
G + QL +PR + RP PA+KP T E + SN +F K+ ++
Sbjct: 956 GRT-QLS-----LLPRALHRPSTTGAQAENGPALKPAVTTSEATEAPKMSNADFAKLLLR 1009
Query: 564 K 564
K
Sbjct: 1010 K 1010
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 232/479 (48%), Gaps = 27/479 (5%)
Query: 9 EEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLD 68
E+ IS Q ++E Y YL YE+ DPGR+ +LYERAITD + +WL+Y YL+
Sbjct: 279 EKLISTQ--GENELLDAYKEYLLYEKQQDDPGRITVLYERAITDLSLDVSIWLNYLTYLE 336
Query: 69 KTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFE 128
+K+ +V+ VY RA++N PW +LW + + S ER + ++ + E +L FS E
Sbjct: 337 DKIKIESVLDTVYQRASRNIPWCSKLWQKWIRSYERWQKPVSKVQILLENALTTGFSIAE 396
Query: 129 EYLDLFLTRIDGLRRRI-LFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGLLRLYA 186
+Y +L++T ++ LRRR + E E LD ++ +TF +A DY+++ N D +
Sbjct: 397 DYRNLWMTYLEFLRRRYEMVLEEEEKRLD--VLLDTFNKACDYMAQCFGLNGDPDCIILQ 454
Query: 187 YWAHLEQSMGKDMVSARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCY 244
YWA E +M AR +W +L G +A W YI++E R +Y +
Sbjct: 455 YWARTEGIHANNMERARVLWADILS-QGHSTKASYWLEYIALERYCGDTKHLRKLYHKAL 513
Query: 245 SKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESAD 304
+ E I ++W+ FER+ G LE + K +LE ++ +E + + E++
Sbjct: 514 AS--VTDWPESIANSWIDFERDEGNLEQMEICEMKTKEKLE-----KNAEEKRKIQETST 566
Query: 305 QKEHSVKKTGREKRKSDS-----NISYEQSPAKRQKHAPQKPK-KVHDKEKRQVQNLAEE 358
+ + S+ KRKSD N+S Q + KPK + + ++ N E
Sbjct: 567 ESKLSMHYKKINKRKSDDTGKWKNLSCLQPKIVKNDKIQVKPKLQDYLNINAKINNNGTE 626
Query: 359 NEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
+E + K D K + T F+SN++ AT E++R G +
Sbjct: 627 SESKIIPPGFTVLENKYIDAD----NQKEVDNNITVFVSNLDYTATEEEVRDALKLAGPI 682
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
+ +++ D + G+S+G YV + E + A+ ++ G+ + ++R +P + SG
Sbjct: 683 TLFKMIKD-YRGRSKGYCYVQLSNAEAVEIALKMDRIAIRGRPMFVSRCDPNKNTRRSG 740
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + + T E+L F G + +R++ + G S+GLAYV++ D+ A A+
Sbjct: 753 FVKGLPITTTKEELEEIFKIYGALKEVRLVTYR-NGHSKGLAYVEYCDEATAAKALLGID 811
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTS 497
M + GK +S+A S P RK S Q +S T + T+
Sbjct: 812 GMKIHGKVISVAISQPPYRKKSQTVEDNDGQIKSLGATATSRTA 855
>gi|351698640|gb|EHB01559.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Heterocephalus glaber]
Length = 924
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 228/483 (47%), Gaps = 46/483 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R L+++ER EIS FEK+L F +Y++++
Sbjct: 365 LSVHSRAVRNCPWTVALWSRYLMAMERHGVDHGEISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFGQDSSKELEE--LRTAFTRALEYLQQEVEERFNESGDPSCMIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDNIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELR--LFRSQQESKSLPESADQKEHS 309
E +C L ER GTLED+D +VQK RL +R ++ ++ +L + ++K
Sbjct: 541 YPEHVCEVLLTMERTEGTLEDWDVAVQKTETRLARVREQRMKAAEKEAALVQQEEEKAEQ 600
Query: 310 VKKTGREK---------RKSDSNISYE----------QSPAKRQKH----APQKPKKVHD 346
K+ EK R +D E + PAKR++ AP P +
Sbjct: 601 RKRVRAEKKALKKKKKPRGADKPREEEDEKEWGDADGEQPAKRRRLENSVAPGGPAAGME 660
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATY 405
++ LA +N + + +++ K +K +P + D T F+SN+
Sbjct: 661 EDT----GLAGKNAAVDVETPSKQKEKAAALKRDMPKVPHDSSKDSITVFVSNLPYSMVE 716
Query: 406 ED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
+ LR F G V+ IR + G RG YV F D+ A+ K+K G S
Sbjct: 717 PEVKLRPLFEACGEVAEIRPIFSN-RGDFRGYCYVQFKDEN---TALEKHKLFISGLPFS 772
Query: 464 IAR 466
+
Sbjct: 773 CTK 775
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 388 FTDECTA------FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
F DE TA F+S + T E+L G V +R++ ++ GK +GLAYV++
Sbjct: 752 FKDENTALEKHKLFISGLPFSCTKEELEDICKAHGTVKELRLVTNR-AGKPKGLAYVEYE 810
Query: 442 DDEHLAAAVAKNKQMFLGKK-LSIARSNPKQRK 473
++ + AV K M + + + +A SNP QRK
Sbjct: 811 NESQASQAVMKMDGMTIKENVIKVAISNPPQRK 843
>gi|431894111|gb|ELK03912.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Pteropus
alecto]
Length = 981
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 227/486 (46%), Gaps = 50/486 (10%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 323 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 382
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 383 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQTISVTFEKALSAGFIQATDYVEIWQAY 442
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 443 LDYLRRRVDFRQDSSKELEE--LRSAFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 500
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + T
Sbjct: 501 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHRAV--QCTSD 558
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D +VQK RL E R+ ++E+ + ++ EH
Sbjct: 559 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAVEKEAALAQQEEEKAEH 618
Query: 309 -------------SVKKTGREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
K G +KRK+D + E+ P+KR++ P
Sbjct: 619 RKRARAEKKALKKKKKTRGADKRKADEDDEKEWGDDEEEQPSKRRRIENSVPI------A 672
Query: 350 RQVQNLAEENE--GRETKQTVEEQPKKQPIKDAVPGRT------KGFTDECTAFLSNINL 401
+ QNL E G+ V + P KQ + AV R D T F+SN+
Sbjct: 673 GEAQNLEAETGLFGKSASIDV-DPPSKQKERAAVLKRDVPKVPHDSSKDSITVFVSNLPY 731
Query: 402 KATYED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
D LR F G V IR + G RG YV+F +++ A+ +++ G
Sbjct: 732 SMEEPDVKLRPLFEACGEVVEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKNVEG 790
Query: 460 KKLSIA 465
+ + ++
Sbjct: 791 RPMFVS 796
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 822 FISGLPFSCTKEELEEICKAHGTVRDIRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 880
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK ++ P Q G G ++ S + + Q
Sbjct: 881 GMTIKENVIKVAISNPPQRKVPEKPEAKKGPGGPMVLRQIYGARGKGRTQLSLLPRALQ- 939
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPK-TEEGEDLKPK-SNDEFRKMFIKK 564
R + + +N PA KP T PK SN +F K+ ++K
Sbjct: 940 --RPSTTAAQAENG------------PAPKPAVTTSAATEAPKMSNADFAKLLLRK 981
>gi|291411787|ref|XP_002722167.1| PREDICTED: squamous cell carcinoma antigen recognized by T cells 3
[Oryctolagus cuniculus]
Length = 963
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 228/481 (47%), Gaps = 42/481 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 307 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 366
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 367 LSVHSRAVRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 426
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R TF RA ++L +++ ++ D + WA +E
Sbjct: 427 LDYLRRRVDFKQDSSQELEE--LRSTFTRALEHLQQEVEERFSESGDPSCVIMQNWARIE 484
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y S+E R R + + T
Sbjct: 485 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYSLERAHGDTQHCRKALHR--AVQCTSD 542
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRS-----------QQESKSLP 300
E +C L ER GTLED+D +VQK RL + R Q+E K+
Sbjct: 543 YPEHVCDVLLTMERTEGTLEDWDVAVQKTETRLARVNEQRLKAAEKEAALAQQEEEKAEQ 602
Query: 301 ESADQKEHSVKKTGREKRKSDSNIS-----------YEQSPAKRQKHAPQKPK--KVHDK 347
+ E K ++ R +D+ + E+ PAKR++ P VHD
Sbjct: 603 RKRARAEKKALKKKKKTRSTDTRPAEEDGDKEWGDEEEEQPAKRRRVENSVPAAGAVHDG 662
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNI--NLKAT 404
+ + R +KQ + K +K VP + D T F+SN+ +++
Sbjct: 663 AQESGVTGKPIDVDRPSKQ----KEKAASLKRDVPKVPHDSSKDSVTVFVSNLPYSMEEP 718
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
E LR F G V IR + G RG YV+F +++ A+ +++ G+ + +
Sbjct: 719 DEKLRPLFEACGEVVEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKSVEGRPMFV 777
Query: 465 A 465
+
Sbjct: 778 S 778
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 863 GMTIRENVIKVAISNPPQRKAPEKPEARKAPGGPLVPRQIYGARGKGRTQLSLLPRALQR 922
Query: 511 RGRG 514
G G
Sbjct: 923 PGAG 926
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 224/482 (46%), Gaps = 47/482 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y Y+ +E +GDP R+QL+YERA+ + + DLW Y QYLD+ LKV +V
Sbjct: 275 AETPKLAEYQAYIDFEMKAGDPARIQLIYERALAENCLVPDLWARYNQYLDRQLKVKELV 334
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW LW+R LL++ER R IS +FEK+L F +Y++++
Sbjct: 335 LSAHDRAVRNCPWTVGLWIRYLLAMERHRVEHSIISEMFEKALNAGFIQATDYVEIWQAY 394
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F+ + L+ +R TF RA +YL +++ ++ D + WA +E
Sbjct: 395 LDYLRRRVDFTQDSSKELEE--LRSTFARAVEYLKQEVEERFSESGDPSCTIMQNWARVE 452
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 453 ARLCNNMQKARELWDNIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 510
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVK 311
E +C L ER GTLED+D +VQK RL + R++ K + ++E + +
Sbjct: 511 YPEHVCEVLLTLERIEGTLEDWDAAVQKTENRLARVNEQRAKAAEKEAALAKQEEERAEQ 570
Query: 312 KTGR----------------EKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNL 355
+ +KRK+D + E + P K H E V L
Sbjct: 571 RKQARAEKKASKKAKKTKIGDKRKADEDDEGEWG------QEEELPSKRHRGEGDGV--L 622
Query: 356 AEENE-------GRETKQTVEEQPKKQPI---KDAVPGRTKGFTDECTAFLSNINLKATY 405
EE+ GR K PK++ KD D+ T F+SN++
Sbjct: 623 PEEDMEVETGLFGRGEKPDGPAGPKEKASTSRKDIPKVLHDSSKDKVTVFVSNLSYTMAE 682
Query: 406 ED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
+ LR F G V IR + + G RG YV F ++E A+A ++ G+ +
Sbjct: 683 PEAKLRELFGSCGEVVEIRAVFNN-KGTFRGYCYVQFREEEAARQALALDRTAVEGRPMF 741
Query: 464 IA 465
++
Sbjct: 742 VS 743
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ + + AV K
Sbjct: 769 FISGLPFSCTKEELEEVCKAHGNVKDIRLVTNR-AGKPKGLAYVEYESEAQASQAVLKMD 827
Query: 455 QMFLGKK-LSIARSNPKQRK 473
+ + + + SNP RK
Sbjct: 828 GLTMKDHVIKVMISNPPLRK 847
>gi|383873332|ref|NP_001244484.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|355692773|gb|EHH27376.1| hypothetical protein EGK_17559 [Macaca mulatta]
gi|355786497|gb|EHH66680.1| hypothetical protein EGM_03721 [Macaca fascicularis]
gi|380786253|gb|AFE65002.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|384950574|gb|AFI38892.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
Length = 963
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 229/481 (47%), Gaps = 40/481 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLSEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER G+LED+D +VQK RL E R+ +++E+ + + ++ E
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDTAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 309 SVKKTGREKRKSDSNISYEQSPAKR-------------QKHAPQKPKKVHDK--EKRQVQ 353
+K R ++K+ + P KR ++ P K ++V + E + Q
Sbjct: 601 --RKRARAEKKALKKKKKTRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPEAGETQ 658
Query: 354 NLAEENEGRETKQTVE-EQPKKQPIKDAVPGRT------KGFTDECTAFLSNINLKATYE 406
N+ TV+ E P KQ K A R D T F+SN+
Sbjct: 659 NVEVAAGPAGKCATVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEP 718
Query: 407 D--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
D LR F G V IR + G RG YV+F +++ A+ +++ G+ + +
Sbjct: 719 DVKLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFV 777
Query: 465 A 465
+
Sbjct: 778 S 778
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENVIKVAISNPPQRK 882
>gi|403281745|ref|XP_003932338.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Saimiri boliviensis
boliviensis]
Length = 972
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 229/482 (47%), Gaps = 42/482 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 314 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 373
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 374 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 433
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 434 LDYLRRRVDFKQDSSKELEE--LRAAFARALEYLKQEVEERFNESGDPSCVIMQNWARIE 491
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 492 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 549
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER G+LED+D +VQK RL E RL +++E+ + + ++ E
Sbjct: 550 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRLKAAEKEAALVQQEEEKAEQ 609
Query: 309 SVKKTGREKRKSDSNISYEQSPAKR-------------QKHAPQKPKKVHDK--EKRQVQ 353
+K R ++K+ + P KR ++ P K ++V + + Q
Sbjct: 610 --RKRARAEKKALKKKKKTRGPDKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAPAETQ 667
Query: 354 NLAEENEGRETKQTV--EEQPKKQPIKDAVPGRT------KGFTDECTAFLSNINLKATY 405
N+ E G K V E P KQ K A R D T F+SN+
Sbjct: 668 NV-ESAAGPAGKCAVVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQE 726
Query: 406 ED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
D LR F G V IR + G RG YV+F +++ A+ +++ G+ +
Sbjct: 727 PDVKLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMF 785
Query: 464 IA 465
++
Sbjct: 786 VS 787
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 46/188 (24%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 813 FISGLPFSCTKEELEEICKAHGNVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 871
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP S Q G G
Sbjct: 872 GMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMLSPQTYGARG--------------- 916
Query: 511 RGRGDSVQLKGKNTFA-VPRNV-RPLGFPAIKPKTEEGEDLK-----------PK-SNDE 556
KG+ A +PR + RP A P+ E G PK SN +
Sbjct: 917 ---------KGRTQLALLPRALQRP---SAAAPQAENGPAPAPAVATPPTTEAPKMSNAD 964
Query: 557 FRKMFIKK 564
F K+F++K
Sbjct: 965 FAKLFLRK 972
>gi|344295187|ref|XP_003419295.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Loxodonta africana]
Length = 968
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 229/488 (46%), Gaps = 54/488 (11%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 310 AEAPRLAEYQAYIDFEMKVGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 369
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + +S FEK+L F +Y++++
Sbjct: 370 LSVHNRAVRNCPWTVALWSRYLLAMERYEVDHQTMSATFEKALNAGFIQATDYVEIWQAY 429
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R TF RA DYL +++ ++ D + WA +E
Sbjct: 430 LDYLRRRVDFQQDSSKELEE--LRSTFTRALDYLKQEVEERFNESGDPSCVIMQNWARIE 487
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 488 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 545
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPE 301
E +C L ER GTLED+D +VQK RL + R +QQE E
Sbjct: 546 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEE----E 601
Query: 302 SADQKEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVH 345
A+Q++ + + G +K+++D + E+ P+KR++ V
Sbjct: 602 KAEQRKRARAEKKALKKKKKIRGGDKQRADEDDEKEWGDDEEEQPSKRRRVE----NSVP 657
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT------DECTAFLSNI 399
+K Q + G+ V P KQ K A R D T F+SN+
Sbjct: 658 SADKAQGTGVEAGLAGKRAPVDV-GPPSKQKEKAASLKRDMAKVPHDSSKDSITVFVSNL 716
Query: 400 NLKATYED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMF 457
D LR F G V+ IR + G RG YV+F D++ A+ +++
Sbjct: 717 PYSMGEPDVALRPLFETCGEVAEIRPIFSN-RGDFRGYCYVEFKDEKSALQALELDRKNV 775
Query: 458 LGKKLSIA 465
G+ + ++
Sbjct: 776 EGRPMFVS 783
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 809 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 867
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 868 GMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMVPRQIYGARGKGRTQLSLLPRALQ- 926
Query: 511 RGRGDSVQLKGKNTFAVPRNVR-PLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ + A P+ P PA+ T + SN +F K+ ++K
Sbjct: 927 -----------RPSPAAPQTENGPAPCPAV--ATSAATEAPKMSNADFAKLLLRK 968
>gi|301771702|ref|XP_002921271.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3-like [Ailuropoda melanoleuca]
Length = 964
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 224/479 (46%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP RVQL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKVGDPARVQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER IS FEK+L F +Y++++
Sbjct: 366 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHRAISGTFEKALSAGFIQATDYVEIWQAY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFKQDSSKELEE--LRSAFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 483
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
M +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 484 ARMCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPE 301
E +C L ER GTLED+D +VQK RL + R +QQE + + +
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEEEKVEQ 601
Query: 302 SADQKEHSVKKT------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
+ G +KRK++ + E+ P+KR+K P ++
Sbjct: 602 RKRARAEKKALKKKKKTRGADKRKAEEDDEKEWGDDEEEQPSKRRKVENSTPPAGEAQDL 661
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
L ++ + +++ K +K VP + D T F+SN+ D
Sbjct: 662 EAETGLFGKSAPVDVDPPSKQKEKAAALKRDVPKVPHDSSKDSITVFVSNLPYSLGEPDV 721
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 722 KLRPLFEACGEVVEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKTVEGRPMFVS 779
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 805 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 863
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 864 GMTIKENVIKVAISNPPQRKVPEKPEARKAPGGAMVPRQIYGARGKGRTQLSLLPRALQ- 922
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPK-TEEGEDLKPK-SNDEFRKMFIKK 564
R + + +N PA +P T PK SN +F K+ ++K
Sbjct: 923 --RPSATVAQAENG------------PAPQPXVTASAATEAPKMSNADFAKLLLRK 964
>gi|402887557|ref|XP_003907156.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Papio anubis]
Length = 963
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 231/481 (48%), Gaps = 40/481 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLSEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER G+LED+D +VQK RL E R+ +++E+ + + ++ E
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDTAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 309 SVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE-----KRQVQN---LAEENE 360
+K R ++K+ + P KR + + D+E +R+V+N A E +
Sbjct: 601 --RKRARAEKKALKKKKKTRGPEKRGADEDNEKEWGDDEEEQPSKRRRVENSIPAAGETQ 658
Query: 361 GRETK-------QTVE-EQPKKQPIKDAVPGRT------KGFTDECTAFLSNINLKATYE 406
E TV+ E P KQ K A R D T F+SN+
Sbjct: 659 NIEVAAGPAGKCATVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEP 718
Query: 407 D--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
D LR F G V IR + G RG YV+F +++ A+ +++ G+ + +
Sbjct: 719 DVKLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFV 777
Query: 465 A 465
+
Sbjct: 778 S 778
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENVIKVAISNPPQRK 882
>gi|397525223|ref|XP_003832576.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan paniscus]
Length = 963
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 601 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRFENSIPAAGETQNV 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 661 EVAAGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDA 720
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENIIKVAISNPPQRK 882
>gi|296212815|ref|XP_002752998.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Callithrix jacchus]
Length = 963
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 229/482 (47%), Gaps = 42/482 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFARALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER G+LED+D +VQK RL E RL +++E+ + + ++ E
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRLKAAEKEAALVQQEEEKAEQ 600
Query: 309 SVKKTGREKRKSDSNISYEQSPAKR-------------QKHAPQKPKKVHDK--EKRQVQ 353
+K R ++K+ + P KR ++ P K ++V + + Q
Sbjct: 601 --RKRARAEKKALKKKKKTRGPDKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQ 658
Query: 354 NLAEENEGRETKQTV--EEQPKKQPIKDAVPGRT------KGFTDECTAFLSNINLKATY 405
N+ E G K V E P KQ K A R D T F+SN+
Sbjct: 659 NM-ESAAGPAGKCAVVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQE 717
Query: 406 ED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
D L+ F G V IR + G RG YV+F +++ A+ +++ G+ +
Sbjct: 718 PDAKLKPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMF 776
Query: 464 IA 465
++
Sbjct: 777 VS 778
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 42/186 (22%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKVHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRG- 512
M + + + +A SNP QRK P E+ ++ + +G S Q+ G
Sbjct: 863 GMTIKENVIKVAISNPPQRK------VP-EKPEARKASGGPMPSP----------QTYGA 905
Query: 513 RGDSVQLKGKNTFA-VPRNV-RPLGFPAIKPKTEEGEDLK-----------PK-SNDEFR 558
RG KG+ A +PR + RP A P+ E G PK SN +F
Sbjct: 906 RG-----KGRTQLALLPRALQRP---SAAAPQAENGPAPAPAVATPPATEAPKMSNADFA 957
Query: 559 KMFIKK 564
K+F++K
Sbjct: 958 KLFLRK 963
>gi|73994825|ref|XP_864427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Canis lupus familiaris]
Length = 964
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 230/483 (47%), Gaps = 44/483 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP RVQL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARVQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER IS FEK+L F +Y++++
Sbjct: 366 LSVHNRAVRNCPWTVALWTRYLLAMERHGVDHRVISVTFEKALSAGFIQATDYVEIWQAY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFKQDSSKELEE--LRSAFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 483
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPE 301
E +C L ER GTLED+D +VQK RL + R +QQE E
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEE----E 597
Query: 302 SADQKEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVH 345
A+Q++ + + G +KRK++ + E+ P+KR+K P
Sbjct: 598 KAEQRKRARAEKKALKKKKKTRGADKRKAEEDDEKEWGDDEEEQPSKRRKVENSTPPAGE 657
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNI--NLK 402
++ L ++ + +++ + +K +P + D T F+SN+ ++
Sbjct: 658 AQDLEAEMGLFGKSAPVDVDPPSKQKERAAALKRDMPKVPHDSSKDSITVFVSNLPYSMD 717
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
LR F G V+ IR + G RG YV+F +++ A+ +++ G+ +
Sbjct: 718 EPEVKLRPLFEACGEVTEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKTVEGRPM 776
Query: 463 SIA 465
++
Sbjct: 777 FVS 779
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 805 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 863
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 864 GMTIKENVIKVAISNPPQRK 883
>gi|7661952|ref|NP_055521.1| squamous cell carcinoma antigen recognized by T-cells 3 [Homo
sapiens]
gi|74762140|sp|Q15020.1|SART3_HUMAN RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=hSART-3; AltName:
Full=Tat-interacting protein of 110 kDa; Short=Tip110
gi|961450|dbj|BAA09929.1| KIAA0156 [Homo sapiens]
gi|4996282|dbj|BAA78384.1| squamous cell carcinoma antigen SART-3 [Homo sapiens]
gi|62739971|gb|AAH93784.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|85567456|gb|AAI11984.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|119618223|gb|EAW97817.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_b [Homo sapiens]
gi|168278527|dbj|BAG11143.1| squamous cell carcinoma antigen recognized by T-cells 3 [synthetic
construct]
Length = 963
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 601 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 661 EVAAGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDT 720
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENIIKVAISNPPQRK 882
>gi|158261441|dbj|BAF82898.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 601 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 661 EVAAGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDT 720
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENIIKVAISNPPQRK 882
>gi|332241740|ref|XP_003270038.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Nomascus leucogenys]
Length = 963
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDVAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 601 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 661 EVAAGPAGKCAAIDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDV 720
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 36/183 (19%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M + + + +A SNP QRK P E+ ++ + G + + +RG+
Sbjct: 863 GMTIKENVIKVAISNPPQRK------VP-EKPETRKAPGGPML-------LPQTYGARGK 908
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLK-----------PK-SNDEFRKMF 561
G + QL +PR ++ G A P+ E G PK SN +F K+F
Sbjct: 909 GRT-QLS-----LLPRALQRPG--AAAPQAENGPAAAPAVATPAATEAPKMSNADFAKLF 960
Query: 562 IKK 564
++K
Sbjct: 961 LRK 963
>gi|114646770|ref|XP_001163755.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 3 [Pan troglodytes]
gi|410209428|gb|JAA01933.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410253528|gb|JAA14731.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410290636|gb|JAA23918.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410350455|gb|JAA41831.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
Length = 963
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 601 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 661 EVAAGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDA 720
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENIIKVAISNPPQRK 882
>gi|355717861|gb|AES06077.1| squamous cell carcinoma antigen recognized by T cells 3 [Mustela
putorius furo]
Length = 958
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 230/483 (47%), Gaps = 44/483 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP RVQL++ERA+ + + DLW+ Y+Q+LD+ LKV ++V
Sbjct: 301 AEAPRLAEYQAYIDFEMKIGDPARVQLIFERALVENCLVPDLWIRYSQFLDRQLKVKDLV 360
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 361 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALSAGFIQATDYVEIWQAY 420
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 421 LDYLRRRVDFKQDSSKELEE--LRSAFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 478
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 479 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 536
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPE 301
E +C L ER GTLED+D +VQK RL + R +QQE E
Sbjct: 537 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAAFAQQEE----E 592
Query: 302 SADQKEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVH 345
A+Q++ + + G +KRK++ + E+ P+KR+K P
Sbjct: 593 KAEQRKRARAEKKALKKKKKTRGADKRKAEEDDEKEWGDDEEEQPSKRRKVENSTPPAGE 652
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKAT 404
++ L ++ + +++ + +K +P + D T F+SN+
Sbjct: 653 AQDLEAETGLFGKSAPVDVDPPSKQKERAAALKRDMPKVPHDSSKDSITVFVSNLPYSLG 712
Query: 405 YED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
D LR F G V+ IR + G RG YV+F +++ A+ +++ G+ +
Sbjct: 713 EPDVKLRPLFEACGEVAEIRPIFSN-RGDFRGYCYVEFKEEKSALQALQLDRKTVEGRPM 771
Query: 463 SIA 465
++
Sbjct: 772 FVS 774
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 800 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 858
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 859 GMTIKENVIKVAISNPPQRK 878
>gi|197101013|ref|NP_001124858.1| squamous cell carcinoma antigen recognized by T-cells 3 [Pongo
abelii]
gi|75070943|sp|Q5REG1.1|SART3_PONAB RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3
gi|55726145|emb|CAH89846.1| hypothetical protein [Pongo abelii]
Length = 981
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 323 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 382
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 383 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 442
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 443 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 500
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 501 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 558
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 559 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 618
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 619 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 678
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 679 EVAPGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDA 738
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 739 KLRPLFEACGEVVQIRPIFSN-RGDFRGYRYVEFKEEKSALQALEMDRKSVEGRPMFVS 796
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 822 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 880
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 881 GMTIKENVIKVAISNPPQRK 900
>gi|126324351|ref|XP_001376283.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Monodelphis domestica]
Length = 959
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 234/500 (46%), Gaps = 76/500 (15%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
++++ K +Y Y+++E +GDP R+QL++ERA+ + + DLW Y QYLD+ LK+ ++
Sbjct: 301 VAETPKLAEYQTYIEFELKAGDPARIQLIFERALAENCLVPDLWARYNQYLDRQLKMKDL 360
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW R LL++ER + + +S FEK+L F +Y++++
Sbjct: 361 VLSAHDRAVRNCPWTVGLWNRYLLAMERHGVAHQIVSDNFEKALNAGFIQATDYVEIWQA 420
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +
Sbjct: 421 YLDYLRRRVDFKQDSSRELEE--LRAAFARALEYLEQEVEERFSESGDPSCTIMQNWARV 478
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E + +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 479 EARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTS 536
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV 310
E +C L ER GTLED+D +VQK RL + ++Q K+ + A +
Sbjct: 537 DYPEHVCEVLLTLERIEGTLEDWDTAVQKTENRLARV----NEQRVKAAEKEAALAQQEE 592
Query: 311 KKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEE 370
+KT + KR A+ +K A +K KK +KR+V E+ G E EE
Sbjct: 593 EKTEQRKR------------ARAEKRASKKVKKTKAGDKRKVDEDEEDQWGDEE----EE 636
Query: 371 QPKKQP----------------IKDAVPGRT-----------------------KGF--- 388
QP K+P ++ + GR+ K F
Sbjct: 637 QPCKRPRAGHNLSLTEEAESMSMELGLFGRSEPTEVDPPSKQKERAAAIRKEMPKVFHDS 696
Query: 389 -TDECTAFLSNINLKATYED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
D T F+SN+ D LR F G V+ IR + G RG YV+F +++
Sbjct: 697 NKDNITVFVSNLPYGLGEPDVKLRPLFEPFGEVTEIRPIFSN-RGDFRGYCYVEFKEEKA 755
Query: 446 LAAAVAKNKQMFLGKKLSIA 465
A++ +++M G+ + ++
Sbjct: 756 ALQALSLDRKMVDGRPMFVS 775
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 19/174 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 801 FISGLPFSCTKEELEDICKVHGNVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 859
Query: 455 QMFLGKK-LSIARSNPKQRK--DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
M + + + +A SNP QRK D Q G G ++ S + + Q
Sbjct: 860 GMTIKQNVIKVAISNPPQRKLPDRPEAGRALGAMVPRQVYGARGKGRTQLSLLPRALQ-- 917
Query: 512 GRGDSVQLKGKN-TFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
R ++ K +N TF P P P PK SN +F KM +KK
Sbjct: 918 -RPNNPGPKTENGTFQTPPG--PSSTPTEAPKM---------SNADFAKMLLKK 959
>gi|348584250|ref|XP_003477885.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Cavia porcellus]
Length = 961
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 226/485 (46%), Gaps = 49/485 (10%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVRDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + E+S FEK+L F +Y++++
Sbjct: 365 LSVHSRAVRNCPWTVALWSRYLLAMERHGVDQGEVSATFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFRQDSSKELEE--LRSAFTRALEYLQQEVEERFSESGDPSCMIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR-----------SQQESKSLP 300
E +C L ER GTLED+D +VQK RL ++ R Q+E K+
Sbjct: 541 YPEHVCEVLLTMERTEGTLEDWDVAVQKTETRLARVKEQRMKAAEKEAALAQQEEEKAEQ 600
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYE----------QSPAKRQKHAPQKPKKVHDKEKR 350
+ E K ++ R +D E + PAKR++ V
Sbjct: 601 RKRVRAEKKALKKKKKPRGADRPREEEEEKEWGDGDGEQPAKRRRVE----NSVAPAGAA 656
Query: 351 QVQNLAEENEGRETKQTVEEQPKKQPIKDA--------VPGRTKGFTDECTAFLSNI--N 400
E G+ T V E P KQ K A VP + D T F+SN+ +
Sbjct: 657 AGPEGEPELTGKHTAMDV-ETPSKQKEKAASLKRDMPKVPHDSS--KDSITVFVSNLAYS 713
Query: 401 LKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK 460
+ LR F G V+ IR + + G RG YV+F D++ A+ +++ G+
Sbjct: 714 MGEPEVKLRPLFEACGEVAEIRPIFNN-RGDFRGYCYVEFKDEKSALQALELDRKSVEGR 772
Query: 461 KLSIA 465
+ ++
Sbjct: 773 PMFVS 777
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 803 FISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVIKMD 861
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 862 GMTIKENVIKVAISNPPQRKVPEKPEARKAPGGLMVPRQMYGARGKGRTQLSLLPRALQR 921
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPK-SNDEFRKMFIKK 564
G + G PA P PK SN +F K+ +KK
Sbjct: 922 PATGSAQAENG---------------PASHPAATSAASEAPKMSNADFAKLLLKK 961
>gi|410923104|ref|XP_003975022.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Takifugu rubripes]
Length = 933
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 214/463 (46%), Gaps = 60/463 (12%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
++ K +Y Y+ +E GDP R+Q+++ER + + + D+W Y YLD+ LK+ ++V
Sbjct: 284 AEPPKMAEYQNYIDFELKEGDPARIQIIFERTLAENCLVPDMWAKYNTYLDRQLKIKDLV 343
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW LW LL+LER A + IS VFEK+L F +Y++++
Sbjct: 344 VSTHDRAVRNCPWTMGLWKSYLLALERHGADHQTISDVFEKALSAGFIQATDYVEIWQAY 403
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ FS E L+ +R F R+ DY+ + + ++ D + WA +E
Sbjct: 404 LDYLRRRVDFSKESSKELEE--LRGAFARSLDYMKQDVEERFGESGDPSCIIMQIWAKIE 461
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
K+M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 462 ALHCKNMQKARELWDTIMTKGNAKYANMWMEYYNLERSYGDSAHCRKALHR--AVQCTSD 519
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVK 311
E +C L FER G+LED+D +VQK RL + Q+ ++ E+ ++ +
Sbjct: 520 YPEHVCEVLLTFERVEGSLEDWDLAVQKTETRLSRV---NEQRARVAVKEANMARQEEDR 576
Query: 312 KTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETK------ 365
R + KSD K QK + K VH EKR+ Q E+N T+
Sbjct: 577 AEQRRRAKSDK---------KAQK---KMGKDVHAGEKRKAQQDYEDNWNNGTEQASKRH 624
Query: 366 -----QTVEEQPKKQP---IKDAVPGRTKG------------------FTDECTAFLSNI 399
QT+EEQ + + K+A PG K +D+ + F+SN+
Sbjct: 625 RGDEDQTIEEQMETETGLLGKNAPPGFKKPQQGASAAPPKQGDDKPELRSDDNSVFISNL 684
Query: 400 --NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF 440
L+ LR F G +S IR + G +G Y+ F
Sbjct: 685 AYTLEEPEAKLRTMFEPCGPISQIRPVFST-KGTFKGYCYIQF 726
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+S + T + L S G + +R++ + +GK +GLAYV+F ++ H + AV K +
Sbjct: 777 FISGLPFSCTKKQLEEVCSSYGTIRDVRLVTYR-SGKPKGLAYVEFAEETHASQAVLKMD 835
Query: 454 KQMFLGKKLSIARSNPKQRK-DSSGERAPTE 483
+ G +S+A SNP +R D G P +
Sbjct: 836 GTVIDGNTISVAISNPPRRNMDKPGSGRPLD 866
>gi|395833841|ref|XP_003789927.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Otolemur garnettii]
Length = 964
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 220/479 (45%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 307 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 366
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL+LER IS FEK+L F +Y++++
Sbjct: 367 LSVHNRAVRNCPWTVALWSRYLLALERHGVDHPVISVTFEKALNAGFIQATDYVEIWQAY 426
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R TF RA +YL +++ ++ D + WA +E
Sbjct: 427 LDYLRRRVDFKQDSSKELEE--LRATFTRALEYLKQEVEERFNESGDPSCMIMQNWARIE 484
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + T
Sbjct: 485 ARLCSNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHRAV--QCTSD 542
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPE 301
E +C L ER GTLED+D +VQK RL + R +QQE + + +
Sbjct: 543 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRMKAAEKEAALAQQEEEKVEQ 602
Query: 302 SADQKEHSVKKT------GREKRKSDS------NISYEQSPAKRQKHAPQKPKKVHDKEK 349
+ G +K ++D E+ P+KR++ P +
Sbjct: 603 RKRARAEKKALKKKKKPRGADKHRADEEDEKEWGADEEEQPSKRRRTENSVPPSGETRGA 662
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
AE + +++ K +K +P + D T F+SN+ D
Sbjct: 663 EVEIGPAERHASVNVDPPSKQKDKAAALKRDMPKVPHDSSKDSITVFVSNLPYSMGEPDV 722
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
L+ F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 723 KLKPLFEACGEVVEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVS 780
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 806 FISGLPFSCTKEELEEICKTHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 864
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M + + + +A SNP QRK P E+ +S + G G+ ++ +RG+
Sbjct: 865 GMTIKENVIKVAISNPPQRK------VP-EKPESRKAPG--GSMVPRQLY-----GARGK 910
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPK------------SNDEFRKMF 561
G + QL +PR L P+ P+ E G +P SN +F K+
Sbjct: 911 GRT-QLS-----LLPRA---LQRPSATPQAENGPAPRPAVTTSATTEAPKMSNADFAKLL 961
Query: 562 IKK 564
++K
Sbjct: 962 LRK 964
>gi|194387736|dbj|BAG61281.1| unnamed protein product [Homo sapiens]
Length = 639
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 217/454 (47%), Gaps = 36/454 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 191 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 250
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 251 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 310
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 311 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 368
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 369 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 426
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK+ RL E R+ +++E+ + E A+Q
Sbjct: 427 YPEHVCEVLLTMERTEGSLEDWDIAVQKIETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 486
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EKR +D + E+ P+KR++ P +
Sbjct: 487 RKRARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 546
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 547 EVAAGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDT 606
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF 440
LR F G V IR + G RG YV+F
Sbjct: 607 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEF 639
>gi|335301350|ref|XP_001926720.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sus scrofa]
Length = 959
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 222/479 (46%), Gaps = 41/479 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER IS FEK+L F +Y++++
Sbjct: 366 LSVHSRAVRNCPWTVALWSRYLLAMERHGVDHRGISVTFEKALSAGFIQATDYVEIWQAY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFKQDSSKELEE--LRSAFARALEYLKQEVEERFNESGDPSCLIMQNWARIE 483
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR-----------SQQESKSLP 300
E +C L ER GTLED+D +VQK RL + R Q+E K+
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEEEKAEQ 601
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNL----- 355
+ E K ++ R ++ N+ E + ++P K +R+++N
Sbjct: 602 RKRARAEKKALKKKKKTRGAEKNMVDEDDEKEWGDEEEEQPSK-----RRRLENSVPPTG 656
Query: 356 -AEENEGRETKQTVEEQPKKQPIKDAVPGRT------KGFTDECTAFLSNI--NLKATYE 406
AE + E P K + A P R D T F+SN+ +L+
Sbjct: 657 EAERGPDADPGLVGVELPSKPKERVAAPRRDVPKVLHDSSKDGITVFVSNLPYSLEEPAT 716
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F ++ A+ +++ G+ + ++
Sbjct: 717 VLRPLFEACGDVVEIRPIFSN-RGDFRGYCYVEFKEEAAAQRALELDRKSVEGRPMFVS 774
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 800 FISGLPFSCTREELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 858
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 859 GMTVKENIIKVAISNPPQRKFPEKPEARKAPGGPLVPRQIYGARGKGRTQLSLLPRALQR 918
Query: 511 RG 512
G
Sbjct: 919 PG 920
>gi|432874007|ref|XP_004072426.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Oryzias latipes]
Length = 941
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 230/480 (47%), Gaps = 39/480 (8%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+++ K +Y Y+ +E GDP R+Q+ +ERA+ + + D+W T+YLD+ LKV ++
Sbjct: 285 VAEPPKLAEYQAYIDFELKVGDPARIQITFERALAENCLVPDMWSKCTKYLDRQLKVKDL 344
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A +S VFEK+L F +Y++++
Sbjct: 345 VLSTHERAVRNCPWTMSLWKSYLLALERHGADHHTVSDVFEKALNAGFIQATDYVEIWQV 404
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E L+ +RE F R DY+ + + ++ D + WA +
Sbjct: 405 YLDYLRRRVDFSKESSKELEE--LREAFSRCLDYMKQDVEERFGESGDPSCVVMQIWARI 462
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIEL-DHINEARSIYKRCYSKRFT 249
E K+M AR +W+ ++ K + W Y ++E D ++ +++++ + + T
Sbjct: 463 EALHCKNMQKARELWDNIMTKGNSKYANMWLEYYNLERSYGDSVHCRKALHR---AVQCT 519
Query: 250 GTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHS 309
E +C L FER G+LED+D +VQK R+ + R++ K A Q+E
Sbjct: 520 TDYPEHVCDVLLTFERVEGSLEDWDTAVQKTESRMNRINEQRAKAAEKE-ANQARQEEER 578
Query: 310 VKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE--------KRQVQNLAEENEG 361
V++ R+ + + +Q A ++ A Q+ + +K+ + V +E
Sbjct: 579 VEQR-RKVKAEKKGLKKDQRGAGEKRKAEQEDQDEWNKDSGKGPKRRRGNVDGTTDEYME 637
Query: 362 RETKQTVEEQPKKQP---IKDAVPG-----------RTKGFTDECTAFLSNI--NLKATY 405
ET P+ +P +K PG +++ D C+ F+SN+ L+
Sbjct: 638 TETGLFGRNAPRTKPSAGLKKVPPGHGDAAEKQIDDKSELRDDCCSVFISNLAFTLQEPE 697
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
L+ F G ++ +R + G RG YV F + A+ +++ G+ + ++
Sbjct: 698 ATLKALFESCGSIAQVRPIFG-HRGVFRGYCYVQFESPASVTEALKLDRREVEGRPMFVS 756
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + L T E L G V +R++ + +G+ +GLAYV+F D+ + AV K
Sbjct: 782 FISGLPLSCTKEQLEEICKQQGTVKDVRLVTYR-SGRPKGLAYVEFADETQASQAVLKMD 840
Query: 455 QMFL-GKKLSIARSNPKQR--KDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
+ + G K+S+A SNP +R + G P Q G+ G ++ S + S +
Sbjct: 841 GVEIEGHKISVAISNPPRRSVNEKPGSSRPVTDMMPRQNYGSRGKGRTQLSLLPRSLHRQ 900
Query: 512 GRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
G G + V G P + SN +F KM + K
Sbjct: 901 AAGVGKVENGTAAEKMEGTVNTTGEP------------RTLSNSDFAKMLLNK 941
>gi|194214206|ref|XP_001916628.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Equus caballus]
Length = 962
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 231/481 (48%), Gaps = 40/481 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEVKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRHLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER IS FEK+L F +Y++++
Sbjct: 366 LSVHNRAVRNCPWTVALWTRYLLAMERHGVDHRVISVTFEKALSAGFIQATDYVEIWQAY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCMIMQNWARME 483
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D +VQK RL E R+ +++E+ +L + ++K
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDVAVQKTETRLARVNEQRIKAAEKEA-ALTQQEEEKAE 600
Query: 309 SVKKT--------------GREKRKSDS------NISYEQSPAKRQKHAPQKPKKVHDKE 348
K+ G +KRK+D E+ P+KR++ P D +
Sbjct: 601 QRKRARAEKKALKKKKKTRGGDKRKADEGEEKEWGDDEEEQPSKRRRLGNSVP-PAGDAQ 659
Query: 349 KRQVQN-LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNI--NLKAT 404
+ Q L ++ + +++ + +K +P + D T F+SN+ ++
Sbjct: 660 GLEAQTGLFGKSAPGDVDSPSKQKERAAALKRDMPKVLHDSSKDSITVFVSNLPYSMGEP 719
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
LR F G V +R + G RG YV+F ++ A+ +++ G+ + +
Sbjct: 720 AAQLRPLFEACGEVVDVRPIFSS-RGDFRGYCYVEFKEERSAQQALELDRKDVEGRPMFV 778
Query: 465 A 465
+
Sbjct: 779 S 779
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 805 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 863
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQ 509
M + + + +A SNP QRK RAP Q G G ++ S + + Q
Sbjct: 864 GMTIKENVIKVAISNPPQRKVPEKPEARRAPGGPMVPRQMYGARGKGRTQLSLLPRALQ 922
>gi|426374017|ref|XP_004053879.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Gorilla gorilla gorilla]
Length = 963
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 228/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQ 305
E +C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ 600
Query: 306 KEHSVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
++ + + G EK +D + E+ P+KR++ P +
Sbjct: 601 RKRARAEKKALKKKKKIRGPEKCGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNV 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED- 407
A + + + +++ K +K +P + D T F+SN+ D
Sbjct: 661 EVAAGPAGKCAAIDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDA 720
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 778
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 863 GMTIKENIIKVAISNPPQRK 882
>gi|39104520|dbj|BAC97877.2| mKIAA0156 protein [Mus musculus]
Length = 957
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 226/484 (46%), Gaps = 47/484 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 366 LSVHSRAVRNCPWTVALWSRYLLAMERHGLDHQTISATFENALSAGFIQATDYVEIWQVY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCLIMQSWARVE 483
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ +L + ++K
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDLAIQKTETRLARVNEQRMKAAEKEA-ALVQQEEEKAE 600
Query: 309 SVKKTGREK---------RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEEN 359
KK EK R +D E + + ++P K +R+ +N
Sbjct: 601 QRKKVRAEKKALKKKKKTRGADKRREDEDEENEWGEEEEEQPSK-----RRRTENSLASG 655
Query: 360 EGRETKQTVEEQPKKQPIKDAVPGRTK----------------GFTDECTAFLSNI--NL 401
E K+ E K I P + K D T F+SN+ ++
Sbjct: 656 EASAMKEETELSGKCLTIDVGPPSKQKEKAASLKRDMPKVAHDSSKDSVTVFVSNLPYSI 715
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
+ LR F G V IR + G RG YV+F +++ A+ ++++ G+
Sbjct: 716 EEPEVKLRPLFEVCGEVVQIRPIFSN-RGDFRGYCYVEFGEEKSAQQALELDRKIVEGRP 774
Query: 462 LSIA 465
+ ++
Sbjct: 775 MFVS 778
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 21/176 (11%)
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
F + + E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 798 VFRVGCPIGSAQEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKM 856
Query: 454 KQMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQ 509
M + + + +A SNP QRK AP Q G G ++ S + + Q
Sbjct: 857 DGMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGKGRTQLSLLPRALQ 916
Query: 510 SRGRGDSVQLKGKNTFAVPRNVR-PLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+G A P+ P PA+ P + SN +F K+ ++K
Sbjct: 917 RQG-------------AAPQAENGPAPGPAVAPSV--ATEAPKMSNADFAKLLLRK 957
>gi|26352049|dbj|BAC39661.1| unnamed protein product [Mus musculus]
Length = 962
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 226/484 (46%), Gaps = 47/484 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 366 LSVHSRAVRNCPWTVALWSRYLLAMERHGLDHQTISATFENALSAGFIQATDYVEIWQVY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCLIMQSWARVE 483
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ +L + ++K
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDLAIQKTETRLARVNEQRMKAAEKEA-ALVQQEEEKAE 600
Query: 309 SVKKTGREK---------RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEEN 359
KK EK R +D E + + ++P K +R+ +N
Sbjct: 601 QRKKVRAEKKALKKKKKTRGADKRREDEDEENEWGEEEEEQPSK-----RRRTENSLASG 655
Query: 360 EGRETKQTVEEQPKKQPIKDAVPGRTK----------------GFTDECTAFLSNI--NL 401
E K+ E K I P + K D T F+SN+ ++
Sbjct: 656 EASAMKEETELSGKCLTIDVGPPSKQKEKAASLKRDMPKVAHDSSKDSVTVFVSNLPYSI 715
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
+ LR F G V IR + G RG YV+F +++ A+ ++++ G+
Sbjct: 716 EEPEVKLRPLFEVCGEVVQIRPIFSN-RGDFRGYCYVEFGEEKSAQQALELDRKIVEGRP 774
Query: 462 LSIA 465
+ ++
Sbjct: 775 MFVS 778
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK AP Q G G ++ S + + Q
Sbjct: 863 GMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGKGRTQLSLLPRALQR 922
Query: 511 RGRGDSVQLKGKNTFAVPRNVR-PLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+G A P+ P PA+ P + SN +F K+ ++K
Sbjct: 923 QG-------------AAPQAENGPAPGPAVAPSV--ATEAPKMSNADFAKLLLRK 962
>gi|8394239|ref|NP_058622.1| squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|81917559|sp|Q9JLI8.1|SART3_MOUSE RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=mSART-3; AltName:
Full=Tumor-rejection antigen SART3
gi|7637845|gb|AAF65228.1|AF172722_1 tumor-rejection antigen SART3 [Mus musculus]
gi|34980898|gb|AAH57156.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|148687992|gb|EDL19939.1| squamous cell carcinoma antigen recognized by T-cells 3, isoform
CRA_b [Mus musculus]
Length = 962
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 226/484 (46%), Gaps = 47/484 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 366 LSVHSRAVRNCPWTVALWSRYLLAMERHGLDHQTISATFENALSAGFIQATDYVEIWQVY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCLIMQSWARVE 483
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ +L + ++K
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDLAIQKTETRLARVNEQRMKAAEKEA-ALVQQEEEKAE 600
Query: 309 SVKKTGREK---------RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEEN 359
KK EK R +D E + + ++P K +R+ +N
Sbjct: 601 QRKKVRAEKKALKKKKKTRGADKRREDEDEENEWGEEEEEQPSK-----RRRTENSLASG 655
Query: 360 EGRETKQTVEEQPKKQPIKDAVPGRTK----------------GFTDECTAFLSNI--NL 401
E K+ E K I P + K D T F+SN+ ++
Sbjct: 656 EASAMKEETELSGKCLTIDVGPPSKQKEKAASLKRDMPKVAHDSSKDSVTVFVSNLPYSI 715
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
+ LR F G V IR + G RG YV+F +++ A+ ++++ G+
Sbjct: 716 EEPEVKLRPLFEVCGEVVQIRPIFSN-RGDFRGYCYVEFGEEKSAQQALELDRKIVEGRP 774
Query: 462 LSIA 465
+ ++
Sbjct: 775 MFVS 778
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK AP Q G G ++ S + + Q
Sbjct: 863 GMTIRENVIKVAISNPPQRKVPEKPEVRTAPGAPMLPRQMYGARGKGRTQLSLLPRALQR 922
Query: 511 RGRGDSVQLKGKNTFAVPRNVR-PLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+G A P+ P PA+ P + SN +F K+ ++K
Sbjct: 923 QG-------------AAPQAENGPAPGPAVAPSV--ATEAPKMSNADFAKLLLRK 962
>gi|432874009|ref|XP_004072427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Oryzias latipes]
Length = 923
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 230/480 (47%), Gaps = 39/480 (8%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+++ K +Y Y+ +E GDP R+Q+ +ERA+ + + D+W T+YLD+ LKV ++
Sbjct: 267 VAEPPKLAEYQAYIDFELKVGDPARIQITFERALAENCLVPDMWSKCTKYLDRQLKVKDL 326
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A +S VFEK+L F +Y++++
Sbjct: 327 VLSTHERAVRNCPWTMSLWKSYLLALERHGADHHTVSDVFEKALNAGFIQATDYVEIWQV 386
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E L+ +RE F R DY+ + + ++ D + WA +
Sbjct: 387 YLDYLRRRVDFSKESSKELEE--LREAFSRCLDYMKQDVEERFGESGDPSCVVMQIWARI 444
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIEL-DHINEARSIYKRCYSKRFT 249
E K+M AR +W+ ++ K + W Y ++E D ++ +++++ + + T
Sbjct: 445 EALHCKNMQKARELWDNIMTKGNSKYANMWLEYYNLERSYGDSVHCRKALHR---AVQCT 501
Query: 250 GTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHS 309
E +C L FER G+LED+D +VQK R+ + R++ K A Q+E
Sbjct: 502 TDYPEHVCDVLLTFERVEGSLEDWDTAVQKTESRMNRINEQRAKAAEKE-ANQARQEEER 560
Query: 310 VKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE--------KRQVQNLAEENEG 361
V++ R+ + + +Q A ++ A Q+ + +K+ + V +E
Sbjct: 561 VEQR-RKVKAEKKGLKKDQRGAGEKRKAEQEDQDEWNKDSGKGPKRRRGNVDGTTDEYME 619
Query: 362 RETKQTVEEQPKKQP---IKDAVPG-----------RTKGFTDECTAFLSNI--NLKATY 405
ET P+ +P +K PG +++ D C+ F+SN+ L+
Sbjct: 620 TETGLFGRNAPRTKPSAGLKKVPPGHGDAAEKQIDDKSELRDDCCSVFISNLAFTLQEPE 679
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
L+ F G ++ +R + G RG YV F + A+ +++ G+ + ++
Sbjct: 680 ATLKALFESCGSIAQVRPIFG-HRGVFRGYCYVQFESPASVTEALKLDRREVEGRPMFVS 738
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 16/173 (9%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + L T E L G V +R++ + +G+ +GLAYV+F D+ + AV K
Sbjct: 764 FISGLPLSCTKEQLEEICKQQGTVKDVRLVTYR-SGRPKGLAYVEFADETQASQAVLKMD 822
Query: 455 QMFL-GKKLSIARSNPKQR--KDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
+ + G K+S+A SNP +R + G P Q G+ G ++ S + S +
Sbjct: 823 GVEIEGHKISVAISNPPRRSVNEKPGSSRPVTDMMPRQNYGSRGKGRTQLSLLPRSLHRQ 882
Query: 512 GRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
G G + V G P + SN +F KM + K
Sbjct: 883 AAGVGKVENGTAAEKMEGTVNTTGEP------------RTLSNSDFAKMLLNK 923
>gi|363739959|ref|XP_415181.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Gallus gallus]
Length = 915
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 227/482 (47%), Gaps = 43/482 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y Y+ +E +GDP R+QL+YERA+ + + DLW Y QYLD+ LKV +V
Sbjct: 258 AETPKLAEYQAYIDFEMKAGDPARIQLIYERALAENCLVPDLWARYNQYLDRQLKVKELV 317
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW LW++ LL++ER IS +FEK+L F +Y++++
Sbjct: 318 LSAHDRAVRNCPWTVGLWIQYLLAMERHGVDHCIISDMFEKALNAGFIQATDYVEIWQAY 377
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F+ + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 378 LDYLRRRVDFTQDSSKELEE--LRSAFARAVEYLKQEVEERFSESGDPSCTIMQNWARVE 435
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 436 ARLCNNMQKARELWDNIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 493
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP------ESADQ 305
E +C L ER GTLED+D +VQK RL + R++ K E A+Q
Sbjct: 494 YPEHVCEVLLTLERIEGTLEDWDAAVQKTENRLARVNEQRAKAAEKEAALARQEEEKAEQ 553
Query: 306 KEHS-----------VKKTGREKRKSDSN-------ISYEQSPAKRQK--HAPQKPKKVH 345
++ S + G EKRK+D + E+ P+KR K ++
Sbjct: 554 RKQSRAEKKASKKAKKNRIG-EKRKADDDDEGEWGQEEEEEQPSKRHKGDGDGLLLEEEM 612
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
+ E E T Q + ++ + + +K D T F+SN++ T
Sbjct: 613 ELETGLFGRSGPEKPDHPTNQKEKPSTSRKDVPKVLHDSSK---DNITVFVSNLSYNMTD 669
Query: 406 ED--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
+ L+ F G VS +R + G RG YV+F D++ A+ ++++ G+ +
Sbjct: 670 PEVKLKELFESCGEVSQVRPVFSN-KGTFRGYCYVEFKDEKSALQALGMDRKVVEGRPMF 728
Query: 464 IA 465
++
Sbjct: 729 VS 730
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 756 FISGLPFSCTKEELEDICKAHGNVKDIRLVTNR-AGKPKGLAYVEYENEAQASQAVLKMD 814
Query: 455 QMFLGKK-LSIARSNPKQRK--DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
+ + + + +A SNP RK D + ++ A Q G G ++ S + + Q +
Sbjct: 815 GLTIKEHVIKVAISNPPLRKLPDKAEAGRASQFAVPRQIYGARGKGRTQLSMMPRALQRQ 874
Query: 512 GRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
N A N PA +E E+ K SN +F KM + K
Sbjct: 875 S----------NPVAKAENGMVQNSPAT--SSERTEEPKKMSNADFAKMLLNK 915
>gi|417405453|gb|JAA49437.1| Putative rna-binding protein sart3 rrm superfamily [Desmodus
rotundus]
Length = 963
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 229/479 (47%), Gaps = 36/479 (7%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP RVQL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFELKVGDPARVQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+ RA +NCPW LW R LL+LER + ++ FEK+L F +Y++++
Sbjct: 365 LSVHGRAVRNCPWTVALWSRYLLALERHGVDHQVMAATFEKALSAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA DYL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRSAFARALDYLKQEVEERFNESGDPSCMIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER G+LED+D +VQK RL E R+ +++E+ + +Q EH
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALAQQEEEQAEH 600
Query: 309 -------------SVKKTGREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEK 349
K G EKRK+D + E+ P KR++ P ++
Sbjct: 601 RKRARAEKKALKKKKKARGAEKRKADEDDEKEWGDDEEEQPFKRRRVENNVPPAAEAQDL 660
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNI--NLKATYE 406
L ++ + +++ + +K +P + D T F+SN+ +++
Sbjct: 661 EAETGLFGKSAAVDVAPPSKQKERAAALKRDMPKVPHDSSKDSITVFVSNLPYSMEEPGV 720
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V+ +R + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 721 KLRPLFEACGEVAEVRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKNVDGRPMFVS 778
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FISGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRKD---SSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK R P Q G G ++ S + + Q
Sbjct: 863 GMTIKENVIKVAISNPPQRKGPEKPEARRGPGGPGVPRQMYGARGKGRTQLSLLPRALQ- 921
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPK-TEEGEDLKPK-SNDEFRKMFIKK 564
R + +N PA KP T PK SN +F K+ ++K
Sbjct: 922 --RPSPAVAQAENG------------PAPKPAVTTSAATEAPKMSNADFAKLLLRK 963
>gi|344255872|gb|EGW11976.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Cricetulus
griseus]
Length = 803
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 230/480 (47%), Gaps = 39/480 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y++YLD+ LKV ++V
Sbjct: 147 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSRYLDRQLKVKDLV 206
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 207 LSVHSRAVRNCPWTVGLWSRYLLAMERHGVDHQMISATFENALSAGFIQATDYVEIWQVY 266
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 267 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCVIMQSWARVE 324
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 325 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 382
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ + + ++ E
Sbjct: 383 YPEHVCEVLLTMERTEGTLEDWDVAIQKTETRLARVNEQRMKAAEKEAALVQQEEERAEQ 442
Query: 309 SVK-------------KTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQN- 354
K G +KRK+D E + ++ P K ++V + V +
Sbjct: 443 RKKVRAEKKALKKKKKTHGADKRKADEEDEREWGEEEEEQ--PSKRRRVENSLASGVASA 500
Query: 355 LAEENEGRETKQTVE-EQPKKQPIKDA-----VPGRTKGFT-DECTAFLSNI--NLKATY 405
+ EE E T++ P KQ K A +P + D T F+SN+ ++
Sbjct: 501 MQEETELSGKCVTIDVASPSKQKEKAASLKLDMPKVAHDSSKDSVTVFVSNLPYSMDEPE 560
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 561 AKLRPLFEACGEVVQIRPVFSN-RGDFRGYCYVEFKEEKSAQQALELDRKNVEGRPMFVS 619
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 645 FISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 703
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 704 GMTIKENVIKVAISNPPQRK 723
>gi|157820585|ref|NP_001100626.1| squamous cell carcinoma antigen recognized by T-cells 3 [Rattus
norvegicus]
gi|149063643|gb|EDM13966.1| squamous cell carcinoma antigen recognized by T-cells 3 (predicted)
[Rattus norvegicus]
Length = 960
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 231/480 (48%), Gaps = 39/480 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 304 AEAPRLAEYQAYIDFEMKVGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 363
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 364 LSVHSRAVRNCPWTVALWSRYLLAMERHGLDHQMISATFENALSAGFIQATDYVEIWQVY 423
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 424 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCLIMQSWARVE 481
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 482 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 539
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ +L + ++K
Sbjct: 540 YPEHVCEVLLTMERTEGTLEDWDLAIQKTETRLARVNEQRMKAAEKEA-ALVQQEEEKAE 598
Query: 309 SVKKT-------------GREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNL 355
KK G +KRK+ + + + ++ P K +++ + V +
Sbjct: 599 QRKKVRAEKKALKKKKTRGADKRKAGEDDDERECGEEEEEQ-PSKRRRMENSLASGVASA 657
Query: 356 AEENEGRETK-QTVEEQP------KKQPIKDAVPGRTKGFT-DECTAFLSNI--NLKATY 405
EE K T++ P K +K +P + D T F+SN+ +++
Sbjct: 658 KEEETKLSGKCLTIDVAPPSKQKEKAASLKRDMPKVAHDSSKDSVTVFVSNLPYSIEEPE 717
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 718 VKLRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSAQQALDLDRKNVEGRPMFVS 776
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 802 FISGLPFSCTKEELEGICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 860
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK AP Q G G ++ S + + Q
Sbjct: 861 GMTIKENVIKVAISNPPQRKVPEKPEVRTAPGAPMVPRQMYGARGKGRTQLSLLPRALQR 920
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+G + +N A P + T + SN +F K+ ++K
Sbjct: 921 QGAAP----QAENGPA----------PGLAATTSVATEAPKMSNADFAKLLLRK 960
>gi|354490464|ref|XP_003507377.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3,
partial [Cricetulus griseus]
Length = 814
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 230/480 (47%), Gaps = 39/480 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y++YLD+ LKV ++V
Sbjct: 158 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSRYLDRQLKVKDLV 217
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 218 LSVHSRAVRNCPWTVGLWSRYLLAMERHGVDHQMISATFENALSAGFIQATDYVEIWQVY 277
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 278 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCVIMQSWARVE 335
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 336 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 393
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ + + ++ E
Sbjct: 394 YPEHVCEVLLTMERTEGTLEDWDVAIQKTETRLARVNEQRMKAAEKEAALVQQEEERAEQ 453
Query: 309 SVK-------------KTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQN- 354
K G +KRK+D E + ++ P K ++V + V +
Sbjct: 454 RKKVRAEKKALKKKKKTHGADKRKADEEDEREWGEEEEEQ--PSKRRRVENSLASGVASA 511
Query: 355 LAEENEGRETKQTVE-EQPKKQPIKDA-----VPGRTKGFT-DECTAFLSNI--NLKATY 405
+ EE E T++ P KQ K A +P + D T F+SN+ ++
Sbjct: 512 MQEETELSGKCVTIDVASPSKQKEKAASLKLDMPKVAHDSSKDSVTVFVSNLPYSMDEPE 571
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 572 AKLRPLFEACGEVVQIRPVFSN-RGDFRGYCYVEFKEEKSAQQALELDRKNVEGRPMFVS 630
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 656 FISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 714
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 715 GMTIKENVIKVAISNPPQRK 734
>gi|326929748|ref|XP_003211018.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Meleagris gallopavo]
Length = 899
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 228/481 (47%), Gaps = 41/481 (8%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y Y+ +E +GDP R+QL+YERA+ + + DLW Y QYLD+ LKV +V
Sbjct: 242 AETPKLAEYQAYIDFEMKAGDPARIQLIYERALAENCLVPDLWARYNQYLDRQLKVKELV 301
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW LW++ LL++ER IS +FEK+L F +Y++++
Sbjct: 302 LSAHDRAVRNCPWTVGLWIQYLLAMERHGVDHCIISEMFEKALNAGFIQATDYVEIWQAY 361
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F+ + L+ +R +F RA +YL +++ ++ D + WA +E
Sbjct: 362 LDYLRRRVDFTQDSSKELEE--LRSSFARAVEYLKQEVEERFSESGDPSCTIMQNWARVE 419
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 420 ARLCNNMQKARELWDNIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 477
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP------ESADQ 305
E +C L ER GTLED+D +VQK RL + R++ K E A+Q
Sbjct: 478 YPEHVCEVLLTLERIEGTLEDWDAAVQKTENRLARVNEQRAKAAEKEAALARQEEEKAEQ 537
Query: 306 KEHS-----------VKKTGREKRKSDSN-------ISYEQSPAKRQKHAPQKPKKVHDK 347
++ S + G EKRK+D + E+ P+KR H + ++
Sbjct: 538 RKQSRAEKKASKKAKKNRIG-EKRKADDDDEGEWGQEEEEEQPSKR--HKGDGDGLLLEE 594
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYE 406
+ L + + + ++ K + VP + D T F+SN++ T
Sbjct: 595 DMELETGLFGRSGPEKPDLSTNQKEKPSTSRKDVPKVLHDSSKDNITVFVSNLSYNMTDP 654
Query: 407 D--LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+ L+ F G V+ IR + G RG YV+F D++ A+ ++ + G+ + +
Sbjct: 655 EVKLKELFESCGEVAQIRPVFSN-KGTFRGYCYVEFKDEKSALQALGLDRNVVEGRPMFV 713
Query: 465 A 465
+
Sbjct: 714 S 714
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV+F ++ + AV K
Sbjct: 740 FISGLPFSCTKEELEDICKAHGNVKDIRLVTNR-AGKPKGLAYVEFENEAQASQAVLKMD 798
Query: 455 QMFLGKK-LSIARSNPKQRK--DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
+ + + + +A SNP RK D + ++ A Q G G ++ S + + Q +
Sbjct: 799 GLTIKEHVIKVAISNPPLRKLPDKAEAGRASQFAVPRQIYGARGKGRTQLSMMPRALQRQ 858
Query: 512 GRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
N A N PA +E E+ K SN +F KM + K
Sbjct: 859 S----------NPVAKAENGMVQNSPAA--SSERTEEPKKMSNADFAKMLLNK 899
>gi|190338766|gb|AAI63594.1| Squamous cell carcinoma antigen recognised by T cells 3 [Danio
rerio]
Length = 951
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 225/494 (45%), Gaps = 60/494 (12%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+S+ K +Y Y+ +E GDP RVQ+++ERA+ + + DLW+ YT YLD+ LK+ ++
Sbjct: 284 VSEPPKLAEYQSYIDFEIKEGDPARVQIIFERALAENCLVPDLWIKYTTYLDRQLKIKDL 343
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A + + VFEK+L F +Y++++ +
Sbjct: 344 VLSAHERAVRNCPWTMGLWKSYLLALERHGADHQTVKDVFEKALNAGFIQATDYVEIWQS 403
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E LD +R F R+ +YL + + ++ D L WA +
Sbjct: 404 YLDYLRRRVDFSKEWSRELDE--LRAAFSRSLEYLKQDVEERFSESGDLSCTLMQIWARI 461
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E K+M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 462 EALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERSYGDAAHCRKALHR--AVQCTS 519
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV 310
E +C L FER G+LED+D +VQK +L + R++ K E+ ++
Sbjct: 520 DYPEHVCDVLLNFERVEGSLEDWDAAVQKTETKLNRVCEQRARVAEK---EALHARQEEE 576
Query: 311 KKTGREKRKSDSNISYEQSPAKR-----------------QKHAPQKPKKVHDKEKRQV- 352
K R K K+D + A R + P K + D V
Sbjct: 577 KAEQRRKVKADKKAQKKGQKANRTGDKRKAEDDDEEEWGEEAELPSKRLRGEDDFDSTVT 636
Query: 353 QNLAEENEG-----------------RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAF 395
+ L E G R+ +Q E P++QP +P + DE F
Sbjct: 637 EELMETESGLFGRRAPPARKTEPPGFRKNQQGAPE-PQRQP--HDMPKEQR--KDENCVF 691
Query: 396 LSNI--NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS--RGLAYVDFIDDEHLAAAVA 451
+SN+ N++ LR F G + +R + FT K RG YV F D + A+
Sbjct: 692 VSNLTFNMEDPEGKLRTLFQGCGTIQQVRPV---FTAKGTFRGYCYVQFEDRLAVPEALK 748
Query: 452 KNKQMFLGKKLSIA 465
++Q G+ + ++
Sbjct: 749 MDRQEVDGRPMYVS 762
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+S + AT E L + G + +IRI+ ++ +GKS+GLAYV+F D+ + AV K +
Sbjct: 788 FISGLPYSATKETLEDLCKEHGTIRAIRIVTNR-SGKSKGLAYVEFEDEAQASQAVLKMD 846
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M LS+A SNP R+ E AP+ + G + I +S R
Sbjct: 847 GTMLENFTLSVAISNPPGRR-MKDEAAPSRFLGAAMPRQLQGARGKGRTQISLLPRSLYR 905
Query: 514 GDSVQLKGKN-TFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ K +N T + P G ++ +T K SN++F +M +KK
Sbjct: 906 QSTPDAKAENGTISAPHATVTDGETSLDTQT------KSLSNEDFARMLLKK 951
>gi|426247439|ref|XP_004017493.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Ovis aries]
Length = 966
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 221/485 (45%), Gaps = 48/485 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 308 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 367
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+SRA +NCPW LW R LL+LER IS FEK+L F +Y++++
Sbjct: 368 LSAHSRAVRNCPWTVALWSRYLLALERHGVEHRVISVTFEKALSAGFIQATDYVEIWQAY 427
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA ++L +++ ++ D + WA +E
Sbjct: 428 LDYLRRRVDFKQDSSKELEE--LRSAFARALEHLKQEVEERFNESGDPSCLIMQNWARIE 485
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 486 ARLCNNMQKARELWDSIMTRGNAKFANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 543
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPE 301
E +C L ER GTLED+D +VQK RL + R +QQE + + +
Sbjct: 544 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEEEKVEQ 603
Query: 302 SADQKEHSVKKT------GREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNL 355
+ G +KR++D + E+ ++ P K ++V + V
Sbjct: 604 RKRARAEKKALKKKKKIRGADKRRADEDD--EKEWGDDEEEQPSKRRRVENS----VPPA 657
Query: 356 AEENEGRETKQTVEEQPK-KQP---IKDAVPGRTK---------GFTDECTAFLSNI--N 400
E G ET + P +P +K+ G + D T F+SN+
Sbjct: 658 GEAEPGSETNLSGSSAPTGTEPPSELKEVRVGARRRDVPKVPHDSSKDGVTVFVSNLPYG 717
Query: 401 LKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK 460
L LR F G V +R + G RG YV+F ++ A+ ++Q G+
Sbjct: 718 LGEPAATLRPLFEACGDVVEVRPIFSN-RGDFRGYCYVEFREEAAALQALQLDRQSVEGR 776
Query: 461 KLSIA 465
+ ++
Sbjct: 777 PMFVS 781
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 20/175 (11%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 807 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENESEASQAVLKMD 865
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK RA Q G G ++ S + + Q
Sbjct: 866 GMTIRENVIKVAISNPPQRKVPEKPEARRASGSALLPRQVYGARGKGRTQLSLLPRALQ- 924
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIK-PKTEEGEDLKPKSNDEFRKMFIKK 564
R + + + AVP PA P T E + SN +F K+ ++K
Sbjct: 925 --RPSAATAQAGHGXAVP--------PACATPATTEAPKM---SNADFAKLLLRK 966
>gi|71834402|ref|NP_001025289.1| squamous cell carcinoma antigen recognized by T-cells 3 [Danio
rerio]
Length = 951
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 224/494 (45%), Gaps = 60/494 (12%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+S+ K +Y Y+ +E GDP RVQ+++ERA+ + + DLW+ YT YLD+ LK+ ++
Sbjct: 284 VSEPPKLAEYQSYIDFEIKEGDPARVQIIFERALAENCLVPDLWIKYTTYLDRQLKIKDL 343
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A + + VFEK+L F +Y++++ +
Sbjct: 344 VLSAHERAVRNCPWTMGLWKSYLLALERHGADHQTVKDVFEKALNAGFIQATDYVEIWQS 403
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS LD +R F R+ +YL + + ++ D L WA +
Sbjct: 404 YLDYLRRRVDFSKGKSMELDE--LRAAFSRSLEYLKQDVEERFSESGDLSCTLMQIWARI 461
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E K+M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 462 EALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERSYGDAAHCRKALHR--AVQCTS 519
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV 310
E +C L FER G+LED+D +VQK +L + R++ K E+ ++
Sbjct: 520 DYPEHVCDVLLNFERVEGSLEDWDAAVQKTETKLNRVCEQRARVAEK---EALHARQEEE 576
Query: 311 KKTGREKRKSDSNISYEQSPAKR-----------------QKHAPQKPKKVHDKEKRQV- 352
K R K K+D + A R + P K + D V
Sbjct: 577 KAEQRRKVKADKKAQKKGQKANRTGDKRKAEDDDEEEWGEEAELPSKRLRGEDDFDSTVT 636
Query: 353 QNLAEENEG-----------------RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAF 395
+ L E G R+ +Q E P++QP +P + DE F
Sbjct: 637 EELMETESGLFGRRAPPARKTEPPGFRKNQQGAPE-PQRQP--HDMPKEQR--KDENCVF 691
Query: 396 LSNI--NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS--RGLAYVDFIDDEHLAAAVA 451
+SN+ N++ LR F G + +R + FT K RG YV F D + A+
Sbjct: 692 VSNLTFNMEDPEGKLRTLFQGCGTIQQVRPV---FTAKGTFRGYCYVQFEDRLAVPEALK 748
Query: 452 KNKQMFLGKKLSIA 465
++Q G+ + ++
Sbjct: 749 MDRQEVDGRPMYVS 762
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+S + AT E L + G + +IRI+ ++ +GKS+GLAYV+F D+ + AV K +
Sbjct: 788 FISGLPYSATKETLEDLCKEHGTIRAIRIVTNR-SGKSKGLAYVEFEDEAQASQAVLKMD 846
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M LS+A SNP R+ E AP+ + G + I +S R
Sbjct: 847 GTMLENFTLSVAISNPPGRR-MKDEAAPSRFLGAAMPRQLQGARGKGRTQISLLPRSLYR 905
Query: 514 GDSVQLKGKN-TFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ K +N T + P G ++ +T K SN++F +M +KK
Sbjct: 906 QSTPDAKAENGTISAPHATVTDGETSLDTQT------KSLSNEDFARMLLKK 951
>gi|449279242|gb|EMC86877.1| Squamous cell carcinoma antigen recognized by T-cells 3, partial
[Columba livia]
Length = 875
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 146/273 (53%), Gaps = 10/273 (3%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y Y+ +E +GDP R+QL+YERA+ + + DLW Y QYLD+ LKV +V
Sbjct: 220 AETPKLAEYQAYIDFEMKAGDPARIQLIYERALAENCLVPDLWARYNQYLDRQLKVKELV 279
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW LW+R LL++ER R IS +FEK+L F +Y++++
Sbjct: 280 LSAHDRAVRNCPWTVGLWIRYLLAMERHRVDHGIISEMFEKALNAGFIQATDYVEIWQAY 339
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F+ + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 340 LDYLRRRVDFTQDSSKELEE--LRSAFARAVEYLKQEVEERFSESGDPSCTIMQNWARVE 397
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 398 ARLCNNMQKARELWDNIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 455
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
E +C L ER GTLED+D +VQK RL
Sbjct: 456 YPEHVCEVLLTLERIEGTLEDWDAAVQKTENRL 488
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV+F ++ + AV K
Sbjct: 716 FISGLPFSCTKEELEEVCKAHGNVKDIRLVTNR-AGKPKGLAYVEFENEAQASQAVLKMD 774
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
+ + + + +A SNP RK RAP + A Q G G ++ S + + Q
Sbjct: 775 GLTVKEHVIKVAISNPPLRKLPDKPEAGRAP-QFAVPRQVYGARGKGRTQLSMMPRALQR 833
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ N A N PA ++ E+ K SN +F KM +KK
Sbjct: 834 QS----------NPVAKAENGMVQNSPAT--SSQPPEEPKKMSNADFAKMLLKK 875
>gi|395513864|ref|XP_003761142.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sarcophilus harrisii]
Length = 1030
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 226/484 (46%), Gaps = 44/484 (9%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
++++ K +Y Y+ +E +GDP R+QL++ERA+ + + DLW Y QYLD+ LK+ ++
Sbjct: 372 VAETPKLAEYQAYIDFELKAGDPARIQLVFERALAENCLVPDLWARYNQYLDRQLKMKDL 431
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW R LL++ER + +S FEK+L F +Y++++
Sbjct: 432 VLSAHDRAVRNCPWTVGLWNRYLLAMERHGVDHQIVSDNFEKALNAGFIQATDYVEIWQA 491
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +
Sbjct: 492 YLDYLRRRVDFKQDSSKELEE--LRAAFARALEYLKQEVEERFSESGDPSCTIMQNWARV 549
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E + +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 550 EARLCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTS 607
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLF--------------RSQ 293
E +C L ER GTLED+D +VQK RL E R+ +++
Sbjct: 608 DYPEHVCEVLLTLERIEGTLEDWDSAVQKTENRLARVNEQRVKAAEKEAALAQQEEEKTE 667
Query: 294 QESKSLPESADQKEHSVKKTGREKRKSDSNISYEQS------PAKRQKHAPQKPKKVHDK 347
Q ++ E K+ K G +KRK+D + E P+KR + P ++
Sbjct: 668 QRKRARAEKRAFKKMKKSKAG-DKRKADEDEDDEWGDEEEEQPSKRPRAGSSLPLAGEEE 726
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGF----TDECTAFLSNI--NL 401
L + E +++ K IK +P K F D T F+SN+ +L
Sbjct: 727 YSGMEMGLFGRSASTEVDPPSKQKEKAAAIKKEMP---KVFHDSNKDNITVFVSNLPYSL 783
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
LR F G V+ IR + G RG YV+F +++ A+ +++ G+
Sbjct: 784 GEPEVKLRPLFEACGEVTEIRPIFSN-RGDFRGYCYVEFKEEKAALQALGLDRKTVDGRP 842
Query: 462 LSIA 465
+ ++
Sbjct: 843 MFVS 846
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 872 FISGLPFSCTKEELEDICKVHGSVRDLRLVTNR-AGKPKGLAYVEYENEAQASQAVLKMD 930
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 931 GMTIKENVIKVAISNPPQRK 950
>gi|156120369|ref|NP_001095330.1| squamous cell carcinoma antigen recognized by T-cells 3 [Bos
taurus]
gi|154425531|gb|AAI51266.1| SART3 protein [Bos taurus]
Length = 957
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 212/484 (43%), Gaps = 46/484 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+SRA +NCPW LW R LL+LER IS FEK+L F +Y++++
Sbjct: 365 LSAHSRAVRNCPWTVALWSRYLLALERHGVEHRVISVTFEKALSAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRSAFARALEYLKQEVEERFSESGDPSCLIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKFANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR-----------SQQESKSLP 300
E +C L ER GTLED+D +VQK RL + R Q+E K
Sbjct: 541 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEEEKVEQ 600
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
+ E K ++ R +D + + E + ++P K +R+V+N
Sbjct: 601 RKRARAEKKALKKKKKTRGADKHRADEDDEKEWGDDEEEQPSK-----RRRVENSVPPAG 655
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGF-----------------TDECTAFLSNI--NL 401
E + P P K D T F+SN+ L
Sbjct: 656 EAEPGSEADLSGSSAPAATESPSELKEVRVGARRRDVPKVPHDSSKDGVTVFVSNLPYGL 715
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
LR F G V +R + G RG YV+F ++ A+ ++Q G+
Sbjct: 716 GEPAATLRPLFEACGDVVEVRPIFSN-RGDFRGYCYVEFREEAAALQALQLDRQSVEGRP 774
Query: 462 LSIA 465
+ ++
Sbjct: 775 MFVS 778
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 804 FVSGLPFSCTKEELEEICRAHGTVKDIRLVTNR-AGKPKGLAYVEYENESQASQAVLKMD 862
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 863 GMTIRENVIKVAISNPPQRKVPEKPEARKAPGSALLPRQVYGARGKGRTQLSLLPRALQ- 921
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
R + + +N A P PK SN +F K+ ++K
Sbjct: 922 --RPSAATAQAENGPATPATTE-------APKM---------SNADFAKLLLRK 957
>gi|166797005|gb|AAI59117.1| Sart3 protein [Danio rerio]
Length = 952
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 224/494 (45%), Gaps = 60/494 (12%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+S+ K +Y Y+ +E GDP RVQ+++ RA+ + + DLW+ YT YLD+ LK+ ++
Sbjct: 285 VSEPPKLAEYQSYIDFEIKEGDPARVQIIFGRALAENCLVPDLWIKYTTYLDRQLKIKDL 344
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A + + VFEK+L F +Y++++ +
Sbjct: 345 VLSAHERAVRNCPWTMGLWKSYLLALERHGADHQTVKDVFEKALNAGFIQATDYVEIWQS 404
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E LD +R F R+ +YL + + ++ D L WA +
Sbjct: 405 YLDYLRRRVDFSKEWSRELDE--LRAAFSRSLEYLKQDVEERFSESGDLSCTLMQIWARI 462
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E K+M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 463 EALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERSYGDAAHCRKALHR--AVQCTS 520
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV 310
E +C L FER G+LED+D +VQK +L + R++ K E+ ++
Sbjct: 521 DYPEHVCDVLLNFERVEGSLEDWDAAVQKTETKLNRVCEQRARVAEK---EALHARQEEE 577
Query: 311 KKTGREKRKSDSNISYEQSPAKR-----------------QKHAPQKPKKVHDKEKRQV- 352
K R K K+D + A R + P K + D V
Sbjct: 578 KAEQRRKVKADKKAQKKGQKANRTGDKRKAEDDDEEEWGEEAELPSKRLRGEDDFDSTVT 637
Query: 353 QNLAEENEG-----------------RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAF 395
+ L E G R+ +Q E P++QP +P + DE F
Sbjct: 638 EELMETESGLFGRRAPPARKTEPPGFRKNQQGAPE-PQRQP--HDMPKEQR--KDENCVF 692
Query: 396 LSNI--NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS--RGLAYVDFIDDEHLAAAVA 451
+SN+ N++ LR F G + +R + FT K RG YV F D + A+
Sbjct: 693 VSNLTFNMEDPEGKLRTLFQGCGTIQQVRPV---FTAKGTFRGYCYVQFEDRLAVPEALK 749
Query: 452 KNKQMFLGKKLSIA 465
++Q G+ + ++
Sbjct: 750 MDRQEVDGRPMYVS 763
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+S + AT E L + G + +IRI+ ++ +GKS+GLAYV+F D+ + AV K +
Sbjct: 789 FISGLPYSATKETLEDLCKEHGTIRAIRIVTNR-SGKSKGLAYVEFEDEAQASQAVLKMD 847
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M LS+A SNP R+ E AP+ + G + I +S R
Sbjct: 848 GTMLENFTLSVAISNPPGRR-MKDEAAPSRFLGAAMPRQLQGARGKGRTQISLLPRSLYR 906
Query: 514 GDSVQLKGKN-TFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ K +N T + P G ++ +T K SN++F +M +KK
Sbjct: 907 QSTPDAKAENGTISAPHATVTDGETSLDTQT------KSLSNEDFARMLLKK 952
>gi|156373168|ref|XP_001629405.1| predicted protein [Nematostella vectensis]
gi|156216405|gb|EDO37342.1| predicted protein [Nematostella vectensis]
Length = 817
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 252/544 (46%), Gaps = 49/544 (9%)
Query: 4 ARAHLEEQISRQDLSDSEK---FQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLW 60
A LEE + +D +S K + Y YLKYE G+P R+ LYERA+ D + SDLW
Sbjct: 203 AETKLEEILPYEDELNSNKSNSLEAYKNYLKYEVQKGEPVRIVCLYERALKDNCLYSDLW 262
Query: 61 LDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
++YT YLD LK+ +VV + RA +NCPWV LW +L+LERS +I +F+K+L
Sbjct: 263 MEYTTYLDSKLKISSVVLPAHERAVRNCPWVASLWQNYMLALERSNQPSSKIKEIFDKAL 322
Query: 121 LCAFSTFEEYLDLFLTRIDGLRRRIL-FSGEVEGVLDYSLIRETFQRASDYLSEQMKNT- 178
C FS+ E+L L+ + +RRR+ ++ E V ++ R++ + A +Y+ N
Sbjct: 323 TCGFSSGVEFLQLWRCYCNHMRRRVKEWTEESHEVKEW---RDSLKSAIEYMQHYFGNEG 379
Query: 179 DGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARS 238
D L WA LE ++ A+ +WE ++ G LE W Y ++ + R
Sbjct: 380 DSTNLLDRCWARLEAYKLSNLSEAQRLWEIVISRHGRELEYWVEYANLVRTCKDVQSCRK 439
Query: 239 IYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKS 298
+ R + + E A L E E G+LED+D S + RL+ + R++ K
Sbjct: 440 VLHR--AVQSVSDNPEGATRALLSLEEEEGSLEDWDSSYARCATRLKIVNERRTRAAEKE 497
Query: 299 LPESADQKEHSVKKTGRE----------------------KRKSDSNISYEQSPAKRQKH 336
+ + + +E + KK KRK SY SPA+
Sbjct: 498 MSQMKEGEELAEKKKASRTEKKATKKQEKKAEKKDKAQTMKRKVRE--SYSLSPARNN-- 553
Query: 337 APQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQP-KKQPIKDAVPGRTKGFTDECTAF 395
+H Q E ++ ++ + +P K+P ++ + +D F
Sbjct: 554 -----ITLHSLCTVYSQAGMEGSQNQQIDKVRSSEPAAKKPCGES----EEESSDPRKVF 604
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN+ T + LR FS +G V +RI+ + G+S+G AYV+F ++ + AA+A +++
Sbjct: 605 ISNLLFSITEDHLRDKFSKLGEVLDVRIVKN-MAGRSKGYAYVEFNNESTVQAALAMDRE 663
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRGD 515
G+ + I+ K K+ + + PT + N A KES IE G
Sbjct: 664 KMEGRPMFISPCVDKA-KNPTTFKFPTSLDKHTLFVSNLPFDA-KESEIEELFSKHGVVK 721
Query: 516 SVQL 519
V+L
Sbjct: 722 QVRL 725
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+SN+ A ++ FS G V +R++ ++ GK +G YV++ + + A
Sbjct: 692 DKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNR-AGKPKGYGYVEYEQESSASTA 750
Query: 450 VAK-NKQMFLGKKLSIARSNPKQRK 473
V +K G+ +S+A SNP R+
Sbjct: 751 VLTLDKTEVKGRTISVALSNPPTRR 775
>gi|348528531|ref|XP_003451770.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Oreochromis niloticus]
Length = 948
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 214/472 (45%), Gaps = 68/472 (14%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
++++ K +Y Y+ +E GDP R+Q+ +ERA+++ + D+W YT YLD+ LK ++
Sbjct: 285 VAETPKLAEYQAYIDFELKEGDPARIQITFERALSENCLVPDMWAKYTIYLDRQLKFKDL 344
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A + +S VFEK+L F +Y++++
Sbjct: 345 VLSTHERAVRNCPWTMGLWKSYLLALERHGADHQTVSDVFEKALNAGFIQATDYVEIWQA 404
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E L+ +R F R+ DY+ + ++ D + WA +
Sbjct: 405 YLDYLRRRVDFSKESSKELEE--LRAAFSRSLDYMKHDVEERFGESGDPSCIIMQIWARI 462
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIEL-DHINEARSIYKRCYSKRFT 249
E K+M AR +W+ ++ K + W Y ++E D I+ +++++ + + T
Sbjct: 463 EALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERSYGDSIHCRKALHR---AVQCT 519
Query: 250 GTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESK--SLPESADQKE 307
E +C L FER G+LED+D +VQK RL + R++ K +L D++
Sbjct: 520 SDYPEHVCDVLLSFERVEGSLEDWDFAVQKTETRLNRINEQRAKAAEKEANLARQEDERA 579
Query: 308 HSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQT 367
+K EK+ Q ++ A +K K D Q+ E+ G + +
Sbjct: 580 EQRRKAKVEKKA--------QKKVQKGTRAGEKRKAEQD----DYQDEWNEDAGPKRHRG 627
Query: 368 VEEQPKKQ-------PIKDAVPGRTKGF----------------------------TDEC 392
+QP + P A P K D
Sbjct: 628 NADQPTDEYMETETGPFGKATPPGYKPAPPATKKAPQGAAAAPPAHRQNEDNPELRNDNS 687
Query: 393 TAFLSNI--NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS--RGLAYVDF 440
+ F+SN+ L+ LR F G + IR + FTGK RG YV F
Sbjct: 688 SVFVSNLAYTLEEPEAKLRTLFETCGPIKQIRPI---FTGKGSFRGYGYVQF 736
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 18/173 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E L + G V +R++ + +GK +GLAYV+F D+ + AV K
Sbjct: 787 FISGLPFSCTKEQLAEICKNHGTVKEVRLVTYR-SGKPKGLAYVEFADETQASQAVLKLD 845
Query: 455 QMFL-GKKLSIARSNPKQRK--DSSGERAPTEQAQSHQQTGNAGTSASKESSIETS--KQ 509
+ + G K+S+A SNP +R D G PT A Q G G ++ S + S +Q
Sbjct: 846 GIEVEGNKISVAISNPPRRNATDKPGSSRPTGDAMPRQVYGARGKGRTQLSMLPRSLHRQ 905
Query: 510 SRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFI 562
S G K +N A G PA GE K SN +F KM +
Sbjct: 906 SAPAG-----KVENGSAAD------GEPASAAGNAAGEP-KQLSNSDFAKMLL 946
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 244/530 (46%), Gaps = 79/530 (14%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y+ Y+++E G+P R+Q +YERA+ D ++ LW +YT YLD+ LK+ VV
Sbjct: 189 AEAPKLTEYLAYIEHELKQGNPARIQCIYERALVDNCLNMSLWKEYTSYLDEHLKISTVV 248
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
VY RA +NCPW LW L++ R + VFEK+L+ FS+ +YL L+ T
Sbjct: 249 LPVYERAVRNCPWCFSLWQGYLIAQGRHEEPFTSVQAVFEKALVAGFSSAPDYLQLWQTY 308
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-KNTDGLLRLYAYWAHLEQSMG 196
D LRRRI + + E D + ++T +RA Y ++ D L Y A +E
Sbjct: 309 GDYLRRRIQW--DKEHADDVEIFKKTMERAIIYQAQYFDAEGDPSSSLQQYLAFVEAKYC 366
Query: 197 KDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED 255
++++ R +W ++ + A + W Y+++E R + R E
Sbjct: 367 QNVMRMRELWNDIMSMGHASQAQMWLQYVNLERRFGDAKHVRKTFHRAIHS--VSDWPES 424
Query: 256 ICHAWLRFEREYGTLEDFDHSVQKV---TPRLEELRLFRSQQESKSLPESADQ------- 305
+ A+L FERE GTL+ + +V++V R+ E R ++QES S + AD+
Sbjct: 425 VFEAFLNFEREEGTLDTWCAAVKRVETQMKRVTEQRNRAAEQES-SWSQQADERGSENRT 483
Query: 306 KEHSVKKTGR---------------EKRKS--------DSNISYEQSPAKRQKHA----- 337
K+ S +K G+ +K+ S D+ + E P+
Sbjct: 484 KQRSERKGGKRSFDEPGTSKQAFKKQKKNSLPDSNPRIDARVDGEAGPSTSSSSTSSSSS 543
Query: 338 -------------PQKPKK---VHDKEKRQVQNLA-----EENEGRET--KQTVEEQPKK 374
PQ P +D++ + V + E+ +E+ Q+VE Q
Sbjct: 544 SASSSSSAPVFKIPQLPAPRVGPNDEDLKPVSDRVKDIDMEDIPAKESLNDQSVEFQMAM 603
Query: 375 QPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRG 434
P K P R D T F+ N+ T + +R+ FS+ G V +R++ + + K +G
Sbjct: 604 NP-KKKKPERDN--NDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTN-YQKKFKG 659
Query: 435 LAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQ 484
YV+F D+E A+ K+++ + + + S KD SG AP E+
Sbjct: 660 YCYVEFEDEESAKKALKKDRETINDRPMYVDPS-----KDRSG--APAEK 702
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L + FS G + +RI+ K +G +GLAYVDF ++ AV
Sbjct: 716 FVSGLPRTLTTEELEKTFSKFGKLKGVRIVTFK-SGVPKGLAYVDFENEASATRAVMGLD 774
Query: 455 QMFLGK-KLSIARSNPKQRK 473
+G+ +++A SNP RK
Sbjct: 775 NTQIGEHTITVAISNPPTRK 794
>gi|440893379|gb|ELR46176.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Bos
grunniens mutus]
Length = 958
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 218/485 (44%), Gaps = 47/485 (9%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+SRA +NCPW LW R LL+LER IS FEK+L F +Y++++
Sbjct: 365 LSAHSRAVRNCPWTVALWSRYLLALERHGVEHRVISVTFEKALSAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRSAFARALEYLKQEVEERFSESGDPSCLIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKFANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR-----------SQQESKSLP 300
E +C L ER GTLED+D +VQK RL + R Q+E K
Sbjct: 541 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKAAEKEAALAQQEEEKVEQ 600
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQN----LA 356
+ E K ++ R +D + + E + ++P K +R+V+N
Sbjct: 601 RKRARAEKKALKKKQKTRGADKHRADEDDEKEWGDDEEEQPSK-----RRRVENSVPPAG 655
Query: 357 EENEGRETKQTVEEQPKK-QP---IKDAVPGRTK---------GFTDECTAFLSNINL-- 401
E G E + P +P +K+ G + D T F+SN+
Sbjct: 656 EAEPGSEADLSGSSAPAATEPPSELKEVRGGARRRDVPKVPHDSSKDGVTVFVSNLPYGR 715
Query: 402 -KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK 460
LR F G V +R + G RG YV+F ++ A+ ++Q G+
Sbjct: 716 GGPPAATLRPLFEACGDVVEVRPIFSN-RGDFRGYCYVEFREEAAALQALQLDRQSVEGR 774
Query: 461 KLSIA 465
+ ++
Sbjct: 775 PMFVS 779
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 805 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYENELQASQAVLKMD 863
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ S + + Q
Sbjct: 864 GMTIRENVIKVAISNPPQRKVPEKPEARKAPGSALLPRQVYGARGKGRTQLSLLPRALQ- 922
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
R + + +N A P PK SN +F K+ ++K
Sbjct: 923 --RPSAATAQAENGPATPATTE-------APKM---------SNADFAKLLLRK 958
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 226/506 (44%), Gaps = 60/506 (11%)
Query: 22 KFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLD-KTLKVGNVVRDV 80
+ Y+ Y+ YE + DP R+Q ++ERA+ + ++S+LWL Y +YLD K L+V +V +
Sbjct: 353 RLDAYLSYIDYEMTHDDPARIQNIFERALQENCLNSELWLKYAKYLDHKRLQVETLVLGM 412
Query: 81 YSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDG 140
Y R+ +NCPW +LW R +L++ER ++EI + +++L C F++ +YL ++ T D
Sbjct: 413 YERSVRNCPWCSQLWQRYVLAMERFHKPQKEIKELVDRALQCGFNSGADYLVVWSTYCDY 472
Query: 141 LRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMV 200
LRRRI ++ + E LD L R T + A ++L+ D L +WA +E +M
Sbjct: 473 LRRRIKWNQDHEEELD--LFRITIESAVNFLAYYGVEADPKGSLQQFWAVIEGKFCGNMT 530
Query: 201 SARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICH 258
AR +W ++ +G EA W Y+ +E R + R + E I
Sbjct: 531 RAREIWTEIMS-AGRNHEAALWLDYLRLERAYGDNKHCRKLLNRALN--VVTDWPEAIVE 587
Query: 259 AWLRFEREYGTLEDFDHSVQKVTPRLEEL----------------------RLFRSQQES 296
A + FERE G LE +D +V K ++ + + F ++Q+
Sbjct: 588 AMINFEREEGDLEQYDAAVTKCEVHMDAVNKERQEAEQEEKRQNRRIEKKQKRFDAKQKG 647
Query: 297 KSLPESADQKEHSVKKTGREKRKSDSN----ISYEQSPAKRQKHAPQKPKKVHDKEKRQV 352
K P + E S KK K + N +S E+ + P K
Sbjct: 648 KKGPGQKNDTEKSPKKVSEGKAGKNENRKRKVSQEEPNDFKVPEVPNSKGPPPPGFKEPP 707
Query: 353 QNLAEENEGRETKQTVE-------EQPKKQPIKDAVPGRTKG---------FTDEC---- 392
++ + E K+P D P G F ++
Sbjct: 708 PPTGQKGPPPPGFKGPPPPGYKGAEPATKKPKIDETPNNGAGGDGPTTHSDFVEKAEQDP 767
Query: 393 -----TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
T+F+SN++ + + + F+ G ++ IR++ GKS+G AYV+F D+ +
Sbjct: 768 DKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVK-TIKGKSKGYAYVEFKDELGVL 826
Query: 448 AAVAKNKQMFLGKKLSIARSNPKQRK 473
A+ ++ G+ + +++ + +K
Sbjct: 827 EALKLDRTPIEGRPMFVSKCEDRSQK 852
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N+ + + L + FS+ G V +R++ + +G +GLAYV+F D++ A AV K
Sbjct: 868 FIKNLPFTCSKDALIQIFSEHGPVKEVRMVTYR-SGAPKGLAYVEFEDEQDAAKAVMKTD 926
Query: 455 QMFLG-KKLSIARSNPKQR 472
+ +G ++ +A SNP QR
Sbjct: 927 GLKIGDHEIEVAISNPPQR 945
>gi|444723163|gb|ELW63824.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Tupaia
chinensis]
Length = 1050
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 215/478 (44%), Gaps = 60/478 (12%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 308 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 367
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 368 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISETFEKALNAGFIQATDYVEIWQAY 427
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGK 197
+D LRRR+ F ++ F + D M+N WA +E +
Sbjct: 428 LDYLRRRVDF-------------KQGFSESGDPSCMIMQN----------WARIEARLCN 464
Query: 198 DMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDI 256
+M AR +W+ ++ K + W Y ++E R R + + T E +
Sbjct: 465 NMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPEHV 522
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR----------SQQESKSLPESADQ- 305
C L ER GTLED+D +VQK RL + R +QQE E A+Q
Sbjct: 523 CEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRMKAAEKEAALAQQEE----EKAEQR 578
Query: 306 ---------KEHSVKKTGREKRKSDSN------ISYEQSPAKRQKHAPQKPKKVHDKEKR 350
+ K G +KRK+D + E+ P+KR++ P +
Sbjct: 579 KKARAEKKATKKKKKTRGIDKRKADEDEEKEWGDDEEEPPSKRRRVGNNVPLAGEAGDGD 638
Query: 351 QVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED-- 407
L + + +++ K +K VP + D T F+SN+ D
Sbjct: 639 ADLGLTGKCVAVDVDPPSKQKEKAASLKRDVPKVPHDSSKDSITVFVSNLPYSMAEPDAT 698
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 699 LRPLFEACGEVVEIRPIFSN-RGDFRGYCYVEFKEEKAALQALELDRKNVEGRPMFVS 755
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 891 FISGLPFSCTREELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 949
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK +AP Q G G ++ + + + Q
Sbjct: 950 GMTIKENVIKVAISNPPQRKVPEKPEARKAPGGPMVPRQIYGARGKGRTQLALLPRALQ- 1008
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
R + + +N P P + P T E K SN +F K+ ++K
Sbjct: 1009 --RPSAPATQAENG--------PASGP-VGPTTAAAEAPK-MSNADFAKLLLRK 1050
>gi|327289491|ref|XP_003229458.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Anolis carolinensis]
Length = 905
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 145/273 (53%), Gaps = 10/273 (3%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y Y+ +E GDP R+QL+YERA+ + + DLW YTQYLD+ LKV ++V
Sbjct: 252 AEAPKLAEYQAYIDFETKVGDPARIQLIYERALAENCLVPDLWARYTQYLDRQLKVKDLV 311
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW +LW + LL+LER +S FEK+L F +Y++++
Sbjct: 312 LSAHERAVRNCPWTVKLWNQYLLALERHHVEHARVSETFEKALNAGFIQATDYVEIWQAY 371
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F+ + L+ +R F +A +YL +++ ++ D + WA +E
Sbjct: 372 LDYLRRRVDFTKDSSKELEE--LRSAFAQAVEYLKQEVEERFSESGDPSCSIMQTWARIE 429
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 430 ARLCHNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTLHCRKALHR--AVQCTSD 487
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
E +C L ER GTLED+D +VQK RL
Sbjct: 488 YPEHVCDVLLTLERIEGTLEDWDAAVQKTESRL 520
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F++ + T E+L G V +R++ ++ G+S+G+AYV+F ++ + AV K
Sbjct: 752 FIAGLPFSYTKEELEELCKAHGTVKEVRLVTNR-AGRSKGMAYVEFENEAQASQAVLKMD 810
Query: 455 QMFLGKK-LSIARSNPKQRKDS-SGERAPTEQAQSHQQTGNAGT 496
+ + + +A SNP RK + ERAP QS+ G T
Sbjct: 811 GLAVNDYVIKVAISNPPARKQPEAAERAPQPPRQSYGARGKGRT 854
>gi|296478470|tpg|DAA20585.1| TPA: squamous cell carcinoma antigen recognized by T cells 3 [Bos
taurus]
Length = 656
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 144/273 (52%), Gaps = 10/273 (3%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+SRA +NCPW LW R LL+LER IS FEK+L F +Y++++
Sbjct: 365 LSAHSRAVRNCPWTVALWSRYLLALERHGVEHRVISVTFEKALSAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRSAFARALEYLKQEVEERFSESGDPSCLIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKFANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
E +C L ER GTLED+D +VQK RL
Sbjct: 541 YPEHVCEVLLTMERTEGTLEDWDIAVQKTETRL 573
>gi|345323818|ref|XP_001507791.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Ornithorhynchus anatinus]
Length = 1013
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 208/471 (44%), Gaps = 73/471 (15%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
++++ K +Y Y+ E +GDP R+QL++ERA+ + + DLW Y QYLD+ LK+ +
Sbjct: 268 VAETPKLAEYQTYIDLELKTGDPARIQLIFERALAENCLVPDLWARYNQYLDRQLKMKEL 327
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW R LL++ER +S FEK+L F +Y++++
Sbjct: 328 VLSAHDRAVRNCPWTVGLWNRYLLAMERHGVDHRLVSDNFEKALNAGFIQATDYVEIWQA 387
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ F + L+ +R F RA DYL +++ ++ D + WA +
Sbjct: 388 YLDYLRRRVDFKQDSSKELEE--LRSAFARALDYLKQEVEERFSESGDPSCTIMQNWARI 445
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E +M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 446 EARQCNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTS 503
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL-----EELRLFRSQQESKSLPE--SA 303
E +C L ER GTLED+D +VQK RL + ++ +S SK L E SA
Sbjct: 504 DYPEHVCEVLLTLERIEGTLEDWDVAVQKTENRLARVNEQRVKTIKSVDSSKELEELRSA 563
Query: 304 DQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRE 363
+ K E+RK + +P H P K RQ N+ + E
Sbjct: 564 FARALDYLKQEVEERKLP---FFSFTP-----HTPNSVLKTSGGVARQCNNMQKARE--- 612
Query: 364 TKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
+ D++ TKG +L NL+ T
Sbjct: 613 -------------LWDSI--MTKGNAKYANMWLEYYNLERT------------------- 638
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK-LSIARSNPKQRK 473
GLAYV++ ++ + AV K M + + + +A SNP QRK
Sbjct: 639 ----------GLAYVEYENEAQASQAVLKMDGMTVKQNTIKVAISNPPQRK 679
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 857 FISGLPFSCTKEELEEICQAHGTVKDLRLVTNR-AGKPKGLAYVEYENEAQASQAVLKMD 915
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 916 GMTVKQNTIKVAISNPPQRK 935
>gi|26343775|dbj|BAC35544.1| unnamed protein product [Mus musculus]
Length = 612
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 164/310 (52%), Gaps = 14/310 (4%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V+SRA +NCPW LW R LL++ER + IS FE +L F +Y++++
Sbjct: 366 LSVHSRAVRNCPWTVALWSRYLLAMERHGLDHQTISATFENALSAGFIQATDYVEIWQVY 425
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 426 LDYLRRRVDFRQDSSKELEE--LRSMFTRALEYLQQEVEERFSESGDPSCLIMQSWARVE 483
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 484 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 541
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEH 308
E +C L ER GTLED+D ++QK RL E R+ +++E+ +L + ++K
Sbjct: 542 YPEHVCEVLLTMERTEGTLEDWDLAIQKTETRLARVNEQRMKAAEKEA-ALVQQEEEKAE 600
Query: 309 SVKKTGREKR 318
KK EK+
Sbjct: 601 QRKKVRAEKK 610
>gi|145337883|gb|AAI39590.1| Sart3 protein [Danio rerio]
Length = 623
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 13/311 (4%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+S+ K +Y Y+ +E GDP RVQ+++ERA+ + + DLW+ YT YLD+ LK+ ++
Sbjct: 285 VSEPPKLAEYQSYIDFEIKEGDPARVQIIFERALAENCLVPDLWIKYTTYLDRQLKIKDL 344
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A + + VFEK+L F +Y++++ +
Sbjct: 345 VLSAHERAVRNCPWTMGLWKSYLLALERHGADHQTVKDVFEKALNAGFIQATDYVEIWQS 404
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E LD +R F R+ +YL + + ++ D L WA +
Sbjct: 405 YLDYLRRRVDFSKEWSRELDE--LRAAFSRSLEYLKQDVEERFSESGDLSCTLMQIWARI 462
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E K+M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 463 EALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERSYGDAAHCRKALHR--AVQCTS 520
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV 310
E +C L FER G+LED+D +VQK +L + R++ K E+ ++
Sbjct: 521 DYPEHVCDVLLNFERVEGSLEDWDAAVQKTETKLNRVCEQRARVAEK---EALHARQEEE 577
Query: 311 KKTGREKRKSD 321
K R K K+D
Sbjct: 578 KAEQRRKVKAD 588
>gi|62020925|gb|AAH32601.1| SART3 protein [Homo sapiens]
gi|75515400|gb|AAI03707.1| SART3 protein [Homo sapiens]
Length = 615
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 146/273 (53%), Gaps = 10/273 (3%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 424
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 425 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 482
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 483 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 540
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
E +C L ER G+LED+D +VQK RL
Sbjct: 541 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRL 573
>gi|328697639|ref|XP_001946245.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Acyrthosiphon pisum]
Length = 854
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 214/473 (45%), Gaps = 40/473 (8%)
Query: 21 EKFQQYMIYLKYEQSSGD-PGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRD 79
E +++Y+ + K + G+ P R+ LYERAI D P++ LW DY Y+ T+K + +
Sbjct: 260 ESYEEYIRWEKNPKEGGNKPSRIICLYERAIADIPLTQTLWADYIDYIVVTIKEADFILA 319
Query: 80 VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRID 139
R+ NC W +LW+ L E + S EEI+ + EK+L FS+ EY L+L+ I
Sbjct: 320 TCKRSVDNCTWSSDLWIIYLTQAEANNQSHEEITAIMEKALSSWFSSPAEYRSLYLSYIF 379
Query: 140 GLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYWAHLEQSMGKD 198
LRRR+ + + IR ++ +L E + D L +W E + D
Sbjct: 380 YLRRRLNNTDAETKLKRIEDIRSMLEQGQKFLLESYGYSGDPNCELLLWWTDFEAIITGD 439
Query: 199 MVSARGVWERLLKISGAMLEA-WQSYISMEIELDHINEARSIYKRCYSKRFTGTG-SEDI 256
M R +W +L + W YI++EI+ R I+ R T T E I
Sbjct: 440 MERVRNMWNEILNAGLNQYSSYWMKYINIEIQFGDQKHVRKIFARAL---MTNTDLPETI 496
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGRE 316
W+R+E YG L+ + +K ++++ V++T +
Sbjct: 497 GTEWIRYETLYGDLDTLLNCKEKYKTKMKQ-----------------------VQETHEK 533
Query: 317 KRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQP 376
K+++ I ++ AK++K ++P K H+++ N + KQ E P K+
Sbjct: 534 DPKTENKIGTKEKEAKKRKWDEKEPTKTHNEKSN--GNFKVPYAKNDNKQESESSPVKKF 591
Query: 377 IKDAVPGRTKGFTDEC------TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG 430
+ G E + F+SN++ T +++ S VG + ++ D F G
Sbjct: 592 KTTEINLDKGGRHMEVEGKENRSVFVSNLDFAVTELEVKDALSSVGHC-EVLLVRD-FKG 649
Query: 431 KSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTE 483
+S+G YV F E + A+ K+++ + + +++ P ++ SSG R PTE
Sbjct: 650 RSKGFGYVLFEKPEMVEEALKKDRESVNNRPMFVSKCQPDKQSRSSGLRFPTE 702
>gi|328697641|ref|XP_003240396.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Acyrthosiphon pisum]
Length = 854
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 214/473 (45%), Gaps = 40/473 (8%)
Query: 21 EKFQQYMIYLKYEQSSGD-PGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRD 79
E +++Y+ + K + G+ P R+ LYERAI D P++ LW DY Y+ T+K + +
Sbjct: 260 ESYEEYIRWEKNPKEGGNKPSRIICLYERAIADIPLTQTLWADYIDYIVVTIKEADFILA 319
Query: 80 VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRID 139
R+ NC W +LW+ L E + S EEI+ + EK+L FS+ EY L+L+ I
Sbjct: 320 TCKRSVDNCTWSSDLWIIYLTQAEANNQSHEEITAIMEKALSSWFSSPAEYRSLYLSYIF 379
Query: 140 GLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYWAHLEQSMGKD 198
LRRR+ + + IR ++ +L E + D L +W E + D
Sbjct: 380 YLRRRLNNTDAETKLKRIEDIRSMLEQGQKFLLESYGYSGDPNCELLLWWTDFEAIITGD 439
Query: 199 MVSARGVWERLLKISGAMLEA-WQSYISMEIELDHINEARSIYKRCYSKRFTGTG-SEDI 256
M R +W +L + W YI++EI+ R I+ R T T E I
Sbjct: 440 MERVRNMWNEILNAGLNQYSSYWMKYINIEIQFGDQKHVRKIFARAL---MTNTDLPETI 496
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGRE 316
W+R+E YG L+ + +K ++++ V++T +
Sbjct: 497 GTEWIRYETLYGDLDTLLNCKEKYKTKMKQ-----------------------VQETHEK 533
Query: 317 KRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQP 376
K+++ I ++ AK++K ++P K H+++ N + KQ E P K+
Sbjct: 534 DPKTENKIGTKEKEAKKRKWDEKEPTKTHNEKSN--GNFKVPYAKNDNKQESESSPVKKF 591
Query: 377 IKDAVPGRTKGFTDEC------TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG 430
+ G E + F+SN++ T +++ S VG + ++ D F G
Sbjct: 592 KTTEINLDKGGRHMEVEGKENRSVFVSNLDFAVTELEVKDALSSVGHC-EVLLVRD-FKG 649
Query: 431 KSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTE 483
+S+G YV F E + A+ K+++ + + +++ P ++ SSG R PTE
Sbjct: 650 RSKGFGYVLFEKPEMVEEALKKDRESVNNRPMFVSKCQPDKQSRSSGLRFPTE 702
>gi|194388388|dbj|BAG65578.1| unnamed protein product [Homo sapiens]
Length = 699
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 146/273 (53%), Gaps = 10/273 (3%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 253 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 312
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
V++RA +NCPW LW R LL++ER + IS FEK+L F +Y++++
Sbjct: 313 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAY 372
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F + L+ +R F RA +YL +++ ++ D + WA +E
Sbjct: 373 LDYLRRRVDFKQDSSKELEE--LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIE 430
Query: 193 QSMGKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+ +M AR +W+ ++ A W Y ++E R R + + T
Sbjct: 431 ARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSD 488
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
E +C L ER G+LED+D +VQK RL
Sbjct: 489 YPEHVCEVLLTMERTEGSLEDWDIAVQKTETRL 521
>gi|133777384|gb|AAI15051.1| Sart3 protein [Danio rerio]
Length = 587
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 146/274 (53%), Gaps = 10/274 (3%)
Query: 17 LSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV 76
+S+ K +Y Y+ +E GDP RVQ+++ERA+ + + DLW+ YT YLD+ LK+ ++
Sbjct: 285 VSEPPKLAEYQSYMDFEIKEGDPARVQIIFERALAENCLVPDLWIKYTTYLDRQLKIKDL 344
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
V + RA +NCPW LW LL+LER A + + VFEK+L F +Y++++ +
Sbjct: 345 VLSAHERAVRNCPWTMGLWKSYLLALERHGADHQTVKDVFEKALNAGFIQATDYVEIWQS 404
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHL 191
+D LRRR+ FS E LD +R F R+ +YL + + ++ D L WA +
Sbjct: 405 YLDYLRRRVDFSKEWSRELDE--LRAAFSRSLEYLKQDVEERFSESGDLSCTLMQIWARI 462
Query: 192 EQSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
E K+M AR +W+ ++ K + W Y ++E R R + + T
Sbjct: 463 EALHCKNMQKARELWDSIMTKGNAKYANMWLEYYNLERPYGDAAHCRKALHR--AVQCTS 520
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRL 284
E +C L FER G+LED+D +VQK +L
Sbjct: 521 DYPEHVCDVLLNFERVEGSLEDWDAAVQKTETKL 554
>gi|47226485|emb|CAG08501.1| unnamed protein product [Tetraodon nigroviridis]
Length = 909
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 201/463 (43%), Gaps = 56/463 (12%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
++ K +Y Y+ +E GDP R+Q+++ER + + + D+W YT YLD+ LK+ ++V
Sbjct: 282 AEPPKLAEYQAYIDFELKEGDPARIQIIFERTLAENCLVPDMWAKYTTYLDRQLKIKDLV 341
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW LW LL+LER A +S VFEK+L F +Y++++
Sbjct: 342 LSTHDRAVRNCPWTMGLWKSYLLALERHEADHPTVSDVFEKALNAGFIQATDYVEIWQAY 401
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGK 197
+D LRRR+ FS + F + D M+ WA +E K
Sbjct: 402 LDYLRRRVDFS-------------KGFGESGDPSCAIMQ----------IWAKIEALHCK 438
Query: 198 DMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDI 256
+M AR +W+ ++ K + W Y ++E R R + + T E +
Sbjct: 439 NMQKARELWDTIMTKGNAKYANMWMEYYNLERSYGDSVHCRKALHR--AVQCTSDYPEHV 496
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRL------------EELRLFRSQQESKSLPESAD 304
C L FER G+LED+D +VQK RL +E + R +++ A
Sbjct: 497 CEVLLAFERVEGSLEDWDLAVQKTETRLNRVNEQRAKVAEKEATVARQEEDRAEQRRKAK 556
Query: 305 QKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEG--- 361
++ + KK G++ R + + + Q K+ E + + E G
Sbjct: 557 SEKKAQKKMGKDVRAGEKRKAQQDYEDNWNDGTEQASKRHRGNEDQTAEEQMETEAGLFG 616
Query: 362 -------RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNI--NLKATYEDLRRFF 412
++ +Q V P+KQ KD P D + F+SN+ L+ LR F
Sbjct: 617 RNAPPGFKKPQQAVAAAPQKQ--KDDKPELR---NDNNSVFISNLAYTLEEPEAKLRTMF 671
Query: 413 SDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
G + IR + G +G Y+ F +A A+ ++Q
Sbjct: 672 EPCGPIKQIRPVFST-KGTFKGYCYIQFESVASVAEALKLDRQ 713
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E L+ G + +R++ + +GK +GLAYV+F ++ H + AV K
Sbjct: 749 FISGLPFSCTKEQLKEVCKSYGTIKDVRLVTYR-SGKPKGLAYVEFTEETHASQAVLKMD 807
Query: 455 QMFL-GKKLSIARSNPKQRK--DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
M + G +S+A SNP +R D G P + +S Q G G ++ S + S R
Sbjct: 808 GMVIDGNTISVAISNPPRRNVMDKPGAGRPMD-LKSRQAYGARGKGRTQLSMVPRSLH-R 865
Query: 512 GRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
Q++ + A P PA + E+ KP SN +F +M + K
Sbjct: 866 QNLPLKQVENGTSAAQP--------PASASTSATAEN-KPLSNSDFARMLLNK 909
>gi|163915611|gb|AAI57502.1| LOC100137683 protein [Xenopus laevis]
Length = 590
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 10/286 (3%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ K +Y Y+ +E ++GDP R+QL++ERA+ + + DLW YTQYLD+ LKV ++V
Sbjct: 280 AETPKLAEYQAYIDFEMNAGDPARIQLIFERALVENCLVPDLWARYTQYLDRQLKVKDLV 339
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
+ RA +NCPW +LW R +L++ER ++ FEK+L F +Y++++
Sbjct: 340 LSAHDRAARNCPWTVDLWKRYILAMERHGVDHNIVTDNFEKALNAGFIQATDYVEIWQYY 399
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLE 192
+D LRRR+ F+ + L+ +R F RA DYL +++ ++ D + WA +E
Sbjct: 400 LDYLRRRVDFTKDSSKELEE--LRSVFVRALDYLKQEVEERFGESGDPSCSIMQNWAKIE 457
Query: 193 QSMGKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGT 251
+M AR +W+ ++ + + W Y ++E I R R + + T
Sbjct: 458 ARHCNNMQKARELWDSIMTRGNSRFANMWLEYYNLERAHGDIQHCRKALHR--AVQCTTD 515
Query: 252 GSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESK 297
E +C L ER G+LED+D +V K RL ++ R++ K
Sbjct: 516 YPEHVCEVLLSLERIEGSLEDWDSAVLKTENRLSRVKEQRAKAAEK 561
>gi|242003014|ref|XP_002422579.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
gi|212505369|gb|EEB09841.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
Length = 858
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 238/464 (51%), Gaps = 29/464 (6%)
Query: 29 YLKYEQS-SGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKN 87
Y++YE+S G P RVQ LYER + + ++ ++WL+Y Y+D L++ +V+ + RA +N
Sbjct: 237 YIEYEKSKEGSPVRVQFLYERFLCENCLNEEMWLEYINYVDGVLQIPDVLFKICKRAVRN 296
Query: 88 CPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILF 147
CPW +++ + LE+ + + ++I+ E + T ++ D++LT ++ LRRR
Sbjct: 297 CPWCCKIYQVYIKCLEKYKKTHKDIT---EDAFNSGLQTATDFRDIWLTYLEYLRRRFDV 353
Query: 148 S-GEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVW 206
S + E +R F +A D+L +N D + +WA +E K+M +R +W
Sbjct: 354 SENQEEEEKRLKELRAGFSKALDFL---FQNADPGYSVGQFWARIEAIYCKNMDKSRELW 410
Query: 207 ERLLKISGAML-EAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFER 265
+L + W YI +E R ++ R + + T E I ++WL +ER
Sbjct: 411 NVILSDEKCKTSDMWLEYIHLERAFGDSKHLRKLFPR--ALQGTNDWPEVIANSWLNYER 468
Query: 266 EYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESA--DQKEHSVKKTGREKRKSDSN 323
+ GTLE ++ +K++ +L E+ R + +++ E+ DQ++ VK +G K K++ N
Sbjct: 469 DEGTLESMENCTKKISIKLTEINDKREKLAAENSTENIIYDQQKKKVKFSGSSK-KNEQN 527
Query: 324 ISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG 383
+ + K +K + K K H++E + N + + + +E ++ E K I + G
Sbjct: 528 KNMSKIEYKDKKISNFKRK--HEEE--ETNNGSPKKKSKENEEEEESNNKNDFIDKLLRG 583
Query: 384 RTK---GFT-------DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
+K G T D T F+SN++ + +R FS G ++ +R++ D + G+S+
Sbjct: 584 ESKTAHGETVVHQSSKDHRTVFVSNLDFTTEEDVIRETFSCCGEITDLRLVRD-YKGRSK 642
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
G YV+F A A+ K++++ G+ + +++ +P + S G
Sbjct: 643 GYCYVEFEKSVEAARALKKDRELINGRPMFVSKCDPDKETRSGG 686
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
F+ + T EDL+ FS G + +R++ + G S+GLAYV+F D+ A AV + +
Sbjct: 699 FVRGLPFSTTVEDLKTLFSKFGSLKDVRLVTYR-NGHSKGLAYVEFEDEASAAQAVLSTD 757
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG 492
K++S+A SNP +RK GE + +Q + G
Sbjct: 758 GTTIENKQISVAISNPPERK---GETSLLQQNKGVVSLG 793
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 7 HLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQ- 65
+LE I+ + +Q Y+ +K + GD R++ + +R + FP+S +LW+D+ Q
Sbjct: 32 NLENMIAENKFA----YQPYLDLIKTFKDLGDLDRLRCVRKRMASQFPLSPELWIDWIQD 87
Query: 66 --YLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEE------ISTVFE 117
+ + + + +++ A K+ V ELW++ + S SEE I VFE
Sbjct: 88 EINIAVSCEEKKEIINLFKSAVKDYLSV-ELWLQ-YTTFCISFHSEENSIDATFIKNVFE 145
Query: 118 KSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN 177
+ L A + L+ + ID + IL S V+ +I ++R LS + N
Sbjct: 146 EGLTAAGLHVTQGSKLWKSYID-YEKSILKSISVK------VIANLYKRQ---LSCPLLN 195
Query: 178 TDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISME 227
+ + W +S+ + + + V + S +L+ W++YI E
Sbjct: 196 MEQTFEAFNCWLEENESLFSEKIIDKSVISK----SEDLLDVWKNYIEYE 241
>gi|332020337|gb|EGI60759.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Acromyrmex
echinatior]
Length = 903
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/472 (26%), Positives = 219/472 (46%), Gaps = 42/472 (8%)
Query: 23 FQQYMIYLKYEQSSGDPGRVQLLYERAITDFP-VSSDLWLDYTQYLDKTLKVGNVVRDVY 81
++ Y++Y+K Q++ D +++LYERAITD + + +WLDY YL+ ++ + +Y
Sbjct: 294 YKGYLLYMK--QNNSD--LIRILYERAITDLNYLETSIWLDYIAYLENESRLERELDPIY 349
Query: 82 SRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGL 141
RA++N PW +W + + S E+ EI T+FE +L FST E+Y +L++ ++ L
Sbjct: 350 QRASRNIPWCSIVWQKWMRSYEKWDKHISEIQTLFENALSAGFSTAEDYRNLWIMYLECL 409
Query: 142 RRRI--LFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGLLRLYAYWAHLEQSMGKD 198
RRR+ E + LD +IR+TF RA ++L++ + D + YWA E +
Sbjct: 410 RRRLDQYPDEERDKYLD--VIRKTFNRACEHLAKYFGLDGDPNCVILQYWARFEAIQADN 467
Query: 199 MVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDIC 257
M R +W +L + A W YI +E R +Y++ S T E I
Sbjct: 468 MEQTRRLWADILSQEHSATASYWLEYIILEKSYGDSKHLRKLYQKALSS--TQDWPESIA 525
Query: 258 HAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREK 317
++W+ FER+ GTLE + K +L+++ R + + S E + Q K K
Sbjct: 526 NSWIDFERDKGTLEQMEFCEAKTKEKLDKIMTERQKAQDLSQSELSTQ-----DKKMTSK 580
Query: 318 RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPI 377
RK D + K+ P K+ + R L N K+T +Q K +P
Sbjct: 581 RKIDDG---------KWKNLGSSPSKIVKTDVRLKPKL-RANILNTDKKTTNDQKKSKPE 630
Query: 378 KDAVPG-------------RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL 424
PG D T F+SN++ T +++R + ++ R++
Sbjct: 631 VVPPPGFKMIEDEDIDDKDSQHEVDDSITIFVSNLDYTTTEDEVRDVLKSIEPITLFRMI 690
Query: 425 HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
D + G+S+G Y+ E + A+ ++ G+ + I++ + + SS
Sbjct: 691 KD-YKGRSKGYCYIQLSSTEAVKEALKLDRTPIKGRPMFISKCDSNKNTRSS 741
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 24/171 (14%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + L T E L F G + +R++ + G S+GLAYV++ D+ A A+
Sbjct: 755 FVKGLPLTMTKEKLEEIFKVHGDLKEVRLVTYR-NGHSKGLAYVEYHDEATAAKALLSTD 813
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M + K +++A S P RK T Q +S GTS TS+ + G
Sbjct: 814 GMKIQDKVINVAISQPPDRKKIQNPEENTGQVKSL-----GGTS--------TSRTAFGV 860
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ VPRNV+ P G + SN +FR MF+ K
Sbjct: 861 PKIL------LSMVPRNVKKSNNGGAAPN---GNHTQSMSNQDFRIMFLNK 902
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 224/482 (46%), Gaps = 49/482 (10%)
Query: 26 YMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRAT 85
Y+ YL++EQS GDP R+Q LYERA+ + +DLW Y YLD LKV +V + R+
Sbjct: 270 YLPYLEWEQSQGDPARIQCLYERALAQHCLVADLWERYMAYLDNQLKVESVSLPCHERSV 329
Query: 86 KNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRI 145
+NCPW LW L +LERS A+ ++ E++L FS ++Y L+L +D LRRRI
Sbjct: 330 RNCPWSANLWASYLKALERSHAAHSKVKEAMEQALQAGFSQGQDYQRLWLAFLDYLRRRI 389
Query: 146 -LFSGEVEGVLDYSL--IRETFQRASDYLSEQMKNTDGLL--RLYAYWAHLEQSMGKDMV 200
S + + +L L +R FQ+A ++L Q +T+G + + YWA +E + ++
Sbjct: 390 EAHSAQGDELLAPYLEDLRAAFQKAVEHLL-QYASTEGDVCGPVLKYWAKVEAKVCHNLP 448
Query: 201 SARGVWERLLKISGAM-LEAWQSYISMEIEL-DHINEARSIYKRCYSKRFTGTGSEDICH 258
AR +W + A + W Y + E D + + +++ Y+ E +
Sbjct: 449 RARELWNDITNQGRATDAQTWLDYANFERTFGDDKHYRKVLFRGMYA---AVDWPETLGD 505
Query: 259 AWLRFEREYGTLEDFDHSVQKVTPRLEEL------------RLFRSQQESKSLPESADQK 306
L FERE GTLE D + +K + + Q+ K + + +
Sbjct: 506 LLLLFEREEGTLETLDTATEKYEAHMRRVLDKREKAAARDAAREAEQEAQKKMHRAEKKA 565
Query: 307 EHSVKKTGREKRKSDSNISYEQSPAKRQKHA------PQKPKKVHDKEKRQVQNLAEENE 360
E ++ ++R++++ + ++P + ++ A P ++ DK+ +V ++
Sbjct: 566 EKKAERQAEKRREAEAKVFQRETPGQAKRKAQPPEEPPDPQEQATDKDGFKVPSVPAAK- 624
Query: 361 GRETKQTVEEQPKKQPIKDAVPG--------------RTKGFTDECTAFLSNINLKATYE 406
VEE P K+ + + + T FLSN+
Sbjct: 625 ----ATAVEEPPSKKQKTEGEEQGEEKKEKPKHGEVVKPDPLKEIRTVFLSNLAYDVEES 680
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIAR 466
+ F +VG + +R++ D + G+S+G Y+ F + + AA+ +++ G+ + +++
Sbjct: 681 QIEEAFKEVGEIEELRLVRD-YKGRSKGFGYLVFTHMQSVEAALKRDRTPVNGRPVFVSK 739
Query: 467 SN 468
N
Sbjct: 740 CN 741
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 11/180 (6%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I T ++L F G + +R++ + G S+G+AYV++ ++ A+ +
Sbjct: 758 FVKGIPFSVTEKELEELFGKYGELKGVRLVTYR-NGHSKGIAYVEYANETSATVALVQTD 816
Query: 455 QMFLG-KKLSIARSNPKQRK-DSSGERAPTEQAQSHQQTGNAGTSASKESSI-ETSKQSR 511
M +G L +A SNP R G+ E Q Q A AS ET + R
Sbjct: 817 GMAMGDHTLQVAISNPPARGYRQQGKEGAAEDGQQRTQYPLASQVASLGGGPKETGLRGR 876
Query: 512 GRGDSV----QLKGKNTFAVPRNVRPLGFPAIKPKTEEG---EDLKPKSNDEFRKMFIKK 564
GR L+ +++ AV + P +P G E K SN++FR M +KK
Sbjct: 877 GRTQVALMPRALQQRSSTAVAKKPEPKREQQEQPMEVSGSSSEGAKGLSNEDFRSMLLKK 936
>gi|219362993|ref|NP_001136559.1| uncharacterized protein LOC100216679 [Zea mays]
gi|194696168|gb|ACF82168.1| unknown [Zea mays]
Length = 280
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 162/298 (54%), Gaps = 43/298 (14%)
Query: 290 FRSQQESK--SLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDK 347
F+SQ+E+K + P D +S +KRK +N +Q PAK++K P K D
Sbjct: 3 FKSQEEAKVEAYPNLND---NSNANDSSQKRKPSNN--KQQPPAKKRKENPPKSTMPSDD 57
Query: 348 EKRQVQN-----LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKG-------FTDECTAF 395
+ VQ+ + + G +++ V + + D+ G++ + D CT F
Sbjct: 58 QGSNVQSGHSGAVTDVEVGGASREKVMASIEMKVDSDSRTGKSSSNEPKPSFYNDNCTVF 117
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+LKA +DLRRFFSD+GG ++IR+L D+FT KSRGLAYVDF D++HL AA+ KNKQ
Sbjct: 118 VSNIDLKANEDDLRRFFSDIGGATAIRLLRDRFTKKSRGLAYVDFSDNKHLEAAIKKNKQ 177
Query: 456 MFLGKKLSIARSNPKQRKDS------SGERAPTEQAQSHQQTGNAGTSASKESSIETSKQ 509
LGKK+SIARS+P + K S S + P + TG++G
Sbjct: 178 KLLGKKVSIARSDPSKGKKSREAGQTSQDNLPPSGGDDAKATGSSGPD-----------N 226
Query: 510 SRGRGDSVQLKGKNTFAVPRN-VRPLGFPAIKPKTEEGEDLKP--KSNDEFRKMFIKK 564
+GD+ + GKNT PR V+PLG+ K E+ D+ KSN+EFR + +KK
Sbjct: 227 EVPKGDAKTI-GKNTLFAPRALVKPLGWTN---KDEKKPDVAGELKSNEEFRNLLLKK 280
>gi|427791903|gb|JAA61403.1| Putative rna-binding protein sart3 rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 598
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 229/504 (45%), Gaps = 64/504 (12%)
Query: 26 YMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRAT 85
Y+ YL++EQS GDP R+Q LYERA++ + +DLW Y YLD LKV +V + R+
Sbjct: 17 YLPYLEWEQSQGDPARIQCLYERALSQHCLVADLWERYMAYLDNQLKVESVSLPCHERSV 76
Query: 86 KNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRI 145
+NCPW LW L +LERS A+ ++ E++L FS ++Y L+L +D LRRRI
Sbjct: 77 RNCPWSANLWASYLKALERSHAAHSKVKEAMEQALQAGFSQGQDYQRLWLAFLDYLRRRI 136
Query: 146 -LFSGEVEGVLDYSL--IRETFQRASDYLSEQMKNTDGLL--RLYAYWAHLEQSMGKDMV 200
S + + +L L +R FQ+A ++L Q +T+G + + YWA +E + ++
Sbjct: 137 EAHSAQGDELLAPYLEDLRAAFQKAVEHLL-QYASTEGDVCGPVLKYWAKVEAKVCHNLP 195
Query: 201 SARGVWERLLKISGAM-LEAWQSYISME------------IELDHINEARSIYKRCYSKR 247
AR +W + A + W Y + E LD+ N R+ + ++
Sbjct: 196 RARELWNDITNQGRATDAQTWLDYANFERTFGDDKHYRXQTWLDYANFERTFGDDKHYRK 255
Query: 248 FTGTG-------SEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEEL------------R 288
G E + L FERE GTLE D + +K + +
Sbjct: 256 VLFRGMYAAVDWPETLGDLLLLFEREEGTLETLDTATEKYEAHMRRVLDKREKAAARDAA 315
Query: 289 LFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHA------PQKPK 342
Q+ K + + + E ++ ++R++++ + ++P + ++ A P +
Sbjct: 316 REAEQEAQKKMHRAEKKAEKKAERQAEKRREAEAKVFQRETPGQAKRKAQPPEEPPDPQE 375
Query: 343 KVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG--------------RTKGF 388
+ DK+ +V ++ VEE P K+ + +
Sbjct: 376 QATDKDGFKVPSVPAAK-----ATAVEEPPSKKQKTEGEEQGEEKKEKPKHGEVVKPDPL 430
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
+ T FLSN+ + F +VG + +R++ D + G+S+G Y+ F + + A
Sbjct: 431 KEIRTVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRD-YKGRSKGFGYLVFTHMQSVEA 489
Query: 449 AVAKNKQMFLGKKLSIARSNPKQR 472
A+ +++ G+ + +++ N + +
Sbjct: 490 ALKRDRTPVNGRPVFVSKCNERNQ 513
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 233/537 (43%), Gaps = 108/537 (20%)
Query: 15 QDLSDSE--KFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLK 72
Q L DSE +Y YL++E +G P +V +L+ERAI D + DLW Y Y K L+
Sbjct: 286 QSLVDSEFPHLAEYSNYLQHEIDAGKPEQVVVLFERAIKDNCLVGDLWQLYLDYATKHLQ 345
Query: 73 VGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLD 132
V + SRA +NCPW+ LWV +L LERS ++ + E +LL FST +YL+
Sbjct: 346 -PEAVEQIVSRALRNCPWISGLWVTRMLWLERSHSNIALVEEALESALLAGFSTPGDYLE 404
Query: 133 LFLTRIDGLRRRIL--------------------------------FSGEVEGVLDYSL- 159
L+ ID +RR+I ++G G S
Sbjct: 405 LWRCFIDIVRRQITPEVWDKLRADGIQPQQSASDAAQPEVTSSTPAYAGRGRGGWTTSTQ 464
Query: 160 --------------IRETFQRASDYLSEQM-KNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ TF+RAS YL + +N D L Y +++ ++ AR
Sbjct: 465 AAAADDGLPPAVSKLFRTFERASAYLQQYFGENGDPYCSLLQYQINIQLYRLGNLTEARK 524
Query: 205 VWERLLKISGAMLEA--WQSYISME-IELDHINEARSIYKRCYSKRFTGTGSEDICHAWL 261
+W+ ++K S A W +Y + E + + AR Y+R +R T + AW
Sbjct: 525 LWKAIMKTSNCAYSAAMWIAYANFERTQAKNSQSAREAYQRGL-QRDTLDDPNQLLSAWH 583
Query: 262 RFEREYGTLED-FDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKS 320
FERE D F H VQ R + LR SK A Q + + GR+
Sbjct: 584 EFEREESPSADAFAHVVQ----RCDTLR-------SKFNIRLARQLQQQQLREGRK---- 628
Query: 321 DSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDA 380
+QS KR EKR+V AE+N T + + K+Q +D+
Sbjct: 629 -----LQQSAEKR--------------EKRRVDGGAEDNG--LTALLSDARVKRQ--RDS 665
Query: 381 VPGRTKGFT-----------DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFT 429
+ FT D T F+SN++ KAT E +R F +G + +R++ K T
Sbjct: 666 DDAQAPRFTLPEKHAHDVSKDPVTVFVSNLDFKATEEMIRSQFEQIGNIVDVRLVR-KPT 724
Query: 430 GKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQ 486
G+SRG +V+F E A+A ++Q L + + ++ S K KD G AP+ AQ
Sbjct: 725 GRSRGYGFVEFSSPEAAQKALALDRQPVLNRPMYVSPSVDKP-KDGDGP-APSRYAQ 779
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D T F+ N++ +DL F V +R+ + G+ G AYV+F ++E
Sbjct: 782 VDPKTLFVRNLSSLCRRDDLVTTFEKFAKVVDVRMTRHR-DGRFTGRAYVEFANEEDAKL 840
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
A+A + + G+ +S NP K ++ E + A SH + ++ + SK
Sbjct: 841 ALAADGTVVRGQPISAQVCNPPT-KAAASETPAQDNADSHAMPPPSSFGTARPDTF--SK 897
Query: 509 QSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIK 540
+ + ++ A P LGF + K
Sbjct: 898 RPASTATTKSFVPRSLHAAPSRRLGLGFSSAK 929
>gi|42733488|dbj|BAD11341.1| BRI1-KD interacting protein 113 [Oryza sativa Japonica Group]
Length = 270
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 120/182 (65%), Gaps = 17/182 (9%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
++D+CTA++SNI+L A E +RRFFSD+GGV++IR+L DKFT KSRG+AYVDF D+EHL
Sbjct: 101 YSDKCTAYMSNIDLTANEEHIRRFFSDIGGVTAIRLLRDKFTKKSRGIAYVDFSDNEHLE 160
Query: 448 AAVAKNKQMFLGKKLSIARSNP-KQRKDSSGERAPTEQAQSHQQTGNAGTSA--SKESSI 504
AA+ KNK L KK+S+ARS+P K +K+ +QA S G+ G +A +
Sbjct: 161 AAIRKNKHKLLAKKVSVARSDPSKGKKNREAGSFSKDQATS----GDRGETAEFANRPDK 216
Query: 505 ETSKQSRGRGDSVQLKGKNTFAVPRN-VRPLGFPAIKPKTEEG-EDLKPKSNDEFRKMFI 562
E K D + GKNTFA PR+ V+PLG+ K++ G E+L KSN+EFR + +
Sbjct: 217 EIPK------DKPTITGKNTFAAPRSVVKPLGWTQKDEKSDVGAEEL--KSNEEFRNLLL 268
Query: 563 KK 564
KK
Sbjct: 269 KK 270
>gi|410977029|ref|XP_003994915.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Felis catus]
Length = 928
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 214/477 (44%), Gaps = 68/477 (14%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP RVQL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 306 AEAPRLAEYQAYIDFEMKIGDPARVQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 365
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 366 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRSAFTRALEYL---- 421
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 422 ------------KQEVE---------ERFNESGDPSCMIMQN----------WARIEARL 450
Query: 196 GKDMVSARGVWERLL-KISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ K + W Y ++E R R + T E
Sbjct: 451 CNNMQKARELWDSIMTKGNAKYANMWLEYYNLERAHGDTQHCRKALHRAV--QCTSDYPE 508
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEHSVK 311
+C L ER GTLED+D +VQK RL E R+ +++E+ +L + ++K K
Sbjct: 509 HVCEVLLTMERTEGTLEDWDIAVQKTETRLARVNEQRIKVAEKEA-ALAQQEEEKAEQRK 567
Query: 312 KT--------------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQ 351
+ G +KRK++ + E+ P+KR+K P +++
Sbjct: 568 RARAEKKALKKKKKTRGADKRKAEEDDEKEWGDDEEEQPSKRRKVEDSTPSAGEAQDREP 627
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--L 408
L ++ + +++ + +K VP + D T F+SN+ + D L
Sbjct: 628 EAGLLGKSVPVDVDPPSKQKERAAALKRDVPKVPHDSSKDSITVFVSNLPYSMSEPDVQL 687
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
R F G V+ IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 688 RPLFEACGEVAEIRPIFSN-RGDFRGYCYVEFKEEKSALQALELDRKNVEGRPMFVS 743
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V IR++ ++ GK +GLAYV++ + + AV K
Sbjct: 769 FVSGLPFSCTKEELEEICKAHGTVKDIRLVTNR-AGKPKGLAYVEYESESQASQAVLKMD 827
Query: 455 QMFLGKK-LSIARSNPKQRK---DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
M + + + +A SNP QRK RAP Q G G ++ S + + Q
Sbjct: 828 GMTVKENVIKVAISNPPQRKVPEKPEARRAPGGALVPRQIYGARGKGRTQLSLLPRALQR 887
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
G + G P PA+ T + SN +F K+ ++K
Sbjct: 888 PGAPAAQAENG-----------PAPRPAV--TTSAATEAPKMSNADFAKLLLRK 928
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 211/465 (45%), Gaps = 70/465 (15%)
Query: 17 LSDSEKFQQYMIYLKYEQSS-GDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGN 75
+ + K Y YL E + DP R+Q L+ER + + P+ W DY +++D K
Sbjct: 272 VENDHKVAAYRTYLDLEMNEFKDPARIQALFERIVAEMPLYDSFWNDYCKFVDHQFKAAE 331
Query: 76 VVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFL 135
++ RA +NCPW G +W +L+ ER + + I+ + EK+ +T + L +++
Sbjct: 332 TTFAIFQRAIRNCPWNGPIWSEYILAAERYKKEDGFIAGLVEKAFNAGLATAADLLSVWM 391
Query: 136 TRIDGLRRRILFS-GEVEGVLDYSLIRETFQRASDYLSEQMKNTDG--LLRLYAYWAHLE 192
+ I+ L R+ + + E ++ +RE F RA+++L +Q + +G L YWA+ E
Sbjct: 392 SFIEYLVRKCTWGDSDNENIVQ---LREAFTRATEHL-DQTYDVEGDPECTLLQYWAYFE 447
Query: 193 QSMGKDMVSARGVWERLLKISGAMLEAWQSYIS-MEIELDHINEARSIYKRCYSKRFTGT 251
+M AR +W ++ IS ++ Q +++ ++ E H N + ++ ++K
Sbjct: 448 AKKMNNMPKARELWSKI--ISRGHSKSAQWWLARVQFERTHDNNKEEV-RKLFTKSLNAV 504
Query: 252 GSED----ICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKE 307
S D I WL+FERE G L+ D + Q+ ++E+ +ESK +P +
Sbjct: 505 SSSDWPELIVKQWLQFEREEGDLQTMDIAKQRKRGKIED------GKESKPVPAKKPKIS 558
Query: 308 HSVKKTGR---EKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRET 364
H T K+K + ++ + PA + P
Sbjct: 559 HDAAATSTIVVPKKKVEPKVNATE-PASKPVVIP-------------------------- 591
Query: 365 KQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL 424
+P+ D P R T FLSN+ + + +D+R S G ++ IR++
Sbjct: 592 ----------KPVTD--PSRHAN-----TVFLSNLAYETSEQDVRNMMSSSGTITDIRLV 634
Query: 425 HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNP 469
D + + +G +V+F + A + +++++ G+ + ++ S P
Sbjct: 635 LD-YKQRCKGFCFVEFSSQDEARAVLKRDRELMKGRPVFMSPSEP 678
>gi|391333802|ref|XP_003741299.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Metaseiulus occidentalis]
Length = 688
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 37/456 (8%)
Query: 11 QISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKT 70
++ +LS F Y YL+ E GD R+Q+L+ERA+TD + +LW Y +Y+D T
Sbjct: 259 EMKLNNLSSPATFGDYEEYLELEIREGDAARIQMLFERAVTDDCLRVELWEKYNKYMDLT 318
Query: 71 LKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEY 130
LK+ ++ V+ R+ +N PW LWV L LER A E+I + + + A + +
Sbjct: 319 LKIDSLALPVHERSIRNVPWSSSLWVSYLTCLERMSAPTEKIEAILKDARQVAILSATDA 378
Query: 131 LDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSE--QMKNTDGLLRLYAYW 188
L+L++ + LRR+I F +++ +RE F++A L+E L L+ YW
Sbjct: 379 LNLWIFHLSNLRRKIDFKEPSSELVEQ--LRELFEKAEVELTEFTDADTEQHLESLFYYW 436
Query: 189 AHLEQSMGKDMVSARGVWERLLKI-SGAMLEAWQSYISMEIELDHINEARSIYKR-CYSK 246
A +E ++G + R +W+++ + + + ++ W SY + E R + +R Y+
Sbjct: 437 ATVEANLG-NTQRWREIWQKITRQGASSQVKTWLSYANFEKTYGDFKHYRKVLQRGLYA- 494
Query: 247 RFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSL--PESAD 304
+ E I W++ E + GTL+ + K R+ + R + ++ L +S
Sbjct: 495 --SADWPEQIGEQWVQAELQEGTLDGLQEAQSKFEARMRVVNEKRDKAATRELLNAQSTQ 552
Query: 305 QKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKR-QVQNLAEENEGRE 363
E S K+ E P KR+ A + P K ++K+ + +NL+ +G
Sbjct: 553 PPELSSKR--------------ELKPKKRK--ASESPVKNDSEDKKGKWKNLS---DGDG 593
Query: 364 TKQTVEEQPKKQ----PIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVS 419
K + PK P + T FLSN+ + E +R F DVG +
Sbjct: 594 FKMPLPVGPKSSEGSGTSHKPAPSDDDPLREAQTVFLSNLAYEVEEEKIREVFKDVGRIE 653
Query: 420 SIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+R++ D + + +G Y+ F D + +A+ K+++
Sbjct: 654 ELRLVRD-YKHRCKGFGYLVFDDLNSVQSALKKDQK 688
>gi|402887559|ref|XP_003907157.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Papio anubis]
Length = 927
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 212/478 (44%), Gaps = 70/478 (14%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLSEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFTRALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEHSVK 311
+C L ER G+LED+D +VQK RL E R+ +++E+ + + ++ E +
Sbjct: 508 HVCEVLLTMERTEGSLEDWDTAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQ--R 565
Query: 312 KTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE-----KRQVQN---LAEENEGRE 363
K R ++K+ + P KR + + D+E +R+V+N A E + E
Sbjct: 566 KRARAEKKALKKKKKTRGPEKRGADEDNEKEWGDDEEEQPSKRRRVENSIPAAGETQNIE 625
Query: 364 TK-------QTVE-EQPKKQPIKDAVPGRT------KGFTDECTAFLSNINLKATYED-- 407
TV+ E P KQ K A R D T F+SN+ D
Sbjct: 626 VAAGPAGKCATVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDVK 685
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
LR F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 686 LRPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 827 GMTIKENVIKVAISNPPQRK 846
>gi|397525225|ref|XP_003832577.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Pan paniscus]
Length = 927
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 210/476 (44%), Gaps = 66/476 (13%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFTRALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQKEH 308
+C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q++
Sbjct: 508 HVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKR 567
Query: 309 SVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQV 352
+ + G EKR +D + E+ P+KR++ P +
Sbjct: 568 ARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRFENSIPAAGETQNVEVA 627
Query: 353 QNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--LR 409
A + + + +++ K +K +P + D T F+SN+ D LR
Sbjct: 628 AGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDAKLR 687
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 688 PLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 827 GMTIKENIIKVAISNPPQRK 846
>gi|219520657|gb|AAI43254.1| SART3 protein [Homo sapiens]
Length = 927
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 210/476 (44%), Gaps = 66/476 (13%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFTRALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQKEH 308
+C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q++
Sbjct: 508 HVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKR 567
Query: 309 SVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQV 352
+ + G EKR +D + E+ P+KR++ P +
Sbjct: 568 ARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNVEVA 627
Query: 353 QNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--LR 409
A + + + +++ K +K +P + D T F+SN+ D LR
Sbjct: 628 AGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDTKLR 687
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 688 PLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 827 GMTIKENIIKVAISNPPQRK 846
>gi|332241742|ref|XP_003270039.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Nomascus leucogenys]
Length = 927
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 210/476 (44%), Gaps = 66/476 (13%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAVRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFTRALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQKEH 308
+C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q++
Sbjct: 508 HVCEVLLTMERTEGSLEDWDVAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKR 567
Query: 309 SVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQV 352
+ + G EKR +D + E+ P+KR++ P +
Sbjct: 568 ARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNVEVA 627
Query: 353 QNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--LR 409
A + + + +++ K +K +P + D T F+SN+ D LR
Sbjct: 628 AGPAGKCAAIDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDVKLR 687
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 688 PLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 36/183 (19%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
M + + + +A SNP QRK P E+ ++ + G + + +RG+
Sbjct: 827 GMTIKENVIKVAISNPPQRK------VP-EKPETRKAPGGPML-------LPQTYGARGK 872
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLK-----------PK-SNDEFRKMF 561
G + QL +PR ++ G A P+ E G PK SN +F K+F
Sbjct: 873 GRT-QLS-----LLPRALQRPG--AAAPQAENGPAAAPAVATPAATEAPKMSNADFAKLF 924
Query: 562 IKK 564
++K
Sbjct: 925 LRK 927
>gi|114646772|ref|XP_001163651.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan troglodytes]
Length = 927
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 210/476 (44%), Gaps = 66/476 (13%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFTRALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQKEH 308
+C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q++
Sbjct: 508 HVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKR 567
Query: 309 SVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQV 352
+ + G EKR +D + E+ P+KR++ P +
Sbjct: 568 ARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNVEVA 627
Query: 353 QNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--LR 409
A + + + +++ K +K +P + D T F+SN+ D LR
Sbjct: 628 AGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDAKLR 687
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 688 PLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 827 GMTIKENIIKVAISNPPQRK 846
>gi|390468140|ref|XP_003733891.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Callithrix jacchus]
Length = 927
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 210/479 (43%), Gaps = 72/479 (15%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFARALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSLPESADQKEHSVK 311
+C L ER G+LED+D +VQK RL E RL +++E+ + + ++ E +
Sbjct: 508 HVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRLKAAEKEAALVQQEEEKAEQ--R 565
Query: 312 KTGREKRKSDSNISYEQSPAKR-------------QKHAPQKPKKVHDK--EKRQVQNLA 356
K R ++K+ + P KR ++ P K ++V + + QN+
Sbjct: 566 KRARAEKKALKKKKKTRGPDKRGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNM- 624
Query: 357 EENEGRETKQTV--EEQPKKQPIKDAVPGRT------KGFTDECTAFLSNINLKATYED- 407
E G K V E P KQ K A R D T F+SN+ D
Sbjct: 625 ESAAGPAGKCAVVDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDA 684
Query: 408 -LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
L+ F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 685 KLKPLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 42/186 (22%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKVHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRG- 512
M + + + +A SNP QRK E+ ++ + +G S Q+ G
Sbjct: 827 GMTIKENVIKVAISNPPQRK-------VPEKPEARKASGGPMPSP----------QTYGA 869
Query: 513 RGDSVQLKGKNTFA-VPRNV-RPLGFPAIKPKTEEGEDLK-----------PK-SNDEFR 558
RG KG+ A +PR + RP A P+ E G PK SN +F
Sbjct: 870 RG-----KGRTQLALLPRALQRP---SAAAPQAENGPAPAPAVATPPATEAPKMSNADFA 921
Query: 559 KMFIKK 564
K+F++K
Sbjct: 922 KLFLRK 927
>gi|426374019|ref|XP_004053880.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Gorilla gorilla gorilla]
Length = 927
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 209/476 (43%), Gaps = 66/476 (13%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
+++ + +Y Y+ +E GDP R+QL++ERA+ + + DLW+ Y+QYLD+ LKV ++V
Sbjct: 305 AEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLVPDLWIRYSQYLDRQLKVKDLV 364
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE--KSLLCAFSTFEEYLDLFL 135
V++RA +NCPW LW R LL++ER + IS + + L AF+ EYL
Sbjct: 365 LSVHNRAIRNCPWTVALWSRYLLAMERHGVDHQVISDSSKELEELRAAFTRALEYL---- 420
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
EVE E F + D M+N WA +E +
Sbjct: 421 ------------KQEVE---------ERFNESGDPSCVIMQN----------WARIEARL 449
Query: 196 GKDMVSARGVWERLLKISGA-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+M AR +W+ ++ A W Y ++E R R + + T E
Sbjct: 450 CNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHR--AVQCTSDYPE 507
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRL---EELRLFRSQQESKSL---PESADQKEH 308
+C L ER G+LED+D +VQK RL E R+ +++E+ + E A+Q++
Sbjct: 508 HVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKR 567
Query: 309 SVKKT----------GREKRKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQV 352
+ + G EK +D + E+ P+KR++ P +
Sbjct: 568 ARAEKKALKKKKKIRGPEKCGADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNVEVA 627
Query: 353 QNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--LR 409
A + + + +++ K +K +P + D T F+SN+ D LR
Sbjct: 628 AGPAGKCAAIDVEPPSKQKEKAASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDAKLR 687
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
F G V IR + G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 688 PLFEACGEVVQIRPIFSN-RGDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 742
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 768 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 826
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 827 GMTIKENIIKVAISNPPQRK 846
>gi|308491360|ref|XP_003107871.1| hypothetical protein CRE_12786 [Caenorhabditis remanei]
gi|308249818|gb|EFO93770.1| hypothetical protein CRE_12786 [Caenorhabditis remanei]
Length = 862
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 217/488 (44%), Gaps = 57/488 (11%)
Query: 6 AHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQ 65
A +E I +++ K Q ++ ++E+ SG P R+Q+ +ER +++F D W Y
Sbjct: 234 AKFQEMIDKKET----KRQGLKLFFEFEKKSGMPTRIQMAHERLVSEFSDDEDAWCAYGA 289
Query: 66 YLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFS 125
+ + LK+ V DVY RA ++CP+ L ++LL+LER+R +EI ++E++ +
Sbjct: 290 WTESFLKLPQVSVDVYKRALRHCPYSYVLHQQALLALERARKPHQEIDELWERTKNTVIN 349
Query: 126 TFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRL 184
E+ L+ T LRRRI SG DYS + E F + L E D
Sbjct: 350 AAEDGRGLYRTYAFLLRRRIALSGSS----DYSPMAEVFDEGAAILKEWFSMAWDPTGEY 405
Query: 185 YAYWAHLEQSMGKDMVSARGVWERLLKIS-GAMLEAWQSYISMEIELDHINEARSIYKRC 243
A+ S+ KDM R +W +L G W + +E + AR +
Sbjct: 406 RQMQAYFYASLMKDMEKCRKIWNDILASGFGRFAGKWLEAVRIERQFGDNENARKFLNKA 465
Query: 244 YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPE-- 301
+ +I +++FERE GTL + D ++KV + R+ + K LPE
Sbjct: 466 LNS--VSDNINEIYLYYVQFEREEGTLAELDTVLEKVNTQAAH----RASRPQKKLPEKA 519
Query: 302 SADQKEH--SVKKTG-------REKRKSDS-------NISYEQSPAKRQKHAPQKPKKVH 345
+A QK+H +V+K ++ + +D I+ + H P KK+
Sbjct: 520 AAPQKDHKEAVQKRSAGGEPIVKKVKSADGGEWMEIIGITVNFFLGFKAPHPPSMAKKLP 579
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
A G + PK +P G D T F+SN++ T
Sbjct: 580 SPSG---STTATAPSGSFS------TPKAEP----------GTEDARTIFVSNLDFTTTE 620
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKS-RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+D+R+ + GVSSIR T ++ RG AYV +DE A+ K++ G+ + I
Sbjct: 621 DDIRQ---AIEGVSSIRFARKAHTEETHRGFAYVVMENDEKAKNALQKDRVPVKGRPMFI 677
Query: 465 ARSNPKQR 472
+ ++P++R
Sbjct: 678 SANDPEKR 685
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 13/172 (7%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N++ +AT +++ FS G V+S+R + + GK +G+A+VDF + VA
Sbjct: 700 FVRNVHFEATDDEILALFSKFGTVTSVRRVTHR-DGKPKGVAFVDFESESSAQKCVASGD 758
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERA-PTEQAQSHQQTGNAGTS-ASKESSIETSKQSR 511
++ L +++ +A SNP +K+ G+ P+++ ++ ++ G A+K + + ++
Sbjct: 759 KLILREREIEVAISNPPSKKEKHGKGGFPSKREEAREEDGGPRKGHAAKLQLVPRALSTK 818
Query: 512 GRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
+ +L + PA P SND+FRK+F++
Sbjct: 819 TPQITARLDAMDVSET---------PASSSSGTSSSSSTPLSNDQFRKLFMR 861
>gi|324503789|gb|ADY41640.1| Squamous cell carcinoma antigen recognized by T-cell 3 [Ascaris
suum]
Length = 851
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 234/532 (43%), Gaps = 62/532 (11%)
Query: 6 AHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPV--SSDLWLDY 63
A E ++ L+ ++ Y++ E GDP RVQ+ +ERA+T +++LWL Y
Sbjct: 222 APFENRLEDDSLTVEDQLNILSEYIEMEIQGGDPARVQMTFERAVTVSAAEPNANLWLQY 281
Query: 64 TQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEIST--VFEKSLL 121
+LD LK+ +V VY RA ++ P LW + L +LER+ + E I + K +
Sbjct: 282 GSWLDSKLKIPSVAVSVYERAIRHAPCTA-LWQQYLSALERANSPTELIDSKWPLAKESI 340
Query: 122 CAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-KNTDG 180
C T +E L L+ T I RRR GE DYS + E F+ S +L E+ ++ D
Sbjct: 341 C---TADEGLSLYRTYIYLTRRRASAQGE-----DYSKVLELFEEGSTFLQERFGQHWDS 392
Query: 181 LLRLY-AYWAHLEQSMGKDMVSARGVWERLLKI-SGAMLEAWQSYISMEIELDHINEARS 238
Y +A ++ K R +W +L SG + AW ++E ++N AR
Sbjct: 393 PKAQYRKNYALFLYTVAKQPEKGRRIWNDILASGSGHLAAAWLEAANLERFFGNVNIARK 452
Query: 239 IYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKS 298
+ R + + A ++FERE GTLE+ D +++KV +Q +
Sbjct: 453 MLYRAINS--ASDHPYMVYEALIQFEREVGTLEELDKALEKVN----------AQAARVA 500
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSP-----AKRQKHAPQKPKKVHDKEKRQ-- 351
+ EH +++GR K+++D + E+ A++ ++A + K + + KRQ
Sbjct: 501 ARPPKKKAEH--ERSGRSKKETDRREAGEKEEAGAKLAEKGENAENESKPLQNGGKRQHD 558
Query: 352 -VQNLAEENEGRETKQTVEEQPKKQPIKDAVP--------------------GRTKGFTD 390
+ A + ++ K ++E P VP G G +
Sbjct: 559 EANDHANHPDEKKAKVVIDEDGFAVPTSLKVPKKVGSGAGAAVASTEAPSSSGNVNGSEN 618
Query: 391 EC-TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
T F+SN++ K E + + F + +R + + +G YVDF E A
Sbjct: 619 SAKTVFISNLDFKLPKEKIMQIFPN---AKEVRFIQRGMSKLHKGFGYVDFETVEEAQEA 675
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKE 501
++K++ + G+ + ++ + P ++ + R PT ++ N A+ E
Sbjct: 676 LSKDRHLIDGRPMYVSENKPHEKGQRNEFRYPTTLEKNKLFVNNVHYDATSE 727
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F++N++ AT E ++ F+ G + +RI+ K +GKS+G AYV+F ++ +AA+
Sbjct: 716 FVNNVHYDATSEQVKEVFAVFGAIRDVRIVTHK-SGKSKGCAYVEFEEESAASAALKAED 774
Query: 455 QMFLGKKLSIARSNPKQRKDSS 476
+ L +KLS+A SNP ++KD S
Sbjct: 775 IVLLERKLSVAYSNPPKKKDLS 796
>gi|428178044|gb|EKX46921.1| hypothetical protein GUITHDRAFT_162845 [Guillardia theta CCMP2712]
Length = 824
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 163/651 (25%), Positives = 273/651 (41%), Gaps = 116/651 (17%)
Query: 5 RAHLEEQI---SRQDLSDSEKFQQ----------YMIYLKYEQSSGDPGRVQLLYERAIT 51
+A +EE + S ++L D+E +Q + ++ E SGD ++ YERA++
Sbjct: 194 KAEVEEAMMKASERELKDAEARRQKDSSLNVLEIWQECIESESESGDVTKIICAYERALS 253
Query: 52 DFPVSSDLWLDYTQYL-DKTLKVGNV-VRDVYSRATKNCPWVGELWVRSLLSLERSRASE 109
+ LW Y +++ + G + V DVY R+ +NCP+ ELW L+ E
Sbjct: 254 TCCLVPTLWNSYAEFVRSQPSGAGGIKVADVYRRSVRNCPFSVELWCSLLICSEEDGLDM 313
Query: 110 EEISTVFEKSLLCAFSTFEEYLDLFLTRI-----DGLRRRI--LFSGEVEGVLDYSLIRE 162
+E+ +F+K A + + Y L L I D RR L G + + +R
Sbjct: 314 KEMKVLFQK----ATNEIKHYSPLQLVEILSAECDCARRSFTKLPEDSRNGSQEGNELRS 369
Query: 163 TFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQS 222
T + + L E++K+ G L YWA +E + D+ A +W+ +LK L W S
Sbjct: 370 TLKDSVKLL-EEVKDESGARHLRGYWAEIEAFLFSDLDEAIKLWDSVLK-GCQDLSLWCS 427
Query: 223 YISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQK--- 279
+ + +ARS +KR + + +C+ WL FER G LE + + K
Sbjct: 428 VVDALRSCRRVGQARSFFKRGLNTLQSAPELASLCYRWLEFERREGDLETYGQARAKYAT 487
Query: 280 ---VTPRL----EELRLFRSQQESKSL-PESADQKEHSVKKTGREKRKSDSNISYEQSPA 331
P++ + R+ + +E KS PE A ++E +KK +RK +S+ +++PA
Sbjct: 488 FAVTNPQVAVDDKVGRVAKKSREKKSDDPERAKRREEVMKKWA--ERKENSSKVEKKAPA 545
Query: 332 --KRQKHAPQKPKKVHDKEKRQ-----------------------VQNLA---------- 356
KR++ K ++ +K KRQ +QNL
Sbjct: 546 SKKRKQAEDSKDQESEEKAKRQKVDGGGQQPEQASSGESNLNTVFMQNLPHGIRLRRLQD 605
Query: 357 -----------------EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNI 399
EE +G E K E K + + R D+ ++S +
Sbjct: 606 RAGGQDCPGRPLRSRGEEEKDGTEMKGRRVEVSKARELHSLNEQRD---VDQRVLYVSGL 662
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
+ + E ++ FS V V +R++ D+ G RG YV+F D ++ ++ +F G
Sbjct: 663 SKNVSKESIKDHFSTVAEVLEVRLMRDR-DGNLRGFCYVEFKDRAGAELSLQMDQTVFQG 721
Query: 460 KKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKES------SIETSKQSRGR 513
KKL +A S+P S G A ++ A S G+A SA + S +++ ++
Sbjct: 722 KKLRVAFSDP-----SRGRAASSKAANS----GSAAPSAPRSSLNLVPRAVKRPQEPARP 772
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKP-KSNDEFRKMFIK 563
+Q P P A K E+ P K ND FR+MF K
Sbjct: 773 ARRIQQAAHQPVPKPTEPSP---SAPAEKAEDAASAAPKKDNDYFRQMFSK 820
>gi|268536402|ref|XP_002633336.1| Hypothetical protein CBG06075 [Caenorhabditis briggsae]
Length = 842
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 197/450 (43%), Gaps = 37/450 (8%)
Query: 29 YLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNC 88
+ ++E+ SG P RVQ+ +ER + + D W Y + + LK+ + ++Y RA ++C
Sbjct: 253 FFEHEKKSGMPARVQMAHERMVAELSDDEDAWCAYGAWTEYELKLPQISVEIYERALRHC 312
Query: 89 PWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFS 148
P+ L ++LL+LER++ +E I ++ K+ + EE L+ T LRRRI +
Sbjct: 313 PYSYVLHQQTLLALERAQKPDEVIDRLWAKAKNNVINAAEEGRGLYRTYAFLLRRRIFLA 372
Query: 149 GEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYWAHLEQSMGKDMVSARGVWE 207
G D+S + E F + L E D A+ S+ KDM R +W
Sbjct: 373 GSK----DFSPMAEVFDEGAAILKEWFTMAWDPNAEYRQMQAYFYASLMKDMDKCRKIWN 428
Query: 208 RLLKIS-GAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFERE 266
+L G W + +E + AR + + +I +++FERE
Sbjct: 429 DILASGFGRFAGKWLEAVRIERQFGDKENARRFLNKALNS--VSDNINEIYLYYVQFERE 486
Query: 267 YGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSN--- 323
GTL + D ++KV + R+ + K LPE K + +K ++ +K +
Sbjct: 487 EGTLSELDQVLEKVNAQASH----RANRPQKKLPE----KPYPSEKDNKDLKKRTAGGEP 538
Query: 324 ISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG 383
I + A AP P + K+ + PK QP
Sbjct: 539 IVKKVKSADGGFKAPLPPTAL----KKPTPPSTQTTTSSTAPSVSFSTPKSQP------- 587
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS-RGLAYVDFID 442
G D T F+SN++ T +D+R+ + GV+SIR T ++ RG AYV +
Sbjct: 588 ---GTEDARTIFVSNLDFTTTEDDIRQ---AIQGVTSIRFARKAHTDETHRGFAYVVMEN 641
Query: 443 DEHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
+E A+ K++ G+ + I+ ++P++R
Sbjct: 642 EEKTRIALQKDRVSVKGRPMFISANDPEKR 671
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 47/186 (25%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N++ +AT E+L G V S+R + + GK +G+A++DF + VA
Sbjct: 686 FVRNVHFQATDEELL-----FGPVKSVRRVTHR-DGKPKGVAFIDFESESSAQQCVASGD 739
Query: 455 QMFLGKK-LSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
++ L ++ L +A SNP +KD + H G AG AS+E +G
Sbjct: 740 KLVLRERDLEVAISNPPAKKD-----------KHHPHVGFAGKVASEEDG-----GRKGH 783
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGE----------------DLKPKSNDEF 557
+QL VPR + P I + + + KP SND+F
Sbjct: 784 AAKLQL-------VPRAIAAKA-PQITARMDAMDVSEKPASSKASTSSTSASKPMSNDQF 835
Query: 558 RKMFIK 563
R+MF++
Sbjct: 836 RQMFMR 841
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 206/491 (41%), Gaps = 41/491 (8%)
Query: 8 LEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYL 67
LE ++ +D S E+ Y+ Y+ E+ + R LYERA+T P+ LW DY YL
Sbjct: 278 LEATLATEDAS--ERRAAYLRYIDEEKKTS-AERAATLYERAVTASPLDPGLWADYLLYL 334
Query: 68 DKTLKVGN---VVRDVYSRATKNCPWVGELWVRSLLSLERSRASE-EEISTVFEKSLLCA 123
T K + RA +NCPW LW + LL+ E R SE + V E++L
Sbjct: 335 ATTGKAATKQPLSSAAPRRAVRNCPWSSALW-KHLLAHEERRGSEYNTVKGVLEEALQMP 393
Query: 124 FSTFEEYLDLFLTRIDGLRRRILFSGEV---EGVLDYSLIRETFQRASDYLSEQM-KNTD 179
F ++Y+ ++L RR G EG R T A +Y + + K T
Sbjct: 394 FQAPDDYVQVWLAFCQYCFRRTQLEGVAPTHEGEDALETWRLTVGGAKEYTEQYLSKETP 453
Query: 180 GLLRLYAYWAHLEQSMGKDMVSARGVWERLLKIS--GAMLEAWQSYISMEIELDHINEAR 237
G L Y A E ++ AR V E L++ G L W + E I+ AR
Sbjct: 454 GYASLCLYEAKTEALRFDNLTRAREVMEDLVRTGSFGKQLATWLPFFHFERISSGIDSAR 513
Query: 238 SIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESK 297
++ +R +F E I + RFE E G+L D D + ++ L+ R++ ESK
Sbjct: 514 AVLRRAV--QFVRDQPEAIVDTYTRFEEENGSLADVDDAARRCYQALQLAAAARAKAESK 571
Query: 298 SLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAE 357
++ ++ + +K REK K E+ + H + K + A
Sbjct: 572 RGKKAPAAQQQNKRKQQREKDKPRGKRRQEERGGATPADDASRHNAAHARTKHDASSSAS 631
Query: 358 ENEGRETKQTVEEQP--KKQPIKDAVP-------------------GRTKGFTDEC---T 393
R P K+ + P G +GF E T
Sbjct: 632 APGTRAGDDDTGAGPSMKRAKMDSQAPASAHGHHDGDNYGGHGDGDGERRGFDVEAAQRT 691
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
F+ N++ + L+ FF D G + IR++ K +G+S+G AY++F + LA A++K+
Sbjct: 692 VFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVR-KPSGQSKGFAYIEFEEKSSLAFALSKD 750
Query: 454 KQMFLGKKLSI 464
+Q G+ + +
Sbjct: 751 RQFMNGRPVLV 761
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
P GF D T F+ ++ T +D+R F G V +R++ GK RG AYV+F
Sbjct: 774 PKHQTGF-DPRTVFVKRLDHSCTEQDVRTLFEQYGAVKEVRMV-TTLAGKPRGFAYVEFE 831
Query: 442 DDEHLAAAVAK-NKQMFLGKKLSIARSNPKQRKDSS-GERAPTEQAQSHQQTGNA 494
A A+ +K F G++L +A SNP + + GER P ++ Q A
Sbjct: 832 ASRDAATAIMNLDKAEFKGRQLQVALSNPPSKGHAGEGERGPPQRDHRGQGAATA 886
>gi|170571431|ref|XP_001891725.1| hypothetical protein [Brugia malayi]
gi|158603609|gb|EDP39472.1| conserved hypothetical protein [Brugia malayi]
Length = 842
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 229/501 (45%), Gaps = 36/501 (7%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVS--SDLWLDYTQYLDKTLKVGNV 76
+++K M Y+ +E + DP R+Q+++ERA+ S SDLWL Y +LD +LK+ V
Sbjct: 229 ENKKLSILMEYINFEMQTNDPARIQMIFERALCAIAASPNSDLWLHYGNWLDSSLKLPQV 288
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
DVY+R+ ++ P LW + +LERS AS EEI T + + T EE L+ T
Sbjct: 289 STDVYARSVRHAP-CSALWQQYFSALERSDASPEEIDTKWPDA-RDTIMTQEEGFSLYRT 346
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-KNTDGLLRLY-AYWAHLEQS 194
I LRRR+ +G DYS + E F +D+L+++ N D Y A +
Sbjct: 347 YIYLLRRRVT----KQGNNDYSAVLEKFDEGADFLAKKFGANWDSPKAQYRKNHALFLYT 402
Query: 195 MGKDMVSARGVWERLLKI-SGAMLEAWQSYISMEIELDHINEARS-IYKRCYSKRFTGTG 252
K A +W +L SG + AW ++E +N AR +YK S
Sbjct: 403 SAKQPKKALKIWNDILASGSGHLATAWIEAANLERFFGDVNNARKLLYKAINS---ASDH 459
Query: 253 SEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEEL--RLFRSQQESKSLPESADQKEHSV 310
+ A ++FERE G+++D D ++QKV ++ + R +++ E S + E
Sbjct: 460 PYTVFDALIQFEREVGSIDDLDKALQKVNAQVSRISSRPQKNKMEKSSKKRKKENDEDVE 519
Query: 311 KKTGRE--KRKSDSNISYEQ---SPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETK 365
K RE ++K I+ E + + Q+ K++ + +K+QV + +G
Sbjct: 520 VKRKREDVEKKGQKFITNEDDFINGTLKITAKIQQKKEMSEVDKKQV-----DGDGFVVP 574
Query: 366 QTVEEQPKKQPIKDAVPGRTKGFTDEC-----TAFLSNINLKATYEDLRRFFSDVGGVSS 420
Q + K + G +G ++E T F+SN++ K E L+ F +
Sbjct: 575 QLPSQSSKLRTASSQDLG-LQGTSEEASEKRHTVFVSNLDFKLPTERLKEIFLN---AKE 630
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
IR+++ + +G Y+DF + A+ ++ G+ L ++ P + ++ R
Sbjct: 631 IRLVYRGMSKLHKGFGYIDFSTEREARDALKMDRTQIDGRPLYVSEYKPHDKGKNTEFRY 690
Query: 481 PTEQAQSHQQTGNAGTSASKE 501
T ++ N A++E
Sbjct: 691 STGLEKNKVFVNNIHYDATEE 711
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
F++NI+ AT E L+ F+ G + IRI+ K +GKS+G AYV+F +D A AV
Sbjct: 699 VFVNNIHYDATEEQLKEIFTIFGTIRDIRIVTHK-SGKSKGCAYVEFENDNDAAMAVKAG 757
Query: 454 KQ---MFLGKKLSIARSNPKQRKD 474
+ L +KLS+A SNP +RK+
Sbjct: 758 DAGDLILLERKLSVAISNPPKRKE 781
>gi|170059947|ref|XP_001865584.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878529|gb|EDS41912.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 892
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 207/462 (44%), Gaps = 49/462 (10%)
Query: 21 EKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDK----------T 70
E+ Y Y++ +S + +Q+LYER+ TD + +W DY +YLDK +
Sbjct: 278 ERADLYREYIRECRSQLEDDDLQVLYERSCTDCCLDPTVWTDYLKYLDKYPPDPDEAEAS 337
Query: 71 LKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEY 130
V DV +RA +NCPW EL+V + ER + + +I + E+ F E
Sbjct: 338 PVFAQSVLDVVNRALRNCPWSAELYVEKMRICEREKRGKADILKIMEEVATVEFQAPEPA 397
Query: 131 LDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWA 189
+ ++L + LRR F E E ++R F+ A + L D ++ +W
Sbjct: 398 VKVWLEYLTYLRRHADFENEKE----REILRSNFELAWNQLGRTWGELADPECKILQFWG 453
Query: 190 HLEQSMGKDMVSARGVWERLLKIS--GAMLEAWQSYISMEIELDHINEARSIYKRCYSKR 247
LE KD + R +W+ ++ S + W Y +E ++ R +Y++
Sbjct: 454 RLEYGALKDPLKGRDLWQSVMDSSDNSTRVGLWIEYAELEA-TRGLDAVRKLYRKAIGS- 511
Query: 248 FTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKE 307
E + AW+RFER G+LE +EL + + Q+ KSL +QK
Sbjct: 512 IALNDPETLAAAWMRFERVNGSLEQLTTC--------QELCVAKVQEFYKSL---GNQKP 560
Query: 308 HSVKKTGREKRKSDSNISYEQSPAKR--QKHAPQKPKKVHDKEKRQVQNLAEENEG--RE 363
+++ K+ +D N S ++ P KR +H +KP V +++ + EEN R
Sbjct: 561 PKGRRSD-PKKDADQNDSPKKKPIKRTHDEHEFKKP-AVPSLPRQKPEPTIEENTKRIRL 618
Query: 364 TKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
++ + +P+ P KD F+SN++ AT + +R F ++ SI +
Sbjct: 619 EEEPIPAKPEIDPTKDVK-----------RVFISNLSFDATEDQIRACFPEL-NFKSIEL 666
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
+ +GKSRG Y + + + A++ +++ G+ + I+
Sbjct: 667 VQSS-SGKSRGFGYAELNHEADVQKALSFDRRPLNGRPVFIS 707
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + +AT +D+R+ F G + +R+++ + +GKS+GLAYV++ + +AV
Sbjct: 732 FVKGLPFEATPDDIRKLFEPHGKLKDVRVVYYR-SGKSKGLAYVEYESEAAAKSAVVHMD 790
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
Q + G +S+ S P R + PT A + +G A + + SS+ K+ +
Sbjct: 791 QYCMDGFTISVDLSAPPPRGN------PTMTATT---SGGAPDADAGGSSLGGGKRHVVK 841
Query: 514 GDSVQ---------LKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
GD Q L K T + P P G + P KPKSN++FRKM +K
Sbjct: 842 GDVKQKLSTLIPTALLRKTTVSTPAGQVPTG--SATPSA------KPKSNEDFRKMLLK 892
>gi|312080354|ref|XP_003142564.1| hypothetical protein LOAG_06982 [Loa loa]
Length = 737
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 31/285 (10%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVS--SDLWLDYTQYLDKTLKVGNV 76
++EK M Y+ +E + DP R+Q+++ER + F S SDLWL Y +LD +LK+ V
Sbjct: 106 ENEKLSVLMEYIDFEMQTNDPARIQMIFERTLCTFAASPSSDLWLQYGNWLDSSLKLSQV 165
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
DVY+R+ ++ P LW + +LERS AS EEI + + A +T EE L L+ T
Sbjct: 166 SVDVYARSVRHAP-CSALWQQYFSALERSNASPEEIDAKWPDA-RDAITTQEEGLSLYRT 223
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN----------TDGLLRLYA 186
I LRRR+ +G DY + + F + +L+E+ + + L LY
Sbjct: 224 YIYLLRRRV----AKQGGNDYLAVLKKFDEGAAFLAEKFGSHWDSPKAQYRKNHALFLYT 279
Query: 187 YWAHLEQSMGKDMVSARGVWERLLKI-SGAMLEAWQSYISMEIELDHINEARS-IYKRCY 244
E+++ +W +L +G AW ++E IN AR +YK
Sbjct: 280 SAKQPEKAL--------KIWNDILASGNGHFAAAWIEAANLERFFGDINNARKLLYKAVN 331
Query: 245 SKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRL 289
S T + A ++FERE GT+ED D ++QKV + + L
Sbjct: 332 S---TSDHPYTVFDALIQFEREVGTIEDLDKALQKVNAQAARISL 373
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AK 452
F++N++ AT E L+ F+ G V +RI+ K +GKS+G AYV+F +D+ A AV A
Sbjct: 575 VFVNNVHYDATEEQLKEIFATFGAVRDVRIVTHK-SGKSKGCAYVEFENDDDAAVAVKAS 633
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRG 512
+ L +KLS+A SNP +RK+ + + SHQ++ + T+K +R
Sbjct: 634 EDLILLERKLSVAISNPPKRKEQLQRLSFNTTSFSHQRS---KIDLIPRTLARTTKLARS 690
Query: 513 RGDS 516
GD+
Sbjct: 691 AGDN 694
>gi|393909222|gb|EJD75365.1| Sart3 protein [Loa loa]
Length = 879
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 227/513 (44%), Gaps = 52/513 (10%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVS--SDLWLDYTQYLDKTLKVGNV 76
++EK M Y+ +E + DP R+Q+++ER + F S SDLWL Y +LD +LK+ V
Sbjct: 239 ENEKLSVLMEYIDFEMQTNDPARIQMIFERTLCTFAASPSSDLWLQYGNWLDSSLKLSQV 298
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
DVY+R+ ++ P LW + +LERS AS EEI + + A +T EE L L+ T
Sbjct: 299 SVDVYARSVRHAP-CSALWQQYFSALERSNASPEEIDAKWPDA-RDAITTQEEGLSLYRT 356
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN----------TDGLLRLYA 186
I LRRR+ +G DY + + F + +L+E+ + + L LY
Sbjct: 357 YIYLLRRRV----AKQGGNDYLAVLKKFDEGAAFLAEKFGSHWDSPKAQYRKNHALFLYT 412
Query: 187 YWAHLEQSMGKDMVSARGVWERLLKI-SGAMLEAWQSYISMEIELDHINEARS-IYKRCY 244
E+++ +W +L +G AW ++E IN AR +YK
Sbjct: 413 SAKQPEKAL--------KIWNDILASGNGHFAAAWIEAANLERFFGDINNARKLLYKAVN 464
Query: 245 SKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRL----FRSQQESKSLP 300
S T + A ++FERE GT+ED D ++QKV + + L + ++ SK
Sbjct: 465 S---TSDHPYTVFDALIQFEREVGTIEDLDKALQKVNAQAARISLRPQKNKVEKNSKKRK 521
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAP---QKPKKVHDKEKRQVQNLAE 357
+ D+ K+ K+K I+ E A Q+ ++ + +K+QV
Sbjct: 522 KENDEDVEIKKRKEDMKKKGQILITNEDEFRNGTTEAATKIQQKSEMINVDKKQV----- 576
Query: 358 ENEGRETKQTVEEQPKKQPIKD---AVPGRTKGFTDE--CTAFLSNINLKATYEDLRRFF 412
+ +G Q + PK + I + G ++ + E T F+SN++ K E L F
Sbjct: 577 DGDGFVVPQLPSQLPKPKTISSQSVSSEGTSREASSEKRHTIFVSNLDFKLPTERLEEIF 636
Query: 413 SDVGGV----SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSN 468
+ V + LH RG+ F+ ++ A+ ++ G+ + ++
Sbjct: 637 PNAKEVRLVYRGMSKLHKVLYCLLRGIWLYRFLTEQEAREALKMDRTQIDGRPMYVSEYK 696
Query: 469 PKQRKDSSGERAPTEQAQSHQQTGNAGTSASKE 501
P + ++ R T ++ N A++E
Sbjct: 697 PHDKGKNTEFRYSTSLERNKVFVNNVHYDATEE 729
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AK 452
F++N++ AT E L+ F+ G V +RI+ K +GKS+G AYV+F +D+ A AV A
Sbjct: 717 VFVNNVHYDATEEQLKEIFATFGAVRDVRIVTHK-SGKSKGCAYVEFENDDDAAVAVKAS 775
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRG 512
+ L +KLS+A SNP +RK+ + + SHQ++ + T+K +R
Sbjct: 776 EDLILLERKLSVAISNPPKRKEQLQRLSFNTTSFSHQRS---KIDLIPRTLARTTKLARS 832
Query: 513 RGDS 516
GD+
Sbjct: 833 AGDN 836
>gi|341890610|gb|EGT46545.1| hypothetical protein CAEBREN_32157 [Caenorhabditis brenneri]
Length = 847
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 206/453 (45%), Gaps = 44/453 (9%)
Query: 29 YLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNC 88
+ ++E+ +G P R+Q+ +ER +++ + + W Y + + LK+ V +VY RA ++C
Sbjct: 253 FFEHEKKTGLPIRIQMAHERMVSELDDNEEEWSAYGAWTESVLKLPQVSVEVYERALRHC 312
Query: 89 PWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFS 148
P+ L ++LL+LER+R E I ++E++ + +E L+ T LRRR++ +
Sbjct: 313 PYSYVLHQQALLALERARKPNEVIDQLWERAKNNVINAADEGRGLYRTYAFLLRRRLVLA 372
Query: 149 GEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYWAHLEQSMGKDMVSARGVWE 207
G ++S++ E F + L E D A+ S+ KDM R +W
Sbjct: 373 GST----NFSIMAEVFDEGAALLKEWFSMAWDPTAEYRQMQAYFYASLMKDMDKCRKIWN 428
Query: 208 RLLKIS-GAMLEAWQSYISMEIEL-DHINEARSIYKRCYSKRFTGTGSEDICHAWLRFER 265
+L G W + +E + D+ N R + K S +I +++FER
Sbjct: 429 DILASGFGRFAGKWLEAVRLERQFGDNENARRYLNKALNS---VSDNVNEIYLYYVQFER 485
Query: 266 EYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNIS 325
E GTL + + ++KV ++ R+Q+ K +PE K K +KR N+
Sbjct: 486 EEGTLAELELVLEKVNAQVAH----RAQRPQKKVPE----KPVPATKDKTQKR----NVG 533
Query: 326 YEQSPAKRQKH-----APQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDA 380
E K + + AP P + + + + PK P
Sbjct: 534 GEPIVKKVKSNDGDFKAPLPPSILKKSSPTTTPKSSSTSAAPSVSFDI---PKAAP---- 586
Query: 381 VPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS-RGLAYVD 439
G D T F+SN++ + +D+R+ + GVSSIR T ++ RG AYV
Sbjct: 587 ------GTEDARTIFVSNLDFTTSEDDIRQ---AIEGVSSIRFARKAHTDETHRGFAYVV 637
Query: 440 FIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
++E + AA+ K++ G+ + I+ ++P++R
Sbjct: 638 MDNEEKVKAALKKDRVPVKGRPMFISANDPEKR 670
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N++ +AT ++L FS G V+S+R + + GK +G+A++DF + VA
Sbjct: 685 FVRNVHFQATDDELNALFSKFGKVTSVRRVTHR-DGKPKGVAFIDFESEACAQKCVASGD 743
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGE--RAPTEQAQSHQQTGNAGTSASKESSIET-SKQS 510
++ L ++L +A SNP +K+ G+ A E + + G+A +I + Q
Sbjct: 744 KLTLRDRELEVAISNPPAKKEKHGKSGHAAREVDEDGPRKGHAAKLQLLPRAIANKAPQI 803
Query: 511 RGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
R D++ + + + A + P SND+FRK+F++K
Sbjct: 804 TARLDAMDVSEPTSSSS----------APSTSSSASSSSTPLSNDQFRKLFMRK 847
>gi|443701069|gb|ELT99707.1| hypothetical protein CAPTEDRAFT_217624, partial [Capitella teleta]
Length = 462
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 24/211 (11%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
S+S ++Y+ Y+ +E S +P RV LYERAI D +++++W+ YT+YLD LK +
Sbjct: 274 SESPHLEEYLTYIDHEVSKNEPQRVLCLYERAIQDNCLNAEVWIKYTKYLDSVLKAKSQA 333
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTR 137
D Y RA +NCPW LW+ + ER + ++I+ +F K+L F++ EYL L++
Sbjct: 334 FDTYERAVRNCPWSCALWLGYCRAAERLQLPHDQITDLFTKALGSGFASGAEYLQLWMGN 393
Query: 138 IDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGK 197
+ + RRI D+ S ++ D L YWA +E
Sbjct: 394 LHYMHRRI-----------------------DWHSAFPEDGDPTFSLLKYWARVEARFCH 430
Query: 198 DMVSARGVWERLLKIS-GAMLEAWQSYISME 227
+M AR +W+++++ G+ E W Y+ +E
Sbjct: 431 NMPKAREIWKKVMQSGVGSQAEFWLEYVELE 461
>gi|17538232|ref|NP_502136.1| Protein B0035.12 [Caenorhabditis elegans]
gi|3873696|emb|CAA97405.1| Protein B0035.12 [Caenorhabditis elegans]
Length = 836
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 196/454 (43%), Gaps = 45/454 (9%)
Query: 29 YLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNC 88
+ +E+ SG P R+++ +ER +++ + W+ Y + D LK+ V VYSRA ++C
Sbjct: 253 FFDHEKKSGIPSRIKMAHERLVSELDDDEEAWIAYGAWADIELKLPQVAVKVYSRALRHC 312
Query: 89 PWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFS 148
P+ L ++LL+ ER R EEI ++E++ ++ EE L+ T LRRRI +
Sbjct: 313 PYSFVLHQQALLAFERDRRPNEEIDALWERARSNVINSAEEGRSLYRTYAFLLRRRIHLT 372
Query: 149 GEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYWAHLEQSMGKDMVSARGVWE 207
G DYS + E F + L E D A+ S+ K+M R +W
Sbjct: 373 GSS----DYSPMAEVFDEGAALLREWFSMAWDTTADYRQMQAYFYASLMKNMDKCRNIWN 428
Query: 208 RLLKIS-GAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFERE 266
+L G W + +E + AR + + +I +++FERE
Sbjct: 429 DILASGFGRFAGKWIEAVRLERQFGDKENARKYLNKALNS--VSDNINEIYMYYVQFERE 486
Query: 267 YGTLEDFDHSVQKVTPRLEELRLFRSQQE--SKSLPESADQKEHSVKKT-GRE----KRK 319
GTL + D ++KV ++ R R Q++ K P +++H K+T G E K K
Sbjct: 487 EGTLAELDLVLEKVNSQVAH-RAIRPQKKVSEKPAPAPKSKQDHIQKRTSGGEPIVKKVK 545
Query: 320 SDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKD 379
D AP P + + P ++
Sbjct: 546 GDDG----------GFKAPLPPSNAKSSSAVS-----------SSNASSTPAPGSFAVQK 584
Query: 380 AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG-KSRGLAYV 438
A PG D T F+SN++ T +++R+ + GV+SIR + RG AYV
Sbjct: 585 AAPGTE----DARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYV 637
Query: 439 DFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
+D+ A+ K++ G+ + I+ ++P++R
Sbjct: 638 VMENDQKAQQALLKDRVPVKGRPMFISANDPEKR 671
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 382 PGRTKGFTDECT-----AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLA 436
P + GF T F+ N++ +AT ++L+ FS G V+S+R + K GK +G+A
Sbjct: 668 PEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIA 726
Query: 437 YVDFIDDEHLAAAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAG 495
+VDF + VA +K M ++L +A SNP +KD +SH G
Sbjct: 727 FVDFDTEASAQKCVASGDKLMLRERELEVALSNPPVKKD-----------KSH------G 769
Query: 496 TSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTE-----EGEDL- 549
A+ +S+E +G +QL VPR + P I + + EG
Sbjct: 770 KPAAIGASLEEDGPRKGHAAKLQL-------VPRAITN-KTPQITARLDAMDVSEGTSTS 821
Query: 550 KPKSNDEFRKMFIK 563
+P SND+FRKMF+K
Sbjct: 822 QPLSNDQFRKMFMK 835
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 216/496 (43%), Gaps = 95/496 (19%)
Query: 39 PGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKV--GNVVRDVYSRATKNCPWVGELWV 96
P V L+ERA+T + ++WL Y YL++ L G +VR V +R+ +NCPW +LW+
Sbjct: 266 PNHVCCLFERAVTANCLVPEIWLRYIDYLEEKLAADKGRLVR-VLARSVRNCPWAVDLWL 324
Query: 97 RSLLSLERSRASE----------------------EEISTVFEKSLLCAFSTFEEYLDLF 134
R L+ ER+ E ++ VFE +L + + ++
Sbjct: 325 RYALASERAVNDELVNEGSNGVTEYTDRSLEHIAFSKVEAVFEAALSVGLDQQPDVMRIW 384
Query: 135 LTRIDGLRRRIL----FSGEVEGVLDYSLIRETFQRASDYLSEQMK---NTDGLLRLYAY 187
L D RR+L + E + +L S +R TF RA L + + + DG+ L Y
Sbjct: 385 LAYCDYRLRRLLRVQPSTDEYDSLL--SDLRLTFDRAESSLRKHFRHQADPDGI--LVQY 440
Query: 188 WAHLEQSMGKDMVSARGVWERLLKIS--GAMLEAWQSYISMEIELDHINEARSIYK--RC 243
+ +E K+ +AR +W + ++ GA + W +Y+ E + +A+ Y+ R
Sbjct: 441 QSFVEAKYAKNTSAARALWSQFMQQPGHGAQGQFWLAYLRFERDW---GDAKHFYRISRM 497
Query: 244 YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESA 303
++I LRF E G P + + L E++ +
Sbjct: 498 AINSINPNPEDNIFSHILRFSCEAG------------LPVAQYMEL-----EARVRSRTG 540
Query: 304 DQKEHSVKKTG--REKRKSDSNISYEQSPAKRQK-----HAPQKPKKVHDKEKRQVQNLA 356
D S+ T R K+ S + ++P+ R++ P+ KK K + +A
Sbjct: 541 DLG-FSIHPTANVRTKKPHISEPAVSKNPSTRKRPPATDSGPKAAKK--PKSSTKEGEIA 597
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVG 416
E G++T + + + D P R D+ T F+SN++ T +DLRR F + G
Sbjct: 598 EPPCGKQTSVGSPKAHGEHVVHD--PSR-----DDRTVFVSNLDYSTTEDDLRRTFEECG 650
Query: 417 GVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ-----------------MFLG 459
+SS+R++ D + G+S+G AYV+F A+ K++Q M +
Sbjct: 651 KLSSVRLVRD-YAGRSKGYAYVEFEQASAADVALKKDRQPIGPSAASEATPSTDDTMTIA 709
Query: 460 KKLSIARSNPKQRKDS 475
+ + ++R +P + K S
Sbjct: 710 RPMFVSRCDPNRSKSS 725
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N++ + T L + F + G V S+RI + G +G AYV+F + + + A+
Sbjct: 740 FVRNLDKRVTAHALEQLFGEHGTVVSVRIATYR-NGAPKGHAYVEFANADQASRALVATD 798
Query: 455 QMFLG-KKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSI-ETSKQSRG 512
+ +G K +++A SNP R PT A + Q +A E + E +S G
Sbjct: 799 GLLVGSKNIAVAISNPPVRN-------PTGLAVTKQSNQPTKPNAPSEHILHEQKPRSHG 851
Query: 513 RGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKP-----KSNDEFRKMFI 562
R QL +PR + G + ++ E P K+N++FRKMF+
Sbjct: 852 R---TQLA-----FLPRALN-RGTTSGSGNSDAAESAPPCGDAMKNNEDFRKMFL 897
>gi|157131009|ref|XP_001655775.1| hypothetical protein AaeL_AAEL011963 [Aedes aegypti]
gi|108871684|gb|EAT35909.1| AAEL011963-PA [Aedes aegypti]
Length = 891
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 200/462 (43%), Gaps = 46/462 (9%)
Query: 21 EKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDK----------T 70
E+ + Y Y++ +S Q+LYER++TD + +W DY +YLDK +
Sbjct: 279 ERAELYREYIRECRSQLGDDETQVLYERSVTDCCLDPTVWCDYLKYLDKYPPDEDEDSAS 338
Query: 71 LKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEY 130
+ +RA +NCPW EL+V + ER R + ++ + E+ F E
Sbjct: 339 PVFSQTTETLVNRALRNCPWSAELYVEKMRIFERERRDKADVLKIMEEVATVEFQAPEPA 398
Query: 131 LDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-KNTDGLLRLYAYWA 189
+ ++L + LRR F E E ++R F+ A + L + D ++ +W
Sbjct: 399 VKVWLEYLTYLRRHCHFEDEKER----DILRSNFELAWNQLGRTWGEMADPECKILQFWG 454
Query: 190 HLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSI--YKRCYSKR 247
LE D + R +W+ ++ S + + + IE + R ++ Y K
Sbjct: 455 RLEYGSLGDPLKGRELWQNVMDSSDNC-----TRVGLWIEYAELESKRGTDPVRKVYRKA 509
Query: 248 FTGTGSED---ICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESAD 304
G D + AW+RFER G+LE +EL + Q K+L
Sbjct: 510 IGAVGLNDPETLAAAWMRFERCNGSLEQLASC--------QELCMATIQAYYKTL----S 557
Query: 305 QKEHSVKKTGREKRKSDSNISYEQSPAKR-QKHAPQKPKKVHDKEKRQVQNLAEENEGRE 363
Q+ ++ + + SD N S ++ P KR P + K V + ++
Sbjct: 558 QQRYAKGRRSDPAKGSDVNDSPKKKPLKRAHDEHPHSDETAFKKPSIPVG----PSVSKK 613
Query: 364 TKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
+ T+E+ K+ + + P T D F SN++ +AT + +R F ++ SI +
Sbjct: 614 PEPTLEDTTKRIRLDEPKPVDTSN--DSKRLFFSNLSFEATEDQIRATFPEL-KFKSIEL 670
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
+H +GKSRG Y +F ++ + A++ +++ G+ + I+
Sbjct: 671 VHGS-SGKSRGFGYAEFESEQDVQKALSFDRRPLDGRPVFIS 711
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 28/177 (15%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + +AT +D+R+ F G + +R+++ + +GKS+GLAYV E+ + AKN
Sbjct: 736 FVKGLPFEATNDDVRKLFEPYGKLKDVRVVYYR-SGKSKGLAYV-----EYESEVAAKNA 789
Query: 455 QMFL------GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
+ L G +++A S P R G T + +Q G+ G K
Sbjct: 790 VLHLDQHNMNGFTITVAISAPPPR----GNPTATTAVKEVEQPGSLGAG----------K 835
Query: 509 QSRGRGDS-VQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+ +GD+ ++L A+ R G I D KPKSN++FRK+ +KK
Sbjct: 836 RHLVKGDAKMKLSSMIPTALLRKTAAAGPSGISAAPIATTD-KPKSNEDFRKLLLKK 891
>gi|281210510|gb|EFA84676.1| hypothetical protein PPL_01667 [Polysphondylium pallidum PN500]
Length = 887
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 199/451 (44%), Gaps = 42/451 (9%)
Query: 26 YMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVG-NVVRDVYSRA 84
++ Y+++EQ P R +L+ERAI+ S LW +Y QY D V N + Y RA
Sbjct: 312 WLEYVRFEQKK-KPMRALVLFERAISRHADSWQLWSEYLQYEDSNRLVDDNRLFATYDRA 370
Query: 85 TKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRR 144
+N W G+LWV L SLE + E + VFE++L+ +T ++ +F R D L R
Sbjct: 371 LRNIYWSGDLWVHYLQSLESHSKAIEMLEQVFERALIAGLATINDFKLIFNARFDYLWRH 430
Query: 145 ILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLL---RLYAYWAHLEQSMGKDMVS 201
+ V+ L+R+ FQR DY Q +T+ + L +WA E K +
Sbjct: 431 --YRSTVKETSTIQLLRQHFQRYYDYFI-QFNSTEVTMVISELLLFWAKFEYRQFKSIEE 487
Query: 202 ARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWL 261
+R ++ LL + YI +E+E + R+IY T + + W+
Sbjct: 488 SRKQFDLLLSFNKQYYIC-TEYIDIELECAGFEKCRTIYGEAAHAEDT---TAQVFQDWI 543
Query: 262 RFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSD 321
FER YG L+ H+ L + + ++QE K + E+ +++ ++ R+++ +D
Sbjct: 544 DFERLYGDLKQQQHA-------LSSYQKWWAKQE-KVIAENMAREQKRMEDAERKRKLTD 595
Query: 322 SNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAV 381
S + KRQK K R N K EE+ K +K +
Sbjct: 596 ER-SNSNNDRKRQKGEK------GTKNNRNSDKNNNNNNNNNGKPPREERKPKIDLKKVL 648
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
F+SNI+ T E L F G + I+ D+ G+S+G+A+V++
Sbjct: 649 -------------FVSNISFATTVEQLIELFKPFGELDLTEIVTDR-KGRSKGIAFVEYK 694
Query: 442 DDEHLAAAVAKNKQMFL-GKKLSIARSNPKQ 471
E A A+ + + L G KL + S +
Sbjct: 695 LGESAAKALEQVNGLELQGFKLKVDYSTKRH 725
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
T+ T F++N+ T E + FF+ G + IR++ R AY+D D E++
Sbjct: 767 TEGKTLFINNLAKTVTKEKMEEFFTGKGFEWTEIRLISK---AGGRPFAYMDLPDQENVE 823
Query: 448 AAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSI 504
A+ N++ F+GK L++ARS P G +AP Q + T +A ++ ++
Sbjct: 824 KALKMNQKYFMGKILNVARSKP-----PGGGKAPIPAGQVTKPTASAANIPTRRPTL 875
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 194/466 (41%), Gaps = 115/466 (24%)
Query: 24 QQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSR 83
Q +Y Y + DP + LYERA ++ ++WLDY Y LK+G + ++
Sbjct: 246 QLLRVYRDYVKVLTDPSTILCLYERATAQMCLNPEIWLDYCLY---GLKLGAPAEKITTK 302
Query: 84 ATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL--LCAFSTFEEYLDLFLTRIDGL 141
A +NCPW ELW+ L LE + E+ FE+++ L A S+ +L+L ++ +
Sbjct: 303 ALRNCPWSQELWIMRLQVLESLQKDNSEVVACFEQAVSNLGAQSS-----ELWLAYLEYV 357
Query: 142 RRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGLLRLYAYWAHLEQSMGKDMV 200
R +V D +L EQ+K N +G L++ +++ + + +M
Sbjct: 358 SRTCQDQAKVFKSFDQAL-------------EQLKYNDEGALKITKWYSRI-LAKNNNMQ 403
Query: 201 SARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED--- 255
AR +W+ LLK + A W Y +E + + R+I+++ T D
Sbjct: 404 GARNLWKNLLKSPNHKILANTWLEYARLERQFGEPPQVRAIFQKAL------TNCTDWPL 457
Query: 256 -ICHAWLRFEREYGTLEDFDHSVQK---VTPRLEELRLFRSQQESKSLPESADQKEHSVK 311
I W FERE+G L D ++K + P+L+ + K
Sbjct: 458 FIADEWREFEREFGKLPDVLKCLEKRKEIEPKLKTI--------------------EPPK 497
Query: 312 KTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQ 371
TG KRK S + P K+ K KQ V +
Sbjct: 498 ATG-TKRKHPSE---AEPPPKKHK-----------------------------KQAVVKD 524
Query: 372 PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK 431
P + T F+SN++ + LR+FF + ++ I+ DK GK
Sbjct: 525 PTR------------------TIFVSNLHTSVNEKRLRKFFPN---CENVEIVVDK-RGK 562
Query: 432 SRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
SR YV F +E + AA+A+++++ G+ + I+ P + + +G
Sbjct: 563 SRCYGYVQFALEESVMAALARDRELLDGRPIFISNCKPNREERKAG 608
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 196/466 (42%), Gaps = 115/466 (24%)
Query: 24 QQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSR 83
Q +Y Y + DP + LYERA ++ ++WLDY Y LK+G + ++
Sbjct: 256 QLLRVYRDYVKVLTDPSTILCLYERATAQMCLNPEIWLDYCLY---GLKLGAPAEKITTK 312
Query: 84 ATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL--LCAFSTFEEYLDLFLTRIDGL 141
A +NCPW ELW+ L LE + E+ FE+++ L A S+ +L+L ++ +
Sbjct: 313 ALRNCPWSQELWIMRLQVLESLQKDNSEVVACFEQAVSNLGAQSS-----ELWLAYLEYV 367
Query: 142 RRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMK-NTDGLLRLYAYWAHLEQSMGKDMV 200
R +V D +L EQ+K N +G L++ +++ + + +M
Sbjct: 368 SRTCQDQAKVFKSFDQAL-------------EQLKYNDEGALKITKWYSRI-LAKNNNMQ 413
Query: 201 SARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED--- 255
AR +W+ LLK + A W Y +E + + R+I+++ T D
Sbjct: 414 GARNLWKNLLKSPNHKILANTWLEYARLERQFGEPPQVRAIFQKAL------TNCTDWPL 467
Query: 256 -ICHAWLRFEREYGTLEDFDHSVQK---VTPRLEELRLFRSQQESKSLPESADQKEHSVK 311
I W FERE+G L D ++K + P+L+ + K
Sbjct: 468 FIADEWREFEREFGKLPDVLKCLEKRKEIEPKLKTI--------------------EPPK 507
Query: 312 KTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQ 371
TG KRK S + P K+ K KQ V
Sbjct: 508 ATGT-KRKHPSE---AEPPPKKHK-----------------------------KQAV--- 531
Query: 372 PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK 431
+KD P RT F+SN++ + LR+FF + ++ I+ DK GK
Sbjct: 532 -----VKD--PTRT--------IFVSNLHTSVNEKRLRKFFPN---CENVEIVVDK-RGK 572
Query: 432 SRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
SR YV F +E + AA+A+++++ G+ + I+ P + + +G
Sbjct: 573 SRCYGYVQFALEESVMAALARDRELLDGRPIFISNCKPNREERKAG 618
>gi|299471897|emb|CBN77067.1| Sart3 protein [Ectocarpus siliculosus]
Length = 1084
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 214/551 (38%), Gaps = 89/551 (16%)
Query: 1 MCNARAHLEEQISR---QDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITD-FPVS 56
M AR E+ + R +D + + Y E + G P R L ERA ++ +
Sbjct: 235 MLAARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGHPSRAALALERAESEGCCLH 294
Query: 57 SDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSR---------- 106
+W+ ++ L + + + +RA +N PW ELW R L SLERS
Sbjct: 295 ERIWVTHSDLLLAQMGAKDEEEKLTARAVRNLPWSAELWCRRLRSLERSSEEAGGPSGEG 354
Query: 107 --ASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFS-----------GEVE- 152
+E + V++++L + + +EY+ + L RRR+L + G VE
Sbjct: 355 TAGAEAAMRRVWKEALGSSLPSPDEYVKILLAYCASFRRRLLLAVDAVVKAKPLPGTVEA 414
Query: 153 -----------GVLD-YSLIRETFQRASDYLSEQMKNTD-GLLRLYAYWAHLEQSMGKDM 199
G+ +R F A ++ + D G L + +E + +D+
Sbjct: 415 STSDGARRSRAGIAQALEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRIQIEDELVEDI 474
Query: 200 VS-----------ARGVWERLLKISGAMLEAWQSYISMEI-ELDHINEARSIYKRCYSKR 247
AR W+R+L+ SG L +W+ I E + R +Y R ++
Sbjct: 475 ADLDLDGVAAESQARRQWDRVLRHSGKRLVSWEEAIKWERRSTGDLAACRRLYARSLNE- 533
Query: 248 FTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKE 307
E C A+L FE E G+LED+D + + V L S+ LP ++
Sbjct: 534 -VQDYPEAACTAYLNFEEEIGSLEDWDAANKGVFNSRASRGLL-----SRDLPLASRSWA 587
Query: 308 HSVK--------------------------KTGREKRKSDSNISYEQSPAKRQKHAPQKP 341
V + G+ K ++ + SPA+ +
Sbjct: 588 GGVAARPLHQPTQRQQQQKARKQQQHKQEDRGGKRNNKRSNDSAASASPAEGESPGEDSG 647
Query: 342 KKVHDKEKRQVQNLAEENEGRE--TKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNI 399
+K + + A G T ++ K P A G G + T F+ N+
Sbjct: 648 EKKKKRARTSPSTEAAAAAGSHLATTTAAADKGKGLPGNQAAAGGGPGGVEGLTVFVMNL 707
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
A LR F G V+S R+L G+S+GL YV F ++E LA A+A + G
Sbjct: 708 PFSAADAGLRGVFQGCGEVASTRVLTGP-NGRSKGLGYVTFANEEALAKALALDGTDMDG 766
Query: 460 KKLSIARSNPK 470
+ LS+ RS P+
Sbjct: 767 RTLSVQRSLPR 777
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T F+ + L AT +DLR F VG + R++ DK T +++G V F + E + A+A
Sbjct: 850 TVFVRGLGLSATSQDLREAFVGVGPMVEARVVEDKRTRETKGYGLVQFEEGEAVEKALAL 909
Query: 453 NKQMFLGKKLSIARS 467
+ G I RS
Sbjct: 910 DGTSMCGGTAQITRS 924
>gi|322787524|gb|EFZ13612.1| hypothetical protein SINV_14952 [Solenopsis invicta]
Length = 283
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 18/215 (8%)
Query: 21 EKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDV 80
+ ++ Y++Y+K DP V +LYERAITD + + +WLDY YL+ ++ V+ +
Sbjct: 78 DAYKGYLLYIK----QNDPDLVTILYERAITDLSLETSIWLDYITYLENESRLERVLNPI 133
Query: 81 YSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDG 140
Y RA+KN PW +W + + S E EI + E +L FST E+Y +L++ ++
Sbjct: 134 YQRASKNIPWCSTVWQKWIRSYECWDKHISEIQKILENALSVGFSTAEDYRNLWIIYLEC 193
Query: 141 LRRRI--LFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGL-----LRLYAYWAHLEQ 193
L R++ E+E LD +IR+TF RA EQ+ GL + YWA E
Sbjct: 194 LLRKLEQYPDEEIEKHLD--VIRKTFNRA----CEQLAKYFGLEGDPNCVILQYWARFET 247
Query: 194 SMGKDMVSARGVWERLL-KISGAMLEAWQSYISME 227
+M R +W +L + A W YI +E
Sbjct: 248 IHADNMEQTRRLWADILSQGHSATASYWMEYIVLE 282
>gi|328852755|gb|EGG01898.1| hypothetical protein MELLADRAFT_91734 [Melampsora larici-populina
98AG31]
Length = 1071
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 221/526 (42%), Gaps = 98/526 (18%)
Query: 24 QQYMIYLKYEQSSGDPG--RVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVY 81
+ Y+ YL +E ++ + V L+ERAI D P S ++W +Y +YLD + +
Sbjct: 298 EAYIKYLAWETTTKNTNFNLVSTLFERAIHDHPNSVEIWGEYFRYLDPSWAICAA----- 352
Query: 82 SRATKNCPWVGELW---VRSLLSLERSRASEEEISTVFEKSLLCAF--STFEEYLDLFLT 136
RA + PW GE+W +R+ ++ ER+ + E + + +K++ F E + +
Sbjct: 353 RRAIRTTPWSGEIWEAAIRTFMNQERNGQTAESVEELCDKAINSKFLEQDVEAIVAFSIG 412
Query: 137 RIDGLRRRI---LFSGEVEGVLDYSLIRETFQRASDYLSEQMKNT-----DGLLRLYAYW 188
R D RRR+ L +G V+ V + + +A +Y + +K D RL Y
Sbjct: 413 RADFHRRRLDAYLAAGGVDNVEQVDALMQATVKALNYGIDHVKKVPNQFGDPACRLEKYL 472
Query: 189 AHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRF 248
L + G++ +A+ VW++ K W S EI + AR YK+ + +
Sbjct: 473 TALLEHHGREDDAAK-VWQKATKQYRESYSIWISAADYEIRRGDLKRAREYYKKAANSKL 531
Query: 249 TGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQ-------------- 294
E + AW+ FE YG+LED +++V K ++ + R ++
Sbjct: 532 DY--PEYLLQAWITFEHHYGSLEDLEYAVTKTNNLMKGIAARRKRELEQQSGLLQQTSDQ 589
Query: 295 -------ESKSLPESADQKEHSVKK-----------TGREKRKSDSNISYEQSPAKRQKH 336
E+K LP+++ + + VKK G EKR ++ +PA+ +
Sbjct: 590 SRPIEISETKDLPKASAEVDTEVKKRKAEAADDIPNGGEEKRA-----RFDSAPARNVEG 644
Query: 337 APQKPKKVHDKEKRQV------QNLAEEN----------EGRETKQTVEEQPKKQPIKDA 380
K D+E V N+ E N + T TVE K+
Sbjct: 645 EELK----RDRENSTVLVGCLPSNVTEANIKQLFRDVGIDADNTVATVEFMEKES----V 696
Query: 381 VPGRTKG------------FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
+P +TK T +++N AT E +R F + G + +R +F
Sbjct: 697 LPAQTKDKKQLLDVEVSVTLAWRSTLYVTNFPEDATDEWIRSKFGEFGKIFDVRWPSKRF 756
Query: 429 TGKSRGLAYVDFIDDEHLAAAVA-KNKQMFLGKKLSIARSNPKQRK 473
+R YV F + +A+A N ++ +K+S+ S+P ++K
Sbjct: 757 KS-TRRFCYVQFTSPDSAQSALALHNTEVAPSQKMSVFISDPLRKK 801
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 189/448 (42%), Gaps = 71/448 (15%)
Query: 39 PGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV-VRDVYSRATKNCPWVGELWVR 97
P + L+ERAIT + + LW+ Y Y++ L+ + ++ + SR+ +NCPW ELW R
Sbjct: 306 PNELCCLFERAITAHCLDTSLWIRYADYVESQLETDVLRLQKLLSRSVRNCPWCVELWQR 365
Query: 98 SLLSLE------------RSRASEEEIST----------VFEKSLLCAFSTFEEYLDLFL 135
L E + A +E +S ++E +L F+ + L ++
Sbjct: 366 YALVTETVILENISFKSNTNGAQQESVSNESDLFKEVDGIYETALAAGFTNPNDVLKIWR 425
Query: 136 TRIDGLRRRILFSGEVEGVLDY--SLIRETFQRASDYLSEQMKNTDGL-LRLYAYWAHLE 192
+ D RR+ + +Y SL+R TF RA +Y E + + + L Y+A +E
Sbjct: 426 SYCDHHFRRLCLLDKASLSWEYRLSLLRATFGRAIEYCFESLHSQSNVDWSLLNYYAFVE 485
Query: 193 QSMGKDMVSARGVWERLLKIS--GAMLEAWQSYISMEIELDHINEARSIYKRCYS--KRF 248
+D AR +W L+K+ G+ E W YI E + + +++ + C
Sbjct: 486 AKYVEDKERARSLWTSLIKLPGHGSRAEYWIPYIQFE---QNWGDMKNLLRICAMAINSI 542
Query: 249 TGTGSEDICHAWLRFEREYGT-LEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKE 307
SE + LR E G ++ + + K+ R L S ++ +S+ A+
Sbjct: 543 NFDQSELLFQVVLRAVGETGVPVKQYRDIITKIHAR--RASLMESVKDVQSVKSDAEVPV 600
Query: 308 HSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQT 367
S++ + P R++ P +N+ K
Sbjct: 601 KSIES---------------KVPGSRKRKLPD-----------------HQNDSATVKSA 628
Query: 368 VEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDK 427
+P VP +E T F+SN++ + E ++ F G V+S+R++ D
Sbjct: 629 KVSKPNPTSHGTFVPHDPSK--NEFTVFVSNLDYSVSEEQIQHTFEKCGNVTSVRLVRD- 685
Query: 428 FTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+ G+S+G AYV+F + E + A+ ++Q
Sbjct: 686 YAGRSKGFAYVEFENKESVKTALTLDRQ 713
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID-DEHLAAAVAKN 453
F+ N++ EDL F G + S+R+ + G +G AY++F + D+ A VA N
Sbjct: 779 FVRNLDKTVKNEDLEMLFKQYGNIVSVRLATYR-NGVPKGHAYIEFTNADDASKALVATN 837
Query: 454 KQMFLGKKLSIARSNPKQRKDS----SGERAPTEQAQSHQQTGNAGTSAS 499
F K LS++ S P R +S S TE + + N G S+S
Sbjct: 838 GLEFRNKILSVSISEPPVRGESGPQGSKSITSTEDKKVFKTPQNIGLSSS 887
>gi|312371631|gb|EFR19765.1| hypothetical protein AND_21838 [Anopheles darlingi]
Length = 823
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 214/500 (42%), Gaps = 61/500 (12%)
Query: 4 ARAHLEEQISRQD----LSDSEKFQQYMIYLKYE---QSSGDPGRVQLLYERAITDFPVS 56
A+A L+ I +D L E Q+ +Y KY +S D VQ+LYER++ + +
Sbjct: 169 AKAALQRMIPHEDALAALESHEHQQRAELYRKYIADCRSELDDDEVQILYERSVAECCLD 228
Query: 57 SDLWLDYTQYL-----DKTLKVGNVVR----DVYSRATKNCPWVGELWVRSLLSLERSRA 107
+ +W+DY +YL D V V R D+ +RA +NC W EL+V + +ER +
Sbjct: 229 ATVWVDYLRYLRNCPPDVDENVSPVFRQTELDLVNRALRNCTWSAELYVEKMRIVEREQQ 288
Query: 108 SEEEISTV--FEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQ 165
+ +++ V E T E + ++L + LRR F E E RE +
Sbjct: 289 NRSKMTVVKIMEDVASAGLQTPEASVKVWLEYLTFLRRHTDFKSEKE--------REILR 340
Query: 166 RASDYLSEQMKNTDGLL-----RLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAW 220
D Q+ T G+L ++ +W LE + R +W +++ + +A
Sbjct: 341 ANFDLAWNQLGRTWGVLADPQCKILQFWGRLEYEALAEPNKGRDLWLSVMESADNATKA- 399
Query: 221 QSYISMEIELDHINEARSI--YKRCYSKRFTGTGSED---ICHAWLRFEREYGTLEDFDH 275
+ IE + R+ ++ Y K T G +D + AWLRFER GTLE
Sbjct: 400 ----GLWIEFTELEAKRNTDAVRKLYRKSITTVGLDDPETLAAAWLRFERCNGTLEQLVS 455
Query: 276 SVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQK 335
+ +E+ + S P K+ + G+E + + + + +K
Sbjct: 456 CQELCNATIEK---YYSTFIKPLRPAGKGAKQKADGAAGKEATNAATTATTAVDGSTARK 512
Query: 336 HAPQKPKKVHDKEKRQVQNLAEENEGRETKQT------VEEQPKKQPIKDAVPGRTKGFT 389
+ K+ HD+E + V + N K + E +P + P +
Sbjct: 513 NL----KRTHDQEFK-VPAIPPANADNTPKDSADKSSGAETEPTESPSNGDAAAKRAKLN 567
Query: 390 DECT----AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
D F+SN++ +AT +++R F ++ + SI ++ +GKSRG Y+ +
Sbjct: 568 DPSLESRQVFISNLSFEATEQEIRSAFPEL-SIESIELVLSS-SGKSRGFGYMLLSSESD 625
Query: 446 LAAAVAKNKQMFLGKKLSIA 465
+A A++ +++ G+ + I+
Sbjct: 626 VAQALSFDRRPLAGRPMFIS 645
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + + ++L+R F G + IRI+ + G+S+GLAY+++ + AV K
Sbjct: 670 FIKGLPFELGKDELQRLFEPFGTIRDIRIVCFR-NGRSKGLAYLEYESEAAAKRAVLKMD 728
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
Q + G +++A S P +K TE A++ +G+ + + SS+ + K+ +
Sbjct: 729 QHVIDGFTITVAISAPPPKK--------TEPAKNSSASGDDTAAGTSSSSLGSGKRQLAK 780
Query: 514 GDSVQLKGKNTFAVPRNV-RPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
GD +K K + +P V + PA TE KPKSND+FRK+ +K
Sbjct: 781 GD---VKQKLSAMIPTAVLKRTTAPAPNADTE-----KPKSNDDFRKLLLK 823
>gi|403339762|gb|EJY69142.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1016
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 217/494 (43%), Gaps = 44/494 (8%)
Query: 2 CNARAHLEE--QISRQDLSDSEKFQQYMIYLKYEQ---SSGDPGRVQLLYERAITDFPVS 56
NA + EE QI+ Q+L ++ +Q LK + + + + L +ER ++++ ++
Sbjct: 251 INAITNFEENFQIAYQELENNMDIEQMTNLLKKDLDHLAQDNFNYIMLYFERILSEYTLN 310
Query: 57 SDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEI---- 112
DLW Y Y D+ K + +++YS+A KNCP E W+ L LE++ S E I
Sbjct: 311 LDLWKIYIDYTDEKCKKKELKQEIYSKAVKNCPQEFEFWLGYLRELEKNEVSSEFIVETA 370
Query: 113 -----STVFEKSLLCAFSTFE---EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETF 164
+ FE S+ + + EY + I G++ + ++ V IR +
Sbjct: 371 NQALSNGTFEISIQFQYEVLKFLCEYHVRQIITIPGVKPNLENEATLQKV---KQIRAMY 427
Query: 165 QRASDYLSEQMKNTDGLLRLYA-----YWAHLEQSMGKDMVSARGVWERLLKISGAMLEA 219
+ D L EQ + D L+ + WA +E D + + E+ + +G + +
Sbjct: 428 MDSIDNLKEQNEG-DQFLQFFTEKLQLSWAEVEAYKISDKKQVQEIMEQFVTQNGLQMIS 486
Query: 220 WQSYIS-MEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQ 278
W +YI M + DH R ++KR +F + WL +E+++ T+++ D ++
Sbjct: 487 WANYIKLMRVFPDHEKTLRGLFKRGL--QFVKDNKAQLGELWLEWEKKFTTIQNVDQCIK 544
Query: 279 KVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAP 338
L++L L+ SQ P++ Q ++ + +KS+ +Q +++ P
Sbjct: 545 ----HLKKLNLY-SQIGKPQRPQTLQQPIQQEQEQPQRPQKSNK----DQERQDKKRKQP 595
Query: 339 QKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSN 398
+ +D+E Q + E E +E +E+ K Q D + K + + T +L
Sbjct: 596 ETNTFPNDQETNQKRPKREFQESKERPNKQQEKEKDQA--DLEEHKQKVRSQKKTLYLEQ 653
Query: 399 INLKATYEDLRRFFSDVGG---VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+N + ED+ F V + IR++ D+ GK RG A+VD E ++ N
Sbjct: 654 LNEETEEEDITALFIRVVADVKILDIRLIRDE-QGKKRGFAFVDVESQEMAEKSLLLNNY 712
Query: 456 MFLGKKLSIARSNP 469
G L I P
Sbjct: 713 NLKGSMLKIHIYKP 726
>gi|403333973|gb|EJY66125.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1017
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 217/494 (43%), Gaps = 44/494 (8%)
Query: 2 CNARAHLEE--QISRQDLSDSEKFQQYMIYLKYEQ---SSGDPGRVQLLYERAITDFPVS 56
NA + EE QI+ Q+L ++ +Q LK + + + + L +ER ++++ ++
Sbjct: 251 INAITNFEENFQIAYQELENNMDIEQMTNLLKKDLDHLAQDNFNYIMLYFERILSEYTLN 310
Query: 57 SDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEI---- 112
DLW Y Y D+ K + +++YS+A KNCP E W+ L LE++ S E I
Sbjct: 311 LDLWKIYIDYTDEKCKKKELKQEIYSKAVKNCPQEFEFWLGYLRELEKNEVSSEFIVETA 370
Query: 113 -----STVFEKSLLCAFSTFE---EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETF 164
+ FE S+ + + EY + I G++ + ++ V IR +
Sbjct: 371 NQALSNGTFEISIQFQYEVLKFLCEYHVRQIITIPGVKPNLENEATLQKV---KQIRAMY 427
Query: 165 QRASDYLSEQMKNTDGLLRLYA-----YWAHLEQSMGKDMVSARGVWERLLKISGAMLEA 219
+ D L EQ + D L+ + WA +E D + + E+ + +G + +
Sbjct: 428 MDSIDNLKEQNEG-DQFLQFFTEKLQLSWAEVEAYKISDKKQVQEIMEQFVTQNGLQMIS 486
Query: 220 WQSYIS-MEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQ 278
W +YI M + DH R ++KR +F + WL +E+++ T+++ D ++
Sbjct: 487 WANYIKLMRVFPDHEKTLRGLFKRGL--QFVKDNKAQLGELWLEWEKKFTTIQNVDQCIK 544
Query: 279 KVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAP 338
L++L L+ SQ P++ Q ++ + +KS+ +Q +++ P
Sbjct: 545 ----HLKKLNLY-SQIGKPQRPQTLQQPIQQEQEQPQRPQKSNK----DQERQDKKRKQP 595
Query: 339 QKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSN 398
+ +D+E Q + E E +E +E+ K Q D + K + + T +L
Sbjct: 596 ETNTFPNDQETNQKRPKREFQESKERPNKQQEKEKDQA--DLEEHKQKVRSQKKTLYLEQ 653
Query: 399 INLKATYEDLRRFFSDVGG---VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+N + ED+ F V + IR++ D+ GK RG A+VD E ++ N
Sbjct: 654 LNEETEEEDITALFIRVVADVKILDIRLIRDE-QGKKRGFAFVDVESQEMAEKSLLLNNY 712
Query: 456 MFLGKKLSIARSNP 469
G L I P
Sbjct: 713 NLKGSMLKIHIYKP 726
>gi|402584361|gb|EJW78303.1| hypothetical protein WUBG_10788, partial [Wuchereria bancrofti]
Length = 388
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 125/267 (46%), Gaps = 29/267 (10%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVS--SDLWLDYTQYLDKTLKVGNV 76
++EK M Y+ +E + DP R+Q+++ERA+ S SDLWL Y +LD +LK+ V
Sbjct: 78 ENEKLSILMEYIDFEMQTNDPARIQMIFERALCTVAASPSSDLWLHYGNWLDSSLKLPQV 137
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
DVY+R+ ++ P LW + +LERS AS EEI T + + T EE L+ T
Sbjct: 138 STDVYARSVRHAP-CSALWQQYFSALERSSASPEEIDTKWPDA-RDTIMTQEEGFSLYRT 195
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMG 196
I LRRR+ G + F D Q + L LY +
Sbjct: 196 YIYLLRRRVTNQG-----------LKKFGSNWDSPKAQYRKNHALF-LY--------TSA 235
Query: 197 KDMVSARGVWERLLKI-SGAMLEAWQSYISMEIELDHINEARS-IYKRCYSKRFTGTGSE 254
K A +W +L SG + AW ++E +N AR +YK S
Sbjct: 236 KQPEKALKIWNDILASGSGHLAAAWIEAANLERFFGDVNNARKLLYKAINS---ASDHPY 292
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVT 281
+ A ++FERE G+++D D ++QKV
Sbjct: 293 MVFDALIQFEREVGSIDDLDKALQKVN 319
>gi|330795642|ref|XP_003285881.1| hypothetical protein DICPUDRAFT_149785 [Dictyostelium purpureum]
gi|325084186|gb|EGC37620.1| hypothetical protein DICPUDRAFT_149785 [Dictyostelium purpureum]
Length = 877
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 125/564 (22%), Positives = 255/564 (45%), Gaps = 48/564 (8%)
Query: 3 NARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLD 62
N R E+ + + D++K+++Y L +E+ +G P RV L+ER + FP LW
Sbjct: 262 NERLPFEQALKETNYLDNKKWKEY---LDFEKKNGKPSRVVTLFERELKYFPNFFPLWRM 318
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRA-SEEEISTVFEKSLL 121
Y ++++TLK + V+SR+ ++ + G+ W + L L+ + A ++EE+ + F+++L
Sbjct: 319 YLGFIERTLKSKEMYFKVFSRSLRSIYYSGDHWSQYLRLLQHNPATTKEEMDSTFQRALY 378
Query: 122 CAFSTFEEYLDLFLTRIDGLRRRI----------LFSGEVEGVLDYSL--IRETFQRASD 169
T +Y ++ T ID R I G++ + + S I+ F+ ++
Sbjct: 379 SGLQTAHDYQLVYNTYIDYCWRYIQEREKNQQPPQSEGQMIIISEESKQEIKTLFETMNN 438
Query: 170 YLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLK-ISGAMLEAWQSYISMEI 228
Y+S + Y Y A E D R + +L+ + W YI E+
Sbjct: 439 YMSSIDTTNYTAIDRYMYIARFELEHFGDYQRYREILNYILESVDHTKYWIWSQYIQFEM 498
Query: 229 ELDHINEARSIYKRC-YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEEL 287
+ + R +YKR + +F S I W+ FER +GTL+++++++ + + +LE
Sbjct: 499 AFKNFDFVRELYKRASHGIKFDDPASR-IWQDWMEFERLFGTLDNYEYTIDQHS-KLE-- 554
Query: 288 RLFRSQQESKSL---PESADQKEHSVKKTGRE---KRKSDSNISYEQSPAKRQKHAPQKP 341
++ QQE + ++ +++ +K G E KRKS + E +++Q + Q
Sbjct: 555 --YKHQQEQEKFVQKNQTKEKEVEKKRKGGNETDTKRKSKKQKAEENGNSEKQTNKKQPE 612
Query: 342 KKVHDKEKR-----QVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFL 396
+ KE++ Q E+ + +E ++ E++ +K+ K+ + ++ F
Sbjct: 613 PSTNKKEQQPDEKKQKGKGKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEPNLPNKIIIF- 671
Query: 397 SNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQM 456
N+ + + +L+ F G + ++ D+ GKS+GLA++ F E ++ N+
Sbjct: 672 -NLPFETSERELKELFDKYGDIKHTALVLDR-NGKSKGLAFITFATHEMAQKSLELNQTK 729
Query: 457 FLGKKLSIA----RSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRG 512
+ +S+ +NP+Q+ ++ + E N ++ + +E QS G
Sbjct: 730 VGDRPISVQFAKDSNNPQQQHQNTHDNIDYENVSGLTVFINNLSNKLTKDKLEAFFQSNG 789
Query: 513 RGDSVQLKGKNTFAVPRNVRPLGF 536
+KG + RP +
Sbjct: 790 ------VKGIKDLRLVMKARPFAY 807
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T F++N++ K T + L FF GV I+ L + K+R AY+D ID E+L AA+A
Sbjct: 765 LTVFINNLSNKLTKDKLEAFFQS-NGVKGIKDL--RLVMKARPFAYMDLIDKENLKAAIA 821
Query: 452 KNKQMFLGKKLSIARSNP 469
N + F+G +++ S P
Sbjct: 822 VNGKYFMGNHINVYLSKP 839
>gi|157131013|ref|XP_001655777.1| hypothetical protein AaeL_AAEL011961 [Aedes aegypti]
gi|108871686|gb|EAT35911.1| AAEL011961-PA [Aedes aegypti]
Length = 886
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/464 (22%), Positives = 196/464 (42%), Gaps = 56/464 (12%)
Query: 21 EKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTL----KVGNV 76
E+ + Y Y++ +S Q+LYER++TD + +W DY +YLDK +
Sbjct: 278 ERAELYREYIRECRSQLGDDETQVLYERSVTDCCLDPTVWCDYLKYLDKYPPDEDEDSAS 337
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
+ +RA +NCPW EL+V + ER R + ++ + E+ F E + ++L
Sbjct: 338 PETLVNRALRNCPWSAELYVEKMRIFERERRDKADVLKIMEEVATVEFKAPEPAVKVWLE 397
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM-KNTDGLLRLYAYWAHLEQSM 195
+ LRR E E ++R F+ A + L + D ++ +W LE
Sbjct: 398 YLTYLRRHCHLEDEKER----DILRSNFELAWNQLGRTWGEMADPECKILQFWGRLEYGS 453
Query: 196 GKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSI--YKRCYSKRFTGTGS 253
D + R +W+ ++ S + + + IE + R ++ Y K G
Sbjct: 454 LGDPLKGRELWQNVMDSSDNC-----TRVGLWIEYAELESKRGTDPVRKVYRKAIGAVGL 508
Query: 254 ED---ICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQE----SKSLPESADQ- 305
D + AW+RFER G+LE + +E SQQ +S P
Sbjct: 509 NDPETLAAAWMRFERCNGSLEQLASCQELCMATIEAYYKTLSQQRYAKGRRSDPAKGSHV 568
Query: 306 ----KEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEG 361
K+ +K+ E +SD + ++++ P+KP+
Sbjct: 569 NDSPKKKPLKRANDEHPRSD-DTAFKEPSISVGPSVPKKPEP------------------ 609
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSI 421
++E+ K+ + + P T D SN++ + T + +R F ++ SI
Sbjct: 610 -----SLEDTTKRIRLDEPKPVDTSN--DSKRLIFSNLSFEITEDQIRATFPEL-KFKSI 661
Query: 422 RILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
++H +GKSRG YV+F +++ + A++ +++ G+ + I+
Sbjct: 662 ELVHGS-SGKSRGFGYVEFENEQDVQKALSFDRRPLDGRPVFIS 704
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 36/180 (20%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + +AT +D+R+ F G + +R++ + S+GLAYV E+ + AKN
Sbjct: 729 FVKGLPFEATNDDVRKLFEPYGKLKDVRVV---YYCSSKGLAYV-----EYESEVAAKNA 780
Query: 455 QMFL------GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
+ L G +++A S P R G T + +Q G+ G K
Sbjct: 781 VLHLDQHNMNGSTITVAISAPPPR----GNPTATTTVKEVEQPGSLG----------AEK 826
Query: 509 QSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKP----KSNDEFRKMFIKK 564
+ +GD+ K K + +P + F A P + KSN++FRK+ +KK
Sbjct: 827 RHLVKGDA---KMKLSSMIPTALL-WKFAAAGPSGSSAARIASADIHKSNEDFRKLMLKK 882
>gi|358055630|dbj|GAA98461.1| hypothetical protein E5Q_05147 [Mixia osmundae IAM 14324]
Length = 1071
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 204/477 (42%), Gaps = 54/477 (11%)
Query: 24 QQYMIYLKYEQSSGDP--GRVQLLYERAITDFPVSSDLWLDYTQYLDKTL------KVGN 75
+ Y Y+ +E P V+ L+ERA+ D P S DLW Y ++L +TL ++
Sbjct: 278 EAYTSYIDWELEVDAPDLALVEGLFERAVNDNPASVDLWDQYLRHLTRTLPTIDLEEIDE 337
Query: 76 VVRD---------------VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK-- 118
V D V RA K P G+LW L LER E++ +FE+
Sbjct: 338 VDTDAAILALANAQQQLVAVAERAVKAIPGAGQLWATYLRILERCD-QREQVQPLFERAT 396
Query: 119 SLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQM--- 175
++ F T + +DLF + D RR E V E FQ +D L++ +
Sbjct: 397 AIRAVFDTVDSLVDLFTAKTDFHRR----DWEAVVVAQTKEPDELFQEPADILNQGINTI 452
Query: 176 ----KNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELD 231
++ D RL Y + L + G+ +A VW+R + A +Y +E +
Sbjct: 453 NKRSRDGDPQCRLQHYLSRLLERFGQPDEAA-AVWKRATTKHSDVAAAHIAYAELEARRN 511
Query: 232 HINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR 291
+ AR IY+R KR E + AW FE ++GT+E + + + + +++ + R
Sbjct: 512 NTEAAREIYERGAGKRL--DYPEYLFSAWRSFEHQHGTIETLEKASRTIEQKMKGVNARR 569
Query: 292 SQQESK---SLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE 348
+++ + S A Q + +T E + ++ S PA +
Sbjct: 570 RKEQEQLYASYAAQAPQPASTAVETAVEPAQPVASTS--AVPAASASPMLDTRPTENGSS 627
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDL 408
KR+ ++ E E ++++E+ K+ K + T +S + + +
Sbjct: 628 KRRAEDSPEAVE-----ESIDEEGKRAKTAHTPAQDLKRDREHTTVIVSGLPMSTKEPAI 682
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
RR F D G + ++ +H K G +A ++F+ + + AA+ K+K+ +++S+A
Sbjct: 683 RRLFKDCGDIRELQ-MHAKTDG---AVASIEFVARDSILAALTKDKRRVEDQEISVA 735
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 382 PGRTKGFTDECT----AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAY 437
P R + TD T +S + DLR+ F+ G V++IRI D G RG A+
Sbjct: 817 PDRKRARTDADTHRREILVSQLTPFVKEYDLRKLFTPCGVVTAIRIQTDA-KGLCRGAAF 875
Query: 438 VDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
VDF D A A+ N F + +++ ++ + K+ E
Sbjct: 876 VDFEDVAGAAKALELNNTEFKKRHIAVVLASQRGLKEKQPE 916
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 199/468 (42%), Gaps = 50/468 (10%)
Query: 21 EKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDV 80
+ F Y+ + K + + G+ +Q LYERA++ + LW Y Y+ K+ + +
Sbjct: 251 DAFNAYLSFEKKQANGGNIKFIQTLYERALSLHCLDPTLWNSYLIYMTVWDKLPTTLVSI 310
Query: 81 YSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL--LCAFSTFEEYLDLFLTRI 138
RA +NC G LW L +R +++ +++++ L F++ L + +
Sbjct: 311 AERAVRNCMTSGPLWCHLLRIKTIARKPRSDVTEDYQRAIRFLSMAGDFQQILAVAMCHC 370
Query: 139 DGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKD 198
+ + I F + +R FQ + YL + + N D L + +WA E+ KD
Sbjct: 371 EVELKCIAF----DDTYTPDTVRAVFQETAMYL-DAITNIDPLAKFQRFWAKAEEYFFKD 425
Query: 199 MVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICH 258
+ +AR ++ ++K + EAW ++ EI D+I++ARS+ K+ + E I
Sbjct: 426 VSTARNIYHIVVKRVPFLTEAWLEFVQFEIRHDNISKARSLLKQAALQ--NTNAPEQIYE 483
Query: 259 AWLRFEREYGTLEDFDHSVQKV---TPRLEELRLFRS-----QQESKSLPESADQKEHSV 310
W+ FER G L+ ++ K+ RL ++R +S Q + + A Q +H++
Sbjct: 484 QWIEFERIRGGLDTLYEALDKIHVLQARLAKVRDAKSTGVGDQYHAAATCLIASQNQHAI 543
Query: 311 KKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQ-VQNLAEENEGRETKQTVE 369
+DS P V + +KR V+N AE + R +
Sbjct: 544 --------SADS----------------ASPLLVENTKKRSVVENEAEAHSKRAKIEEAI 579
Query: 370 EQPKKQPIKDAVPGRTKGF--TDECTA----FLSNINLKATYEDLRRFFSDVGGVSSIRI 423
+P ++P +PG + + A +LS ++ T + + F G V + +
Sbjct: 580 HEPSQEPHAGKLPGSLAEYKVINNSMAGNMVYLSKLSQNTTESTILKHFGVYGQVEDLFM 639
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
++ +G+ A+V+F E + V G ++ R P Q
Sbjct: 640 QPNEESGELE--AFVEFSKAELVRKIVLDGPISINGTVVTPCRCRPSQ 685
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 366 QTVEEQPKKQPIKDAVPGRTKGF-TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL 424
Q V E+ + I A+ TK D ++SN++ T +DL+ FS G +S++R++
Sbjct: 755 QAVIEKTGDRKIGVAISDPTKKMQIDHKKLYVSNLSHTMTEDDLQELFSKFGEISALRVV 814
Query: 425 HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRK-DSSGERAPTE 483
G S+G+A+V++ ++H A+ N M G+ + ++ S+P RK S+ E A T
Sbjct: 815 RMP-NGNSKGIAFVEYNQEDHAKEAMTLNGTMVDGRLIVVSVSDPNLRKGKSTMESARTA 873
Query: 484 QAQSHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFA-VPRNVRPLGFPAIKPK 542
+ Q + ++A+ I++ SV+ N+ A PR VR A K +
Sbjct: 874 GKEKTQLNATSSSTAATSKDIKSD-------SSVKFTATNSMAFTPRAVR-----APKKR 921
Query: 543 TEEGEDLKPKSNDEF 557
+K K +D F
Sbjct: 922 GRSSIVIKAKPDDAF 936
>gi|303282293|ref|XP_003060438.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457909|gb|EEH55207.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 866
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 202/501 (40%), Gaps = 96/501 (19%)
Query: 24 QQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSR 83
+ + + E+ GD R Q +ERA+ P W YT YLD L+V + + R
Sbjct: 311 KAFRALTELEERDGDAARTQCAHERAVAATPTDPRAWRRYTAYLDHELRVRTIAAPAHER 370
Query: 84 ATKNCPWVGELWVRSLLSLERSRASEEEISTVFE-KSLLCA----FSTFEEYLDLFL--T 136
A + C GE ++ S R+ A+E + + + + C T E+ L +FL +
Sbjct: 371 AMRCCVGDGE----TIASAIRAFAAEGDANGARQLATTACGDERRSRTSEDVLAVFLAVS 426
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMG 196
RI G D + R + A ++++ N L L A +E S
Sbjct: 427 RIAG---------------DATARRGVAEEARKLMAKKPANAAATLALATETADVEAS-A 470
Query: 197 KDMVSARGVWERLLK---------ISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKR 247
+D ++ VWE +K +S + + + R+I+K +S+
Sbjct: 471 RDRLA---VWESFVKGDKKSGGGELSNVAEAHARHAEAAFAVDGRADAGRAIFKNVFSRP 527
Query: 248 -------FTGTGSEDICHAWLRFEREYGTLED----FDHSVQKVTPRLEELRLFRSQQES 296
G+G +C AWL FER++G D D K+ LR +++
Sbjct: 528 NLESAAPANGSGRAVVCRAWLEFERKHGDAPDSYARADAKAGKI------LRAIEAEERE 581
Query: 297 KSL--PESADQKEHSVKKTGREKRKSDSNISYEQSP------------------AKRQKH 336
K L PE A R +R +D N Y+ P AKR+
Sbjct: 582 KKLVTPEEAT----------RMRRANDPN--YKNGPKATAAAADDDDDAGGGGGAKRKAV 629
Query: 337 APQKPKKVHDK-EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG----RTKGF--- 388
+ D+ KR + + + +E+ +K P A P + K F
Sbjct: 630 GGDDASREDDRASKRARGDGDGDGGEDGGEDARDERSRKGPGLGADPAERAAKYKEFFPD 689
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ TAF+ N+ T E+L FF GG RI+ DK TG+SRG AYV+F ++ L
Sbjct: 690 RDQRTAFVKNLPFNCTEEELSGFFDGRGGGVRARIVRDKATGRSRGFAYVEFDEEGALQL 749
Query: 449 AVAKNKQMFLGKKLSIARSNP 469
A+ ++ F + LSIARS P
Sbjct: 750 AIMRDGATFQDRPLSIARSMP 770
>gi|348668624|gb|EGZ08448.1| hypothetical protein PHYSODRAFT_352836 [Phytophthora sojae]
Length = 1017
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 216/502 (43%), Gaps = 79/502 (15%)
Query: 21 EKFQQYMIYLKY--------EQSSG--DPGR--VQLLYERAITDFPVSSDLWLDYTQYLD 68
+ +QQY+ ++K+ E++ G + GR V LYERA+ +S LW Y +YL+
Sbjct: 322 QAWQQYLNFVKHRVAPLMSSEKAGGASEQGRQLVMCLYERAVAVMCLSPSLWASYLEYLE 381
Query: 69 KTLKVGNVVRD------VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC 122
+ + R+ V RA +N P+ W L+ +ER + IS + + LL
Sbjct: 382 PSQDDEDNGRNNFGKLQVARRAVRNVPFDSSAWTEYLIEMERQNKPNQAISELVQTELLA 441
Query: 123 AFST-FEEY--LDLFLTRIDGLRRRI---LFSGEVEGVLDYSLIRETFQRASDYLSEQMK 176
S +++ L++ LT D +RRR + +++ + SL+ F ++++
Sbjct: 442 RSSPPMDQFHLLNVLLTWCDSVRRRASMAIIDDDLDRIAAESLVERVFSDCEQFITKTFP 501
Query: 177 N-TDGLLRLY-----AYWAHLEQSM-----GKDMVSARGV---W-ERLLKISGAMLEAWQ 221
+ DG +RL YW + + K + R V W ++L G +W
Sbjct: 502 DFLDGRVRLAEYQAKCYWLLMNREGWTPPDHKHTMKERKVAKFWKDKLDTTLGDQAASWI 561
Query: 222 SYISMEIELDHINE-----ARS-IYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDF-- 273
+Y+ L + N RS +++R + + AWL FERE+G L +
Sbjct: 562 AYLEA---LRYTNAYPVDIMRSMVFERAVER--VKDSPLVLAEAWLAFEREFGNLRGYLR 616
Query: 274 ---DHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSP 330
H+ + T + + ++ + +AD S K + +K +N S + S
Sbjct: 617 ARRYHTKHRSTAQAT------ANIQAPAASATADPAPASADKKMKPSKKRKANASDKSS- 669
Query: 331 AKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTD 390
QK P PK+ D+E EG + +E K+ + T+
Sbjct: 670 ---QKQPP--PKRAKDQET--------SVEGGDATTAMEVDATKKAKSAEKKNAHESLTN 716
Query: 391 ECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG---KSRGLAYVDFIDDEHLA 447
E T FL N++ +AT +D+ F D+ + +R++ K G KSRG+AYV F D+ +
Sbjct: 717 EHTLFLCNVDKEATQQDIEALFRDIPTLKEVRLVV-KTRGDRVKSRGMAYVQFTDEAGVE 775
Query: 448 AAVAKNKQMFLGKKLSIARSNP 469
+ +N + G L + RS P
Sbjct: 776 EGLKQNGCLLHGHPLRVERSKP 797
>gi|452821170|gb|EME28204.1| nucleolar RNA-binding protein-like protein [Galdieria sulphuraria]
Length = 687
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 196/453 (43%), Gaps = 57/453 (12%)
Query: 29 YLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNC 88
Y ++E +S D R +++YER + + DLWL Y +L + ++ ++ +C
Sbjct: 229 YAEFE-TSVDLLRAKMIYERGLRNCYFVPDLWLFYLGFLTDHFPLSDLNTQATTKKAFSC 287
Query: 89 -PWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYL-DLFLTRIDGLRRRIL 146
P E+ ++ + ERS E+S +F K+ S F E+L L L+ + LRR L
Sbjct: 288 VPNSVEIAKYAMRAQERSDNGFHELSNIFWKAW-SVMSMFPEHLVQLSLSYLHCLRR--L 344
Query: 147 FSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDG---LLRLYAYWAHLEQSMGKDMVSAR 203
+ E +S I FQ+ D ++ + + D +LR A E + + + R
Sbjct: 345 CTDERLDKKYFSEILSDFQKTFD--NDALASADPSCQILRFIA--GCFEVVLRGSVENIR 400
Query: 204 GVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRF 263
VWE++L+ G + W YI EI + AR +++R E + W+ F
Sbjct: 401 NVWEQMLRKHGKLANTWLRYIHWEIHQQNYENARRLFRRGIHT--VVEEVEILAQEWIGF 458
Query: 264 EREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSN 323
E YG D+S Q K+L + ++K + + + R S++
Sbjct: 459 EGLYG-----DNS-----------------QYEKALKVTNERKTFCERISTQPSRNSNAK 496
Query: 324 ISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG 383
S+ Q R K P++ K D + Q N+ N + T G
Sbjct: 497 PSFSQKEDYRSK--PKRMKTKKDDSEHQ-NNMLSLNSLQSTS----------------IG 537
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDD 443
K D T F+SN+ T ED + F V G R++ D+ G +G YV+F ++
Sbjct: 538 DRKWHKDLHTIFVSNLPKTTTEEDFQSLFQSVDGFLEARLVKDR-EGIPKGFGYVEFQNN 596
Query: 444 EHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
+ A+ ++ MFLG+K+ + RS P + + SS
Sbjct: 597 IGVREALKADQSMFLGQKIIVKRSKPPRFQMSS 629
>gi|339238293|ref|XP_003380701.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
gi|316976387|gb|EFV59689.1| putative squamous cell carcinoma antigen recognized by T-cells 3
[Trichinella spiralis]
Length = 1241
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 212/487 (43%), Gaps = 74/487 (15%)
Query: 25 QYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRA 84
++ Y+ +E P R+Q+L+ERAI LWL Y +L++ + + +V VY RA
Sbjct: 304 KFSAYIDFEMKQKSPARLQVLFERAILHCYTDETLWLRYLNWLNENMNLPDVTLPVYGRA 363
Query: 85 TKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRR 144
++CP ++ LL+ ER + IS V +L ++S E ++L LT I +R
Sbjct: 364 VRSCPRSMKIRQMYLLACERFKCDWSIISKVMTDALEISYSQLET-VELLLTHIYQRKRF 422
Query: 145 ILFSGEVEGVLDYSLIRET-FQRASDYLSEQMKNT-DGLLRLYAYWAHLEQSMGKDMVSA 202
I G G + ++ F+ ++ L ++ D WA KDM +A
Sbjct: 423 ISTEG---GHFTWKCAQQKGFEDGAEILKDRFHGAWDADFWYRQSWARFAADDCKDMNAA 479
Query: 203 RGVWERLLKISGAMLEA-WQSYISMEIELDHINEARSIYKRC---YSKRFTGTGSEDICH 258
R +W+ ++ +G W Y+ +E + SIY++ S+ +E
Sbjct: 480 RLLWKEIMHEAGGTNPTLWLDYVWLERQHGDFQHVCSIYQQAANSLSEHHAALFAE---- 535
Query: 259 AWLRFEREYGTLEDF---DHSVQKVTPRLEEL----RLFRSQQESKS------------- 298
WL++ E GTL+D H +++ RL+++ +L R +Q+ +
Sbjct: 536 -WLQYVNEKGTLDDVLSTMHRIERHQMRLKDIQSKGKLQRKKQQQTAKKRAEQQEEEVGE 594
Query: 299 -LPESADQKEH-SV--------KKTGREKRKSDSNISYEQSPAKRQKHA----------P 338
L SA Q++ SV K + ++ K DS + E S A ++ A P
Sbjct: 595 ELLNSAMQRDGVSVKPYVSVGEKASSKDHFKKDSLGTVEISTAVGREDAVQVDADGFLIP 654
Query: 339 QKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSN 398
PKK E Q AE E + T +T ++ K T F+SN
Sbjct: 655 PVPKKTKTAESHAKQ--AEVVE-QSTLETTNDKSTKHA---------------NTVFVSN 696
Query: 399 INLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFL 458
++ + E L+ ++ G V +R++ + +S+G AYVD+ D+ + A+ +++
Sbjct: 697 LDFALSKERLKDTMAEAGEVVDVRMIMLR-PNRSKGYAYVDYKDEASVKKALKMDRRCID 755
Query: 459 GKKLSIA 465
G+ + ++
Sbjct: 756 GRPMYVS 762
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA--AAVAK 452
F+ NI AT ++ F G + S+R++ K +G+S+GLAYV+F D+E A A + +
Sbjct: 793 FVKNIPTFATENEVETLFRQYGDLRSVRLVLHK-SGRSKGLAYVEF-DNEEAAERARLGQ 850
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTS 497
N FLGK+LS+ SNP R+D R+ + A+ Q + GTS
Sbjct: 851 NGAHFLGKRLSVEFSNPPPRQD----RSSSTFARKSQNPYSGGTS 891
>gi|347968945|ref|XP_001237407.3| AGAP002959-PA [Anopheles gambiae str. PEST]
gi|333467769|gb|EAU77058.3| AGAP002959-PA [Anopheles gambiae str. PEST]
Length = 913
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 211/510 (41%), Gaps = 82/510 (16%)
Query: 21 EKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLK------VG 74
E+ Y Y+ Q+ D VQ+LYER +T+ + +W +Y +YL +
Sbjct: 276 ERADLYRKYIADCQTLLDDDEVQILYERMVTECCLDGAVWHEYVRYLHRCPPDAEDNTAS 335
Query: 75 NVVR----DVYSRATKNCPWVGELWVRSLLSLER--SRASEEEISTVFEKSLLCAFSTFE 128
V R D+ +RA +NC W EL+V + +ER + S+ I + E T E
Sbjct: 336 PVFRQTELDLVNRALRNCTWSAELYVEKMRIVERQATPTSKMTILKIMEDVASAGLQTPE 395
Query: 129 EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLL-----R 183
+ ++L + LRR F+ E E R+ + D Q+ T G+L +
Sbjct: 396 ASVKVWLEYLTYLRRVTDFASEKE--------RDILRANFDLAWNQLGRTWGVLADPQCK 447
Query: 184 LYAYWAHLEQSMGKDMVSARGVWERLLKIS--GAMLEAWQSYISMEIELDHINEARSIYK 241
+ YW LE + R +W ++ S + + W +I ME + +
Sbjct: 448 ILQYWGRLEYEALGEPNKGRDLWYSVMASSDNSSRVGLWIEFIEMEAK-----RGPEAAR 502
Query: 242 RCYSKRFTGTGSED---ICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKS 298
+ Y K T G +D + AWLRFER G+LE + +E + +++ SK+
Sbjct: 503 KLYRKSITTAGLDDPETLAAAWLRFERCNGSLEQLISCQELCNATIE--KYYKTI--SKN 558
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKH-------APQKPKKVHDKEKRQ 351
P + K + G K DS+ S AKRQ +P KKV KR
Sbjct: 559 GPSNRATKGKRPEAMGTTAHK-DSD----ASAAKRQASSMDGAGGSPPGKKKV----KRT 609
Query: 352 VQNLAEE-NEGRETKQTVEEQP-----------KKQPIK-------DAVPGRTKGFTDEC 392
NL++ E +E +T P K +P K D+ G
Sbjct: 610 NDNLSDTVGERQEEFKTPAIPPLHSSSKNHDHSKPEPSKPQTVIDIDSESDAKAGGDQSR 669
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
F+SN++ + T D+R F D+ + SI ++ +GKSRG Y+ E + A++
Sbjct: 670 QVFVSNLSFEVTETDIREIFPDL-AIESIELVASS-SGKSRGFGYMQLASAEEVPKALSF 727
Query: 453 NKQMFLGKKLSIAR------SNPKQRKDSS 476
+++ G+ + I+ + P Q K SS
Sbjct: 728 DRRPLNGRPVFISNVARDKTTRPHQFKYSS 757
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 22/170 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + E+LRR F G + IRI+ + +GKS+GLAY+++ + AV K
Sbjct: 765 FIKGLPFNLGQEELRRLFEPFGSIKDIRIVCFR-SGKSKGLAYLEYETETSAKNAVLKMD 823
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
Q + G +++A S+P +K+ PT + + T + G S SS+ + K+ G+
Sbjct: 824 QHVIDGFTITVAISSPPPKKN------PT----AAEPTLSVGDSGGSSSSLGSGKKLLGK 873
Query: 514 GDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
D +K K + +P V +K + KPKSND+FRK+ +K
Sbjct: 874 WD---VKQKLSPMIPTAV-------LKRSAAAASEEKPKSNDDFRKLLLK 913
>gi|409042148|gb|EKM51632.1| hypothetical protein PHACADRAFT_261883 [Phanerochaete carnosa
HHB-10118-sp]
Length = 911
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 199/460 (43%), Gaps = 38/460 (8%)
Query: 23 FQQYMIYLKYEQSSGDPGRVQL--LYERAIT---------DFPVSSDL---WLDYTQYLD 68
+ Y Y+ E+ P L LYERAIT D S L WL Y L
Sbjct: 125 LEGYAYYIASEKRGKKPDLFILDTLYERAITEADKRRFDGDIGAESALRAFWLGYVDNLR 184
Query: 69 KTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFE 128
+ + V + RAT++ P GE+W R L LER ++ ST + ++
Sbjct: 185 QHDEDEEVQLTTFKRATRSVPSCGEIWARYLQCLERIGRGDQIDSTYHSAISVSLLTSDV 244
Query: 129 EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYW 188
+ L + G RR S E + T + K+ D LRL Y+
Sbjct: 245 DQLVPVVQAKAGYERREAESKEGAPEDGFEAALATLLEGIGRVRTASKSGDPQLRLEKYF 304
Query: 189 AHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRF 248
+ L + A +WE K AW ++ + I+ +AR I++ +K
Sbjct: 305 SALCTEVANMAEHAVIMWEDATKFYKTSYLAWMAHADILIKQRLYIDARKIFRDVGNKNL 364
Query: 249 TGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEH 308
E I +AW++FE +G++E+ + + +V E++ R++ A++ +
Sbjct: 365 DW--PEVIWNAWIQFEHVHGSVEELEDCLDRVERAREKVNAKRAK--------DAEKAAY 414
Query: 309 SVKKTGREKRKSDSNISYEQSP--AKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQ 366
+ E++ + +++ P A + + A + P V DK ++Q EN G+ +
Sbjct: 415 EAMQVAAEQQAAGVSVAGVLVPDVAPQTQAAEEAPMDV-DKTRQQ----RSENGGKRKAE 469
Query: 367 --TVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL 424
V E+ KK+ +A P K + CT F++++ T +DLR F D G + I+I
Sbjct: 470 DELVPEESKKRHT-EASPAPLKRDRENCTVFVAHLPTDTTEDDLRTLFKDCGPIREIKIT 528
Query: 425 HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+ + +A V+F++ E + AA+ K+K+ G+++++
Sbjct: 529 ----SMPNSLVATVEFMERESVPAALTKDKKRIHGEEIAV 564
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 198/462 (42%), Gaps = 50/462 (10%)
Query: 24 QQYMIYLKYEQSSGDPGR---VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDV 80
Q+Y+ Y+ +E S P Q+L+ERA+ D P S +LWL++ +YL+ + +
Sbjct: 297 QEYLKYISWEISR-KPSHFDLAQMLFERALADHPNSVELWLEFLRYLNHHRDQHALSAAI 355
Query: 81 YSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAF--STFEEYLDLFLTRI 138
RAT+ PW GE+W ++ + ER+ + E + + +++ F E + + R
Sbjct: 356 VKRATRTVPWSGEIWACAIRTFERNNQTIEAVEGLCARAIQSKFLEHDIEALISFTIGRA 415
Query: 139 DGLRRRI---LFSG------EVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYW 188
D RRR+ + +G +V+ ++D ++ D + + T D RL Y
Sbjct: 416 DFHRRRLDAYIVAGGNENAEQVKSLID--MVANVLHHGIDTTKKVLAKTGDPSCRLEKYL 473
Query: 189 AHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRF 248
A + ++ +A+ VW++ K W S E + AR YK+ S
Sbjct: 474 ATFFEHHDREDDAAK-VWQKATKQYRNASSPWISAAECEARRGDLTRAREYYKK--SSNI 530
Query: 249 TGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR---SQQESKSLPESADQ 305
E + AWL FE +G L+D ++++ KV ++ + R ++Q S++L +++
Sbjct: 531 KLDYPEYLLEAWLTFEHHFGALDDLEYAISKVNNLMKGISARRKREAEQNSETLAQNSSL 590
Query: 306 KEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETK 365
G AP + + + KR+ + +AE G +
Sbjct: 591 DNTVGDDAG--------------------GRAPAETDENSETRKRKAETIAETKGGDKKI 630
Query: 366 Q--TVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
+ T+ + VP K + T ++ + + + + + F D G + I I
Sbjct: 631 KLNTLPTEATTSTNAGEVP-ELKRDRENSTVLVAGLTPETSEAKISQLFRDCGRIREIAI 689
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
K + + +A V+F D + A K+K+M G +++++
Sbjct: 690 --HKISSEDV-VATVEFEDRASVLPAQTKDKKMLDGVEVAVS 728
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDD 443
R+ +E +++ ++ +DLR+ FS G + +R++ D+ G S+G A+V+F ++
Sbjct: 816 RSDNHANEKELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQ-AGHSKGFAFVEFQNE 874
Query: 444 EHLAAAVAKN----KQMFLGKKLSIARSNPKQRKDSS 476
AA++ N K+ +G +S A+ RK+++
Sbjct: 875 MSAKAALSMNNVELKKRRIGVTISSAKGLSLARKNTT 911
>gi|390603148|gb|EIN12540.1| hypothetical protein PUNSTDRAFT_81810 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1034
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 197/487 (40%), Gaps = 60/487 (12%)
Query: 10 EQISRQDLSDSEKFQQYMIYLKYEQSSG--DPGRVQLLYERAITDF------------PV 55
E++ S + Y Y+ YE+ + D ++ERAI + P
Sbjct: 238 ERLENAVTSSNNSLHAYAEYITYERRARYLDLLVASGVFERAIAEAAKRRFHGEAEGEPA 297
Query: 56 SSDLWLDYTQYLDKTLKVGNV-----VRDVYSRATKNCPWVGELWVRSLLSLERSRAS-- 108
W QYLD TL+ V + + RA ++ P GE+W R + +ER ++
Sbjct: 298 LRAFW---AQYLD-TLRSSQVADASKMLEAAKRAVRSVPASGEVWARYIRLIERVSSAPS 353
Query: 109 ---------EEEISTVFEKSLLCAF--STFEEYLDLFLTRIDGLRRRILFSGEVEGVLDY 157
E +S V+ K+L E+ + L L R G R + SG +
Sbjct: 354 DGNGAAMQPSESVSDVYAKALSTNLVQQDVEQIIPLVLARA-GYEARRIESGSADEDTPG 412
Query: 158 SLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAML 217
L+ +T + + + + + D LRL Y A S+ +A VW+ K
Sbjct: 413 ILV-QTLEDGINMVRKASPDGDPRLRLEKYLAQFYASIVDLPEAALEVWKGATKHYKNSY 471
Query: 218 EAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSV 277
AW +Y + ++ AR+++ K E I AWL E +G+LE + +
Sbjct: 472 IAWTAYTDLLVKQHDYETARAVFSDVCLKNLDW--PEAIWEAWLSMEHLHGSLEQLEACM 529
Query: 278 QKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHA 337
KV + R+++ A++ + + E+ S P H
Sbjct: 530 DKVERAQSNVNFKRAKE--------AEKASYQALQVAMEQAAS--------VPVAEVIHP 573
Query: 338 PQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLS 397
Q + D + ++AE N R+ + + + K+P D P + K + CT F++
Sbjct: 574 EQYVEAPMDVDSAPSIHIAESNAKRKAEDQPDAESSKKPKLDTTPAQLKRDRENCTIFVA 633
Query: 398 NINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMF 457
++ + DL+ F D GG+ I+I K +A V+F + E + AA+ K+K+
Sbjct: 634 DLPVNTAEGDLKALFKDCGGIRDIKIT--KLPNAV--VATVEFNERESVPAALTKDKKRI 689
Query: 458 LGKKLSI 464
G+++++
Sbjct: 690 HGEEIAV 696
>gi|357631625|gb|EHJ79094.1| hypothetical protein KGM_15573 [Danaus plexippus]
Length = 886
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 198/452 (43%), Gaps = 36/452 (7%)
Query: 40 GRVQLLYERAITDF---PVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWV 96
G +++LY+RA T+ S DL L +++ + R ++ T+ CP WV
Sbjct: 296 GILKVLYDRATTECISCEASHDLLLALAKHVQAISSRATIHR-IHDLCTRRCPRRHTFWV 354
Query: 97 RSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLD 156
+ E S EE+ ++FE +L T++E L+++ ++ +RR F + E V
Sbjct: 355 LKMQQAEHEEKSFEEVKSLFETALSKGMETYKEAEKLWMSYLEYIRRATSFDNK-EHV-- 411
Query: 157 YSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKI--SG 214
+R TF+ A D L+E + + +WA LE KD V + ++E + K +
Sbjct: 412 -DRLRRTFRLAWDSLAEAWGDEANDCEVPLFWARLEYKQIKDPVQGKEIFEEIFKYGENK 470
Query: 215 AMLEAWQSYISMEIELD-HINE-ARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLED 272
+ + W++ I +E+ D +N+ R +++R R + W +ER+ G L
Sbjct: 471 TLSKYWEALIHLEVNRDPPVNKRLRDLHRRAL--RSVSDYPPAVARLWSDYERDCGGLST 528
Query: 273 FDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAK 332
+ +L+E R + K L K+ + KK +K K+ + + + K
Sbjct: 529 LVECQEMCERKLKEWRDNYQAMKEKMLGYKQKGKQQTNKKIKIDKAKT---VDQKSNKGK 585
Query: 333 RQKHAPQKPKKVHDKEKRQVQNLAEENEG--------RETKQTVE-EQPKKQPIKDAVPG 383
R+ + KV K+ + E +G + +E ++P+K + G
Sbjct: 586 RKSDNTSEEVKVKRKKDDNMDVDESEKDGDSGVKRPHDDNDHVIETKRPRKDSSSEDAVG 645
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILH--DKFTGKSRGLAYVDFI 441
R + CT F+SN++ K +LR S+ G + S+R+ F G + Y +
Sbjct: 646 R-----EACTLFVSNLDFKFNENNLRNKLSEFGEIVSMRVRAGVKAFGG---SICYCQYK 697
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIARSNPKQRK 473
E + A+ ++ + G+ + ++R + K+ K
Sbjct: 698 TTESVDEALKHDRTVLDGRPMFLSRYSSKKTK 729
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 33/179 (18%)
Query: 389 TDECTAFLSNINLK-ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
T++ F+ N+ T E L F G ++ IRI+ K GK +GLAY+D+ D+E +
Sbjct: 738 TEKNKLFVRNLPFSHCTKEALAEIFDKYGKLNDIRIVTFK-DGKPKGLAYIDYEDEESAS 796
Query: 448 AAVAKNKQMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIET 506
A++K + + + + +A S P + GE T S ++ G ++ SS
Sbjct: 797 VALSKTNGLLVKDRNIEVAVSAPPPK----GE---TNVLGSVKRDVGGGMRRTQLSSF-- 847
Query: 507 SKQSRGRGDSVQLKGKNTFAVPRNVR-PLGFPAIKPKTEEGEDLKPKSNDEFRKMFIKK 564
+PR ++ P + T G+ KP SN +FR + + K
Sbjct: 848 --------------------IPRVLQTPSTSKSSYANTSNGDSKKPLSNSDFRSLLLNK 886
>gi|300175323|emb|CBK20634.2| unnamed protein product [Blastocystis hominis]
Length = 385
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 159/368 (43%), Gaps = 61/368 (16%)
Query: 123 AFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGL 181
++ EYL +L + RRR++ E S +RE R D+L E K DG+
Sbjct: 14 VLGSYYEYLRFYLACLASYRRRVVLREEGAE----SALREYCGRCVDWLRELNKEWYDGI 69
Query: 182 LRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYK 241
L + + ++ + A +WE +LK W YI + + +AR++YK
Sbjct: 70 FELQKAVSQVYLTVLHEEELAYRIWEGILKFHSREFGYWSEYIQFDRAYNQSKQARALYK 129
Query: 242 RCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP- 300
R + E + AW FER +GTLE + +K + R EL + + ++E +++
Sbjct: 130 RAAAA--VSDNLEFVLCAWEEFERNFGTLETWSEFSRK-SRRFRELAMEKEEKERRAMET 186
Query: 301 -----------ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQ--KHAPQKPKKVHDK 347
E + E ++ KRKS + E+ PAKR+ + A QK K +
Sbjct: 187 VNVESKEDKEKEEEGEDEDEDEEKSAAKRKSP--MEREEIPAKRENVETATQKKKML--- 241
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
RE KQ + Q + T F++N++ A+ ED
Sbjct: 242 --------------REKKQDADVQHR-------------------TVFVNNLSFAASEED 268
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
++ F G + + I+ + GKSRG YV+F +E +A+ +N +M +K+ + +S
Sbjct: 269 VQERFQQYGEIVEVTIVRNNH-GKSRGFGYVEFSTEEAAESALVENGKMLKSRKMEVKKS 327
Query: 468 NPKQRKDS 475
P+ + +
Sbjct: 328 VPQNERKT 335
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 197/464 (42%), Gaps = 39/464 (8%)
Query: 23 FQQYMIYLKYEQSSGDPGR--VQLLYERAITDF--------PVSSD----LWLDYTQYLD 68
+ Y YL E+ P V+ LYERAI + P + D W Y +L
Sbjct: 259 LEGYAYYLGVERRRKTPDMFVVKPLYERAIAEADKRRLSGEPGAEDALRAFWTGYVDFLR 318
Query: 69 KTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEE---EISTVFEK--SLLCA 123
+ + R ++ P GEL R + LER+ SEE +IS V+EK S+
Sbjct: 319 SQSVDDEQLLLTFRRGMRSVPASGELLARYMRFLERALDSEEAAVQISVVYEKAQSVAPL 378
Query: 124 FSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLR 183
S E+ + L R G +R + +G DY + + + + K D LR
Sbjct: 379 LSDVEQLVAAVLARA-GFEKRSIEAGS--SGEDYESLLQILVDGISKVRKASKTGDPRLR 435
Query: 184 LYAYWAHLEQSMGKDMVSARGV--WERLLKISGAMLEAWQSYISMEIELDHINEARSIYK 241
L Y + + Q + D + A V WE K AW SY + I+ ++ R +++
Sbjct: 436 LEKYLSAVAQCLDVDDLHANAVVMWEDTAKHYKTSYLAWTSYTDVLIKEHMYDDVRKVFR 495
Query: 242 RCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPE 301
+K E I AW+ FE+ +GT+E+ ++++ V ++ R+++ K+
Sbjct: 496 DVSAKHLDW--PEAIWDAWVSFEQLHGTVEELENALAHVERAQTQVNARRAKEAEKAQLA 553
Query: 302 SADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHA-PQKPKKVHDKEKRQVQNLAEENE 360
+A + T ++ ++ E +P P H K K ++ AE ++
Sbjct: 554 AAQLIAETQASTVLAA-QAPVSVKTESAPETIAMDVDPSAATGSHSKRKADDEDSAESSK 612
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
R E+ ++QP K K + T F+ ++ E+LR F D G +
Sbjct: 613 -RPRMALTEKHTEEQPAK------LKRDRENSTVFVGDLPAGVEDEELRALFKDCGVIRE 665
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++I + +A V+F++ + + AA+ K+K+ GK++++
Sbjct: 666 VKITQ----LPNSLVATVEFLERDSVPAALTKDKKRVRGKEIAV 705
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR-ILHDKFTGKSRGLAYVDFID 442
RT +E +++ ++ T EDL F G V +R IL DK GKS+G A+++F
Sbjct: 794 RTDSDANEREIYIAGLSKLVTKEDLETLFKTYGNVKDVRMILDDK--GKSKGFAFIEFTT 851
Query: 443 DEHLAAAVAKNKQMFLGKKLSI----ARSNPKQR 472
+ AA+A N +++++ +R PK +
Sbjct: 852 EPEARAALAANNHELKKRRMAVTLADSRVKPKNK 885
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 210/482 (43%), Gaps = 60/482 (12%)
Query: 3 NARAHLEEQISRQ-DLSDSEKFQQYMIYLKYEQSSG----DPGRVQLLYERAITDFPVSS 57
N R+ E+++ + +S +E++ + YL++E S D LYER + F +
Sbjct: 299 NERSRYEDRLPKHGQVSLAEEWNAWAEYLEWETSRPKKKLDVDMACALYERCLLCFGEQA 358
Query: 58 DLWLDYTQY-LDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVF 116
+W +Y + L+K+L G V+ + RAT++CPW G LW + +++LER+ EE+S +
Sbjct: 359 RVWEEYVFFALEKSL--GPRVKALLKRATRHCPWSGTLWAQYIIALERAYRPFEEVSEIK 416
Query: 117 EKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSE 173
++ + EE L + + L+RR ++ + F A +SE
Sbjct: 417 HRATTTGMLDLGGLEEVLKVNIAWCGFLKRR---------AFEHDAGEDDFDMAEMGISE 467
Query: 174 QMKNTDG------LLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISME 227
+ T L R++ + ++ K + +AR +W+ L K G E W Y E
Sbjct: 468 AVTETGKKDPEYRLQRIHINFC----TLAKKIDAAREIWKELAKTHGNSYEYWLRYYHWE 523
Query: 228 IELDHINE--ARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLE 285
+ ++ A S K R T E I W ++G +ED V+ VT R
Sbjct: 524 LSHGPGDKDYAGSALKAALG-RNTLDWPEKILETWKNHVEDFGNVED----VEYVTVRYR 578
Query: 286 ELR---LFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPK 342
+L L R QE+ + A ++ +VK E ++ S S +KR++ +
Sbjct: 579 KLSKEILERRAQEA----QVAALQQQTVKDQQPEADTPQTDESARAS-SKRRRSVTEADD 633
Query: 343 KVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
K+ + + LA E Q P K +V R + + T + N+
Sbjct: 634 SQPKKKSKAAETLAPE-------QPAAHSPSP---KSSVAKRDR---ENTTVIVKNLPPN 680
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
+R+FF D G ++S++++ +K GK+ A V+F E + A KN ++ G +
Sbjct: 681 YPEVRVRQFFRDCGTINSLKLIVEK-DGKT-STATVEFESREDVLTAQTKNLKIVDGHSI 738
Query: 463 SI 464
+
Sbjct: 739 EV 740
>gi|119618222|gb|EAW97816.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_a [Homo sapiens]
Length = 575
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 170/395 (43%), Gaps = 36/395 (9%)
Query: 102 LERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR 161
+ER + IS FEK+L F +Y++++ +D LRRR+ F + L+ +R
Sbjct: 1 MERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSKELEE--LR 58
Query: 162 ETFQRASDYLSEQM-----KNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGA- 215
F RA +YL +++ ++ D + WA +E + +M AR +W+ ++ A
Sbjct: 59 AAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIEARLCNNMQKARELWDSIMTRGNAK 118
Query: 216 MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDH 275
W Y ++E R R + T E +C L ER G+LED+D
Sbjct: 119 YANMWLEYYNLERAHGDTQHCRKALHRAV--QCTSDYPEHVCEVLLTMERTEGSLEDWDI 176
Query: 276 SVQKVTPRL---EELRLFRSQQESKSL---PESADQKEHSVKKT----------GREKRK 319
+VQK RL E R+ +++E+ + E A+Q++ + + G EKR
Sbjct: 177 AVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEKRG 236
Query: 320 SDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPK 373
+D + E+ P+KR++ P + A + + + +++ K
Sbjct: 237 ADEDDEKEWGDDEEEQPSKRRRVENSIPAAGETQNVEVAAGPAGKCAAVDVEPPSKQKEK 296
Query: 374 KQPIKDAVPGRTKGFT-DECTAFLSNINLKATYED--LRRFFSDVGGVSSIRILHDKFTG 430
+K +P + D T F+SN+ D LR F G V IR + G
Sbjct: 297 AASLKRDMPKVLHDSSKDSITVFVSNLPYSMQEPDTKLRPLFEACGEVVQIRPIFSN-RG 355
Query: 431 KSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
RG YV+F +++ A+ +++ G+ + ++
Sbjct: 356 DFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 390
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 416 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 474
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 475 GMTIKENIIKVAISNPPQRK 494
>gi|409079019|gb|EKM79381.1| hypothetical protein AGABI1DRAFT_128535 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1026
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 192/445 (43%), Gaps = 51/445 (11%)
Query: 38 DPGRVQLLYERAITD---------FPVSSDLWLDYTQYLDKTLKVGNV-----VRDVYSR 83
DP +YERAI D F S L +T YLD ++ G +R + R
Sbjct: 259 DPFTASGIYERAIADAATKQFRGEFGASEALSSFWTGYLD-AMRSGEAGFAEELR-IVQR 316
Query: 84 ATKNCPWVGELWVRSLLSLER--------SRASEEEISTVFEKSLLCAF--STFEEYLDL 133
A ++ P GE+W R + LER + E + VF ++ E+ + +
Sbjct: 317 AVRSVPGSGEVWARYMRLLERFEDAPEDENEEGRETVHDVFTRAFQGNILQQNPEQLIPV 376
Query: 134 FLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQ 193
L R G RR + SG + +LI + + + + K+ D LRL A + +
Sbjct: 377 VLARA-GYERRKIESGRADEDSLATLI-SILESGIEIVLQATKSGDTRLRLEKALADVYE 434
Query: 194 SMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGS 253
+ + SA + + K + AW +Y + I+ +EARS++ K+
Sbjct: 435 RLAQIPESACDALKAVTKRQKSSYIAWTTYTEVLIKNQKYDEARSVFSDVCLKQLDW--P 492
Query: 254 EDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQ--KEHSVK 311
E I AW+ FE YG + + + +KV + F S++ +K + A Q E +
Sbjct: 493 EAIWEAWISFENLYGGVMEVEACSEKVL----RAQYFHSERRAKEAEKYAQQMPPETQAQ 548
Query: 312 KTGREK-RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEE 370
+E D N S A + ++VH K R V+ EE E+ + ++
Sbjct: 549 VVLQEAVNMIDGNQSLPGLDAASLMEVDTQ-EQVHVK-SRGVKRGLEEPTATESSKKLKP 606
Query: 371 QPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG 430
PK QP+K R + + CT F++++ AT +DL R F D GGV ++I+
Sbjct: 607 APKPQPLK-----RDR---ENCTVFVTDLPRNATNDDLFRLFKDCGGVREVKIM----PF 654
Query: 431 KSRGLAYVDFIDDEHLAAAVAKNKQ 455
+A V+F D E + AA+ K+K+
Sbjct: 655 PDILIATVEFHDRESVPAALTKDKK 679
>gi|449540429|gb|EMD31421.1| hypothetical protein CERSUDRAFT_119799 [Ceriporiopsis subvermispora
B]
Length = 1030
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 196/461 (42%), Gaps = 43/461 (9%)
Query: 23 FQQYMIYLKYEQ-SSGDPGRVQLLYERAITDF------------PVSSDLWLDYTQYLDK 69
+ Y YL E+ D ++ LYERAIT+ W Y +L
Sbjct: 251 LEGYAYYLATERRKKPDMFVLKTLYERAITEADKRRFFGELGSEEALRSFWTGYLDFLRI 310
Query: 70 TLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASE--EEISTVFEKSLLCA--FS 125
V+ Y RA K+ P GE+W R + LE S + E S ++K++ +
Sbjct: 311 QDADEGVLTVTYKRALKSVPTSGEVWARYIRFLESSNPKDVASETSAAYQKAMAVGPLVA 370
Query: 126 TFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLY 185
E+ + + L R +G +R SG G ++ I + F + + D LRL
Sbjct: 371 DVEQLIPVILAR-EGFEKRRFQSGNT-GEDGFTAILDIFTDGISRVRKASSAGDPRLRLE 428
Query: 186 AYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYS 245
+++ + + A +WE K + AW +Y + I+ +++AR +++
Sbjct: 429 KFYSAICLDLADQAEHALIMWEDTAKHYKSSYLAWTAYADVLIKQHMLDDARKLFRDICM 488
Query: 246 KRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQ 305
K E + AW+ FE+ YG++ED + ++ ++ + ++ L E+
Sbjct: 489 KNLDW--PEAMWEAWINFEQLYGSVEDIEDAMDRI-------ERANAHVHARRLKEAEKA 539
Query: 306 KEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETK 365
+++ ++ S + Q+P Q A ++ + + VQ + + +
Sbjct: 540 GYEAIQLAAEQQAAS---VPVVQAPVPIQTQALKEQASM---DVDAVQQGETSTKRKAEE 593
Query: 366 QTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI-- 423
+ + ++ KK I+ P + K + CT F++++ A DL F D G + IR+
Sbjct: 594 EILPDKSKKARIEQG-PLKLKRDRENCTVFVADLPSGAKEADLAALFKDCGEIREIRMTQ 652
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
L D +A V+F + + + AA+ K+K+ G+++++
Sbjct: 653 LPDAL------VATVEFQERDSVPAALTKDKKRIHGEEVAV 687
>gi|452844276|gb|EME46210.1| hypothetical protein DOTSEDRAFT_78563 [Dothistroma septosporum
NZE10]
Length = 1359
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 179/471 (38%), Gaps = 51/471 (10%)
Query: 22 KFQQYMIYLKYEQSSGDPGRVQL---LYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVR 78
+F +Y+ +Y P L LYERA+ FP +++ WLDY ++ N R
Sbjct: 504 QFDKYLKSERYAHKKPGPFDYDLRCALYERALLRFPTATEWWLDYVDFI--LTDFSNESR 561
Query: 79 D---VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLD 132
V RAT++CPW G+LW R +L + S EEI ++ L EE +
Sbjct: 562 SLLPVIERATRHCPWSGDLWARRILRADVEHKSREEIENTKHRATNAGLLDVGGMEELVK 621
Query: 133 LFLTRIDGLRRRILFSGEVEGVLD-----YSLIRETFQRASDYLSEQMKNTDGLLRLYAY 187
+ LRR E +D ++ E Q+A D L RL
Sbjct: 622 MLQQWCSYLRRHAFRPTSTEDDVDTAEVGITMALEDVQQAGTKTYGIGFQGDPLFRLEQV 681
Query: 188 WAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIEL---DHINEARSIYKRCY 244
+ + AR ++ +L+ G + W Y + E+ D IN+ R +
Sbjct: 682 QIKF-YTQARRFSDARNIYRQLVMQHGGSYDFWAKYYNWELWFWGHDRINDTRRME---- 736
Query: 245 SKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESK------S 298
T D A R T++ D +L E+ L+ QQ +
Sbjct: 737 ----TAENGPDFASAVCREALHQRTIDWPD--------KLLEMYLYHFQQHESGAKLQVA 784
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKR----QVQN 354
L + D K +E ++ + ++ +Q H +K KR QV
Sbjct: 785 LAAARDYANRLTVKRTKEAEETAALVASQQQELSAAVHQEAAANGGGEKRKRDDELQVNG 844
Query: 355 LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ T E+ K +P A + K + T + N+ + D+++FF D
Sbjct: 845 DGHKRSKTAETTTREDVTKTEPSASAS-AQVKRDRENNTITIRNLPVDVGEVDIKKFFRD 903
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
G SI IL D T A V+F +E + AA +N + G+++ I+
Sbjct: 904 CGHPPSINILRDNDTAS----ATVEFETEEDVLAAKTRNGKELNGREVRIS 950
>gi|430813480|emb|CCJ29191.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 597
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 197/475 (41%), Gaps = 55/475 (11%)
Query: 4 ARAHLEEQISRQDLSDSEKFQQYMIYLKYE--QSSGDPGRVQLLYERAITDFPVSSDLWL 61
AR E Q+S+ + + +++++ YL++E Q + + +L+ER + +P+S+++W
Sbjct: 40 ARDFHEIQLSQSNYA----YEEFIKYLEWELHQKPQEIELICILFERLLKCYPLSANIWE 95
Query: 62 DYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLL 121
DY Q++ + + + R+ KN PW G W + LE + +E+ + ++S+
Sbjct: 96 DYIQFMVEKSTYTKINEKFFQRSIKNYPWSGIPWKYYIYILEHNNYPLQELCAIKDRSIS 155
Query: 122 CA--FSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTD 179
F E++ + +RRI + Y++ Q + L K TD
Sbjct: 156 SGTLFHDINEFVKVMEAWCGYCKRRITQWNNNNEEVQYAITE--LQTSIKLLKNIFKTTD 213
Query: 180 GLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSI 239
RL + +G ++ AR +W+ +LKI + W Y E IN A +I
Sbjct: 214 NQKRLEKILISIFTKIG-NIDEARKIWKNILKIHTTETKYWLQYFIWERHYGEINNAINI 272
Query: 240 YKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSL 299
K K E + + F E GTLE + + + ++ ++ + ++
Sbjct: 273 LKNASLKHL--DFPELVFEIYRDFVIEEGTLELLEKAETIIHKGIKNIQRIK-KKVILIF 329
Query: 300 PESADQKE---HSVKKTGREKRKSDSNISY-EQSPAKRQKHAPQKPKK------VHDKEK 349
E D E S++ R +R + Y EQ+ A H KK + D K
Sbjct: 330 NEYGDVIEVRFPSLRYNSR-RRFCYVQMKYPEQALASLSLHGQMFEKKYKLIVNISDSSK 388
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLR 409
++ + A +EGRE +SNI+ ++T DL
Sbjct: 389 KEDRKEASSSEGREI------------------------------IISNISHESTENDLI 418
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G + S+R+++D+ + +G Y+ + E +A+ +KQ +S+
Sbjct: 419 DLFSKYGTLESVRLINDRNSKHHKGFCYIIYSTAEQALSALDADKQELHSNTISV 473
>gi|66802336|ref|XP_629950.1| hypothetical protein DDB_G0291836 [Dictyostelium discoideum AX4]
gi|60463348|gb|EAL61539.1| hypothetical protein DDB_G0291836 [Dictyostelium discoideum AX4]
Length = 949
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/501 (20%), Positives = 195/501 (38%), Gaps = 75/501 (14%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVR 78
D K+++Y+ + K +Q + P RV L+ER + F +W Y YL+K ++
Sbjct: 324 DQRKWKEYIEFEKQQQHNDKPMRVATLFERQLKSFSNHFSIWSFYLTYLEKFTNFKDLHL 383
Query: 79 DVYSRATKNCPWVGELWVRSLLSLERSRASEEE------ISTVFEKSLLCAFSTFEEYLD 132
V+SR+ ++ + GE W + LL LE ++ + I F++SL+ + +Y
Sbjct: 384 KVFSRSLRSIYYSGEHWSKYLLLLEERVHNDNDNDKRVKIEQEFQRSLVSGLKSEYDYQL 443
Query: 133 LFLTRIDGLRRRILFSGEVEGVL------------------------------------- 155
++ T ID R I+ +
Sbjct: 444 VYNTYIDYNWRSIIKKLNTDSNANSNGNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNSIS 503
Query: 156 --DYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKIS 213
D L++ F+ ++ +S N + Y Y A E D+ R + + +L I
Sbjct: 504 ENDKQLMKSLFETMNNQMSTIDVNNYTTVDRYMYIAQFEWRQFNDLSRYREIVDYVLSID 563
Query: 214 GAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDF 273
+ W YIS E+E R ++K+ S S I W FER YG + +
Sbjct: 564 PSQYWIWCQYISFEMEQKQFQSVRELFKKASSHIRFDDPSSRIWQDWFTFERGYGDINQY 623
Query: 274 DHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKR 333
+ V+ R ++ ++++ + L + Q++ ++ R K K D E+ +K+
Sbjct: 624 ----RAVSDRYSIIQNKYNKEQERYLQQQQQQQQKQQQQNKR-KEKDDGKNKDEKRISKK 678
Query: 334 QKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECT 393
QK NE + K +E K P + +
Sbjct: 679 QK-----------------------NENHKEKGDQDEFKKPLPPTSKKEKEKEKDLPKKL 715
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
L N++ DL + F G + S++++ DK GKS+G+ ++ + E A+ +
Sbjct: 716 IIL-NLSFDTAEPDLHKIFDKYGQIKSLKLVLDK-NGKSKGICFILYKSHESANKALEMD 773
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+Q+ + + + S +Q D
Sbjct: 774 QQIIKNRTICVQYSKDQQIND 794
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 392 CTAFLSNINLKATYEDLRRFF--SDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
T F++N++ E L +F + V G+ IR++ K+R AY+D ID E+L A
Sbjct: 823 LTVFINNLSPSVNKEKLEQFLRHNGVTGIKDIRVV-----LKARPFAYIDLIDKENLKKA 877
Query: 450 VAKNKQMFLGKKLSIARSNP 469
++ +K+ FL K +++ S P
Sbjct: 878 LSLDKKYFLSKLINVNLSKP 897
>gi|426195927|gb|EKV45856.1| hypothetical protein AGABI2DRAFT_186557 [Agaricus bisporus var.
bisporus H97]
Length = 980
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 195/452 (43%), Gaps = 57/452 (12%)
Query: 38 DPGRVQLLYERAITD---------FPVSSDLWLDYTQYLD--KTLKVGNVVR-DVYSRAT 85
DP +YERAI D F S L +T YLD ++ + G V + RA
Sbjct: 224 DPFTASGIYERAIADAATKQFRGEFGASEALSSFWTGYLDAMRSGEAGFVEELRIVQRAV 283
Query: 86 KNCPWVGELWVRSLLSLER-SRASEEE-------ISTVFEKSLLCAF--STFEEYLDLFL 135
++ P GE+W R + LER ASE+E + VF ++ E+ + + L
Sbjct: 284 RSVPGSGEVWARYMRLLERFEDASEDENEEGRETVHDVFTRAFQGNILQQNPEQLIPVVL 343
Query: 136 TRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
R G RR + SG + +LI + + + + K D LRL A + + +
Sbjct: 344 ARA-GSERRKIESGRADEDSLATLI-SILESGIEIVLQATKAGDTRLRLEKALADVYERL 401
Query: 196 GKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED 255
+ SA + + K + AW +Y + I+ +EARS++ K+ E
Sbjct: 402 AQMPESACDALQAVTKRQKSSYIAWTTYTEVLIKNQKYDEARSVFSDVCLKQLDW--PEA 459
Query: 256 ICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQ--KEHSVKKT 313
I AW+ FE YG + + + +KV + F S++ +K + A Q E +
Sbjct: 460 IWEAWISFENLYGGVMEVEACSEKVL----RAQYFHSERRAKEAEKYAQQMPPETQAQVV 515
Query: 314 GREK-RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVE--- 369
+E D N S A + ++VH K + + L EE E+ + ++
Sbjct: 516 LQEAVNMIDGNQSLPGLDAASLMEVDTQ-EQVHVKSRGAKRGLEEEPTATESNKKLKPGK 574
Query: 370 ----EQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL- 424
PK QP+K R + + CT F++++ AT +DL R F D GGV ++I+
Sbjct: 575 SCELSTPKPQPLK-----RDR---ENCTVFVTDLPRNATNDDLFRLFKDCGGVREVKIMP 626
Query: 425 -HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
D +A V+F D E + AA+ K+K+
Sbjct: 627 FPDIL------IATVEFHDRESVPAALTKDKK 652
>gi|328875818|gb|EGG24182.1| hypothetical protein DFA_06329 [Dictyostelium fasciculatum]
Length = 1027
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)
Query: 18 SDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGN-V 76
S EK+Q+Y+ + K +QS R+ +LYERA+ + DLW Y +L+ K +
Sbjct: 446 STLEKWQEYIGFEKKDQSKK-LNRIAILYERALQENYFVFDLWKQYLGFLEHDFKAPSAT 504
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEE---EISTVFEKSLLCAFSTFEEYLDL 133
+ V RA++N W G++W + LE+ ++ ++ VFE++L+ S EY +
Sbjct: 505 IFSVLERASRNVYWSGDIWSIYMSRLEKYSDKDDMILKVDQVFERALVAGLSGPTEYQHI 564
Query: 134 FLTRIDGL-RRRILFSGEVEGVLD---YSLIRETFQRASDYL-SEQMKNTDGLLRLYAYW 188
F TR D L R + G +LD ++ + FQ+ + L S M ++ L+ +
Sbjct: 565 FSTRFDILWRHQKKEGGAGAPLLDEEKVNMFEQHFQKEYEVLVSLGMDVSESLM----FR 620
Query: 189 AHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEI-ELDHINEARSIYKRCYSKR 247
A E + A ++ L + + YI +I + I+ AR IYK+
Sbjct: 621 AKFEAYQLDNSTLADQTFQLLYAGAPHLYHLVDEYIRFKITKQKDIDGAREIYKKAVK-- 678
Query: 248 FTGTGSEDICHAWLRFEREYGTLEDFDHSVQ 278
T + I WL FER YGTL+ DH+
Sbjct: 679 -TIAETSRIWQDWLNFERVYGTLQTSDHATH 708
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T F++N++ T E L+ F G VS +R++ K+R AYVD E + A+
Sbjct: 890 TVFINNLSSNVTKEKLQSFIESNGATVSDVRVI-----VKARPFAYVDLPTPEQVQNALK 944
Query: 452 KNKQMFLGKKLSIARSNP 469
N + FLG + +A S P
Sbjct: 945 LNNKYFLGNYMRVALSKP 962
>gi|195396823|ref|XP_002057028.1| GJ16573 [Drosophila virilis]
gi|194146795|gb|EDW62514.1| GJ16573 [Drosophila virilis]
Length = 792
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 190/466 (40%), Gaps = 66/466 (14%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGN------VVRDVY---------SRATK 86
V+L+YER + +P S LWLDY Y++K ++ N V D Y +R +
Sbjct: 271 VKLIYERCLAKYPTDSRLWLDYIAYMEKPIESANRALHHTSVNDGYLKCKPLDLINRVLQ 330
Query: 87 NCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFL-TRIDGLRRRI 145
P + L + L +E+ S+E++ T + L E Y+D+ + ++D L R+
Sbjct: 331 LKPTMA-LNHKYLELMEQHNLSQEQVETEITRHL----ERLEPYMDMNVELQLDYLAYRV 385
Query: 146 LFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ EV+ +R F++ D LS+ + D + WA +E + +
Sbjct: 386 RHT-EVDDEQQVKKLRAAFRQVWDRLSDLYGDQADTSYEVLQLWAQVEYAKLHSPDNGAS 444
Query: 205 VWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLR 262
+W +L G+ +++ W +Y ME E + + ++ ++ S I + R
Sbjct: 445 IWCEILNYPGSSVKSHLWLAYAQMESEYNSGRKMTTVLRQALSALSMTPDVHVIAELYRR 504
Query: 263 FEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREK--RKS 320
ER +GT + ++ E S+ E+ P S + + K+ G +K ++
Sbjct: 505 NERCFGTYQ----TIADCQAYCEAYMQVHSKVETYRQPSSTWRGQGDRKQMGNQKPVKRP 560
Query: 321 DSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDA 380
+ + +Q PA ++ P P K +PK+ K +
Sbjct: 561 SAPLPRKQVPAAKKIMPPGPPSK---------------------------EPKESNFKYS 593
Query: 381 VPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF 440
F+ N+ + T EDL F G + +R+++ + +G+AY++F
Sbjct: 594 PNLEVNKI------FIKNLYPRCTKEDLSDAFKCFGNIKDVRLVYKHGNQRFKGIAYIEF 647
Query: 441 IDDEHLAAAVAKNKQMFL-GKKLSIARSNPKQRKDSSGERAPTEQA 485
E AV + L G+ + +A SNP K ++G T A
Sbjct: 648 EKPEEAQNAVICGDGLCLGGQNIEVAISNPPP-KPAAGATTSTASA 692
>gi|412986026|emb|CCO17226.1| predicted protein [Bathycoccus prasinos]
Length = 785
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 195/489 (39%), Gaps = 110/489 (22%)
Query: 31 KYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPW 90
K E++ G VQ LYERA+ P LW++Y ++ + D+ RA + CP
Sbjct: 310 KREKNKGLNESVQSLYERALLKNPYVVCLWIEY------AMEFSSSKIDILHRALRACPS 363
Query: 91 VGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGE 150
EL + + S A + +I TV AF+ L L S +
Sbjct: 364 SFELLIEQI----DSSADDGDIQTVNVSVTTEAFANL-------------LENSSLKSFK 406
Query: 151 VEGVLDYSLIRETFQ-RASDYLSEQMKNTDGLL--------------RLYAYWAHLEQSM 195
V + + +R ++ + SD + + N +L +L YWA
Sbjct: 407 VANDVALAFLRAKWKDKKSDDTNNLLSNMHAILVAQFPNRIRIDPEMKLARYWAQRH--- 463
Query: 196 GKDMVSARGVWERLL----KISGAMLEAWQSYISMEIELDHINEAR-------SIYKRCY 244
+ VW+ L KI G LEA H+ AR + R Y
Sbjct: 464 ----ANPETVWKFFLVENEKIYGDYLEA------------HLQRARYFESSDPQLANRAY 507
Query: 245 SKRFTGTG------------------SEDICHAWLRFEREYGTLED-FDHSVQKVTPRLE 285
F+ + D+C +W F T ED F S +KV L
Sbjct: 508 EFAFSKRNKLSRAVKGRVKDDTKLLITRDLCTSWRSF---LETSEDSFPSSYEKVKSELH 564
Query: 286 ELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVH 345
+ E P ++ + +++ G+ RK ++ EQ +
Sbjct: 565 LIDF-----EKACEPPASAEDIKRMRREGQIARKRNN----EQEDGEFAAADDDAEDNAT 615
Query: 346 DKEKRQVQNLAEENEGRETKQTV---EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D EK + ++++ + E+P+++ IK+ P R D+ TAF+ N++
Sbjct: 616 DGEKNKRTKTRDDSKSHIPTSSFVPRSEKPREEVIKELYPDR-----DQQTAFVKNLDFS 670
Query: 403 ATYEDLRRFFSDVG--GVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK 460
T E+L +FF D+ G R++ D+ TG+S+G+AYVDF + +L AA+ ++ + G+
Sbjct: 671 ITEEELVKFF-DIKEEGTVKARVIKDRHTGRSKGIAYVDFESEHNLLAAIMRDGEALKGR 729
Query: 461 KLSIARSNP 469
LSIA+S P
Sbjct: 730 ALSIAKSRP 738
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 197/465 (42%), Gaps = 51/465 (10%)
Query: 23 FQQYMIYLKYEQ-SSGDPGRVQLLYERAITDFP------------VSSDLWLDYTQYLDK 69
+ Y Y+ E+ D VQ LYERAI + W Y +L
Sbjct: 251 LEGYAYYIAAERRKKPDLFVVQALYERAIAEADSRRWNGQAGAEETLRSFWAGYIDFLRI 310
Query: 70 TLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEE---ISTVFEK--SLLCAF 124
G + + RA ++ P GE+W R + LER SE+ +S +EK S+
Sbjct: 311 QDVDGELQMATFQRALRSAPGSGEVWARYIRFLERVADSEDADPGVSGAYEKTHSIFPLQ 370
Query: 125 STFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRL 184
S E+ + + L R G RR + +G+ G ++ + E + + D LR+
Sbjct: 371 SDVEQIVPVVLARA-GYERRQIEAGKT-GEDGFNKMVEVLMDGIARVRKASPAGDPRLRI 428
Query: 185 YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCY 244
Y++ + + + A +WE K AW SY + I+ +AR +++
Sbjct: 429 EKYFSAVCLKLAEHSEHALVLWEDASKHYKTSYLAWTSYTEVLIKQGLYEDARKVFRDIC 488
Query: 245 SKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESAD 304
K E I AW+ FE+ +GT+E+ + ++ ++ R+++ A+
Sbjct: 489 MKNL--DWPEAIWDAWINFEQLFGTVEEIEDCFDRIERANAQVAARRAKE--------AE 538
Query: 305 QKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE-----KRQVQNLAEEN 359
+ +H+ + E+ + +++ P A P V KR+ ++ +
Sbjct: 539 RADHAAMQLIAEQEANMVHVADVVPPPNAADSAGALPMDVDATSPAAGTKRKAEDEVALD 598
Query: 360 EGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVS 419
E ++ + +PK P+K R + + CT F++++ A +DL F D G +
Sbjct: 599 ENKKPRI----EPKVAPLK-----RDR---ENCTVFVADLPPAAGEDDLTLLFKDCGSIR 646
Query: 420 SIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
I++ + +A V+F++ + + AA+ K+K+ G+++++
Sbjct: 647 EIKMTQ----LPNSLVATVEFMERDSVPAALTKDKKRIGGEEVAV 687
>gi|402218951|gb|EJT99026.1| hypothetical protein DACRYDRAFT_24111 [Dacryopinax sp. DJM-731 SS1]
Length = 1056
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 203/476 (42%), Gaps = 63/476 (13%)
Query: 26 YMIYLKYEQS--SGDPGRVQLLYERAITDFP----------VSSD-----LWLDYTQYLD 68
Y YL++E++ + RV+ LYERAI D V++ W+D +++
Sbjct: 260 YAAYLRWEKNPHALKTERVRCLYERAIADAAGRRSAEGDEGVAAGKWEGVFWMDLIRFII 319
Query: 69 KTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFE 128
+ ++ +++RA ++ P GE+W + +LER + E+I V+ ++ +
Sbjct: 320 EHAGDEHLEMSLFARAIRSVPENGEVWAAYIRTLERHDLA-EQIPDVYAGAMDTNLLSAS 378
Query: 129 EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYW 188
+ +++ L L+R ++ S E I T + + ++ D LRL +W
Sbjct: 379 DVVEITLAYGAQLKRLLMSSDTPEPDEALHDILTTMLKTAVKKVRSLEGADPRLRLEKFW 438
Query: 189 AH----LEQSMGKDMVSARGVWERLLKISGAMLEAWQSYIS-MEIELDHINEARSIYKRC 243
+ L + + M +AR VW + AW Y + +L IN AR Y+
Sbjct: 439 SSIYVDLHEPSEEIMETARKVWGSAVTFYSNSYLAWSLYAQFIWQDLRDINRARRTYQEA 498
Query: 244 YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKV--------TPRLEELRLFRSQQE 295
+ R E I AW+ FE +GT ++ + ++ +V T R EE + ++
Sbjct: 499 -AVRSQLDWPEAIFDAWIDFEHRFGTADEVEAALIRVKHLSDKVTTKRQEEAETYMARTT 557
Query: 296 SKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNL 355
+ A Q SV + + S+ S K+KR+ ++
Sbjct: 558 HIQAEQQALQAVESVPQPVAGMDVDSAVDSHRDS-----------------KKKRKAED- 599
Query: 356 AEENEGRETK-----QTVEEQPKKQPIKDAV--PGRTKGFTDECTAFLSNINLKATYEDL 408
E EG +K + V EQP + + A P K + + +S + + AT + L
Sbjct: 600 --EGEGSASKRPRAAEQVVEQPAQVSMSPAPAEPAYLKRDRENSSVLVSGLPMDATEDAL 657
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
R+ F D G + I++ + G +A V+F+ + + AA+ K+K+ G ++++
Sbjct: 658 RQLFRDCGEIREIKL--SEVPGNH--VATVEFMTKDSVPAALTKDKKRISGAEIAV 709
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 193/468 (41%), Gaps = 73/468 (15%)
Query: 24 QQYMIYLKYEQSSG--DPGRVQLLYERAITD-----FPVSSD-------LWLDYTQYLDK 69
+ Y YL YE + D + +LYERAI+D F + + W Y L
Sbjct: 254 EAYDYYLTYEHRARKIDLPVISMLYERAISDTAKRRFQGTENAEAALRVFWSGYCDVLRT 313
Query: 70 TLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC---AFST 126
+ + + V RAT++ P G +W R + LE ++ ++IS+V + + AFST
Sbjct: 314 NSESVDRQQSVLLRATRSVPGSGVIWARYIRFLE---STNDDISSVLQATSEIYDKAFST 370
Query: 127 ------FEEYLDLFLTRIDGLRR----RILFSGEVEGVLDYSLIRETFQRASDYLSEQMK 176
EE + L R LRR LF EG+ E + AS
Sbjct: 371 GLIQKDVEEVIPLVRARASLLRRADVANTLFRVLEEGI-------EMVRSAS-------P 416
Query: 177 NTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEA 236
D RL Y A L + + + +WE K AW Y + + +E
Sbjct: 417 QGDPRFRLEKYLADLYVELIESHELSSKLWESTAKHYKTSYLAWVQYTESLTKEEKYDEV 476
Query: 237 RSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQES 296
R+++K +KR E + AW+ FE G L++ + +V +++ R+++
Sbjct: 477 RTVFKDIVTKRL--DWPEVVFDAWINFEHLNGNLDEIYDCLDRVGKAQQQVNSRRAKEAQ 534
Query: 297 KSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLA 356
K+ E+A T +E ++ E PA KR+V++ A
Sbjct: 535 KAAYEAAQ------ASTAQE-----ASAQNEAPPATSTSTMDVDEPVSDSTRKRKVEDSA 583
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVG 416
++G + + P K+ +++ T F++++ AT +DL F D G
Sbjct: 584 GRSDGNKKAKMGSTPPLKRDRENS------------TVFVADLPSGATEDDLTALFKDCG 631
Query: 417 GVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+ I+I SR +A ++F+D E + A + K+K+ G+++S+
Sbjct: 632 DIREIKITS---LANSR-VATIEFVDRESVPAGLTKDKKRINGQEISV 675
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDD 443
RT D+ +++ ++ +DL++ F G V IR+ D TG +G+A+V+F D+
Sbjct: 764 RTDAGADDREVYVAGLSKFVIRDDLKKLFKTFGPVKDIRVTKDD-TGLCKGVAFVEFEDE 822
Query: 444 EHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
A+ N +++++ S+ + R
Sbjct: 823 PSAQRALQANNHDVKNRRIAVTMSDSRVR 851
>gi|156389243|ref|XP_001634901.1| predicted protein [Nematostella vectensis]
gi|156221989|gb|EDO42838.1| predicted protein [Nematostella vectensis]
Length = 149
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 23 FQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVY- 81
+ Y YLKYE G+P R+ LYERA+ D + SDLW++YT YL + +
Sbjct: 1 LEAYKNYLKYEVQKGEPVRIVCLYERALKDNCLYSDLWMEYTTYLVSHMDKPTCWSWLEG 60
Query: 82 SRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGL 141
S T+NCPWV LW +L+L + +F+K+L C FS+ E+L L+ + +
Sbjct: 61 SFKTRNCPWVASLWQNYMLALVWHFYY---LVYIFDKALTCGFSSGVEFLQLWRCYCNHM 117
Query: 142 RRRIL-FSGEVEGVLDYSLIRETFQRASDYL 171
RRR+ ++ E + V ++ R + + A +Y+
Sbjct: 118 RRRVKEWTEESQEVKEW---RNSLKSAIEYM 145
>gi|258564845|ref|XP_002583167.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906868|gb|EEP81269.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1297
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 209/519 (40%), Gaps = 110/519 (21%)
Query: 2 CNARAHLEEQISR--QDLSDSEKFQQYMIYLKYEQSSGDPGRV---QL---LYERAITDF 53
C+AR E + R + + ++ Y YL +E S + QL LY+RA+ F
Sbjct: 427 CDAREPNELALQRAVESGDTAAEWSAYTQYLDFETSHKHKKPIFGFQLRTALYQRALLRF 486
Query: 54 PVSSDLWLDYT-QYLDKTLK--VGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEE 110
P ++LW DY + +++ V V + RA ++CPW G LW + LLS ER+ S +
Sbjct: 487 PTDANLWDDYVISVVSESMHHHVNEPVIPIIERAARHCPWSGSLWSQLLLSAERAGYSFQ 546
Query: 111 EISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR-----E 162
EIS + K+ L + E L + T LRR S + LD + + E
Sbjct: 547 EISDLKHKATRTGLLEAAGVAEVLKVHTTWCSYLRRLPFQSNSTDEDLDVAEVGMRSAIE 606
Query: 163 TFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQ 221
+ Q D + + N D L RL Y +L ++ D SAR ++ L+ G E W
Sbjct: 607 SVQAIGDRGDKAVPN-DPLFRLERIYIRYLSETGSWD--SARETFKGLVSRHGHSYEFWL 663
Query: 222 SYISMEIELDHINEARSIYKRCYSKRFTGTG-------------------------SEDI 256
+ + E+ C+SK G G E I
Sbjct: 664 MFYNWEL-------------LCWSKFTQGDGPRKAPSPHYATAVLKQALQKEDLDWPEKI 710
Query: 257 CHAWLRFEREYGTLEDFDHSV-------QKVTPRLEELRLFRSQQESKSLPESADQKEHS 309
++ +Y E+ ++ ++V R E+ L + Q+ ++ ++ + +H+
Sbjct: 711 MDTYIAHCEQYEDAEELQLAIVEIRQVAKRVAKRREKEALEVATQQQATVAQAVQEAQHN 770
Query: 310 VKK----TGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETK 365
V++ G+ KR+S A A +KPK AE +E + T+
Sbjct: 771 VEEAAAHAGKRKRES----------ADINGVASKKPK-------------AEVSEAKSTE 807
Query: 366 QTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILH 425
DAV K + T + N+ +R+FF D G ++S++++
Sbjct: 808 H------------DAVQSLPKRDRENSTVSVKNLPKDVPILKIRQFFRDCGKINSLKLIP 855
Query: 426 DKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
S A V+F E AA +++++ G+ +S+
Sbjct: 856 ADGNSAS---AIVEFDTKEDAEAAQTRDQKVLEGRTISV 891
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
R+ F + +SN++ KAT +DL F G V RI K G S+G +V F
Sbjct: 979 ARSGAFEEGREIHISNLDWKATEDDLVELFMAFGKVEVARI-PTKADGGSKGFGFVAFST 1037
Query: 443 DEHLAAAVAKNKQMFLGKKLSIARSN 468
E AA+A +++ F + L + S+
Sbjct: 1038 PETANAALAMDQKEFRSRPLRVKLSS 1063
>gi|336370109|gb|EGN98450.1| hypothetical protein SERLA73DRAFT_169409 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382879|gb|EGO24029.1| hypothetical protein SERLADRAFT_450319 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1027
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 185/447 (41%), Gaps = 56/447 (12%)
Query: 42 VQLLYERAITDFP------------VSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCP 89
V LYERAI + V W Y L D+ RA ++ P
Sbjct: 273 VTTLYERAIAEAAKRRFSGEIGAEQVLEMFWSGYCDALRIHDSNQQTELDIIQRAVRSVP 332
Query: 90 WVGELWVRSLLSLERSRASEEEIST------VFEKSLLCAFSTFEEY--LDLFLTRIDGL 141
GE+W R LER+ SEE I+ ++ +++ T + + + L L R G
Sbjct: 333 GCGEVWARYFRYLERTAESEENIANRPTEADIYTQAISTNLFTKDPHQAIPLILARA-GF 391
Query: 142 RRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVS 201
+R + SG+ + + LI+ + + + D RL + A L ++ +
Sbjct: 392 EKRKMESGKGDENIFVELIK-ILEDGVAMVRQASSTGDPGFRLEKFLAELYLNLADVPEN 450
Query: 202 ARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWL 261
A VW+ K + AW +Y + I+ D + AR+ ++ K E I AWL
Sbjct: 451 AITVWQNTAKHYKSNYSAWIAYTDVLIKTDRYDLARATFQDICMKNI--DWPEAIWEAWL 508
Query: 262 RFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESA----DQKEHSVKKTGREK 317
FE YG++E + + +V ++ + RS++ ++ ++A +Q+ +V
Sbjct: 509 AFEHLYGSVESIEACMDRVERAQYQVNMRRSKEAERAAYQAAQVSMEQQAATVPVIA--T 566
Query: 318 RKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPI 377
R D+ S+ P V K AE++ ET KK +
Sbjct: 567 RNIDTTESF------MDVDVPAAESGVKRK--------AEDDSPSETS-------KKAKL 605
Query: 378 KDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAY 437
+ ++P + + + CT F++ + AT +L+ F D G V ++I +A
Sbjct: 606 ETSLPPQKRD-RENCTVFVAELPAGATEGELKSLFKDCGEVREVKITQ----LPESLVAT 660
Query: 438 VDFIDDEHLAAAVAKNKQMFLGKKLSI 464
V+F + + + A+ K+K+ G+++++
Sbjct: 661 VEFAERDSVPGALTKDKKRIQGEEIAV 687
>gi|146166103|ref|XP_001015927.2| hypothetical protein TTHERM_00267920 [Tetrahymena thermophila]
gi|146145323|gb|EAR95682.2| hypothetical protein TTHERM_00267920 [Tetrahymena thermophila
SB210]
Length = 2074
Score = 79.3 bits (194), Expect = 5e-12, Method: Composition-based stats.
Identities = 89/446 (19%), Positives = 177/446 (39%), Gaps = 51/446 (11%)
Query: 58 DLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFE 117
+ W Y QYL + + + RATKNC +L L LE+ +A +EI +
Sbjct: 286 NFWKLYIQYLKDIETPASHLSKIMCRATKNCKADLDLHTEYLRVLEKRQAPFDEIENELD 345
Query: 118 KSLLC----------AFSTFEEYLDLFLTRIDGLRR--RILFSGEVEGVLDYSLIRETFQ 165
+ L +++F Y L +D + + + S++R+ ++
Sbjct: 346 RLLYTYKNANDDRYILYTSFLSYTVRNLKTVDNPYEVDSSTLNDDYINPSNISIMRKAYE 405
Query: 166 RASDYLSEQMK------------NTDGLLRLYA-----YWAHLEQSMGKDMVSARGVWER 208
+A Y ++ + N+D L +Y A +E + +D + E+
Sbjct: 406 KAVKYFTKLKEELESEEDEQTEENSDSTLTVYINEIILKHAEIECYIIRDKEQLNQIMEK 465
Query: 209 LLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYG 268
+K +G + W+ Y E L + R I KR + + I + FE++YG
Sbjct: 466 FVKENGENISCWKKYYEFERVLGKTSTMRGILKR--ACMYVKDEPLAIHQILVDFEQDYG 523
Query: 269 TLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQ 328
++ + ++QK + +E+ + + + E ++ + + S + E
Sbjct: 524 NVDLLEKAIQKQIQKYQEINEKEAAAAQEQEQGQTETNEENIIIQVEQVAQDQSTVHEEH 583
Query: 329 SPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGF 388
+Q+ K K HD + + N + + ++T +Q +P
Sbjct: 584 QNNHQQQKTSNKRKPSHDITEEEDIN---KKVKLDQEKTAIDQDGTKP------------ 628
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID-DEHLA 447
T F+ N+ T + + F + + +IRI+ K G ++G AY+DF +E
Sbjct: 629 ----TVFIKNLPSNCTEASISQLFENRDHIKAIRIVKSKHGGMNKGFAYIDFSSMEEANN 684
Query: 448 AAVAKNKQMFLGKKLSIARSNPKQRK 473
A + N + G+KL +A S P +++
Sbjct: 685 ACLMMNDALVEGQKLYVAISAPPKKQ 710
>gi|302688437|ref|XP_003033898.1| hypothetical protein SCHCODRAFT_256539 [Schizophyllum commune H4-8]
gi|300107593|gb|EFI98995.1| hypothetical protein SCHCODRAFT_256539 [Schizophyllum commune H4-8]
Length = 1332
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 185/443 (41%), Gaps = 57/443 (12%)
Query: 34 QSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGE 93
+++G+PG E A+ F W+ Y L + Y RA ++ P GE
Sbjct: 289 RTTGEPGS-----EEALRSF------WVAYLDALRIQGAPEEIQHRTYKRAARSIPGSGE 337
Query: 94 LWVRSLLSLERSR--ASEEE------ISTVFEKSLLCAF--STFEEYLDLFLTRIDGLRR 143
+W R + LER++ SEEE ++ +++++ + E+ + + L R +R
Sbjct: 338 MWARYMRFLERTKDEVSEEEEPNRETVAAIYDRAFATGLLQTDAEQIVPVVLARAGYDKR 397
Query: 144 RILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSAR 203
+ + + + + ET + + D LRL + A + + A
Sbjct: 398 S---AEDADAIASLIAVVET---GIGMVRAASRAGDPRLRLEKFLADVYTEVASLPAGAI 451
Query: 204 GVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRF 263
VW+ K W +Y I+ I+ AR ++ + K E + AWL F
Sbjct: 452 EVWQAAAKAHKISYTVWLAYTDCLIKQGQIDAARHVFNDVHGKHLDW--PEAVWDAWLNF 509
Query: 264 EREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSN 323
E +G++++ + + K+ ++ R+++ A++ + + + +N
Sbjct: 510 EHIHGSVDEIEDCLDKIERARYQVNARRAKE--------AERAAYQYAAEQQANQAQVAN 561
Query: 324 ISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGR--ETKQTVEEQPKKQPIKDAV 381
+ + A APQ + R + AE++ G ++++ + +PK P+K
Sbjct: 562 VPVPNADAPMDVDAPQPAGE------RGTKRAAEDDAGPGDQSQKRAKVEPKGPPLK--- 612
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
R + + CT F S + +DLR F D G + I+I H + +A V+FI
Sbjct: 613 --RDR---ENCTVFASELPPNVQEDDLRGLFKDCGSIREIKITH----LEKAVVATVEFI 663
Query: 442 DDEHLAAAVAKNKQMFLGKKLSI 464
+ + A+ K+K+ G+++++
Sbjct: 664 QRDSVPQALTKDKKRIQGEEIAV 686
>gi|325188438|emb|CCA22974.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 181/483 (37%), Gaps = 106/483 (21%)
Query: 37 GDPGR--VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV-VRDVYSRATKNCPWVGE 93
GD G +Q YERAI D +SS +W+ Y QYL K + R+ +N
Sbjct: 310 GDLGLKVMQAYYERAIKDICMSSSIWIRYIQYLKKHNSATLCQLSSTCERSVRNVFMDSS 369
Query: 94 LWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLD------LFLTRIDGLRRRILF 147
LW + +L LE+++ + + LL S +D + L D RRR
Sbjct: 370 LWCQCILVLEQNQ-EYDRLDQFLNDQLLERQSPQNPVMDEHHAISVLLMYCDTARRRCFD 428
Query: 148 SGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGL-LRLYAYWAH---LEQSMGKDMVSAR 203
S +G +S ++ F ++ + + + L +Y H L + G+ +VS
Sbjct: 429 SNNRQG---HSYMQNAFTKSIQFFNHSYPTSSVYHFHLQSYRLHCKFLVEEQGRTLVSFP 485
Query: 204 GV---------WERLLKISGAMLEAWQSYISMEIELDHINEA------------------ 236
WE +L + W Y + HI +
Sbjct: 486 SPRDTSAWEEGWEEILASRPSQAAVWIQYYQSSLIRRHIRSSQADPNNTKINPTIVVYPS 545
Query: 237 ----RSIYKRCYSKRFTGTGSED--ICHAWLRFEREYGTLEDF----DHSVQKVTPRLEE 286
+++ KRC+ + I AWL FERE+G L F D + +T +L+
Sbjct: 546 LLGIQAVRKRCFERAVESVQDTPLLIFEAWLTFEREHGDLSSFLRVRDLYTEALTQQLQT 605
Query: 287 LRLFRSQQESKS--LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKV 344
+ ++ E K +P ++H K+ ++RK + ++ + + P P K
Sbjct: 606 AEVPQANSEEKPHEIPSRKRSRDHH-SKSSLDRRK----LKKAKAESSKAAITPNDPNK- 659
Query: 345 HDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKAT 404
H + R T F+SNI+ + T
Sbjct: 660 HSADPRH-----------------------------------------TLFVSNIDKEVT 678
Query: 405 YEDLRRFFSDVG-GVSSIRILHDKFTG--KSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
+ LR FSD + S+R++ K KSRG AYV F+D+E A+ + + GK
Sbjct: 679 EDQLRSIFSDSAPNLQSVRLVAKKRAHGLKSRGFAYVSFLDEESCQTALQLDGMVVKGKP 738
Query: 462 LSI 464
+ I
Sbjct: 739 VRI 741
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 198/465 (42%), Gaps = 59/465 (12%)
Query: 29 YLKYEQSSGDPGRVQL--LYERAITDFPV---------SSDLWLDYTQYLDKTLKVGNVV 77
Y+ +E+ + P + +YERAIT+ L + YLD +++ +V
Sbjct: 300 YISFERRARYPDLLSTRGIYERAITEAASRRHKGEQGSEQALRAFWAGYLD-AMRIQDVG 358
Query: 78 RDV----YSRATKNCPWVGELWVRSLLSLERSRASE-----EEISTVFEKSLLC-AFSTF 127
DV Y+RA ++ P GE+W R + LER+ S E + + +++ A S
Sbjct: 359 IDVEQVLYTRALRSAPASGEVWSRYIRFLERAAKSMDTEGLESPADAYSRAISSGAMSDV 418
Query: 128 EEYLDLFLTRIDGLRRRILFSGEVEGVLDY----SLIRETFQRASDYLSEQMKNTDGLLR 183
E + + L +RRI E + DY +LI + A D + + K D R
Sbjct: 419 ENIISVTLAYTGWEKRRI----EAQDPPDYDDLPNLIAAA-ESAIDLVLKADKAGDPKFR 473
Query: 184 LYAYWAHL-EQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKR 242
L + A L + + +D V VW+ K W +Y I+ + EARS++
Sbjct: 474 LEKFLAGLGDVGLVEDAVK---VWKAASKKHKGNYAVWLNYTETLIKHKNFEEARSVFTE 530
Query: 243 CYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPES 302
++KR E + AWL FE+ +G++E D + K+ +L +R+++ K+
Sbjct: 531 VHTKRMDW--PEAVWEAWLSFEQLHGSVETIDSCLDKIEKAQAQLNFYRAREMEKA---- 584
Query: 303 ADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGR 362
+ +D A+R P P + V A +
Sbjct: 585 --YQNQQQYAAAARASATDPATDAMNVDAQR----PSAP----EPSAMDVDTPAISSLDS 634
Query: 363 ETKQTVEEQPKKQPIKDA----VPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
+ ++T E++P + K A P K + T F++++ + T ++L+ F D G +
Sbjct: 635 KKRRTDEDEPSGETSKRARFETNPPALKRDRENTTVFVADLPEQVTEDELKSLFKDCGSI 694
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
++I K +A V+F + + + AA+ K+K+ G+++S
Sbjct: 695 REVKIT--KLPNAV--VALVEFFERDSVPAALTKDKKRLQGQEIS 735
>gi|315047680|ref|XP_003173215.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum
CBS 118893]
gi|311343601|gb|EFR02804.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma gypseum
CBS 118893]
Length = 1329
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 200/474 (42%), Gaps = 76/474 (16%)
Query: 39 PGRVQL---LYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVG 92
P R++L LY+RA+ FP + LW DY +L D+++ +G V RAT++CPW G
Sbjct: 470 PLRLELITSLYQRAVLRFPTDATLWEDYVMFLIDESMDGPMGISPIPVIERATRHCPWSG 529
Query: 93 ELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSG 149
LW + +S ER+ S EI + K S L + E L + T LRR L
Sbjct: 530 ALWSQLFVSAERAGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPE 589
Query: 150 EVEGVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ LD + + E+ Q D + + N D L HLE+ + +SARG
Sbjct: 590 STDEDLDVAEVGIRSAIESVQELGDKTDKAVPN-DPLF-------HLERIYIR-YLSARG 640
Query: 205 VWE-------RLLKISGAMLEAWQSYISMEI-----------------ELDHINEARSIY 240
W+ L+ G E W +Y + E+ + + + A ++
Sbjct: 641 SWDSAREEFKHLIPRHGHSFEFWLAYYTWELLSWSKFMPSDSSASASRRMPNPSYATAVL 700
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
K+ +R E I A++ Y ED D S + + ++ +++ ++L
Sbjct: 701 KQAL-QRTDLDWPEKIMDAYISHCEHY---EDADESQLAIIDVRKAMKALTKRRQREAL- 755
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAP----QKPKKV-----HDKEKRQ 351
Q++ ++ + + +N Y Q A+ +HAP P+ V H E +
Sbjct: 756 ---QQQQQQQQQQQYHQHQQVANHQYHQ--AQYAQHAPAAVGAHPEPVEQQHPHPDEAQS 810
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDA-VPGRTKGFTDECTAFLSNINLKATYEDLRR 410
E E E TV ++ K I P R + + + + N+ +R+
Sbjct: 811 AGKRKREGEP-EMNGTVSKKAKGGTIPSVEAPTRDR---EHASVIIKNLPKDIPQVKIRQ 866
Query: 411 FFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FF D G ++S+++L G S G A ++F E AA KN+++ G K+++
Sbjct: 867 FFRDCGKLNSLQML----PGDS-GSALLEFDTHEDALAAGTKNQRLLEGSKVTV 915
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
R+ + + ++ NI K T DL F+ G V S+RI K G++RG A+V F
Sbjct: 1003 ARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRIP-TKVNGETRGFAFVSFAT 1061
Query: 443 DEHLAAAVAKNKQMFLGKKLSI 464
+ AA+A N++ F G++L++
Sbjct: 1062 KDQSTAALALNEKTFKGRELNV 1083
>gi|2582672|emb|CAA75535.1| RNA binding protein [Drosophila melanogaster]
Length = 943
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 208/517 (40%), Gaps = 72/517 (13%)
Query: 5 RAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYT 64
+ HL+E D S+ K Y + ++ ++ER++ FP+ LWL Y
Sbjct: 321 KQHLDETTRGWDWSEQHKAHVYDVETLSLDDDLKNAVIRFIFERSVAKFPIVDVLWLSYI 380
Query: 65 QYLD------------------------KTLKVG---NVVRDVYSRATKNCPWVGELWVR 97
+++ K L G N D+ +R ++ P V +L R
Sbjct: 381 EFIQFEGVTVPENEDENEVTAEMVAKRAKRLGKGFLRNTELDLANRGVRSHPSV-QLNHR 439
Query: 98 SLLSLERS----RASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEG 153
L +ERS +EEI + ++ + T E +LD RI R S E +
Sbjct: 440 FLDLMERSDFELAEVDEEIRLILQRIVTDMDMTVELHLDYLAYRI----RNTNASDEQQV 495
Query: 154 VLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKIS 213
+ ++ + +Q +L+L WA +E + + R +W +++
Sbjct: 496 ASLGAAFNHAWEELTVLYGDQADTRYEVLQL---WAQVEYTQLGSPDNGREIWRQIMGYP 552
Query: 214 GAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLE 271
G+ + W ++ ME E + + R + ++ S+ G + + R+ER YGT E
Sbjct: 553 GSSIRGLLWLNFAQMESEYNGGHGTRDVLRKALSQPVLENGLM-VQEFFRRYERCYGTYE 611
Query: 272 D------FDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNIS 325
D V+ V PR K +SA ++ +K ++++ + ++
Sbjct: 612 SIAACQALDLPVEYVKPR----------SRIKPNSQSAYPRQQKLKPRQQQQQTNREPLN 661
Query: 326 YEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT 385
EQ +RQ H Q+ ++ ++K ++ E G T P K +
Sbjct: 662 REQR--RRQAHEQQQQQQQQQQQKHGIKKSRTEPSGGATSP-----PSKVKGPANAEAKE 714
Query: 386 KGF-----TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF 440
F + F+ N++ + E+L FS G + +R++H K + +G+AYV+F
Sbjct: 715 SNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVH-KLNKQFKGIAYVEF 773
Query: 441 IDDEHLAAAVA-KNKQMFLGKKLSIARSNPKQRKDSS 476
AVA ++ +F G +S+A SNP R S+
Sbjct: 774 EKPGEAQRAVAGRDGCLFKGMNISVAISNPPPRGTSA 810
>gi|407921246|gb|EKG14398.1| hypothetical protein MPH_08387 [Macrophomina phaseolina MS6]
Length = 1116
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 182/450 (40%), Gaps = 52/450 (11%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLS 101
+ LYERA F + + +W DY Q L + G V V R T++CPW GELW + LL+
Sbjct: 291 INALYERATLRFSIDATIWQDYVQLLMEHADGGVDVLAVLERGTRHCPWSGELWSQRLLA 350
Query: 102 LERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYS 158
LE S +E+ +V ++ L EE L +++ LRR+ + E +D +
Sbjct: 351 LEAEGRSFDEMESVKHRATETGLLDVGGLEELLKVYVAWCGFLRRKAFDARSSEDDIDIA 410
Query: 159 --LIRETFQRASDY----LSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKI 212
IR + + +Q K D RL G ++ +AR W+ L+
Sbjct: 411 EVGIRSALEHVEEIGEKRYGKQFKG-DPQYRLERINIKFITQSG-NIQAARDCWKALIPA 468
Query: 213 SGAMLEAWQSYISMEI----------------ELDHINEARSIYKRCYSKRFTGTGSEDI 256
+ W Y E+ L+ EA +I ++ + T E +
Sbjct: 469 QENSYDFWYRYYIWEMVLWSKWCMRDKENAGQTLETPREATNILRQGLKRVMTMDWPEQL 528
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGRE 316
++ ++ ++ ++ +++ + E+ R ++ +++ Q + + T
Sbjct: 529 IDMFIHHCEQHESVHEYRYAIFEAKKARAEVAARRQKEAAEAAAAYQQQMAGAAEAT--- 585
Query: 317 KRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQT-VEEQPKKQ 375
+YE + A + K KR V AEEN ++++Q +P +
Sbjct: 586 ------PATYEDASA-------------NGKRKRGVDAAAEENATKKSRQGEASTKPMDE 626
Query: 376 PIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGL 435
+ K + T + NI +T +R+FF D G ++SI ++ D S
Sbjct: 627 EASSPATAQVKRDREHTTVIVKNIPASSTQTRVRQFFRDCGTINSIILVPDG--NGSTQT 684
Query: 436 AYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
A V+F +A+ ++ + G+ + I+
Sbjct: 685 ATVEFETPGDAESALTRDGKSLDGESVRIS 714
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 206/478 (43%), Gaps = 66/478 (13%)
Query: 20 SEKFQQYMIYLKYEQSS--GDPGRVQLLYERAITDFP---------------------VS 56
++ Y+ Y+ YE+ + DP + +YERA+ +
Sbjct: 248 ADPLPAYLSYVTYERRAKVPDPFVAKGVYERALAELAKRHMSLSEVTQSSSSKMETEEAL 307
Query: 57 SDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTV- 115
LW Y Y+ + V RA ++ P GE+W R + LER +EEI V
Sbjct: 308 RALWNGYADYMRTSAFDEVEEMQVLRRAIRSVPGSGEVWARYIRFLERKLDQDEEIEEVE 367
Query: 116 -----FEKSLLCAFSTFE--EYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRAS 168
++++ + + + + L L+R G +R L + + +G SL++ +
Sbjct: 368 KVTDAYDRAFATGLFSKDPAQIIPLVLSRA-GFEKRQLEAQKSDG---DSLLK-VVEDGI 422
Query: 169 DYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEI 228
+ + D L RL + +HL S+ + +A +W+ K + AW +Y + I
Sbjct: 423 ALVRKATPEGDPLFRLEKFLSHLFISL-ELPDNAIALWQATAKHYKSSYLAWTTYTDILI 481
Query: 229 ELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELR 288
+ D + RS ++ +K E I AWL FE +G+L++ ++++++V
Sbjct: 482 KYDRHDVVRSAFQDVSTKNIDW--PEVIWEAWLSFEHSFGSLDEIENAIERVDKA----- 534
Query: 289 LFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKE 348
R+ ++ E+ + + +++ + + +PA Q P +
Sbjct: 535 --RTIVNARRAKEAEQAAAQYAARYPAARPEAEQAMDVD-TPA--QVEEPVVAASTNSGT 589
Query: 349 KRQVQNLAEENEGRETKQT-VEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V++ +E+ G +K+ VE +P P+K R + + C F+S++ L D
Sbjct: 590 KRKVEDASEQPVGESSKKARVEAKPA--PLK-----RDR---ENCAVFISSLPLGTDESD 639
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGL-AYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
L F D G + I+I T + L A V+F + + AA+ K+K+ G+++++
Sbjct: 640 LNALFKDCGEIRGIKI-----TELPQALVATVEFGTRDSVPAALTKDKKRIRGEEIAV 692
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDD 443
RT +E +++ ++ T EDL+ F G V+ +R++ DK G+S+G A+V+F +
Sbjct: 799 RTDADANEKEVYVAGLSKYTTKEDLKGVFKTYGTVNDVRLVTDK-NGQSKGFAFVEFESE 857
Query: 444 EHLAAAVAKNKQMFLGKKLSI--ARSNPKQRKDSSGERAPTEQAQSHQQT 491
AA++ N +++++ A S K R S + QA+ Q++
Sbjct: 858 TSAQAALSANNYELRSRRIAVTLADSRVKPRYQDSKDTGLGRQAELQQRS 907
>gi|308803026|ref|XP_003078826.1| RNA-binding protein SART3 (RRM superfamily) (ISS) [Ostreococcus
tauri]
gi|116057279|emb|CAL51706.1| RNA-binding protein SART3 (RRM superfamily) (ISS) [Ostreococcus
tauri]
Length = 755
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D CTAF+ N++ T L FF+ GG S RI+ DK TG+SRG+AYVDF ++ L AA
Sbjct: 610 DACTAFVKNLSRDVTESQLVGFFNGHGGTVSARIVKDKTTGRSRGIAYVDFTEEAALNAA 669
Query: 450 VAKNKQMFLGKKLSIARSNP 469
+ ++ + G+ L IA+S P
Sbjct: 670 IMRSGEELEGRALDIAKSRP 689
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 35 SSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVR-DVYSRATKNCPWVGE 93
SSGD RV+ +YERA+ F +LW+ Y Y + + +V D RA ++CP
Sbjct: 267 SSGDSDRVKHMYERALGHFSYVGELWVQYGAYCFSSARKSHVAPCDFLRRALRHCPSSLA 326
Query: 94 LW 95
LW
Sbjct: 327 LW 328
>gi|302496478|ref|XP_003010240.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
gi|291173782|gb|EFE29600.1| pre-mRNA splicing factor (Prp24), putative [Arthroderma benhamiae CBS
112371]
Length = 1598
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 202/472 (42%), Gaps = 66/472 (13%)
Query: 39 PGRVQL---LYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVG 92
P R++L LY+RA+ FP + LW DY +L D+++ +G V RAT++CPW G
Sbjct: 722 PLRLELITSLYQRAVLRFPTDATLWEDYVMFLIDESMDGPMGVSPIPVIERATRHCPWSG 781
Query: 93 ELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSG 149
LW + +S ER+ S EI + K S L + E L + T LRR L
Sbjct: 782 ALWSQLFISAERAGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPE 841
Query: 150 EVEGVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ LD + + E+ Q D + + N D L HLE+ + +SARG
Sbjct: 842 STDEDLDVAEVGIRSAIESVQELGDKTDKAVPN-DPLF-------HLERIYIR-YLSARG 892
Query: 205 VWE-------RLLKISGAMLEAWQSYISMEI-----------------ELDHINEARSIY 240
W+ L+ G E W +Y + E+ + + + A ++
Sbjct: 893 SWDSAREEFKHLIPRHGHSFEFWLAYYTWELLSWSKFMPCDSSASASRRMPNPSYATAVL 952
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
K+ +R E I A++ Y ED D S + + ++ +++ ++L
Sbjct: 953 KQAL-QRTDLDWPEKIMDAYISHCEHY---EDADESQLAIIDVRKAMKALTKRRQREALQ 1008
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAP----QKPKKV----HDKEKRQV 352
+ Q++ ++ ++ ++ ++ A+ +HAP P V H ++ Q+
Sbjct: 1009 QQQQQQQQQQQQQYHHHQQLANHQYHQVQHAQHAQHAPVSVGPHPDSVEQQYHYPDETQL 1068
Query: 353 QNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFF 412
+ E TV ++ K I +V R + + + + N+ +R+FF
Sbjct: 1069 AGKRKREGEPEVNGTVSKRAKGGAIP-SVETRARD-REHASVIIKNLPKDIPQVKIRQFF 1126
Query: 413 SDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
D G ++S+++L G S G A ++F E AA KN+++ G ++++
Sbjct: 1127 RDCGKLNSLQML----PGDS-GSALLEFDTHEDALAAGTKNQKVLEGNQVTV 1173
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 15/149 (10%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI-----------DD 443
++ NI K T DL F+ G V S+RI K G++RG +V F D
Sbjct: 1273 YVCNIPYKTTEGDLVELFTAYGDVESVRI-PTKVNGETRGFGFVTFATKLDRAVILTSDK 1331
Query: 444 EHLAAAVAKNKQMFLGKKLSIARS-NPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKES 502
+ AA+A N++ F G++L++ S N ++ + + +E ++ Q T++
Sbjct: 1332 DQSTAALAMNEKTFKGRELNVRLSTNTGAKRHQNTIVSRSESPATNAQRNGTSTASPPPG 1391
Query: 503 SIETSKQSRGRGDSVQLKGKNTFAVPRNV 531
S+ QS+G+GD L+ +P V
Sbjct: 1392 SLPDG-QSKGKGDR-HLRTLGLMNIPDTV 1418
>gi|393227010|gb|EJD34711.1| hypothetical protein AURDEDRAFT_109252 [Auricularia delicata
TFB-10046 SS5]
Length = 1014
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 182/419 (43%), Gaps = 49/419 (11%)
Query: 59 LWLDYTQYLDKTLKVGNVVRDVYS--RATKNCPWVGELWVRSLLSLERSRASE---EEIS 113
WL Y +L +T K +++ + RAT++ P G+ W L +LER E E +
Sbjct: 274 FWLSYAGFL-RTAKTPEPRKELATLYRATRSVPASGDAWAAYLRALERHADVEGPKESVE 332
Query: 114 TVFEKSLLCAF--STFEEYLDLFLTRIDGLRRRILFS-----GEVEGVLDYSLIRETFQR 166
F ++L + E+ + L R D RR + GE G ++ + +T +
Sbjct: 333 EAFGRALGMGVVQDSVEDIVPLVQARADFERRSASSAQDEENGEEGGPVER--LVQTLEG 390
Query: 167 ASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISM 226
+ + D LRL + + + M + A +WE K AW +Y+ +
Sbjct: 391 GIELVRNAGPAGDPRLRLEKHLGAIYEDM-DETERALEMWEATAKFFKTSYLAWDAYLRL 449
Query: 227 EIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEE 286
+ D +AR++++ +K E + AWL FE +G++ED D V +VT E+
Sbjct: 450 LTKSDP-PKARTVFRDVSAKNLDW--PEMLWEAWLGFEHIHGSVEDVDDCVARVTVLNEK 506
Query: 287 LRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHD 346
L R+ KE +T ++ + + E A + PQ V
Sbjct: 507 LTAKRA-------------KEAEAYQTAYAQQAAAAAPVAEAQDAMQVDEPPQDGGAVSK 553
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYE 406
K K + + + +EG E K+ I D+V R + + T +++++ A+
Sbjct: 554 KRKAEDDDTSTRDEG--------EANKRVKIDDSVLKRDR---ENSTVLVADLSADASEA 602
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRG-LAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
L++FF D G + I K T + G +A V+F+ E + AA+ ++K+ G+++++
Sbjct: 603 ALKKFFKDCGAIREI-----KLTQLASGPVASVEFMSRESVPAALTRDKKRIDGQEVAV 656
>gi|119497981|ref|XP_001265748.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri
NRRL 181]
gi|119413912|gb|EAW23851.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri
NRRL 181]
Length = 1281
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 109/248 (43%), Gaps = 26/248 (10%)
Query: 3 NARAHLEEQISRQDLSDSEKF----QQYMIYLKYEQSSGDPGR------VQLLYERAITD 52
NAR HLE I ++ D+ +F Y Y+++E S R V +Y+RA+
Sbjct: 418 NAREHLE--IKLRNAVDAGEFGLEWAAYSEYIEWEVSRHRRKRQSNFDLVNAIYQRAVLR 475
Query: 53 FPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRSLLSLERSRASE 109
FP S+LW DY +L GN S RAT++CP G LW + LLS ER S
Sbjct: 476 FPTDSNLWEDYVMFLIDQNTHGNARATTISTLERATRHCPCSGTLWSQYLLSSEREGQSF 535
Query: 110 EEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR----- 161
++I+ + K+ L EE L + LRRR S + LD + +
Sbjct: 536 QKIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDLDVAEVGIRSAI 595
Query: 162 ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAW 220
E+ Q + + D L RL Y +L +S D SAR ++ L+ G E W
Sbjct: 596 ESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGLVGRRGNSYEFW 653
Query: 221 QSYISMEI 228
+Y E+
Sbjct: 654 LTYYHWEL 661
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+ KA DL+ F G + ++RI K G S+G Y+ F E AA+A ++Q
Sbjct: 983 ISNIDWKANEGDLKEVFQKYGTIETVRIPR-KVDGGSKGFGYIVFSTKEEAEAALAMHEQ 1041
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESS 503
F + L + S P+ K ++ Q+ + + G S E +
Sbjct: 1042 EFRSRPLQVRISTPQGAKRTATTIVNRVQSPAAEANGTKAPSVEPEGT 1089
>gi|255944605|ref|XP_002563070.1| Pc20g05340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587805|emb|CAP85863.1| Pc20g05340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1257
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 96/226 (42%), Gaps = 27/226 (11%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVGELWVRS 98
V +Y+RA+ FP +W DY +L ++L + RAT++CPW G LW +
Sbjct: 475 VNAIYQRAVLHFPTDVSIWEDYVMFLIGESLHRRASTTTISTLDRATRHCPWSGNLWSQY 534
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +IS++ K+ L EE L + +T LRRR S + L
Sbjct: 535 LLSSERENQSFNKISSIKHKATSTGLLDAGGLEEVLKVHVTWCSYLRRRAFLSDSTDEDL 594
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + D L RL Y L +S D SAR ++ L
Sbjct: 595 DVAEVGIRSAIESVQELGEKKYGPAYQGDPLFRLERIYIRFLSESGSWD--SARETFKGL 652
Query: 210 LKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED 255
+ G+ E W +Y E+ C+SK G + D
Sbjct: 653 VARRGSSYEFWLAYYEWEL-------------ICWSKFVQGEATVD 685
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++SNI A +DLR FS G + I ++ K TG SRG +V F + AVA N
Sbjct: 981 YVSNIAWDANEKDLRELFSKFGEIEKI-LIERKITGGSRGFGFVTFSTKDAANDAVAMND 1039
Query: 455 QMFLGKKLSI 464
+F + L +
Sbjct: 1040 HVFRSRPLRV 1049
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 215/527 (40%), Gaps = 107/527 (20%)
Query: 1 MCNARAHLEEQISRQ-DLSDS-EKFQQYMIYLKYEQSSGD--------PGRVQL---LYE 47
M +AR E + R +L D+ ++ + Y+++E S P R++L LY+
Sbjct: 388 MYSARESREAALHRAFELKDTTSEWSTFQEYIEWETSRPQRRKGQQLQPLRLELITSLYQ 447
Query: 48 RAITDFPVSSDLWLDYTQYL-DKTLK--VGNVVRDVYSRATKNCPWVGELWVRSLLSLER 104
RA+ FP + +W DY +L D++++ +G RAT++CPW G LW + +S ER
Sbjct: 448 RAVLRFPTDATIWEDYVMFLIDESMEGPIGASPIPAIERATRHCPWSGALWSQLFVSAER 507
Query: 105 SRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR 161
+ S EI + K S L + E L + T LRR L + LD + +
Sbjct: 508 AGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPESTDEDLDVAEVG 567
Query: 162 -----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWE-------RL 209
E+ Q D ++ N D L HLE+ + +SARG W+ L
Sbjct: 568 IRSAIESVQELGDKTNKAGPN-DPLF-------HLERIYIR-YLSARGSWDSAREEFKNL 618
Query: 210 LKISGAMLEAWQSYISMEI-----------------ELDHINEARSIYKRCYSKRFTGTG 252
+ G E W +Y + E+ + + + A ++ K+ +R
Sbjct: 619 IPRHGHSFEFWLAYYTWELLSWSKFMPCDSSASASRRMPNPSYATAVLKQAL-QRTDLDW 677
Query: 253 SEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKK 312
E I A++ Y ED D S +L + ++ K+L +
Sbjct: 678 PEKIMDAYISHCEHY---EDADES---------QLAIIDVRKAMKALTKR---------- 715
Query: 313 TGREKRKSDSNISYEQSPAKRQKHAPQKPKK---VH-DKEKRQ------VQNLAEENEGR 362
R++ + Q+PA +Q H PQ H D ++Q VQ + + G
Sbjct: 716 --RQREAMEQQYHQHQAPASQQYHQPQPAAAAVGAHLDTLEQQYSHADGVQPVGKRKRGN 773
Query: 363 ETKQTVEEQPKKQPIKDAV-----PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
E +Q K + DAV P R + + + + N+ +R+FF D G
Sbjct: 774 EPEQNGLTSKKAK--GDAVQSVEAPVRDR---EHASVIVKNLPKDIPQVKIRQFFRDCGK 828
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ +++L + G A ++F E AA KN++ G ++++
Sbjct: 829 LNCLQMLPGE-----PGSALLEFDTHEDALAAGTKNQKFLEGNEVTV 870
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N+ K T DL F+ G V S+RI K G++RG A+V F + AA+A N+
Sbjct: 970 YVCNLPYKTTEGDLVELFTAYGDVESVRI-PTKVNGETRGFAFVTFATKDQSNAALAMNE 1028
Query: 455 QMFLGKKLSIARS-NPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
+ F G++L++ S N ++ + + +E ++ Q GT ++ S+ +
Sbjct: 1029 KTFKGRELNVRLSTNTGAKRHQTTVVSRSESPATNAQRNGTGTPSTSPGSVSNGQ 1083
>gi|159128731|gb|EDP53845.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
A1163]
Length = 1303
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 109/250 (43%), Gaps = 30/250 (12%)
Query: 3 NARAHLEEQISRQDLSDSEKF----QQYMIYLKYE--------QSSGDPGRVQLLYERAI 50
NAR HLE I ++ D+ +F Y Y+ +E QS+ D V +Y+RA+
Sbjct: 442 NAREHLE--IKLRNAVDAGEFGLEWAAYSEYIDWEVSRHRRRRQSNFD--LVNAIYQRAV 497
Query: 51 TDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRSLLSLERSRA 107
FP S+LW DY +L GN S RAT++CP G LW + LLS ER
Sbjct: 498 LRFPTDSNLWEDYVMFLIDQNTHGNAGATTISTLERATRHCPCSGTLWSQYLLSSEREGQ 557
Query: 108 SEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR--- 161
S + I+ + K+ L EE L + LRRR S + LD + +
Sbjct: 558 SFQRIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDLDVAEVGIRS 617
Query: 162 --ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLE 218
E+ Q + + D L RL Y +L +S D SAR ++ L+ G E
Sbjct: 618 AIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGLVGRRGNSYE 675
Query: 219 AWQSYISMEI 228
W +Y E+
Sbjct: 676 FWLTYYHWEL 685
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+ KA +DL+ F G + ++RI K G S+G Y+ F E A+A ++Q
Sbjct: 1005 ISNIDWKANEDDLKEVFQKYGTIETVRIPR-KVDGGSKGFGYIVFSTKEEAETALAMHEQ 1063
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESS 503
F + L + S P+ K ++ Q+ + + G S E +
Sbjct: 1064 EFRSRPLQVRISTPQGAKRTATTIVNRVQSPAAEANGTKAPSVEPEGT 1111
>gi|70988933|ref|XP_749317.1| pre-mRNA splicing factor (Prp24) [Aspergillus fumigatus Af293]
gi|66846948|gb|EAL87279.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus fumigatus
Af293]
Length = 1303
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 109/250 (43%), Gaps = 30/250 (12%)
Query: 3 NARAHLEEQISRQDLSDSEKF----QQYMIYLKYE--------QSSGDPGRVQLLYERAI 50
NAR HLE I ++ D+ +F Y Y+ +E QS+ D V +Y+RA+
Sbjct: 442 NAREHLE--IKLRNAVDAGEFGLEWAAYSEYIDWEVSRHRRRRQSNFD--LVNAIYQRAV 497
Query: 51 TDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRSLLSLERSRA 107
FP S+LW DY +L GN S RAT++CP G LW + LLS ER
Sbjct: 498 LRFPTDSNLWEDYVMFLIDQNTHGNAGATTISTLERATRHCPCSGTLWSQYLLSSEREGQ 557
Query: 108 SEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR--- 161
S + I+ + K+ L EE L + LRRR S + LD + +
Sbjct: 558 SFQRIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDLDVAEVGIRS 617
Query: 162 --ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLE 218
E+ Q + + D L RL Y +L +S D SAR ++ L+ G E
Sbjct: 618 AIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGLVGRRGNSYE 675
Query: 219 AWQSYISMEI 228
W +Y E+
Sbjct: 676 FWLTYYHWEL 685
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+ KA +DL+ F G + ++RI K G S+G Y+ F E A+A ++Q
Sbjct: 1005 ISNIDWKANEDDLKEVFQKYGTIETVRIPR-KVDGGSKGFGYIVFSTKEEAETALAMHEQ 1063
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESS 503
F + L + S P+ K ++ Q+ + + G S E +
Sbjct: 1064 EFRSRPLQVRISTPQGAKRTATTIVNRVQSPATEANGTKAPSVEPEGT 1111
>gi|398412370|ref|XP_003857510.1| hypothetical protein MYCGRDRAFT_52616, partial [Zymoseptoria
tritici IPO323]
gi|339477395|gb|EGP92486.1| hypothetical protein MYCGRDRAFT_52616 [Zymoseptoria tritici IPO323]
Length = 1295
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 45 LYERAITDFPVSSDLWLDYTQYLDKTLKVGN-VVRDVYSRATKNCPWVGELWVRSLLSLE 103
LYERA+ P +++ WLDY ++ + + + RAT++CPW GELW R +L +
Sbjct: 494 LYERALLYEPTNTEWWLDYVDFVVTSPAAATQSLLPLIERATRHCPWSGELWARRILQAD 553
Query: 104 RSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLD---- 156
R S +EI + ++ L EE + + LRR +G E +D
Sbjct: 554 SERKSRDEIESTKHRATNAGLLDIGGMEELVRMLQEWCSYLRRHAFRAGNAEDDIDTAEV 613
Query: 157 -YSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGA 215
++ E Q+A + + D L RL + G+ AR ++++L K G
Sbjct: 614 GITMALEDVQQAGVKIYGKDFKGDPLWRLEQIQLKF-YTQGRRFDEARSLFQKLAKTVGH 672
Query: 216 MLEAWQSYISMEIELDHINEAR 237
E W+ Y + E+ + N R
Sbjct: 673 SYEFWKHYYNWELTMWGFNRFR 694
>gi|425765516|gb|EKV04193.1| Pre-mRNA splicing factor (Prp24), putative [Penicillium digitatum
PHI26]
gi|425783472|gb|EKV21320.1| Pre-mRNA splicing factor (Prp24), putative [Penicillium digitatum
Pd1]
Length = 918
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 1 MCNARAHLEEQISR-QDLSD-SEKFQQYMIYLKYEQSSGDPGR-------VQLLYERAIT 51
+ NAR E ++++ Q+ D S ++ Y Y+ +E + R V +Y+RA+
Sbjct: 424 LYNAREDFEHRLAKAQESGDRSLEWTAYSEYIDWELTRNRRKRGDFSFDLVNAIYQRAVL 483
Query: 52 DFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRAS 108
FP LW DY +L ++L + RAT++CPW G LW + LLS ER S
Sbjct: 484 HFPTDVSLWEDYVMFLIGESLHRRASTTTISTLDRATRHCPWSGNLWSQYLLSSERESQS 543
Query: 109 EEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR---- 161
+I+++ K+ L EE L + +T LRRR S + LD + +
Sbjct: 544 FNKIASIKHKATSTGLLDAGGLEEVLKVHVTWCSYLRRRAFLSDSTDEDLDVAEVGIRSA 603
Query: 162 -ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEA 219
E+ Q + D L RL Y L +S D SAR ++ L+ G+ +
Sbjct: 604 IESVQELGEKKYGPAYQGDPLFRLERIYIRFLSESGSWD--SARETFKGLVARRGSSYDF 661
Query: 220 WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED 255
W +Y E+ C+SK G + D
Sbjct: 662 WLAYYEWEL-------------ICWSKFVQGEATVD 684
>gi|302655824|ref|XP_003019695.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
gi|291183434|gb|EFE39050.1| pre-mRNA splicing factor (Prp24), putative [Trichophyton verrucosum
HKI 0517]
Length = 1402
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 196/466 (42%), Gaps = 66/466 (14%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVGELWVRS 98
+ LY+RA+ FP + LW DY +L D+++ +G V RAT++CPW G LW +
Sbjct: 535 ITSLYQRAVLRFPTDATLWEDYVMFLIDESMDGPMGVSPIPVIERATRHCPWSGALWSQL 594
Query: 99 LLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
+S ER+ S EI + K S L + E L + T LRR L + L
Sbjct: 595 FISAERAGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPESTDEDL 654
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWE--- 207
D + + E+ Q D + + N D L HLE+ + +SARG W+
Sbjct: 655 DVAEVGIRSAIESVQELGDKTDKAVPN-DPLF-------HLERIYIR-YLSARGSWDSAR 705
Query: 208 ----RLLKISGAMLEAWQSYISMEI-----------------ELDHINEARSIYKRCYSK 246
L+ G E W +Y + E+ + + + A ++ K+ +
Sbjct: 706 EEFKHLIPRHGHSFEFWLAYYTWELLSWSKFMPCDSSASASRRMPNPSYATAVLKQAL-Q 764
Query: 247 RFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQK 306
R E I A++ Y ED D S + + ++ +++ ++L + Q+
Sbjct: 765 RTDLDWPEKIMDAYISHCEHY---EDADESQLAIIDVRKAMKALTKRRQREAL-QQQQQQ 820
Query: 307 EHSVKKTGREKRKSDSNISYEQSPAKRQKHAP----QKPKKV----HDKEKRQVQNLAEE 358
+ ++ + +N Y Q + +HAP P V H ++ Q+ +
Sbjct: 821 QQQQQQQQYHHHQQLANHQYHQ--VQHAQHAPVSVGPHPDSVEQQYHYPDETQLAGKRKR 878
Query: 359 NEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
E TV ++ K I +V R + + + + N+ +R+FF D G +
Sbjct: 879 EGEPEVNGTVSKRAKGGAIP-SVETRARD-REHASVIIKNLPKDIPQVKIRQFFRDCGKL 936
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+S+++L G S G A ++F E AA KN+++ G ++++
Sbjct: 937 NSLQML----PGDS-GSALLEFDTHEDALAAGTKNQKVLEGNQVTV 977
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI- 441
R+ + + ++ NI K T DL F+ G V S+RI K G++RG +V F
Sbjct: 1065 ARSGAYEEGREIYVCNIPYKTTEGDLVELFTAYGDVESVRI-PTKVNGETRGFGFVTFAT 1123
Query: 442 ----------DDEHLAAAVAKNKQMFLGKKLSI---ARSNPKQRKDSSGER--APTEQAQ 486
D + AA+A N++ F G++L++ + K+ +++ R +P AQ
Sbjct: 1124 KLDRAVILTSDKDQSTAALAMNEKTFKGRELNVRLSTNTGAKRHQNTIVSRSESPATNAQ 1183
Query: 487 SHQQTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNV 531
N ++AS QS+G+GD L+ +P V
Sbjct: 1184 R-----NGTSTASPPPGSLPDGQSKGKGDR-HLRTLGLMNIPDTV 1222
>gi|326470511|gb|EGD94520.1| pre-mRNA splicing factor (Prp24) [Trichophyton tonsurans CBS
112818]
Length = 1279
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 199/470 (42%), Gaps = 65/470 (13%)
Query: 39 PGRVQL---LYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVG 92
P R++L LY+RA+ FP + LW DY +L D+++ +G V RAT++CPW G
Sbjct: 417 PLRLELITSLYQRAVLRFPTDATLWEDYVMFLIDESMDGPMGVSPIPVIERATRHCPWSG 476
Query: 93 ELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSG 149
LW + +S ER+ S EI + K S L + E L + T LRR L
Sbjct: 477 ALWSQLFISAERAGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPE 536
Query: 150 EVEGVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ LD + + E+ Q D + + N D L HLE+ + +SARG
Sbjct: 537 STDEDLDVAEVGIRSAIESVQELGDKTDKAVPN-DPLF-------HLERIYIR-YLSARG 587
Query: 205 VWE-------RLLKISGAMLEAWQSYISMEI-----------------ELDHINEARSIY 240
W+ L+ G E W +Y + E+ + + + A ++
Sbjct: 588 SWDSAREEFKHLIPRHGHSFEFWLAYYTWELLSWSKFMPCDSSASASRRMPNPSYATAVL 647
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
K+ +R E I A++ Y ED D S + + ++ +++ ++L
Sbjct: 648 KQAL-QRTDLDWPEKIMDAYISHCEHY---EDADESQLAIIDVRKAMKALTKRRQREAL- 702
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQ------SPAKRQKHAPQKPKKVHDKEKRQVQN 354
+ Q++ ++ + + +N Y Q +P H ++ H ++ Q+
Sbjct: 703 QQQQQQQQQQQQQQYHQHQQFANHQYHQVQHAQHAPVSVGAHPDSMEQQYHYPDETQLAG 762
Query: 355 LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ E TV ++ K I +V R + + + + N+ +R+FF D
Sbjct: 763 KRKREGEPEVNGTVSKRAKGGAIP-SVETRARD-REHASVIIKNLPKDIPQVKIRQFFRD 820
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
G ++++++L G S G A ++F E AA KN+++ G ++++
Sbjct: 821 CGKLNALQML----PGDS-GSALLEFDTHEDALAAGTKNQKVLEGNQVTV 865
>gi|452983706|gb|EME83464.1| hypothetical protein MYCFIDRAFT_154053 [Pseudocercospora fijiensis
CIRAD86]
Length = 1219
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 177/443 (39%), Gaps = 47/443 (10%)
Query: 45 LYERAITDFPVSSDLWLDYTQYLDKTLKVGN-VVRDVYSRATKNCPWVGELWVRSLLSLE 103
L+ERA+ P +++ WLDY +L+ + + + + RAT++CPW G+LW R +L +
Sbjct: 409 LFERALLHEPTNTEWWLDYIDFLNTYEQSASRTLLPLMERATRHCPWSGDLWARRILRAD 468
Query: 104 RSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLD---- 156
+ EEI + S L EE + + LRR E +D
Sbjct: 469 VEQKPREEIENTKHRATNSGLLDVGGMEELVKMLQEWCSYLRRHAFAVNSTEDDVDTAEV 528
Query: 157 -YSLIRETFQRASDYLSEQMKNTDGLLRL----YAYWAHLEQSMGKDMVSARGVWERLLK 211
++ E Q A + + D L RL ++A + + AR +++ L
Sbjct: 529 GITMALEDVQEAGKKIYGPNFDGDPLFRLEQIQIKFYAE-----ARRIQEARDIYQHLAA 583
Query: 212 ISGAMLEAWQSYISMEIEL---DHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYG 268
G + W Y EI L D I E R + T ++ A ++ +
Sbjct: 584 RHGNSSDFWAKYYYWEIWLWGYDRIRETRRVE--------TDGNGPNLATAVVQQALQQR 635
Query: 269 TLEDFDHSVQKVTPRLEELRLFRSQQESKSL---PESADQKEHSVK-KTGREKRKSDSNI 324
L DH R+ EL L QQ S+ A+ +E + K R K ++
Sbjct: 636 NL---DHP-----ERVMELYLNHFQQHESSVRLQVALAEAREFANKIAVKRAKEAEEAAA 687
Query: 325 SYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAE---ENEGRETKQTVEEQPKKQPIKDAV 381
Q + A + + DK KR+ + L R +T+ E+ +P A
Sbjct: 688 LAAQQQEQLLAAAQVEEEVTGDKRKREDEPLTNGDSHKRARTELETIAEKEGAEPSASA- 746
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
+ K + T L N+ + T ++++FF DVG SI I K + A V+F
Sbjct: 747 SAQIKRDREHNTITLRNLPVDVTDFEIKKFFRDVGNPPSINIA--KESDAQTASATVEFT 804
Query: 442 DDEHLAAAVAKNKQMFLGKKLSI 464
E + AA +N + G+++ I
Sbjct: 805 SQEDVLAAKTRNGKELRGREVKI 827
>gi|194888671|ref|XP_001976954.1| GG18501 [Drosophila erecta]
gi|190648603|gb|EDV45881.1| GG18501 [Drosophila erecta]
Length = 896
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 121/571 (21%), Positives = 219/571 (38%), Gaps = 77/571 (13%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL----------DKTLKVG-------------NVVR 78
++ ++ER++ FP+ LWL Y +++ ++T ++ N
Sbjct: 353 IRFIFERSVAKFPIVDVLWLSYIEFIQGDGGSVAEDEETAELAAKRTSRLSKGFLRNTAL 412
Query: 79 DVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRI 138
D+ R ++ P V L R L +ER+ + E+ L + ++L L +
Sbjct: 413 DLAMRGVRSRPSV-RLNHRYLDLMERADFEQPEVDQQIRAILQRIVPDMDMTVELHLDYL 471
Query: 139 DGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQSMGK 197
R E + + +R F R + LS + D + WA +E +
Sbjct: 472 AYCVRNTNAGDEEQA----ASLRAAFNRVWEELSALYGDEADTRYEVLQLWAQVEYTHLA 527
Query: 198 DMVSARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSED 255
+ +W +++ G+ W + ME E + R + + S+ G
Sbjct: 528 SPANGWHIWRQIMGYPGSSHRGLLWLGFAQMESEYNAGQGTRDVLREALSQPVLEDGIM- 586
Query: 256 ICHAWLRFEREYGTLED------FDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHS 309
+ + R+ER YGT E D + + PR R+ Q + S P+ Q
Sbjct: 587 VQELYRRYERCYGTYESIAACQALDLPAEYMKPR---SRIKPHTQLANSRPQKQQQHHQQ 643
Query: 310 VKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQT-- 367
++ ++ + + ++ EQ +RQ H Q+ K K Q E G ++
Sbjct: 644 QQQPRQQSQSNREPLNREQR--RRQAHEQQQQLKQGKKRPLSTQAAKAETSGGASQPASK 701
Query: 368 VEEQPKKQPIKDAVPGRTKGF-----TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
E QP +A R F + F+ N++ + E+L FS G + +R
Sbjct: 702 AREPANAQPDAEA---RESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGSIKDVR 758
Query: 423 ILHDKFTGKSRGLAYVDFIDDEHLAAAVA-KNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
++H K + +G+AYV+F AVA ++ + G +S+A SNP R ++ P
Sbjct: 759 LVH-KLNKQFKGIAYVEFEKPGEAQRAVAGRDGHLLKGMNISVAISNPPPRGSAADVAKP 817
Query: 482 TEQAQSHQQTGNAGTSASKESS---------IETSKQSRGRGDSVQLKGKNTFAVPRNVR 532
+ + T TS ++ +E + G + G + V +
Sbjct: 818 SVAPKRRVPTSLIPTSLVRQEVAAKKRRLLLVEPGTSTAGEATEPEANGASVANVEQ--- 874
Query: 533 PLGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
K EE PKSND+FRK+F+K
Sbjct: 875 ---------KAEE-PTAAPKSNDDFRKLFLK 895
>gi|195134184|ref|XP_002011517.1| GI11056 [Drosophila mojavensis]
gi|193906640|gb|EDW05507.1| GI11056 [Drosophila mojavensis]
Length = 785
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 183/450 (40%), Gaps = 71/450 (15%)
Query: 43 QLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGEL------WV 96
+L+YER + +P S LWLDY Y++K + + D+Y A + G L +
Sbjct: 270 KLIYERCVAKYPNDSRLWLDYIAYMEKPKEPES--EDMYHTAICD----GYLKCKPMELI 323
Query: 97 RSLLSLERSRASEEEISTVFEKSLLCA----------FSTFEEYLDLFL-TRIDGLRRRI 145
+L + + A + + E+S+L E ++++ + ++D L R+
Sbjct: 324 NRVLQINPTIAINHKYLELLEQSILNTEQVESEIKRQLQRLEPHMEMNVELQLDYLAYRV 383
Query: 146 LFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ +V L+ +R TF+ D LSE + D + WA +E + K +
Sbjct: 384 RHT-DVNNELEVKQLRNTFREVWDRLSEIYGDLADTCFEVLQLWAQVEYAKLKSPDNGAS 442
Query: 205 VWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLR 262
+W + G ++A W +Y MEIE + + ++++ + I + R
Sbjct: 443 IWCEIFSYPGNSVKAHLWVAYAQMEIEYNKREKVSIVFRQALEALSMTPEVQVIVEFYRR 502
Query: 263 FEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDS 322
ER +G E + Q+ ++ E A+
Sbjct: 503 HERCFGNYES----------------IAECQKYCEAYMEQAE------------------ 528
Query: 323 NISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVP 382
SY++ PA +Q + + P + K +R+ + + K+T+ P P K+A
Sbjct: 529 --SYKRQPAWQQPNTRRMP--AYQKPERKPAIKSSKKPLPAAKKTM---PSSSPAKEAKE 581
Query: 383 GRTKGFTDECT--AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF 440
K + T F+ N+ + T EDL F G + +R+++ K +G+AYV+F
Sbjct: 582 SNFKYSPNMETNKIFVKNLYPQCTKEDLINAFESFGVIKDVRLVYRPSNQKFKGIAYVEF 641
Query: 441 IDDEHLAAAV-AKNKQMFLGKKLSIARSNP 469
++ AV N G+ + +A SNP
Sbjct: 642 EKEQDAQNAVIGGNGIEIGGQNIEVAISNP 671
>gi|313244123|emb|CBY14973.1| unnamed protein product [Oikopleura dioica]
Length = 922
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 17/280 (6%)
Query: 20 SEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRD 79
SE + + YLKYE DP R++ Y+RA T ++ LW+++ + K +K N ++
Sbjct: 251 SELAEIWKAYLKYEIKKEDPVRIEFAYDRATTQLCLNPALWMEFLIWA-KKIKSPN-LKK 308
Query: 80 VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL-LCAFSTFEEYLDLFLTRI 138
+ RA +NC W LW LER ++E+ +F++++ + E L +
Sbjct: 309 ISLRAARNCSWDENLW------LERLNFTDEDPMDIFDEAIEALGGAGIERLQGLLWQLV 362
Query: 139 DGLRRRILFSGEVEGVLDYSLIRETFQRA---SDYLSEQMKNTDGLLRLYAYWAHLEQSM 195
RRR + +E + F+ A + + + T+ + + A +E
Sbjct: 363 LIYRRRASQNENMEETSISDDAKNAFRAAVKKAIQICTSLSATELVQEFETFGAEVEIVF 422
Query: 196 GKDMVSARGVWERLLKIS-GAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSE 254
+++ R +E+L K + G + W + +E + R IYK+ + F+ +
Sbjct: 423 FEEIARGRSKFEKLFKSTFGQDGKNWVRFAELEQFHGDLQLVRKIYKKGIT--FSKVNCD 480
Query: 255 DICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQ 294
D+ L FER YG+ E+ + + + + EE FR +Q
Sbjct: 481 DLFAKALYFERMYGSQEELESAASSIARKQEE--NFRKEQ 518
>gi|24639833|ref|NP_511047.2| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|45554213|ref|NP_996353.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|161077571|ref|NP_001096884.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|59800212|sp|Q9W4D2.1|RNP4F_DROME RecName: Full=RNA-binding protein 4F
gi|7290571|gb|AAF46022.1| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|16769448|gb|AAL28943.1| LD32008p [Drosophila melanogaster]
gi|45446810|gb|AAS65263.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|158031720|gb|ABW09340.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|220947218|gb|ACL86152.1| Rnp4F-PA [synthetic construct]
gi|220956760|gb|ACL90923.1| Rnp4F-PA [synthetic construct]
Length = 941
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 111/524 (21%), Positives = 208/524 (39%), Gaps = 88/524 (16%)
Query: 5 RAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYT 64
+ HL+E D S+ K Y + ++ ++ER++ FP+ LWL Y
Sbjct: 321 KQHLDETTRGWDWSEQHKAHVYDVETLSLDDDLKNAVIRFIFERSVAKFPIVDVLWLSYI 380
Query: 65 QYLD------------------------KTLKVG---NVVRDVYSRATKNCPWVGELWVR 97
+++ K L G N D+ +R ++ P V +L R
Sbjct: 381 EFIQFEGVTVPENEDENEVTAEMVAKRAKRLGKGFLRNTELDLANRGVRSHPSV-QLNHR 439
Query: 98 SLLSLERS----RASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEG 153
L +ERS +EEI + ++ + T E +LD RI R S E +
Sbjct: 440 FLDLMERSDFELAEVDEEIRLILQRIVTDMDMTVELHLDYLAYRI----RNTNASDEQQ- 494
Query: 154 VLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKI 212
+ +R F A + L+ + D + WA +E + + R +W +++
Sbjct: 495 ---VASLRAAFNHAWEELTVLYGDQADTRYEVLQLWAQVEYTQLGSPDNGREIWRQIMGY 551
Query: 213 SGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTL 270
G+ + W ++ ME E + + R + ++ S+ G + + R+ER YGT
Sbjct: 552 PGSSIRGLLWLNFAQMESEYNGGHGTRDVLRKALSQPVLENGLM-VQEFFRRYERCYGTY 610
Query: 271 EDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSP 330
ES + ++ D VK R K S S +Q
Sbjct: 611 ------------------------ESIAACQALDLPVEYVKPRSRIKPNSQSAYPRQQKL 646
Query: 331 AKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAV--PGRTKGF 388
RQ+ + ++ +++R+ + ++ + ++ K +++ + +P A P + KG
Sbjct: 647 KPRQQQQQTNREPLNREQRRRQAHEQQQQQQQQQKHGIKKS-RTEPSGGATSPPSKVKGP 705
Query: 389 TDE---------------CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
+ F+ N++ + E+L FS G + +R++H K + +
Sbjct: 706 ANAEAKESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVH-KLNKQFK 764
Query: 434 GLAYVDFIDDEHLAAAVA-KNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F AVA ++ +F G +S+A SNP R S+
Sbjct: 765 GIAYVEFEKPGEAQRAVAGRDGCLFKGMNISVAISNPPPRGTSA 808
>gi|326478692|gb|EGE02702.1| pre-mRNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 1545
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 199/470 (42%), Gaps = 65/470 (13%)
Query: 39 PGRVQL---LYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVG 92
P R++L LY+RA+ FP + LW DY +L D+++ +G V RAT++CPW G
Sbjct: 423 PLRLELITSLYQRAVLRFPTDATLWEDYVMFLIDESMDGPMGVSPIPVIERATRHCPWSG 482
Query: 93 ELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSG 149
LW + +S ER+ S EI + K S L + E L + T LRR L
Sbjct: 483 ALWSQLFISAERAGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPE 542
Query: 150 EVEGVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ LD + + E+ Q D + + N D L HLE+ + +SARG
Sbjct: 543 STDEDLDVAEVGIRSAIESVQELGDKTDKAVPN-DPLF-------HLERIYIR-YLSARG 593
Query: 205 VWE-------RLLKISGAMLEAWQSYISMEI-----------------ELDHINEARSIY 240
W+ L+ G E W +Y + E+ + + + A ++
Sbjct: 594 SWDSAREEFKHLIPRHGHSFEFWLAYYTWELLSWSKFMPCDSSASASRRMPNPSYATAVL 653
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
K+ +R E I A++ Y ED D S + + ++ +++ ++L
Sbjct: 654 KQAL-QRTDLDWPEKIMDAYISHCEHY---EDADESQLAIIDVRKAMKALTKRRQREAL- 708
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQ------SPAKRQKHAPQKPKKVHDKEKRQVQN 354
+ Q++ ++ + + +N Y Q +P H ++ H ++ Q+
Sbjct: 709 QQQQQQQQQQQQQQYHQHQQFANHQYHQVQHAQHAPVSVGAHPDSMEQQYHYPDETQLAG 768
Query: 355 LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ E TV ++ K I +V R + + + + N+ +R+FF D
Sbjct: 769 KRKREGEPEVNGTVSKRAKGGAIP-SVETRARD-REHASVIIKNLPKDIPQVKIRQFFRD 826
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
G ++++++L G S G A ++F E AA KN+++ G ++++
Sbjct: 827 CGKLNALQML----PGDS-GSALLEFDTHEDALAAGTKNQKVLEGNQVTV 871
>gi|449296357|gb|EMC92377.1| hypothetical protein BAUCODRAFT_78497 [Baudoinia compniacensis UAMH
10762]
Length = 1301
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 184/460 (40%), Gaps = 39/460 (8%)
Query: 23 FQQYMIYLKYEQ---SSGDPGR--VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVV 77
F + YL++E+ + G GR +YERA+ FP ++ WLDYT ++ K + V
Sbjct: 458 FAAFASYLQWERKHVNRGVFGRELCCAVYERALLRFPTYTEWWLDYTDFVAMD-KAASSV 516
Query: 78 RDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLF 134
+ RAT++CPW G+LW +L + +I + S L EE L +
Sbjct: 517 LPLLERATRHCPWSGDLWGSRILRADVEGKPHVDIEATKHRATNSGLLDVGGMEELLKVL 576
Query: 135 LTRIDGLRRRILFSGEVEGVLD-----YSLIRETFQRASDYLSEQMKNTDGLLRLYAYWA 189
LRR E +D ++ E Q+A + + D RL
Sbjct: 577 QQWCSYLRRHAFKRTSSEDDVDTAEVGITMALEDIQQAGTRIYGKGFTGDPRFRLETIQL 636
Query: 190 HLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFT 249
S + AR +++RL + + W Y E+ L R ++ T
Sbjct: 637 KF-LSEARRFDDARAIYKRLALLHKDSFDFWSKYYVWEMWLWGFERIRDAHRVE-----T 690
Query: 250 GTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHS 309
D+ A L + + S +KV L F+ + + L +
Sbjct: 691 SDNGPDLATAVL----QQALAQKHIDSPEKVVDLY--LNHFQQHESGERLQAALVDAREY 744
Query: 310 VKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQ--- 366
VK+ +R ++ ++ + P ++ AP + + KR+ + +G+ +K
Sbjct: 745 VKQVA-ARRAKEAELAAVKQPEPQE--APMQVESTITGGKRKAEEHIVNGDGKRSKTDAV 801
Query: 367 --TVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL 424
TV Q + +V + K + T + N+ + D+++FF D+G SI IL
Sbjct: 802 PITVANQSEPSA---SVSAQAKRDREHNTITVRNLAPEVQELDIKKFFRDIGQPRSINIL 858
Query: 425 HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
DK + + A V+F E + AA +N + G+++ I
Sbjct: 859 QDKDSDTA--TATVEFDSHEDVLAAKIRNGKELQGREVRI 896
>gi|327306541|ref|XP_003237962.1| pre-mRNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326460960|gb|EGD86413.1| pre-mRNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 1302
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 195/468 (41%), Gaps = 66/468 (14%)
Query: 39 PGRVQL---LYERAITDFPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVG 92
P R++L LY+RA+ FP + LW DY +L D+++ +G V RAT++CPW G
Sbjct: 470 PLRLELITSLYQRAVLRFPTDATLWEDYVMFLIDESMDGPMGVSPIPVIERATRHCPWSG 529
Query: 93 ELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSG 149
LW + +S ER+ S EI + K S L + E L + T LRR L
Sbjct: 530 ALWSQLFISAERAGLSFAEILELKHKATRSGLLDAAGINEVLKVHTTWCSYLRRWALQPE 589
Query: 150 EVEGVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
+ LD + + E+ Q D + + N D L HLE+ + +SARG
Sbjct: 590 STDEDLDVAEVGIRSAIESVQELGDKTDKAVPN-DPLF-------HLERIYIR-YLSARG 640
Query: 205 VWE-------RLLKISGAMLEAWQSYISMEI-----------------ELDHINEARSIY 240
W+ L+ G E W +Y + E+ + + + A ++
Sbjct: 641 SWDSAREEFKHLIPRHGHSFEFWLAYYTWELLSWSKFMPCDSSASASRRMPNPSYATAVL 700
Query: 241 KRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLP 300
K+ +R E I A++ Y ED D S + + ++ +++ ++L
Sbjct: 701 KQAL-QRTDLDWPEKIMDAYISHCEHY---EDADESQLAIIDVRKAMKALTKRRQREAL- 755
Query: 301 ESADQKEHSVKKTGREKRKSDSNISYEQ-------SPAKRQKHAPQKPKKVHDKEKRQVQ 353
+ Q++ ++ + +N Y Q +P H ++ H ++ Q+
Sbjct: 756 QQQQQQQQQQQQQQYHHHQQLANHQYHQVQDAAQHAPVSAGAHLDSVEQQYHYPDETQLA 815
Query: 354 NLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFS 413
+ E TV ++ K I +V R + + + + N+ +R+FF
Sbjct: 816 GKRKREGEPEVNGTVSKRAKGGAIP-SVETRARD-REHASVIVKNLPKDIPQVKIRQFFR 873
Query: 414 DVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
D G ++S+++L G S G A ++F E AA KN+++ G +
Sbjct: 874 DCGKLNSLQML----PGDS-GSALLEFDTHEDALAAGTKNQKILEGNQ 916
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ NI K T DL F+ G V S+RI K G +RG +V F + AA+A N+
Sbjct: 988 YVCNIPYKTTEGDLVELFTAYGDVESVRI-PTKVNGDTRGFGFVTFATKDQSTAALAMNE 1046
Query: 455 QMFLGKKLSIARS-NPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
+ F G++L++ S N ++ + + +E ++ Q T++ S+ QS+G+
Sbjct: 1047 KTFKGRELNVRLSTNTGAKRHQNTIVSRSESPATNAQRNGTSTASPLPGSLPDG-QSKGK 1105
Query: 514 GDSVQLKGKNTFAVPRNV 531
GD L+ +P V
Sbjct: 1106 GDR-HLRTLGLMNIPDTV 1122
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 197/481 (40%), Gaps = 66/481 (13%)
Query: 26 YMIYLKYEQSSGDPGRVQL--LYERAITDFP---------VSSDLWLDYTQYLDKTLKVG 74
Y Y+ YE+ + P L +YERAI + + L + +T Y D L++
Sbjct: 262 YNNYITYERRAKKPDLSILAGIYERAIAEAAKRRFGGEEGAEAALSVFWTGYAD-ALRIH 320
Query: 75 NVVRD----VYSRATKNCPWVGELWVRSLLSLERSRASE----EEISTVFEKSLLCAFST 126
++ V R ++ P GELW R + LE + E +S V+++++
Sbjct: 321 QADQEAQMKVLQRGLRSVPGCGELWARYIRFLEEYEMLDIGVLEPVSGVYDRAMGTGLFV 380
Query: 127 --FEEYLDLFLTRIDGLRRRI---------LFSGEVEGVLDYSLIRETFQRASDYLSEQM 175
EE + L L R +RR+ GE E + +L R T Q ++
Sbjct: 381 KDPEEIVPLVLARAGYEKRRMESVAAGVPWAGVGEEEEDMMGNLFR-TLQDGITFVRSAS 439
Query: 176 KNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINE 235
K D RL + A + + A VW + AW +Y + I E
Sbjct: 440 KAGDPRYRLEKFLAQT-YTQYEQYAEAAQVWRSAAEHYKTSYVAWTAYADALVRDSRIPE 498
Query: 236 ARSIYKRCYSKRFTGTG-SEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLF---- 290
AR ++ S R G E I AWL E YGT++ ++Q +E R+
Sbjct: 499 ARKALEQ--SARQNGMDWPEAIWEAWLALEHAYGTVQ----TLQSCLDSVERGRMLVGAK 552
Query: 291 RSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKH-------APQKPKK 343
R+++ K++ + Q+ +V S +S +S + Q+ AP P++
Sbjct: 553 RAREAEKAMQLATQQQAANVPV---------SQVSVPESATQGQQDVDMDVDGAPH-PQE 602
Query: 344 VHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKA 403
KR+ + GR +Q + K+ D P K + CT F++++
Sbjct: 603 AGLSLKRKAEEPLRSVGGRGGEQGQAGEGSKKVKIDNAPS-LKRDRENCTVFVADLPSNT 661
Query: 404 TYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
T +DL+ F D G + I+I T +A V+F + E + AA+ K+K+ G++++
Sbjct: 662 TDDDLKALFKDCGSIRDIKITSLPNT----HVATVEFSERESVPAALTKDKKRINGEEVA 717
Query: 464 I 464
+
Sbjct: 718 V 718
>gi|119191127|ref|XP_001246170.1| hypothetical protein CIMG_05611 [Coccidioides immitis RS]
gi|392869018|gb|EAS30379.2| pre-mRNA splicing factor [Coccidioides immitis RS]
Length = 1296
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 1 MCNARAHLEEQISRQDLSD--SEKFQQYMIYL------KYEQSSGDPGRVQLLYERAITD 52
+C+AR E + R S+ + ++ Y YL KY++ + L++RA+
Sbjct: 427 ICDARETSELALQRAVESNDTTAEWTAYTQYLELETTHKYKKPLYGFQLITALFQRALLR 486
Query: 53 FPVSSDLWLDYTQYL-DKTL--KVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASE 109
FP ++LW DY Y+ ++++ + V + RA ++CPW G LW + LLS ER+ S
Sbjct: 487 FPTDANLWDDYVIYIVNESMHRRTNEPVIPILERAARHCPWSGSLWSQLLLSAERAGYSF 546
Query: 110 EEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR----- 161
++IS + ++ L + +E L + T LRR S + LD + +
Sbjct: 547 QDISDLKHRATRTGLLEAAGVDEVLKVHTTWCSYLRRLPFQSNSTDEDLDVAEVGMRSAI 606
Query: 162 ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAW 220
E+ Q D + + N D L RL Y +L +S D SAR ++ L+ G E W
Sbjct: 607 ESVQAIGDKGDKTVPN-DPLFRLERIYIRYLSESGSWD--SARETFKGLVGRHGHTYEFW 663
Query: 221 QSYISMEIELDHINEARSIYKRCYSKRFTGTG 252
+ + E+ C+SK G G
Sbjct: 664 LMFYTWEL-------------LCWSKFTQGDG 682
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
R+ F + +SN++ KAT +DL F+ G V RI K G S+G +V F
Sbjct: 978 ARSGAFEEGREIHISNLDWKATEDDLIELFTAFGKVEVARI-PTKADGGSKGFGFVAFST 1036
Query: 443 DEHLAAAVAKNKQMFLGKKLSI 464
E AA+A +++ F + L +
Sbjct: 1037 PEAANAALAMDQKEFRSRPLRV 1058
>gi|453086241|gb|EMF14283.1| hypothetical protein SEPMUDRAFT_155052 [Mycosphaerella populorum
SO2202]
Length = 1387
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 45 LYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLER 104
LYERA+ P + + WLDY +L K +++ V RAT++CPW GELW R +L +
Sbjct: 567 LYERAVLLEPTNLEWWLDYVDFLMTDPKSTSLL-SVIERATRHCPWSGELWARRILRADV 625
Query: 105 SRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLI- 160
+ S ++I + ++ L EEY+ + LRR E +D +
Sbjct: 626 EQLSRDDIGNIKHRATNAGLLDVGGLEEYVKMLQEWCSYLRRYAFRETSTEDDIDTAEFG 685
Query: 161 ----RETFQRASDYLSEQMKNTDGLLRL----YAYWAHLEQSMGKDMVSARGVWERLLKI 212
E Q A + D L RL ++A + K M AR +++ L
Sbjct: 686 MHSALEDVQEAGKRVYGADFQGDPLFRLEQIQIKFFAEV-----KRMDQARDIFKSLSTR 740
Query: 213 SGAMLEAWQSYISMEIEL 230
G + W SY + EI L
Sbjct: 741 LGGSFDFWNSYYAFEIWL 758
>gi|449550073|gb|EMD41038.1| hypothetical protein CERSUDRAFT_62981 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 357 EENEGRETKQTVE--EQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKATYEDLRRF 411
E N+ RE + E E+ +P VP T K D + F+ N++ AT E+++
Sbjct: 42 EANKLRELQAAAEKAERSGSEPGDTGVPMETEEDKAAADSRSIFVGNVDYSATPEEIQVH 101
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSN 468
F G ++ + IL DKFTG +G AYV+F + EH+ AA A + +F G+ K++ R+N
Sbjct: 102 FQSCGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAATAMDNSLFRGRLIKVTAKRTN 160
>gi|340501460|gb|EGR28246.1| hypothetical protein IMG5_180460 [Ichthyophthirius multifiliis]
Length = 861
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 209/486 (43%), Gaps = 79/486 (16%)
Query: 8 LEEQISRQDLSDSEKFQQYMIYL--KYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQ 65
LEE Q ++ E+F + +I L K E+ +V +ER++ + + ++W + +
Sbjct: 164 LEENYENQ--TEKEQFLKELIELQEKDEKKRISNEKVINFFERSLQENLTNLNIWNCFLE 221
Query: 66 YLDKTLKVGNVVRDVYSRATKNCP-----WVGELWV--RSLLSLERSRASEEEISTVFEK 118
+L K + VY RA K P +G L + ++ + E AS + I FE
Sbjct: 222 FLKKKKIPILKQKIVYQRALKLFPNDLNITLGFLRIQEKNSVFFEELYASFQSIIGNFEH 281
Query: 119 SLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEV--EGVLDYSLIRETFQRASDYLSEQMK 176
C + F+ ++ + R++L ++ E + + +++E A Y +
Sbjct: 282 QKECQYILFQNFIAFSV-------RKMLEVDQIKEETIQNMRIVQEN---ALQYFQNEEN 331
Query: 177 NTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIE-LDHINE 235
+ L WA +E + KD+ + V E++++ G L+ W YI +E + +I
Sbjct: 332 ENLEIEILLK-WAEIEYHIVKDIKKGQSVCEKIVRKYGNYLKNWIKYIELEKNCVKNIQN 390
Query: 236 ARSIYKRC--YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQ 293
RSI KR Y K GS +I W+ FE+ YG LE+ ++ K+ + +E+ L +Q
Sbjct: 391 LRSIIKRMIEYVKD-DILGSLNI---WVDFEQLYGNLENIENIEDKIIEKSKEVLL--NQ 444
Query: 294 QESKSLPESADQKEHSV----KKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEK 349
+E + + Q + ++ K+ +E + + N ++++ + + K++ + +
Sbjct: 445 EEEDDIEVNLTQNQENLNLNKKRKNQEYEEEEGNNIFKKNKGNNNQEIKKNEKQIKNNNQ 504
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLR 409
+Q++ T F+ N+ + +++
Sbjct: 505 ENIQHIQ------------------------------------TVFIKNLPTHYSEQEIN 528
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV--AKNKQMFLGKKLSIARS 467
F + + SIRI+ GK +GLAY+DF++ E A A N ++ L +A S
Sbjct: 529 NLFENQQNIKSIRIVK---KGK-KGLAYIDFLNQEEAEKACKQANNLKIDDNHILYVALS 584
Query: 468 NPKQRK 473
P + K
Sbjct: 585 APPKEK 590
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T FL NI+ K D+R FF++ + I I D GK +G AYV F D L +
Sbjct: 686 TVFLKNISFKTRESDIREFFTNY-IIDQILIAKD-LDGKPKGYAYVSFKDQNTLYKVLQI 743
Query: 453 NKQMFLGKKLSIARS 467
K + ++ I +S
Sbjct: 744 KKGIIKNREFEILKS 758
>gi|392568671|gb|EIW61845.1| polyadenylate-binding protein 2 [Trametes versicolor FP-101664 SS1]
Length = 192
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKATYEDLRRFFSDVGGV 418
RE + E+ + P D P T K TD + ++ N++ AT E++++ F G +
Sbjct: 45 RELQAAAEKAERSTPTGDQ-PMETEEEKAATDSRSIYVGNVDYSATPEEIQQHFQACGTI 103
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSN 468
+ + IL DKFTG +G AYV+F + EH+ AA++ + +F G+ K++ R+N
Sbjct: 104 NRVTILCDKFTGHPKGYAYVEFSETEHVDAALSMDNSLFRGRLIKVTAKRTN 155
>gi|72390421|ref|XP_845505.1| RNA-binding protein RBP14 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360364|gb|AAX80780.1| RNA-binding protein RBP14, putative [Trypanosoma brucei]
gi|70802040|gb|AAZ11946.1| RNA-binding protein RBP14, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261328909|emb|CBH11887.1| RNA-binding protein RBP14, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDL 408
+RQV +L E+ + ++T + ++ V + + F+ ++ + T DL
Sbjct: 27 QRQVNDLQEDLRLKTLQETAAQDEGQRKTTGVVASK------NTSVFVGGMDPRTTESDL 80
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
R FFS G + + +L DKFTG+ +G AY++F E AAA+ KN Q GK L++A
Sbjct: 81 RVFFSACGTIKRLTMLRDKFTGQQKGTAYIEFETVEQAAAAIVKNGQSLHGKPLTVA 137
>gi|76156671|gb|AAX27833.2| SJCHGC03532 protein [Schistosoma japonicum]
Length = 245
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 48 RAITDFPVSSDLWLDYTQYLDKTLKVG-NVVRDVYSRATKNCPWVGELWVRSLLSLE--- 103
RAIT + + LW+ Y Y++ L+ + ++ + R+ +NCPW ELW R L+ E
Sbjct: 24 RAITAHCLDTSLWIRYADYVESQLETDISRLQKLLGRSVRNCPWCVELWQRYALATETVT 83
Query: 104 --------RSRASEE-----------EISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRR 144
+ +E+ E+ ++E +L F+ ++ L ++ + D RR
Sbjct: 84 LENISLKPNTNGAEQESVSKESDFFKEVEGIYETALAAGFTNPDDILRIWRSYCDLHLRR 143
Query: 145 ILFSGEVEGVLDY--SLIRETFQRASDYLSEQMK---NTDGLLRLYAYWAHLEQSMGKDM 199
+ + DY SL+R TF RA DY ++ N D L Y+A +E +
Sbjct: 144 LCSLDKNSLSWDYRLSLLRATFGRAIDYCFGLLRSQLNVDW--SLINYYAFIEAKYFDNK 201
Query: 200 VSARGVWERLLKI--SGAMLEAWQSYISME 227
AR VW L+K+ G+ E W +YI E
Sbjct: 202 ERARSVWTGLMKLPGHGSRAEYWLAYIQFE 231
>gi|317029450|ref|XP_001391615.2| pre-mRNA splicing factor (Prp24) [Aspergillus niger CBS 513.88]
Length = 1302
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 187/514 (36%), Gaps = 86/514 (16%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 491 VNAVYQRAVLRFPTDANMWEDFIMFLIDESMHGNTNTTTISTLDRATRHCPCSGSLWSQY 550
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L EE L + LRRR S + +
Sbjct: 551 LLSSEREGQSFSKIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDI 610
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 611 DVAEVGIRSAIESVQELGEKKYGRNYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 668
Query: 210 LKISGAMLEAWQSYISMEI--------ELDHINEARSIYKRCYS--------KRFTGTGS 253
+ G E W +Y E+ I+ AR Y+ KR
Sbjct: 669 VGRRGNSYEFWLTYYEWELISWSKFVQNETTIDAARRTPNPSYATAVLKQAIKRTDLDWP 728
Query: 254 EDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV--- 310
E I ++ +Y ED D + + +R +++E + +A Q E +
Sbjct: 729 EKIMQTYIAHCEDY---EDSDELQLAILETRKAMRAVTARRERDARELAARQAEQAAVVE 785
Query: 311 -KKTGREKRKSDSNISYEQSPAKRQK------HAPQKPKKVHDKEKRQ-----VQNLAE- 357
T EKRK + PAKR + P + V + R+ V+NL
Sbjct: 786 QATTQAEKRKREEETGMNGLPAKRARAEEAEVSVPVAAEPVALRRDRENATVVVKNLPHG 845
Query: 358 -----------------------ENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDE--- 391
++G+ +E K + + R + DE
Sbjct: 846 ITEHKVRQFFRHCGTINSAKMLSSDDGKSETAIIEFNSKDEAV--VAQTRDQKIIDEHTI 903
Query: 392 -------CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDD 443
T F++N A + +R F + G + IR K+ R YV F
Sbjct: 904 EVQFGSGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPSLKYNTHRR-FCYVQFKTAG 962
Query: 444 EHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
E +A + G L S+P +R+D G
Sbjct: 963 EAYSATQLDGATVGNGLHLVAKISDPTRRQDRQG 996
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ +D+ F G V +RI K G S+G YV F E A++ ++Q
Sbjct: 1006 VSNLDWKASEQDVEELFLRFGTVELVRIPR-KVDGGSKGFCYVVFSSKEEAEASLVMHEQ 1064
Query: 456 MFLGKKLSIARSNPKQRKDSS-------GERAPT 482
F + L + S P+ K S+ G R+P+
Sbjct: 1065 QFRSRPLHVKLSTPQGAKRSATTILSRVGTRSPS 1098
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 489 VNAVYQRAVLRFPTDANMWEDFVMFLIDESMHGNANTTTISTLERATRHCPCSGTLWSQY 548
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L + EE L + LRRR + L
Sbjct: 549 LLSSEREGQSFSKIADIKHKATSTGLLDVAGMEEVLKVHTAWCSYLRRRAFMPDSTDEDL 608
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 609 DVAEVGIRSAIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 666
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 667 MGRRGNSYEFWLTYYEWEL 685
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ D++ FS G V +R L K G S+G YV F + E AA+A + Q
Sbjct: 1001 VSNVDFKASERDVQELFSKYGTVELVR-LPRKVDGGSKGFGYVVFSNKEEATAALAMDGQ 1059
Query: 456 MFLGKKLSIARSNPKQRKDSS 476
+ + L + S P+ K S+
Sbjct: 1060 EYRSRTLHVKISAPQSTKRSA 1080
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 488 VNAVYQRAVLRFPTDANMWEDFVMFLIDESMHGNANTTTISTLERATRHCPCSGTLWSQY 547
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L + EE L + LRRR + L
Sbjct: 548 LLSSEREGQSFSKIADIKHKATSTGLLDVAGMEEVLKVHTAWCSYLRRRAFMPDSTDEDL 607
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 608 DVAEVGIRSAIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 665
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 666 MGRRGNSYEFWLTYYEWEL 684
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ D++ FS G V +R L K G S+G YV F + E AA+A + Q
Sbjct: 1000 VSNVDFKASERDVQELFSKYGTVELVR-LPRKVDGGSKGFGYVVFSNKEEATAALAMDGQ 1058
Query: 456 MFLGKKLSIARSNPKQRKDSS 476
+ + L + S P+ K S+
Sbjct: 1059 EYRSRTLHVKISAPQSTKRSA 1079
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 181/458 (39%), Gaps = 73/458 (15%)
Query: 18 SDSEKFQQYMIYLKYE--QSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGN 75
S + + YM + E +S+ + + LYERAI +P+ +LWL YT +L K +
Sbjct: 265 SANHSLEAYMDLINDESRRSTAELQYITTLYERAIVLYPLIPELWLQYTAWLSKVDFSSS 324
Query: 76 VVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFS----TFEEYL 131
V RAT+NC W+G +W L + S AS S V E+ C S F+E +
Sbjct: 325 QASSVAERATRNCSWIGRIWSIKLTYMTLSGAS---TSAVCEEKDRCLNSNLLVNFDEVI 381
Query: 132 DLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNT-DGLLRLYAYWAH 190
D F G + L+ E ++ + DYL + K + D +R+ +
Sbjct: 382 DFF----SGFLKACLYLSSNEDK-PQEFLKHQIHKVEDYLRKNHKGSKDARMRIELSKIY 436
Query: 191 LEQSMGKDMVSARGVWERLLKISGAMLEAWQS-YISM---EIELDHINEARSIYKRCYSK 246
L + D S W + W S YIS EL +S+YK
Sbjct: 437 LYSEIS-DFESVEKCWSDMFHDFQNQALYWISRYISTMKYNPELAAETLKKSLYK----- 490
Query: 247 RFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQK 306
++ L F+ Y ++ D ++ T L ++ + + L A++
Sbjct: 491 --------NVDQPQLLFQF-YQSIMDLNNDCFTNTSHLYDVLNAQRISFKRQLDSFAEET 541
Query: 307 EHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQ 366
+ +V+ T +P KV Q + A ++ R+ Q
Sbjct: 542 KQTVENT--------------------------EPLKV-----PQADDTAALSKKRKPGQ 570
Query: 367 TVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHD 426
+ K +PI+ R + +E T ++N+ + +L+ FF D G + I IL D
Sbjct: 571 EGDVFKKSKPIEQ---HRNR---EELTVLVTNLPSDISENELKIFFKDCGNIIRIFILED 624
Query: 427 KFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
K +A ++F + + AA ++ + G ++S+
Sbjct: 625 --NQKDVKVAQIEFSETSEVLAAKTRDLKSIRGHEISV 660
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus
NRRL 1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus
NRRL 1]
Length = 1310
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-DKTLKVGN---VVRDVYSRATKNCPWVGELWVR 97
+ +Y+RA+ FP + LW DY YL D+ GN + RAT++CP G LW +
Sbjct: 489 LNAIYQRAVLRFPTDASLWEDYVMYLIDQRNFHGNSNAATISMLDRATRHCPCHGGLWSQ 548
Query: 98 SLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGV 154
LLS ER S + I+ + K+ L EE L + LRRR + +
Sbjct: 549 YLLSSEREGQSFQRIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLTDSTDED 608
Query: 155 LDYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWER 208
LD + + E+ Q + + D L RL Y +L +S D SAR ++
Sbjct: 609 LDVAEVGIRSAIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKG 666
Query: 209 LLKISGAMLEAWQSYISMEI 228
L++ G E W +Y E+
Sbjct: 667 LVRRRGNSYEFWLTYYHWEL 686
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+ KA+ +DL+ FS G V ++RI K G S+G Y+ F E AA+A ++Q
Sbjct: 1010 VSNIDWKASEDDLKDLFSKYGRVETVRIPR-KVDGGSKGFGYIVFSTKEEANAALAMHEQ 1068
Query: 456 MFLGKKLSIARSNPKQRKDSS 476
F + L + S P+ K S+
Sbjct: 1069 EFRSRPLQVRLSTPQGAKRSA 1089
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 489 VNAVYQRAVLRFPTDANMWEDFVMFLIDESMHGNANTTTISTLERATRHCPCSGTLWSQY 548
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L + EE L + LRRR + L
Sbjct: 549 LLSSEREGQSFSKIADIKHKATSTGLLDVAGMEEVLKVHTAWCSYLRRRAFMPDSTDEDL 608
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 609 DVAEVGIRSAIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 666
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 667 MGRRGNSYEFWLTYYEWEL 685
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ D++ FS G V +R L K G S+G YV F + E AA+A + Q
Sbjct: 1001 VSNVDFKASERDVQELFSKYGTVELVR-LPRKVDGGSKGFGYVVFSNKEEATAALAMDGQ 1059
Query: 456 MFLGKKLSIARSNPKQRKDSS 476
+ + L + S P+ K S+
Sbjct: 1060 EYRSRTLHVKISAPQSTKRSA 1080
>gi|17543644|ref|NP_500025.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
gi|373220572|emb|CCD74059.1| Protein Y55F3AM.3, isoform a [Caenorhabditis elegans]
Length = 580
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%)
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
G E + + P+ P K+A T D+ T + I DL FFS VG V
Sbjct: 139 GPERRDVMPFNPRHSPPKNAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRD 198
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
+RI+ D TG+S+G+ YV+F D+E + +A N Q +G L I R+ ++ + ++ A
Sbjct: 199 VRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSVA 258
Query: 481 PT 482
T
Sbjct: 259 ST 260
>gi|134076092|emb|CAK39451.1| unnamed protein product [Aspergillus niger]
Length = 1132
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 187/514 (36%), Gaps = 86/514 (16%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 321 VNAVYQRAVLRFPTDANMWEDFIMFLIDESMHGNTNTTTISTLDRATRHCPCSGSLWSQY 380
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L EE L + LRRR S + +
Sbjct: 381 LLSSEREGQSFSKIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDI 440
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 441 DVAEVGIRSAIESVQELGEKKYGRNYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 498
Query: 210 LKISGAMLEAWQSYISMEI--------ELDHINEARSIYKRCYS--------KRFTGTGS 253
+ G E W +Y E+ I+ AR Y+ KR
Sbjct: 499 VGRRGNSYEFWLTYYEWELISWSKFVQNETTIDAARRTPNPSYATAVLKQAIKRTDLDWP 558
Query: 254 EDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV--- 310
E I ++ +Y ED D + + +R +++E + +A Q E +
Sbjct: 559 EKIMQTYIAHCEDY---EDSDELQLAILETRKAMRAVTARRERDARELAARQAEQAAVVE 615
Query: 311 -KKTGREKRKSDSNISYEQSPAKRQK------HAPQKPKKVHDKEKRQ-----VQNLAE- 357
T EKRK + PAKR + P + V + R+ V+NL
Sbjct: 616 QATTQAEKRKREEETGMNGLPAKRARAEEAEVSVPVAAEPVALRRDRENATVVVKNLPHG 675
Query: 358 -----------------------ENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDE--- 391
++G+ +E K + + R + DE
Sbjct: 676 ITEHKVRQFFRHCGTINSAKMLSSDDGKSETAIIEFNSKDEAV--VAQTRDQKIIDEHTI 733
Query: 392 -------CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDD 443
T F++N A + +R F + G + IR K+ R YV F
Sbjct: 734 EVQFGSGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPSLKYNTHRR-FCYVQFKTAG 792
Query: 444 EHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
E +A + G L S+P +R+D G
Sbjct: 793 EAYSATQLDGATVGNGLHLVAKISDPTRRQDRQG 826
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ +D+ F G V +RI K G S+G YV F E A++ ++Q
Sbjct: 836 VSNLDWKASEQDVEELFLRFGTVELVRIPR-KVDGGSKGFCYVVFSSKEEAEASLVMHEQ 894
Query: 456 MFLGKKLSIARSNPKQRKDSS-------GERAPT 482
F + L + S P+ K S+ G R+P+
Sbjct: 895 QFRSRPLHVKLSTPQGAKRSATTILSRVGTRSPS 928
>gi|343471000|emb|CCD16472.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 212
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
F+ + F+ ++ + T DLR FFS G + + +L DKFTG+ +G AY++F E
Sbjct: 60 FSKNASVFVGGMDPRTTESDLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDTVEQAT 119
Query: 448 AAVAKNKQMFLGKKLSIA 465
+A+ KN Q GK L++A
Sbjct: 120 SAIVKNGQSLHGKPLTVA 137
>gi|390601291|gb|EIN10685.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 194
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 331 AKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVE-EQPKKQPIKDAVPGRTKGFT 389
AKR + P+++ ++R + E + RE ++ E EQ + P+ P
Sbjct: 11 AKRGSRKRENPQEIQMMKQRVKEMEEEAAKLRELQEQAEKEQSQSGPMDVDDPTAA---- 66
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F + EH+ AA
Sbjct: 67 DSRSVYVGNVDYGATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFSEPEHVDAA 126
Query: 450 VAKNKQMFLGKKLSI 464
VA + +F G+ L +
Sbjct: 127 VALDNSLFRGRLLKV 141
>gi|308473560|ref|XP_003099004.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
gi|308267807|gb|EFP11760.1| hypothetical protein CRE_26746 [Caenorhabditis remanei]
Length = 651
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
G E + + P+ P K+A + D+ T + I DL FFS VG V
Sbjct: 210 GPERRDVMPFNPRHSPPKNAKLELSPEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRD 269
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
+RI+ D TG+S+G+ YV+F D+E + +A N Q +G L I R+ ++ + ++ A
Sbjct: 270 VRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMA 329
Query: 481 PT 482
T
Sbjct: 330 ST 331
>gi|350635663|gb|EHA24024.1| hypothetical protein ASPNIDRAFT_128739 [Aspergillus niger ATCC
1015]
Length = 1595
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 119/516 (23%), Positives = 188/516 (36%), Gaps = 90/516 (17%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 491 VNAVYQRAVLRFPTDANMWEDFIMFLIDESMHGNTNTTTISTLDRATRHCPCSGSLWSQY 550
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L EE L + LRRR S + +
Sbjct: 551 LLSSEREGQSFSKIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDI 610
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 611 DVAEVGIRSAIESVQELGEKKYGRNYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 668
Query: 210 LKISGAMLEAWQSYISMEI--------ELDHINEARSIYKRCYS--------KRFTGTGS 253
+ G E W +Y E+ I+ AR Y+ KR
Sbjct: 669 VGRCGNSYEFWLTYYEWELISWSKFVQNETTIDAARRTPNPSYATAVLKQAIKRTDLDWP 728
Query: 254 EDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSV--- 310
E I ++ +Y ED D + + +R +++E + +A Q E +
Sbjct: 729 EKIMQTYIAHCEDY---EDSDELQLAILETRKAMRAVTARRERDARELAARQAEQAAVVE 785
Query: 311 -KKTGREKRKSDSNISYEQSPAKRQK------HAPQKPKKVHDKEKRQ-----VQNLAE- 357
T EKRK + PAKR + P + V + R+ V+NL
Sbjct: 786 QATTQAEKRKREEETGMNGLPAKRARAEEAEVSVPVAAEPVALRRDRENATVVVKNLPHG 845
Query: 358 -----------------------ENEGRETKQTVEEQPKKQPIKDAVPGRTKG------- 387
++G+ +E K + AV +T+
Sbjct: 846 ITEHKVRQFFRHCGTINSAKMLSSDDGKSETAIIEFNSKDE----AVVAQTRDQKIIDEH 901
Query: 388 -----FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-I 441
F T F++N A + +R F + G + IR K+ R YV F
Sbjct: 902 TIEVQFGSGSTVFVTNFPATADEQYIRDLFREHGEIIDIRFPSLKYNTHRR-FCYVQFKT 960
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
E +A + G L S+P +R+D G
Sbjct: 961 AGEAYSATQLDGATVGNGLHLVAKISDPTRRQDRQG 996
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ +D+ F G V +RI K G S+G YV F E A++ ++Q
Sbjct: 1006 VSNLDWKASEQDVEELFLRFGTVELVRIPR-KVDGGSKGFCYVVFSSKEEAEASLVMHEQ 1064
Query: 456 MFLGKKLSIARSNPKQRKDSS-------GERAPT 482
F + L + S P+ K S+ G R+P+
Sbjct: 1065 QFRSRPLHVKLSTPQGAKRSATTILSRVGTRSPS 1098
>gi|302843264|ref|XP_002953174.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
gi|300261561|gb|EFJ45773.1| hypothetical protein VOLCADRAFT_105799 [Volvox carteri f.
nagariensis]
Length = 556
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T F N++L+A D+ FFS VG V IR++ DK T KSRGLAYV+F E + +AVA
Sbjct: 80 TVFAYNLSLRADERDIFEFFSKVGRVVDIRLITDKNTKKSRGLAYVEFSKVEEVISAVAL 139
Query: 453 NKQMFLGKKLSIARSNPKQRK--DSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQS 510
+ G+ + + S ++ +++ ++ + QA +HQ SS+ +S S
Sbjct: 140 TGNILKGQPVMVKASEAEKNMAWEAAQQQKHSAQAATHQLL----------SSLASSTGS 189
Query: 511 RGRG-DSVQLKGKN 523
G+G + V L G
Sbjct: 190 GGKGTNQVALAGNG 203
>gi|299747315|ref|XP_002911154.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
gi|298407463|gb|EFI27660.1| polyadenylate-binding protein 2 [Coprinopsis cinerea okayama7#130]
Length = 194
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F + EH+ AAVA +
Sbjct: 80 YVGNVDYSATPEEIQAHFQACGVINRVTILCDKFTGHPKGYAYVEFAEPEHVDAAVAMDN 139
Query: 455 QMFLGK--KLSIARSN 468
+F G+ K++ R+N
Sbjct: 140 SLFKGRLLKVTAKRTN 155
>gi|384483165|gb|EIE75345.1| hypothetical protein RO3G_00049 [Rhizopus delemar RA 99-880]
Length = 366
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T + I+ +AT +D+R FF + G + +RI D+ TGK+RG ++DF E AAVA
Sbjct: 140 TIWCGGISFEATADDVREFFGECGEIKDVRIRIDEATGKNRGFCHIDFATQEAKDAAVAL 199
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQ 484
+ FLG+++ I ++ ++ ++SG + T++
Sbjct: 200 SGNEFLGRRIRIDGADGGKKTNTSGPASATKK 231
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
G E + + P+ P K+A + D+ T + I DL FFS VG V
Sbjct: 89 GPERRDVMPFNPRHSPPKNAKLELSAEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRD 148
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
+RI+ D TG+S+G+ YV+F D+E + +A N Q +G L I R+ ++ + ++ A
Sbjct: 149 VRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSMA 208
Query: 481 PT 482
T
Sbjct: 209 ST 210
>gi|297284668|ref|XP_001100533.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Macaca
mulatta]
Length = 322
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT--KGFTDECTAFLSNINLKAT 404
+ + VQ+ AEE EG T Q + + P+ PG K D + ++ N++ +
Sbjct: 117 PQPQGVQHQAEEEEGTMTGQLLSPEATGCPL----PGTPEEKVEADHRSVYVGNVDYGGS 172
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
E+L FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 173 AEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 232
Query: 465 ARSNP 469
+ +P
Sbjct: 233 RQCSP 237
>gi|408396974|gb|EKJ76125.1| hypothetical protein FPSE_03600 [Fusarium pseudograminearum CS3096]
Length = 207
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ ED
Sbjct: 46 KRRVAEMEEEAKKLREMQATLEQQ-------SAELADDKESIDARSIFVGNVDYSASPED 98
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA-- 465
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ MF G+ + +
Sbjct: 99 IQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKVTPK 158
Query: 466 RSN 468
R+N
Sbjct: 159 RTN 161
>gi|358368612|dbj|GAA85228.1| pre-mRNA splicing factor [Aspergillus kawachii IFO 4308]
Length = 1303
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 492 VNAVYQRAVLRFPTDANMWEDFIMFLIDESMHGNTNTTTISTLDRATRHCPCSGSLWSQY 551
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L EE L + LRRR S + +
Sbjct: 552 LLSSEREGQSFSKIADIKHKATSTGLLDAGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDI 611
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 612 DVAEVGIRSAIESVQELGEKKYGRNYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 669
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 670 VGRRGNSYEFWLTYYEWEL 688
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ +D+ F G V +RI K G S+G YV F E A++ ++Q
Sbjct: 1007 VSNLDWKASEQDVEELFLRFGTVELVRIPR-KVDGGSKGFCYVVFSSKEEAEASLVMHEQ 1065
Query: 456 MFLGKKLSIARSNPKQRKDSS-------GERAPT 482
F + L + S P+ K S+ G R+P+
Sbjct: 1066 QFRSRPLHVKLSTPQGAKRSATTILSRVGTRSPS 1099
>gi|46137511|ref|XP_390447.1| hypothetical protein FG10271.1 [Gibberella zeae PH-1]
Length = 208
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ ED
Sbjct: 47 KRRVAEMEEEAKKLREMQATLEQQ-------SAELADDKESIDARSIFVGNVDYSASPED 99
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA-- 465
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ MF G+ + +
Sbjct: 100 IQGHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESMFKGRSIKVTPK 159
Query: 466 RSN 468
R+N
Sbjct: 160 RTN 162
>gi|388580316|gb|EIM20632.1| hypothetical protein WALSEDRAFT_33249 [Wallemia sebi CBS 633.66]
Length = 727
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 186/480 (38%), Gaps = 91/480 (18%)
Query: 59 LWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLE----RSRASEEEIST 114
+W Y ++ + + +V R+ K CPW GELW + + E + +EE +
Sbjct: 40 IWESYVNWMLNNKERPDKTLNVIERSVKVCPWSGELWAALIRANEQFGHQPNKAEETYAR 99
Query: 115 VFEKSLLCAFSTFEEYLDLFLTRIDGLRRRI------LFSGEVEGVLDYSL----IRETF 164
LL S + + L ++R LR + + EV VL+ L R+T+
Sbjct: 100 AISSGLLE--SRVNDLVALIISRASYLRHTLQDADLEIVYPEVAAVLEDGLERVKGRDTY 157
Query: 165 QRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISG--AMLEAWQS 222
R E KN +A +++R+ K + W
Sbjct: 158 NRVEKIDDETAKN-----------------------AATQIFQRMTKNNAQRTNYAVWLD 194
Query: 223 YISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHS---VQK 279
+ + EI + + AR+I+K ++F E I A+ FE YG+LE + + K
Sbjct: 195 WAAFEIRSKNYDNARNIFKSATPRQFIDY-PEAIHQAYREFEDHYGSLETRQQAHFIINK 253
Query: 280 VTPRLEELR----------LFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQS 329
L E R + QQ + ++ E+ + + S TG KRK+D ++ E +
Sbjct: 254 AIGSLAERRAKEAAQAYEMYTQQQQPAVAVNEATNPIDISENTTGGVKRKADEDLDDEST 313
Query: 330 PAKRQKHAPQK---------------PKKVHD-------KEKRQVQNLAEENEGRETKQT 367
+ + A + P + D K+ V+ + + ++ T
Sbjct: 314 KRHKVQQAVETLKRDRENTTVMVSGLPSGISDVDIKLLFKDCGTVREIILKQLKGQSAAT 373
Query: 368 VEEQPK----------KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
VE + K+ I+D G++ T +++N + E+LR F G
Sbjct: 374 VEFNSRDDVLAALTKDKKRIEDIEINVVMGWS--ATLYVTNFPERTKDEELRALFEPYGT 431
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK-LSIARSNPKQRKDSS 476
+ R + +R AYV F+D A++ N ++ K L++A S+P +RK S
Sbjct: 432 IFDTR-WPSRSVKTNRRFAYVTFLDPTSAQASLELNGRIQQDKHPLTVAISDPSKRKSRS 490
>gi|409080136|gb|EKM80497.1| hypothetical protein AGABI1DRAFT_100088 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 343
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F + EH
Sbjct: 75 KNLIDSRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEH 134
Query: 446 LAAAVAKNKQMFLGKKLSIAR 466
+ AA++ + +F G+ + + R
Sbjct: 135 VDAALSMDNSLFRGRLIKVRR 155
>gi|342181601|emb|CCC91081.1| putative RNA-binding protein RBP14 [Trypanosoma congolense IL3000]
Length = 274
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
F+ + F+ ++ + T DLR FFS G + + +L DKFTG+ +G AY++F E
Sbjct: 122 FSKNASVFVGGMDPRTTESDLRVFFSGCGTIKRLTMLRDKFTGQQKGTAYIEFDTVEQAT 181
Query: 448 AAVAKNKQMFLGKKLSIA 465
+A+ KN Q GK L++A
Sbjct: 182 SAIVKNGQSLHGKPLTVA 199
>gi|451847246|gb|EMD60554.1| hypothetical protein COCSADRAFT_125527 [Cochliobolus sativus
ND90Pr]
Length = 1265
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 179/459 (38%), Gaps = 69/459 (15%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL----DKTLKVGNVVRDVYSRATKNCPWVGELWVR 97
V LYERA FPV +W DY ++L ++++ + NV+ RAT++CPW G LW
Sbjct: 474 VNALYERATLRFPVDPSIWEDYVEFLVWQDNRSVDLLNVL----ERATRHCPWSGALWSH 529
Query: 98 SLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGV 154
LL+LE E++ V S L + +E + + L LRRR F+
Sbjct: 530 RLLTLEAENKPFEDLELVKHTATGSGLLEHTDLDELIKVQLAWCGYLRRRA-FNDPRATE 588
Query: 155 LDYSLIRETFQRASDYLSE-QMKN-----TDGLLRL----YAYWAHLEQSMGKDMVSARG 204
D + + A +++ E MK TD RL +W L++ D+ AR
Sbjct: 589 DDVDVAEVGIRSALEFVREVGMKKHGREWTDPKYRLERTHIKFW--LQRG---DIDQARQ 643
Query: 205 VWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFE 264
+ E + K + W Y E+ L + R +K G A E
Sbjct: 644 IQESVAKHQEDSYDFWYRYYIFEMLLWAPHSTR-------NKENAGHQLLPPSLATAVLE 696
Query: 265 REYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEH------SVKKTGREKR 318
R L+ DH P LE Q E+ SA + SV+K +E+
Sbjct: 697 RGMKRLQTIDHP----EPLLEMYVNHCEQHETAIKVRSAAMERRRAERIISVRKE-KERA 751
Query: 319 KSDSNISYEQSPAKRQKHAPQK-----------PKKVHDKEKRQVQNLAEENEGRETKQT 367
+ + +++P A K PKK E +V N + R +
Sbjct: 752 LAAQTAALQETPESHAADASSKRKREGGDEEAVPKKSKHGETEEVTNALVNGQARVASEA 811
Query: 368 VEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDK 427
E P +D + + + + + +R+FF+D G V ++ +L ++
Sbjct: 812 PSEARSTGPKRD---------REHTSIIVKKLPPNISQTRIRQFFTDAGTVRNL-VLKEE 861
Query: 428 FTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIAR 466
K A V+F E A++K + F G ++SI R
Sbjct: 862 ---KDSLTAVVEFETPEEADYALSKEAKGFDGHEISIER 897
>gi|268553731|ref|XP_002634852.1| Hypothetical protein CBG13969 [Caenorhabditis briggsae]
Length = 545
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%)
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
G E + + P+ P K+A + D+ T + I DL FFS VG V
Sbjct: 136 GPERRDVMPFNPRHSPPKNAKLELSAEERDQRTLLIMQIARDTRPRDLEEFFSSVGAVRD 195
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+RI+ D TG+S+G+ YV+F D+E + +A N Q +G L I R+
Sbjct: 196 VRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRT 242
>gi|168053751|ref|XP_001779298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669310|gb|EDQ55900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 364 TKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
K +E PKKQP A A++ N++ T +++RRFF + S+R
Sbjct: 84 NKPLFKEPPKKQPGCLA-------------AYIGNLSYDITEKEVRRFFKGCK-IESVRF 129
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTE 483
+K TG+ RG ++DF DDE L AA+ +++ LG+ L IA S P Q+ G R ++
Sbjct: 130 AENKETGEFRGFGHIDFADDESLEAAMKLDQEPLLGRPLKIAYSVP-QKDKIMGVRGGSK 188
Query: 484 QAQSHQQTGNAG 495
A++ + G
Sbjct: 189 PAETKKGCFTCG 200
>gi|403416120|emb|CCM02820.1| predicted protein [Fibroporia radiculosa]
Length = 255
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 380 AVPGRT---KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLA 436
+VP T K D + F+ N++ AT E+++ F G ++ + IL DKFTG +G A
Sbjct: 67 SVPMETEDDKAAADSRSIFVGNVDYAATPEEIQMHFQACGVINRVTILCDKFTGHPKGFA 126
Query: 437 YVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSN 468
YV+F + EH+ AA+A + +F G+ K++ R+N
Sbjct: 127 YVEFGEAEHVDAALAMDNSLFRGRLIKVTAKRTN 160
>gi|83774819|dbj|BAE64942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1037
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
V +Y+RA+ FP +++W D+ +L GN S RAT++CP G LW +
Sbjct: 236 VNAVYQRAVLRFPTDANMWEDFVMFLIDESMHGNANTTTISTLERATRHCPCSGTLWSQY 295
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L + EE L + LRRR + L
Sbjct: 296 LLSSEREGQSFSKIADIKHKATSTGLLDVAGMEEVLKVHTAWCSYLRRRAFMPDSTDEDL 355
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 356 DVAEVGIRSAIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 413
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 414 MGRRGNSYEFWLTYYEWEL 432
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA+ D++ FS G V +R L K G S+G YV F + E AA+A + Q
Sbjct: 748 VSNVDFKASERDVQELFSKYGTVELVR-LPRKVDGGSKGFGYVVFSNKEEATAALAMDGQ 806
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQ-SHQQTGNAGTSASKESS 503
+ + L + S P+ K S A T +Q Q+ A + SKES+
Sbjct: 807 EYRSRTLHVKISAPQSTKRS----ATTIVSQVGKSQSPAAVVNGSKESA 851
>gi|426198097|gb|EKV48023.1| hypothetical protein AGABI2DRAFT_68353, partial [Agaricus bisporus
var. bisporus H97]
Length = 332
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F + EH
Sbjct: 47 KNLIDSRSVYVGNVDYGATPEEIQGHFQSCGTINRVTILCDKFTGHPKGYAYVEFAESEH 106
Query: 446 LAAAVAKNKQMFLGKKLSIAR 466
+ AA++ + +F G+ + + R
Sbjct: 107 VDAALSMDNSLFRGRLIKVRR 127
>gi|145345544|ref|XP_001417267.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577494|gb|ABO95560.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 727
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 29/187 (15%)
Query: 377 IKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLA 436
+K P R D TAF+ N++ T +L FF+ G S RI+ DK TG+SRG+A
Sbjct: 566 VKTLFPTR-----DTQTAFVKNLSWDVTDAELMEFFT---GAVSCRIVKDKATGRSRGIA 617
Query: 437 YVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGT 496
YVDF ++ L AA+ ++ + G+ + IA+S P G S G
Sbjct: 618 YVDFGEEAALNAAIMRSGEALKGRLVDIAKSRPPGDDGPDGRGGRGGGRGSRGGGRGGGR 677
Query: 497 SASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPAIKPKTEEGEDLKPKSNDE 556
+A +S +PR + +T+ GE + K+N +
Sbjct: 678 AAPSVASGRGRGGLG--------------LMPRAI-------TVTRTDNGEGAQAKTNAD 716
Query: 557 FRKMFIK 563
FR MF+K
Sbjct: 717 FRAMFVK 723
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 19 DSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYL-DKTLKVGNVV 77
D++ + Y Y+ +E +SG P RV LYERA++ P ++LW DY Y+ + K
Sbjct: 222 DAKLLRAYATYIDFEMASGSPDRVVHLYERALSSLPYVAELWRDYVLYVWSISFKSAEAA 281
Query: 78 -RDVYSRATKNCPWVGELWVRSLLSLERS 105
R + RA + CP LW +S+L LE S
Sbjct: 282 SRTLMLRAVRMCP-SSVLW-KSVLELESS 308
>gi|302836806|ref|XP_002949963.1| hypothetical protein VOLCADRAFT_90315 [Volvox carteri f.
nagariensis]
gi|300264872|gb|EFJ49066.1| hypothetical protein VOLCADRAFT_90315 [Volvox carteri f.
nagariensis]
Length = 658
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSS-IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
A+ NI+ +A E+L++ FS G V + IR+ DK TG+SRG A+V F +DE + AVA
Sbjct: 577 AYCGNISFEAGAEELQQLFSRAGAVPTKIRLHSDKATGRSRGFAHVHFANDEDVDKAVAL 636
Query: 453 NKQMFLGKKLSIARSNPK 470
+ F G+K+ ++ + PK
Sbjct: 637 DGTSFHGRKIRVSYAQPK 654
>gi|302697041|ref|XP_003038199.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
gi|300111896|gb|EFJ03297.1| hypothetical protein SCHCODRAFT_80477 [Schizophyllum commune H4-8]
Length = 344
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT ED++ F G ++ + IL DKFTG +G AYV+F + EH
Sbjct: 44 KTAADNRSIYVGNVDYSATPEDIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEH 103
Query: 446 LAAAVAKNKQMFLGK 460
+ AAV + +F G+
Sbjct: 104 VDAAVTMDNSLFKGR 118
>gi|390362827|ref|XP_799120.2| PREDICTED: polyadenylate-binding protein 2-like [Strongylocentrotus
purpuratus]
Length = 249
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPK--KQPIKDAVPGRT---KGFTDECTAFLSNINLK 402
K +V+ + EE E +E + V++Q P A P + KG D + ++ N++
Sbjct: 53 KARVREMEEEAEKLKEMQNEVDKQMNLSSPPPAQAAPHLSLEEKGEVDARSVYVGNVDYS 112
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
AT E+L F G ++ + IL DKFTG +G AYV+F++ + + A N +F G+++
Sbjct: 113 ATAEELESHFHGCGPINRVTILCDKFTGHPKGYAYVEFVEKDSIDTACTLNLSLFKGRQI 172
Query: 463 SIARSNPKQRKDSSGERAP 481
+ + S+ +R P
Sbjct: 173 RVNAKRTNRPGISTTDRPP 191
>gi|25148310|ref|NP_741301.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
gi|373220574|emb|CCD74061.1| Protein Y55F3AM.3, isoform c [Caenorhabditis elegans]
Length = 435
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%)
Query: 372 PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK 431
P+ P K+A T D+ T + I DL FFS VG V +RI+ D TG+
Sbjct: 5 PRHSPPKNAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGR 64
Query: 432 SRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPT 482
S+G+ YV+F D+E + +A N Q +G L I R+ ++ + ++ A T
Sbjct: 65 SKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQRTCAERNRAANSSVAST 115
>gi|406860694|gb|EKD13751.1| polyadenylate-binding protein 2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 194
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ AT ED++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 63 DSRSIFVGNVDYSATPEDIQAHFESCGSINRVTILLDKFTGHPKGYAYVEFTEPTLVAQA 122
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N MF G+ L + R+N
Sbjct: 123 LVLNDSMFHGRNLKVVPKRTN 143
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
TAF N+NLKA D+ + FS VG V I+++ DK T +S+G AY++F E + AAVA
Sbjct: 7 TAFAYNLNLKADERDIYQLFSKVGKVVDIKLITDKTTKRSKGFAYIEFSKVEEVIAAVAL 66
Query: 453 NKQMFLGKKLSIARS 467
+F+G+ + + S
Sbjct: 67 TGTVFMGQAIMVKSS 81
>gi|409050235|gb|EKM59712.1| hypothetical protein PHACADRAFT_250387 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDA-VPGRT---KGFTDECTAFLSNINLKATYEDLRRFF 412
E N+ RE + E Q + DA VP T + D+ + F+ N++ +T E++++ F
Sbjct: 43 EANKLRELQAAAENQEHEGGASDASVPMETEDERAQADQRSIFIGNVDYASTPEEIQQHF 102
Query: 413 SDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSN 468
G ++ + IL DKFTG +G AYV+F + E + A+A + +F G+ K++ R+N
Sbjct: 103 QACGTINRVTILCDKFTGHPKGFAYVEFAEPESIDTALAMDNSLFRGRLIKVTSKRTN 160
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N++ K T E+ R F G ++S I HD TGKSRG +V+F+ E AAAV + N
Sbjct: 239 YVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELN 298
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G+KL + R+ K ++
Sbjct: 299 DKEFKGQKLYVGRAQKKHERE 319
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 87/199 (43%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-DKTLK--VGNVVRDVYSRATKNCPWVGELWVRS 98
V LY+RA+ FP +LW ++ +L D++L RAT++CP G LW +
Sbjct: 485 VSALYQRALLRFPTDPNLWEEFVMFLIDESLHGHADTTTLSTLDRATRHCPSSGTLWSQY 544
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER S +I+ + K+ L EE L + LRRR S + L
Sbjct: 545 LLSSEREGQSFAKIAGIKHKATSTGLLDVGGMEEVLKVHTAWCSYLRRRAFLSDSTDEDL 604
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 605 DVAEVGIRSAIESVQELGEKKYGRSYQGDPLFRLERIYIRYLSESGSWD--SARETFKGL 662
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 663 VGRLGHSYEFWLTYYEWEL 681
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KA +DL+ FS G V +RI K G S+G YV F E AA+A ++
Sbjct: 995 VSNVDWKANEDDLKELFSKYGHVELVRIPR-KVDGGSKGFGYVVFSTKEEAQAALALHEH 1053
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
F + L + S P+ K S A T +Q + +G + S ET +R R
Sbjct: 1054 EFRSRPLHVKVSAPQGAKRS----ATTIVSQVGKSMSPSGDVNGTKESGETDASARER 1107
>gi|440800318|gb|ELR21357.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 195
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KRQVQ + EE E E ++ VE Q P P ++ D + ++ N++ T ++
Sbjct: 40 KRQVQQMQEEAEKLEEIQKEVEAQMGTSP----SPANSQSI-DARSVYVGNVDYAVTPQE 94
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
L+ F G ++ I IL DKFTG +G AY++F +++ + AV N + G+++ +
Sbjct: 95 LQAHFQSCGPINRITILCDKFTGHPKGYAYIEFSEEDAVGNAVLLNDTVVHGRQIKV--- 151
Query: 468 NPK 470
NPK
Sbjct: 152 NPK 154
>gi|171677925|ref|XP_001903913.1| hypothetical protein [Podospora anserina S mat+]
gi|170937031|emb|CAP61689.1| unnamed protein product [Podospora anserina S mat+]
Length = 209
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+L+ F D G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 70 DNRSVFVGNVDYSASPEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQA 129
Query: 450 VAKNKQMFLGKKLSI 464
+ N +F G+ + +
Sbjct: 130 LVLNDSLFKGRNIKV 144
>gi|299469902|emb|CBN76756.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 774
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 391 ECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV 450
+ T ++ N++ T +D+R FF++ G ++S+RI DK TGK RG+A+V F + A+
Sbjct: 315 DSTVYVGNLDPSVTEDDIREFFAECGAIASVRIPQDKETGKMRGIAFVAFAKHSGVLQAL 374
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSA 498
+ G+ + I R++ + +D+ G AQ +Q NA +SA
Sbjct: 375 TLHMDDLKGQSVKIRRADTAKPRDNGG-------AQHKKQVPNATSSA 415
>gi|427796401|gb|JAA63652.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 349 KRQVQNLAEENEGRETKQT-VEEQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKAT 404
K +V+ + EE E + Q+ VE+Q P G T K D + ++ N++ AT
Sbjct: 74 KARVREMEEEAEKLKQMQSEVEKQMSISPAGGGSLGLTLEEKIEVDARSIYVGNVDYGAT 133
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
E+L + F G ++ + IL DKF+G +G AY++F D + + A+A ++ +F G+++ +
Sbjct: 134 AEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQIKV 193
Query: 465 ARSNPKQRKDSSGERAP 481
+ S+ R P
Sbjct: 194 MTKRTNRPGISTTNRPP 210
>gi|410908757|ref|XP_003967857.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Takifugu
rubripes]
Length = 284
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E +
Sbjct: 95 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERA-PTEQAQSHQQTGNAGTSASKESSIETS 507
A+A ++ +F G+++ + + S+ +R P + +S G+ +S+
Sbjct: 155 AMALDESLFRGRQIKVVAKRTNRPGISTTDRGFPRARFRS-----RGGSFSSRARYYSGY 209
Query: 508 KQSRGRGDSVQLKGKNTFAVPRNVRP 533
RGRG + + + + P V P
Sbjct: 210 TPPRGRGRAFRFQDQWRLTTPPQVAP 235
>gi|320582005|gb|EFW96224.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Ogataea parapolymorpha DL-1]
Length = 156
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 370 EQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFT 429
EQP +QP + D + +L N++ A DL+ D G ++ I IL+DK T
Sbjct: 5 EQPPQQPRLAPNQPSNQQEIDSRSVYLGNVDYSALPGDLKELLDDCGVINRITILYDKHT 64
Query: 430 GKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
GK RG A+V+F E AVA N F G+ L++
Sbjct: 65 GKPRGYAFVEFETHEGAQKAVAMNGTEFRGRTLTV 99
>gi|169616941|ref|XP_001801885.1| hypothetical protein SNOG_11646 [Phaeosphaeria nodorum SN15]
gi|160703294|gb|EAT80690.2| hypothetical protein SNOG_11646 [Phaeosphaeria nodorum SN15]
Length = 1254
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 189/494 (38%), Gaps = 108/494 (21%)
Query: 29 YLKYEQSSGDPGRVQL---LYERAITDFPVSSDLWLDYTQYL----DKTLKVGNVVRDVY 81
YLK+E+ + L LYERA FPV LW D+ ++L D+++ + NV+
Sbjct: 446 YLKWEKKTMGVYSFHLVNALYERATLRFPVDPSLWEDHVEFLIWQQDRSVDLLNVLE--- 502
Query: 82 SRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRI 138
RAT++CPW G LW +L+LE + E++ V S L + EE + +
Sbjct: 503 -RATRHCPWSGALWSHRILTLEAENKAFEDLEHVKHTATGSGLLEHADLEELIKVQTAWC 561
Query: 139 DGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKD 198
LRRR F D + + A +++ E G+ + G+D
Sbjct: 562 GYLRRRA-FDDPRATEDDVDIAEVGIRSALEFVREV-----GI-----------KKHGRD 604
Query: 199 MVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICH 258
+ ER+ ++ ++ +I+EAR I + +K+ S D +
Sbjct: 605 WSDPKWRLERI-------------HMKFWLQRGNIDEARQILESLAAKQ---GDSYDFWY 648
Query: 259 AWLRFE----REYGTLEDFDHSVQKVTPRLEELRLFRSQQE--SKSLPE--------SAD 304
W FE ++ T + Q +TP L R + + LPE +
Sbjct: 649 RWYIFEMVFWSQHATRNKANAGQQLLTPSQATAVLERGMERLTTLDLPEHLVEMYITHCE 708
Query: 305 QKEHSVK--KTGREKRKSDSNISYE-----------------------QSPAKRQKHAPQ 339
Q E +K E+R++D IS +S AKR++
Sbjct: 709 QHESVIKVRSAAIERRRADRTISIRREKEQASAAAIASQQATPPSELAESSAKRKRDGTS 768
Query: 340 KPKKVHDKEKRQVQNL-----AEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA 394
+ + V K+ + L E R+T + E +D + T
Sbjct: 769 QEEVVTTKKSKMSSALETSGAVVNGEPRDTSEAPSEAQSSGQKRD---------REHTTI 819
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRIL--HDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ + T +R+FF++VG V ++ + H T A V+F + A+ K
Sbjct: 820 IVRKLPADTTQTKIRQFFTEVGTVRNLVMKEEHGALT------AVVEFESPDEAEYALTK 873
Query: 453 NKQMFLGKKLSIAR 466
+ F G ++SI R
Sbjct: 874 EAKGFHGHEISIER 887
>gi|348544131|ref|XP_003459535.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Oreochromis niloticus]
Length = 284
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E +
Sbjct: 95 ADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
A+A ++ +F G+++ + + S+ +R +A+ + GN A S
Sbjct: 155 AMALDESLFRGRQIKVGAKRTNRPGISTTDRG-FPRARFRSRGGNFSLRARYYSGY---T 210
Query: 509 QSRGRGDSVQLKGKNTFAVPRNVRP 533
RGRG + + + + P V P
Sbjct: 211 PPRGRGRAFRFQDQWRLTTPPQVAP 235
>gi|389747069|gb|EIM88248.1| hypothetical protein STEHIDRAFT_155598 [Stereum hirsutum FP-91666
SS1]
Length = 457
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT ED++ F G ++ + IL DKFTG +G AYV+F + EH
Sbjct: 77 KAQADSRSIYVGNVDYAATPEDIQAHFQAAGTINRVTILCDKFTGHPKGYAYVEFAEPEH 136
Query: 446 LAAAVAKNKQMFLGKKL 462
+ AA+A + +F G+ +
Sbjct: 137 VDAALALDNSLFHGRLI 153
>gi|301116187|ref|XP_002905822.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109122|gb|EEY67174.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 957
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 37/285 (12%)
Query: 21 EKFQQYMIYLKYEQS---SGDPGRVQL---LYERAITDFPVSSDLWLDYTQYL---DKTL 71
E + QY+ ++K+ + + + R QL LYERA+ +S LW Y +YL D T
Sbjct: 319 EPWLQYLNFVKHRVAPLMASEAERKQLVVCLYERAVASLCLSPALWASYLEYLEPDDVTS 378
Query: 72 KVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC-AFSTFEEY 130
K + + + RA +N P+ W L+ +ER A+ EIS +LL ++Y
Sbjct: 379 KNEDKLA-IARRAVRNVPFDSSAWTELLVEIERQGAT-MEISQFISTNLLVRERPPMDQY 436
Query: 131 --LDLFLTRIDGLRR--RILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLY 185
L++ L D +RR I F G++E ++ ++ F + + LS + +G LRL
Sbjct: 437 HLLNVLLVWCDAIRRYAAIDFDGDLENTVE-QVVGAVFSKCQEVLSRMFPDYLEGKLRLA 495
Query: 186 -----AYWAHL--------EQSMGKDMVSARGVWERLLKIS-GAMLEAWQSYISMEIELD 231
YW L + ++ + +W + + S G W +Y+ ++
Sbjct: 496 DYQAKCYWTLLPPTGPPRPKPAIEMKVTKVTELWNKTVSSSLGDQTATWMAYLDALRRMN 555
Query: 232 HINEARSIYKRCYS---KRFTGTGSEDICHAWLRFEREYGTLEDF 273
+ SI K ++ +R T + AWL FERE G L +
Sbjct: 556 -VFSVSSIRKMVFNEAVQRVKDTPMV-LAEAWLVFERENGDLMSY 598
>gi|355710480|gb|EHH31944.1| hypothetical protein EGK_13114 [Macaca mulatta]
Length = 241
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT--KGFTDECTAFLSNINLKAT 404
+ + VQ+ AEE EG Q + + P+ PG K D + ++ N++ +
Sbjct: 117 PQPQGVQHQAEEEEGTMAGQLLSPEATGCPL----PGTPEEKVEADHRSVYVGNVDYGGS 172
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
E+L FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 173 AEELEAHFSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 232
Query: 465 ARSNP 469
+ +P
Sbjct: 233 RQCSP 237
>gi|449679958|ref|XP_002163300.2| PREDICTED: polyadenylate-binding protein 2-like [Hydra
magnipapillata]
Length = 224
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQP---IKDAVPGRTKGFTDECTAFLSNINLKATY 405
K +V+ + EE E + Q E P + ++PG + D + ++ N++ AT
Sbjct: 45 KARVKEMEEEAEKLKEMQKEAESSLMSPQHAVPSSLPGEDQASIDCRSVYVGNVDYSATA 104
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+L + F G V+ + IL DKF+G +G AYV+F D + + AV + +F G+++ +
Sbjct: 105 SELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFGDKDSVENAVQLSDSLFKGRQIKV 163
>gi|302828556|ref|XP_002945845.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
gi|300268660|gb|EFJ52840.1| hypothetical protein VOLCADRAFT_54847 [Volvox carteri f.
nagariensis]
Length = 220
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 385 TKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE 444
T G TD F+ N++ KAT +D+R+ F D G + ++R+ D TG+SRG A+V+F D
Sbjct: 54 TNGGTDSTRVFVGNLSWKATEDDVRKHFKDCGKIVNVRMGVDPETGRSRGFAHVEFGDAA 113
Query: 445 HLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGER 479
AV+K G+ + + + P+ + G R
Sbjct: 114 QAKKAVSKAGTEIDGRAIKVEVTQPRPQSFGGGGR 148
>gi|346969940|gb|EGY13392.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 205
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 323 NISYEQSPAKRQKHAPQKPKKVHDKE-----KRQVQNLAEENEG-RETKQTVEEQPKKQP 376
++ + +PA Q+ A HD+E KR+V + EE RE + T++ Q Q
Sbjct: 16 DVEQQDTPADNQQAAE---DDGHDEEEISAMKRRVAEMEEEAAKLREMQATLDTQ--TQD 70
Query: 377 IKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLA 436
I D K D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G A
Sbjct: 71 ISD-----NKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYA 125
Query: 437 YVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSN 468
YV+F + +A A+ N+ +F G+ + + R+N
Sbjct: 126 YVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTN 159
>gi|342887594|gb|EGU87076.1| hypothetical protein FOXB_02470 [Fusarium oxysporum Fo5176]
Length = 205
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ ED
Sbjct: 45 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESIDARSIFVGNVDYSASPED 97
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 98 IQSHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 154
>gi|336373392|gb|EGO01730.1| hypothetical protein SERLA73DRAFT_70899 [Serpula lacrymans var.
lacrymans S7.3]
Length = 346
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKA 403
K+ R++Q AE G + ++ VP T K +D + F+ N++ A
Sbjct: 45 KKLRELQAAAETANGGTSTES----------DSGVPMETEEEKALSDSRSVFVGNVDYGA 94
Query: 404 TYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
T E+++ F G ++ + IL DKFTG +G AYV+F + + + AA+A + +F G+ +
Sbjct: 95 TPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAALAMDNSLFRGRLIK 154
Query: 464 IA 465
+
Sbjct: 155 VG 156
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T F N+ LKA DL FFS G + ++I+ D+ T KS+G AY+++ + + A+A
Sbjct: 127 TVFAYNLPLKAEERDLFEFFSKAGPIEDVKIIMDRNTRKSKGFAYIEYTNKADIVTAMAL 186
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQT--GNAGTSASK 500
Q+ +G+ + + S + K+ + E A + A Q + GNAGT K
Sbjct: 187 TGQILMGQAVMVKSS--EAEKNLAWEAAQAQNASMLQMSTIGNAGTGPCK 234
>gi|47086087|ref|NP_998424.1| polyadenylate-binding protein nuclear 1 isoform 1 [Danio rerio]
gi|46250394|gb|AAH68437.1| Zgc:85979 [Danio rerio]
gi|50925993|gb|AAH79522.1| Pabpn1 protein [Danio rerio]
gi|182889100|gb|AAI64644.1| Pabpn1 protein [Danio rerio]
Length = 284
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKFTG +G AY++F D E +
Sbjct: 95 ADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
A+A ++ +F G+++ + + S+ +R +A+ + GN +S ++ S T
Sbjct: 155 AMALDESLFRGRQIKVGAKRTNRPGISTTDRG-FPRARFRSRGGNF-SSRARYYSGYTPP 212
Query: 509 QSRGR 513
+ RGR
Sbjct: 213 RGRGR 217
>gi|396493888|ref|XP_003844180.1| similar to pre-mRNA splicing factor (Prp24) [Leptosphaeria maculans
JN3]
gi|312220760|emb|CBY00701.1| similar to pre-mRNA splicing factor (Prp24) [Leptosphaeria maculans
JN3]
Length = 1276
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 29 YLKYEQSSGDPGRVQL---LYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRAT 85
YLK+E+ + L LYERA FPV +W D+ ++L + +V RAT
Sbjct: 458 YLKWEKKTMGVYSFHLVNALYERATLRFPVDPAIWEDHVEFLIWQNNPSVDLLNVLERAT 517
Query: 86 KNCPWVGELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLR 142
++CPW G LW LL+LE + E++ V S L + +E + + L LR
Sbjct: 518 RHCPWSGSLWSHRLLTLELENKAFEDLERVKHTATGSGLLEHTALDELISVQLAWCGYLR 577
Query: 143 RR 144
RR
Sbjct: 578 RR 579
>gi|427796791|gb|JAA63847.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 249
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Query: 349 KRQVQNLAEENEGRETKQT-VEEQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKAT 404
K +V+ + EE E + Q+ VE+Q P G T K D + ++ N++ AT
Sbjct: 74 KARVREMEEEAEKLKQMQSEVEKQMSISPAGGGSLGLTLEEKIEVDARSIYVGNVDYGAT 133
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
E+L + F G ++ + IL DKF+G +G AY++F D + + A+A ++ +F G+++ +
Sbjct: 134 AEELEQHFHGCGSINRVTILCDKFSGHPKGFAYIEFTDKDSIQTAMALDESLFRGRQIKV 193
>gi|403359392|gb|EJY79355.1| Splicing factor, putative [Oxytricha trifallax]
Length = 508
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFS---DVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHL 446
D+CT ++ I L A D+ FFS VG + +R++ D+ +GKS+G+AYV+F E +
Sbjct: 140 DDCTVLVNRIALHANERDMYNFFSKEKGVGKIRDVRLIRDQRSGKSKGIAYVEFYTPESV 199
Query: 447 AAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQ 484
A+A + F+G+ + I S ++ + ++ + EQ
Sbjct: 200 LLAMALSGTQFMGQTIMIQASQAEKNRAAAASKYKKEQ 237
>gi|154310272|ref|XP_001554468.1| hypothetical protein BC1G_07056 [Botryotinia fuckeliana B05.10]
gi|347836575|emb|CCD51147.1| hypothetical protein [Botryotinia fuckeliana]
Length = 194
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ ED++ F G ++ + IL DKFTG +G AYV+F++ +A A
Sbjct: 64 DSRSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 124 LVLNESVFKGRNLKVVPKRTN 144
>gi|291190353|ref|NP_001167243.1| Polyadenylate-binding protein 2 [Salmo salar]
gi|223648842|gb|ACN11179.1| Polyadenylate-binding protein 2 [Salmo salar]
Length = 237
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKFTG +G AY++F D E +
Sbjct: 99 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRT 158
Query: 449 AVAKNKQMFLGK--KLSIARSN 468
A+A ++ +F G+ K+ + R+N
Sbjct: 159 AMALDESLFRGRQIKVGVKRTN 180
>gi|375149693|ref|YP_005012134.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361063739|gb|AEW02731.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 112
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++SN++ T +DL FF++ G VSS R++ DKFTGKSRG +V+ +DE A+ + +
Sbjct: 4 YVSNLSFNVTDDDLEGFFAEYGEVSSARVITDKFTGKSRGFGFVEMPNDEAAKKAITELD 63
Query: 454 KQMFLGKKLSIARSNPKQRKDS 475
G+++ +A + P++ + S
Sbjct: 64 GGRVEGREIKVAEARPREERSS 85
>gi|321461275|gb|EFX72309.1| hypothetical protein DAPPUDRAFT_201152 [Daphnia pulex]
Length = 733
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 113/287 (39%), Gaps = 59/287 (20%)
Query: 46 YERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGE---------LWV 96
YE+ I + P + D W DY + ++ V VVRD Y RA N P V E LW+
Sbjct: 320 YEQEIKENPSNYDAWFDYLRLMESDADV-EVVRDTYERAIANIPLVAEKSFWRRYIYLWI 378
Query: 97 RSLLSLERSRASEEEISTVFEKSLLC------AFSTFEEYLDLFLTRIDGLR--RRILFS 148
L E E+ V++ L F+ F R L+ R+IL +
Sbjct: 379 NYALFEELEAEDYEKTRQVYDSCLKLIPHRNFTFAKMWLLYAHFEVRQKNLQLARKILGT 438
Query: 149 G--------EVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMV 200
G +D + F R + ++N + +A LE +G D+
Sbjct: 439 AIGKCPKNKLFRGYIDLEIQLREFDRCRTLYEKFLQNGPENCTTWMKFAELETLLG-DVD 497
Query: 201 SARGVWERLLKISGAMLEA----WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDI 256
ARG++E L I +L+ W++YI EIE + ++ARS+Y+R +
Sbjct: 498 RARGIYE--LAIKQPLLDMPEILWKAYIDFEIEQEENDKARSLYERLLER-------TQH 548
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESA 303
W+ F + EL L SQQE SLP +A
Sbjct: 549 VKVWMSFAQ-------------------FELTLAASQQEDPSLPVAA 576
>gi|336386223|gb|EGO27369.1| hypothetical protein SERLADRAFT_446592 [Serpula lacrymans var.
lacrymans S7.9]
Length = 338
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKA 403
K+ R++Q AE G + ++ VP T K +D + F+ N++ A
Sbjct: 45 KKLRELQAAAETANGGTSTES----------DSGVPMETEEEKALSDSRSVFVGNVDYGA 94
Query: 404 TYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
T E+++ F G ++ + IL DKFTG +G AYV+F + + + AA+A + +F G+ +
Sbjct: 95 TPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPDFIDAALAMDNSLFRGRLIK 154
Query: 464 IARSNPKQ 471
+ S P++
Sbjct: 155 TS-STPRR 161
>gi|302421908|ref|XP_003008784.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
gi|261351930|gb|EEY14358.1| polyadenylate-binding protein [Verticillium albo-atrum VaMs.102]
Length = 205
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 18/154 (11%)
Query: 323 NISYEQSPAKRQKHAPQKPKKVHDKE-----KRQVQNLAEENEG-RETKQTVEEQPKKQP 376
++ + +PA Q+ A HD+E KR+V + EE RE + T++ Q Q
Sbjct: 16 DVEQQDTPADNQQAAE---DDGHDEEEISAMKRRVAEMEEEAAKLREMQATLDTQ--TQD 70
Query: 377 IKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLA 436
+ D K D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G A
Sbjct: 71 VSD-----NKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYA 125
Query: 437 YVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSN 468
YV+F + +A A+ N+ +F G+ + + R+N
Sbjct: 126 YVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTN 159
>gi|242786497|ref|XP_002480817.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720964|gb|EED20383.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1268
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Query: 38 DPGRVQLLYERAITDFPVSSDLWLDYTQYL-DKTLKVGN----VVRDVYSRATKNCPWVG 92
+P + LY+RA+ FP +W D +L + V V RAT++CPW G
Sbjct: 467 NPHLINALYQRALLRFPTDVAMWEDCVMFLIQPPVPVPRNEFAPVLPTIERATRHCPWSG 526
Query: 93 ELWVRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSG 149
LW + LL ER S ++I + ++ L EE + + LRRR
Sbjct: 527 SLWSQCLLVAEREGLSFDQIVELKHRATSTGLLDAGGLEEVIKVHSMWCSYLRRRAFLPD 586
Query: 150 EVEGVLDYS--LIRETFQRASDYLSEQMKNT---DGLLRL-YAYWAHLEQSMGKDMVSAR 203
++ LD + IR +R + + D RL Y +L +S D SAR
Sbjct: 587 AIDEDLDVAEVGIRSAIERVQELGENKFGKAYQGDPYFRLERIYTRYLSESGSWD--SAR 644
Query: 204 GVWERLLKISGAMLEAWQSYISMEI 228
++ L+ G E W Y + EI
Sbjct: 645 EYYKGLIATRGNSYEFWLDYYNWEI 669
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+ A DL+ FS G + ++RI K G+ RG ++ F E AA+A +KQ
Sbjct: 1000 VSNIHFDARENDLKELFSRYGTIETVRI-PSKVNGEHRGFGFIVFSKKEEATAALAMHKQ 1058
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIET 506
F G+ L + S P K ++ P +++S + T + G A+ + + T
Sbjct: 1059 EFRGRPLQVKVSTPAPVKRAATVITPKARSESAEPTNSEGQRAADDRAART 1109
>gi|212543387|ref|XP_002151848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
gi|210066755|gb|EEA20848.1| pre-mRNA splicing factor (Prp24), putative [Talaromyces marneffei
ATCC 18224]
Length = 1275
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 28/249 (11%)
Query: 4 ARAHLEEQISRQDLSDSEKFQQYMIYLKY---------EQSSGDPGRVQLLYERAITDFP 54
AR E ++ R L ++ ++ +Y +Y ++ P + LY+RA+ FP
Sbjct: 426 ARQDFEHKVQRA-LESKDRNLEWAVYSEYIEWELLQDPRKNMYSPHLINALYQRALLRFP 484
Query: 55 VSSDLWLDYTQYLDKTL------KVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRAS 108
+W D +L + ++ V+ + RAT++CPW G LW + LL ER S
Sbjct: 485 TDVPMWEDCVMFLIQPPVPVPRNEIAPVLPTI-ERATRHCPWSGSLWSQCLLVAEREGLS 543
Query: 109 EEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYS--LIRET 163
++I + ++ L EE + + LRRR + LD + IR
Sbjct: 544 FDQIVELKHRATSTGLLDAGGLEEVIKVHSMWCSYLRRRAFLPDATDEDLDVAEVGIRSA 603
Query: 164 FQRASDYLSEQMKNT---DGLLRL-YAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEA 219
+R + + + D RL Y +L +S D SAR ++ L+ G E
Sbjct: 604 IERVQELGENKYGKSYQGDPYFRLERIYTRYLSESGSWD--SAREYYKGLIATRGNSYEF 661
Query: 220 WQSYISMEI 228
W Y + EI
Sbjct: 662 WLDYYNWEI 670
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SNI+ A DL+ FS G + ++RI K G+ RG ++ F E AA+A +KQ
Sbjct: 1002 ISNIHFDARENDLKELFSKYGTIETVRI-PSKVNGEHRGFGFIVFSKKEEATAALAMHKQ 1060
Query: 456 MFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG 492
F G+ L + S P K ++ P +++S + G
Sbjct: 1061 DFRGRPLQVKVSTPVPVKRAATIITPKARSESAEPKG 1097
>gi|198438310|ref|XP_002131910.1| PREDICTED: similar to Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)-binding protein II)
(PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) [Ciona intestinalis]
Length = 225
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ AT E+L + F G ++ + IL D+++G +G AYV+F D E + A
Sbjct: 99 DSRSVFVGNVDYGATAEELEQHFHGTGSINRVTILCDRYSGHPKGFAYVEFADTESVETA 158
Query: 450 VAKNKQMFLGKKLSIARSNPKQ 471
A + +F G++L + NPK+
Sbjct: 159 TALDGTLFRGRQLQV---NPKR 177
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N++ + T E+ R F G ++S I HD TGKSRG +V+F+ E AAAV + N
Sbjct: 239 YVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAAVEELN 298
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G+KL + R+ K ++
Sbjct: 299 DKEFKGQKLYVGRAQKKHERE 319
>gi|405978177|gb|EKC42587.1| Polyadenylate-binding protein 2 [Crassostrea gigas]
Length = 244
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L + F G V+ + IL DKFTG +G AYV+F D + + A
Sbjct: 99 DARSVYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFTGHPKGFAYVEFADKDSVTTA 158
Query: 450 VAKNKQMFLGK--KLSIARSN 468
A ++ +F G+ K+S R+N
Sbjct: 159 QALDESLFRGRQIKVSAKRTN 179
>gi|388852116|emb|CCF54292.1| related to poly(a) binding protein II [Ustilago hordei]
Length = 205
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L++ F G ++ + IL DKFTG +G AYV+F D +A A
Sbjct: 94 DSRSIYVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANA 153
Query: 450 VAKNKQMFLGK--KLSIARSN 468
+ N+ +F G+ K++ R+N
Sbjct: 154 MVLNESLFRGRLIKITAKRTN 174
>gi|312072775|ref|XP_003139219.1| pabpn1-prov protein [Loa loa]
gi|307765621|gb|EFO24855.1| pabpn1-prov protein [Loa loa]
Length = 214
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ +T E+L F G V+ + IL DKFTG +G AY++F D E + A
Sbjct: 89 DSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTA 148
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+A ++ +F G+++ + + S+ R P
Sbjct: 149 LALDESLFRGRQIKVCAKRTNRPGVSTTNRPP 180
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
+KE + ++NL E E ++ + E P P+ K D + F+ N++ A
Sbjct: 23 EKEAQLIRNLHTEVE-KQMSTVLNESPTPPPLTSD----EKVEADSRSVFVGNVDYGAAA 77
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
E+L F G ++ I IL D+++G+ +G AY++F D E A++A +F G+++ +
Sbjct: 78 EELEAHFHGCGAINRITILCDRYSGRPKGFAYIEFADKESARASLAMTDTLFRGRQIKVV 137
>gi|157311739|ref|NP_001098602.1| polyadenylate-binding protein nuclear 1 isoform 2 [Danio rerio]
gi|166158019|ref|NP_001107419.1| uncharacterized protein LOC100135259 [Xenopus (Silurana)
tropicalis]
gi|156914711|gb|AAI52624.1| Pabpn1 protein [Danio rerio]
gi|158253845|gb|AAI54029.1| Poly(A) binding protein, nuclear 1 [Danio rerio]
gi|163915712|gb|AAI57544.1| LOC100135259 protein [Xenopus (Silurana) tropicalis]
Length = 232
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKFTG +G AY++F D E +
Sbjct: 95 ADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSIA 465
A+A ++ +F G+++ +
Sbjct: 155 AMALDESLFRGRQIKVG 171
>gi|402590193|gb|EJW84124.1| hypothetical protein WUBG_04965 [Wuchereria bancrofti]
Length = 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ +T E+L F G V+ + IL DKFTG +G AY++F D E + A
Sbjct: 89 DSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTA 148
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+A ++ +F G+++ + + S+ R P
Sbjct: 149 LALDESLFRGRQIKVCAKRTNRPGVSTTNRPP 180
>gi|451997821|gb|EMD90286.1| hypothetical protein COCHEDRAFT_1195517 [Cochliobolus
heterostrophus C5]
Length = 1269
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL----DKTLKVGNVVRDVYSRATKNCPWVGELWVR 97
V LYERA FPV +W D+ ++L ++++ + NV+ RAT++CPW G LW
Sbjct: 478 VNALYERATLRFPVDPSIWEDHVEFLVWQDNRSVDLLNVL----ERATRHCPWSGALWSH 533
Query: 98 SLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRIDGLRRR 144
LL+LE E++ V S L + +E + + L LRRR
Sbjct: 534 RLLTLEAENKPFEDLELVKHTATGSGLLEHTDLDELIKVQLAWCGYLRRR 583
>gi|361128100|gb|EHL00053.1| putative E3 ubiquitin-protein ligase hulA [Glarea lozoyensis 74030]
Length = 1411
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE RE + T+E+Q Q + D K D + F+ N++ +A+ E+
Sbjct: 653 KRRVAEMEEEAAKLREMQATMEQQ--HQDLDDK-----KEDIDSRSIFVGNVDYEASPEE 705
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
++ F+ G ++ + IL DKFTG +G AYV+F + +A A+ N+ +F G+ L
Sbjct: 706 IQAHFTTCGPINRVTILLDKFTGHPKGYAYVEFTEPNLVAQALVLNESVFRGRNL 760
>gi|328768093|gb|EGF78140.1| hypothetical protein BATDEDRAFT_91010 [Batrachochytrium
dendrobatidis JAM81]
Length = 182
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 9/123 (7%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
K++V+ + EE +E + VE++ Q + D K D + ++ N++ AT E+
Sbjct: 31 KKRVKEMEEEAAKLKEMQAEVEKEMGAQSVSD------KEEVDFRSVYIGNVDYSATPEE 84
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIA 465
++ F G ++ + IL DKFTG +G AY++F D +A AV ++ MF G+ K++
Sbjct: 85 IQAHFQSCGTINRVTILCDKFTGHPKGFAYLEFADAGSVANAVVLSESMFKGRLIKVTAK 144
Query: 466 RSN 468
R+N
Sbjct: 145 RTN 147
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDL 408
K+++Q + E E K+ E+ + P + V D + ++ N++ +T E+L
Sbjct: 39 KKRLQEM--EEEANRLKEVQEQSASEVPSSEEV--------DRRSVYVGNVDYGSTPEEL 88
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIAR 466
+ F + G ++ + IL DKFTG +G AY++F +E AV N+ +F G+ K+SI R
Sbjct: 89 QAHFKECGTINRVTILCDKFTGHPKGFAYIEFATEEGANNAVILNESLFRGRNLKVSIKR 148
Query: 467 SN 468
+N
Sbjct: 149 TN 150
>gi|323454513|gb|EGB10383.1| hypothetical protein AURANDRAFT_23087 [Aureococcus anophagefferens]
Length = 187
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TDE + ++ ++ AT E+L+ F+ G ++ + IL DKFTG+S+G AYV+F + +
Sbjct: 72 TDERSIYVGQVDYDATPEELQAHFAACGTINRVTILCDKFTGRSKGYAYVEFEEPASVPT 131
Query: 449 AVAKNKQMFLGKKLSIA--RSN 468
AV + +F G++L + R+N
Sbjct: 132 AVLLDNSIFKGRQLKVVAKRTN 153
>gi|327351492|gb|EGE80349.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 1373
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV------VRDVYSRATKNCPWVGELW 95
V LY+RA+ FP+ LW DY ++ + G+ RAT++CPW G LW
Sbjct: 503 VCALYQRAVLRFPIEVRLWEDYIMFIVEESMDGSPHGHYLPALPSLERATRHCPWSGTLW 562
Query: 96 VRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVE 152
+ +LS ER S +I+ + K+ L ++ + + T LRRR +
Sbjct: 563 SQHILSAERVGRSFTQIADIKHKATRTGLLDAGGIKQVIKVHTTWCSYLRRRAFQPDSTD 622
Query: 153 GVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVW 206
LD + + E+ Q + + + N D L RL Y +L +S D SAR +
Sbjct: 623 EDLDVAEVGIRSAIESIQELGEKDNTTVPN-DPLFRLERIYIRYLSESGSWD--SARETF 679
Query: 207 ERLLKISGAMLEAWQSYISMEI 228
+ L+ G E W Y + E+
Sbjct: 680 KGLIARHGHSYEFWIMYYTWEL 701
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V RI K G S+G +V F + AA+A ++Q
Sbjct: 1049 VSNLDWKATEDDLVELFTAYGEVEGARIPR-KANGASKGFGFVVFRTKKSAEAALAMHEQ 1107
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L++ S P K
Sbjct: 1108 LFRSRPLNVHISTPTPAK 1125
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ NI ++AT E+ R F G V+S + D+ TGKSRG +V+FI+ EH A AV + N
Sbjct: 246 YVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATAVDELN 305
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G+ L + R+ K ++
Sbjct: 306 GKDFKGQDLYVGRAQKKHERE 326
>gi|338214373|ref|YP_004658434.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
gi|336308200|gb|AEI51302.1| RNP-1 like RNA-binding protein [Runella slithyformis DSM 19594]
Length = 127
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
+++N+ KA ++LR F + G VSS RI+ DKFTGKSRG A+V+ +D+ A+++ N
Sbjct: 4 YVANVPFKANDDELRELFEEFGEVSSARIIMDKFTGKSRGFAFVEMPNDDEAKQAISQLN 63
Query: 454 KQMFLGKKLSIARSNPKQRK 473
F+GK L + + P++ +
Sbjct: 64 DFDFMGKVLVVNEARPREDR 83
>gi|300778389|ref|ZP_07088247.1| RNA-binding protein [Chryseobacterium gleum ATCC 35910]
gi|300503899|gb|EFK35039.1| RNA-binding protein [Chryseobacterium gleum ATCC 35910]
Length = 116
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+SNIN +L F++ G VSS +I+ D+ TG+SRG +V+ DDE A + N+
Sbjct: 4 FVSNINYATKEYELHDLFAEFGDVSSAKIVTDRETGRSRGFGFVEMGDDEGKQAIESLNQ 63
Query: 455 QMFLGKKLSIARSNPKQRK 473
+ F GK L+++ + P++ K
Sbjct: 64 KEFNGKTLNVSEAKPREEK 82
>gi|239614479|gb|EEQ91466.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 1294
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV------VRDVYSRATKNCPWVGELW 95
V LY+RA+ FP+ LW DY ++ + G+ RAT++CPW G LW
Sbjct: 499 VCALYQRAVLRFPIEVRLWEDYIMFIVEESMDGSPHGHYLPALPSLERATRHCPWSGTLW 558
Query: 96 VRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVE 152
+ +LS ER S +I+ + K+ L ++ + + T LRRR +
Sbjct: 559 SQHILSAERVGRSFTQIADIKHKATRTGLLDAGGIKQVIKVHTTWCSYLRRRAFQPDSTD 618
Query: 153 GVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVW 206
LD + + E+ Q + + + N D L RL Y +L +S D SAR +
Sbjct: 619 EDLDVAEVGIRSAIESIQELGEKDNTTVPN-DPLFRLERIYIRYLSESGSWD--SARETF 675
Query: 207 ERLLKISGAMLEAWQSYISMEI 228
+ L+ G E W Y + E+
Sbjct: 676 KGLIARHGHSYEFWIMYYTWEL 697
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V RI K G S+G +V F + AA+A ++Q
Sbjct: 970 VSNLDWKATEDDLVELFTAYGEVEGARIPR-KANGASKGFGFVVFRTKKSAEAALAMHEQ 1028
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L++ S P K
Sbjct: 1029 LFRSRPLNVHISTPTPAK 1046
>gi|261195985|ref|XP_002624396.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239587529|gb|EEQ70172.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
Length = 1294
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNV------VRDVYSRATKNCPWVGELW 95
V LY+RA+ FP+ LW DY ++ + G+ RAT++CPW G LW
Sbjct: 499 VCALYQRAVLRFPIEVRLWEDYIMFIVEESMDGSPHGHYLPALPSLERATRHCPWSGTLW 558
Query: 96 VRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVE 152
+ +LS ER S +I+ + K+ L ++ + + T LRRR +
Sbjct: 559 SQHILSAERVGRSFTQIADIKHKATRTGLLDAGGIKQVIKVHTTWCSYLRRRAFQPDSTD 618
Query: 153 GVLDYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVW 206
LD + + E+ Q + + + N D L RL Y +L +S D SAR +
Sbjct: 619 EDLDVAEVGIRSAIESIQELGEKDNTTVPN-DPLFRLERIYIRYLSESGSWD--SARETF 675
Query: 207 ERLLKISGAMLEAWQSYISMEI 228
+ L+ G E W Y + E+
Sbjct: 676 KGLIARHGHSYEFWIMYYTWEL 697
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V RI K G S+G +V F + AA+A ++Q
Sbjct: 970 VSNLDWKATEDDLVELFTAYGEVEGARIPR-KANGASKGFGFVVFRTKKSAEAALAMHEQ 1028
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L++ S P K
Sbjct: 1029 LFRSRPLNVHISTPTPAK 1046
>gi|358378925|gb|EHK16606.1| hypothetical protein TRIVIDRAFT_19040, partial [Trichoderma virens
Gv29-8]
Length = 171
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ E+
Sbjct: 7 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESVDARSIFVGNVDYSASPEE 59
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 60 VQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 116
>gi|154270706|ref|XP_001536207.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409781|gb|EDN05221.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1384
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 45 LYERAITDFPVSSDLWLDYTQYL-DKTLKVGNVVRDVYS-----RATKNCPWVGELWVRS 98
LY+R + FP W DY ++ + ++ G + + RAT++CPW G LW +
Sbjct: 502 LYQRVVLRFPTDVGFWEDYIMFIVEASMNGGPHSHYIPALPSLERATRHCPWSGTLWSQR 561
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
+LS ER+ S +I+ + K+ L E + + T LRRR + L
Sbjct: 562 ILSAERAGLSFTQIADIKHKATRTGLLDTGGINEVIKVHTTWCSYLRRRAFQPDSTDEDL 621
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + ++ + N D L RL Y +L +S D SAR ++ L
Sbjct: 622 DVAEVGIRSAIESIQELGEKDNKAVPN-DPLFRLERIYIRYLSESGSWD--SARETFKGL 678
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W Y + E+
Sbjct: 679 VARHGHSYEFWMMYYTWEL 697
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V + RI K G S+G +V F E A++A N+Q
Sbjct: 1040 VSNLDWKATEDDLVELFAAYGQVEAARIPR-KANGASKGFGFVVFQAKESAEASLAMNEQ 1098
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L + S P K
Sbjct: 1099 LFRSRPLHVHISTPTAAK 1116
>gi|322711381|gb|EFZ02954.1| putative rrm-type rna binding protein [Metarhizium anisopliae ARSEF
23]
Length = 196
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ E+
Sbjct: 36 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESVDARSIFVGNVDYSASPEE 88
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 89 IQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNESVFKGRNIKV 145
>gi|322694379|gb|EFY86210.1| putative rrm-type rna binding protein [Metarhizium acridum CQMa
102]
Length = 196
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ E+
Sbjct: 36 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESVDARSIFVGNVDYSASPEE 88
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 89 IQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALILNESVFKGRNIKV 145
>gi|189188122|ref|XP_001930400.1| hypothetical protein PTRG_00067 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972006|gb|EDU39505.1| hypothetical protein PTRG_00067 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1260
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Query: 29 YLKYEQSSGDPGRVQL---LYERAITDFPVSSDLWLDYTQYL----DKTLKVGNVVRDVY 81
YLK+E+ + L LYERA FPV + +W D+ ++L ++++ + NV+
Sbjct: 456 YLKWEKRTMGVYSFHLVNALYERATLRFPVDASIWEDHVEFLIWQDNRSVDLLNVL---- 511
Query: 82 SRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRI 138
RAT++CPW G LW +L+LE E++ V S L + +E + + L
Sbjct: 512 ERATRHCPWSGSLWSHRILTLEAENKPFEDLELVKHTATGSGLLEHTDLDELIKVQLAWC 571
Query: 139 DGLRRR 144
LRRR
Sbjct: 572 GYLRRR 577
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DKFTG +G AY++F D E + +
Sbjct: 161 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTS 220
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 221 LALDESLFRGRQIKV 235
>gi|358391874|gb|EHK41278.1| hypothetical protein TRIATDRAFT_169914, partial [Trichoderma
atroviride IMI 206040]
Length = 167
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ E+
Sbjct: 7 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESVDARSIFVGNVDYSASPEE 59
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 60 VQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 116
>gi|340520405|gb|EGR50641.1| predicted protein [Trichoderma reesei QM6a]
Length = 168
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ E+
Sbjct: 7 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESVDARSIFVGNVDYSASPEE 59
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 60 VQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 116
>gi|410908755|ref|XP_003967856.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Takifugu
rubripes]
Length = 232
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E +
Sbjct: 95 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ +F G+++ +
Sbjct: 155 AMALDESLFRGRQIKV 170
>gi|302912552|ref|XP_003050726.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
gi|256731664|gb|EEU45013.1| hypothetical protein NECHADRAFT_40692 [Nectria haematococca mpVI
77-13-4]
Length = 167
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + T+E+Q A K D + F+ N++ A+ E+
Sbjct: 6 KRRVAEMEEEAKKLREMQATLEQQ-------SADLADDKESIDARSIFVGNVDYSASPEE 58
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 59 IQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 115
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ NI ++AT E+ R F G V+S + D TGKSRG +V+FI+ EH A AV + N
Sbjct: 245 YVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATAVDELN 304
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G+ L + R+ K ++
Sbjct: 305 GKDFKGQDLYVGRAQKKHERE 325
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ AT E+L + F G V+ + IL DKF+G +G AY++F D + + A
Sbjct: 66 DQRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFADKDSVETA 125
Query: 450 VAKNKQMFLGKKLSI 464
+A + +F G+++ +
Sbjct: 126 MAMDDSLFRGRQIKV 140
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ +T +DL FS G ++ I IL DKF+G +G AY++F + + AA
Sbjct: 91 DKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAA 150
Query: 450 VAKNKQMFLGKKLSI 464
VA ++ +F G+ + +
Sbjct: 151 VAMDETVFRGRTIKV 165
>gi|395330550|gb|EJF62933.1| RNA-binding domain-containing protein, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 168
Score = 60.5 bits (145), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 349 KRQVQNLAEE-NEGRETKQTVEEQPKKQPIKDAVPGRT---KGFTDECTAFLSNINLKAT 404
K++V+ + E N+ RE + E+ + + VP T K D + ++ N++ AT
Sbjct: 6 KQRVEEMEREANKLRELQAAAEKAEQGAQGGEQVPMETEEDKAAADARSIYVGNVDYSAT 65
Query: 405 YEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KL 462
E++++ F G ++ + IL DKFTG +G AYV+F + E + AA+A + +F G+ K+
Sbjct: 66 PEEIQQHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPEFIDAALAMDNSLFRGRLIKV 125
Query: 463 SIARSN 468
+ R+N
Sbjct: 126 TPKRTN 131
>gi|348544129|ref|XP_003459534.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Oreochromis niloticus]
Length = 232
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E +
Sbjct: 95 ADGRSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSIA 465
A+A ++ +F G+++ +
Sbjct: 155 AMALDESLFRGRQIKVG 171
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T E LR +F+ G V+ ++I+ D TG+SRG ++ F EH ++
Sbjct: 92 DNCKMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTF---EHPSSV 148
Query: 450 --VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + RS P++ +D +G+
Sbjct: 149 DEVVKTQHILDGKVIDPKRSIPREEQDKTGK 179
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V ++K
Sbjct: 181 FVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTY-DSPDAVDRVCQSK 239
Query: 455 QM-FLGKKLSIARSNPKQ-RKDSSGERAPTEQAQSHQQTGNAGTSASK 500
+ F GK++ I R+ P+ +K G P + +QQTG G + +
Sbjct: 240 YIEFKGKQIEIKRAQPRHLQKGQYGGANPNNRNIQYQQTGAIGQAPAN 287
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ +T +DL FS G ++ I IL DKF+G +G AY++F + + AA
Sbjct: 91 DKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAA 150
Query: 450 VAKNKQMFLGKKLSI 464
VA ++ +F G+ + +
Sbjct: 151 VAMDETVFRGRTIKV 165
>gi|330936367|ref|XP_003305362.1| hypothetical protein PTT_18177 [Pyrenophora teres f. teres 0-1]
gi|311317661|gb|EFQ86548.1| hypothetical protein PTT_18177 [Pyrenophora teres f. teres 0-1]
Length = 1266
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 29 YLKYEQSSGDPGRVQL---LYERAITDFPVSSDLWLDYTQYL----DKTLKVGNVVRDVY 81
YLK+E+ + L LYERA FPV +W D+ ++L ++++ + NV+
Sbjct: 462 YLKWEKRTMGVYSFHLVNALYERATLRFPVDPSIWEDHVEFLIWQDNRSVDLLNVL---- 517
Query: 82 SRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK---SLLCAFSTFEEYLDLFLTRI 138
RAT++CPW G LW +L+LE E++ V S L + +E + + L
Sbjct: 518 ERATRHCPWSGSLWSHRILTLEAENKPFEDLELVKHTATGSGLLEHTDLDELIKVQLAWC 577
Query: 139 DGLRRR 144
LRRR
Sbjct: 578 GYLRRR 583
>gi|259482511|tpe|CBF77063.1| TPA: pre-mRNA splicing factor (Prp24), putative (AFU_orthologue;
AFUA_2G01820) [Aspergillus nidulans FGSC A4]
Length = 1290
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
+ +Y+RA+ F +++W DY +L GN S RAT++CP G LW +
Sbjct: 489 INAIYQRAVLRFQTDANIWEDYIMFLIDESMHGNAHPTTISALDRATRHCPGSGTLWSQY 548
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER +I+ + K+ L EE L + LRRR S + L
Sbjct: 549 LLSSEREGQPFTKIADIKHKATSTGLLDVGGMEEVLKVHTAWCSYLRRRAFLSEATDEDL 608
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 609 DVAEVGIRSAIESVQELGEKKYGRSYEGDPLFRLERIYIRYLSESGSWD--SARETFKGL 666
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 667 MGRRGNSYEFWLTYYHWEL 685
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN+N A+ +DL+ FS G V +R L K G S+G YV F E AA+A ++Q
Sbjct: 1000 VSNVNWSASEDDLKELFSRFGTVELVR-LPRKVDGGSKGFGYVVFSSKEEATAALAMHEQ 1058
Query: 456 MFLGKKLSIARSNPKQRK 473
F G+ L + S P+ K
Sbjct: 1059 EFRGRPLHVKVSAPQGAK 1076
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ +T +DL FS G ++ I IL DKF+G +G AY++F + + AA
Sbjct: 91 DKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAA 150
Query: 450 VAKNKQMFLGKKLSI 464
VA ++ +F G+ + +
Sbjct: 151 VAMDETVFRGRTIKV 165
>gi|440461571|gb|ELQ32355.1| polyadenylate-binding protein 2 [Magnaporthe oryzae Y34]
gi|440489256|gb|ELQ68921.1| polyadenylate-binding protein 2 [Magnaporthe oryzae P131]
Length = 213
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A
Sbjct: 90 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQ 149
Query: 449 AVAKNKQMFLGK--KLSIARSN 468
A+ N+ +F G+ K+S R+N
Sbjct: 150 ALVLNESVFKGRNIKVSPKRTN 171
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
+D + ++ N++ T E+L +F+ G V + IL DKF+G +G AY++F + A
Sbjct: 143 SDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKGYAYIEFAAESSAQA 202
Query: 449 AVAKNKQMFLGKKLSI 464
AVA +K +F G+ + +
Sbjct: 203 AVALDKSIFRGRVIKV 218
>gi|389635639|ref|XP_003715472.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
gi|351647805|gb|EHA55665.1| polyadenylate-binding protein 2 [Magnaporthe oryzae 70-15]
Length = 193
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A
Sbjct: 70 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGFAYVEFTEPSLVAQ 129
Query: 449 AVAKNKQMFLGK--KLSIARSN 468
A+ N+ +F G+ K+S R+N
Sbjct: 130 ALVLNESVFKGRNIKVSPKRTN 151
>gi|346326841|gb|EGX96437.1| RNP domain-containing protein [Cordyceps militaris CM01]
Length = 201
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + +E E RE + ++E+Q A K D + F+ N++ A+ E+
Sbjct: 40 KRRVAEMEQEAEKLREMQASLEQQ-------SASLADDKESVDSRSIFVGNVDYSASPEE 92
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKF+G+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 93 IQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 149
>gi|440636403|gb|ELR06322.1| hypothetical protein GMDG_07913 [Geomyces destructans 20631-21]
Length = 209
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 65 DSRSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPASVAQA 124
Query: 450 VAKNKQMFLGKKLSI 464
+ N+ +F G+ L +
Sbjct: 125 LVLNESLFRGRNLKV 139
>gi|225554943|gb|EEH03237.1| RNA-binding protein Prp24 [Ajellomyces capsulatus G186AR]
Length = 1309
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 45 LYERAITDFPVSSDLWLDYTQYL-DKTLKVGNVVRDVYS-----RATKNCPWVGELWVRS 98
LY+R + FP W DY ++ + ++ G + + RAT++CPW G LW +
Sbjct: 502 LYQRVVLRFPTDVGFWEDYIMFIVEASMNGGPHSHYIPALPSLERATRHCPWSGTLWSQR 561
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
+LS ER+ S +I+ + K+ L E + + T LRRR + L
Sbjct: 562 ILSAERAGRSFTQIADIKHKATRTGLLDTGGINEVIKVHTTWCSYLRRRAFQPDSTDEDL 621
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + ++ + N D L RL Y +L +S D SAR ++ L
Sbjct: 622 DVAEVGIRSAIESIQELGEKDNKAVPN-DPLFRLERIYIRYLSESGSWD--SARETFKGL 678
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W Y + E+
Sbjct: 679 VARHGHSYEFWMMYYTWEL 697
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V + RI K G S+G +V F E A++A N+Q
Sbjct: 965 VSNLDWKATEDDLVELFAAYGQVEAARIPR-KANGASKGFGFVVFQTKESAEASLAMNEQ 1023
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L + S P K
Sbjct: 1024 LFRSRPLHVHISTPTVAK 1041
>gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E +
Sbjct: 95 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFADKESVRT 154
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ +F G+++ +
Sbjct: 155 AMALDESLFRGRQIKV 170
>gi|156059388|ref|XP_001595617.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980]
gi|154701493|gb|EDO01232.1| hypothetical protein SS1G_03706 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 182
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ ED++ F G ++ + IL DKFTG +G AYV+F++ +A A
Sbjct: 64 DSRSIFVGNVDYSASPEDIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFVEPSLVAQA 123
Query: 450 VAKNKQMFLGKKL 462
+ N+ +F G+ L
Sbjct: 124 LVLNESVFKGRNL 136
>gi|347840519|emb|CCD55091.1| similar to pre-mRNA splicing factor (Prp24) [Botryotinia
fuckeliana]
Length = 1055
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 189/511 (36%), Gaps = 75/511 (14%)
Query: 42 VQLLYERAITDFPVSSD--LWLDYTQYLDKTLKVGNVVR-----DVYSRATKNCPWVGEL 94
V LYERA+ + D W DY ++ ++ V + + RAT +CPW G L
Sbjct: 237 VIALYERALASTTLGRDPATWEDYIAFVQQSYVVNPDAQLGSPLYIVQRATAHCPWSGSL 296
Query: 95 WVRSLLSLERSR---ASEEEIS-TVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRIL---F 147
W R +L E +S E+I +L T +E ++++ LRR +
Sbjct: 297 WARYILFAETQNWDFSSIEDIKHAATSTGVLDREETMDEVIEVYTAWCGYLRRNTIGKAL 356
Query: 148 SGEVEGVLDYSLIRETFQRASDYLSEQMKN--TDGLLRLYAYWAHLEQSMGKDMVSARGV 205
E V D L + + D+ K TD R+ G + AR
Sbjct: 357 EDEAFDVADAGL-PGSLEAVQDWGRRLHKREYTDPSFRIERIMIQYLTQKGS-IEEAREF 414
Query: 206 WERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTG---SEDICHAWL- 261
W+RL WQ Y S E+ + ++NE+ S+ S+ E I ++
Sbjct: 415 WKRLAHTHQKSYVFWQQYYSWEMSVRYLNESSSLPSMVLSRALRTKDLDWPEAIMELYIS 474
Query: 262 ---RFEREYGTLEDFD---HSVQKVTPR-----LEELRLFRSQQESKSL-PESADQKEHS 309
+E + L D Q VT R +E+ L+ +QQ+ + + PE+ D+
Sbjct: 475 HCNNYEDAHTLLAAKDLVRRQFQLVTKRREKLAIEQAELYAAQQQQQIVSPEATDEDSPG 534
Query: 310 VKKTGREKRKSDSN-------ISYEQSPAK----RQKHAPQK-----------PKKVHDK 347
K RE D+ I EQS A RQ+H + P +V
Sbjct: 535 NSKRKREPTSEDTTDGNTHKKIKNEQSTADAEVLRQQHLTRDRENTTVIVTNLPPEVTQT 594
Query: 348 EKRQ-------VQNLAEENEGRETKQT-VEEQPKKQPIKDAVPGRTKGFTDE-------- 391
+ RQ + +L + E + T + E ++ A K F +
Sbjct: 595 KVRQYFKEYGHINSLTLKTEADKLSSTCLIEFRSNDDVQSAFLRDGKFFGENQIKVESGT 654
Query: 392 -CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV 450
T +++N A + F D G + SIR KF R Y+ F E AAA
Sbjct: 655 GLTLYVTNYPPTADESYMHNLFKDCGEIFSIRWPSLKFNTHRR-FCYITFRKVEAAAAAT 713
Query: 451 AKNKQMFLGK-KLSIARSNPKQRKDSSGERA 480
+ + K KL S+P +K G A
Sbjct: 714 KLDGNLLENKFKLVAKYSDPAAKKQREGATA 744
>gi|407851931|gb|EKG05622.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 384 RTKGF--TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
++ GF T + F+ ++ + T +LR FFS G + + +L DKFTG+ +G AY++F
Sbjct: 74 KSTGFVATKNASIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFE 133
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIA 465
E AA + K+ Q GK L++A
Sbjct: 134 APEQAAAGILKDGQSLHGKPLNVA 157
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
F+ NI+ AT DL + F++VG V S +I+ DK TG+SRG +V+ DE AA+ A +
Sbjct: 6 FVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIKALD 65
Query: 454 KQMFLGKKLSIARSNPKQ 471
+ FLG+ +++ + PK+
Sbjct: 66 GKDFLGRPITVNVARPKE 83
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DKFTG +G AY++F D E + +
Sbjct: 160 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTS 219
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 220 LALDESLFRGRQIKV 234
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ NI+ AT DL++ D G ++ I IL++ +TG+S+G AYV+F D E AA
Sbjct: 80 DRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEGAKAA 139
Query: 450 VAKNKQMFLGKKLSI 464
+ N + L+I
Sbjct: 140 IELNGTELYSRALTI 154
>gi|260797827|ref|XP_002593902.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
gi|229279134|gb|EEN49913.1| hypothetical protein BRAFLDRAFT_61143 [Branchiostoma floridae]
Length = 166
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFT----------DECTAFLSNINLKATYEDLRRF 411
+E + VE Q P PG T G D + ++ N++ AT E+L
Sbjct: 9 KEMQNEVERQMNLSPTAQR-PGATAGVAFPSIEDKMEADGRSVYVGNVDYGATAEELEAH 67
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
F G ++ + IL DKFTG +G AY++F D + + A A + +F G+++ +
Sbjct: 68 FHGCGSINRVTILCDKFTGHPKGFAYIEFADKDSIETAKALDDSLFRGRQIKV 120
>gi|343427618|emb|CBQ71145.1| related to poly(a) binding protein II [Sporisorium reilianum SRZ2]
Length = 208
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ AT E++++ F G ++ + IL DKFTG +G AYV+F D +A A+ N+
Sbjct: 101 YVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFADPSLVANAMVLNE 160
Query: 455 QMFLGK--KLSIARSN 468
+F G+ K++ R+N
Sbjct: 161 SLFRGRLIKVTAKRTN 176
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ N++ AT +DL + FSD G V + I+ D+ TG+SRG A+V F ++E A A+
Sbjct: 5 CKVFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIK 64
Query: 452 K-NKQMFLGKKLSIARSNPK 470
+ +++ FLG+ +++ + K
Sbjct: 65 EMHEEDFLGRSVTVREAQSK 84
>gi|71408239|ref|XP_806536.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70870310|gb|EAN84685.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 384 RTKGF--TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
++ GF T + F+ ++ + T +LR FFS G + + +L DKFTG+ +G AY++F
Sbjct: 74 KSTGFVATKNTSIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFE 133
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIA 465
E AA + K+ Q GK L++A
Sbjct: 134 APEQAAAGILKDGQSLHGKPLNVA 157
>gi|399023681|ref|ZP_10725736.1| RRM domain-containing RNA-binding protein [Chryseobacterium sp.
CF314]
gi|398082380|gb|EJL73134.1| RRM domain-containing RNA-binding protein [Chryseobacterium sp.
CF314]
Length = 121
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+SNIN +L+ F++ G VSS +I+ DK TG+SRG +++ D+E A + N+
Sbjct: 4 FVSNINYATKEYELQDLFAEFGEVSSAKIITDKETGRSRGFGFIEMNDEEGQQAIDSLNQ 63
Query: 455 QMFLGKKLSIARSNPKQRK 473
+ F GK L+++ + P++ K
Sbjct: 64 KEFNGKVLNVSEAKPREEK 82
>gi|350629412|gb|EHA17785.1| hypothetical protein ASPNIDRAFT_55885 [Aspergillus niger ATCC 1015]
Length = 192
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 68 DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 127
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 128 LVLNESVFRGRNLKVVPKRTN 148
>gi|167517171|ref|XP_001742926.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778025|gb|EDQ91640.1| predicted protein [Monosiga brevicollis MX1]
Length = 95
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G ++ D + ++ N+ AT E+++ F D G V I+I+ DKFTG +G YV+F +
Sbjct: 2 GESREEVDARSIYVGNVEYAATEEEIQALFKDCGVVKRIKIMRDKFTGHPKGFCYVEFAE 61
Query: 443 DEHLAAAVAKNKQMFLGKKLSI 464
+ A+A ++ MF G+++ +
Sbjct: 62 PNAVPLAMALDESMFHGRQIKV 83
>gi|242042437|ref|XP_002468613.1| hypothetical protein SORBIDRAFT_01g048990 [Sorghum bicolor]
gi|241922467|gb|EER95611.1| hypothetical protein SORBIDRAFT_01g048990 [Sorghum bicolor]
Length = 253
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+A++ N++ T +DLR FF ++S+R DK TG SRG +VDF DDE L AVA
Sbjct: 175 SAYVGNLSWNVTEKDLRDFFRS-SKIASVRFAIDKRTGGSRGFCHVDFQDDESLEKAVAM 233
Query: 453 NKQMFLGKKLSIARS 467
N+ G+ + +A S
Sbjct: 234 NQSELQGRPVKVAYS 248
>gi|145239151|ref|XP_001392222.1| polyadenylate-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134076726|emb|CAK39785.1| unnamed protein product [Aspergillus niger]
Length = 189
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 65 DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 125 LVLNESVFRGRNLKVVPKRTN 145
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 11/114 (9%)
Query: 370 EQPKKQPIKDAVPGRTKGFT-------DECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
E+P K+ D+ P ++ T D+ + ++ N++ ++T E L FFS VG V +
Sbjct: 22 EEPAKETGLDSEPEKSSDSTLQAQEEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRVT 81
Query: 423 ILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-NKQMFLGKKLSIA--RSN-PKQR 472
IL DKF+G +G AYV+F + E A+ + N F G++L + R+N P QR
Sbjct: 82 ILFDKFSGFPKGYAYVEFEEYESAQKAIEELNGSPFRGRELRVMTKRTNIPGQR 135
>gi|121702091|ref|XP_001269310.1| RNP domain protein [Aspergillus clavatus NRRL 1]
gi|119397453|gb|EAW07884.1| RNP domain protein [Aspergillus clavatus NRRL 1]
Length = 188
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 125 LVLNESVFRGRNLKVVPKRTN 145
>gi|119496085|ref|XP_001264816.1| RNP domain protein [Neosartorya fischeri NRRL 181]
gi|119412978|gb|EAW22919.1| RNP domain protein [Neosartorya fischeri NRRL 181]
Length = 190
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 125 LVLNESVFRGRNLKVVPKRTN 145
>gi|71654126|ref|XP_815688.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70880762|gb|EAN93837.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 231
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 384 RTKGF--TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
++ GF T + F+ ++ + T +LR FFS G + + +L DKFTG+ +G AY++F
Sbjct: 74 KSTGFVATKNTSIFVGGLDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFE 133
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIA 465
E AA + K+ Q GK L++A
Sbjct: 134 APEQAAAGILKDGQSLHGKPLNVA 157
>gi|407416749|gb|EKF37788.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 212
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
T + F+ ++ + T +LR FFS G + + +L DKFTG+ +G AY++F E AA
Sbjct: 62 TKNTSIFVGGMDPRTTEGELRVFFSSCGTIKRLTMLRDKFTGQLKGNAYIEFEAPEQAAA 121
Query: 449 AVAKNKQMFLGKKLSIA 465
+ K+ Q GK L++A
Sbjct: 122 GILKDGQSLHGKPLNVA 138
>gi|195456672|ref|XP_002075236.1| GK16926 [Drosophila willistoni]
gi|194171321|gb|EDW86222.1| GK16926 [Drosophila willistoni]
Length = 806
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 106/279 (37%), Gaps = 44/279 (15%)
Query: 40 GRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKVG-----NVVRDVYSRATKNCPWVGEL 94
G +L++ER + FP +W+DY +++ G N V ++ T C W G L
Sbjct: 283 GLCKLIFERCVAKFPTVDAVWMDYIHFVENENTDGEAGSKNPSEQVSTKKTARCSW-GYL 341
Query: 95 WVRSLLSLERSRASEEEIST------VFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFS 148
L R+ I T + E+S + E L L L RI + +
Sbjct: 342 KASPLDLARRAVKCHPSIRTNHKFLNLMERSGYTP-AQVESELKLLLARI-----QPEMN 395
Query: 149 GEVEGVLDY----------------SLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHL 191
VE LDY + +R FQ + D LS+ + D + WAH+
Sbjct: 396 MTVELHLDYLAYLLRAKNVGEEEQANQVRAAFQSSWDILSDLYGDQADTSYEMLQLWAHV 455
Query: 192 EQSMGKDMVSARGVWERLLKISGAML--EAWQSYISMEIELDHINEARSIYKRCYSKRFT 249
E + A +W +++ G+ + W SY ME E + + A + + +
Sbjct: 456 EYCLMASPAKAVEIWRQIMGYPGSSYRGQLWMSYAQMECEYNGVQSALVVLREAMGQ--- 512
Query: 250 GTGSED---ICHAWLRFEREYGTLEDFDHSVQKVTPRLE 285
ED + + R+ER +GT E + P E
Sbjct: 513 -PAMEDAHLVQELYRRYERIHGTYETIAECQSQKAPEPE 550
>gi|229495244|ref|ZP_04388979.1| RNA-binding protein [Porphyromonas endodontalis ATCC 35406]
gi|229317687|gb|EEN83585.1| RNA-binding protein [Porphyromonas endodontalis ATCC 35406]
Length = 86
Score = 59.3 bits (142), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
+L N+N K EDL G V++ RI+ D+ TG+SRG +V+ D+E L A A N+
Sbjct: 4 YLGNLNFKVKAEDLTALVQQYGSVANARIITDRETGRSRGFGFVEMDDEEALVAIEALNE 63
Query: 455 QMFLGKKLSIARSNPKQRKDSSGERAP 481
Q F+G+KL + ++ + ERAP
Sbjct: 64 QEFMGRKLVVKQAEERP------ERAP 84
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 45 LYERAITDFPVSSDLWLDYTQYLDKTLKVGNV------VRDVYSRATKNCPWVGELWVRS 98
LY+R + FP W DY ++ + G RAT++CPW G LW +
Sbjct: 502 LYQRVVLRFPTDVGFWEDYIMFIVEASMNGGPHNHYIPALPSLERATRHCPWSGTLWSQH 561
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
+LS ER+ S +I+ + K+ L E + + T LRRR + L
Sbjct: 562 ILSAERAGRSFTQIADIKHKATRTGLLDTGGINEVIKVHTTWCSYLRRRAFQLDSTDEDL 621
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + ++ + N D L RL Y +L +S D SAR ++ L
Sbjct: 622 DVAEVGIRSAIESIQELGEKDNKAVPN-DPLFRLERIYIRYLSESGSWD--SARETFKGL 678
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W Y + E+
Sbjct: 679 VARHGHSYEFWMMYYTWEL 697
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V + RI K G S+G +V F E A++A N+Q
Sbjct: 965 VSNLDWKATEDDLVELFAAYGQVEAARIPR-KANGASKGFGFVVFQTKESAEASLAMNEQ 1023
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L + S P K
Sbjct: 1024 LFRSRPLHVHISTPTVAK 1041
>gi|255535545|ref|YP_003095916.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
gi|255341741|gb|ACU07854.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
Length = 122
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+SNIN E L+ FS+ G VSS +I+ D+ TG+SRG +V+ D++ A A N
Sbjct: 5 FVSNINYSTREESLQDLFSEFGEVSSAKIITDRETGRSRGFGFVEMSDEDGKNAIEALNG 64
Query: 455 QMFLGKKLSIARSNPKQRK 473
+ GK+L+++ + P++ K
Sbjct: 65 KELDGKELNVSEAKPREDK 83
>gi|384490131|gb|EIE81353.1| hypothetical protein RO3G_06058 [Rhizopus delemar RA 99-880]
Length = 423
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
+D T + +N ++T +D+R FF G + +RI D TGK+RG +VDF E A
Sbjct: 197 SDVYTIWCGGLNYQSTADDVREFFGSCGEIKDVRIRMDDATGKNRGFCHVDFATQEGKEA 256
Query: 449 AVAKNKQMFLGKKLSI--ARSNPKQR 472
A+A + F+G+K+ + A + +QR
Sbjct: 257 ALAMSGNEFMGRKIRLDGADGSTRQR 282
>gi|340372421|ref|XP_003384742.1| PREDICTED: polyadenylate-binding protein 2-like [Amphimedon
queenslandica]
Length = 273
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 74/131 (56%), Gaps = 16/131 (12%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGF--------TDECTAFLSNI 399
K +V+ + EE E +E + VE++ + + P +T F +D + ++ N+
Sbjct: 90 KARVKEMEEEAEKLKEMQGEVEKE-----LMGSKPAQTNNFPTMEEKLESDSRSVYVGNV 144
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
+ +AT E+L + F+ G ++ + IL DK++G +G AYV+FI+ + + A+ ++ +F G
Sbjct: 145 DYQATAEELGQHFNGCGSINRVTILCDKYSGHPKGFAYVEFIESDSVKMALDLDESLFRG 204
Query: 460 KKLSIA--RSN 468
+++ + R+N
Sbjct: 205 RQIKVTAKRTN 215
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 381 VPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF 440
PG +G+ ++ N++ T +DL++FFSD +SSIR DK TG+ RG +VDF
Sbjct: 282 APGIVEGYN---RIYVGNLSWDITEDDLKKFFSDCK-ISSIRFGMDKETGEFRGYGHVDF 337
Query: 441 IDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
D++ L A+ ++++ G+ + I+ + PK+
Sbjct: 338 SDNDSLVKALKLDQRIVCGRPIKISCAVPKK 368
>gi|443895148|dbj|GAC72494.1| splicing factor RNPS1, partial [Pseudozyma antarctica T-34]
Length = 160
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ AT E+L++ F G ++ + IL DKFTG +G AYV+F D +A A+ N+
Sbjct: 95 YVGNVDYGATPEELQQHFQSCGTINRVTILCDKFTGHPKGYAYVEFADPSLVANAMVLNE 154
Query: 455 QMFLGK 460
+F G+
Sbjct: 155 SLFRGR 160
>gi|310800127|gb|EFQ35020.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 203
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE RE + ++++Q ++ K D + F+ N++ A+ E+
Sbjct: 42 KRRVAEMEEEAAKLREMQASLDQQSREL-------SENKEDIDSRSIFVGNVDYSASPEE 94
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA-- 465
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 95 IQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPK 154
Query: 466 RSN 468
R+N
Sbjct: 155 RTN 157
>gi|240274320|gb|EER37837.1| pre-mRNA splicing factor [Ajellomyces capsulatus H143]
Length = 1334
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 18/199 (9%)
Query: 45 LYERAITDFPVSSDLWLDYTQYLDKTLKVGNV------VRDVYSRATKNCPWVGELWVRS 98
LY+R + FP W DY ++ + G RAT++CPW G LW +
Sbjct: 452 LYQRVVLRFPTDVGFWEDYIMFIVEASMNGGPHNHYIPALPSLERATRHCPWSGTLWSQH 511
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
+LS ER+ S +I+ + K+ L E + + T LRRR + L
Sbjct: 512 ILSAERAGRSFTQIADIKHKATRTGLLDTGGINEVIKVHTTWCSYLRRRAFQLDSTDEDL 571
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + ++ + N D L RL Y +L +S D SAR ++ L
Sbjct: 572 DVAEVGIRSAIESIQELGEKDNKAVPN-DPLFRLERIYIRYLSESGSWD--SARETFKGL 628
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W Y + E+
Sbjct: 629 VARHGHSYEFWMMYYTWEL 647
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN++ KAT +DL F+ G V + RI K G S+G +V F E A++A N+Q
Sbjct: 990 VSNLDWKATEDDLVELFAAYGQVEAARIPR-KANGASKGFGFVVFQTKESAEASLAMNEQ 1048
Query: 456 MFLGKKLSIARSNPKQRK 473
+F + L + S P K
Sbjct: 1049 LFRSRPLHVHISTPTVAK 1066
>gi|406607797|emb|CCH40902.1| Embryonic polyadenylate-binding protein 2 [Wickerhamomyces
ciferrii]
Length = 228
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TD + ++ N++ T E+L FFS +G ++ + IL D+FTG+ +G AYV+F + +
Sbjct: 69 TDSRSVYIGNVDYNTTPEELEEFFSKIGTINRVTILFDRFTGRPKGYAYVEFESQSSVDS 128
Query: 449 AVAKNKQMFLGKKLSI 464
A+ + Q F + +S+
Sbjct: 129 AIGLSGQEFKDRIISV 144
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++SN++ + EDLR+ F+D G ++S +++ D+ TG+SRG +V+ DDE A+ + N
Sbjct: 4 YISNLSYNISDEDLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEELN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGER 479
+ + GK ++I + P++ + G R
Sbjct: 64 QASYDGKVINITEARPREDRGDRGGR 89
>gi|426383231|ref|XP_004058190.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Gorilla
gorilla gorilla]
Length = 275
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT--KGFTDECTAFLSNINLKATYEDLR 409
VQ+ AEE EG Q + + P+ PG K D + ++ N++ + E+L
Sbjct: 106 VQHQAEEEEGTAAGQLLSPETMGCPL----PGTPEEKVEADHRSVYVGNVDYGGSAEELE 161
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 162 AHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 216
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 32/238 (13%)
Query: 29 YLKYEQSSGDPGRVQLLYERAITDFPVS-SDLWLDYTQYLDKTLKVGNVVRDVYSRATKN 87
Y+++E GD G++ ++Y+RA+ D DLW++Y Y +T +++ +Y RA+++
Sbjct: 254 YIEFELKCGDYGKIMMVYQRALDDLGYERDDLWINYANYALRTSHSRSLL--IYERASRH 311
Query: 88 CPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLR----- 142
P +WV +L + ++ ++F S A S + L +T D +R
Sbjct: 312 MPKSVSIWVNYMLVMATKSPRISDLISLFNASKT-AVSDLSNLITLHITAADCIRRTNPG 370
Query: 143 -----RRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGK 197
R IL SGE E ++SD +Q++ + G+ R+ +YW+ E +
Sbjct: 371 SISEFRNILSSGE-----------ELLSKSSD---KQLE-SRGVYRILSYWSKYELKLLV 415
Query: 198 DMVSAR--GVWERLLKISGAMLEAWQSYISMEIELD-HINEARSIYKRCYSKRFTGTG 252
S+ V R L W I LD HI++ I + Y+ + T
Sbjct: 416 KHSSSEYVNVISRFLTRYKDDPLCWLYLIDGVKSLDKHISDISDIINKIYTGLCSTTN 473
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 393 TAFLSNINLKATYEDLRRFFS-DVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T +++N++ K T ++L FF+ G V +++I D+ GKSRG +V+F D+ A+
Sbjct: 996 TVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRM-GKSRGYGFVEFCDERTAMDALL 1054
Query: 452 KNKQMFLGKKLSIARSNPKQRKDS 475
+ + +++ ++RSN KDS
Sbjct: 1055 LSTLVLDDREILVSRSNRAIYKDS 1078
>gi|70995100|ref|XP_752316.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|66849951|gb|EAL90278.1| RNP domain protein [Aspergillus fumigatus Af293]
gi|159131072|gb|EDP56185.1| RNP domain protein [Aspergillus fumigatus A1163]
Length = 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 90 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 149
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 150 LVLNESVFRGRNLKVVPKRTN 170
>gi|24214620|ref|NP_712101.1| RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45657838|ref|YP_001924.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116328465|ref|YP_798185.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331197|ref|YP_800915.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|359685806|ref|ZP_09255807.1| RNA-binding protein [Leptospira santarosai str. 2000030832]
gi|359726906|ref|ZP_09265602.1| RNA-binding protein [Leptospira weilii str. 2006001855]
gi|386074008|ref|YP_005988325.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|398332637|ref|ZP_10517342.1| RNA-binding protein [Leptospira alexanderi serovar Manhao 3 str. L
60]
gi|410450551|ref|ZP_11304588.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|417760452|ref|ZP_12408475.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|417765544|ref|ZP_12413504.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417775540|ref|ZP_12423393.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|417781669|ref|ZP_12429418.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|417783687|ref|ZP_12431403.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|418668620|ref|ZP_13230020.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418672853|ref|ZP_13234186.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|418684012|ref|ZP_13245203.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418693004|ref|ZP_13254073.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|418696158|ref|ZP_13257167.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|418699596|ref|ZP_13260554.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704274|ref|ZP_13265152.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418710854|ref|ZP_13271620.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418716814|ref|ZP_13276777.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|418719262|ref|ZP_13278462.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|418726301|ref|ZP_13284912.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|418734639|ref|ZP_13291080.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|418739027|ref|ZP_13295420.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|418744825|ref|ZP_13301171.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|418755775|ref|ZP_13311971.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|421084617|ref|ZP_15545475.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|421094388|ref|ZP_15555106.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|421100627|ref|ZP_15561250.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|421103448|ref|ZP_15564047.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421113326|ref|ZP_15573770.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|421118783|ref|ZP_15579118.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119714|ref|ZP_15580032.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|421126199|ref|ZP_15586437.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421137268|ref|ZP_15597355.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|422004225|ref|ZP_16351446.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|24195595|gb|AAN49119.1|AE011365_5 RNA-binding protein [Leptospira interrogans serovar Lai str. 56601]
gi|45601078|gb|AAS70561.1| RNA-binding protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|116121209|gb|ABJ79252.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116124886|gb|ABJ76157.1| RNA-binding protein [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|353457797|gb|AER02342.1| RNA-binding protein [Leptospira interrogans serovar Lai str. IPAV]
gi|400324233|gb|EJO76531.1| hypothetical protein LEP1GSC045_1894 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400352243|gb|EJP04441.1| hypothetical protein LEP1GSC007_1775 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357111|gb|EJP13258.1| hypothetical protein LEP1GSC080_1903 [Leptospira interrogans str.
FPW2026]
gi|409943682|gb|EKN89276.1| hypothetical protein LEP1GSC027_0555 [Leptospira interrogans str.
2002000624]
gi|409953074|gb|EKO07577.1| hypothetical protein LEP1GSC077_2793 [Leptospira interrogans str.
C10069]
gi|409955687|gb|EKO14619.1| hypothetical protein LEP1GSC081_1448 [Leptospira kirschneri str.
H1]
gi|409960211|gb|EKO23965.1| hypothetical protein LEP1GSC104_2204 [Leptospira interrogans str.
UI 12621]
gi|409963980|gb|EKO31880.1| hypothetical protein LEP1GSC179_0669 [Leptospira santarosai str.
MOR084]
gi|410009807|gb|EKO67963.1| hypothetical protein LEP1GSC069_1297 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410015637|gb|EKO77732.1| hypothetical protein LEP1GSC068_2887 [Leptospira sp. Fiocruz
LV3954]
gi|410018482|gb|EKO85320.1| hypothetical protein LEP1GSC009_1749 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347480|gb|EKO98377.1| hypothetical protein LEP1GSC057_2152 [Leptospira interrogans str.
Brem 329]
gi|410362810|gb|EKP13845.1| hypothetical protein LEP1GSC128_0728 [Leptospira borgpetersenii
str. 200801926]
gi|410366693|gb|EKP22082.1| hypothetical protein LEP1GSC117_3375 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432901|gb|EKP77254.1| hypothetical protein LEP1GSC173_1895 [Leptospira santarosai str.
HAI1594]
gi|410436289|gb|EKP85407.1| hypothetical protein LEP1GSC020_3724 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410574865|gb|EKQ37894.1| hypothetical protein LEP1GSC025_3203 [Leptospira interrogans str.
2002000621]
gi|410580163|gb|EKQ47991.1| hypothetical protein LEP1GSC026_0628 [Leptospira interrogans str.
2002000623]
gi|410744415|gb|EKQ93156.1| hypothetical protein LEP1GSC101_3790 [Leptospira borgpetersenii
str. UI 09149]
gi|410745725|gb|EKQ98635.1| hypothetical protein LEP1GSC121_3280 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410755352|gb|EKR16982.1| hypothetical protein LEP1GSC019_3521 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410761438|gb|EKR27618.1| hypothetical protein LEP1GSC087_2628 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410766007|gb|EKR36696.1| hypothetical protein LEP1GSC096_2774 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410768454|gb|EKR43701.1| hypothetical protein LEP1GSC097_1099 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410772759|gb|EKR52798.1| hypothetical protein LEP1GSC105_1904 [Leptospira interrogans str.
UI 12758]
gi|410778400|gb|EKR63029.1| hypothetical protein LEP1GSC036_2522 [Leptospira weilii str.
2006001853]
gi|410787585|gb|EKR81317.1| hypothetical protein LEP1GSC099_0521 [Leptospira interrogans str.
UI 08452]
gi|410794311|gb|EKR92220.1| hypothetical protein LEP1GSC163_4293 [Leptospira santarosai str.
CBC379]
gi|410796430|gb|EKR98566.1| hypothetical protein LEP1GSC125_1674 [Leptospira borgpetersenii
str. 200901122]
gi|410801100|gb|EKS07274.1| hypothetical protein LEP1GSC071_0300 [Leptospira santarosai str.
JET]
gi|417257025|gb|EKT86432.1| RNA-binding protein [Leptospira santarosai serovar Shermani str. LT
821]
gi|455666044|gb|EMF31517.1| hypothetical protein LEP1GSC201_1675 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455791968|gb|EMF43753.1| hypothetical protein LEP1GSC067_3245 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456821541|gb|EMF70047.1| hypothetical protein LEP1GSC148_0536 [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456861145|gb|EMF79850.1| hypothetical protein LEP1GSC188_1846 [Leptospira weilii serovar
Topaz str. LT2116]
gi|456874070|gb|EMF89395.1| hypothetical protein LEP1GSC005_1881 [Leptospira santarosai str.
ST188]
gi|456887997|gb|EMF99005.1| hypothetical protein LEP1GSC123_3441 [Leptospira borgpetersenii
str. 200701203]
Length = 91
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
++ N+ +AT +DLR+ F G V+S+RI+ DK +GKSRGLA+V+ + E AA+ N
Sbjct: 4 YIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKEEGNAAIDGLN 63
Query: 454 KQMFLGKKLSIARSNPKQ 471
G+++ + + PK+
Sbjct: 64 GTQIRGREIKVNEALPKK 81
>gi|358370907|dbj|GAA87517.1| RNP domain protein [Aspergillus kawachii IFO 4308]
Length = 190
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 125 LVLNESVFRGRNLKVVPKRTN 145
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ NI ++AT E+ R F G V+S + D +GKSRG +V+FI+ EH A AV + N
Sbjct: 245 YVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATAVDELN 304
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G+ L + R+ K ++
Sbjct: 305 GKDFKGQDLYVGRAQKKHERE 325
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 23/260 (8%)
Query: 214 GAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDF 273
G E W YI +E ++ R ++ S + IC ++L+FERE GTLE +
Sbjct: 5 GNQCEYWLQYIELERNFGELSNCRKLF--FMSINSVNDDPDKICSSFLQFEREQGTLESY 62
Query: 274 DHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKR 333
+ +K + +L+ ++ R + K++ + Q+++S K R+ N ++S +R
Sbjct: 63 LVAAKKCSAQLDRIKERRQKASEKTV--NKRQQKYS-KTEHRQTMYPKENTERDRSAKRR 119
Query: 334 QKHAPQKPKKVHDKEKRQVQNLAEENEGR---ETKQTVEEQPKKQPIKDAVPGRTKGFTD 390
+ P EE+ + T TV E K + + +
Sbjct: 120 KMEVP------------SYVFFTEESSSKTKCSTGATVTEIKPHAMSKKKIDSKKLEVNE 167
Query: 391 ECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK--SRGLAYVDFIDDEHLAA 448
E T F+SN+ + L + FS G V+ +R++ KF GK + AYV+F E
Sbjct: 168 ENTIFVSNLASDTDEDQLHKLFSQCGQVADVRLIK-KFGGKFGTNVYAYVEFTTSEPTVE 226
Query: 449 AVAKNKQMFLGKKLSIARSN 468
A+ + + + + ++ N
Sbjct: 227 ALKLDHTVLNSRAIYVSSCN 246
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDD 443
R + ++ T F++N+ + DL F +V V ++R++ +K G+S+G AY+++ +
Sbjct: 249 RQNKYNNKATVFVTNVAHDLSERDLEDIFKEVDQVKAVRLVRNK-KGRSKGFAYIEYDTE 307
Query: 444 EHLAAAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKES 502
AAV + N + GK + +A S P ASKE
Sbjct: 308 SSARAAVFQLNDREMAGKNIKVAISKP---------------------------PASKEL 340
Query: 503 SIETSKQSRGRGDSVQLKGKNT-FAVPRNVRPLGFPAIKPKTEEGED---LKPKSNDEFR 558
+ K R V +K N A PR R L A K T + + KSNDEFR
Sbjct: 341 PVAQKKDPFTRD--VHMKETNLPKASPR--RALTLDAAKSATTSSDSDIAVTKKSNDEFR 396
Query: 559 KMFIK 563
+MF+K
Sbjct: 397 QMFLK 401
>gi|324515910|gb|ADY46353.1| Polyadenylate-binding protein 2 [Ascaris suum]
Length = 217
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ +T E+L F G V+ + IL DK+TG +G AY++F D E +
Sbjct: 88 ADSRSIYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKYTGHPKGFAYIEFADKESVQT 147
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
A+A ++ +F G+++ + + S+ R P
Sbjct: 148 AMALDESLFRGRQIKVCPKRTNRPGVSTTNRPP 180
>gi|67521766|ref|XP_658944.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|40746367|gb|EAA65523.1| hypothetical protein AN1340.2 [Aspergillus nidulans FGSC A4]
gi|259488327|tpe|CBF87685.1| TPA: RNP domain protein (AFU_orthologue; AFUA_1G09490) [Aspergillus
nidulans FGSC A4]
Length = 187
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 66 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 125
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 126 LVLNESVFRGRNLKVVPKRTN 146
>gi|345561633|gb|EGX44721.1| hypothetical protein AOL_s00188g59 [Arthrobotrys oligospora ATCC
24927]
Length = 204
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQTHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 125 LVLNESIFRGRALKVVPKRTN 145
>gi|405118694|gb|AFR93468.1| poly(A) binding protein [Cryptococcus neoformans var. grubii H99]
Length = 201
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G + D + F+ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F +
Sbjct: 75 GESSEAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAE 134
Query: 443 DEHLAAAVAKNKQMFLGKKLSI 464
+ A+ N+ MF G+ L +
Sbjct: 135 PSIVQNALVLNESMFKGRMLQV 156
>gi|357612937|gb|EHJ68241.1| polyadenylate binding protein 2 [Danaus plexippus]
Length = 217
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TD + ++ N++ AT E+L + F G ++ + IL +KF G +G AY++F D + +
Sbjct: 93 TDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQT 152
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
A+A ++ +F G+++ + + S+ R P
Sbjct: 153 AMAMDESLFRGRQIKVMPKRTNKPGLSTTNRPP 185
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +F+ G V ++I+ D TG+SRG ++ F EH ++
Sbjct: 195 DSCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTF---EHPSSV 251
Query: 450 --VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + RS PK+ +D G+
Sbjct: 252 DEVVKTQHILDGKVIDPKRSIPKEEQDKIGK 282
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG ++ + D V +NK
Sbjct: 284 FVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITY-DSADAVDKVCQNK 342
Query: 455 QM-FLGKKLSIARSNPKQRKDSSGERAPTEQAQ 486
+ F GK++ + R+ Q++ S G+ A +Q
Sbjct: 343 YIDFKGKQIEVKRA---QQRHSHGKPADASNSQ 372
>gi|400601143|gb|EJP68786.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 194
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE + RE + ++E+Q A K D + F+ N++ A+ E+
Sbjct: 34 KRRVAEMEEEAKKLREMQASLEQQ-------SASLADDKESVDARSIFVGNVDYSASPEE 86
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ F G ++ + IL DKF+G+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 87 IQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFTEPSLVAQALVLNESVFKGRNIKV 143
>gi|226291492|gb|EEH46920.1| hypothetical protein PADG_03018 [Paracoccidioides brasiliensis
Pb18]
Length = 264
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 140 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 199
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 200 LVLNESVFRGRNLKVVPKRTN 220
>gi|58263254|ref|XP_569037.1| poly(A) binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107872|ref|XP_777318.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260008|gb|EAL22671.1| hypothetical protein CNBB1200 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223687|gb|AAW41730.1| poly(A) binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 210
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G + D + F+ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F +
Sbjct: 84 GESSEAVDMRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAE 143
Query: 443 DEHLAAAVAKNKQMFLGKKLSI 464
+ A+ N+ MF G+ L +
Sbjct: 144 PSIVQNALVLNESMFRGRMLQV 165
>gi|453089325|gb|EMF17365.1| cell cycle control protein [Mycosphaerella populorum SO2202]
Length = 675
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 49/264 (18%)
Query: 1 MCNARAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSD-- 58
+ R EEQ+ + + + + Y + E++ GDP RV+ +YERAI P S +
Sbjct: 303 LSKRRVLYEEQVK----ENPKNYDAWFDYARLEEAGGDPDRVRDVYERAIAQMPPSHEKR 358
Query: 59 -------LWLDYTQYLDKTLKVGNVVRDVYSRATKNCPW----VGELWV-RSLLSLERSR 106
LW+ Y Y + T K + + VY A K P ++WV ++ L R
Sbjct: 359 HWRRYIYLWIFYAMYEELTTKDLDRAQQVYDEAIKIVPHKKFTFAKIWVLKAQFHLRRQE 418
Query: 107 ASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQR 166
+ L F Y++L L + +R R L+ +E D S
Sbjct: 419 LDRARKTLGMAIGLCPKNKVFRSYIELELKLFEFVRCRTLYEKWIE--FDSS-------- 468
Query: 167 ASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLE----AWQS 222
N+ G ++ A LE+ + +D+ AR ++E L I L+ AW++
Sbjct: 469 ----------NSQGWIKF----AELERGL-EDLERARAIFE--LAIQQDQLDMPELAWKA 511
Query: 223 YISMEIELDHINEARSIYKRCYSK 246
YI E E ++ R +Y+R K
Sbjct: 512 YIDFEEEEGEFDKTRDLYERLLQK 535
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F I L+AT D+ FFS G V +RI+ D+ + +SRG+ YV+F D + A
Sbjct: 180 DQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMA 239
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q LG+ + + S
Sbjct: 240 IALSGQPLLGQPVMVKPS 257
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E + +
Sbjct: 59 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTS 118
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 119 LALDESLFRGRQIKV 133
>gi|443713406|gb|ELU06276.1| hypothetical protein CAPTEDRAFT_174932 [Capitella teleta]
Length = 184
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 292 SQQESKSLPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQ 351
+ +ES +L E + + + S G D + ++ K + +K K++ + ++Q
Sbjct: 26 ATEESTALLEESAEVDVSATANGDADSVDDPELEAIKARVKEMEEEAEKLKEMQSEVEKQ 85
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+ NL+ + G T AV K D + ++ N++ AT E+L
Sbjct: 86 M-NLSSSSMGSPTP--------------AVSLEDKLDADNRSIWVGNVDYTATAEELEAH 130
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
F G V+ + IL DKF+G +G AYV+F+D + + A A + +F G+++ +
Sbjct: 131 FHGCGCVNRVTILCDKFSGHPKGFAYVEFVDKDSVQTAQALDDSLFKGRQIKV 183
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F I L+AT D+ FFS G V +RI+ D+ + +SRG+ YV+F D + A
Sbjct: 180 DQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMA 239
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q LG+ + + S
Sbjct: 240 IALSGQPLLGQPVMVKPS 257
>gi|281209044|gb|EFA83219.1| polyadenylate-binding protein 2 [Polysphondylium pallidum PN500]
Length = 202
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA---FLSNINLKATYEDLRRFFSDVGGV 418
R K+ EE K ++++V G +E A ++ N+ +T ED+ +F G V
Sbjct: 51 RRYKEMEEETKKLNELQNSVDSNGFGDQEEIDARSVYVGNVEYTSTQEDILAYFQSCGTV 110
Query: 419 SSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
+ I IL+DK TG +G YV+F+D E + A+ N F +++ +
Sbjct: 111 NRITILNDKTTGHPKGCCYVEFVDRESVQNALVLNDTTFNNRQIKVT 157
>gi|71013016|ref|XP_758548.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
gi|46098206|gb|EAK83439.1| hypothetical protein UM02401.1 [Ustilago maydis 521]
Length = 204
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ AT E++++ F G ++ + IL DKFTG +G AYV+F + +A A+ N+
Sbjct: 98 YVGNVDYGATPEEVQQHFQSCGTINRVTILCDKFTGHPKGFAYVEFAEPSLVANAMVLNE 157
Query: 455 QMFLGK--KLSIARSN 468
+F G+ K++ R+N
Sbjct: 158 SLFRGRLIKVTAKRTN 173
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F I L+AT D+ FFS G V +RI+ D+ + +SRG+ YV+F D + A
Sbjct: 180 DQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMA 239
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q LG+ + + S
Sbjct: 240 IALSGQPLLGQPVMVKPS 257
>gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii]
Length = 255
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT ++L++ F G ++ I I +KFTG +G AY++F D ++ A
Sbjct: 122 DNRSVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEFSDASYVPQA 181
Query: 450 VAKNKQMFLGKKLSIA 465
++ N +F G+ L I+
Sbjct: 182 LSLNDSLFKGRNLKIS 197
>gi|380491263|emb|CCF35443.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 203
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 77 DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQA 136
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ + +
Sbjct: 137 LVLNESVFKGRNIKVV 152
>gi|353235207|emb|CCA67223.1| related to poly(a) binding protein II [Piriformospora indica DSM
11827]
Length = 173
Score = 58.5 bits (140), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+++ F+ G ++ + IL DKFTG +G AYV+F H+ AA
Sbjct: 88 DARSIYVGNVDYGATPEEIQAHFASCGTINRVTILLDKFTGHPKGYAYVEFAQPAHVEAA 147
Query: 450 VAKNKQMFLGKKLSIARS 467
+ N+ +F G+ + + RS
Sbjct: 148 LVLNESLFRGRLIKVGRS 165
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F I L+AT D+ FFS G V +RI+ D+ + +SRG+ YV+F D + A
Sbjct: 229 DQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMA 288
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q LG+ + + S
Sbjct: 289 IALSGQPLLGQPVMVKPS 306
>gi|398337153|ref|ZP_10521858.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
gi|398339344|ref|ZP_10524047.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418679408|ref|ZP_13240671.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686673|ref|ZP_13247838.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418742090|ref|ZP_13298463.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421090342|ref|ZP_15551136.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|421107449|ref|ZP_15568001.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|421132619|ref|ZP_15592785.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|400320299|gb|EJO68170.1| hypothetical protein LEP1GSC044_2501 [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410000920|gb|EKO51546.1| hypothetical protein LEP1GSC131_0332 [Leptospira kirschneri str.
200802841]
gi|410007465|gb|EKO61175.1| hypothetical protein LEP1GSC082_3004 [Leptospira kirschneri str.
H2]
gi|410356002|gb|EKP03377.1| hypothetical protein LEP1GSC018_3276 [Leptospira kirschneri str.
2008720114]
gi|410738744|gb|EKQ83477.1| hypothetical protein LEP1GSC064_2382 [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410750448|gb|EKR07428.1| hypothetical protein LEP1GSC122_3008 [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 91
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID-DEHLAAAVAKN 453
++ N+ +AT +DLR+ F G V+S+RI+ DK +GKSRGLA+V+ + DE AA N
Sbjct: 4 YIGNLAYQATEDDLRKAFESFGEVTSVRIITDKLSGKSRGLAFVEMANKDEGNAAIDGLN 63
Query: 454 KQMFLGKKLSIARSNPKQ 471
G+++ + + PK+
Sbjct: 64 GTQIRGREIKVNEALPKK 81
>gi|353241722|emb|CCA73517.1| hypothetical protein PIIN_07470 [Piriformospora indica DSM 11827]
Length = 1156
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 173/441 (39%), Gaps = 44/441 (9%)
Query: 58 DLWLDYTQYLDKTLK--VGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEE---- 111
DLW++Y Y KTLK + + + RAT+ P GE W + +ER +S E
Sbjct: 333 DLWMEYLVYNQKTLKDEERSQLSTLAKRATRCIPEHGEAWSFYMREIERVNSSSSEDMET 392
Query: 112 --------ISTVFEKSLLCAF--STFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIR 161
+ ++ + + ++ E+ + + ++R +RR+ E +D +
Sbjct: 393 EEANSTETVPDIYSRLVAMNLLQNSIEDLVVVAISRASWGKRRVFIQEGEETAIDQDQMG 452
Query: 162 ETFQRASDYLS--EQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEA 219
E Q + ++ Q + D +RL + + S+G S K A
Sbjct: 453 EIIQVLEEAIATIRQKEGGDPKMRLEMFLSAFYSSLGIPE-SGLETLNSACKFYKTSYLA 511
Query: 220 WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDH--SV 277
W +Y+ I + I EAR ++K S+R E I W+ FE ++G+LE+ +H S
Sbjct: 512 WLNYVDRLISANQIVEARRVFKDA-SQRKGLDWPEMIWERWVSFEYQFGSLEEIEHALSA 570
Query: 278 QKVTPRLEELRLFRSQQE--------------SKSLPESADQKEHSVKKTGREKRKSDSN 323
K R E+ R ++ Q + +L E A S+ + ++
Sbjct: 571 TKDFKRREDARRQKAWQAQAYAQIPVSQGHVPASALVEHASNGMGSMAQANGHMEVDATH 630
Query: 324 ISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG 383
+ P KR++ + H +K + AE E PK Q +A
Sbjct: 631 AAVIDRPLKRKRSEDEIVVDAHSPKKPRPDGPAEST---EMDVAASSPPKSQAGAEAALK 687
Query: 384 RTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDD 443
R F L E+ +R + IR + K + +A V+F++
Sbjct: 688 RQVPLAQ----FTIKTYLCTETENGQRCWCPNYRCGEIREVAVKEL-PNELVATVEFMEK 742
Query: 444 EHLAAAVAKNKQMFLGKKLSI 464
E + AA+ K+K+ G ++S+
Sbjct: 743 ESIPAALTKDKKRIHGVEVSV 763
>gi|336466383|gb|EGO54548.1| hypothetical protein NEUTE1DRAFT_69316 [Neurospora tetrasperma FGSC
2508]
Length = 229
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 98 DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQA 157
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ + +
Sbjct: 158 LVLNESVFKGRNIKVV 173
>gi|164426633|ref|XP_957585.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
gi|157071415|gb|EAA28349.2| polyadenylate-binding protein 2 [Neurospora crassa OR74A]
Length = 229
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 98 DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQA 157
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ + +
Sbjct: 158 LVLNESVFKGRNIKVV 173
>gi|67536962|ref|XP_662255.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
gi|40741263|gb|EAA60453.1| hypothetical protein AN4651.2 [Aspergillus nidulans FGSC A4]
Length = 1639
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYS---RATKNCPWVGELWVRS 98
+ +Y+RA+ F +++W DY +L GN S RAT++CP G LW +
Sbjct: 488 INAIYQRAVLRFQTDANIWEDYIMFLIDESMHGNAHPTTISALDRATRHCPGSGTLWSQY 547
Query: 99 LLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEVEGVL 155
LLS ER +I+ + K+ L EE L + LRRR S + L
Sbjct: 548 LLSSEREGQPFTKIADIKHKATSTGLLDVGGMEEVLKVHTAWCSYLRRRAFLSEATDEDL 607
Query: 156 DYSLIR-----ETFQRASDYLSEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSARGVWERL 209
D + + E+ Q + + D L RL Y +L +S D SAR ++ L
Sbjct: 608 DVAEVGIRSAIESVQELGEKKYGRSYEGDPLFRLERIYIRYLSESGSWD--SARETFKGL 665
Query: 210 LKISGAMLEAWQSYISMEI 228
+ G E W +Y E+
Sbjct: 666 MGRRGNSYEFWLTYYHWEL 684
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 396 LSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ 455
+SN+N A+ +DL+ FS G V +R L K G S+G YV F E AA+A ++Q
Sbjct: 999 VSNVNWSASEDDLKELFSRFGTVELVR-LPRKVDGGSKGFGYVVFSSKEEATAALAMHEQ 1057
Query: 456 MFLGKKLSIARSNPKQRK 473
F G+ L + S P+ K
Sbjct: 1058 EFRGRPLHVKVSAPQGAK 1075
>gi|429860717|gb|ELA35441.1| rnp domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 218
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE RE + ++ +Q + D K D + F+ N++ A+ E+
Sbjct: 53 KRRVAEMEEEAAKLREMQASLNQQAQDLNTDD------KQDVDSRSIFVGNVDYSASPEE 106
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 107 IQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQALVLNESIFKGRNIKVV 164
>gi|358056102|dbj|GAA97956.1| hypothetical protein E5Q_04636 [Mixia osmundae IAM 14324]
Length = 203
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L++ F D G ++ + IL DKFT +G AYV+F + +A A
Sbjct: 78 DSRSIYVGNVDYGATPEELQQLFKDCGTINRVTILCDKFTRHPKGFAYVEFSEPTFVANA 137
Query: 450 VAKNKQMFLGKKLSI 464
++ N+ +F G+ + +
Sbjct: 138 ISMNETLFRGRMILV 152
>gi|344242620|gb|EGV98723.1| Polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 244
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 80 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 139
Query: 449 AVAKNKQMFLGKKLSIA 465
++A ++ +F G+++ ++
Sbjct: 140 SLALDESLFRGRQIKVS 156
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ T +DL FS G ++ I IL DKF+G +G AY++F + + AA
Sbjct: 91 DKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAA 150
Query: 450 VAKNKQMFLGKKLSI 464
V ++ +F G+ + +
Sbjct: 151 VTMDETVFRGRTIKV 165
>gi|295668567|ref|XP_002794832.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285525|gb|EEH41091.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1381
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-----DKTLKVGNVVRDVYS--RATKNCPWVGEL 94
V LY+RA+ FP+ LW DY +L ++ + + ++ S RAT++CPW G L
Sbjct: 515 VCALYQRAVLRFPIDVTLWEDYIMFLVEESMNQRGRHNAYIPNLPSLERATRHCPWSGSL 574
Query: 95 WVRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRR 144
W + +LS ER+ S +I+ V K+ L +E + + T LRRR
Sbjct: 575 WSQRILSAERAGLSFTQIADVKHKATRTGLLDTGGVDEVIKVHTTWCSYLRRR 627
>gi|170592979|ref|XP_001901242.1| pabpn1-prov protein [Brugia malayi]
gi|158591309|gb|EDP29922.1| pabpn1-prov protein, putative [Brugia malayi]
Length = 219
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ +T E+L F G V+ + IL DKFTG +G AY++F D E + A
Sbjct: 89 DSRSVYVGNVDYCSTAEELEAHFHGCGSVNRVTILTDKFTGHPKGFAYIEFADKEAVQTA 148
Query: 450 VAKNKQMFLGKKL 462
+A ++ +F G+++
Sbjct: 149 LALDESLFRGRQI 161
>gi|164662126|ref|XP_001732185.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
gi|159106087|gb|EDP44971.1| hypothetical protein MGL_0778 [Malassezia globosa CBS 7966]
Length = 215
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 307 EHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQ 366
E+ V GRE D++I + + K +++++ +R + A
Sbjct: 27 ENDVANEGREADAEDADIEAMKRRVAEMEAEAAKLREMNEVAERDISGTA---------- 76
Query: 367 TVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHD 426
+ P ++ K V GR+ ++ N++ AT E++++ F G ++ + IL D
Sbjct: 77 SAASHPSEEE-KMEVDGRS--------IYVGNVDYGATPEEIQQHFQSCGTINRVTILCD 127
Query: 427 KFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
KFTG +G AYV+F D + A N+ +F G+ L +
Sbjct: 128 KFTGHPKGFAYVEFADSSFVENAAVLNESLFRGRLLKV 165
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
+QP + P + D C F+ +N + T E LR +F+ G V ++I+ D TG+SR
Sbjct: 138 QQPADSSRPVKADLSKDSCKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSR 197
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
G ++ F +D V K + + GK + R+ P++ +D +G
Sbjct: 198 GFGFLTF-EDATSVDEVVKTQHILDGKVIDPKRAIPREEQDKTG 240
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG +V + D V +NK
Sbjct: 243 FVGGIGADVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTY-DSPDAVDRVCQNK 301
Query: 455 QM-FLGKKLSIARSNPK 470
+ F GK++ I R+ P+
Sbjct: 302 FIEFKGKQIEIKRAEPR 318
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 138 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 197
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 198 SLALDESLFRGRQIKV 213
>gi|427783563|gb|JAA57233.1| Putative splicing factor sc35 [Rhipicephalus pulchellus]
Length = 214
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA-AAVA 451
T ++SN+ K T DL + F G V+ + ++ DK T KS+G+A+V F+D E + A A
Sbjct: 11 TVYVSNLPFKLTNNDLHQIFEKYGKVAKVTVMKDKQTWKSKGVAFVLFMDPESASKCASA 70
Query: 452 KNKQMFLGKKL--SIARSN 468
N Q+ +G+ L SIA+ N
Sbjct: 71 LNNQLLMGRTLRASIAKYN 89
>gi|28059803|gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 527
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 166 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 225
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+FLG+ + + S
Sbjct: 226 IALSGQLFLGQPVMVKPS 243
>gi|348679138|gb|EGZ18955.1| hypothetical protein PHYSODRAFT_409429 [Phytophthora sojae]
Length = 167
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 351 QVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRR 410
++Q+ E G+ T T+ E A P + D+ + ++ ++ +T E+L+
Sbjct: 41 EMQSEVESQMGKNTASTLNEMGAAGAAASAQPVQM----DDTSIYIGQVDYGSTPEELQA 96
Query: 411 FFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
F G ++ + IL DKFTG+ +G AY++F + + +A+ N MF G++L +
Sbjct: 97 LFQSCGTINRVTILCDKFTGQPKGYAYIEFASRDAVESALLLNDTMFRGRQLKV 150
>gi|18416114|ref|NP_568220.1| RNA-binding protein 39 [Arabidopsis thaliana]
gi|15451046|gb|AAK96794.1| splicing factor-like protein [Arabidopsis thaliana]
gi|332004077|gb|AED91460.1| RNA-binding protein 39 [Arabidopsis thaliana]
Length = 527
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 166 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 225
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+FLG+ + + S
Sbjct: 226 IALSGQLFLGQPVMVKPS 243
>gi|392592926|gb|EIW82252.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 197
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+++ F G ++ + IL DKFTG +G AYV+F + + + A
Sbjct: 80 ADSRSVYVGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGFAYVEFAEPDFIDA 139
Query: 449 AVAKNKQMFLGK--KLSIARSN 468
A+A + +F G+ K++ R+N
Sbjct: 140 ALAMDNSLFRGRLIKVTAKRTN 161
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKFTG +G AY+++ D + +
Sbjct: 98 VDARSVYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEYADKDSVQT 157
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 158 SLALDESLFKGRQIKV 173
>gi|320586503|gb|EFW99173.1| rnp domain containing protein [Grosmannia clavigera kw1407]
Length = 194
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
KR+V + EE RE ++ E Q Q + D K D + F+ N++ A+ E+
Sbjct: 31 KRRVAEMEEEAARLREMQKDTEHQ--SQELAD-----NKEDVDSRSIFVGNVDYSASPEE 83
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA-- 465
++ F G ++ + IL DKFTG+ +G AYV+F + +A A+ N+ +F G+ + +
Sbjct: 84 IQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPSLVAQALVLNESVFKGRNIKVVPK 143
Query: 466 RSN 468
R+N
Sbjct: 144 RTN 146
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 71 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 130
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
++A ++ +F G+++ + + S+ +R +A+ +T N +S S+ +
Sbjct: 131 SLALDESLFRGRQIKVIPKRTNRPGISTTDRG-FPRARYRARTTNYNSSRSR---FYSGF 186
Query: 509 QSRGRGDSVQLKGKNT 524
SR RG + + + T
Sbjct: 187 NSRPRGRVYRGRARAT 202
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P +QPI + P D T F + + DL FFS VG V +R++ D+
Sbjct: 131 EKSPVRQPIDNLTPEER----DARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRN 186
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AY++F++ + A+ + Q LG + + S K+ + A ++
Sbjct: 187 SRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAEKNRAAAMA------NN 240
Query: 489 QQTGNAG 495
Q GNAG
Sbjct: 241 LQKGNAG 247
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE 444
KG ++ +++ T E LR F G + SI+++ D TG+S+G ++ F D E
Sbjct: 243 KGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTE 301
>gi|195476890|ref|XP_002100023.1| GE16818 [Drosophila yakuba]
gi|194187547|gb|EDX01131.1| GE16818 [Drosophila yakuba]
Length = 903
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 112/570 (19%), Positives = 217/570 (38%), Gaps = 63/570 (11%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL------------DKTLKVG-------------NV 76
++ ++ER++ FP+ LWL Y +++ D+T ++ N
Sbjct: 348 IRFIFERSVAKFPIVDVLWLSYIEFIQGSDGGCVAEEDDETAELTAKRASRLGKGYLRNT 407
Query: 77 VRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLT 136
D+ R ++ P V +L R L +ER+ + E+ L + ++L L
Sbjct: 408 ALDLAKRGVRSRPSV-QLNHRYLDLMERADFEQPEVEQQIRAILQRIVPDMDMTVELHLD 466
Query: 137 RIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQSM 195
+ R E + + +R F R + LS + D + WA +E +
Sbjct: 467 YLAYCVRNTNAGDEQQA----ASLRAAFNRVWEELSALYGDEADTRYEVLQLWAQVEYTH 522
Query: 196 GKDMVSARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGS 253
+ +W +++ G+ W + ME E + R + + S+ G
Sbjct: 523 LASPANGWHIWRQIMGYPGSSHRGLLWLGFAQMESEYNAGQGTRDVLREALSQPVLEDGI 582
Query: 254 EDICHAWLRFEREYGTLED------FDHSVQKVTPRLEELRLFRSQQESKSLPESADQKE 307
+ + R+ER YGT E D + + PR R+ + Q + S + Q+
Sbjct: 583 M-VQELYRRYERCYGTYESIAACQALDLPAEYLKPR---SRIKPNTQPANSRQQKQQQQH 638
Query: 308 HSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLA--EENEGRETK 365
++ ++ ++ + +RQ H Q+ K++ A E + G +
Sbjct: 639 QRRQQQQPRQQTQSNSEPLNREQRRRQAHEQQQQLMQGQKKRPPPTQAAKPETSPGGASP 698
Query: 366 QTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY-----EDLRRFFSDVGGVSS 420
T + + R F ++ I ++ + E+L FS G +
Sbjct: 699 PTSKARGPANAQGSDAETRESNFKYSPNMEINKIFVRNLHPACSKEELHELFSPFGSIKD 758
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVA-KNKQMFLGKKLSIARSNPKQRKDSSGER 479
+R++H K + +G+AYV+F AVA ++ + G +S+A SNP R +S
Sbjct: 759 VRLVH-KLNKQFKGIAYVEFEKPGEAQRAVAGRDGHLLKGMNISVAISNPPPRGSASDVA 817
Query: 480 APTEQAQSHQQTGNAGTS------ASKESSIETSKQSRGRGDSVQLKGKNTFAVPRNVRP 533
P+ + T T+ A+K+ ++ + + + + AV
Sbjct: 818 KPSVAPKRRVPTSLIPTTLVRQEVAAKKRRLQVEPGTSTADAATEHEANGGAAV-----S 872
Query: 534 LGFPAIKPKTEEGEDLKPKSNDEFRKMFIK 563
L + + PKSND+FRK+F+K
Sbjct: 873 LVEQKAEEEPAVAAAAAPKSNDDFRKLFLK 902
>gi|388582273|gb|EIM22578.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 202
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N++ AT EDL++ F+ G ++ + IL DKFTG +G AY++F + + A A
Sbjct: 92 SVYVGNVDYSATPEDLQKHFAACGTINRVTILCDKFTGHPKGYAYIEFAEPSLVENASAL 151
Query: 453 NKQMFLGKKLSIA 465
N+ +F G+ + +
Sbjct: 152 NESLFKGRLIKVV 164
>gi|227206234|dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]
Length = 505
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 144 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 203
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+FLG+ + + S
Sbjct: 204 IALSGQLFLGQPVMVKPS 221
>gi|194379396|dbj|BAG63664.1| unnamed protein product [Homo sapiens]
Length = 527
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 44/336 (13%)
Query: 160 IRETFQRASDYLSEQMK-----NTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISG 214
+R F RA +YL ++++ + D + WA +E + +M AR +W+ ++
Sbjct: 21 LRAAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIEARLCNNMQKARELWDSIMTRGN 80
Query: 215 A-MLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDF 273
A W Y ++E R R + T E +C L ER G+LED+
Sbjct: 81 AKYANMWLEYYNLERAHGDTQHCRKALHRAV--QCTSDYPEHVCEVLLTMERTEGSLEDW 138
Query: 274 DHSVQKVTPRL---EELRLFRSQQESKSL---PESADQKEHSVKKT----------GREK 317
D +VQK RL E R+ +++E+ + E A+Q++ + + G EK
Sbjct: 139 DIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEK 198
Query: 318 RKSDSNISY------EQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQ 371
R +D + E+ P+KR++ P E + V+ +A G+ V E
Sbjct: 199 RGADEDDEKEWGDDEEEQPSKRRRVENSIPAA---GETQNVE-VAAGPAGKCAAVDV-EP 253
Query: 372 PKKQPIKDAVPGR--TKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFT 429
P KQ K A R K D S +++ LR F G V IR +
Sbjct: 254 PSKQKEKAASLKRDMPKVLHD------SKDSMQEPDTKLRPLFEACGEVVQIRPIFSN-R 306
Query: 430 GKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
G RG YV+F +++ A+ +++ G+ + ++
Sbjct: 307 GDFRGYCYVEFKEEKSALQALEMDRKSVEGRPMFVS 342
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+S + T E+L G V +R++ ++ GK +GLAYV++ ++ + AV K
Sbjct: 368 FISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMKMD 426
Query: 455 QMFLGKK-LSIARSNPKQRK 473
M + + + +A SNP QRK
Sbjct: 427 GMTIKENIIKVAISNPPQRK 446
>gi|156399361|ref|XP_001638470.1| predicted protein [Nematostella vectensis]
gi|156225591|gb|EDO46407.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+L + F G V+ + IL DKF+G +G AYV+F D +
Sbjct: 34 KAEVDARSVYVGNVDYSATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYVEFSDKDS 93
Query: 446 LAAAVAKNKQMFLGKKLSIA--RSN 468
+ AV + +F G+++ + R+N
Sbjct: 94 VDNAVLLSDSLFKGRQIKVVLKRTN 118
>gi|336260077|ref|XP_003344835.1| hypothetical protein SMAC_06118 [Sordaria macrospora k-hell]
gi|380089032|emb|CCC12976.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 213
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 80 DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPNLVAQA 139
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ + + R+N
Sbjct: 140 LVLNESVFKGRNIKVVPKRTN 160
>gi|389609797|dbj|BAM18510.1| glycine rich RNA binding protein, putative [Papilio xuthus]
Length = 218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT---------DECTAFLSNI 399
K +V+ + EE E + QT + KQ + PG T D + ++ N+
Sbjct: 48 KARVREMEEEAEKLKQMQT---EVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNV 104
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
+ AT E+L + F G ++ + IL +KF G +G AY++F D + + A+A ++ +F G
Sbjct: 105 DYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLFRG 164
Query: 460 KKLSIARSNPKQRKDSSGERAP 481
+++ + + SS R P
Sbjct: 165 RQIKVMPKRTNKPGLSSTNRPP 186
>gi|321248626|ref|XP_003191185.1| poly(A) binding protein [Cryptococcus gattii WM276]
gi|317457652|gb|ADV19398.1| Poly(A) binding protein, putative [Cryptococcus gattii WM276]
Length = 217
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 356 AEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDV 415
E NE E +EE G + D + F+ N++ AT E+++ F
Sbjct: 75 GETNETHEGDDNMEED-----------GESSEAVDMRSVFIGNVDYGATPEEIQGHFQAC 123
Query: 416 GGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
G ++ + IL DKFTG +G AYV+F + + A+ N+ MF G+ L +
Sbjct: 124 GTINRVTILCDKFTGHPKGYAYVEFAEPSIVQNALVLNESMFRGRMLQV 172
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F D E + +
Sbjct: 161 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTS 220
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 221 LALDESLFRGRQIKV 235
>gi|340939483|gb|EGS20105.1| putative poly(A) binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 211
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ + E+L+ F G ++ + IL DKFTG+ +G AYV+F + +A
Sbjct: 71 VDSRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFAEPSLVAQ 130
Query: 449 AVAKNKQMFLGKKLSIA--RSN 468
A+ N +F G+ + +A R+N
Sbjct: 131 ALVLNDSVFKGRNIKVAPKRTN 152
>gi|301097894|ref|XP_002898041.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
gi|262106486|gb|EEY64538.1| polyadenylate-binding protein 2 [Phytophthora infestans T30-4]
Length = 225
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ ++ +T E+L+ F G ++ + IL DKFTG+ +G AY++F + + +A
Sbjct: 102 DDTSIYIGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASHDAVESA 161
Query: 450 VAKNKQMFLGKKLSI 464
+ N MF G++L +
Sbjct: 162 LLLNDTMFRGRQLKV 176
>gi|240281788|gb|EER45291.1| RNP domain-containing protein [Ajellomyces capsulatus H143]
Length = 188
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 124 LVLNESVFRGRNLKVVPKRTN 144
>gi|431838574|gb|ELK00506.1| Embryonic polyadenylate-binding protein 2 [Pteropus alecto]
Length = 308
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 331 AKRQKHAPQKPKK--VHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGF 388
A Q P+ P+ + +KE+ LA++ ET + P + K
Sbjct: 134 AMEQAQGPEPPRAQALAEKEESSGAMLAQQLLSPETGRPYPGTPVE-----------KME 182
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ T ++L +F+ G V + IL DKF+G +G AYV+F + + A
Sbjct: 183 VDHRSIYVGNVDYGGTAKELEAYFNHCGEVQRVTILCDKFSGHPKGYAYVEFASESSVQA 242
Query: 449 AVAKNKQMFLGK--KLSIARSNPKQRKDS 475
AV ++ +F G+ K+ + +P +D+
Sbjct: 243 AVELDESIFRGRVIKVHVPHESPGHLEDA 271
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 52 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 111
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 112 SLALDESLFRGRQIKV 127
>gi|212528088|ref|XP_002144201.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
gi|210073599|gb|EEA27686.1| RNP domain protein [Talaromyces marneffei ATCC 18224]
Length = 190
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSI 464
+ N+ +F G+ L +
Sbjct: 125 LVLNESVFRGRNLKV 139
>gi|154341861|ref|XP_001566882.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064207|emb|CAM40405.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 214
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDL 408
KRQV +L E+ + + +++ + + A G + + F+ +++L+ T DL
Sbjct: 33 KRQVDSLQEDMQLKALQESAAKDEGTRKTAAAAGGSSGQARTNTSIFVGDLDLRTTDADL 92
Query: 409 RRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
R FF+ G ++ + +L D+ G +G AYV+F + AAV K+ Q GK L +A
Sbjct: 93 RVFFASCGAITRVTVLKDR-QGNPKGTAYVEFETEAQAQAAVLKDGQSLHGKPLRVA 148
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 52 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 111
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 112 SLALDESLFRGRQIKV 127
>gi|428173619|gb|EKX42520.1| hypothetical protein GUITHDRAFT_88058 [Guillardia theta CCMP2712]
Length = 213
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F+D G +++I I DKFTG+++G AY++F D + A
Sbjct: 89 DSRSIFIGNVDFAASVEEVQALFADCGEINAITIPVDKFTGRAKGFAYLEFADKASVLMA 148
Query: 450 VAKNKQMFLGKKLSI 464
+ KN + + + +
Sbjct: 149 MEKNNALLRDRAIKV 163
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 57 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 116
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 117 SLALDESLFRGRQIKV 132
>gi|11359595|pir||T49743 probable rrm-type rna binding protein [imported] - Neurospora
crassa
gi|40882336|emb|CAF06158.1| probable RRM-type RNA binding protein [Neurospora crassa]
Length = 215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 84 DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQA 143
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ + +
Sbjct: 144 LVLNESVFKGRNIKVV 159
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 136 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 195
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 196 SLALDESLFRGRQIKV 211
>gi|350286752|gb|EGZ67999.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 84 DSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQA 143
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ + +
Sbjct: 144 LVLNESVFKGRNIKVV 159
>gi|443723317|gb|ELU11799.1| hypothetical protein CAPTEDRAFT_18178 [Capitella teleta]
Length = 157
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ IL DKF+G +G AYV+F+D + +
Sbjct: 41 ADSRSIWIGNVDYAATAEELGSHFHGCGSVNRATILCDKFSGHPKGFAYVEFVDKDSVET 100
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPT 482
A A + +F G+++ + + SS R P+
Sbjct: 101 AQALDDSLFKGRQIKVTPKRTNRPGISSTNRPPS 134
>gi|9758966|dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]
Length = 604
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 166 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 225
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+FLG+ + + S
Sbjct: 226 IALSGQLFLGQPVMVKPS 243
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 169 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 229 SLALDESLFRGRQIKV 244
>gi|295668084|ref|XP_002794591.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225679740|gb|EEH18024.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
gi|226286007|gb|EEH41573.1| hypothetical protein PAAG_03136 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 188
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 124 LVLNESVFRGRNLKVVPKRTN 144
>gi|164651984|gb|ABY64767.1| ePABP2 [Homo sapiens]
Length = 278
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 351 QVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRR 410
+VQ AEE EG Q + + P+ + + D + ++ N++ + E+L
Sbjct: 108 RVQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVE--ADHRSVYVGNVDYGGSAEELEA 165
Query: 411 FFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 166 HFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 219
>gi|242767348|ref|XP_002341352.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
gi|218724548|gb|EED23965.1| RNP domain protein [Talaromyces stipitatus ATCC 10500]
Length = 188
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSI 464
+ N+ +F G+ L +
Sbjct: 125 LVLNESVFRGRNLKV 139
>gi|119184697|ref|XP_001243223.1| hypothetical protein CIMG_07119 [Coccidioides immitis RS]
gi|392866108|gb|EAS28718.2| polyadenylate-binding protein 2 [Coccidioides immitis RS]
Length = 196
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 124 LVLNESLFRGRNLKVVPKRTN 144
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 169 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 229 SLALDESLFRGRQIKV 244
>gi|407928590|gb|EKG21444.1| hypothetical protein MPH_01242 [Macrophomina phaseolina MS6]
Length = 221
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 89 DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 148
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ + + R+N
Sbjct: 149 LVLNESVFRGRNIKVVPKRTN 169
>gi|389614949|dbj|BAM20476.1| glycine rich RNA binding protein, putative [Papilio polytes]
Length = 218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT---------DECTAFLSNI 399
K +V+ + EE E + QT + KQ + PG T D + ++ N+
Sbjct: 48 KARVREMEEEAEKLKQMQT---EVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNV 104
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
+ AT E+L + F G ++ + IL +KF G +G AY++F D + + A+A ++ +F G
Sbjct: 105 DYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLFRG 164
Query: 460 KKLSIARSNPKQRKDSSGERAP 481
+++ + + SS R P
Sbjct: 165 RQIKVMPKRTNKPGLSSTNRPP 186
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 229 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 288
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
++A ++ +F G+++ + + S+ +R +A+ +T N +S S+ S S+
Sbjct: 289 SLALDESLFRGRQIKVIPKRTNRPGISTTDRG-FPRARYRARTTNYNSSRSRFYSGFNSR 347
Query: 509 QSRGR 513
RGR
Sbjct: 348 P-RGR 351
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 169 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 229 SLALDESLFRGRQIKV 244
>gi|398407175|ref|XP_003855053.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
gi|339474937|gb|EGP90029.1| hypothetical protein MYCGRDRAFT_108180 [Zymoseptoria tritici
IPO323]
Length = 566
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
TA L N++ T D+ F SD V+++RI+ DK K +G YV+F E L A+ K
Sbjct: 102 TAHLGNLDYNVTSVDIEEFLSDCS-VTTVRIMEDKVDRKPKGFGYVEFGSPEGLRQALTK 160
Query: 453 NKQMFLGKKLSIARSNPKQ 471
++ F+G+ + I+ ++P +
Sbjct: 161 SESSFMGRNIKISVADPPK 179
>gi|312283705|ref|NP_001073956.2| embryonic polyadenylate-binding protein 2 [Homo sapiens]
gi|205716472|sp|A6NDY0.1|EPAB2_HUMAN RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
Length = 278
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
VQ AEE EG Q + + P+ + + D + ++ N++ + E+L
Sbjct: 109 VQQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVE--ADHRSVYVGNVDYGGSAEELEAH 166
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 167 FSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 219
>gi|261205936|ref|XP_002627705.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239592764|gb|EEQ75345.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239611077|gb|EEQ88064.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327350679|gb|EGE79536.1| RNP domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 189
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 124 LVLNESVFRGRNLKVVPKRTN 144
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E + +
Sbjct: 42 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 101
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 102 LALDESLFRGRQIKV 116
>gi|62858583|ref|NP_001016352.1| poly(A) binding protein, nuclear 1-like (cytoplasmic) [Xenopus
(Silurana) tropicalis]
gi|89266764|emb|CAJ81799.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|111305754|gb|AAI21547.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 218
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ T +DL FS G ++ I IL DKF+G +G AY++F + + A
Sbjct: 91 DKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDVA 150
Query: 450 VAKNKQMFLGKKLSI 464
VA ++ +F G+ + +
Sbjct: 151 VAMDETVFRGRTIKV 165
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 169 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 229 SLALDESLFRGRQIKV 244
>gi|417409509|gb|JAA51255.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 303
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 138 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 197
Query: 449 AVAKNKQMFLGKKLSIA 465
++A ++ +F G+++ ++
Sbjct: 198 SLALDESLFRGRQIKVS 214
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F I L+AT D+ FFS G V +RI+ D+ + +SRG+ YV+F D + A
Sbjct: 39 DQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMA 98
Query: 450 VAKNKQMFLGKKLSI 464
+A + Q LG+ + +
Sbjct: 99 IALSGQPLLGQPVMV 113
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 165 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 224
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 225 SLALDESLFRGRQIKV 240
>gi|303320527|ref|XP_003070263.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109949|gb|EER28118.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320041356|gb|EFW23289.1| hypothetical protein CPSG_01188 [Coccidioides posadasii str.
Silveira]
Length = 196
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 124 LVLNESLFRGRNLKVVPKRTN 144
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 165 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 224
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 225 SLALDESLFRGRQIKV 240
>gi|297811089|ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319265|gb|EFH49687.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 520
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 160 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 219
Query: 450 VAKNKQMFLGKKLSI----ARSNPKQRKDSSGERAPTEQ 484
+A + Q FLG+ + + A N Q + G P ++
Sbjct: 220 IALSGQPFLGQPVMVKPSEAEKNLAQSNTTPGGTGPVDR 258
>gi|125542191|gb|EAY88330.1| hypothetical protein OsI_09789 [Oryza sativa Indica Group]
Length = 252
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 361 GRETKQTVEEQ--PKKQPIKDAVPGRTKGFTDEC-TAFLSNINLKATYEDLRRFFSDVGG 417
G + K+TVE Q PKK D C +A++ N+ T DLR FF +
Sbjct: 153 GSKRKRTVEFQTDPKK--------------ADGCLSAYVGNLKWDVTETDLRDFFKSLK- 197
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSN 468
+SSIR +K TG SRG +VDF DDE L AV N+ G+ K+S A SN
Sbjct: 198 ISSIRFAINKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPIKISYAVSN 250
>gi|116310267|emb|CAH67273.1| B0806H07.2 [Oryza sativa Indica Group]
gi|116310423|emb|CAH67430.1| H0305E08.1 [Oryza sativa Indica Group]
Length = 690
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 322 SNISYEQSPAKRQKHA----PQKPKKV-HDKEKRQVQNLAEENEGRETKQT--------- 367
+NI+++ + +++A PQ P ++ H ++ LA N T ++
Sbjct: 430 NNITHKPANQATRRNAVKIEPQVPTEMKHTDSRKSTATLAHVNNTPMTDKSKDSMCSSSM 489
Query: 368 VEEQPKKQP---IKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRIL 424
VEEQ K P + G+ +G TD T FLSN++ AT + L R F+ G V I+
Sbjct: 490 VEEQ--KLPSLAVGSCSTGQPEGGTDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIV 547
Query: 425 HDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
D G+ G AY++F+ E A+ + F+ + L + R N + SG
Sbjct: 548 TD-IAGQPTGSAYIEFLHKESAEQALTLDNTSFMSRMLKVVRKNSLEVSQQSG 599
>gi|354557963|ref|ZP_08977220.1| RNP-1 like RNA-binding protein [Desulfitobacterium metallireducens
DSM 15288]
gi|353549637|gb|EHC19078.1| RNP-1 like RNA-binding protein [Desulfitobacterium metallireducens
DSM 15288]
Length = 84
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T ++ N+ T EDL FF G V S RI+ D+ TG+SRG +V+ DD+ A
Sbjct: 4 TLYVGNLPWNTTTEDLTSFFGQYGEVVSSRIITDRETGRSRGFGFVEVEDDDAERMAQDL 63
Query: 453 NKQMFLGKKLSIARSNPKQR 472
N + F G+ L++ + PKQ+
Sbjct: 64 NGKDFGGRPLTVNEAKPKQQ 83
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 196 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 255
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 256 SLALDESLFRGRQIKV 271
>gi|320168622|gb|EFW45521.1| RNP domain-containing protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ +T E+++ F+ G V+ + IL DK+TG +G AY++F D + + A
Sbjct: 92 DARSVFVGNVDYSSTPEEVQAHFASCGTVNRVTILVDKYTGHPKGFAYLEFADKDAVNNA 151
Query: 450 VAKNKQMFLGKKLSI 464
++ N +F G++L +
Sbjct: 152 MSLNDTVFRGRQLKV 166
>gi|115450405|ref|NP_001048803.1| Os03g0123200 [Oryza sativa Japonica Group]
gi|25446691|gb|AAN74838.1| Unknown protein [Oryza sativa Japonica Group]
gi|108705923|gb|ABF93718.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113547274|dbj|BAF10717.1| Os03g0123200 [Oryza sativa Japonica Group]
gi|125584746|gb|EAZ25410.1| hypothetical protein OsJ_09226 [Oryza sativa Japonica Group]
gi|215694916|dbj|BAG90107.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 20/113 (17%)
Query: 361 GRETKQTVEEQ--PKKQPIKDAVPGRTKGFTDEC-TAFLSNINLKATYEDLRRFFSDVGG 417
G + K+TVE Q PKK D C +A++ N+ T DLR FF +
Sbjct: 153 GSKRKRTVEFQTDPKK--------------ADGCLSAYVGNLKWDVTETDLRDFFKSLK- 197
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSN 468
+SSIR +K TG SRG +VDF DDE L AV N+ G+ K+S A SN
Sbjct: 198 ISSIRFAINKRTGDSRGFCHVDFEDDESLEKAVGMNQSELRGRPIKISYAVSN 250
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 57.8 bits (138), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L + F G V+ + IL DKF+G +G AY++F D E + A
Sbjct: 9 DARSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVKTA 68
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+A + +F G+++ ++ R+N
Sbjct: 69 MALDDSLFRGRQIKVSPKRTN 89
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 196 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 255
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
++A ++ +F G+++ + + S+ +R +A+ +T N +S S+ S S+
Sbjct: 256 SLALDESLFRGRQIKVIPKRTNRPGISTTDRG-FPRARYRARTTNYNSSRSRFYSGFNSR 314
Query: 509 QSRGR 513
RGR
Sbjct: 315 -PRGR 318
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 151 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 210
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 211 SLALDESLFRGRQIKV 226
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ K++++ + EE RE + VE++ + P AV +K D + F+ N++
Sbjct: 34 DEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGSAVSQESKEEADSRSVFVGNVDYA 93
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G +G AYV+F++ E + A+ N+ G++L
Sbjct: 94 CTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAIQEALLLNETELHGRQL 152
Query: 463 SI 464
+
Sbjct: 153 KV 154
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSI 421
RE+++ E++ +P +A P R D+ T F + LKAT D+ FFS G V +
Sbjct: 208 RESRRMKEKKDTTEP--EADPER-----DQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 260
Query: 422 RILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
R++ D+ + +S+G+ YV+F D + A+A + Q+ LG+ + +
Sbjct: 261 RLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMV 303
>gi|402909310|ref|XP_003917365.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Papio anubis]
Length = 291
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
VQ+ A+E EG Q + + P+ K D + ++ N++ + E+L
Sbjct: 122 VQHQAKEEEGTMAGQLLSPEATGCPLPGTP--EEKVEADHRSVYVGNVDYGGSAEELEAH 179
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 180 FSGCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 232
>gi|402085387|gb|EJT80285.1| polyadenylate-binding protein 2 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 200
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ A+ E+++ F G ++ + IL DKFTG+ +G AYV+F + +A
Sbjct: 72 VDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFTEPSLVAQ 131
Query: 449 AVAKNKQMFLGKKLSI 464
A+ N+ +F G+ + +
Sbjct: 132 ALVLNESVFKGRNIKV 147
>gi|431794924|ref|YP_007221829.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785150|gb|AGA70433.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 83
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N+ T EDL FF G V S RI+ D+ TG+SRG +V+ DD+ A
Sbjct: 2 ATLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDDDASRMAED 61
Query: 452 KNKQMFLGKKLSIARSNPKQR 472
N + F G+ L++ + PKQ+
Sbjct: 62 LNGKDFGGRPLTVNEARPKQQ 82
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 228 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 287
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 288 SLALDESLFRGRQIKV 303
>gi|169763928|ref|XP_001727864.1| polyadenylate-binding protein 2 [Aspergillus oryzae RIB40]
gi|83770892|dbj|BAE61025.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871171|gb|EIT80336.1| splicing factor RNPS1, SR protein superfamily [Aspergillus oryzae
3.042]
Length = 187
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKF+G+ +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSI 464
+ N+ +F G+ L +
Sbjct: 125 LVLNESVFRGRNLKV 139
>gi|255939756|ref|XP_002560647.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585270|emb|CAP92947.1| Pc16g02770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 191
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ A+ E+++ F G ++ + IL DKF+G+ +G AYV+F + +A
Sbjct: 68 IDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQ 127
Query: 449 AVAKNKQMFLGKKLSIA--RSN 468
A+ N+ +F G+ L + R+N
Sbjct: 128 ALVLNESVFRGRNLKVVPKRTN 149
>gi|151555091|gb|AAI48674.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|162319022|gb|AAI56596.1| Similar to poly(A)binding protein nuclear-like 1 [synthetic
construct]
gi|261860988|dbj|BAI47016.1| Embryonic polyadenylate-binding protein 2 [synthetic construct]
Length = 289
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
VQ AEE EG Q + + P+ K D + ++ N++ + E+L
Sbjct: 109 VQQQAEEEEGTAAGQLLSPETVGCPLSGTP--EEKVEADHRSVYVGNVDYGGSAEELEAH 166
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 167 FSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 219
>gi|417399667|gb|JAA46825.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 361
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 196 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 255
Query: 449 AVAKNKQMFLGKKLSIA 465
++A ++ +F G+++ ++
Sbjct: 256 SLALDESLFRGRQIKVS 272
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 356 AEENEGRETKQTVEEQPKK-QPIKDAVPGRTKGF----TDECTAFLSNINLKATYEDLRR 410
AE E ++ Q +EE+ +K + + D+V + +G D+ + ++ +++ +T E+L+
Sbjct: 20 AEIEEMQKKVQEMEEEAEKLKQLTDSVEEQGEGIDREEVDKRSVYIGSVDYGSTPEELQE 79
Query: 411 FFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIAR 466
F G ++ I IL DK++G +G AYV+F D++ + ++ N +F G++L + +
Sbjct: 80 HFKSCGQINRITILVDKYSGHPKGFAYVEFADEQSVQNSLLLNGSLFRGRQLKVMQ 135
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 57 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 116
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 117 SLALDESLFRGRQIKV 132
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 171 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 230
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 231 SLALDESLFRGRQIKV 246
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 24 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 83
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSA 498
+A + Q+ LG+ P K S E+ QS+ +G AG +
Sbjct: 84 IALSGQLLLGQ--------PVMVKPSEAEK---NLVQSNATSGAAGVTG 121
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSI 421
RE+++ E++ +P +A P R D+ T F + LKAT D+ FFS G V +
Sbjct: 208 RESRRMKEKKGTTEP--EADPER-----DQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 260
Query: 422 RILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
R++ D+ + +S+G+ YV+F D + A+A + Q+ LG+ + +
Sbjct: 261 RLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMV 303
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F N++ KA D+ +FFS G V+ +RI++D+ T +S+G+AY++F D ++ A
Sbjct: 134 DTRTVFAYNLSTKADERDIYQFFSKAGTVNDVRIIYDRNTPRSKGMAYIEFADKANITDA 193
Query: 450 VAKNKQMF 457
+A QM
Sbjct: 194 LALTGQML 201
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 201 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 260
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 261 SMALDESLFRGRQIKV 276
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+L F G ++ + IL +KF G +G AY++F D +
Sbjct: 106 KAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDS 165
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQ 471
+ A+A + +F G+++ + NPK+
Sbjct: 166 VNTAMAMDDSLFRGRQIKV---NPKR 188
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 196 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 255
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 256 SLALDESLFRGRQIKV 271
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 165 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 224
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 225 SLALDESLFRGRQIKV 240
>gi|425774334|gb|EKV12642.1| hypothetical protein PDIG_42430 [Penicillium digitatum PHI26]
gi|425777024|gb|EKV15220.1| hypothetical protein PDIP_41010 [Penicillium digitatum Pd1]
Length = 191
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ A+ E+++ F G ++ + IL DKF+G+ +G AYV+F + +A
Sbjct: 68 IDARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFSGQPKGYAYVEFAEPSLVAQ 127
Query: 449 AVAKNKQMFLGKKLSIA--RSN 468
A+ N+ +F G+ L + R+N
Sbjct: 128 ALVLNESVFRGRNLKVVPKRTN 149
>gi|417409417|gb|JAA51214.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 293
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 138 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 197
Query: 449 AVAKNKQMFLGKKLSIA 465
++A ++ +F G+++ ++
Sbjct: 198 SLALDESLFRGRQIKVS 214
>gi|210076154|ref|XP_504024.2| YALI0E16500p [Yarrowia lipolytica]
gi|199426927|emb|CAG79617.2| YALI0E16500p [Yarrowia lipolytica CLIB122]
Length = 184
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT ++L + F G V + IL DKFTG +G AY++F + + +A A
Sbjct: 66 DARSIYVGNVDYGATPQELEKHFEKCGSVQRVTILMDKFTGNPKGYAYIEFAEPKDVAQA 125
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
V N F ++L ++ R+N
Sbjct: 126 VTLNDSEFRQRQLKVSAKRTN 146
>gi|378729234|gb|EHY55693.1| apoptosis regulator BCL-W [Exophiala dermatitidis NIH/UT8656]
Length = 206
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 389 TDECTAFLSNINLKATYEDLR-RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
D + F+ N++ AT E+++ F S G ++ + IL DKFTG +G AYV+F D +A
Sbjct: 64 VDARSIFVGNVDYGATPEEIQAHFASGPGSINRVTILLDKFTGHPKGYAYVEFSDPALVA 123
Query: 448 AAVAKNKQMFLGKKLSIA--RSN 468
A+ N+ +F G+ L + R+N
Sbjct: 124 QALVLNESVFRGRNLKVVPKRTN 146
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 372 PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK 431
P+ P + P + D + ++ N++ AT ++L F+ G V+ + IL D+F+G
Sbjct: 60 PQPGPFYNMTP-EERMDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGH 118
Query: 432 SRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+G AY++F D +AV ++ MF G+ L +
Sbjct: 119 PKGFAYIEFSDRSAAQSAVGLHETMFRGRVLKV 151
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 169 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 228
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 229 SLALDESLFRGRQIKV 244
>gi|325186974|emb|CCA21518.1| polyadenylatebinding protein 2 putative [Albugo laibachii Nc14]
Length = 235
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ ++ +T E+L+ F G ++ + IL DKFTG+ +G AY++F + + +A
Sbjct: 109 DDSSVYVGQVDYGSTPEELQALFQSCGTINRVTILCDKFTGQPKGYAYIEFASKDAVESA 168
Query: 450 VAKNKQMFLGKKLSI 464
+ N MF G++L +
Sbjct: 169 LLLNDTMFRGRQLKV 183
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E + +
Sbjct: 42 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 101
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 102 LALDESLFRGRQIKV 116
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+L F G ++ + IL +KF G +G AY++F D +
Sbjct: 106 KAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDS 165
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQ 471
+ A+A + +F G+++ + NPK+
Sbjct: 166 VNTAMAMDDSLFRGRQIKV---NPKR 188
>gi|428167060|gb|EKX36025.1| hypothetical protein GUITHDRAFT_117814 [Guillardia theta CCMP2712]
Length = 125
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 371 QPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG 430
Q +P + GRT E ++ N+N K + EDL+ FF + G V +++ D+
Sbjct: 16 QEGSRPASNNYSGRTGLLPKEFQIYVGNLNWKVSNEDLKNFFGEFGDVKFAKVVMDRENP 75
Query: 431 -KSRGLAYVDFIDDEHLAAAVAK-NKQMFLGKKLSIARSNPKQRKD 474
+SRG +V F + E AV K +++ F+G+K+ + + P+ ++D
Sbjct: 76 FRSRGFGFVGFANAEQAQNAVEKCDQEEFMGRKIMVNMAKPRVQRD 121
>gi|417399469|gb|JAA46738.1| Putative apoptosis regulator [Desmodus rotundus]
Length = 351
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 47/77 (61%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 196 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 255
Query: 449 AVAKNKQMFLGKKLSIA 465
++A ++ +F G+++ ++
Sbjct: 256 SLALDESLFRGRQIKVS 272
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 167 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 226
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 227 SLALDESLFRGRQIKV 242
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 351 QVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRR 410
QV N + +E RE+ +EE ++Q D + C F+ +N + T + LR
Sbjct: 99 QVSNQTQNSEQRES---IEEANRRQVKADLS-------RENCKMFIGGLNWETTEDGLRE 148
Query: 411 FFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPK 470
+FS G V ++I+ D TG+SRG ++ F D V K + + GK + R+ P+
Sbjct: 149 YFSKYGNVVELKIMKDPNTGRSRGFGFLSF-DAPSSVDEVVKTQHILDGKVIDPKRAIPR 207
Query: 471 QRKDSSG 477
+ +D +G
Sbjct: 208 EEQDKTG 214
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + ++ +FS G + +++ DK TG+SRG +V + D A V +++
Sbjct: 217 FVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTY-DSPDAAEKVCESR 275
Query: 455 -QMFLGKKLSIARSNPKQRKDSSGERA 480
+ F GK++ I R+ P+ ++ +G++A
Sbjct: 276 YREFKGKQIEIKRAEPRHQQKQAGQQA 302
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKGFT-DECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
R K+ + P +Q KD +GF D T F++ + KA DL +FFS+ G V
Sbjct: 128 RYEKEIPDRLPAEQIAKD-----DEGFDRDMRTIFVAQVARKADERDLFQFFSEAGKVVD 182
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+RI+ D T +S+G+AYV+F E AAV K+ Q+ G + + S
Sbjct: 183 VRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQKSGQLLCGFPVVVQAS 229
>gi|86610200|ref|YP_478962.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558742|gb|ABD03699.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 83
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI----DDEHLA 447
T F+ N+N KA+ E+L+ FF V S+ I D+ TG++RG A+VD +DE +
Sbjct: 1 MTIFVGNLNYKASTEELKAFFQQRWNVKSVTIPIDRETGQTRGFAFVDLATEAEEDEAIE 60
Query: 448 AAVAKNKQMFLGKKLSIARSNPKQR 472
+A N Q F+G+ L + R+ P+++
Sbjct: 61 SA---NGQEFMGRPLRLDRARPRRQ 82
>gi|296425243|ref|XP_002842152.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638411|emb|CAZ86343.1| unnamed protein product [Tuber melanosporum]
Length = 190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 63 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 122
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 123 LVLNESVFRGRSLKVVPKRTN 143
>gi|357114300|ref|XP_003558938.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 255
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 390 DEC-TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D C +A++ N++ T +DLR FF ++S+R DK TG SRG ++DF DDE L
Sbjct: 173 DGCLSAYVGNLSWNVTEKDLRDFFKS-SRIASVRFAIDKRTGDSRGFGHIDFEDDESLEK 231
Query: 449 AVAKNKQMFLGKKLSIA 465
AV N+ G+ + IA
Sbjct: 232 AVGMNQSELRGRPVKIA 248
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 235 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 294
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 295 SLALDESLFRGRQIKV 310
>gi|326512286|dbj|BAJ96124.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 390 DEC-TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D C +A++ N++ + +DLR FF ++SIR DK TG SRG +VDF DDE L
Sbjct: 154 DGCLSAYVGNLSWNISEKDLRDFFKS-SRIASIRFAIDKRTGDSRGFCHVDFEDDESLEK 212
Query: 449 AVAKNKQMFLGKKLSIA 465
AV N+ G+ + IA
Sbjct: 213 AVGMNQSELRGRPVKIA 229
>gi|402217494|gb|EJT97574.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 356 AEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDV 415
A++ G E +P + + V G + D+ + ++ N++ AT D+ F+
Sbjct: 58 AQDGAGTPVPAPKEGEPNGEHEEIQVEGEAQEDVDKRSVYVGNVDYSATPTDISNHFASC 117
Query: 416 GGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSN 468
G ++ + I+ DKF+G +G Y++F + E + A+ N+ M G+ +S+ R+N
Sbjct: 118 GQINRVTIVCDKFSGHPKGFCYIEFAEPETVQNALLLNESMLCGRIISVVAKRTN 172
>gi|541310|pir||S41505 12RNP2 protein - Synechococcus sp. (PCC 6301)
gi|961511|dbj|BAA09863.1| 12kDa RNA-binding, 12RNP2 [Synechococcus elongatus PCC 7942]
Length = 100
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT ED+R F++ G VS + + D+ TG+ RG A+++ +D H AA++
Sbjct: 1 MTIYVGNLSFRATEEDVREVFAEYGPVSRVSLPDDRETGRLRGFAFIEMEEDAHEDAAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPK 470
+ + + G++L ++++ PK
Sbjct: 61 ELDGAEWFGRQLRVSKARPK 80
>gi|395748220|ref|XP_003778730.1| PREDICTED: LOW QUALITY PROTEIN: embryonic polyadenylate-binding
protein 2 [Pongo abelii]
Length = 278
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDEC--TAFLSNINLKATYEDLR 409
VQ+ AEE EG +Q + + P+ PG + + + ++ N++ + E+L
Sbjct: 109 VQHQAEEEEGTVARQLLSPETMGCPL----PGTPEEKVEAXHRSVYVGNVDYGGSAEELE 164
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNP 469
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 165 AHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKRSVQAAVELDQSLFRGRVIKVLPKRT 224
Query: 470 KQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRG 514
SS +R Q + +S + + Q+R RG
Sbjct: 225 NFPGISSTDRGGLRGHQGSRGAPFPHSSLQGRPRLRSRGQNRARG 269
>gi|50303899|ref|XP_451897.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641029|emb|CAH02290.1| KLLA0B08239p [Kluyveromyces lactis]
Length = 1729
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 35/247 (14%)
Query: 46 YERAITDFPVSSDLWLDYTQYLDKTLKVGNV--VRDVYSRATKNCPWVGE-----LWVRS 98
+ER I P SS +W++Y + L++ V R++ RA K + E +W+ S
Sbjct: 1465 FERLIMGNPNSSVVWMNYMAF---HLQLSEVEKAREIVERALKTINFREESEKLNIWIAS 1521
Query: 99 LLSLERSRASEEEISTVFEKSL--LCAFSTFEEYLDLF-----------LTRID----GL 141
L +LE + +EE + VF K+ + +F+ + L ++ L +I G
Sbjct: 1522 L-NLENTFGTEETVEDVFTKACQYMDSFTMHMKLLSIYQMSEKIEKAKELFKITAKKFGS 1580
Query: 142 RRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN--TDGLLRLYAYWAHLEQSMGKDM 199
+ ++ E ++D +LI E A + L +K+ T + + +A LE S G D
Sbjct: 1581 EKVSIWVAWGEFLIDNNLIDE----AHEVLGNSLKSLPTRNHIEVVRKFAQLEFSKG-DP 1635
Query: 200 VSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHA 259
R ++E LL + ++ W YI EI+ ++A +++R +K+ T ++ +
Sbjct: 1636 EQGRSLFEGLLADAPKRVDLWNVYIDQEIKHGEKSKAEDLFERVITKKITRKQAKFFFNK 1695
Query: 260 WLRFERE 266
WL+FE +
Sbjct: 1696 WLQFEEQ 1702
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ T + N++LKA D+ FFS+V G V I+ + D+ +GKS+G+AYV+F E +
Sbjct: 485 DDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVIK 544
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQ 489
A+A N M + + I + S E+ +A HQ
Sbjct: 545 ALAANGMMLKNRPIKI--------QSSQAEKNRAAKAAKHQ 577
>gi|225678691|gb|EEH16975.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 1337
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-----DKTLKVGNVVRDVYS--RATKNCPWVGEL 94
V LY+RA+ FP W DY +L ++ + + ++ S RAT++CPW G L
Sbjct: 525 VCALYQRAVLRFPTDVTFWEDYIMFLVEESMNQRGRHNAYIPNLPSLERATRHCPWSGSL 584
Query: 95 WVRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRRILFSGEV 151
W + +LS ER+ S +I+ V K+ L +E + + T LRRR
Sbjct: 585 WSQHILSAERAGRSFTQIADVKHKATRTGLLDTGGVDEVIKVHTTWCSYLRRRGFQPDST 644
Query: 152 EGVLDYSLIRETFQRASDYL-------SEQMKNTDGLLRL-YAYWAHLEQSMGKDMVSAR 203
+ LD + + E + S D L RL Y +L +S D SAR
Sbjct: 645 DEDLDVAELGERHNNTDNKTKNNNDKSSTPPPPNDPLFRLERIYIRYLSESGSWD--SAR 702
Query: 204 GVWERLLKISGAMLEAWQSYISMEI 228
++ L G E W Y + E+
Sbjct: 703 ETFKSLATRHGHSYEFWLLYYTWEL 727
>gi|328725437|ref|XP_003248478.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Acyrthosiphon pisum]
Length = 329
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+L F G ++ + IL +KF G +G AY++F D +
Sbjct: 189 KAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKGFAYIEFADMDS 248
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQ 471
+ A+A + +F G+++ + NPK+
Sbjct: 249 VNTAMAMDDSLFRGRQIKV---NPKR 271
>gi|331215415|ref|XP_003320388.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299378|gb|EFP75969.1| apoptosis regulator BCL-W [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 195
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ +T E+++ F+ G ++ I IL DKFTG+ +G AY++F D
Sbjct: 75 KEVVDSRSVYVGNVDYGSTAEEIQAHFASCGTINRITILCDKFTGQPKGFAYIEFADPML 134
Query: 446 LAAAVAKNKQMFLGKKLSIA--RSN 468
+ A N +F G+++ + R+N
Sbjct: 135 VPQACLLNDSLFRGRQIKVTPKRTN 159
>gi|150007582|ref|YP_001302325.1| RNA-binding protein rbpA [Parabacteroides distasonis ATCC 8503]
gi|255013892|ref|ZP_05286018.1| putative RNA-binding protein rbpA [Bacteroides sp. 2_1_7]
gi|298375526|ref|ZP_06985483.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|410101874|ref|ZP_11296802.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
gi|423331931|ref|ZP_17309715.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|149936006|gb|ABR42703.1| putative RNA-binding protein rbpA [Parabacteroides distasonis ATCC
8503]
gi|298268026|gb|EFI09682.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides sp.
3_1_19]
gi|409229772|gb|EKN22644.1| hypothetical protein HMPREF1075_01728 [Parabacteroides distasonis
CL03T12C09]
gi|409239672|gb|EKN32456.1| hypothetical protein HMPREF0999_00574 [Parabacteroides sp. D25]
Length = 123
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++SN++ + EDLR F+D G ++S +++ D+ TG+SRG +V+ DDE A+ + N
Sbjct: 4 YISNLSYNISDEDLRLLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEELN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGER 479
+ + GK ++I + P++ + G R
Sbjct: 64 QASYDGKVINITEARPREDRGDRGGR 89
>gi|38344812|emb|CAE02868.2| OSJNBb0022F23.5 [Oryza sativa Japonica Group]
Length = 690
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 338 PQKPKKV-HDKEKRQVQNLAEENEGRETKQT---------VEEQPKKQP---IKDAVPGR 384
PQ P ++ H ++ LA N T ++ VEEQ K P + G+
Sbjct: 450 PQVPTEMKHTDSRKSTATLAHVNNTPMTDKSKDSMCSSSMVEEQ--KLPSLAVGSCSTGQ 507
Query: 385 TKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE 444
+G TD T FLSN++ AT + L R F+ G V I+ D G+ G AY++F+ E
Sbjct: 508 PEGGTDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTD-IAGQPTGSAYIEFLHKE 566
Query: 445 HLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
A+ + F+ + L + R N + SG
Sbjct: 567 SAEQALTLDNTSFMSRMLKVVRKNSLEVSQQSG 599
>gi|296803623|ref|XP_002842664.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
gi|238846014|gb|EEQ35676.1| RNP domain-containing protein [Arthroderma otae CBS 113480]
Length = 186
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ L + R+N
Sbjct: 125 LVLNESLFRGRNLKVVPKRTN 145
>gi|125590709|gb|EAZ31059.1| hypothetical protein OsJ_15147 [Oryza sativa Japonica Group]
Length = 494
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 338 PQKPKKV-HDKEKRQVQNLAEENEGRETKQT---------VEEQPKKQP---IKDAVPGR 384
PQ P ++ H ++ LA N T ++ VEEQ K P + G+
Sbjct: 254 PQVPTEMKHTDSRKSTATLAHVNNTPMTDKSKDSMCSSSMVEEQ--KLPSLAVGSCSTGQ 311
Query: 385 TKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE 444
+G TD T FLSN++ AT + L R F+ G V I+ D G+ G AY++F+ E
Sbjct: 312 PEGGTDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTD-IAGQPTGSAYIEFLHKE 370
Query: 445 HLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
A+ + F+ + L + R N + SG
Sbjct: 371 SAEQALTLDNTSFMSRMLKVVRKNSLEVSQQSG 403
>gi|300120868|emb|CBK21110.2| unnamed protein product [Blastocystis hominis]
Length = 674
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 37/274 (13%)
Query: 5 RAHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYT 64
R H EE I Q + Y+ Y K+E+ + R + +YERA+ P + +W+ Y
Sbjct: 57 RRHFEEGIKNQ----RQHMGNYIKYAKWEEKQDEIERARNIYERALDVDPTAYSVWIKYA 112
Query: 65 QYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAF 124
++ + + N R+VY RA P V +LW + L+ S TVFE+ + +F
Sbjct: 113 EFEVRNRNI-NHARNVYDRAVTILPRVDQLWYK-FAYLQESIGDIISTRTVFER-WMQSF 169
Query: 125 STFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRL 184
+ + LT I +R G+++ V R+ ++R D L EQ
Sbjct: 170 PNEQAW----LTYIKFEQR----CGKLDNV------RKLYERMIDQLPEQSS-------- 207
Query: 185 YAYWAHLEQSMGKDMVSARGVWERL---LKISGAMLEAWQSYISMEIELDHINEARSIYK 241
Y +A E+ G + R V+ER L + + + EI I+ AR+I K
Sbjct: 208 YIKFAKWEERNGNKQ-ACRAVFERATTELHQENVDEDLYLEFAKFEIRCKEIDRARAILK 266
Query: 242 RCYSKRFTGTGSEDICHA-WLRFEREYGTLEDFD 274
G +D A + FE++YGT+++ +
Sbjct: 267 WALE---NLQGPKDTLTAEYTLFEKQYGTMDNIE 297
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 23 FQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSD---------LWLDYTQYLDKTLKV 73
+ + YLK + P V YERA+++ P S + LW+ Y Y++ L+
Sbjct: 319 YDAWFDYLKMLEQQNRPSEVVEAYERAVSNVPPSKEKRFWRRYIYLWIYYALYVELELED 378
Query: 74 GNVVRDVYSRATKNCPW----VGELWV 96
+ R+VY + + P G++W+
Sbjct: 379 ADRAREVYKKCIQTIPHKSFTFGKIWI 405
>gi|367030447|ref|XP_003664507.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
gi|347011777|gb|AEO59262.1| hypothetical protein MYCTH_2307416 [Myceliophthora thermophila ATCC
42464]
Length = 186
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 337 APQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT------D 390
+P+ K HD+ + N+ ENE + + E K + ++ ++ + T D
Sbjct: 3 SPKDEGKPHDETR---DNVDGENEEKRVAEMEAEAAKLREMQASLDQARQDLTEDKEDVD 59
Query: 391 ECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV 450
+ F+ N++ + E+L+ F G ++ + IL DKFTG+ +G AYV+F + + +A A+
Sbjct: 60 NRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPQLVAQAL 119
Query: 451 AKNKQMFLGKKLSI 464
N +F G+ + +
Sbjct: 120 VLNDSVFKGRNIKV 133
>gi|351698678|gb|EHB01597.1| Polyadenylate-binding protein 2 [Heterocephalus glaber]
Length = 118
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TD + ++ N++ AT E+L F G V+ + IL DKF+G +G AY+ F D E +
Sbjct: 40 TDARSIYVGNVDYGATAEELEAHFHGCGSVNYVTILCDKFSGHPKGFAYMKFSDKESVRT 99
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 100 SLALDESLFRGRQIKV 115
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N++ K+T++ + +F G V+ I IL DK TG +G YV+F++ E + A+A
Sbjct: 102 SVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMAL 161
Query: 453 NKQMFLGKKLSIA 465
N F ++L I
Sbjct: 162 NDSFFNERQLKIT 174
>gi|384494630|gb|EIE85121.1| hypothetical protein RO3G_09831 [Rhizopus delemar RA 99-880]
Length = 203
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
P K D + ++ N++ A+ E+L+ F G ++ + IL DKFTG +G AYV+F
Sbjct: 69 PEEDKEAVDSRSVYVGNVDYGASPEELQAHFQSCGTINRVTILCDKFTGHPKGYAYVEFA 128
Query: 442 DDEHLAAAVAKNKQMFLGK--KLSIARSN 468
+ + AAV+ + +F + K+S R+N
Sbjct: 129 EPSFVNAAVSLDNSLFRARLLKVSPKRTN 157
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA-VAKN 453
FL NI AT ED ++ FS G + + + D TG+S+G AYV F D EH A A + +
Sbjct: 304 FLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELD 363
Query: 454 KQMFLGKKLSIARSNPKQ 471
KQ+F G+ L I ++ K+
Sbjct: 364 KQIFQGRLLHILPADAKK 381
>gi|326469996|gb|EGD94005.1| hypothetical protein TESG_01534 [Trichophyton tonsurans CBS 112818]
Length = 186
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ + + R+N
Sbjct: 125 LVLNESLFRGRNIKVVPKRTN 145
>gi|354465338|ref|XP_003495137.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 2
[Cricetulus griseus]
Length = 281
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG--RTKGFTDECTAFLSNINLKATY 405
E+ VQ A E +G E Q + + + PG + K D + ++ N++ +
Sbjct: 108 EQPYVQRKATEEKGAEVGQLL----SPEIMGCFFPGTPKEKVEADHRSVYVGNVDYGGSA 163
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
+LR +FS G + + IL DKF+G +G AY++F + AAV ++ F G+ + +
Sbjct: 164 AELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQAAVELDESTFRGRVIKVL 223
Query: 466 RSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRG 514
SS +R + +S + QSRGRG
Sbjct: 224 PKRTNFPGISSTDRGGLRTHLGSRAQPFLHSSLHRRPRFRPHGQSRGRG 272
>gi|328860711|gb|EGG09816.1| hypothetical protein MELLADRAFT_29239 [Melampsora larici-populina
98AG31]
Length = 150
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ +T E+++ FS G ++ I IL DKFTG+ +G AY++F D +
Sbjct: 50 VDSRSVYVGNVDYGSTAEEIQAHFSSCGTINRITILCDKFTGQPKGYAYIEFSDPMLVHQ 109
Query: 449 AVAKNKQMFLGKKLSIA 465
A N +F G+++ +
Sbjct: 110 ACQLNDSLFRGRQIKVT 126
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 37 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 96
Query: 450 VAKNKQMFLGKKLSI----ARSNPKQRKDSSG 477
+A + Q+ LG+ + + A N Q SSG
Sbjct: 97 IALSGQLLLGQPVMVKPSEAEKNLVQSNASSG 128
>gi|125548679|gb|EAY94501.1| hypothetical protein OsI_16274 [Oryza sativa Indica Group]
Length = 429
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 16/153 (10%)
Query: 338 PQKPKKV-HDKEKRQVQNLAEENEGRETKQT---------VEEQPKKQP---IKDAVPGR 384
PQ P ++ H ++ LA N T ++ VEEQ K P + G+
Sbjct: 189 PQVPTEMKHTDSRKSTATLAHVNNTPMTDKSKDSMCSSSMVEEQ--KLPSLAVGSCSTGQ 246
Query: 385 TKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE 444
+G TD T FLSN++ AT + L R F+ G V I+ D G+ G AY++F+ E
Sbjct: 247 PEGGTDSRTVFLSNVHFAATKDALSRHFNKFGAVLKTLIVTD-IAGQPTGSAYIEFLHKE 305
Query: 445 HLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
A+ + F+ + L + R N + SG
Sbjct: 306 SAEQALTLDNTSFMSRMLKVVRKNSLEVSQQSG 338
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 200 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 259
Query: 450 VAKNKQMFLGKKLSI----ARSNPKQRKDSSG 477
+A + Q+ LG+ + + A N Q SSG
Sbjct: 260 IALSGQLLLGQPVMVKPSEAEKNLVQSNASSG 291
>gi|340054247|emb|CCC48543.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 213
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T DLR FFS G + + +L DKFTG+ +G +Y++F E A+ KN
Sbjct: 67 FVGGLDPRTTESDLRVFFSGCGAIKRLTMLRDKFTGQLKGTSYIEFETVEQANIALVKNG 126
Query: 455 QMFLGKKLSIA 465
Q G+ L +A
Sbjct: 127 QSLHGRPLVVA 137
>gi|440908773|gb|ELR58758.1| Embryonic polyadenylate-binding protein 2, partial [Bos grunniens
mutus]
Length = 272
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 342 KKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINL 401
++ E +VQNL +EG E + + P D+ K D + ++ N++
Sbjct: 96 EQAQGPEPPRVQNL---DEGEEAAGALLARQLLSPETDSP--LEKAEADHRSIYVGNVDY 150
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
T ++L +F+ G + + IL DKF+G +G AY++F + AAV +K +F G+
Sbjct: 151 GGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRV 210
Query: 462 LSI 464
+ +
Sbjct: 211 IKV 213
>gi|112983360|ref|NP_001037644.1| polyadenylate binding protein 2 [Bombyx mori]
gi|109706831|gb|ABG43002.1| polyadenylate binding protein 2 [Bombyx mori]
Length = 218
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 349 KRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFT---------DECTAFLSNI 399
K +V+ + EE E + QT + KQ + PG T D + ++ N+
Sbjct: 48 KARVREMEEEAEKLKQMQT---EVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNV 104
Query: 400 NLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
+ AT E+L + F G ++ + IL +K+ G +G AY++F D + + A+A ++ +F G
Sbjct: 105 DYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRG 164
Query: 460 KKLSIARSNPKQRKDSSGERAP 481
+++ + + SS R P
Sbjct: 165 RQIKVMPKRTNKPGLSSTNRPP 186
>gi|315039445|ref|XP_003169098.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
gi|311337519|gb|EFQ96721.1| polyadenylate-binding protein 2 [Arthroderma gypseum CBS 118893]
Length = 186
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ + + R+N
Sbjct: 125 LVLNESLFRGRNIKVVPKRTN 145
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ KAT E L FF VG + + IL DK++G +G AYV+F + E + A
Sbjct: 33 DSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVEFENIESVNKA 92
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
V + + F G+++ ++ R+N
Sbjct: 93 VDLHGKEFRGREIRVSPKRTN 113
>gi|296478138|tpg|DAA20253.1| TPA: ePABP2-like [Bos taurus]
Length = 272
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 342 KKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINL 401
++ E +VQNL +EG E + + P D+ K D + ++ N++
Sbjct: 96 EQAQGPEPPRVQNL---DEGEEAAGALLARQLLSPETDSP--LEKAEADHRSIYVGNVDY 150
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
T ++L +F+ G + + IL DKF+G +G AY++F + AAV +K +F G+
Sbjct: 151 GGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRV 210
Query: 462 LSI 464
+ +
Sbjct: 211 IKV 213
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + L+ +FS G V ++I+ D TG+SRG ++ F ++
Sbjct: 194 DNCKMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTF-ENPSSVDE 252
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + RS P++ +D +G+
Sbjct: 253 VVKTQHILDGKVIDPKRSIPREEQDKTGK 281
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG +V + D V +NK
Sbjct: 283 FVGGIGTDVRPKEFEDFFAQYGTIIDAQLMLDKDTGRSRGFGFVTY-DSGDAVDRVCQNK 341
Query: 455 QM-FLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQT 491
+ F GK++ I R+ P+ +RA Q + QT
Sbjct: 342 YIEFKGKQIEIKRAEPRHN-----QRAAASQPMNTNQT 374
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ KR+++ + EE RE + VE++ + P A K D + F+ N++
Sbjct: 44 DEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYA 103
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 104 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQEALLLNESELHGRQL 162
Query: 463 SI 464
+
Sbjct: 163 KV 164
>gi|862465|dbj|BAA04177.1| ss-DNA binding protein 12RNP2 precursor [Synechococcus elongatus
PCC 6301]
Length = 100
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT ED+R F++ G VS + + D+ TG+ RG A+++ +D H AA++
Sbjct: 1 MTIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEMEEDAHEDAAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPK 470
+ + + G++L ++++ PK
Sbjct: 61 ELDGAEWFGRQLRVSKARPK 80
>gi|296474988|tpg|DAA17103.1| TPA: ePABP2-like [Bos taurus]
Length = 271
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 347 KEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYE 406
E +VQNL +EG E + + P D+ K D + ++ N++ T +
Sbjct: 100 PEPPRVQNL---DEGEEATGALLARQLLSPETDSP--LEKAEADHRSIYVGNVDYGGTAQ 154
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
+L +F+ G + + IL DKF+G +G AY++F + AAV +K +F G+ + +
Sbjct: 155 ELEAYFNHCGEIHQVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRVIKV 212
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G V+ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ MF G+++ +
Sbjct: 157 AMAMDESMFRGRQIKV 172
>gi|238006378|gb|ACR34224.1| unknown [Zea mays]
gi|413952637|gb|AFW85286.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
D+ KR+++ + EE Q + + P +A K D + F+ N++ T
Sbjct: 35 DEMKRRLKEMEEEAAALREMQAKVAKDMQDP--NATTSENKEEMDSRSVFVGNVDYACTP 92
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L +A
Sbjct: 93 EEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVA 151
Query: 466 RSNPKQRKDSSGERAP 481
PK R + G + P
Sbjct: 152 ---PK-RTNVPGMKQP 163
>gi|411119813|ref|ZP_11392189.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410709969|gb|EKQ67480.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 90
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +A ED+R FS+ G VS + + D+ TG+ RG A+VD D AA+A
Sbjct: 1 MTIYVGNLSFQAEEEDIREVFSEYGKVSRVSLPTDRETGRKRGFAFVDMESDAEEDAAIA 60
Query: 452 K-NKQMFLGKKLSIARSNPKQRKDSSG 477
+ + +LG++L + ++ P++ + G
Sbjct: 61 ELDGAEWLGRELKVNKAKPRESGGNRG 87
>gi|258568696|ref|XP_002585092.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
gi|237906538|gb|EEP80939.1| polyadenylate-binding protein 2 [Uncinocarpus reesii 1704]
Length = 194
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 123
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ L +
Sbjct: 124 LVLNESVFRGRNLKVV 139
>gi|327302280|ref|XP_003235832.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
gi|326461174|gb|EGD86627.1| hypothetical protein TERG_02884 [Trichophyton rubrum CBS 118892]
Length = 186
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 65 DARSIFVGNVDYAASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPSLVAQA 124
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+ N+ +F G+ + + R+N
Sbjct: 125 LVLNESLFRGRNIKVVPKRTN 145
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G V+ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ MF G+++ +
Sbjct: 157 AMAMDESMFRGRQIKV 172
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ KR+++ + EE RE + VE++ + P A K D + F+ N++
Sbjct: 44 DEMKRRLKEMEEEAAALREMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYA 103
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 104 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQEALLLNESELHGRQL 162
Query: 463 SI 464
+
Sbjct: 163 KV 164
>gi|326531612|dbj|BAJ97810.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 740
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N+ T +DLR+FFSD +SSIR DK TG+ +G A+VDF D LA A+ ++
Sbjct: 377 YVGNLAWDVTEDDLRKFFSDCK-ISSIRFGKDKETGEFKGFAHVDFSDSTSLAIALKLDQ 435
Query: 455 QMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQT 491
+ G+ I + PK+ + A ++ +++ +T
Sbjct: 436 NVIKGRPARIRCAVPKKENQKPDDNATSDSSKNSIRT 472
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 189 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 248
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSA 498
+A + Q+ LG+ + + K S E+ QS+ G AG +
Sbjct: 249 IALSGQLLLGQPVMV--------KPSEAEK---NLVQSNASGGAAGVTG 286
>gi|354465336|ref|XP_003495136.1| PREDICTED: embryonic polyadenylate-binding protein 2-like isoform 1
[Cricetulus griseus]
Length = 275
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG--RTKGFTDECTAFLSNINLKATY 405
E+ VQ A E +G E Q + + + PG + K D + ++ N++ +
Sbjct: 102 EQPYVQRKATEEKGAEVGQLL----SPEIMGCFFPGTPKEKVEADHRSVYVGNVDYGGSA 157
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
+LR +FS G + + IL DKF+G +G AY++F + AAV ++ F G+ + +
Sbjct: 158 AELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQAAVELDESTFRGRVIKVL 217
Query: 466 RSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGRG 514
SS +R + +S + QSRGRG
Sbjct: 218 PKRTNFPGISSTDRGGLRTHLGSRAQPFLHSSLHRRPRFRPHGQSRGRG 266
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
++E + ++NL E E ++ + E P+ K D + F+ N++ AT
Sbjct: 46 EREAQLIRNLHSEVE-KQMTTVLNESSSTIPLTT----EEKIEVDSRSVFVGNVDYGATA 100
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI- 464
E L F G ++ + IL D+++G+ +G AYV+F D E A++A +F G+++ +
Sbjct: 101 EQLEAHFHGCGAINRVTILCDRYSGRPKGFAYVEFADKESAQASLAMTDTLFRGRQIKVL 160
Query: 465 -------ARSNPKQRKDSSGERAPTEQAQSHQQTG 492
N + R+ R ++Q G
Sbjct: 161 EKRTNRPGMGNTRARRPYGRARVVYRYVYPNRQIG 195
>gi|432952652|ref|XP_004085179.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 240
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 377 IKDAVPGRTKGFTDECTA-------FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFT 429
+K AVP + TDE A F+ + +DL +FS G V + I+ +K T
Sbjct: 78 VKRAVPKKQ---TDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTT 134
Query: 430 GKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQ 489
GK RG +V F DD AVA G ++ + ++ PKQ + G S Q
Sbjct: 135 GKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKAVPKQEMQAGG--------CSDQ 186
Query: 490 QTGNAGTSASKESSIETSKQSRGRGDSVQLKG----KNTFAVPRNVRP 533
Q G G ++ +++ +GRG Q G K +F R+ P
Sbjct: 187 QNGYGGGNSYQQNGYRGRTGYKGRGHGQQSSGSGPMKKSFGGQRSSAP 234
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
F C F+ + + + LR+ F G + ++ K +SR +V ++ E
Sbjct: 2 FNQACKLFVGGLKVDTNDDGLRKHFEQFGTLIDFAVVPHKTAQRSRCFGFVTYLTPEEAN 61
Query: 448 AAVAKNKQMFLGKKLSIARSNPKQRKDSSGER 479
AA+A + G + + R+ PK++ D S R
Sbjct: 62 AAMAASPHTVEGNWVEVKRAVPKKQTDESEAR 93
>gi|116201543|ref|XP_001226583.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
gi|88177174|gb|EAQ84642.1| hypothetical protein CHGG_08656 [Chaetomium globosum CBS 148.51]
Length = 250
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ + E+L+ F G ++ + IL DKFTG+ +G AYV+F + +A A
Sbjct: 125 DNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSEPNLVAQA 184
Query: 450 VAKNKQMFLGKKLSI 464
+ N +F G+ + +
Sbjct: 185 LVLNDSVFKGRNIKV 199
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G V+ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ MF G+++ +
Sbjct: 157 AMAMDESMFRGRQIKV 172
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G V+ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ MF G+++ +
Sbjct: 157 AMAMDESMFRGRQIKV 172
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E + +
Sbjct: 28 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 87
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQ 509
+A ++ +F G+++ + + S+ +R +A+ +T N +S S+ S S+
Sbjct: 88 LALDESLFRGRQIKVIPKRTNRPGISTTDRG-FPRARYRARTTNYNSSRSRFYSGFNSR- 145
Query: 510 SRGR 513
RGR
Sbjct: 146 PRGR 149
>gi|340384626|ref|XP_003390812.1| PREDICTED: nucleolar protein 12-like, partial [Amphimedon
queenslandica]
Length = 224
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C+ F+ N+ A E LR+ F G + IRI+ D TG ++G AYV F D + A
Sbjct: 86 CSVFVGNVPFGADEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACK 145
Query: 452 KNKQMFL-GKKLSIARS 467
KN+++ + G+KL + R
Sbjct: 146 KNERIEVEGRKLRVFRC 162
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 366 QTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILH 425
Q + P+ P + P + D + ++ N++ AT ++L F+ G V+ + IL
Sbjct: 57 QLMTCSPRPGPFYNMTP-EERIDADNRSVYVGNVDYGATADELEIHFNGCGPVNRVTILC 115
Query: 426 DKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
D+F+G +G AY++F D + + +A+ ++ +F G+ L +
Sbjct: 116 DRFSGHPKGFAYIEFSDRDSVNSAIGLHETLFRGRVLKV 154
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F ++ + DL FFS VG V +R++ D T +S+G+AYV+F+D E + A
Sbjct: 195 DMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFLDVESVPLA 254
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAG 495
+ N Q G + + + +R ++ + A T + S Q GN G
Sbjct: 255 MGLNGQKLFGIPI-VVQPTQAERNRAAAQNAST--SSSTLQRGNVG 297
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G V+ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ MF G+++ +
Sbjct: 157 AMAMDESMFRGRQIKV 172
>gi|242092470|ref|XP_002436725.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
gi|241914948|gb|EER88092.1| hypothetical protein SORBIDRAFT_10g007620 [Sorghum bicolor]
Length = 203
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ T E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + A
Sbjct: 79 DSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEA 137
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
V N+ G++L +A PK R + G + P
Sbjct: 138 VKLNESELHGRQLKVA---PK-RTNVPGMKQP 165
>gi|255085494|ref|XP_002505178.1| predicted protein [Micromonas sp. RCC299]
gi|226520447|gb|ACO66436.1| predicted protein [Micromonas sp. RCC299]
Length = 70
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
TAF+ N+ K + ++L +F GG + RI+ DK TG+SRG AYV+F ++ + AA+ +
Sbjct: 1 TAFVKNLPFKCSEDELAAWFDARGGTVTARIVRDKATGRSRGFAYVEFTEEGAVQAAIMR 60
Query: 453 NKQMFLGKKL 462
+ + F G+ L
Sbjct: 61 DGEEFQGRAL 70
>gi|349803921|gb|AEQ17433.1| putative poly binding nuclear 1 [Hymenochirus curtipes]
Length = 255
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DK+TG +G AY++F + E + +
Sbjct: 132 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSEKESVRTS 191
Query: 450 VAKNKQMFLGKKLSIA 465
+A ++ +F G+++ +
Sbjct: 192 MALDESLFRGRQIKVG 207
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ K++++ + EE RE + VE++ P A K D + F+ N++
Sbjct: 41 DEMKKRLKEMEEEAAALREMQAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYA 100
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+A N+ G++L
Sbjct: 101 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEALALNESELHGRQL 159
Query: 463 SIA--RSN 468
++ R+N
Sbjct: 160 KVSPKRTN 167
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ +N + T ++LR +FS G V+ ++I+ D TG+SRG ++ F D + V K +
Sbjct: 166 FIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSV-DEVVKTQ 224
Query: 455 QMFLGKKLSIARSNPKQRKDSSG 477
+ GK + R+ P++ +D +G
Sbjct: 225 HILDGKVIDPKRAIPREEQDKTG 247
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG ++ + D V +NK
Sbjct: 250 FVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITY-DSPDAVDRVCQNK 308
Query: 455 QM-FLGKKLSIARSNPKQ-RKDSSGERAPTEQ 484
+ F GK++ I R+ P+Q +K + +PT Q
Sbjct: 309 FIEFKGKRIEIKRAEPRQVQKQRTTNASPTGQ 340
>gi|378732360|gb|EHY58819.1| nucleolin, variant [Exophiala dermatitidis NIH/UT8656]
gi|378732361|gb|EHY58820.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 1283
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 24/145 (16%)
Query: 22 KFQQYMIYLKYEQSSGDPGR-------------------VQLLYERAITDFPVSSDLWLD 62
+FQ + Y+++E+S G+ R V+ LY+RA FP W +
Sbjct: 454 EFQAFSKYIEWERSEGEKSRSKKQKGKRGPQTTPPPFDMVEALYQRAELRFPSVLAAWEE 513
Query: 63 YTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK---S 119
+ YL K N+V +V SRATK+CPW G LW + LL+ E + +E + K S
Sbjct: 514 HIDYLLDQSK-PNIV-EVLSRATKHCPWSGSLWKQYLLASEVAEEPFDETEKIKHKATSS 571
Query: 120 LLCAFSTFEEYLDLFLTRIDGLRRR 144
L + EE L ++ L RR
Sbjct: 572 GLLEAAGIEEALTVYDAWCGYLLRR 596
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHD-KFTGKSRGLAYVDFIDDEHLAA 448
D T F+ + KAT ED+ + FS G + IR+ HD K ++RG+A++ F E A
Sbjct: 1003 DGRTVFVGQLPFKATTEDIEKSFSRYGKLDHIRLPHDPKNKSRNRGIAFITFARQEEAEA 1062
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASK 500
A+A + Q F+ +K+++ + +D+ R ++ S Q +G++ ++
Sbjct: 1063 ALAMDGQEFMQRKITVHIDSEGNHRDNKSNRG-RSKSPSAQPSGSSTVQPTR 1113
>gi|423076693|ref|ZP_17065401.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
gi|361852256|gb|EHL04522.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
Length = 112
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N+ T EDL FF G V S RI+ D+ TG+SRG +V+ D++ A
Sbjct: 31 ATLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDEDAARMAED 90
Query: 452 KNKQMFLGKKLSIARSNPKQR 472
N + F G+ L++ + PKQ+
Sbjct: 91 LNGKDFGGRPLTVNEARPKQQ 111
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 366 QTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILH 425
Q + P+ P + P + D + ++ N++ AT ++L F+ G V+ + IL
Sbjct: 35 QLLTSSPQSGPFYNMTP-EERIDADNRSIYVGNVDYGATADELEIHFNGCGPVNRVTILC 93
Query: 426 DKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
D+F+G +G AY++F D + + +A+ ++ +F G+ L +
Sbjct: 94 DRFSGHPKGFAYIEFSDRDSVQSAIGLHETLFRGRVLKV 132
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQR 472
G+AYV+F+D + A+ Q LG + + S ++R
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKR 233
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 193 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 252
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+ LG+ + + S
Sbjct: 253 IALSGQLLLGQPVMVKPS 270
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ T + N++LKA D+ FFS+V G V I+ + D+ +GKS+G+AYV+F E +
Sbjct: 145 DDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIK 204
Query: 449 AVAKNKQMFLGKKLSIARSNP-KQRKDSSGERAPTE 483
A+A N M + + + S K R + + P +
Sbjct: 205 ALAANGYMLKNRPIKVQSSQAEKNRAAKASKHHPID 240
>gi|302817851|ref|XP_002990600.1| hypothetical protein SELMODRAFT_27868 [Selaginella moellendorffii]
gi|300141522|gb|EFJ08232.1| hypothetical protein SELMODRAFT_27868 [Selaginella moellendorffii]
Length = 157
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 380 AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVD 439
A P +T+G T + ++ N++ AT +DLR+FF ++S+R+ DK T + +G +VD
Sbjct: 72 APPPKTEGCT---SVYVGNLSWDATEKDLRQFFKRCK-ITSVRLALDKETREFKGFGHVD 127
Query: 440 FIDDEHLAAAVAKNKQMFLGKKLSIARSNP 469
F DDE + A+ ++++FL + + IA + P
Sbjct: 128 FEDDESVERAIKLDQKLFLNRPIKIAYAVP 157
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
+ P +QPI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 130 DRSPVRQPIDNLTPEER----DARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRIISDRN 185
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
+ +S+G+AY++F+D + A+ + Q LG + + S ++ + ++
Sbjct: 186 SRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAA 233
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F I+LKAT D+ FFS G V +R++ D+ + +S+G+ YV+F+D + A
Sbjct: 176 DQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMA 235
Query: 450 VAKNKQMFLGKKLSI 464
+A + Q+ L + + +
Sbjct: 236 IALSGQLLLSQPVMV 250
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKAT D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 200 DQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 259
Query: 450 VAKNKQMFLGK----KLSIARSNPKQRKDSSG 477
+A + Q+ LG+ K S A N Q SSG
Sbjct: 260 IALSGQLLLGQPVMVKPSEAEKNLVQSNASSG 291
>gi|56752106|ref|YP_172807.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81300808|ref|YP_401016.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
gi|56687065|dbj|BAD80287.1| RRM type RNA-binding protein [Synechococcus elongatus PCC 6301]
gi|81169689|gb|ABB58029.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
Length = 95
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT ED+R F++ G VS + + D+ TG+ RG A+++ +D H AA++
Sbjct: 1 MTIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRGFAFIEMEEDAHEDAAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPK 470
+ + + G++L ++++ PK
Sbjct: 61 ELDGAEWFGRQLRVSKARPK 80
>gi|256839767|ref|ZP_05545276.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738697|gb|EEU52022.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 123
Score = 56.2 bits (134), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++SN++ + DLR+ F+D G ++S +++ D+ TG+SRG +V+ DDE A+ + N
Sbjct: 4 YISNLSYNISDADLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEELN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGER 479
+ + GK ++I + P++ + G R
Sbjct: 64 QASYDGKVINITEARPREDRGDRGGR 89
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E P +QPI + P T C + I + DL FFS VG V +RI+ D+
Sbjct: 130 ERSPVRQPIDNLTPEERDARTVFCMQLAARIRAR----DLEDFFSAVGKVRDVRIISDRN 185
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AY++F++ + A+ Q LG + + S
Sbjct: 186 SRRSKGIAYIEFVETSSVPLAIGLTGQRLLGVPIIVQAS 224
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
KG ++ +++ T E LR F G + I+++ D TG+S+G ++ F D E
Sbjct: 240 KGSAGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAEC 299
Query: 446 LAAAVAK-NKQMFLGKKLSIARSNPKQRKDSS 476
A+ + N G+ + + +R DSS
Sbjct: 300 AKKALEQLNGFELAGRPMKVGHVT--ERSDSS 329
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G V+ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
A+A ++ MF G+++ + + S R P
Sbjct: 157 AMAMDESMFRGRQIKVMPKRTNKPGFSMTNRGP 189
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ +N + T ++LR +FS G V+ ++I+ D TG+SRG ++ F D + V K +
Sbjct: 174 FIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSV-DEVVKTQ 232
Query: 455 QMFLGKKLSIARSNPKQRKDSSG 477
+ GK + R+ P++ +D +G
Sbjct: 233 HILDGKVIDPKRAIPREEQDKTG 255
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS+ G + +++ DK TG+SRG ++ + D V +NK
Sbjct: 258 FVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITY-DSPDAVDRVCQNK 316
Query: 455 QM-FLGKKLSIARSNPKQ-RKDSSGERAPTEQAQSHQQTG 492
+ F GK++ I R+ P+Q +K + +PT Q+ + G
Sbjct: 317 FIEFKGKRIEIKRAEPRQVQKQRTTNPSPTTQSGTFSNNG 356
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E P +QPI + P T C + I + DL FFS VG V +RI+ D+
Sbjct: 113 ERSPIRQPIDNLTPEERDARTVFCMQLAARIRAR----DLEDFFSAVGKVRDVRIISDRN 168
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AY++F++ + A+ Q LG + + S
Sbjct: 169 SRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQAS 207
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
KG + ++ +++ T E LR F G + I+++ D TG+S+G ++ F D E
Sbjct: 223 KGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAEC 282
Query: 446 LAAAVAK-NKQMFLGKKLSIARSNPKQRKDSS 476
A+ + N G+ + + +R DSS
Sbjct: 283 AKKALEQLNGFELAGRPMKVGHVT--ERSDSS 312
>gi|409243|gb|AAA27362.1| RNA-binding protein [Synechococcus sp.]
Length = 100
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT ED+R F++ G VS + + D+ TG+ R A+++ +D H AA++
Sbjct: 1 MTIYVGNLSFRATEEDVREVFAEYGPVSRVSLPVDRETGRLRAFAFIEMEEDAHEDAAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPK--QRKDSSGERAPT 482
+ + + G++L ++++ PK +R + R PT
Sbjct: 61 ELDGAEWFGRQLRVSKARPKDDRRPAARSGRTPT 94
>gi|392395169|ref|YP_006431771.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390526247|gb|AFM01978.1| RRM domain-containing RNA-binding protein [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 116
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N+ T EDL FF G V S RI+ D+ TG+SRG +V+ D++ A
Sbjct: 35 ATLYVGNLPWNTTSEDLSSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDEDATRMAED 94
Query: 452 KNKQMFLGKKLSIARSNPKQR 472
N + F G+ L++ + PKQ+
Sbjct: 95 LNGKDFGGRPLTVNEARPKQQ 115
>gi|413918637|gb|AFW58569.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 588
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G+ +G D T F+SN++ ++ + L R F+ G V I+ D TG+S G AY++F+
Sbjct: 406 GQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLH 465
Query: 443 DEHLAAAVAKNKQMFLGKKLSIAR 466
E A+ N F+ + L + R
Sbjct: 466 KESAEQALTLNGTSFMSRILKVVR 489
>gi|401884639|gb|EJT48792.1| hypothetical protein A1Q1_02212 [Trichosporon asahii var. asahii
CBS 2479]
Length = 333
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 395 FLSNINLKATYEDLRRFFSD-VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
FL NI K T +++ F + VG + ++R+L DK TGKSRG+A+++ + L +A+ ++
Sbjct: 134 FLGNIGFKTTKDEVAAHFKESVGRIPAVRLLTDKATGKSRGIAFLELANGNELQSALKQH 193
Query: 454 KQMFLGKKLSI 464
+ GK++++
Sbjct: 194 HSILNGKRINV 204
>gi|225558865|gb|EEH07148.1| RNP domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 150
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + +A A
Sbjct: 64 DARSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFTEPSLVAQA 123
Query: 450 VAKNKQMFLGKKL 462
+ N+ +F G+ L
Sbjct: 124 LVLNESVFRGRNL 136
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
+D + ++ N++ AT ++L +F+ G V+ + I +++FTG +G AY++F D E +
Sbjct: 63 SDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRESVRT 122
Query: 449 AVAKNKQMFLGK--KLSIARSN 468
A+A ++ +F G+ K+S R+N
Sbjct: 123 AMALDETLFRGRVIKVSPKRTN 144
>gi|194706900|gb|ACF87534.1| unknown [Zea mays]
gi|195622774|gb|ACG33217.1| polyadenylate-binding protein 2 [Zea mays]
Length = 203
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ T E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + A
Sbjct: 79 DSRSVFIGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEA 137
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ N+ G++L +A PK R + G + P
Sbjct: 138 IKLNESELHGRQLKVA---PK-RTNVPGMKQP 165
>gi|159794905|pdb|2JWN|A Chain A, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
gi|159794906|pdb|2JWN|B Chain B, Solution Nmr Structure Of The Protease-Resistent Domain Of
Xenopus Laevis Epabp2
Length = 124
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + ++ N++ +T +DL FS G ++ I IL DKF+G +G AY++F + + AA
Sbjct: 35 DKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAA 94
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGER 479
VA ++ +F G+ + + SS +R
Sbjct: 95 VAMDETVFRGRTIKVLPKRTNMPGISSTDR 124
>gi|302770591|ref|XP_002968714.1| hypothetical protein SELMODRAFT_27867 [Selaginella moellendorffii]
gi|300163219|gb|EFJ29830.1| hypothetical protein SELMODRAFT_27867 [Selaginella moellendorffii]
Length = 157
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 380 AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVD 439
A P +T+G T + ++ N++ AT +DLR+FF ++S+R+ DK T + +G +VD
Sbjct: 72 APPPKTEGCT---SVYVGNLSWDATEKDLRQFFKRCK-ITSVRLALDKETREFKGFGHVD 127
Query: 440 FIDDEHLAAAVAKNKQMFLGKKLSIARSNP 469
F DDE + A+ ++++FL + + IA + P
Sbjct: 128 FEDDESVERAIKLDQKLFLNRPIKIAYAVP 157
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ T + N++LKA D+ FFS+V G V I+ + D+ +GKS+G+AYV+F E +
Sbjct: 591 DDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVVK 650
Query: 449 AVAKNKQMFLGKKLSIARS 467
A++ N M + + I S
Sbjct: 651 ALSANGYMLKNRPIKIQSS 669
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV- 450
+ ++ N++ T EDL+ FS G VS +++ DK TG+ RG +VD + AA+
Sbjct: 1 MSIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAID 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSG 477
A N ++G++L + ++ P++ + S G
Sbjct: 61 ALNGAEWMGRQLKVNKARPREERSSQG 87
>gi|406603845|emb|CCH44661.1| hypothetical protein BN7_4230 [Wickerhamomyces ciferrii]
Length = 180
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ ++ E+L++ F VG ++ + IL +KFTG+ +G AY++F + + +
Sbjct: 68 DARSIYVGNVDYDSSPEELQKHFQSVGVINRVTILLNKFTGQPKGFAYIEFAEPSSVVNS 127
Query: 450 VAKNKQMFLGKKLSIARSNPKQ 471
+ N +F G+ L + NPK+
Sbjct: 128 LVLNDSVFRGRNLKV---NPKR 146
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N++ T DLR F + G VSS +++DKFTG+S+G +V+ +D A+A+A N
Sbjct: 4 YIGNLDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIADLN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGER 479
G+ + + + P++ + +S R
Sbjct: 64 DSDLNGRTIKVNEAKPREERPASRSR 89
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 379 DAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYV 438
DA PG F+ ++ N++ + + LR FS+ G V+S +I+ D+ TG S+G +V
Sbjct: 12 DAFPGEGI-FSMAKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFV 70
Query: 439 DFIDDEHLAAAVA-KNKQMFLGKKLSI--ARSNPKQRKDSSG 477
+ DE +AA+A N + F G++L + A P++ +D+ G
Sbjct: 71 EMSTDEEASAAIAGTNGREFEGRQLRVNEAMDKPRRERDNGG 112
>gi|406694189|gb|EKC97522.1| hypothetical protein A1Q2_08186 [Trichosporon asahii var. asahii
CBS 8904]
Length = 333
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 395 FLSNINLKATYEDLRRFFSD-VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
FL NI K T +++ F + VG + ++R+L DK TGKSRG+A+++ + L +A+ ++
Sbjct: 134 FLGNIGFKTTKDEVAAHFKESVGRIPAVRLLTDKATGKSRGIAFLELANGNELQSALKQH 193
Query: 454 KQMFLGKKLSI 464
+ GK++++
Sbjct: 194 HSILNGKRINV 204
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 368 VEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDK 427
V P P + P + D + ++ N++ AT ++L F+ G V+ + IL D+
Sbjct: 57 VTSSPHPAPFYNMTP-EERIDADNRSIYVGNVDYGATADELEIHFNACGPVNRVTILCDR 115
Query: 428 FTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
F+G +G AY++F D + + +A+ ++ +F G+ L +
Sbjct: 116 FSGHPKGFAYIEFSDRDSVQSAIGLHETLFRGRVLKV 152
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 365 KQTVEEQPKKQPIKDAVPGRTKGFTDEC-TAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
+Q +E P+ A P R+ FT F+ + AT E L R+FS GGV I
Sbjct: 78 RQEMESSPRSSSATRAKP-RSASFTHHVRKVFVGGLPPTATNEMLHRYFSHFGGVEEAVI 136
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGER 479
+HDK T RG +V F D V+ + F GK + + R+ PK S R
Sbjct: 137 IHDKQTRTPRGFGFVTFEDPIIADKVVSVHYHEFYGKMVEVKRAEPKADASKSPNR 192
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T++ L +F G V ++ D TG++RG +V + D + +A
Sbjct: 3 FIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAHRP 62
Query: 455 QMFLGKKLSIARSNPKQRKDSS 476
+ G+++ R+ P+Q +SS
Sbjct: 63 HVVDGREVDPKRAVPRQEMESS 84
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 48/78 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F++N++ K + +FFS VG V+ +RI++D+ T KS+G+AYV+F D + + A
Sbjct: 133 DTRTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFADKKFIHPA 192
Query: 450 VAKNKQMFLGKKLSIARS 467
+ Q G+ +++ S
Sbjct: 193 LELTGQELNGQAIAVKTS 210
>gi|365875472|ref|ZP_09415000.1| RNA-binding protein [Elizabethkingia anophelis Ag1]
gi|442588736|ref|ZP_21007546.1| RNA-binding protein [Elizabethkingia anophelis R26]
gi|365756731|gb|EHM98642.1| RNA-binding protein [Elizabethkingia anophelis Ag1]
gi|442561494|gb|ELR78719.1| RNA-binding protein [Elizabethkingia anophelis R26]
Length = 93
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
F+SNIN L F+ G + S +I+ D+ TG+SRG +V+ +++ A+ + N
Sbjct: 4 FISNINYSVKESQLEELFASYGAIQSAKIIMDRETGRSRGFGFVEMPNNDEANTAIESLN 63
Query: 454 KQMFLGKKLSIARSNPKQRK 473
+F GK L+++ + PK+ K
Sbjct: 64 GALFQGKNLNVSEARPKEEK 83
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 105
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI-DDEHLAAAVAKN 453
++ N++ + T ++LRR F G VSS I+ D+ +G+S+G +V+ D E LAA A N
Sbjct: 4 YVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFVEMPSDSEALAAINALN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQ 490
+ G++L + ++ P++ G R P + +S Q
Sbjct: 64 DKEVGGRRLKVNQARPREESGPRGGR-PQSRPRSDQN 99
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT DL+ F+D G V + + D+ TGK RG A+V+ I+D AA++
Sbjct: 1 MTIYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVEMIEDAQEDAAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPKQ 471
+ + ++G++L + ++ PK+
Sbjct: 61 ELDGAEWMGRQLRVNKAKPKE 81
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis]
Length = 218
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ K++++ + EE RE + VE++ + P A K TD + F+ N++
Sbjct: 41 DEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYA 100
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 101 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAIQEALLLNESELHGRQL 159
Query: 463 SI 464
+
Sbjct: 160 KV 161
>gi|226532872|ref|NP_001149957.1| polyadenylate-binding protein 2 [Zea mays]
gi|195635741|gb|ACG37339.1| polyadenylate-binding protein 2 [Zea mays]
Length = 199
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
D+ KR+++ + EE Q + + P +A K D + F+ N++ T
Sbjct: 35 DEMKRRLKEMEEEAAALREMQAKVAKDMQDP--NATTSENKEEMDSRSVFVGNVDYACTP 92
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L +A
Sbjct: 93 EEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVA 151
Query: 466 --RSN 468
R+N
Sbjct: 152 PKRTN 156
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D + +
Sbjct: 169 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRT 228
Query: 449 AVAKNKQMFLGKKLSI 464
++A + +F G+++ +
Sbjct: 229 SMALDDSLFRGRQIKV 244
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ I + DL FFS VG V +RI+ D T +S+G+ YV+F + E + A
Sbjct: 165 DQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVNLA 224
Query: 450 VAKNKQMFLGKKLSI 464
+A N Q LG L I
Sbjct: 225 LALNGQKLLGAPLVI 239
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D + +
Sbjct: 196 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKDSVRT 255
Query: 449 AVAKNKQMFLGKKLSI 464
++A + +F G+++ +
Sbjct: 256 SMALDDSLFRGRQIKV 271
>gi|452845187|gb|EME47120.1| hypothetical protein DOTSEDRAFT_145507 [Dothistroma septosporum
NZE10]
Length = 571
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 378 KDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAY 437
++AVP TK TA L N++ T D+ F V+++RI+ DK K +G Y
Sbjct: 94 REAVPFPTK---PPYTAHLGNLDYNVTSVDIEGFLEGCS-VTTVRIMEDKIDRKPKGFGY 149
Query: 438 VDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
V+F + E L A++K++ F+G+ + I+ ++P +
Sbjct: 150 VEFANPEGLTKALSKSESSFMGRNIKISVADPPK 183
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ KR+++ + EE RE + V+++ + P A K D + F+ N++
Sbjct: 38 DEMKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYA 97
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 98 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQEALLLNESELHGRQL 156
Query: 463 SI 464
+
Sbjct: 157 KV 158
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T ++L+ +FS G V+ ++I+ D TG+SRG ++ F + +
Sbjct: 206 DICKMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSV-DE 264
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + R+ P++ +D +G+
Sbjct: 265 VVKTQHILDGKVIDPKRAIPREEQDKTGK 293
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG ++ + D V +NK
Sbjct: 295 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITY-DTPDAVDRVCENK 353
Query: 455 QM-FLGKKLSIARSNPKQ 471
+ F GK++ I R+ P+
Sbjct: 354 FIEFKGKRIEIKRAEPRH 371
>gi|242004476|ref|XP_002423109.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212506055|gb|EEB10371.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ A E+L + F G ++ + IL +K+ G +G AY++F D + +
Sbjct: 92 VDNRSIYVGNVDYGANAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFADKDSVQT 151
Query: 449 AVAKNKQMFLGKKLSIARSNPKQ 471
A+A ++ +F G+++ + NPK+
Sbjct: 152 AMAMDESLFRGRQIKV---NPKR 171
>gi|413918640|gb|AFW58572.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 390
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G+ +G D T F+SN++ ++ + L R F+ G V I+ D TG+S G AY++F+
Sbjct: 208 GQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLH 267
Query: 443 DEHLAAAVAKNKQMFLGKKLSIAR 466
E A+ N F+ + L + R
Sbjct: 268 KESAEQALTLNGTSFMSRILKVVR 291
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
F+D+ F+ N+ L F G V + +++DK TG+SRG +V E +
Sbjct: 82 FSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVE 141
Query: 448 AAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQ 486
AAV + N + G+ L + P R+ SS +RAP +A
Sbjct: 142 AAVEQFNGYILDGRSLRVNSGPPPPREQSS-QRAPRGEAN 180
>gi|363752247|ref|XP_003646340.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889975|gb|AET39523.1| hypothetical protein Ecym_4483 [Eremothecium cymbalariae
DBVPG#7215]
Length = 355
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+S+I + T E L F DVG ++ I ILH+K TG+ +G AY++F E +A A
Sbjct: 81 DTRSIFVSSITPETTAETLETHFKDVGMINRITILHNKRTGEPKGYAYIEFEMVESVAKA 140
Query: 450 VAKNKQMFLGKKLSIAR 466
+ N F K +++A+
Sbjct: 141 LELNGSEFNNKIITVAK 157
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ I + DL FFS VG V +RI+ D T +S+G+ YV+F + E + A
Sbjct: 248 DQRTVFILQIARQTRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVNLA 307
Query: 450 VAKNKQMFLGKKLSI 464
+A N Q LG L I
Sbjct: 308 LALNGQKLLGAPLVI 322
>gi|402574395|ref|YP_006623738.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
meridiei DSM 13257]
gi|402255592|gb|AFQ45867.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
meridiei DSM 13257]
Length = 83
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N+ T E+L +FFS+ G V S RI+ D+ TG+SRG +++ D + A
Sbjct: 3 TTLYVGNLPWNTTAEELGQFFSEYGQVESSRIITDRETGRSRGFGFIEVEDMDAARMAEE 62
Query: 452 KNKQMFLGKKLSIARSNPKQ 471
N + F G+ L++ + PKQ
Sbjct: 63 LNGKDFGGRPLTVNEAKPKQ 82
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +SR
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSR 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVRLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA-- 449
C F+ +N + T E L+ +FS G V ++I+ D +G+SRG ++ F EH ++
Sbjct: 229 CKLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSF---EHPSSVDE 285
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSG 477
V K++ + GK + R+ P++ +D +G
Sbjct: 286 VVKSQHILDGKVIDPKRAIPREEQDKTG 313
>gi|223949785|gb|ACN28976.1| unknown [Zea mays]
gi|413957028|gb|AFW89677.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 411
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 163 DQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 222
Query: 450 VAKNKQMFLGKKLSI 464
+A + Q+ LG+++ +
Sbjct: 223 IALSGQLLLGQQVMV 237
>gi|431895473|gb|ELK04989.1| Protein RRP5 like protein [Pteropus alecto]
Length = 2041
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 8 LEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYL 67
LE+Q + ++LS + ++ ++ K + S D ++R + P SS LWL Y +
Sbjct: 1749 LEKQKAEKELS---RIEEALMDPKRQPESADD------FDRLVLSSPNSSILWLQYMAFH 1799
Query: 68 DKTLKVGNVVRDVYSRATKNCPWVGE-----LWVRSLLSLERSRASEEEISTVFEKSLLC 122
+ ++ R V RA K + E +WV +LL+LE S+E ++ VFE+++
Sbjct: 1800 LQATEIEKA-RAVAERALKTISFREEQEKLNVWV-ALLNLENMYGSQESLTKVFERAV-- 1855
Query: 123 AFSTFEEYLDLFLTRID------------GLRRRIL--FSGEVEGVLDYS--LIR----E 162
+ E L +FL D L R+L F E + Y L+R E
Sbjct: 1856 ---QYNEPLKVFLQLADIYTKSEKFQEASELYNRMLKRFRQEKTVWIKYGAFLLRRGQAE 1912
Query: 163 TFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQS 222
R E + N + + + A +A LE +G D A+ ++E L I + W
Sbjct: 1913 ASHRVMQRALECLPNKEHV-DVIAKFAQLEFQLG-DAERAKALFENTLSIYPKRTDVWSV 1970
Query: 223 YISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDF 273
YI M I+ E R I++R + +L +E+++GT +D
Sbjct: 1971 YIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDV 2021
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 6 AHLEEQISRQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQ 65
+H Q + + L + E + + E GD R + L+E ++ +P +D+W +
Sbjct: 1914 SHRVMQRALECLPNKEHVDVIAKFAQLEFQLGDAERAKALFENTLSIYPKRTDVW---SV 1970
Query: 66 YLDKTLKVGNV--VRDVYSRAT--KNCPWVGELWVRSLLSLERSRASEEEISTVFEKSL 120
Y+D T+K G+ VRD++ R P + + + L E+ +E+++ +V K+L
Sbjct: 1971 YIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQSVKAKAL 2029
>gi|413918635|gb|AFW58567.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G+ +G D T F+SN++ ++ + L R F+ G V I+ D TG+S G AY++F+
Sbjct: 524 GQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLH 583
Query: 443 DEHLAAAVAKNKQMFLGKKLSIAR 466
E A+ N F+ + L + R
Sbjct: 584 KESAEQALTLNGTSFMSRILKVVR 607
>gi|449463793|ref|XP_004149616.1| PREDICTED: uncharacterized protein LOC101209889 [Cucumis sativus]
Length = 706
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F+SN++ AT + L R F+ G V + I+ D TG+ +G AYV+F+ E A
Sbjct: 534 DARTIFVSNVHFAATKDSLSRHFNKFGEVLKVIIVTDATTGQPKGSAYVEFMRKESAENA 593
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSS 476
++ + F+ + L + R N Q + +S
Sbjct: 594 LSLDGTSFMSRILKVVRKNASQLEGAS 620
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E +
Sbjct: 3 ADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRT 62
Query: 449 AVAKNKQMFLGKKLSI 464
++A ++ +F G+++ +
Sbjct: 63 SLALDESLFRGRQIKV 78
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + DL FFS VG VS +RI+ D+ + +S+G+AY++F D + A
Sbjct: 117 DQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLA 176
Query: 450 VAKNKQMFLGKKLSIARSNP-KQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
+ + Q LG + + + K R + ER + G+ + + E+ ++
Sbjct: 177 IGLSGQKLLGAPIMVMLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNIT-EAMVKAVF 235
Query: 509 QSRGRGDSVQL 519
+ G DSVQL
Sbjct: 236 EPFGTVDSVQL 246
>gi|357164112|ref|XP_003579952.1| PREDICTED: uncharacterized protein LOC100837530 [Brachypodium
distachyon]
Length = 689
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G+ +G D T F++N++ AT + L R F+ G V I+ D TG+ G AY++F+
Sbjct: 503 GQPEGGPDSRTVFVNNVHFAATKDALSRHFNKFGAVLKTLIVTDGVTGQPTGSAYIEFLQ 562
Query: 443 DEHLAAAVAKNKQMFLGKKLSIAR 466
E A+ N F+ + L + R
Sbjct: 563 KESAEQALTLNGTSFMSRILKVVR 586
>gi|226494638|ref|NP_001148871.1| RNA recognition motif family protein [Zea mays]
gi|195622800|gb|ACG33230.1| RNA recognition motif family protein [Zea mays]
Length = 706
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G+ +G D T F+SN++ ++ + L R F+ G V I+ D TG+S G AY++F+
Sbjct: 524 GQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLH 583
Query: 443 DEHLAAAVAKNKQMFLGKKLSIAR 466
E A+ N F+ + L + R
Sbjct: 584 KESAEQALTLNGTSFMSRILKVVR 607
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ KR+++ + EE RE + V+++ + P A K D + F+ N++
Sbjct: 38 DEMKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYA 97
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 98 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQEALLLNESELHGRQL 156
Query: 463 SI 464
+
Sbjct: 157 KV 158
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ + LKAT D+ FFS G V +R++ D+ + +S+G+ YV+F D + A
Sbjct: 19 DQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMA 78
Query: 450 VAKNKQMFLGKKLSIARS 467
+ + Q+ LG+ + + S
Sbjct: 79 ITLSGQLLLGQPVMVKPS 96
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +FS G V ++I+ D TG+SRG ++ F D+
Sbjct: 155 DICKMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTF-DEPSSVDE 213
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + R+ P++ +D +G+
Sbjct: 214 VVKTQHILDGKVIDPKRAIPREEQDKTGK 242
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG +V + D V +NK
Sbjct: 244 FVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTY-DSPDAVDRVCQNK 302
Query: 455 QM-FLGKKLSIARSNPKQ 471
+ F GKK+ I R+ P+
Sbjct: 303 FIDFKGKKIEIKRAEPRH 320
>gi|453080432|gb|EMF08483.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F VG ++ + IL DKFTG +G AYV+F + + + +A
Sbjct: 67 DNRSIFVGNVDYGASPEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQFVTSA 126
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F + + +
Sbjct: 127 LVLNESVFRNRNIKVV 142
>gi|428224332|ref|YP_007108429.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
gi|427984233|gb|AFY65377.1| RNP-1 like RNA-binding protein [Geitlerinema sp. PCC 7407]
Length = 90
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT ED+R F++ G V + + D+ TG+ RG A+VD DD +A+
Sbjct: 1 MTIYVGNLSYQATEEDVRSVFAEYGTVERVVLPTDRETGRMRGFAFVDLTDDSTEDSAIE 60
Query: 452 K-NKQMFLGKKLSIARSNPKQ 471
+ N ++G++L + ++ P++
Sbjct: 61 ELNGAEWMGRQLRVNKAKPRE 81
>gi|367041013|ref|XP_003650887.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
gi|346998148|gb|AEO64551.1| hypothetical protein THITE_2110808 [Thielavia terrestris NRRL 8126]
Length = 193
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ + E+L+ F G ++ + IL DKFTG +G AYV+F + +A
Sbjct: 65 VDNRSIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVAQ 124
Query: 449 AVAKNKQMFLGKKLSI 464
A+ N +F G+ + +
Sbjct: 125 ALVLNDSVFKGRNIKV 140
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Query: 387 GFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHL 446
G T+ F+ ++ T E L+ F G + S R++ D+ TGKSRG YVDF+D
Sbjct: 283 GSTEIKNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGA 342
Query: 447 AAAVAKNKQMFLGKKLSIARSNPKQRKDSSG 477
AA+ G+ +++ S P+ +D G
Sbjct: 343 KAALEMAGTELDGRTINVDLSAPRPPRDGPG 373
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 375 QPIKDAVPGRT--KGFTDECTA-----FLSNINLKATYEDLRRFFSDVGGVSSIRILHDK 427
+P +D PG T K F DE +A F+ N++ ++T + + FSD GGV+S+R+ D
Sbjct: 366 RPPRDG-PGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDM 424
Query: 428 FTGKSRGLAYVDFIDDEHLAAAVAKNKQM----FLGKKLSIARSNPKQ 471
TG+ +G AYV+F D + AV + + G+++ + S P+Q
Sbjct: 425 ETGRPKGFAYVEFGDVDSAKKAVDQGRSSEGLEIDGRRVRLDFSQPRQ 472
>gi|19112520|ref|NP_595728.1| translation initiation factor (predicted) [Schizosaccharomyces
pombe 972h-]
gi|12230560|sp|O14369.1|SCE3_SCHPO RecName: Full=Probable RNA-binding protein sce3
gi|2293058|emb|CAA03989.1| putative RNA-binding protein [Schizosaccharomyces pombe]
gi|3006181|emb|CAA18401.1| translation initiation factor (predicted) [Schizosaccharomyces
pombe]
Length = 388
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
TA + N++ T DL FF + GV+SIR++ D T +SRG YV+F + L+AA+A
Sbjct: 95 TAHVGNLSFDLTENDLGDFFGE--GVTSIRLVIDPLTERSRGFGYVEFETADTLSAALAL 152
Query: 453 NKQMFLGKKLSIARSNPKQ 471
+ + +G+ + I + P++
Sbjct: 153 SGEDLMGRPVRITVAEPRR 171
>gi|397468279|ref|XP_003805819.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan paniscus]
Length = 278
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT--KGFTDECTAFLSNINLKATYEDLR 409
VQ AEE EG Q + P+ + +PG K D + ++ N++ + E+L
Sbjct: 109 VQQQAEEEEGTAAGQLL--SPETTGCR--LPGTPEEKVEADHRSVYVGNVDYGGSAEELE 164
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 165 AHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 219
>gi|340716338|ref|XP_003396656.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus terrestris]
gi|350406230|ref|XP_003487700.1| PREDICTED: polyadenylate-binding protein 2-like [Bombus impatiens]
Length = 228
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G ++ + IL +KF G +G AY++F + + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFAERDSVQT 156
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ MF G+++ +
Sbjct: 157 AMAIDESMFRGRQIKV 172
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 184 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 243
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 244 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 286
>gi|343427636|emb|CBQ71163.1| related to HRP1-subunit of cleavage factor I [Sporisorium reilianum
SRZ2]
Length = 588
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
+E F+ +N T + LRR+FS G V ++ D TG+SRG A+++F++ + +
Sbjct: 163 MPEEGKMFIGGLNWDTTEDSLRRYFSQFGEVGHCTVMRDNMTGRSRGFAFLNFVNPKAVN 222
Query: 448 AAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
V + + GK + R+ P+ ++DS+
Sbjct: 223 TVVVR-EHYLDGKVIDPKRAIPRPQRDSN 250
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + T R FF G ++ + D+ TG RG ++ + DD L ++
Sbjct: 285 FVGGLPASVTPASFRMFFEQFGTLAECTCMMDRETGNPRGFGFLTYQDDAALQHVLSTRP 344
Query: 455 QMFLGKKLSIARSNPKQ 471
+F GK++ + R+ K
Sbjct: 345 LVFDGKEVDVKRAQSKN 361
>gi|332846661|ref|XP_003315290.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Pan
troglodytes]
Length = 266
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRT--KGFTDECTAFLSNINLKATYEDLR 409
VQ AEE EG Q + P+ + +PG K D + ++ N++ + E+L
Sbjct: 109 VQQQAEEEEGTAAGQLL--SPETTGCR--LPGTPEEKVEADHRSVYVGNVDYGGSAEELE 164
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
FS G V + IL DKF+G +G AY++F + AAV ++ +F G+ + +
Sbjct: 165 AHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKV 219
>gi|226294952|gb|EEH50372.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1304
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYL-----DKTLKVGNVVRDVYS--RATKNCPWVGEL 94
V LY+RA+ FP W DY +L ++ + + ++ S RAT++CPW G L
Sbjct: 518 VCALYQRAVLRFPTDVTFWEDYIMFLVEESMNQRGRHNAYIPNLPSLERATRHCPWSGSL 577
Query: 95 WVRSLLSLERSRASEEEISTVFEKSL---LCAFSTFEEYLDLFLTRIDGLRRR 144
W + +LS ER+ S +I+ V K+ L +E + + T LRRR
Sbjct: 578 WSQHILSAERAGRSFTQIADVKHKATRTGLLDTGGVDEVIKVHTTWCSYLRRR 630
>gi|115467128|ref|NP_001057163.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|51535367|dbj|BAD37238.1| putative poly(A) binding protein II [Oryza sativa Japonica Group]
gi|113595203|dbj|BAF19077.1| Os06g0219600 [Oryza sativa Japonica Group]
gi|215704439|dbj|BAG93873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765746|dbj|BAG87443.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635211|gb|EEE65343.1| hypothetical protein OsJ_20615 [Oryza sativa Japonica Group]
Length = 204
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 346 DKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
D+ KR+++ + EE QT + + +A +K D + ++ N++ T
Sbjct: 36 DEMKRRLKEMEEEANALREMQTKVAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTP 95
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + AV N+ G+++ +A
Sbjct: 96 EEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVA 154
Query: 466 --RSNPKQRKDSSGERA 480
R+N K G R
Sbjct: 155 PKRTNVPGMKQPRGGRG 171
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +FS G V ++I+ D TG+SRG ++ F +
Sbjct: 120 DSCKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTF-ESASSVDE 178
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + R+ P++ +D +G+
Sbjct: 179 VVKTQHILDGKVIDPKRAIPREEQDKTGK 207
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG ++ + D V +NK
Sbjct: 209 FVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITY-DTPDAVDKVCQNK 267
Query: 455 QM-FLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSAS 499
+ F G+K+ I R+ P+ + + G R P +Q+ + Q G+++S
Sbjct: 268 FIDFKGRKIEIKRAAPRHLQKTGGARQPAQQSSNSQYGMGTGSNSS 313
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ K++++ + EE RE + VE++ + P + K TD + F+ N++
Sbjct: 37 DEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGTSASQAGKEETDSRSVFVGNVDYA 96
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 97 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQEALVLNESELHGRQL 155
Query: 463 SI 464
+
Sbjct: 156 KV 157
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ I + DL FFS VG V +RI+ D T +S+G+ YV+F + E + A
Sbjct: 151 DQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVNLA 210
Query: 450 VAKNKQMFLGKKLSI 464
+A N Q LG L I
Sbjct: 211 LALNGQKLLGAPLVI 225
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
++ NI+L+ T ++ R F G ++S + HD TGKSRG +V+F+ E A AV
Sbjct: 238 TNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGFGFVNFVKHESAAKAVD 297
Query: 452 K-NKQMFLGKKLSIARSNPKQRKD 474
+ N + + G+KL + R+ K ++
Sbjct: 298 ELNDKDWKGQKLYVGRAQKKHERE 321
>gi|159487321|ref|XP_001701671.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280890|gb|EDP06646.1| predicted protein [Chlamydomonas reinhardtii]
Length = 146
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N+ KAT E ++ FF+ G SS+ IL DK T K+RG+A+V+ +D E + AA+ +N
Sbjct: 51 WVGNLPFKATQEQIQSFFNPYGA-SSVFILRDKETRKNRGMAFVN-VDPEKMDAAIREND 108
Query: 455 -QMFLGKKLSIARSN 468
+ F+G+ L +A+SN
Sbjct: 109 GKDFMGRALKVAKSN 123
>gi|326507886|dbj|BAJ86686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 751
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 356 AEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDV 415
A E G+ + E + +++ + D R + E F+ ++ +A ED+R+ FS V
Sbjct: 210 AAEKHGQAAGEVKENEDERKVMSDMAKNRQR--KKELEIFVGGLDREAVEEDIRKVFSQV 267
Query: 416 GGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQ-MFLGKKLSIARS 467
G V +R+ D T K++G A+V F + E +A A+A+ K M GK+ +A S
Sbjct: 268 GDVVEVRLHKDFSTSKNKGFAFVRFANKEQVARALAEMKNPMIHGKRCGVAAS 320
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 6/128 (4%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ K++++ + EE RE + VE++ + P A + D + F+ N++
Sbjct: 41 DEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYA 100
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+A N+ G++L
Sbjct: 101 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQEALALNESELHGRQL 159
Query: 463 SIA--RSN 468
++ R+N
Sbjct: 160 KVSPKRTN 167
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ NI ++AT E+ R F G V+S + D + KSRG +V+FI+ EH A AV + N
Sbjct: 246 YVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKAVDELN 305
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G+ L + R+ K ++
Sbjct: 306 GKDFKGQDLYVGRAQKKHERE 326
>gi|241812106|ref|XP_002414600.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508811|gb|EEC18265.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 221
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T ++SN+ K T DL + F G V+ + ++ DK T KS+G+A+V F+D + A VA
Sbjct: 11 TVYVSNLPYKLTNNDLHQLFEKYGKVAKVTVMKDKQTWKSKGVAFVLFVDGDSAARCVAA 70
Query: 453 -NKQMFLGKKL--SIARSN 468
++Q +G+ L SIA+ N
Sbjct: 71 LDQQQLMGRTLRASIAKYN 89
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 113 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 172
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 173 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 215
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 113 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 172
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 173 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 215
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 113 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 172
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 173 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 215
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDDEHLAAAV 450
+ F+ N+ + + +DL++ F+D G V S+R+ D+ TG+ RG A+V+ + E AA
Sbjct: 1 MSIFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQ 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSS 476
A + ++G+ L ++++ P++ K SS
Sbjct: 61 ALDGAKWIGRSLKVSKARPREDKRSS 86
>gi|398410594|ref|XP_003856645.1| hypothetical protein MYCGRDRAFT_30158, partial [Zymoseptoria
tritici IPO323]
gi|339476530|gb|EGP91621.1| hypothetical protein MYCGRDRAFT_30158 [Zymoseptoria tritici IPO323]
Length = 298
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 395 FLSNINLKATYED-LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
F+ N+ A E+ L R FS G V S+R++ D T +G+AYV F D+ + AA+ N
Sbjct: 156 FIGNLGFPADVEEGLWRTFSKCGTVESVRVIRDSTTRVGKGIAYVQFTDENAVEAALLYN 215
Query: 454 KQMF---LGKKLSIARSNPKQRKDSSGERAPTEQAQS 487
++ F L +KL + R+ +R G PT ++++
Sbjct: 216 EKKFPPMLPRKLRVTRAKAIKRNAKPGSGRPTTKSRA 252
>gi|395830356|ref|XP_003788297.1| PREDICTED: RNA-binding protein 39 [Otolemur garnettii]
Length = 453
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 110 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 169
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
G+AYV+F+D + A+ Q LG + + S
Sbjct: 170 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQAS 203
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P +QP+ + P T C + I + DL FFS VG V +RI+ D+
Sbjct: 149 EKSPVRQPVDNLSPEERDARTVLCMQLAARIRPR----DLEDFFSAVGKVRDVRIISDRN 204
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F D + + A+ Q LG + + S
Sbjct: 205 SRRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQAS 243
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 113 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 172
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 173 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 215
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 63/119 (52%), Gaps = 22/119 (18%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATYE 406
E+NE +TK+ EEQP++ AVP +T DE A FL NI + E
Sbjct: 311 EQNESLDTKK--EEQPER-----AVPQKT----DEELAIEKINQTGRLFLRNILYTSKEE 359
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
D R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 360 DFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVELDKQIFQGRLLHI 418
>gi|393246337|gb|EJD53846.1| RNA-binding domain-containing protein, partial [Auricularia
delicata TFB-10046 SS5]
Length = 170
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 378 KDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAY 437
KDAV R+ ++ N++ A+ E+++ F G ++ + IL DKFTG +G AY
Sbjct: 43 KDAVDARS--------VYVGNVDYSASPEEIQAHFQSCGTINRVTILCDKFTGHPKGYAY 94
Query: 438 VDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
V+F + + A+ N+ +F G+ + +
Sbjct: 95 VEFAEPAFVQHAMVLNESLFRGRLIKVV 122
>gi|307109776|gb|EFN58013.1| hypothetical protein CHLNCDRAFT_57088 [Chlorella variabilis]
Length = 546
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F N+ L+A +++ +FF G ++ I+++ DK TG+S+G AY++F E + A
Sbjct: 137 DTRTVFAYNLPLRAEEKEIFQFFIKAGPLNDIKVITDKTTGRSKGFAYIEFQRKEDVINA 196
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQ 490
+A Q+ +G+ + + S + K+ + E A EQA+ Q+
Sbjct: 197 LALTGQVLMGQAVMVKMS--EAEKNLAWEAA--EQAKRQQK 233
>gi|291403543|ref|XP_002718110.1| PREDICTED: RNA binding motif protein 23 isoform 3 [Oryctolagus
cuniculus]
Length = 428
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P +QP+ + P T C + I + DL FFS VG V +RI+ D+
Sbjct: 133 EKSPVRQPVDNLSPEERDARTVLCMQLAARIRPR----DLEDFFSAVGKVRDVRIISDRN 188
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F D + + A+ Q LG + + S
Sbjct: 189 SRRSKGIAYVEFCDIQAVPLAIGLTGQRLLGVPIMVQAS 227
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ I + DL FFS VG V +RI+ D T +S+G+ YV+F + E + A
Sbjct: 96 DQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVNLA 155
Query: 450 VAKNKQMFLGKKLSI 464
+A N Q LG L I
Sbjct: 156 LALNGQKLLGAPLVI 170
>gi|345860560|ref|ZP_08812871.1| RNA recognition motif family protein [Desulfosporosinus sp. OT]
gi|344326414|gb|EGW37881.1| RNA recognition motif family protein [Desulfosporosinus sp. OT]
Length = 83
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N+ T ++L +FFS+ G V S RI+ D+ TG+SRG +++ + + AV
Sbjct: 3 TTLYVGNLPWNTTADELGQFFSEYGQVESSRIITDRETGRSRGFGFIEVEEADAERMAVE 62
Query: 452 KNKQMFLGKKLSIARSNPKQ 471
N + F G+ L++ + PKQ
Sbjct: 63 LNGKDFGGRPLTVNEAKPKQ 82
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 104 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 163
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 164 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 206
>gi|413936733|gb|AFW71284.1| hypothetical protein ZEAMMB73_459562 [Zea mays]
Length = 228
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ T E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + A
Sbjct: 121 DSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEA 179
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ N+ G++L +A PK R + G + P
Sbjct: 180 IKLNESELHGRQLKVA---PK-RTNVPGMKQP 207
>gi|308505322|ref|XP_003114844.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
gi|308259026|gb|EFP02979.1| hypothetical protein CRE_28621 [Caenorhabditis remanei]
Length = 85
Score = 55.1 bits (131), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N + + E++ FFS+VG V+++RI++D+ TG+ RG A+V+F D+ AV +
Sbjct: 7 SVYVGNAPFQTSEEEIGNFFSNVGNVTNVRIVYDRETGRPRGFAFVEFADEAGAQKAVQE 66
Query: 453 -NKQMFLGKKLSIARSNPK 470
N F G++L + +N K
Sbjct: 67 LNGAEFNGRQLRVNLANNK 85
>gi|226532724|ref|NP_001151236.1| RNA binding protein [Zea mays]
gi|195645238|gb|ACG42087.1| RNA binding protein [Zea mays]
Length = 257
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+A++ N++ DLR FF ++S+R DK TG SRG +V+F DDE L A+A
Sbjct: 179 SAYVGNLSWNVDENDLRGFFGP-SKIASVRFAVDKRTGGSRGFCHVEFQDDESLEKAIAM 237
Query: 453 NKQMFLGKKLSIARS 467
N+ G+ + +A S
Sbjct: 238 NQSKLQGRPVKVAYS 252
>gi|194697124|gb|ACF82646.1| unknown [Zea mays]
gi|414864467|tpg|DAA43024.1| TPA: RNA binding protein [Zea mays]
Length = 257
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+A++ N++ DLR FF ++S+R DK TG SRG +V+F DDE L A+A
Sbjct: 179 SAYVGNLSWNVDENDLRGFFGP-SKIASVRFAVDKRTGGSRGFCHVEFQDDESLEKAIAM 237
Query: 453 NKQMFLGKKLSIARS 467
N+ G+ + +A S
Sbjct: 238 NQSKLQGRPVKVAYS 252
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G ++ + IL ++F G +G AY++F D + +
Sbjct: 97 VDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKGFAYIEFGDRDSVQT 156
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
A+A ++ +F G+++ + + S+ R P
Sbjct: 157 AMAMDESLFRGRQIKVMPKRTNRPGISTTNRPP 189
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 102 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 161
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 162 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 204
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 113 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 172
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 173 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 215
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 55.1 bits (131), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G V+ + IL DKF+G +G AY++F D E + +
Sbjct: 5 DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTS 64
Query: 450 VAKNKQMFLGKKLSI 464
+A ++ +F G+++ +
Sbjct: 65 LALDESLFRGRQIKV 79
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTQQKPKRSGGFPK---VFLGGLPSNVTETDLRSF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D++ + VA++ GK++ I R+ P
Sbjct: 123 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 181 -RDSSSKMNDSHQGQ 194
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+F G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPKQRK 473
G+ + NP+ ++
Sbjct: 76 HQLDGRTIDPKPCNPRTQQ 94
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 141 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 200
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 201 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 243
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 191 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 250
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 251 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 293
>gi|375012528|ref|YP_004989516.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
gi|359348452|gb|AEV32871.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
Length = 111
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+ ++ EDLR F G V S+RI+ DKFTG+S+G +V+ DD+ A+ + N
Sbjct: 4 FVGSLPWATEEEDLRGAFEAYGEVDSVRIITDKFTGRSKGFGFVEMPDDDAAQKAIDELN 63
Query: 454 KQMFLGKKLSIARSNPK 470
F G+ + + +S PK
Sbjct: 64 GSQFGGRDIVVNKSEPK 80
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 141 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 200
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 201 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 243
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T F+ +N AT E++R F G VS +R+ KSRG A++DF E AA+A
Sbjct: 81 TTVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMA 140
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ F+G+ + + + P Q + + P
Sbjct: 141 LDGTEFMGRTIRVDDAQPAQGRSTDTNYGP 170
>gi|158292594|ref|XP_313998.3| AGAP005117-PA [Anopheles gambiae str. PEST]
gi|157017065|gb|EAA09415.5| AGAP005117-PA [Anopheles gambiae str. PEST]
Length = 221
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+L F G ++ + IL +K G +G AY++F E
Sbjct: 87 KAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEF 146
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQ 471
+ A+A N+ +F G+++ + NPK+
Sbjct: 147 VETALAMNETLFRGRQIKV---NPKR 169
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTQQKPKRSGGFPK---VFLGGLPSNVTETDLRSF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D++ + VA++ GK++ I R+ P
Sbjct: 123 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 181 -RDSSSKMNDSHQGQ 194
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+F G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPKQRK 473
G+ + NP+ ++
Sbjct: 76 HQLDGRTIDPKPCNPRTQQ 94
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGN 493
G+AYV+F+D + A+ Q LG + + S ++ + ++ ++ Q G+
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA--------MANNLQKGS 246
Query: 494 AG 495
AG
Sbjct: 247 AG 248
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 132 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 191
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 192 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 234
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|393215597|gb|EJD01088.1| polyadenylate-binding protein 2 [Fomitiporia mediterranea MF3/22]
Length = 201
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
DE + ++ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + + A
Sbjct: 81 DERSVYVGNVDYGASPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAEPSFVETA 140
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
N+ +F G+ + + R+N
Sbjct: 141 QTLNESLFKGRLIKVVPKRTN 161
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 102 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 161
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 162 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 204
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 126 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 185
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 186 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 228
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TD + F+ N++ T E++++ F G V+ + IL DKF G+ +G AYV+F++ E +
Sbjct: 83 TDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEAEAVQE 141
Query: 449 AVAKNKQMFLGKKLSI 464
A+ N+ G++L +
Sbjct: 142 ALVLNESELHGRQLKV 157
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 113 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 172
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 173 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 215
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 139 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 198
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 199 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 241
>gi|413957027|gb|AFW89676.1| hypothetical protein ZEAMMB73_900995 [Zea mays]
Length = 396
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 163 DQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 222
Query: 450 VAKNKQMFLGKKLSI 464
+A + Q+ LG+++ +
Sbjct: 223 IALSGQLLLGQQVMV 237
>gi|341895192|gb|EGT51127.1| hypothetical protein CAEBREN_00953 [Caenorhabditis brenneri]
Length = 205
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E++ + F G V+ + IL DKF+G +G AYV+F + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 131
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ A+A + G+++ + + + S+ R P
Sbjct: 132 MQNALAMTDSLLRGRQIKVDQKRTNRPGLSTTNRPP 167
>gi|340503237|gb|EGR29847.1| RNA binding protein, putative [Ichthyophthirius multifiliis]
Length = 304
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
TA + N +A ED R FF D G + I+IL + G+AY+ F + + L A+ K
Sbjct: 104 TALIQKFNEEAKEEDFREFFEDCGIILQIKILKNTNNFVGDGMAYLFFKEKKGLENALLK 163
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGE 478
N + FLGKK+ I R+ + + GE
Sbjct: 164 NGKNFLGKKIRIQRAEEEFQTQKQGE 189
>gi|444729178|gb|ELW69605.1| RNA-binding protein 39 [Tupaia chinensis]
Length = 467
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
G+AYV+F+D + A+ Q LG + + S
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQAS 228
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTQQKPKRSGGFP---KVFLGGLPSNVTETDLRSF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D++ + VA++ GK++ I R+ P
Sbjct: 123 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 181 -RDSSSKMNDSHQGQ 194
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+F G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPKQRK 473
G+ + NP+ ++
Sbjct: 76 HQLDGRTIDPKPCNPRTQQ 94
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 55.1 bits (131), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N++ T DLR F+ G V+ + ++ DKFTG+S+G +V+ ++ H AA+ N
Sbjct: 4 YVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKGLN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGER 479
G+ + + + P+ + SSG R
Sbjct: 64 GTDLQGRSIKVNEAKPRSDRGSSGRR 89
>gi|398019614|ref|XP_003862971.1| RNA-binding protein, putative [Leishmania donovani]
gi|322501202|emb|CBZ36281.1| RNA-binding protein, putative [Leishmania donovani]
Length = 214
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 349 KRQVQNLAEENEGRETKQTV---EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
KRQV++L E+ + + +++ E K A G+TK T + F+ +++L+ T
Sbjct: 33 KRQVESLQEDMQLKALQESAAKDEGTRKTAAAAAASSGQTKTNT---SIFVGDLDLRTTD 89
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
DLR FF+ G ++ + +L D+ G +G AYV+F + AA+ K+ Q GK L +A
Sbjct: 90 ADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFETEGQAHAAILKDGQSLHGKPLKVA 148
>gi|146093988|ref|XP_001467105.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071469|emb|CAM70158.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 7/120 (5%)
Query: 349 KRQVQNLAEENEGRETKQTV---EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
KRQV++L E+ + + +++ E K A G+TK T + F+ +++L+ T
Sbjct: 33 KRQVESLQEDMQLKALQESAAKDEGTRKTAAAAAASSGQTKTNT---SIFVGDLDLRTTD 89
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
DLR FF+ G ++ + +L D+ G +G AYV+F + AA+ K+ Q GK L +A
Sbjct: 90 ADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFETEGQAHAAILKDGQSLHGKPLKVA 148
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 118 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 177
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 178 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 220
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +F+ G V ++I+ D TG+SRG ++ F ++
Sbjct: 162 DSCKMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTF-ENASSVDE 220
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSG 477
V K + + GK + R+ P++ +D +G
Sbjct: 221 VVKTQHILDGKVIDPKRAIPREEQDKTG 248
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG +V + D V ++K
Sbjct: 251 FVGGIGADVRPKEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTY-DSPDAVDRVCQSK 309
Query: 455 QM-FLGKKLSIARSNPKQRKDSSGE 478
+ F GK++ I R+ P+ + +SG+
Sbjct: 310 YIEFKGKQIEIKRAEPRNNQKASGQ 334
>gi|312373984|gb|EFR21644.1| hypothetical protein AND_16675 [Anopheles darlingi]
Length = 229
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E+L F G ++ + IL +K G +G AY++F E
Sbjct: 87 KAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEF 146
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQ 471
+ A+A N+ +F G+++ + NPK+
Sbjct: 147 VETALAMNETLFRGRQIKV---NPKR 169
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 118 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 177
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 178 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 220
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
F+D+ F+ N+ L F G V + +++DK TG+SRG +V E +
Sbjct: 82 FSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVE 141
Query: 448 AAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQ 486
AAV + N + G+ L + P R+ SS RAP +A
Sbjct: 142 AAVEQFNGYILDGRSLRVNSGPPPPREQSS-RRAPRGEAN 180
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ I + DL FFS VG V +RI+ D T +S+G+ YV+F + E + A
Sbjct: 265 DQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVNLA 324
Query: 450 VAKNKQMFLGKKLSI 464
+A N Q LG L I
Sbjct: 325 LALNGQKLLGAPLVI 339
>gi|426243462|ref|XP_004015574.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Ovis aries]
Length = 272
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 342 KKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINL 401
++ E +VQ+L +EG E + + P D+ K D + ++ N++
Sbjct: 96 EQAQGPELPRVQDL---DEGEEAAGALLARQLLSPKTDSP--LEKAEADHRSVYVGNVDY 150
Query: 402 KATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKK 461
T ++L +F+ G + + IL DKF+G +G AY++F + AAV +K +F G+
Sbjct: 151 GGTAQELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQAAVELDKSIFRGRV 210
Query: 462 LSI 464
+ +
Sbjct: 211 IKV 213
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 304 DQKEHSV--KKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEG 361
+Q+EH V E+ D++I E + + K++ D +KR + E +
Sbjct: 2 EQEEHEVYGADIPDEEVDMDADIDAEHQEGDEELASNHTTKELEDMKKRLKEIEEEASAL 61
Query: 362 RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVS 419
RE + VE++ + P +V K D + ++ N++ T E++++ F G V+
Sbjct: 62 REMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVN 121
Query: 420 SIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSN 468
+ IL DKF G+ +G AYV+F++ + + A+ N+ G++L ++ R+N
Sbjct: 122 RVTILTDKF-GQPKGFAYVEFVEADAVQNALILNETELHGRQLKVSAKRTN 171
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 168 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 227
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 228 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 270
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 109 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 168
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 169 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 211
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 108 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 167
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 168 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 210
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|219519920|gb|AAI45635.1| Pabpnl1 protein [Mus musculus]
Length = 288
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ + +L +FS G + + IL DKF+G +G AY++F + A
Sbjct: 155 ADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKA 214
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGT----SASKESSI 504
AV ++ F G+ + + PK R + G + T++ +GN S +++ +
Sbjct: 215 AVGLDESTFRGRVIKVL---PK-RTNFPGISS-TDRGGLRTHSGNRAAFLHGSLHRKARL 269
Query: 505 ETSKQSRGRGDSVQ 518
+SRG G + Q
Sbjct: 270 RAHGRSRGHGGAPQ 283
>gi|413918641|gb|AFW58573.1| hypothetical protein ZEAMMB73_910026 [Zea mays]
Length = 199
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID 442
G+ +G D T F+SN++ ++ + L R F+ G V I+ D TG+S G AY++F+
Sbjct: 17 GQPEGGPDSRTVFVSNVHFGSSKDALSRHFNKFGAVLKTHIVTDGVTGQSTGSAYIEFLH 76
Query: 443 DEHLAAAVAKNKQMFLGKKLSIAR 466
E A+ N F+ + L + R
Sbjct: 77 KESAEQALTLNGTSFMSRILKVVR 100
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 379 DAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYV 438
+A P + D C F+ +N T + LR++F+ G V ++I+ D GKSRG ++
Sbjct: 137 NAAPKKADLSKDSCKMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFL 196
Query: 439 DFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
F ++ V K + + GK + R+ P++ +D +G+
Sbjct: 197 TF-ENSSSVDEVVKTQHILDGKVIDPKRAIPREEQDKTGK 235
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTQQKPKRSGGFPK---VFLGGLPSNVTETDLRSF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D++ + VA++ GK++ I R+ P
Sbjct: 123 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 181 -RDSSSKMNDSHQGQ 194
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+F G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPKQRK 473
G+ + NP+ ++
Sbjct: 76 HQLDGRTIDPKPCNPRTQQ 94
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E++ + F G V+ + IL DKF+G +G AYV+F + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 131
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ A+A + G+++ + + SS R P
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTNRPGLSSTNRPP 167
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 111 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 170
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 171 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 213
>gi|449018258|dbj|BAM81660.1| similar to nucleolar RNA-binding protein [Cyanidioschyzon merolae
strain 10D]
Length = 406
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N+ A E++R FSD G + ++RI+ D TG +G AYV F + ++ A+++++
Sbjct: 187 FIGNVPFTANEEEIRSVFSDCGAILNVRIVRDAQTGMGKGFAYVTFAPEANMDLALSRHE 246
Query: 455 QMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQT---GNAGTSA-SKESSIETSKQ 509
+ L G+ L + RS ER +AQ H +T NAG A + +S + + +
Sbjct: 247 TVQLHGRLLRVERSV---------ERLANRRAQ-HGKTDSRSNAGNGARTADSRRKQTPR 296
Query: 510 SRGRG 514
+GRG
Sbjct: 297 HKGRG 301
>gi|444317072|ref|XP_004179193.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
gi|387512233|emb|CCH59674.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
Length = 623
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +F+ G V ++I+ D TGKSRG ++ F +
Sbjct: 168 DSCKMFIGGLNWETTEDGLRDYFNKYGNVVDLKIMKDNNTGKSRGFGFLTF-EKSSSVDE 226
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSG 477
V K + + GK + R+ P++ +D +G
Sbjct: 227 VVKTQHILDGKVIDPKRAIPREEQDKTG 254
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG +V + D V ++K
Sbjct: 257 FIGGIGADVRPKEFEEFFAKYGNIIDAQLMLDKDTGRSRGFGFVTY-DSPDAVDRVCQHK 315
Query: 455 QM-FLGKKLSIARSNPKQRK 473
+ F GK++ I R+ P+ +
Sbjct: 316 FIEFKGKQIEIKRAQPRHNQ 335
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 212 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 271
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 272 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 314
>gi|375145012|ref|YP_005007453.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361059058|gb|AEV98049.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 105
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++SN+ EDL+ FF+ G ++S +I+ D+ TGKSRG +V+ +D A+A+ +
Sbjct: 4 YVSNLGFNVQDEDLKDFFAPYGEITSAKIIMDRETGKSRGFGFVEMPNDAEAKKAIAELD 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ M G+ + + + PK+ K + +P
Sbjct: 64 QAMVEGRAIKVVEARPKEDKPARKNFSP 91
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
PG + F+++ F+ N+ L F G V + +++DK TG+SRG +V
Sbjct: 73 PGGEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMS 132
Query: 442 DDEHLAAAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ + AAV + N + G+ L + S P +D S +R P
Sbjct: 133 SVQEVEAAVEQFNGYVLDGRSLRV-NSGPPPPRDPSSQRGP 172
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA-KN 453
++ N++ T + LR FS+ G V+S +I+ D+ TG S+G +++ DE +AA+A N
Sbjct: 6 YVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAGTN 65
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F G++L + + K R+D
Sbjct: 66 GREFDGRQLRVNEAMDKPRRD 86
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 304 DQKEHSV--KKTGREKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEG 361
+Q+EH V E+ D++I E + + K++ D +KR + E +
Sbjct: 2 EQEEHEVYGADIPDEEVDMDADIDAEHQEGDEELASNHTTKELEDMKKRLKEIEEEASAL 61
Query: 362 RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVS 419
RE + VE++ + P +V K D + ++ N++ T E++++ F G V+
Sbjct: 62 REMQAKVEKEMGAVQDPAGSSVSQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVN 121
Query: 420 SIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSN 468
+ IL DKF G+ +G AYV+F++ + + A+ N+ G++L ++ R+N
Sbjct: 122 RVTILTDKF-GQPKGFAYVEFVEADAVQNALILNETELHGRQLKVSAKRTN 171
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|254568410|ref|XP_002491315.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|238031112|emb|CAY69035.1| Cytoplasmic RNA-binding protein, contains an RNA recognition motif
(RRM) [Komagataella pastoris GS115]
gi|328352168|emb|CCA38567.1| Embryonic polyadenylate-binding protein 2 [Komagataella pastoris
CBS 7435]
Length = 209
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT +L F G V+ + IL DK TG+ +G AYV+F D ++ +
Sbjct: 86 DSKSIYVGNVDFSATPGELAEHFKTCGTVNRVTILMDKVTGRPKGFAYVEFSDPSSVSES 145
Query: 450 VAKNKQMFLGKKLSIA 465
+ N F G+ L +
Sbjct: 146 LVLNDSEFHGRNLKVV 161
>gi|55925591|ref|NP_001007463.1| embryonic polyadenylate-binding protein 2 [Mus musculus]
gi|81910338|sp|Q5XFR0.1|EPAB2_MOUSE RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|54111431|tpg|DAA02003.1| TPA_exp: embryonic poly(A) binding protein 2 [Mus musculus]
gi|223461244|gb|AAI41318.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
gi|223461425|gb|AAI41317.1| Poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 273
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ + +L +FS G + + IL DKF+G +G AY++F + A
Sbjct: 140 ADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKA 199
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGT----SASKESSI 504
AV ++ F G+ + + PK R + G + T++ +GN S +++ +
Sbjct: 200 AVGLDESTFRGRVIKVL---PK-RTNFPGISS-TDRGGLRTHSGNRAAFLHGSLHRKARL 254
Query: 505 ETSKQSRGRGDSVQ 518
+SRG G + Q
Sbjct: 255 RAHGRSRGHGGAPQ 268
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T F+ N++ E L F+D G V S RI+ DK TG+++G YV F + L AA+A
Sbjct: 183 STVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALTAAMA 242
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSS 476
G+++ + S PK +D +
Sbjct: 243 LTGTELDGREIRVDVSTPKPPRDGN 267
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV 450
T FL N++ T +++R FS G + S+R D+ TG +G YV++ D E AV
Sbjct: 281 TTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAV 339
>gi|321477676|gb|EFX88634.1| hypothetical protein DAPPUDRAFT_206317 [Daphnia pulex]
Length = 222
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 47/76 (61%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ AT E+L + F G ++ + IL +K+ G+ +G AY++F D + +
Sbjct: 94 VDARSVFVGNVDYGATAEELEQHFHGCGSINRVTILCNKWDGQPKGFAYIEFGDKDSVQT 153
Query: 449 AVAKNKQMFLGKKLSI 464
A+A ++ +F G+++ +
Sbjct: 154 AMALDESLFRGRQIKV 169
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ T + N++LKA D+ FFS+V G V I+ + D+ +GKS+G+AYV+F + +
Sbjct: 623 DDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVVK 682
Query: 449 AVAKNKQMFLGKKLSIARS 467
A++ N M + + I S
Sbjct: 683 ALSANGYMLKNRPIKIQSS 701
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTQQKPKRSGGFPK---VFLGGLPSNVTETDLRTF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D++ + VA++ GK++ I R+ P
Sbjct: 123 FNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 181 -RDSSSKMNDSHQGQ 194
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+F G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPKQRK 473
G+ + NP+ ++
Sbjct: 76 HQLDGRTIDPKPCNPRTQQ 94
>gi|213409842|ref|XP_002175691.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003738|gb|EEB09398.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 174
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ T E+L+ F++ G ++ + IL DKFTG +G AY++F + + A
Sbjct: 56 DAQSVYVGNVDYSVTPEELQAHFAECGPINRVTILCDKFTGHPKGFAYIEFAEPSVVPNA 115
Query: 450 VAKNKQMFLGKKLSI 464
+ +N M + L +
Sbjct: 116 LLRNGSMLHDRPLKV 130
>gi|345326998|ref|XP_001512144.2| PREDICTED: RNA-binding protein 34-like [Ornithorhynchus anatinus]
Length = 416
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K ++ FSD G V ++RI+ D TG +G YV F + + + A
Sbjct: 273 DKRSVFVGNLAYKIEEASVQEHFSDCGQVVAVRIVRDGVTGAGKGFGYVLFANTDAVQLA 332
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSS 476
+ N +G+KL + RS K++ +S
Sbjct: 333 LKLNNSELMGRKLRVMRSVSKEKTRAS 359
>gi|412985322|emb|CCO20347.1| predicted protein [Bathycoccus prasinos]
Length = 789
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 360 EGRETKQTVEEQPKKQPIKDAVPGRT--KGFTDECTAFLSNINLKATYEDLRRFFSDVGG 417
EGR + ++ +PK PI +A G T + +E +++N+ EDL+ FS G
Sbjct: 575 EGRVVETRIKNEPK-VPIHNASGGDTAQEDVNEEAKLYVANLPSHYEEEDLKTLFSPYGL 633
Query: 418 VSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLG--KKLSIARSNPKQR 472
V S++++ D TG S+G +V +D E ++A VA + M G K L + +N K+R
Sbjct: 634 VQSVKLVLDHTTGLSKGYGFVQMMDQEQAMSAVVAVHGNMVEGCTKPLVVNIANDKKR 691
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F ++ + DL FFS VG V +R++ D T +S+G+AYV+F D E + A
Sbjct: 136 DMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLA 195
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAG 495
+ N Q G + + + +R ++ + A T + S Q GN G
Sbjct: 196 MGLNGQKLFGIPI-VVQPTQAERNRAAAQNAST--SNSTLQRGNVG 238
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|428203095|ref|YP_007081684.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980527|gb|AFY78127.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDDEHLAAAV 450
+ ++ N++ + T EDL R F + G V+ +++ D+ TG+ RG A+V+ + E A
Sbjct: 1 MSIYVGNLSYEVTQEDLERVFKEYGTVNRVQMPTDRETGRPRGFAFVEMGTEAEETTAIE 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSG 477
A + ++G+ L + ++ P++ + SSG
Sbjct: 61 ALDGAQWMGRDLKVNKAKPREERGSSG 87
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 34 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 93
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 94 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 136
>gi|294460473|gb|ADE75814.1| unknown [Picea sitchensis]
Length = 485
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F+SN++ AT E + + FS G V + +L D TG+ +G AY++F E A
Sbjct: 296 DSRTVFVSNVHFAATKEAITKHFSRCGEVVKVIMLTDVATGQPKGSAYIEFSCRETAEIA 355
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ N+ F+ + L + R N + S R P
Sbjct: 356 LTLNETSFMSRMLKVVRKNASHVEPSIIARPP 387
>gi|167534895|ref|XP_001749122.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772275|gb|EDQ85928.1| predicted protein [Monosiga brevicollis MX1]
Length = 712
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 23 FQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSD---------LWLDYTQYLDKTLKV 73
+ + Y++ +S GD + + +YERAI + P+ D LW+ Y + + T K
Sbjct: 369 YDAWFDYIRLAESEGDVAKARDIYERAIANVPLDQDKRYWRRYIYLWVYYAVFEELTAKD 428
Query: 74 GNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDL 133
+ R VY + P + + L A++ EI +K+L A
Sbjct: 429 ADRTRAVYQACLQLLPHKTFTFAKVWLY-----AAQFEIR---QKNLKAARQ-------- 472
Query: 134 FLTRIDGL-RRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLE 192
L R GL + L+ G +E L+ +RE F R ++ ++ + + +A LE
Sbjct: 473 LLGRSLGLCPKDKLYKGYIELELE---LRE-FDRCRTLYNKYLEFNPATCQTWVQYAELE 528
Query: 193 QSMGKDMVSARGVWERLLKISGAMLEA----WQSYISMEIELDHINEARSIYKRCYSK 246
+G D AR ++E L I +L+ W++YI EIE D + AR +Y+R K
Sbjct: 529 AVLG-DYERARAIFE--LAIDQPLLDMPEILWKAYIDFEIEQDEVERARQLYERLLEK 583
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ +N + T E LR +FS G V+ ++I+ D TG+SRG ++ F ++ V K +
Sbjct: 189 FIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTF-ENASSVDEVVKTQ 247
Query: 455 QMFLGKKLSIARSNPKQRKDSSGE 478
+ GK + R+ P++ +D +G+
Sbjct: 248 HILDGKVIDPKRAIPREEQDKTGK 271
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG ++ + D V +NK
Sbjct: 273 FVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITY-DTPDAVDRVCQNK 331
Query: 455 QM-FLGKKLSIARSNPKQ 471
+ F GK++ I R+ P+Q
Sbjct: 332 FIEFKGKQIEIKRAEPRQ 349
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F+ I + DL FFS VG V +RI+ D T +S+G+ YV+F + E + A
Sbjct: 273 DQRTVFILQIAKETRPRDLEEFFSSVGHVRDVRIITDSKTRRSKGICYVEFWEIESVNLA 332
Query: 450 VAKNKQMFLGKKLSI 464
+A N Q LG L I
Sbjct: 333 LALNGQKLLGAPLVI 347
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
++ P +QPI + P D T F + + DL FFS VG V +R++ D+
Sbjct: 137 DKSPVRQPIDNLTPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRN 192
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AY++F++ + A+ Q LG + + + S E+ ++
Sbjct: 193 SRRSKGIAYIEFLEANSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRAAAMANN 244
Query: 489 QQTGNAG 495
Q GNAG
Sbjct: 245 LQKGNAG 251
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+ N+ +T EDL + FS G +S I DK T K +G A++ ++ EH A+A+ +
Sbjct: 406 FVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKALAELD 465
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESS 503
Q+F G+ + + S ++ K G+ E++ S++++ A A+ SS
Sbjct: 466 GQVFQGRMMHLLPSTIRKEKIEDGD---AEESSSYKKSKEAKDKANSASS 512
>gi|452842735|gb|EME44671.1| hypothetical protein DOTSEDRAFT_72205 [Dothistroma septosporum
NZE10]
Length = 238
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F VG ++ + IL DKFTG +G AYV+F + + + A
Sbjct: 89 DARSIFVGNVDYGASPEEIQAHFQSVGSINRVTILLDKFTGHPKGYAYVEFSEPQLVTQA 148
Query: 450 VAKNKQMFLGKKLSI 464
+ N+ +F + + +
Sbjct: 149 LVLNESVFRSRNIKV 163
>gi|443312655|ref|ZP_21042271.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442777374|gb|ELR87651.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 96
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT EDLR F++ G + I + D+ TG+ RG A+VD +D A+
Sbjct: 1 MTIYVGNLSYRATEEDLRTVFAEYGAIKRIVLPTDRETGRLRGFAFVDMNEDAQEDTAIT 60
Query: 452 K-NKQMFLGKKLSIARSNPKQ--RKDSSG 477
+ + ++G++L + ++ PK+ R++ G
Sbjct: 61 ELDGAEWMGRQLRVNKAKPKEDNRREGGG 89
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 363 ETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
++ Q E+ P + PI + P D T F + + DL FFS VG V +R
Sbjct: 129 KSPQKREKSPVRGPIDNLSPEER----DARTVFCMQLAARIRPRDLEEFFSTVGKVRDVR 184
Query: 423 ILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
++ D+ + +S+G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 185 MISDRNSRRSKGIAYVEFVDQSSVPLAIGLTGQKVLGVPIIVQASQAEKNRAAA 238
>gi|294882869|ref|XP_002769861.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239873674|gb|EER02579.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 364
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFS-DVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+CT + I+ K T +++ F S + G V ++++ D T +S+G+AYV+F + +
Sbjct: 153 DDCTVMVMGIHPKCTEKEVYVFMSQNAGKVRDVQVIRDPRTNRSKGVAYVEFYTPDSILK 212
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQ 486
A+A N Q +G + I S ++ + + R Q Q
Sbjct: 213 ALACNGQALMGHPIRIQASQAEKNRAAEAARVVQNQQQ 250
>gi|374372622|ref|ZP_09630284.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373235153|gb|EHP54944.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 90
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
F+SN+ T EDL FS G V S R++ DK T +SRG +V+ D+ A+ N
Sbjct: 4 FVSNLGYSFTSEDLSELFSSYGAVDSARVITDKITRQSRGFGFVEMPDENAAIKAIRDLN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGER 479
M G+ + ++ + PK+ K S R
Sbjct: 64 GTMQDGRSIKVSEARPKEEKPSYSNR 89
>gi|299470875|emb|CBN78824.1| Protein for assembly of pre-ribosomal particles containing 18S rRNA
[Ectocarpus siliculosus]
Length = 517
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T F+ N++ + +R+ F + G + S+R D+ TG+ RG +V+F D EH+ AA+
Sbjct: 377 TVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKL 436
Query: 453 NKQMFLGKKLSIARSNPKQRKDSS 476
+G+ + + + P+ +D S
Sbjct: 437 ANSDVMGRPIRVDYAAPRAPRDDS 460
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +FS G V ++I+ D TG+SRG ++ F D
Sbjct: 157 DICKMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTF-DSSSSVDE 215
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGE 478
V K + + GK + R+ P++ +D +G+
Sbjct: 216 VVKTQHILDGKVIDPKRAIPREEQDKTGK 244
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FF+ G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTY-DSPDAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNP----KQRKDSSGERAPTEQAQSHQQ 490
+ F GKK+ I R+ P KQ++ G AP A Q
Sbjct: 305 FIDFKGKKIEIKRAEPRHMQKQQQMGDGMSAPAGMANPMAQ 345
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDDEHLAAAV 450
+ ++ N++ AT EDL+ F+ G V +++ +D+ TG+ RG A+V+ +DE AA
Sbjct: 1 MSVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIE 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSGER 479
+ +G+ L + ++ P++ + S G R
Sbjct: 61 GLDGSELMGRILKVNKARPREERGSGGRR 89
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 36 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 95
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 96 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 138
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 146 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 204
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 205 KTQHILDGKVIDPKRAIPRDEQDKTGK 231
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 233 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 291
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 292 FIDFKDRKIEIKRAEPRHMQQKS 314
>gi|340383699|ref|XP_003390354.1| PREDICTED: RNA-binding protein 34-like [Amphimedon queenslandica]
Length = 305
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C+ F+ N+ E LR+ F G + IRI+ D TG ++G AYV F D + A
Sbjct: 158 CSVFVGNVPFGTDEEKLRKVFESCGPIDGIRIIKDTRTGINKGFAYVKFKDSSSVLFACK 217
Query: 452 KNKQMFL-GKKLSIARS 467
KN+++ + G+KL I R
Sbjct: 218 KNERIEVEGRKLRIFRC 234
>gi|170036993|ref|XP_001846345.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
gi|167879973|gb|EDS43356.1| polyadenylate-binding protein 2 [Culex quinquefasciatus]
Length = 218
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 364 TKQTVEEQPK-KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
TKQ P PI A K D + ++ N++ AT E+L F G ++ +
Sbjct: 67 TKQMTLGSPTGATPIMSA---EEKAEIDNRSIYVGNVDYGATAEELEAHFHGCGTINRVT 123
Query: 423 ILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
IL +K G +G AY++F E + A+A N+ +F G+++ + NPK+
Sbjct: 124 ILCNKADGHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKV---NPKR 169
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K PI+ AV T D T F + + DL FFS VG V +R++ D+ + +S
Sbjct: 20 EKSPIRRAVDNLTPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRSSRRS 79
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+G+AY++F++ + A+ Q LG + + S
Sbjct: 80 KGIAYIEFVEASSVPLAIGLTGQRLLGVPIIVQAS 114
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
KG ++ +++ T E LR F G + +I+++ D TG+S+G ++ F D E
Sbjct: 136 KGMMGPLRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAEC 195
Query: 446 LAAAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERA 480
A+ + N G+ + + +R DSSG A
Sbjct: 196 AKKALEQLNGFELAGRPMKVGHVT--ERSDSSGAPA 229
>gi|260950407|ref|XP_002619500.1| hypothetical protein CLUG_00659 [Clavispora lusitaniae ATCC 42720]
gi|238847072|gb|EEQ36536.1| hypothetical protein CLUG_00659 [Clavispora lusitaniae ATCC 42720]
Length = 1677
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 120/245 (48%), Gaps = 26/245 (10%)
Query: 46 YERAITDFPVSSDLWLDYTQYLDKTLKVGNV--VRDVYSRATKNCPWVGE-----LWVRS 98
+ER I P SS LW++Y + L++G + R++ RA K + E +W+ +
Sbjct: 1415 FERMIIGNPDSSVLWMNYMSF---QLQLGEIDKSREIAERALKTINYREEQEKMNIWI-A 1470
Query: 99 LLSLERSRASEEEISTVFEKSL--LCAFSTFEEYLDLF-----LTRIDGLRRRIL--FSG 149
+L+LE + SEE + F++++ + + + ++ + ++ + D L R + F+
Sbjct: 1471 ILNLENTFGSEESLDAAFKRAVQHMDSLTMHQKLIGIYQLSEKFDKADELYRVMTKKFAK 1530
Query: 150 EVEGVLDY--SLI-RETFQRASDYLSEQMKNT--DGLLRLYAYWAHLEQSMGKDMVSARG 204
V + + SL+ R+ F A + L+ +++ + + +A LE + G D R
Sbjct: 1531 NVNVWVSFGSSLMDRKLFDDAHELLARALQSLPKSSHIDVVRKFAQLEFAKG-DPEQGRS 1589
Query: 205 VWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFE 264
++E L+ + ++ W YI EI+ + S+++R +K+ + ++ WL +E
Sbjct: 1590 LFEGLVTDAPKRIDLWNVYIDQEIKQGDREKIVSLFERVVTKKLSRKQAKFFFSKWLGYE 1649
Query: 265 REYGT 269
E+G+
Sbjct: 1650 EEHGS 1654
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 118 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 177
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 178 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 220
>gi|426334252|ref|XP_004028672.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Gorilla
gorilla gorilla]
Length = 1500
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 1355 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 1414
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 1415 LKLNNSELMGRKLRVMRSVNKEK 1437
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ K+T++ + +F G V+ I IL DK TG +G YV+F++ E + A
Sbjct: 6 DGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFLNKESINNA 65
Query: 450 VAKNKQMFLGKKLSIA--RSN-PKQRKDSSGER 479
+A N +F +++ I R+N P ++ G R
Sbjct: 66 MALNDSIFNDRQIKITPKRTNLPYYMRNPGGTR 98
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P + PI + P D T F + + DL FFS VG V +R++ D+
Sbjct: 107 EKSPVRGPIDNLSPEER----DSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRN 162
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
+ +S+G+AYV+F+D + A+ Q LG + + S ++ + ++
Sbjct: 163 SRRSKGIAYVEFVDQSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 210
>gi|341882516|gb|EGT38451.1| hypothetical protein CAEBREN_23840 [Caenorhabditis brenneri]
Length = 84
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N + T E + +FFS+VG V+++RI++D+ TG+ RG A+V+F D+ AV +
Sbjct: 6 SVYVGNAPFQTTEEQIGQFFSNVGQVNNVRIVYDRETGRPRGFAFVEFADEAAAQRAVQE 65
Query: 453 -NKQMFLGKKLSIARSNPK 470
N F G++L + +N K
Sbjct: 66 LNGADFNGRQLRVNLANNK 84
>gi|401425835|ref|XP_003877402.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493647|emb|CBZ28937.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 216
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 349 KRQVQNLAEENEGRETKQTV---EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
KRQV +L E+ + + +++ E K A G+TK T + F+ +++L+ T
Sbjct: 33 KRQVDSLQEDMQLKALQESAAKDEGTRKTAAAAAASSGQTKTNT---SIFVGDLDLRTTD 89
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
DLR FF+ G ++ + +L D+ G +G AYV+F + AA+ K+ Q GK L +A
Sbjct: 90 ADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFETEGQAHAAILKDGQSLHGKPLKVA 148
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D C F+ +N + T + LR +F+ G V ++I+ D +G+SRG ++ F ++
Sbjct: 155 DNCKMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTF-EEPSSVDE 213
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSG 477
V K + + GK + RS P++ +D +G
Sbjct: 214 VVKTQHILDGKVIDPKRSIPREEQDKTG 241
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 244 FVGGIGADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTY-DSPEAVDRVCQNK 302
Query: 455 QM-FLGKKLSIARSNPK 470
+ F GK++ I R+ P+
Sbjct: 303 YIDFKGKQIEIKRAEPR 319
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T F ++ + DL FFS VG V +R++ D T +S+G+AYV+F D E + A+
Sbjct: 151 TVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLAMGL 210
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAG 495
N Q G + + + +R ++ + A T + S Q GN G
Sbjct: 211 NGQKLFGIPI-VVQPTQAERNRAAAQNAST--SNSTLQRGNVG 250
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 161 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 219
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSG 477
K + + GK + R+ P+ +D +G
Sbjct: 220 KTQHILDGKVIDPKRAIPRDEQDKTG 245
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 248 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 306
Query: 455 QM-FLGKKLSIARSNPK 470
+ F +K+ I R+ P+
Sbjct: 307 FIDFKDRKIEIKRAEPR 323
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 371 QPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG 430
Q KK + D P +G+ ++ N++ T EDLR+FFS +SS+R DK TG
Sbjct: 263 QAKK--VSDFAPKIVEGYN---RIYVGNLSWDITEEDLRKFFSGCK-ISSVRWGTDKETG 316
Query: 431 KSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPT 482
+ RG +V+F D+ L A+ ++Q+ G+ + I+ + P + APT
Sbjct: 317 EFRGYGHVEFSDNLSLLMALKLDQQIVCGRAIKISCAVPMKGAKVHATAAPT 368
>gi|298706878|emb|CBJ25842.1| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein
2) (Poly(A)-binding protein II) (PABII)
(Polyadenylate-binding nuclear protein 1) (Nuclear
poly(A)-binding protein 1) [Ectocarpus siliculosus]
Length = 265
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
DE + ++ ++ AT ++L+ F G ++ + IL DKF+G+ +G AY++F D + A
Sbjct: 121 DESSVYVGQVDYDATPDELQSHFEACGTINRVTILCDKFSGRPKGYAYIEFADKDGSENA 180
Query: 450 VAKNKQMFLGKKLSIA--RSN 468
+A + F G+ L + R+N
Sbjct: 181 LALDNSPFKGRNLKVTPKRTN 201
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E P ++P+ + P D T F + + DL FFS +G V +RI+ D+
Sbjct: 147 ERSPVREPVDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAIGKVHDVRIISDRN 202
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F D + + A+ Q LG + + S
Sbjct: 203 SRRSKGIAYVEFCDIQSVPLAIGLTGQRLLGVPIVVQAS 241
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
++ P +QPI + P D T F + + DL FFS VG V +R++ D+
Sbjct: 148 DKSPVRQPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRN 203
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F+D + A+ Q LG + + S
Sbjct: 204 SRRSKGIAYVEFVDSTSVPLAIGLTGQRVLGVPIIVQAS 242
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ T E++++ F+ G V+ + IL DKF G+ +G AYV+F++ E + A
Sbjct: 80 DSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAIQEA 138
Query: 450 VAKNKQMFLGKKLSIA--RSNPKQRKDSSGERA 480
V ++ G+++ +A R+N K G R
Sbjct: 139 VKLSESELHGRQIKVAPKRTNVPGLKQPRGGRG 171
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 168 DQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 227
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+ LG+++ + S
Sbjct: 228 IALSGQLLLGQQVMVKPS 245
>gi|451855129|gb|EMD68421.1| hypothetical protein COCSADRAFT_272630 [Cochliobolus sativus
ND90Pr]
gi|452004159|gb|EMD96615.1| hypothetical protein COCHEDRAFT_1018478 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 349 KRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYED 407
+R+VQ + EE + R+ +Q ++ + + +++ +K D + F+ N++ A+ E+
Sbjct: 32 RRRVQEMEEEAQKLRQMQQAIDNE--RHEMRE-----SKEDVDARSVFVGNVDYGASPEE 84
Query: 408 LRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
++ F +G ++ + IL DKFTG +G AYV+F + + A+ + F + L +
Sbjct: 85 IQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNEALVLDNSQFRNRNLKVV 142
>gi|449016079|dbj|BAM79481.1| similar to cleavage stimulation factor subunit 2 [Cyanidioschyzon
merolae strain 10D]
Length = 300
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
CT F+ NI T + L VG V S+RIL+DK TGK +G + ++ D E +AV
Sbjct: 6 CTVFIGNIPYGVTEDMLLERLQQVGPVVSLRILYDKETGKPKGYGFCEYRDPETAESAVR 65
Query: 452 K-NKQM-FLGKKLSIARSNPKQRKDSSG 477
N+++ F G+ L IA S+ + + S+G
Sbjct: 66 NLNERIEFGGRMLRIAPSSQTRNQASAG 93
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ T + N++LKA D+ FFS+V G V I+ + D+ +GKS+G+AYV+F E +
Sbjct: 153 DDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIK 212
Query: 449 AVAKNKQMFLGKKLSIARS 467
A++ N M + + + S
Sbjct: 213 ALSVNGYMLKNRPIKVQSS 231
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTLQKPKRSGGFP---KVFLGGLPSNVTETDLRSF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F G V + I++D+ KSRG ++ F D++ + V ++ GK++ I R+ P
Sbjct: 123 FQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSS--------GERAPTEQAQSHQQTGNAG 495
+DSS G+ P +Q GN G
Sbjct: 181 -RDSSSKVNDTHQGQWGPPQQGPPMGMAGNMG 211
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+FS G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPK 470
G+ + NP+
Sbjct: 76 HQLDGRTIDPKPCNPR 91
>gi|148679749|gb|EDL11696.1| poly(A)binding protein nuclear-like 1 [Mus musculus]
Length = 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ + +L +FS G + + IL DKF+G +G AY++F + A
Sbjct: 155 ADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKA 214
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
AV ++ F G+ + + SS +R + S + S +++ +
Sbjct: 215 AVGLDESTFRGRVIKVLPKRTNFPGISSTDRGGL-RTHSGSRAAFLHGSLHRKARLRAHG 273
Query: 509 QSRGRGDSVQ 518
+SRG G + Q
Sbjct: 274 RSRGHGGAPQ 283
>gi|428313300|ref|YP_007124277.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428254912|gb|AFZ20871.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 97
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT EDLR F+D G V + + D+ TG+ RG A+V+ ++ +A++
Sbjct: 1 MTIYVGNLSYQATEEDLRTVFADYGTVKRVVLPTDRETGRMRGFAFVEMTEETQEDSAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPKQRKDSS 476
+ + ++G++L + ++ PK+ SS
Sbjct: 61 ELDGAEWMGRQLRVNKARPKEDNRSS 86
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F + LKA+ D FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 180 DQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 239
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGT 496
+A + Q+ LG+ P K S E+ QS+ +G AG
Sbjct: 240 IALSGQLLLGQ--------PVMVKPSEAEK---NLVQSNATSGAAGV 275
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 15 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 74
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGN 493
G+AYV+F+D + A+ Q LG + + S ++ + ++ ++ Q G+
Sbjct: 75 GIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA--------MANNLQKGS 126
Query: 494 AG 495
AG
Sbjct: 127 AG 128
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 305 FIDFKDRKIEIKRAEPRHMQQKS 327
>gi|228471461|ref|ZP_04056246.1| 31 kDa ribonucleoprotein [Porphyromonas uenonis 60-3]
gi|228306729|gb|EEK15874.1| 31 kDa ribonucleoprotein [Porphyromonas uenonis 60-3]
Length = 86
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T +L N++ + DL + S+ G VS+ R++ D+ TG+SRG + D D++ A A
Sbjct: 1 MTLYLGNLSYRVRENDLEQLLSEFGEVSNARVVMDRATGRSRGFGFADMADEDARRAIEA 60
Query: 452 KNKQMFLGKKLSIARSNPKQRKD 474
++Q F G++L I + + R++
Sbjct: 61 LSEQEFEGRRLLIREAEDRPRRE 83
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 363 ETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
E + EE+ + P ++ P T+ D T F+ + + ++L FF VG V +
Sbjct: 148 EADKPREERRPRSPKREGTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQ 207
Query: 423 ILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
I+ D+ +G+S+G+ YV+F ++E + AA+ Q LG
Sbjct: 208 IVKDRVSGRSKGVGYVEFKNEESVPAAIQLTGQRLLG 244
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 305 FIDFKDRKIEIKRAEPRHMQQKS 327
>gi|150865289|ref|XP_001384440.2| Part of small ribosomal subunit (SSU) processosome (contains U3
snoRNA) [Scheffersomyces stipitis CBS 6054]
gi|149386545|gb|ABN66411.2| Part of small ribosomal subunit (SSU) processosome (contains U3
snoRNA) [Scheffersomyces stipitis CBS 6054]
Length = 1699
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 26/244 (10%)
Query: 46 YERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGE-----LWVRSLL 100
+ER + P SS LW++Y + L + R++ RA K + E +W+ +LL
Sbjct: 1441 FERLLVGNPNSSILWMNYMSF-QLQLSEADKAREIGERALKTINYRDEQEKLNIWI-ALL 1498
Query: 101 SLERSRASEEEISTVFEKS------------LLCAFSTFEEYL---DLFLTRIDGLRRRI 145
+LE + ++E + +F++S L+ +S E+Y +L+ + I
Sbjct: 1499 NLENTFGTDESLEEIFKRSTQYMDSLTMHQKLVSIYSMSEKYYQAEELYKVMTKKFGKSI 1558
Query: 146 -LFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARG 204
++ +LD L ET + + L K + + +A LE S G D R
Sbjct: 1559 SVWVQYGSFLLDRKLQEETHEVLAKALQTLPKRDH--IEVVRKFAQLEFSKG-DAEQGRS 1615
Query: 205 VWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFE 264
++E L+ + ++ W Y+ EI+ D+ ++ I++R +K+ + ++ WL FE
Sbjct: 1616 LFEGLVADAPKRIDLWNVYVDQEIKQDNKSKVEDIFERALAKKLSRKQAKFFFTKWLAFE 1675
Query: 265 REYG 268
E G
Sbjct: 1676 EEKG 1679
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 305 FIDFKDRKIEIKRAEPRHMQQKS 327
>gi|341898366|gb|EGT54301.1| hypothetical protein CAEBREN_10290 [Caenorhabditis brenneri]
Length = 223
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 51/96 (53%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E++ + F G V+ + IL DKF+G +G AYV+F + +
Sbjct: 90 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 149
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ A+A + G+++ + + + S+ R P
Sbjct: 150 MQNALAMTDSLLRGRQIKVDQKRTNRPGLSTTNRPP 185
>gi|158186708|ref|NP_001101074.2| programmed cell death protein 11 [Rattus norvegicus]
Length = 1876
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 45/274 (16%)
Query: 31 KYEQSSGDPGRVQLL---YERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKN 87
+ E++ DPGR ++R + P SS LWL Y + + ++ R V RA K
Sbjct: 1594 RIEEALMDPGRQPESADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKA-RAVAERALKT 1652
Query: 88 CPWVGE-----LWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRID--- 139
+ E +WV +LL+LE S+E ++ VFE+++ + E L +FL D
Sbjct: 1653 ISFREEQEKLNVWV-ALLNLENMYGSQESLAKVFERAV-----QYNEPLKVFLHLADIYT 1706
Query: 140 ---------GLRRRIL------------FSGEVEGVLDYSLIRETFQRASDYLSEQMKNT 178
L R+L + V G QRA + L + ++
Sbjct: 1707 KSEKFKEAGELYNRMLKRFRQEKAVWIKYGAFVLGRSQAGASHRVLQRALECLPTK-EHV 1765
Query: 179 DGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARS 238
D +++ +A LE +G D+ A+ ++E L + W YI M I+ E R
Sbjct: 1766 DVIVK----FAQLEFQLG-DVERAKAIFENTLTTYPKRTDVWSVYIDMTIKHGSQKEVRD 1820
Query: 239 IYKRCYSKRFTGTGSEDICHAWLRFEREYGTLED 272
I++R + +L +E+++GT +D
Sbjct: 1821 IFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKD 1854
>gi|169604234|ref|XP_001795538.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
gi|111066400|gb|EAT87520.1| hypothetical protein SNOG_05129 [Phaeosphaeria nodorum SN15]
Length = 214
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 349 KRQVQNLAEENEG-RETKQTVE-EQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYE 406
+R+VQ + EE RE +Q+++ E+ + + K+ V R+ F+ N++ A+ E
Sbjct: 32 RRRVQEMEEEAAKLREMQQSLDTERHEMRESKEDVDARS--------VFVGNVDYGASPE 83
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
+++ F +G ++ + IL DKFTG +G AYV+F + + A+ + +F + L +
Sbjct: 84 EIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPSLVNEALVLDNSVFRSRNLKVV 142
>gi|219670337|ref|YP_002460772.1| RNP-1 like RNA-binding protein [Desulfitobacterium hafniense DCB-2]
gi|219540597|gb|ACL22336.1| RNP-1 like RNA-binding protein [Desulfitobacterium hafniense DCB-2]
Length = 83
Score = 54.3 bits (129), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T ++ N+ T EDL FF G V S RI+ D+ TG+SRG +V+ D++ A
Sbjct: 3 TLYVGNLPWNTTSEDLNSFFGQYGQVISSRIITDRETGRSRGFGFVEVEDEDAARMAEDL 62
Query: 453 NKQMFLGKKLSIARSNPKQR 472
N + F G+ L++ + PKQ+
Sbjct: 63 NGKDFGGRPLTVNEARPKQQ 82
>gi|363731894|ref|XP_423974.3| PREDICTED: RNA-binding protein 34 [Gallus gallus]
Length = 405
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ FL N+ + +R F+D G V ++RI+ D+ +G +G YV F + + + A+
Sbjct: 266 SVFLGNLAYDISDSAVREHFADCGDVVAVRIVRDRQSGMGKGFGYVLFENTDAVHLALKL 325
Query: 453 NKQMFLGKKLSIARSNPK----QRKDSSGERAPTEQAQS 487
N +G+KL + R K QR ++ R P ++AQS
Sbjct: 326 NNSDLMGRKLRVKRCVEKGRAPQRNTTTRPRGPMDRAQS 364
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 305 FIDFKDRKIEIKRAEPRHMQQKS 327
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 305 FIDFKDRKIEIKRAEPRHMQQKS 327
>gi|328766510|gb|EGF76564.1| hypothetical protein BATDEDRAFT_36238 [Batrachochytrium
dendrobatidis JAM81]
Length = 417
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ N+ + E L FFSD G ++++R++ D+ T +G YV F + ++ A+ N
Sbjct: 283 FIGNLLFDISEEALWSFFSDCGDITNVRVIRDRNTNVGKGFGYVQFAERSSVSLALKLND 342
Query: 455 QMFLGKKLSIARSNP 469
G+++ I+RSNP
Sbjct: 343 TDLQGRQVRISRSNP 357
>gi|323450252|gb|EGB06134.1| hypothetical protein AURANDRAFT_65840 [Aureococcus anophagefferens]
Length = 1272
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 393 TAFLSNINLKATYEDLRRFFS--DVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV 450
AF+ + T E L+ FF+ DV G +R+L D TGKSRG+A+V E L A V
Sbjct: 714 VAFVGQLGFSVTAERLKAFFTSQDVPGTLKVRLLTDAKTGKSRGMAFVQCETAEALYACV 773
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQ 489
A + G+++++ RS R+ G+ A + ++HQ
Sbjct: 774 ALHHAQIDGRRINVERSAGGGREAKKGKLA---EHRAHQ 809
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDDEHLAAAV 450
T ++ NI+ T EDL F D G V + + D+ TGK RG +V+ DDE AA
Sbjct: 1 MTIYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIE 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSS 476
+ +LG+++ + ++ P++ K S
Sbjct: 61 ELDGAEWLGRQMRVNKAKPRENKGGS 86
>gi|332300371|ref|YP_004442292.1| RNP-1 like RNA-binding protein [Porphyromonas asaccharolytica DSM
20707]
gi|332177434|gb|AEE13124.1| RNP-1 like RNA-binding protein [Porphyromonas asaccharolytica DSM
20707]
Length = 86
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T +L N++ + DL + S+ G VS+ R++ D+ TG+SRG + D D++ A A
Sbjct: 1 MTLYLGNLSYRVRENDLEQLLSEFGEVSNARVVMDRATGRSRGFGFADMADEDARRAIEA 60
Query: 452 KNKQMFLGKKLSIARSNPKQRKD 474
++Q F G++L I + + R++
Sbjct: 61 LSEQEFEGRRLLIREAEDRPRRE 83
>gi|427718424|ref|YP_007066418.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427350860|gb|AFY33584.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
++ N++ + T EDL+R F++ G V+ +++ D+ TG+ RG A+V+ D AA+ A +
Sbjct: 4 YVGNLSYQVTEEDLKRAFAEYGTVNRVQLPTDRETGRPRGFAFVEMETDAQETAAIEALD 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSS 476
++G+ L + ++ P++ + S+
Sbjct: 64 GAEWMGRDLKVNKAKPREERGSA 86
>gi|392574568|gb|EIW67704.1| hypothetical protein TREMEDRAFT_69686 [Tremella mesenterica DSM
1558]
Length = 1138
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 59 LWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEK 118
+W + +L+ + V+D+ SR + CP VG +W L +E A+ E+++T FEK
Sbjct: 403 IWSQFAAWLEANGH-SDAVQDIKSRGARACPEVGSIWCSLLTHMECHGAALEDLTTTFEK 461
Query: 119 SLLCAF-----STFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSE 173
++ +D+FL R R +VEG DY + +T R + + +
Sbjct: 462 AINLGTLGRKGVPCTALVDVFLHRA-AFESRAEPVEDVEG--DYHPVIQTLSRGLEAVVK 518
Query: 174 QMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYI---SMEIEL 230
+ D LRL + +S ++ L K S + L ++Q I +E
Sbjct: 519 FSQAGDPSLRLEKFLLDWAESRAPKFLNE--TISLLSKPSKSRLSSYQMTILRSGIETRR 576
Query: 231 DHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLE 271
+I EAR+++ +R E + A+++FE +G L+
Sbjct: 577 GNIEEARNLFTTAL-QRSDLDWPEAVYEAFIQFENVHGDLD 616
>gi|119590411|gb|EAW70005.1| RNA binding motif protein 34, isoform CRA_a [Homo sapiens]
Length = 459
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 314 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 373
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 374 LKLNNSELMGRKLRVMRSVNKEK 396
>gi|414868203|tpg|DAA46760.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 306
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKP----KKVHDKEKRQVQN 354
+P + Q++ SV + ++R + S A + QK K+ ++K + Q+ N
Sbjct: 122 IPVNLPQEDISVARVAIKQRPQKNFHGMNSSSAHSSRDNLQKSVVERKEEYNKARAQIFN 181
Query: 355 LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ N T + EE D F+ N++ T E++++ F+
Sbjct: 182 NSNRNPNATTSENKEEM------------------DSRLVFVGNVDYACTPEEVQQHFNS 223
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSNPKQR 472
G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L +A R+N
Sbjct: 224 CGIVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVALKRTNIPGM 282
Query: 473 KDSSG 477
K G
Sbjct: 283 KQPRG 287
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 217
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 218 KTQHILDGKVIDPKRAIPRDEQDKTGK 244
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 246 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 304
Query: 455 QM-FLGKKLSIARSNPKQRKDSS 476
+ F +K+ I R+ P+ + S
Sbjct: 305 FIDFKDRKIEIKRAEPRHMQQKS 327
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 372 PKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK 431
P + +++ P ++ D T F++ + + T +LR FF G V +I+ D+ TG+
Sbjct: 197 PPQSRRRESSPHYSEEERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGR 256
Query: 432 SRGLAYVDFIDDEHLAAAVAKNKQMFLG----KKLSIARSNPKQRKDSSGERA 480
S+G+AYV+F ++ + A+ + + LG +L+ A N K R+ S RA
Sbjct: 257 SKGVAYVEFRREDSVQVALTLSGKRILGIPVIVQLTEAEKNRKARELSEQNRA 309
>gi|71013252|ref|XP_758567.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
gi|46098225|gb|EAK83458.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
Length = 588
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 388 FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLA 447
+E F+ +N T + LRR+FS G V + I+ D TG+SRG A+++F+D + +
Sbjct: 165 MPEEGKMFIGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFAFLNFVDPKAVN 224
Query: 448 AAVAKNKQMFLGKKLSIARSNPK 470
+ + + GK + R+ P+
Sbjct: 225 TVMVR-EHYLDGKVIDPKRAIPR 246
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ + T R FF G +S + D+ TGK RG ++ + DD L +
Sbjct: 281 FVGGLPPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRGFGFLTYADDSSLNHVLNTRP 340
Query: 455 QMFLGKKLSIARSNPK 470
+F GK++ + R+ K
Sbjct: 341 IVFDGKEVDVKRAQSK 356
>gi|398389564|ref|XP_003848243.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
gi|339468117|gb|EGP83219.1| hypothetical protein MYCGRDRAFT_77177 [Zymoseptoria tritici IPO323]
Length = 199
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + + A
Sbjct: 72 DARSVFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTPA 131
Query: 450 VAKNKQMFLGKKLSIA 465
+ N F G+ + +
Sbjct: 132 LVLNDSTFRGRAIKVV 147
>gi|328855457|gb|EGG04583.1| hypothetical protein MELLADRAFT_117005 [Melampsora larici-populina
98AG31]
Length = 667
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 376 PIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGL 435
PI D P AF+ N++ + + DL +FF V ++SIR+L D TGK +G
Sbjct: 85 PIPDKPP---------FNAFVGNLSWEVSNADLEQFFG-VTHITSIRMLTDSATGKPKGY 134
Query: 436 AYVDFIDDEHLAAAVAKNKQMFLGK--KLSIARSNPKQRKDSSG 477
Y++F E L A+ K+ + G+ ++S+A PK+R+D +G
Sbjct: 135 GYIEFSKREALVEALDKSGREVGGRVIRVSVAEP-PKEREDRTG 177
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 22/119 (18%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATYE 406
E+NE +TK+ EEQP +P AVP +T DE A FL NI + E
Sbjct: 311 EQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKEE 359
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
D R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 360 DFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 374 KQPIKDAV---PGRTKG-------FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
K P+K++ PGRT G D F+ N+ +T EDL + FS G +S +
Sbjct: 367 KGPLKNSAKPWPGRTLGENEEEEDLADSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHY 426
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAK-NKQMFLGKKLSIARSNPKQ 471
D T K +G A+V F+ EH A A+ + Q+F G+ L + S K+
Sbjct: 427 PIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKK 475
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 22/120 (18%)
Query: 356 AEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATY 405
E+NE +TK+ EEQP +P AVP +T DE A FL NI +
Sbjct: 310 TEQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKE 358
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
ED R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 359 EDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E++ + F G V+ + IL DKF+G +G AYV+F + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKGFAYVEFTEKDG 131
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ A+A + G+++ + + S+ R P
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTNRPGLSTTNRPP 167
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR F
Sbjct: 71 LQNGPHQLDGR----TIDPKPCN-PRTLQKPKRSGGFP---KVFLGGLPSNVTETDLRSF 122
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F G V + I++D+ KSRG ++ F D++ + V ++ GK++ I R+ P
Sbjct: 123 FQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAEP-- 180
Query: 472 RKDSS--------GERAPTEQAQSHQQTGNAG 495
+DSS G+ P +Q GN G
Sbjct: 181 -RDSSSKVNDTHQGQWGPPQQGPPMGMAGNMG 211
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ ++ + T E+L+R+FS G V ++ + +G+SRG +V F D ++ +
Sbjct: 16 FVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQNGP 75
Query: 455 QMFLGKKLSIARSNPK 470
G+ + NP+
Sbjct: 76 HQLDGRTIDPKPCNPR 91
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N+ + T ED+ +FS VG V+++RI++D+ TG+ RG A+V++ D+ AV +
Sbjct: 7 SVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRGFAFVEYTDESGAQRAVQE 66
Query: 453 -NKQMFLGKKLSIARSN 468
N F G+ L + +N
Sbjct: 67 LNGTSFNGRNLRVNFAN 83
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G ++ + IL +K+ G +G AY++F D + +
Sbjct: 95 VDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQT 154
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
A+A ++ +F G+ + + + S+ R P
Sbjct: 155 AMAMDESLFRGRPIKVMPKRTNRPGLSTTNRPP 187
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 22/120 (18%)
Query: 356 AEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATY 405
E+NE +TK+ EEQP +P AVP +T DE A FL NI +
Sbjct: 310 TEQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKE 358
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
ED R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 359 EDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|146101305|ref|XP_001469083.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|398023353|ref|XP_003864838.1| RNA binding protein, putative [Leishmania donovani]
gi|134073452|emb|CAM72182.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|322503074|emb|CBZ38158.1| RNA binding protein, putative [Leishmania donovani]
Length = 197
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 385 TKGFTDECTAFLSNINLKATYEDLRRFFSDVG--GVSSIRILHDKFTGKSRGLAYVDFID 442
++ + E + FL N+ T ED+ FF + G V +R++ D+ TG +G YV+F+
Sbjct: 5 SRAYPPETSIFLGNVAYNTTEEDVWSFFQEHGIADVKRVRLVRDRETGDCKGFGYVEFMH 64
Query: 443 DEHLAAAVAKNKQMFLGKKLSIARSNP-------------KQRKDSSGERAPTEQAQSHQ 489
+ A+ G++L I N K+R + +G R E+ + +
Sbjct: 65 ASSVQPAIETRGDKLNGRELRIVHVNKSKEVKVATKSRREKRRSEHAGGRVGAEERKRSR 124
Query: 490 QTGNAGTSASKESSIETSKQSRGRGDSVQLKGKNTFA---VPRNVRPL 534
G+A + K+ R D G T +P+++RPL
Sbjct: 125 SGGDADGGSRGSPDYSHVKKPRTESDLPSWAGLTTNPRRKMPKDLRPL 172
>gi|428218969|ref|YP_007103434.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
gi|427990751|gb|AFY71006.1| RNP-1 like RNA-binding protein [Pseudanabaena sp. PCC 7367]
Length = 88
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFID-DEHLAAAV 450
T ++ N++ +AT +D+ F+D G V ++++ D+ TG+ RG +VD D DE A
Sbjct: 1 MTIYIGNLSYQATQQDVEEIFNDYGSVKRVQLITDRETGRMRGFGFVDMSDEDEEDNAIE 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSGERA 480
N ++G+ L + ++ P R++ SG R+
Sbjct: 61 NLNGATWMGRALKVNKARP--RENRSGFRS 88
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 22/119 (18%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATYE 406
E+NE +TK+ EEQP +P AVP +T DE A FL NI + E
Sbjct: 311 EQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKEE 359
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
D R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 360 DFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 22/119 (18%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATYE 406
E+NE +TK+ EEQP +P AVP +T DE A FL NI + E
Sbjct: 311 EQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKEE 359
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
D R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 360 DFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 22/119 (18%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATYE 406
E+NE +TK+ EEQP +P AVP +T DE A FL NI + E
Sbjct: 311 EQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKEE 359
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
D R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 360 DFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQPKKQ-PIKDAVPGRTKGFTDECTAFLSNINLKA 403
D+ K++++ + +E RE + VE++ Q P A K D + F+ N++
Sbjct: 44 DEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPATLAANQAGKEEVDARSVFVGNVDYAC 103
Query: 404 TYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
T E++++ F G V + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 104 TPEEVQQHFQSCGTVHRVTILTDKF-GQPKGFAYVEFVEVEAIQEALQLNESELHGRQLK 162
Query: 464 I--ARSNPKQRKDSSGER 479
+ R+N K G R
Sbjct: 163 VLPKRTNVPGLKQHRGRR 180
>gi|427416011|ref|ZP_18906194.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425758724|gb|EKU99576.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT +D+R F + G V+ I + D+ TGK RG A+++ + DE A+A
Sbjct: 1 MTIYVGNLSFQATEDDIRDVFVEYGEVARITLPVDRETGKRRGFAFINMVKDEEEDLAIA 60
Query: 452 K-NKQMFLGKKLSIARSNPK 470
+ + +LG++L + ++ PK
Sbjct: 61 ELDGAEWLGRELRVNKAKPK 80
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
+D + ++ N++ AT ++L +F+ G V+ + I +++FTG +G AY++F D E +
Sbjct: 34 SDRRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEFSDRESVRT 93
Query: 449 AVAKNKQMFLGK--KLSIARSN 468
A+A ++ +F G+ K+S R+N
Sbjct: 94 AMALDETLFRGRVIKVSPKRTN 115
>gi|238859597|ref|NP_055829.2| RNA-binding protein 34 isoform 1 [Homo sapiens]
gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA-binding protein 34; AltName: Full=RNA-binding
motif protein 34
gi|119590412|gb|EAW70006.1| RNA binding motif protein 34, isoform CRA_b [Homo sapiens]
gi|306921633|dbj|BAJ17896.1| RNA binding motif protein 34 [synthetic construct]
Length = 430
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 285 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 345 LKLNNSELMGRKLRVMRSVNKEK 367
>gi|170090534|ref|XP_001876489.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647982|gb|EDR12225.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 444
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 12/101 (11%)
Query: 373 KKQPIKD----AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
KK+ +KD AVP K + + ++ N++ K T E+LR FF G ++ I +
Sbjct: 82 KKRKLKDGSAVAVPVSAK---RQNSVWVGNMSFKTTQENLRTFFDGCGEITRINMPTKAP 138
Query: 429 TG-----KSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
G ++RG AYVDF E AAA+A+++Q +G+KL I
Sbjct: 139 AGPGLIPENRGFAYVDFSTPEGKAAAIARSEQPLVGRKLLI 179
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 22/119 (18%)
Query: 357 EENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTA----------FLSNINLKATYE 406
E+NE +TK+ EEQP +P AVP +T DE A FL NI + E
Sbjct: 311 EQNESLDTKK--EEQP--EP---AVPQKT----DEELAIEKINQTGRLFLRNILYTSKEE 359
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH-LAAAVAKNKQMFLGKKLSI 464
D R+ FS G + + + D TG+S+G AYV F D ++ + A V +KQ+F G+ L I
Sbjct: 360 DFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDPKNAVNAYVELDKQIFQGRLLHI 418
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ T E+LR+FF+ ++S+R DK TG+ RG A+VDF D + L A+A ++
Sbjct: 264 YVGNLSWDITEEELRKFFNGCE-ITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQ 322
Query: 455 QMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNA-----GTSASKESSIETSKQ 509
+ G+ + I+ + P ++K + + A + + G K SS + K
Sbjct: 323 NVLFGRPVRISCAVPLKKKTGTHTSSTVNGANGDKPSSTGSDRIDGADGDKPSSTGSGKM 382
Query: 510 SRGRGDSVQLKGKNTFAVPR 529
R KG A P+
Sbjct: 383 RRRTCYECGEKGHTFAACPK 402
>gi|395728858|ref|XP_003775451.1| PREDICTED: AT-rich interactive domain-containing protein 4B [Pongo
abelii]
Length = 1815
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 1670 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 1729
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 1730 LKLNNSELMGRKLRVMRSVNKEK 1752
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 374 KQPIKDAVP---GRTKG-------FTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRI 423
K P+K++ GRT G D F+ N+ +T EDL+R FS G +S +
Sbjct: 377 KGPLKNSAKPWQGRTLGENEEEEDLADSGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHY 436
Query: 424 LHDKFTGKSRGLAYVDFIDDEHLAAAVAK-NKQMFLGKKLSIARSNPKQ 471
D T K +G A+V FI EH A A+ + Q+F G+ L + S K+
Sbjct: 437 PIDSLTKKPKGFAFVTFIFPEHAVRAYAEVDGQVFQGRMLHVLPSTIKK 485
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K PI+ + T D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 111 EKSPIRAPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRS 170
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+G+AY++F++ + A+ Q LG + + S
Sbjct: 171 KGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQAS 205
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
KG + ++ +++ T E LR F G + I+++ D TG+S+G ++ F D E
Sbjct: 221 KGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAEC 280
Query: 446 LAAAVAK-NKQMFLGKKLSIARSNPKQRKDSS 476
A+ + N G+ + + +R DSS
Sbjct: 281 AKKALEQLNGFELAGRPMKVGHVT--ERSDSS 310
>gi|20809545|gb|AAH29451.1| RNA binding motif protein 34 [Homo sapiens]
gi|312151154|gb|ADQ32089.1| RNA binding motif protein 34 [synthetic construct]
Length = 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 280 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 339
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 340 LKLNNSELMGRKLRVMRSVNKEK 362
>gi|357457685|ref|XP_003599123.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
gi|355488171|gb|AES69374.1| Polyadenylate-binding protein 2-A [Medicago truncatula]
Length = 685
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 380 AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVD 439
+V GR D T F+SN++ AT + L R F+ G V + I+ D TG+ +G AYV+
Sbjct: 499 SVAGRPTEDVDSRTIFVSNVHFAATKDALSRHFNKFGEVLKVIIVTDAATGQPKGAAYVE 558
Query: 440 FIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPT 482
F+ E A++ + F+ + L + + K + E APT
Sbjct: 559 FMLKEAADNALSLDGTSFMSRILKVVK---KSAAPAQQESAPT 598
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 378 KDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAY 437
+D P T+ D+ T F+ + + ++L FF VG V +I+ D+ +G+S+G+ Y
Sbjct: 164 RDGTPPLTEDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGY 223
Query: 438 VDFIDDEHLAAAVAKNKQMFLG 459
V+F ++E +AAA+ Q LG
Sbjct: 224 VEFKNEESVAAAIQLTGQKLLG 245
>gi|158258156|dbj|BAF85051.1| unnamed protein product [Homo sapiens]
Length = 425
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 280 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 339
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 340 LKLNNSELMGRKLRVMRSVNKEK 362
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGG-VSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ T + N++LKA D+ FFS+V G V I+ + D+ +GKS+G+AYV+F + +
Sbjct: 316 DDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVIK 375
Query: 449 AVAKNKQMFLGKKLSIARS 467
A++ N M + + + S
Sbjct: 376 ALSVNGYMLKNRPIKVQSS 394
>gi|157109621|ref|XP_001650752.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|94469160|gb|ABF18429.1| splicing factor RNPS1 [Aedes aegypti]
gi|108868426|gb|EAT32651.1| AAEL015143-PA [Aedes aegypti]
Length = 220
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G ++ + IL +K G +G AY++F E + A
Sbjct: 91 DNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETA 150
Query: 450 VAKNKQMFLGKKLSIARSNPKQ 471
+A N+ +F G+++ + NPK+
Sbjct: 151 LAMNETLFRGRQIKV---NPKR 169
>gi|157109619|ref|XP_001650751.1| glycine rich RNA binding protein, putative [Aedes aegypti]
gi|108868425|gb|EAT32650.1| AAEL015143-PB [Aedes aegypti]
Length = 222
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ AT E+L F G ++ + IL +K G +G AY++F E + A
Sbjct: 91 DNRSIYVGNVDYGATAEELEAHFHGCGTINRVTILCNKADGHPKGFAYIEFGSKEFVETA 150
Query: 450 VAKNKQMFLGKKLSIARSNPKQ 471
+A N+ +F G+++ + NPK+
Sbjct: 151 LAMNETLFRGRQIKV---NPKR 169
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ T E+LR+FF++ ++S+R DK TG+ RG A+VDF D + L A+A ++
Sbjct: 247 YVGNLSWDITEEELRKFFNN-SEITSLRFGMDKETGEFRGYAHVDFGDSQSLKKALALDQ 305
Query: 455 QMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNA-----GTSASKESSIETSKQ 509
+ G+ + I+ + P ++K + + +A + + G K SS + K
Sbjct: 306 NVLFGRPVRISCAVPLKKKTGTHASSTVNEANGDKSSSTGSDKINGADGDKSSSTGSGKM 365
Query: 510 SR 511
R
Sbjct: 366 RR 367
>gi|302696625|ref|XP_003037991.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
gi|300111688|gb|EFJ03089.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
Length = 449
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 18/113 (15%)
Query: 391 ECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGK------SRGLAYVDFIDDE 444
+ + ++ N++ K T +DLR FF + G V+ I + K +G+ ++G AYVDF E
Sbjct: 99 QNSVWVGNMSFKTTQDDLRSFFKEAGEVTRIN-MPTKPSGRPGGSIENKGYAYVDFATPE 157
Query: 445 HLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQ------AQSHQQT 491
AAA+A ++ +G+KL I K D +G AP Q A++H +T
Sbjct: 158 AKAAAIALSEHPLIGRKLLI-----KDGDDFAGRPAPPGQDPTQLTAKTHSKT 205
>gi|186682695|ref|YP_001865891.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186465147|gb|ACC80948.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 104
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV- 450
+ ++ N++ + T EDL++ F++ G VS +++ D+ TG+ RG A+V+ D AA+
Sbjct: 1 MSIYVGNLSYQVTEEDLKQAFAEYGTVSRVQLPTDRETGRPRGFAFVEMESDTQEQAAID 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSS 476
A + ++G+ L + ++ P++ + SS
Sbjct: 61 ALDGAEWMGRDLKVNKAKPREDRSSS 86
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 337 APQKPKKVHDKEKRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDEC--- 392
A P K + K++++ + EE RE + VE+ ++DA T+ +E
Sbjct: 36 ASNHPNKDLEDMKKRLKEIEEEASALREMQAKVEKD--MGAVQDAGSSATQAEKEEVDGR 93
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N++ T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + AV
Sbjct: 94 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQNAVML 152
Query: 453 NKQMFLGKKLSIA--RSNPKQRKDSSGER 479
N+ G++L ++ R+N K G R
Sbjct: 153 NESELHGRQLKVSAKRTNVPGMKQYFGRR 181
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 162 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 220
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 221 KTQHILDGKVIDPKRAIPRDEQDKTGK 247
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I ++ FFS G + +++ DK TG+SRG +V + D V +NK
Sbjct: 249 FVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTY-DSADAVDRVCQNK 307
Query: 455 QM-FLGKKLSIARSNPK---QRKDSSGERAPTEQAQSHQQTGNAGT 496
+ F +K+ I R+ P+ Q+ ++G +++ GN G
Sbjct: 308 FIDFKDRKIEIKRAEPRHMQQKSSNNGGTNTGSNGNMNRRGGNFGN 353
>gi|440463731|gb|ELQ33285.1| nucleic acid-binding protein [Magnaporthe oryzae Y34]
gi|440483679|gb|ELQ64028.1| nucleic acid-binding protein [Magnaporthe oryzae P131]
Length = 472
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 126/318 (39%), Gaps = 28/318 (8%)
Query: 168 SDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISME 227
S + + + K D L+ AY L +MG+ V R R K + A L + ++
Sbjct: 140 SKWSNRRGKRDDVLVASRAYLQTLPMAMGQHSVLKR----RKEKETPASLPG-REFMPAA 194
Query: 228 IELDH-INEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEE 286
++D IN A C+ + S + +R L S+ + T
Sbjct: 195 GKIDTWINPAPGYKMHCFRRAAMRAVSAQTARTAIVSKRVVPVLAAVPASIARST----A 250
Query: 287 LRLFRSQQESKSLPESADQKEHSVKKTG-------REKRKSDSNISYEQSPAKRQKHAPQ 339
L + R+ S++L + S+ + G R +R D+N++ + A Q
Sbjct: 251 LPIARAFSVSRTLANVEENSGSSLPRQGEITSCPYRTRRHGDANLTLNDT-LMSHVRATQ 309
Query: 340 KPKKVHDKEKRQVQNLAEE-NEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDE-----CT 393
++ + Q EE N + + P+ IK + PG E +
Sbjct: 310 WFGFIYFETPEAAQKACEEANNTFWHGRRINVAPR---IKASKPGNRDAMNQEERTPTSS 366
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
++ NI ++T L F D+ G+ +RI D+ TG RG A+ DF D E AV K
Sbjct: 367 LYIGNIPYESTDAALNNLFQDLEGLKDVRIAVDRSTGWPRGFAHADFKDVESATKAVEKV 426
Query: 454 KQM-FLGKKLSIARSNPK 470
K M +G+ L + S P+
Sbjct: 427 KLMELMGRTLRVDYSTPR 444
>gi|349804535|gb|AEQ17740.1| putative rna-binding region containing protein 2 isoform b isoform
15 [Hymenochirus curtipes]
Length = 258
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F + + DL FFS VG V +R++ D+ + +S+G+AYV+F+D +A A
Sbjct: 9 DSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVALA 68
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSS 476
+ Q LG + + S ++ + ++
Sbjct: 69 IGLTGQRVLGVPIVVQASQAEKNRAAA 95
>gi|440804786|gb|ELR25655.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 610
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGV----SSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TAF+ N+N K +L FF + G ++R+ D+ T + RG+AYVDF D E L
Sbjct: 211 TAFVGNLNFKVEAPELEEFFINAGCNLPREGAVRMTRDRETDRPRGIAYVDFEDAESLRK 270
Query: 449 AVAKNKQMFLGKKLSI 464
A+ + + F G+ + +
Sbjct: 271 AIELDGEEFAGRAIRL 286
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D+ + ++ N++ +T E+L F G V+ + IL DKF+G +G AY++F + + A
Sbjct: 43 VDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKGYAYIEFEEKSSVKA 102
Query: 449 AVAKNKQMFLGKKLSI 464
AV ++ +F G+ + +
Sbjct: 103 AVELDESVFRGRVIKV 118
>gi|341904125|gb|EGT59958.1| hypothetical protein CAEBREN_16301 [Caenorhabditis brenneri]
Length = 336
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E++ + F G V+ + IL DKF+ +G AYV+F + +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSRHPKGFAYVEFTEKDG 131
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIE 505
+ A+A + G+++ + + + S+ R P G GT+ K +++
Sbjct: 132 MQNALAMTDSLLRGRQIKVDQKRANRPGLSTTNRPPFR--------GRGGTNNRKSTTLN 183
Query: 506 TSKQSRGRGDSV 517
+ ++G +
Sbjct: 184 EMRAAQGEAPPI 195
>gi|452984683|gb|EME84440.1| hypothetical protein MYCFIDRAFT_122613, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 185
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+ N++ A+ E+++ F G ++ + IL DKFTG +G AYV+F + + A
Sbjct: 67 DSRSIFVGNVDYGASPEEIQAHFQSCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQA 126
Query: 450 VAKNKQMFLGKKLSIA 465
+ N+ +F G+ + +
Sbjct: 127 LVLNESVFRGRNIKVV 142
>gi|45187874|ref|NP_984097.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|27475785|gb|AAO16965.1|AF384990_2 Yib1 [Eremothecium gossypii]
gi|44982658|gb|AAS51921.1| ADR001Cp [Ashbya gossypii ATCC 10895]
gi|374107313|gb|AEY96221.1| FADR001Cp [Ashbya gossypii FDAG1]
Length = 324
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + F+S+I +AT E L F DVG +S I IL++K TG+ +G AY+ F + A
Sbjct: 81 DSRSVFVSSITPEATAEMLEEHFKDVGVISRITILYNKKTGEPKGYAYIQFESISSVEKA 140
Query: 450 VAKNKQMFLGKKLSIAR 466
+ + F G +S+A+
Sbjct: 141 LQLDGSSFNGNTISVAK 157
>gi|414868204|tpg|DAA46761.1| TPA: hypothetical protein ZEAMMB73_590191 [Zea mays]
Length = 261
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 299 LPESADQKEHSVKKTGREKRKSDSNISYEQSPAKRQKHAPQKP----KKVHDKEKRQVQN 354
+P + Q++ SV + ++R + S A + QK K+ ++K + Q+ N
Sbjct: 77 IPVNLPQEDISVARVAIKQRPQKNFHGMNSSSAHSSRDNLQKSVVERKEEYNKARAQIFN 136
Query: 355 LAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSD 414
+ N T + EE D F+ N++ T E++++ F+
Sbjct: 137 NSNRNPNATTSENKEE------------------MDSRLVFVGNVDYACTPEEVQQHFNS 178
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA--RSNPKQR 472
G V+ + IL DKF G+ +G AYV+F++ E + A+ N+ G++L +A R+N
Sbjct: 179 CGIVNRVTILTDKF-GQPKGFAYVEFVEVEAVQEAIKLNESELHGRQLKVALKRTNIPGM 237
Query: 473 KDSSG 477
K G
Sbjct: 238 KQPRG 242
>gi|357129961|ref|XP_003566627.1| PREDICTED: uncharacterized protein LOC100837982 [Brachypodium
distachyon]
Length = 620
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N+ T DLR+FFSD +SSIR DK TG +G A+VDF D LA A+ ++
Sbjct: 295 YVGNLAWDITEVDLRKFFSDCK-ISSIRFGTDKETGDFKGFAHVDFSDGTSLAVAMKLDQ 353
Query: 455 QMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQT 491
+ G+ + I + P++ + A ++ +++ +T
Sbjct: 354 NVIKGRPVRIRCAVPRKESQKPNDNANSDSSKNKIRT 390
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ + T D T F + + DL FFS VG V +R++ D+ + +S+
Sbjct: 135 KSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSK 194
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
G+AY++F+D + A+ Q LG + + S ++ + ++
Sbjct: 195 GIAYMEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAA 237
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
++ N++ + T + LR FS G V+S +I+ D+ +G S+G +++ DE AAA+ N
Sbjct: 6 YVGNLSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAITGTN 65
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
F G++L + + K R+D
Sbjct: 66 GHEFEGRQLRVNEAMDKPRRD 86
>gi|388498186|gb|AFK37159.1| unknown [Lotus japonicus]
Length = 217
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 337 APQKPKKVHDKEKRQVQNLAEENEG-RETKQTVEEQPKKQPIKDAVPGRTKGFTDEC--- 392
A P K + K++++ + EE RE + VE+ ++DA T+ +E
Sbjct: 36 ASNHPNKDLEDMKKRLKEIEEEASALREMQAKVEKD--MGAVQDAGSSATQAEKEEVDGR 93
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N++ T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + AV
Sbjct: 94 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQNAVML 152
Query: 453 NKQMFLGKKLSIA--RSNPKQRKDSSGER 479
N+ G++L ++ R+N K G R
Sbjct: 153 NELELHGRQLKVSAKRTNVPGMKQYFGRR 181
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ AT E+L + F G ++ + IL +K+ G +G AY++F D + +
Sbjct: 95 VDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDRDSVQT 154
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
A+A ++ +F G+ + + + S+ R P
Sbjct: 155 AMAMDESLFRGRPIKVMPKRTNRPGLSTTNRPP 187
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 362 RETKQTVEEQPKKQPIKDAVPGRTKG-------FTDECTAFLSNINLKATYEDLRRFFSD 414
RE + V + P K K A GRT G D F+ N+ +T EDL + FS
Sbjct: 366 REKQAPVAKAPPKNSSK-AWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSA 424
Query: 415 VGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-NKQMFLGKKLSIARSNPKQRK 473
G +S + D T K +G A+V F+ EH A A+ + Q+F G+ L + P K
Sbjct: 425 YGPLSELHYPIDTLTKKPKGFAFVTFLFPEHAVKAYAEVDGQVFQGRMLHVL---PSTIK 481
Query: 474 DSSGERA 480
+GE A
Sbjct: 482 KEAGEEA 488
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N+ T + LR F G VSS +++ D+ +G+S+G A+VD +DE AA+ K N
Sbjct: 4 YVGNLPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKLN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDS 475
G+ + + ++ P+ +DS
Sbjct: 64 GHELDGRTIVVNKAKPRAPRDS 85
>gi|449301196|gb|EMC97207.1| hypothetical protein BAUCODRAFT_68306 [Baudoinia compniacensis UAMH
10762]
Length = 223
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 349 KRQVQNL-AEENEGRETKQTVEEQPKK-QPIKDAVPGRTKGFTDECTAFLSNINLKATYE 406
K++VQ + AE + RE + +++ Q + + K+ + GR+ F+ N++ A+ E
Sbjct: 36 KKRVQEMEAEAAKLREMQASIDAQTEGLRESKEDIDGRS--------VFVGNVDYGASPE 87
Query: 407 DLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA- 465
+++ F G ++ + IL DKFTG +G AYV+F + + A+ N F G+ + +
Sbjct: 88 EIQAHFQTCGSINRVTILLDKFTGHPKGYAYVEFSEPNLVTQALVLNDSQFRGRAIKVVP 147
Query: 466 -RSN 468
R+N
Sbjct: 148 KRTN 151
>gi|344237967|gb|EGV94070.1| Embryonic polyadenylate-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 348 EKRQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPG--RTKGFTDECTAFLSNINLKATY 405
E+ VQ A E +G E Q + + + PG + K D + ++ N++ +
Sbjct: 102 EQPYVQRKATEEKGAEVGQLLS----PEIMGCFFPGTPKEKVEADHRSVYVGNVDYGGSA 157
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
+LR +FS G + + IL DKF+G +G AY++F + AAV ++ F G+ +
Sbjct: 158 AELRAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASQNSVQAAVELDESTFRGRVI 214
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T F+ N++ KA+ EDLR FS+ G V I++ D+ TG+ RG A+V+ ++ A+
Sbjct: 1 MTIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAID 60
Query: 452 K-NKQMFLGKKLSIARSNPKQRKDSSGER 479
+ + ++G+ L + ++ P+Q G R
Sbjct: 61 ELDGATWMGRDLRVNKAMPRQAGAGGGRR 89
>gi|332812270|ref|XP_514284.3| PREDICTED: RNA-binding protein 34 isoform 2 [Pan troglodytes]
gi|410225796|gb|JAA10117.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410267564|gb|JAA21748.1| RNA binding motif protein 34 [Pan troglodytes]
gi|410289770|gb|JAA23485.1| RNA binding motif protein 34 [Pan troglodytes]
Length = 430
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 345 LKLNNSELMGRKLRVMRSVNKEK 367
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D + ++ N++ + E+L+ F G + I I+ DK++G +G AY++F D+ + A
Sbjct: 114 DRRSIYVGNVDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNA 173
Query: 450 VAKNKQMFLGKKLSI 464
+ N MF G++L +
Sbjct: 174 LLLNDTMFRGRQLKV 188
>gi|125532099|gb|EAY78664.1| hypothetical protein OsI_33765 [Oryza sativa Indica Group]
Length = 549
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 191 DQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 250
Query: 450 VAKNKQMFLGKKLSIARS 467
+A Q+ LG+++ + S
Sbjct: 251 IALTGQVLLGQQVMVKPS 268
>gi|166157542|ref|NP_001107251.1| embryonic polyadenylate-binding protein 2 [Rattus norvegicus]
gi|205716473|sp|B0BNE4.1|EPAB2_RAT RecName: Full=Embryonic polyadenylate-binding protein 2;
Short=Embryonic poly(A)-binding protein 2;
Short=ePABP-2; Short=ePABP2; AltName: Full=Embryonic
poly(A)-binding protein type II; AltName:
Full=Poly(A)-binding protein nuclear-like 1
gi|165970991|gb|AAI58790.1| Pabpnl1 protein [Rattus norvegicus]
Length = 269
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ + +L +FS G + + IL DKF+G +G AY++F + A
Sbjct: 136 ADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQA 195
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
AV ++ F G+ + + SS +R S + G S ++ +
Sbjct: 196 AVRLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSSSRAAFLQG-SLQRKPRLRPHG 254
Query: 509 QSRGRG 514
QSRGRG
Sbjct: 255 QSRGRG 260
>gi|397508184|ref|XP_003824546.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Pan
paniscus]
Length = 459
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 314 DKRSVFVGNLPYKVEESAVEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 373
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 374 LKLNNSELMGRKLRVMRSVNKEK 396
>gi|222624209|gb|EEE58341.1| hypothetical protein OsJ_09449 [Oryza sativa Japonica Group]
Length = 565
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 188 DQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 247
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+ LG+++ + S
Sbjct: 248 IALSGQLLLGQQVMVKPS 265
>gi|218192112|gb|EEC74539.1| hypothetical protein OsI_10059 [Oryza sativa Indica Group]
Length = 567
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 190 DQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 249
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+ LG+++ + S
Sbjct: 250 IALSGQLLLGQQVMVKPS 267
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 147 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 202
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 203 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 254
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 255 LQKGNGG 261
>gi|357017693|gb|AET50875.1| hypothetical protein [Eimeria tenella]
Length = 415
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 380 AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVD 439
A P + G TD T ++SN+ L+ +LRR F +VG V RI+++ + +SRG A++
Sbjct: 96 ARPRQRGGDTD--TLYISNLPLRCGALELRRIFEEVGEVKDCRIVNNPVSRESRGFAFLS 153
Query: 440 FIDDEHLAAAVAK--NKQMF 457
F+D H A A+ NK +F
Sbjct: 154 FVDPSHAAVAIEHFDNKTIF 173
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|157872658|ref|XP_001684864.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68127934|emb|CAJ06567.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 216
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 349 KRQVQNLAEENEGRETKQTV---EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATY 405
KRQV +L E+ + + +++ E K A G++K T + F+ +++L+ T
Sbjct: 33 KRQVDSLQEDMQLKALQESAAKDEGTRKTAAAAAATSGQSKTNT---SIFVGDLDLRTTD 89
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIA 465
DLR FF+ G ++ + +L D+ G +G AYV+F + AA+ K+ Q GK L +A
Sbjct: 90 ADLRVFFASCGAITRVTVLKDR-QGNPKGTAYVEFETEGQAHAAILKDGQSLHGKPLKVA 148
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ T E++++ F G V+ + IL DKF G+ +G AYV+F++ E +
Sbjct: 44 VDGRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEAEAVQN 102
Query: 449 AVAKNKQMFLGKKLSIA--RSNPKQRKDSSGER 479
AV N+ G++L ++ R+N K G R
Sbjct: 103 AVMLNESELHGRQLKVSAKRTNVPGMKQYFGRR 135
>gi|198436643|ref|XP_002128347.1| PREDICTED: similar to homology with RNA-binding proteins in
meristematic tissue [Ciona intestinalis]
Length = 202
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 388 FTDECT--AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
F D+ + F+ +I+ KAT +D+ FS +G + I +L DK T KSRG ++ F D
Sbjct: 3 FADDISHKIFVGSIDFKATEKDVEEAFSHIGEIEHIVLLKDKETQKSRGFGFITFKDKNS 62
Query: 446 LAAAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKE 501
+ A++ N ++ +G+ + + + K SG AP + QQ G S ++
Sbjct: 63 VELAISSMNHKIIMGRPIVVNYAEKK-----SGNSAPMQDKFGGQQQNAGGYSGYQQ 114
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens]
gi|119586632|gb|EAW66228.1| RNA binding motif protein 23, isoform CRA_g [Homo sapiens]
Length = 319
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S+
Sbjct: 148 KSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSK 207
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGN 493
G+AYV+F + + + A+ Q LG + + + S E+ ++ Q GN
Sbjct: 208 GIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANNLQKGN 259
Query: 494 AG 495
G
Sbjct: 260 GG 261
>gi|339248325|ref|XP_003375796.1| RNA-binding protein squid [Trichinella spiralis]
gi|316970795|gb|EFV54670.1| RNA-binding protein squid [Trichinella spiralis]
Length = 329
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 375 QPIKDAV--PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
QP D V P + + +E F+ I+ DL F+ G V +++ +D +TG+S
Sbjct: 39 QPSNDGVSAPAKKREKNEERKIFVGGISWDTNENDLTNHFNQFGDVVHVQVKYDHYTGRS 98
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRK 473
RG A+V+F E A+AK GKK + + ++ K
Sbjct: 99 RGFAFVEFATAEACKKALAKKDAELKGKKCEVKPAKSRENK 139
>gi|149038404|gb|EDL92764.1| similar to embryonic pol(yA) binding protein 2 (predicted) [Rattus
norvegicus]
Length = 284
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ + +L +FS G + + IL DKF+G +G AY++F + A
Sbjct: 151 ADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQA 210
Query: 449 AVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSK 508
AV ++ F G+ + + SS +R S + G S ++ +
Sbjct: 211 AVRLDESTFRGRVIKVLPKRTNFPGISSTDRGGLRTHSSSRAAFLQG-SLQRKPRLRPHG 269
Query: 509 QSRGRG 514
QSRGRG
Sbjct: 270 QSRGRG 275
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F+ + + +DL FF G V +I+ D+ +G+S+G+ YV+F ++E +AAA
Sbjct: 171 DRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESVAAA 230
Query: 450 VAKNKQMFLG----KKLSIARSNPKQRKDSSGERAPTEQAQSHQQT 491
+ QM LG +L+ A N + R TE H T
Sbjct: 231 IRLTGQMLLGIPIIAQLTEAEKNRQARN--------TESTSGHHHT 268
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N++ T EDL F G + +++ D+ TG+S+G A+V F + E A+ K N
Sbjct: 275 YVGNVHFSITEEDLTNVFEPFGELEFVQLQKDE-TGRSKGYAFVQFANPEQARDALEKMN 333
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
G+ + + N K D+ R S Q G+S S + GR
Sbjct: 334 GFELAGRAIRVGLGNDKFTPDTHANRP---SGASTNQPNFQGSSFSGQG---------GR 381
Query: 514 GDSVQLKGKNTF 525
G VQ G N+F
Sbjct: 382 G--VQAGGSNSF 391
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQPKKQ-PIKDAVPGRTKGFTDECTAFLSNINLKA 403
D+ K++++ + +E RE + VE++ Q P A K D + F+ N++
Sbjct: 44 DEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYAC 103
Query: 404 TYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
T E++++ F G V + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 104 TPEEVQQHFQTCGTVHRVTILTDKF-GQPKGFAYVEFVEVEAVQEALQLNESELHGRQLK 162
Query: 464 I--ARSNPKQRKDSSGER 479
+ R+N K G R
Sbjct: 163 VLQKRTNVPGLKQFRGRR 180
>gi|403264879|ref|XP_003924694.1| PREDICTED: probable RNA-binding protein 23 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P T C + I + DL FFS VG V +RI+ D+
Sbjct: 146 EKSPVREPIDNLSPEERDARTVFCMQLAARIRPR----DLEDFFSAVGKVRDVRIISDRN 201
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F + + + A+ Q LG + + S
Sbjct: 202 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQAS 240
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 380 AVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVD 439
A P T+ D T F+ + + +L+ FF VG V+ +I+ D+ +G+S+G+ YV+
Sbjct: 158 ATPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVE 217
Query: 440 FIDDEHLAAAVAKNKQMFLGKKLSI----ARSNPKQRKDSSGERAPTEQAQSHQQTGNAG 495
F D++ +A A+ Q LG + + A N + R +G P GN
Sbjct: 218 FKDEDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVPFHRLYVGNIH 277
Query: 496 TSASKE 501
+ ++E
Sbjct: 278 FNVTEE 283
>gi|357618884|gb|EHJ71687.1| hypothetical protein KGM_12879 [Danaus plexippus]
Length = 728
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Query: 387 GFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHL 446
G + NI+ KAT E LR F+ G V +++L K GK G A+V F
Sbjct: 17 GVNRNARLIIRNISFKATEESLREHFAKYGTVEEVKLLK-KADGKLVGCAFVHFTHVPMA 75
Query: 447 AAAVAK-NKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIE 505
A+A NK+ FLG+ + ++ + PK + + +PT++ Q+ + + E + +
Sbjct: 76 NKAIAATNKKPFLGRPIYVSWAVPKHQYNGEQNGSPTKKRQTSGSSDDVKVEVKDEDTAD 135
Query: 506 TSKQSRGRGDSVQLKGKNTFAVPRNVR 532
K S + KN V RN R
Sbjct: 136 NQKPS---------EDKNKMRVNRNAR 153
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE 444
D CT F++NI + L+ F + G V I DK T S+G +V F + E
Sbjct: 348 DGCTVFITNIPFMVADDQLKTFAENTGPVKYALICVDKLTEHSKGSGFVKFANKE 402
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA-VAKN 453
FL NI +T +D R+ FS G + + I D TGKS+G AYV F + + A A +A +
Sbjct: 316 FLRNILYSSTEQDFRQLFSPYGELEEVHIALDTRTGKSKGFAYVLFKNSKDAAEAYIALD 375
Query: 454 KQMFLGKKLSIARSNPKQ 471
KQ+F G+ L I ++ K+
Sbjct: 376 KQIFQGRLLHILPADAKK 393
>gi|429847560|gb|ELA23152.1| pre-mRNA splicing factor [Colletotrichum gloeosporioides Nara gc5]
Length = 1092
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 27/197 (13%)
Query: 31 KYEQSSGDPGRVQLLYERAITD-FPVSSDLWLDYTQYLDKT---LKVGNVVRDVYSRATK 86
K+ +++GD R LY RA+T F +W +Y ++L + + + + DV RA
Sbjct: 226 KHAEATGDLCRG--LYARALTGVFAFDDTIWNEYVRFLSTSGTYAQSPHGMVDVLRRAVD 283
Query: 87 NCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEY-------LDLFLTRID 139
+CPW G +W R +L+ E +R EI + K A S E Y LD++
Sbjct: 284 HCPWSGTIWSRYILTAEDARLPFNEIEQIKHK----ATSNPELYKNGMAALLDMYAAWCG 339
Query: 140 GLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-------TDGLLRLYAYWAHLE 192
L+R+ + + +D + + RA+ +Q KN D RL +
Sbjct: 340 FLKRKAMDLNATDEDVD---VADMGLRAALEFVDQAKNRYGDSYRGDPNFRLERIYIQYL 396
Query: 193 QSMGKDMVSARGVWERL 209
+++ ARG+W +L
Sbjct: 397 TEKKRNLDEARGLWHKL 413
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
C F+ +N T ++LR +F G V+ ++I+ D TG+SRG ++ F + V
Sbjct: 4 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSF-EKPSSVDEVV 62
Query: 452 KNKQMFLGKKLSIARSNPKQRKDSSGE 478
K + + GK + R+ P+ +D +G+
Sbjct: 63 KTQHILDGKVIDPKRAIPRDEQDKTGK 89
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
++ N++ + + E+ R F G ++S I D TGKSRG +V+F+ E AAAV
Sbjct: 236 TNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKHESAAAAVE 295
Query: 452 K-NKQMFLGKKLSIARSNPKQRKD 474
+ N + + G+KL + R+ K ++
Sbjct: 296 ELNDKEYKGQKLYVGRAQKKHERE 319
>gi|108706237|gb|ABF94032.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 566
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 188 DQRTVFAYQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 247
Query: 450 VAKNKQMFLGKKLSIARS 467
+A + Q+ LG+++ + S
Sbjct: 248 IALSGQLLLGQQVMVKPS 265
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 380 AVPGRTKGFTDEC-TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYV 438
A P +TK + E F+ N++ E LR F + G +S +RI+ D+ +G+SRG YV
Sbjct: 248 AAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYV 307
Query: 439 DFIDDEHLAAAVAKNKQMFL-GKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTS 497
+F++ A A A K + L G+KL+I +N + AP E+AQS Q N G
Sbjct: 308 EFVNAADAAKAHAAKKDVELDGRKLNIDFANARSNA------APRERAQSRAQ--NFGDQ 359
Query: 498 ASKES 502
AS ES
Sbjct: 360 ASPES 364
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 384 RTKGFTDEC-----TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYV 438
R + F D+ T F+ NI+ A + FS+ G + +R+ D +G+ +G YV
Sbjct: 352 RAQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSILGVRLPTDPESGRPKGFGYV 411
Query: 439 DFID-DEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F DE +A N G+ + + S P+Q
Sbjct: 412 QFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQ 445
>gi|386816934|ref|ZP_10104152.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
gi|386421510|gb|EIJ35345.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
Length = 127
Score = 53.1 bits (126), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
++ N+ K T +LR F G VSS+ ++ DK TG+S+G +VD + AA+ N
Sbjct: 4 YVGNLPYKITENELRDLFGAYGEVSSVSMIKDKMTGQSKGFGFVDMPNAGEATAAINGLN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERA 480
+Q G+ + + + P++ + G+R
Sbjct: 64 EQAVQGRNIKVNEAKPREDRPRGGDRG 90
>gi|317050466|ref|YP_004111582.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
gi|316945550|gb|ADU65026.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
Length = 82
Score = 53.1 bits (126), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 47/78 (60%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
+ ++ N+ T ++L F++ G V SI+++ D+ TGK RG A+V+ D+E LAA A
Sbjct: 3 SIYVGNLPFSTTEDELGNLFAEYGDVYSIKLIADRETGKLRGFAFVEMEDNESLAAIEAL 62
Query: 453 NKQMFLGKKLSIARSNPK 470
+ F G+KL + + P+
Sbjct: 63 DGFEFGGRKLRVNEARPR 80
>gi|402858632|ref|XP_003893797.1| PREDICTED: LOW QUALITY PROTEIN: AT-rich interactive domain-containing
protein 4B, partial [Papio anubis]
Length = 1816
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G V ++RI+ D+ TG +G YV F + + + A
Sbjct: 1672 DKRSVFVGNLPYKVAESAVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 1731
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 1732 LKLNNSELMGRKLRVMRSVNKEK 1754
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 220
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQPKKQ-PIKDAVPGRTKGFTDECTAFLSNINLKA 403
D+ K++++ + +E RE + VE++ Q P A K D + F+ N++
Sbjct: 44 DEMKKRLKEMEDEAAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYAC 103
Query: 404 TYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLS 463
T E++++ F G V + IL DKF G+ +G AYV+F++ E + A+ N+ G++L
Sbjct: 104 TPEEVQQHFQTCGTVHRVTILTDKF-GQPKGFAYVEFVEVEAVQEALQLNESELHGRQLK 162
Query: 464 I--ARSNPKQRKDSSGER 479
+ R+N K G R
Sbjct: 163 VLQKRTNVPGLKQFRGRR 180
>gi|440638008|gb|ELR07927.1| hypothetical protein GMDG_02786 [Geomyces destructans 20631-21]
Length = 805
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ NI AT + R F G V+S + D+ GK+RG +V+FI+ EH +AAV + N
Sbjct: 246 YVKNIPADATDDQFRELFEKFGDVTSASLARDE-AGKNRGFGFVNFINHEHASAAVDELN 304
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
+ F+G+ L + R+ K ++
Sbjct: 305 GKDFMGQDLYVGRAQKKHERE 325
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 217 DQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 276
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASK 500
+A Q LG+ + + S A AQS+ +G A + ++
Sbjct: 277 IALTGQPLLGQAVMVKPSE-----------AEKNLAQSNATSGGAASGGAR 316
>gi|194763797|ref|XP_001964019.1| GF20948 [Drosophila ananassae]
gi|190618944|gb|EDV34468.1| GF20948 [Drosophila ananassae]
Length = 857
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 180/466 (38%), Gaps = 67/466 (14%)
Query: 42 VQLLYERAITDFPVSSDLWLDYTQYLDK-----------------TLKVG-----NVVRD 79
++ ++ER + FP + LWLDY +++ L++G N +
Sbjct: 321 IRFVFERCVAKFPTADALWLDYIRFMQDGDESKDLDEDQDALERLKLRLGRGHLSNEALE 380
Query: 80 VYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRID 139
+ R K P V L R L +ER+ ++++ E L + ++L L D
Sbjct: 381 LAKRGVKCRPSV-RLNHRYLHLMERADFEQKQVDLEVEALLKRIVPEMDMTVELHL---D 436
Query: 140 GLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKN-TDGLLRLYAYWAHLEQSMGKD 198
L R+ + + SL R+ FQ+A LS + D + WA +E +
Sbjct: 437 YLAYRVRNTNVADKEQTASL-RDAFQKAWIELSSWYGDLADTRYEIMQLWAQVEYTHLAS 495
Query: 199 MVSARGVWERLLKISGAMLEA--WQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDI 256
+ +W ++L G+ W S+ ME E + R I + ++ G +
Sbjct: 496 PANGALIWRQILGYPGSSHRGLLWLSFAQMESEYNSGQGTRDILREALNQPALEDGLM-V 554
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFR--------SQQESKSLPESADQKEH 308
R+ER YGT E P +R R QQ+ + P Q++
Sbjct: 555 QELLRRYERCYGTYESIAACQAIELPNEFPIRARRKPIQQQQQPQQQKNTNPRHQPQQQK 614
Query: 309 SVKKTGREKRKSDSNISYEQSPAKRQKHA------PQKPKKVHDKEKRQVQNLAEENEGR 362
+ +++R + +Q P K + P V K Q +L+E E
Sbjct: 615 NTNPRQQQERNAPQQRQQKQQPPKASEQTTFVAPRPVVSAAVAAKPTPQPTSLSEPREAH 674
Query: 363 ETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
K + + + K +++ P TK E+L+ FS G + +R
Sbjct: 675 -FKYSTQLETNKIFVRNLYPACTK-------------------EELQELFSPFGNIKDVR 714
Query: 423 ILHDKFTGKSRGLAYVDF-IDDEHLAAAVAKNKQMFLGKKLSIARS 467
++H K + +G+AYV+F + E A ++ + G K+S+A S
Sbjct: 715 LVH-KLNKQLKGIAYVEFELPAEAQKAVAGRDGCLLGGLKISVAIS 759
>gi|170585852|ref|XP_001897696.1| RNA recognition motif containing protein [Brugia malayi]
gi|312066609|ref|XP_003136351.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|158595003|gb|EDP33580.1| RNA recognition motif containing protein, putative [Brugia malayi]
gi|307768478|gb|EFO27712.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|402585724|gb|EJW79663.1| RNA-binding protein [Wuchereria bancrofti]
Length = 300
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I T EDL ++FS G V+ ++ +D+ TG+SRG A+V+F E AA+ +
Sbjct: 41 FVGGIAYDVTNEDLSQYFSQYGEVAQAQVKYDRNTGRSRGFAFVEFTTGEACRAALNARE 100
Query: 455 QMFLGKKLSIARSNPKQRK 473
Q GK + + + ++ K
Sbjct: 101 QSLKGKTVEVKPAKSRENK 119
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 386 KGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEH 445
K D + ++ N++ AT E++ + F G VS + I D+F+G +G AYV+F + E
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEG 131
Query: 446 LAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAP 481
+ A+A + G+++ + + S+ R P
Sbjct: 132 MQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNRPP 167
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 131 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 186
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 187 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 238
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 239 LQKGNGG 245
>gi|328873645|gb|EGG22012.1| polyadenylate-binding protein 2 [Dictyostelium fasciculatum]
Length = 243
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TD + ++ N+ +T E++ F G + I IL+DK TG +G Y++F++ E +
Sbjct: 96 TDGRSVYVGNVEYTSTQEEILLHFQPCGTIHRITILNDKMTGHPKGCCYIEFLEREAVTN 155
Query: 449 AVAKNKQMFLGKKLSIA 465
A+ N+ MF +++ +
Sbjct: 156 ALMLNETMFKDRQIKVT 172
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 11/111 (9%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 217 DQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMA 276
Query: 450 VAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASK 500
+A Q LG+ + + S A AQS+ +G A + ++
Sbjct: 277 IALTGQPLLGQAVMVKPSE-----------AEKNLAQSNATSGGAASGGAR 316
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F+S + + T +L FF G V +I+ DK +G+S+G+AYV+F ++ + AA
Sbjct: 238 DRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAA 297
Query: 450 VAKNKQMFLG 459
+A + + LG
Sbjct: 298 IALSGKRLLG 307
>gi|390331853|ref|XP_785806.3| PREDICTED: uncharacterized RNA-binding protein C365.04c-like
[Strongylocentrotus purpuratus]
Length = 206
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ I AT ED+ + FS G + S+R+ K TGKSRG Y++F +++ +A +
Sbjct: 73 FVGQIPYSATTEDVTKHFSTAGELKSVRLATHKDTGKSRGFGYIEFKNNKSYMRGLAMHL 132
Query: 455 QMFLGKKLSIARSNP 469
M G+ +++ ++P
Sbjct: 133 SMLHGRPINVEITSP 147
>gi|154344829|ref|XP_001568356.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065693|emb|CAM43465.1| putative RNA binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 458
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 10/170 (5%)
Query: 387 GFTDECTAFLSNINLKATYEDLRRFFSDVG--GVSSIRILHDKFTGKSRGLAYVDFIDDE 444
+ E + FL N+ T ED+ FF + G V +R++ D+ TG +G YV+F+
Sbjct: 268 AYPPETSIFLGNVAYDTTEEDVWNFFQEHGIRDVKRVRLVRDRETGDCKGFGYVEFMHAS 327
Query: 445 HLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSI 504
+ A+ G++L I N S +A T + ++ + G E
Sbjct: 328 SVHPAIETRGDKLNGRELRIVHVN-----KSKEVKAATTSRREKRRNEHGGDRGGAEERK 382
Query: 505 ETSKQSRGRGDSVQLKGKNTFAVPRNVRPLGFPA---IKPKTEEGEDLKP 551
+ RG S +G + F PRN L A P+ + +DL+P
Sbjct: 383 RARSEGDSRGGSRSNQGSSNFKKPRNESDLPSWAGLTTNPRRKMPKDLRP 432
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%)
Query: 382 PGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI 441
P T+ D T F+ + + ++L FF VGGV +I+ D+ +G+S+G+ YV+F
Sbjct: 154 PKLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGGVKEAQIVKDRVSGRSKGVGYVEFK 213
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQT 491
+ E + A+A Q LG + + + ++ + + E + + H++T
Sbjct: 214 EAESVPKAIALTGQRLLGIPIIVQLTEAEKNRQARAEGGQHNRDEDHRRT 263
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 331 AKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQ--PKKQPIKDAVPGRTKGF 388
A + H K++ D +KR + E + RE + VE++ + P +V K
Sbjct: 7 AMKNSHPNHTTKELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDPAGSSVSQAEKEE 66
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ T E++++ F G V+ + IL DKF G+ +G AYV+F++ + +
Sbjct: 67 VDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEADAVQN 125
Query: 449 AVAKNKQMFLGKKLSIA--RSN 468
A+ N+ G++L ++ R+N
Sbjct: 126 ALILNETELHGRQLKVSAKRTN 147
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|218437654|ref|YP_002375983.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
gi|218170382|gb|ACK69115.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7424]
Length = 110
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDF-IDDEHLAAAV 450
+ ++ NI + T +D++ F + G V +++ D+ +G+ RG A+VD +D+ +A
Sbjct: 1 MSIYVGNIPYQVTQDDIKEVFGEYGTVKQVKLPVDRESGRVRGFAFVDLDTEDQENSAIE 60
Query: 451 AKNKQMFLGKKLSIARSNPKQRKDSSG 477
A + ++G++L ++++ P+Q K SG
Sbjct: 61 ALDGAEWMGRELKVSKARPRQDKGPSG 87
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA-VAKN 453
FL NI AT +D R+ FS G + + I D TG+S+G AYV F + ++ A A V +
Sbjct: 333 FLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELD 392
Query: 454 KQMFLGKKLSIARSNPKQ 471
KQ+F G+ L I ++ K+
Sbjct: 393 KQIFQGRLLHILPADAKK 410
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|198470802|ref|XP_001355406.2| GA17297 [Drosophila pseudoobscura pseudoobscura]
gi|198145627|gb|EAL32464.2| GA17297 [Drosophila pseudoobscura pseudoobscura]
Length = 772
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 116/558 (20%), Positives = 203/558 (36%), Gaps = 97/558 (17%)
Query: 44 LLYERAITDFPVSSDLWLDYTQYLDKTLKVGNVVRDVYSRATKNCPWVGELWVRSLLSLE 103
+++E I+ FP +WLDY + + ++K R T G + S L L
Sbjct: 271 VVFEITISHFPQIERVWLDYINFTNNSVK----------RPT------GGYQISSALDLA 314
Query: 104 RSRASEEEISTVFEKSLLCAFSTFEEYLDLFLTRIDGLRRRILFS--GEVEGVLDY---- 157
+ RA+ S + L+ T + + G+ R+ + VE LDY
Sbjct: 315 K-RAAMSTYSKLVNHKLIHLMETEGHTVQEVDNVLKGIFHRLAINIKATVELHLDYLAFM 373
Query: 158 ------------SLIRETFQRA----SDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVS 201
+ +RE F A SD E + +L+LY A +E + K+
Sbjct: 374 VRQCDVSDSDQCTRVRERFDGAWNTLSDLYGEDADTSYEVLQLY---AQVEYAKFKNPAL 430
Query: 202 ARGVWERLLKI-----SGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTGTGSEDI 256
+WE ++ SG + W ++ ME + + R + +RF G+ +
Sbjct: 431 GYKIWEYIMSFDKSQQSGYL---WMTWAQMESQFNGGVRCRDVLNLALKQRFLKDGNF-V 486
Query: 257 CHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESADQKEHSVKKTGRE 316
+ R+ER +G + + P + R QQ ++ Q+E +T +
Sbjct: 487 LEQYRRYERCHGDYKSITTCQKIKLPAERNYGIHRYQQHARE-----QQRERKPYRTSQP 541
Query: 317 KRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENEGRETKQTVEEQPKKQP 376
++ +++ +P + P+ A G + +E
Sbjct: 542 PLRAQASVRATAAPRAKAAVPPRATTAAPRATAAPRATAAPPVSGLKYSTELE------- 594
Query: 377 IKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR--- 433
+TK F + NI AT E L F+ G + +RI+ K SR
Sbjct: 595 -------KTKVF-------VKNILPNATTETLNELFATCGTLKDVRIVQKKLPIGSRQYK 640
Query: 434 ---GLAYVDFIDDEHLAAAVAK-NKQMFLGKKLSIARSNPKQRKD---SSGERAPTEQAQ 486
+AY+++ E AV + N G LS+A S+P + ++ R T
Sbjct: 641 TRKNIAYIEYEQAESAQKAVEQLNGHNLNGSVLSVAISDPPPKTSNITTAKRRVATSLIP 700
Query: 487 SHQQTGNAGTSASKESSIETSKQSRGRGDSVQLK-GKNTFAVPRNVRP--LGFPAIKPKT 543
S T K S++ + + + V +K G A+ P P P+
Sbjct: 701 SIVTREMLATKRRKVLSLDNEADAATKTEDVDMKDGDKATAIAPATNPDSCNTPLTSPE- 759
Query: 544 EEGEDLKPKSNDEFRKMF 561
KPKSN++FRK+
Sbjct: 760 ------KPKSNEDFRKLL 771
>gi|320582907|gb|EFW97124.1| RNA recognition motif-containing protein [Ogataea parapolymorpha
DL-1]
Length = 712
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F+ +I ++AT E+L FFS V I+ D GKSRG +V F+ DE +A
Sbjct: 15 DRRTLFVQSIPVEATKEELNEFFSQYAPVRHSVIVTDT-EGKSRGFGFVSFVTDEDALSA 73
Query: 450 VAKNKQM-FLGKKLSIARSNPKQRKDSSGERA-PTEQAQSHQQ 490
+ + K+ F K L ++ + +QRKD +A P E A+ Q
Sbjct: 74 LKETKKAKFKNKLLRVSIAKRRQRKDKKDNQAKPAEDAKFKSQ 116
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 93/464 (20%), Positives = 177/464 (38%), Gaps = 41/464 (8%)
Query: 14 RQDLSDSEKFQQYMIYLKYEQSSGDPGRVQLLYERAITDFPVSSDLWLDYTQYLDKTLKV 73
R E+ Q + YL++E S +P + LY+R + +P S W +Y ++ +
Sbjct: 644 RNSYGQDEEGQAWSEYLEWESSQNNPDLGKALYQRCVLRYPTDSAAWEEYICFMLEKKGS 703
Query: 74 GNVVRDVYSRATKNCPWVGELWVRSLLSLERSRASEEEISTVFEKSLLC-AFSTFEEYLD 132
V + AT +C W G LW +L+ + + E I + ++ EE
Sbjct: 704 DPDVLPLLELATAHCQWSGVLWSHRILAFDVRQQPLESIERIKHQATTSRLMEDKEENFK 763
Query: 133 LFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLR----LYAYW 188
+ L L+RR G +G+ D S K D R L A+
Sbjct: 764 VNLAWCGVLKRR----GVAKGIDDTDFDSAQLGLRSAVSEFGPKGVDKDYRIARLLVAFL 819
Query: 189 AHLEQSMGKDMVSARGVWERL-----LKISGAMLEAWQSYISMEIELDHINEARSIYKRC 243
++ D+ A VW+ L + SG E W Y + A ++ KR
Sbjct: 820 TEID-----DLPEAEKVWKDLETDKDMGRSGE-YEFWLRYYGWAFRNLGNSGAVAVLKRA 873
Query: 244 YSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEELRLFRSQQESKSLPESA 303
+ T E I + E+G + ++ ++ + + R Q+ ++ E
Sbjct: 874 VTYWETLDWPEKIIDVYQNQIEEHGEGAAIEGAMMEIRRLRKRVARRRQQEALEA--EQV 931
Query: 304 DQKEHSVKKTG---REKRKSDSNISYEQSPAKRQKHAPQKPKKVHDKEKRQVQNLAEENE 360
Q + G + KR+ +N+ + ++ A + D + + ++EE E
Sbjct: 932 AQAQAVAIPVGFDLKGKRRRSTNVEEDDELPHKKARASE------DIDVGSIPPVSEETE 985
Query: 361 GRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSS 420
E Q E +K+ K R K T F N+ +R+FF D G +++
Sbjct: 986 AAEADQNGESSAEKE--KKNTRDREK-----LTVFAKNLPPDVDELTVRKFFKDCGTINA 1038
Query: 421 IRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSI 464
++ + A ++F + + AA ++K+ G+++++
Sbjct: 1039 FTMIE---ADDNSATASIEFQNAADVLAAQTRDKKRLNGREITV 1079
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
F+ NI+ AT +D+R FS G V SIR++ K G G ++DF E A++ ++
Sbjct: 1178 FVRNIDYAATEDDIRELFSKYGTVKSIRLI-SKGRGVHSGYGFLDFETTESANASLELHE 1236
Query: 455 QMFLGKKLSIARSNPK----QRKDSSGE---RAPTEQAQSHQQTGNAGTSASKE 501
Q F +KL + S P+ K SSG+ + P A S + G+ ++ + E
Sbjct: 1237 QKFKSRKLLVVISEPQGGAPANKKSSGKTQAKFPNGAAGSPEVAGSPMSTTASE 1290
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 147 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 202
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 203 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 254
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 255 LQKGNGG 261
>gi|402086166|gb|EJT81064.1| translation initiation factor 4B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 557
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
TA L N++ AT E + FF++ + S+RI+ D+ G+ +G YV+F + L A+
Sbjct: 52 TAHLGNLSYDATQEIVSDFFAECE-IVSVRIVEDREQGRPKGFGYVEFASADGLKQALTL 110
Query: 453 NKQMFLGKKLSIARSNPKQRKDSSGERAPTE 483
+ F G+ + + ++P + +D G+ P E
Sbjct: 111 DGASFQGRSIRVRIADPPKDRDGRGDGPPRE 141
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 46/76 (60%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ ++ +T E+L + F G ++ + I+ DK++G+ +G AY++F + E + A
Sbjct: 85 ADNRSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKGFAYIEFTEKESVDA 144
Query: 449 AVAKNKQMFLGKKLSI 464
A+A + MF +++ +
Sbjct: 145 AIALDGSMFRDRQIKV 160
>gi|66359862|ref|XP_627109.1| RRP5 like protein involved in rRNA biogenesis with 7 S1 domains and 5
HAT repeats [Cryptosporidium parvum Iowa II]
gi|46228533|gb|EAK89403.1| RRP5 like protein involved in rRNA biogenesis with 7 S1 domains and 5
HAT repeats [Cryptosporidium parvum Iowa II]
Length = 2002
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 179 DGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIEL-------- 230
D ++RL A LE G ++ R ++E LL+ + ++ W Y + +L
Sbjct: 1878 DKVVRLITDIARLEFEYG-NINRGRTIFENLLEENSKRMDLWSQYFDILTKLCSKDNPKS 1936
Query: 231 -----DHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDH 275
DHI ARSI+ C K F + I WL FE+E+G+L+ H
Sbjct: 1937 NSSMADHIEMARSIFSSCIEKNFKPRSMKMIFTRWLSFEKEFGSLQSQKH 1986
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ NI + T ++ R F G ++S + HD TGKSRG +V++I+ E AV + N
Sbjct: 245 YVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKAVDELN 304
Query: 454 KQMFLGKKLSIARSNPKQRKD 474
F G+KL + R+ K ++
Sbjct: 305 DSDFHGQKLYVGRAQKKHERE 325
>gi|268680880|ref|YP_003305311.1| RNP-1 like RNA-binding protein [Sulfurospirillum deleyianum DSM
6946]
gi|268618911|gb|ACZ13276.1| RNP-1 like RNA-binding protein [Sulfurospirillum deleyianum DSM
6946]
Length = 101
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
++ N+ + T + L+ FS G VSS RI++D+ TG+S+G +V+ +D AA+ A N
Sbjct: 4 YVGNVKYEMTGDQLKEMFSAYGEVSSARIINDRETGRSKGFGFVEMPNDSEAKAAIEATN 63
Query: 454 KQMFLGKKLSIARSNPKQ 471
++ G+ L + + P++
Sbjct: 64 EKEIGGRTLKVNEARPRE 81
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 376 PIKDAVPGRTKGFTDE-----CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTG 430
P D R K F D+ T F+ N++ + +D+ FS+ G VS +R+ D +G
Sbjct: 291 PKGDVTENRAKKFNDQRSAPSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSG 350
Query: 431 KSRGLAYVDFIDDEHLAAAV-AKNKQMFLGKKLSIARSNPKQR 472
+ +G YV+F E AA+ A Q G+ L + S P+ R
Sbjct: 351 RPKGFGYVEFAAQESAQAAIDAMTGQELAGRPLRLDFSTPRDR 393
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 363 ETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIR 422
E + EE+ + P ++ P ++ D T F+ + + ++L FF VG V +
Sbjct: 148 EADKPREERRPRSPKREGTPPLSEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQ 207
Query: 423 ILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLG 459
I+ D+ +G+S+G+ YV+F ++E + AA+ Q LG
Sbjct: 208 IVKDRVSGRSKGVGYVEFKNEESVPAAIQLTGQRLLG 244
>gi|384494771|gb|EIE85262.1| hypothetical protein RO3G_09972 [Rhizopus delemar RA 99-880]
Length = 218
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 394 AFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
F+ N+ T E+L++ FS V + S+R+L DK TGK +G A+++F + + L A++ +
Sbjct: 97 VFIGNLPFTTTKEELQKHFSTVENIKSLRLLTDKATGKPKGFAFMEFTNSKDLNKALSFH 156
Query: 454 KQMFLGKKLSI--------ARSNPKQRK-DSSGERAPTEQAQSHQQTGNAGTSAS 499
F +++++ ++S+ ++ K +R E+A+ H++ T S
Sbjct: 157 HTFFKRRQINVELTAGGGGSKSDARKEKLKEKNKRLTEERAKKHEKIKFTNTQQS 211
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ + T +L +F+ G + + IL DKF+G +G AY++F + A
Sbjct: 149 ADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKGYAYIEFATESSAQA 208
Query: 449 AVAKNKQMFLGKKLSI 464
AV + +F G+ + +
Sbjct: 209 AVELDNSVFRGRVIKV 224
>gi|361128675|gb|EHL00605.1| putative RNA-binding protein rsd1 [Glarea lozoyensis 74030]
Length = 694
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 374 KQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSR 433
+ P ++A P T+ D T F+ + + DL FF VG V +I+ D+ +G+S+
Sbjct: 331 RSPKREATPPLTEDERDRRTVFVQQLAARLRTRDLIGFFEKVGPVKEAQIVKDRVSGRSK 390
Query: 434 GLAYVDFIDDEHLAAAVAKNKQMFLG 459
G+ YV+F ++E + AA+ Q LG
Sbjct: 391 GVGYVEFKNEESVPAAIQLTGQKLLG 416
>gi|344301140|gb|EGW31452.1| multiple RNA-binding domain-containing protein 1 [Spathaspora
passalidarum NRRL Y-27907]
Length = 841
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 359 NEGRETKQTVEEQPKKQPIKDA--VPGRT------KGFTDECTAFLSNINLKATYEDLRR 410
NE +E + E+PKKQP A VP ++ + + F+ NI +T D R
Sbjct: 270 NEQQEQTEEPSEEPKKQPRMQAPVVPQKSPEEQTVEKLQETGRLFIRNILYDSTENDFRN 329
Query: 411 FFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKNKQMFLGKKLSIARSNP 469
F G + + I D TGKS+G YV F + E A + +KQ+F G+ L I +
Sbjct: 330 LFEPYGTLEEVHIAIDTRTGKSKGFVYVQFANPEDAVRAYKSLDKQIFQGRLLHILAGDK 389
Query: 470 KQ 471
K+
Sbjct: 390 KK 391
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 131 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 186
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 187 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 238
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 239 LQKGNGG 245
>gi|332236264|ref|XP_003267324.1| PREDICTED: RNA-binding protein 34 [Nomascus leucogenys]
Length = 430
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G + ++RI+ DK TG +G YV F + + + A
Sbjct: 285 DKRSVFVGNLPYKVEESAVEKHFLDCGSILAVRIVRDKMTGIGKGFGYVLFENTDSVHLA 344
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 345 LKLNNSELMGRKLRVMRSVNKEK 367
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 175 EKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 234
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG 492
+G+AYV+F + + + A+ Q LG + + + S E+ ++ Q G
Sbjct: 235 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANNLQKG 286
Query: 493 NAG 495
N G
Sbjct: 287 NGG 289
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 131 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 186
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSS 476
+ +S+G+AYV+F + + + A+ Q LG + + S ++ + ++
Sbjct: 187 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRPAA 234
>gi|384502056|gb|EIE92547.1| hypothetical protein RO3G_17145 [Rhizopus delemar RA 99-880]
Length = 325
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 110 EEISTVFEKSLLCA--FSTFEEYLDLFLTRIDGLRRRILFSGEVEGVLDYSLIRETFQRA 167
++I+ F+K+L ++ E+ + + L + + RR+I + E D +R F+ +
Sbjct: 9 DQINDTFDKALSSQQLLASIEDLVAVLLAKCNYYRRKIDWEDPAED--DVMNLRVAFEES 66
Query: 168 SDYLSEQMKNTDGLLRLYAYWAHLEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISME 227
YL E G + Y+ + D+ AR +WE +++ +G EAW YI E
Sbjct: 67 LVYLHE------GKAKYYSV-------LLGDIDKARELWEHIVRKNGRSAEAWIQYIYFE 113
Query: 228 IELDHINEARSIYKRCYSKRFTGTGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEEL 287
+L + + ++++K+ KR + W E E G LE ++ ++ ++ + + L
Sbjct: 114 RDLGNYVKCQTLFKKSIIKRIDDPAR--LIEVWNSIEYEMGNLESYEDALVRINSKTKML 171
Query: 288 RLFRSQQESKSLPESADQKEHSVKKTGREKRK 319
+ + L E ++++ + K KRK
Sbjct: 172 ----TNEWHAQLVEQEEKEQRKISKELETKRK 199
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 191 EKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 250
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG 492
+G+AYV+F + + + A+ Q LG + + + S E+ ++ Q G
Sbjct: 251 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANNLQKG 302
Query: 493 NAG 495
N G
Sbjct: 303 NGG 305
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFI-DDEHLAAAV 450
+ ++ N++ + T +DLR F+D G V ++I D+ T + RG A+V+ D+E LAA
Sbjct: 1 MSIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIE 60
Query: 451 AKNKQMFLGKKLSIARSNPKQ 471
A + ++G++L + ++ P++
Sbjct: 61 ALDGADWMGRQLKVNKARPRE 81
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV- 450
++ NI+ T E+ R F G ++S + D +GKSRG +V+F ++ AAAV
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 451 AKNKQMFLGKKLSIARSNPKQRKD 474
A N + F G+KL + R+ K ++
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHERE 319
>gi|222612890|gb|EEE51022.1| hypothetical protein OsJ_31660 [Oryza sativa Japonica Group]
Length = 548
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ T F ++LKA D+ FFS G V +R++ D+ + +S+G+ Y++F D + A
Sbjct: 175 DQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMA 234
Query: 450 VAKNKQMFLGKKLSI----ARSNPKQRKDSSGERA 480
+A Q+ LG+++ + A N Q +SG A
Sbjct: 235 IALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIA 269
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|449297210|gb|EMC93228.1| hypothetical protein BAUCODRAFT_46871, partial [Baudoinia
compniacensis UAMH 10762]
Length = 479
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 406 EDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMF---LGKKL 462
E L R FS G V S+R++ D T +G+AYV F D+ + AA+ +++ F L +KL
Sbjct: 303 EGLWRTFSKCGTVESVRVIRDSTTRVGKGVAYVQFEDENGVEAALGYDEKKFPPMLPRKL 362
Query: 463 SIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSR 511
++R+ +R G P A + + G G K S E S+ R
Sbjct: 363 RVSRARAVKRNAKPGSGRPGSNATAGKTAGERGGYTRKVSGEEASRAGR 411
>gi|296082546|emb|CBI21551.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 64/118 (54%), Gaps = 7/118 (5%)
Query: 350 RQVQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLR 409
R+++ + E E RE+++ +++ +P D P R D+ T F + LKAT D+
Sbjct: 97 RELRERSREIEPRESRRFKDKKEAVEPEAD--PER-----DQRTVFAYQMPLKATERDVY 149
Query: 410 RFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
FFS G V +R++ D+ + +S+G+ Y++F D + A+A + + G+ + + S
Sbjct: 150 EFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPS 207
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 346 DKEKRQVQNLAEENEG-RETKQTVEEQ--PKKQPIKDAVPGRTKGFTDECTAFLSNINLK 402
D+ +R+++ + EE RE VE++ + P A K D + F+ N++
Sbjct: 39 DEMRRRLKEMEEEAAALREMHAKVEKEIGSVQDPASVAASQENKEEADARSVFVGNVDYA 98
Query: 403 ATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKL 462
T E++++ F G V+ + IL DKF G+ +G AYV+F++ E + A+ ++ G++L
Sbjct: 99 CTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVETEAVQEALLLSESELHGRQL 157
Query: 463 SI 464
+
Sbjct: 158 KV 159
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|213405933|ref|XP_002173738.1| U3 snoRNP-associated protein Rrp5 [Schizosaccharomyces japonicus
yFS275]
gi|212001785|gb|EEB07445.1| U3 snoRNP-associated protein Rrp5 [Schizosaccharomyces japonicus
yFS275]
Length = 1703
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 54/276 (19%)
Query: 46 YERAITDFPVSSDLWLDYTQY------LDKTLKVGNVVRDVYSRATKNCPWVGE-----L 94
+ER + P SS LW+ Y Y +DK+ ++G RA K + E +
Sbjct: 1442 FERKLLSEPNSSLLWIGYMAYHLGLNEIDKSREIGQ-------RALKAINFREEEEKLNV 1494
Query: 95 WVRSLLSLERSRASEEEISTVFEKSL-----------LCAFSTFEEYLDLFLTRIDGLRR 143
WV +LL+LE + +EE + F+++ LC ++ LDL ++ + +
Sbjct: 1495 WV-ALLNLEVAYGNEETLDKTFKEACHFYDELVVYERLCGILIKQQRLDLAKEYMERMVK 1553
Query: 144 RILFSGEVEGVLDYSLIRETFQRASDYLSEQMKNTDGLLR-------------LYAYWAH 190
R FS L+Y+ TF ++D + GLL+ +A
Sbjct: 1554 R--FSQIASVWLNYA----TFLMSND----DAEAARGLLQRSLQSLPKKDHVSTIEKFAL 1603
Query: 191 LEQSMGKDMVSARGVWERLLKISGAMLEAWQSYISMEIELDHINEARSIYKRCYSKRFTG 250
LE G D R ++E LL L+ W + MEI+ ++ R +++R + + +
Sbjct: 1604 LEFKQG-DPERGRTIFEGLLSNYPKRLDLWNVLLDMEIKQGDVSIVRRLFQRLLANKLSL 1662
Query: 251 TGSEDICHAWLRFEREYGTLEDFDHSVQKVTPRLEE 286
++ + WL FE+++GT E + Q+ +E+
Sbjct: 1663 KKAKFVFKKWLLFEKDHGTPEGVEDVKQRAAEYVEQ 1698
>gi|383872573|ref|NP_001244577.1| RNA-binding protein 34 [Macaca mulatta]
gi|380810788|gb|AFE77269.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
gi|383416755|gb|AFH31591.1| RNA-binding protein 34 isoform 1 [Macaca mulatta]
Length = 427
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D+ + F+ N+ K + + F D G V ++RI+ D+ TG +G YV F + + + A
Sbjct: 285 DKRSVFVGNLPYKVAESAVEKHFLDCGSVMAVRIVRDQVTGIGKGFGYVLFENTDSVHLA 344
Query: 450 VAKNKQMFLGKKLSIARSNPKQR 472
+ N +G+KL + RS K++
Sbjct: 345 LKLNNSELMGRKLRVMRSVNKEK 367
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT +DL F++ G V + + D+ TGK RG A+V+ +D H A++
Sbjct: 1 MTIYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVELEEDAHEDTAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPKQ 471
+ + ++G++L + ++ P++
Sbjct: 61 ELDGAEWMGRQLKVNKAKPRE 81
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVA 451
T ++ N++ +AT DL+ F+D G V + + D+ TGK RG A+V+ +D AA++
Sbjct: 1 MTIYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFVEMNEDAQEDAAIS 60
Query: 452 K-NKQMFLGKKLSIARSNPKQ 471
+ + ++G++L + ++ PK+
Sbjct: 61 ELDGAEWMGRQLRVNKAKPKE 81
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV- 450
++ NI+ T E+ R F G ++S + D +GKSRG +V+F ++ AAAV
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 451 AKNKQMFLGKKLSIARSNPKQRKD 474
A N + F G+KL + R+ K ++
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHERE 319
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 147 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 202
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 203 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 254
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 255 LQKGNGG 261
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 147 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 202
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 203 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 254
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 255 LQKGNGG 261
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
V + E NE E Q + +P+ P + + + F+ NI+ +A+ ED R
Sbjct: 274 VPEVKEVNEVTEVTQQSDNEPELTPEEQIA----QKIEETGRLFIRNISYEASEEDFRNL 329
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKNKQMFLGKKLSIARSNPK 470
FS G + + I D TGKS+G YV F+ E A + +KQ+F G+ L I ++ K
Sbjct: 330 FSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSLDKQIFQGRLLHILPADKK 389
Query: 471 Q 471
+
Sbjct: 390 K 390
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 147 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 202
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 203 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 254
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 255 LQKGNGG 261
>gi|384489930|gb|EIE81152.1| hypothetical protein RO3G_05857 [Rhizopus delemar RA 99-880]
Length = 293
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILH-DKFTGKSRGLAYVDFIDDEHLAAAVAKN 453
++ N++ T E +R FF+D G ++ ++ + K++G AY+ F E A A+AK+
Sbjct: 95 WVGNLSYSTTVETIRNFFTDCGSITRVKCPKGNGVKNKNKGFAYIFFATTEEQAKAIAKS 154
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTE 483
+Q G+ L I + +R D G +APTE
Sbjct: 155 EQELEGRSLLIKDAENFERAD--GSKAPTE 182
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-A 451
T FL N++ T + +R F G + +R+ + +GK +G AYVD+ E A+ A
Sbjct: 198 TIFLGNLSFDTTEKSIREAFEWAGDIRKVRVATFEDSGKCKGFAYVDYHTVEAATKAIRA 257
Query: 452 KNKQMFLGKKLSI 464
+K F G+K +
Sbjct: 258 PDKHTFDGRKCRV 270
>gi|413942254|gb|AFW74903.1| hypothetical protein ZEAMMB73_929566 [Zea mays]
Length = 647
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N+ T +DL++FFS+ +SSIR DK TG +G A+VDF D LAAA+ ++
Sbjct: 279 YVGNLPWDITDDDLKKFFSECK-ISSIRFGTDKETGGFKGYAHVDFSDSASLAAALKLDQ 337
Query: 455 QMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG-NAGTSASKESSIETSKQSRGR 513
++ + + I + PK+ + ++ +S +T GT SS K S R
Sbjct: 338 KVIKERPVRIRCAVPKKDNQKVNDNGNSDHLKSKTRTCYECGTPGHFSSSCPNKKDSEAR 397
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 392 CTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV- 450
++ NI+ T E+ R F G ++S + D +GKSRG +V+F ++ AAAV
Sbjct: 236 TNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVE 295
Query: 451 AKNKQMFLGKKLSIARSNPKQRKD 474
A N + F G+KL + R+ K ++
Sbjct: 296 ALNDKDFKGQKLYVGRAQKKHERE 319
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|443477394|ref|ZP_21067245.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017490|gb|ELS31918.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 95
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK 452
T ++ N++ +A +DL FSD G V +++ D+ TG+ RG A+VD DD AA+A
Sbjct: 2 TIYVGNLSYQAAKDDLTSVFSDYGTVKRVQLPTDQETGRVRGFAFVDMEDDAQEEAAIAA 61
Query: 453 -NKQMFLGKKLSIARSNPKQRKDSS 476
N+ ++G+ L + ++ P+ + ++
Sbjct: 62 LNEAEWMGRTLRVNKAKPRGERTNN 86
>gi|441667161|ref|XP_004091953.1| PREDICTED: probable RNA-binding protein 23 [Nomascus leucogenys]
Length = 319
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 147 EKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 206
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+G+AYV+F + + + A+ Q LG + + S
Sbjct: 207 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQAS 241
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 131 EKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 190
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG 492
+G+AYV+F + + + A+ Q LG + + + S E+ ++ Q G
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANNLQKG 242
Query: 493 NAG 495
N G
Sbjct: 243 NGG 245
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|307214018|gb|EFN89225.1| Heterogeneous nuclear ribonucleoprotein 27C [Harpegnathos saltator]
Length = 263
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR +
Sbjct: 27 LQNGPHQLDGR----TIDPKPCN-PRTLQKPKRSGGFPK---VFLGGLPSNVTETDLRSY 78
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D+E + VA++ GK++ I R+ P
Sbjct: 79 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEP-- 136
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 137 -RDSSSKMNDSHQGQ 150
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|341884119|gb|EGT40054.1| hypothetical protein CAEBREN_26109 [Caenorhabditis brenneri]
Length = 401
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 379 DAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSD-VGGVSSIRILHDKFTGKSRGLAY 437
D V + K F + F+ N+ + T + L FFS+ +G V +RI+ DK TGK +G A+
Sbjct: 240 DKVGNKKKDFGKDLAIFVGNLPFETTEDALITFFSEQIGPVEGVRIVRDKDTGKGKGFAF 299
Query: 438 VDFIDDEHLAAAVA 451
V+F D ++ A++
Sbjct: 300 VNFKQDSSVSLALS 313
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|33150650|gb|AAP97203.1|AF087905_1 splicing factor SF2 [Homo sapiens]
Length = 425
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 131 EKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 190
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTG 492
+G+AYV+F + + + A+ Q LG + + + S E+ ++ Q G
Sbjct: 191 KGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANNLQKG 242
Query: 493 NAG 495
N G
Sbjct: 243 NGG 245
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 146 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 201
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F + + + A+ Q LG + + S
Sbjct: 202 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQAS 240
>gi|224134274|ref|XP_002321779.1| predicted protein [Populus trichocarpa]
gi|222868775|gb|EEF05906.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + ++ N++ T E++++ F G V+ + IL DKF G+ +G AYV+FI+ + +
Sbjct: 94 VDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFIEVDAVQN 152
Query: 449 AVAKNKQMFLGKKLSIA--RSNPKQRKDSSGER 479
AV N+ G++L ++ R+N K G R
Sbjct: 153 AVLLNESELHGRQLKVSAKRTNVPGMKQYRGRR 185
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 131 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 186
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 187 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 238
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 239 LQKGNGG 245
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 131 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 186
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSH 488
+ +S+G+AYV+F + + + A+ Q LG + + + S E+ ++
Sbjct: 187 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV--------QASQAEKNRLAAMANN 238
Query: 489 QQTGNAG 495
Q GN G
Sbjct: 239 LQKGNGG 245
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|330933365|ref|XP_003304145.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
gi|311319437|gb|EFQ87756.1| hypothetical protein PTT_16602 [Pyrenophora teres f. teres 0-1]
Length = 193
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
D + F+ N++ A+ E+++ F +G ++ + IL DKFTG +G AYV+F + +
Sbjct: 66 VDARSVFVGNVDYGASPEEIQAHFQSIGSINRVTILLDKFTGHPKGYAYVEFTEPHLVNE 125
Query: 449 AVAKNKQMFLGKKLSIA 465
A+ + F + L +
Sbjct: 126 ALVLDNSEFRSRNLKVV 142
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 16 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 75
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 76 LNGREFSGRALRV 88
>gi|307170451|gb|EFN62721.1| Heterogeneous nuclear ribonucleoprotein 27C [Camponotus floridanus]
Length = 275
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 11/135 (8%)
Query: 352 VQNLAEENEGRETKQTVEEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRF 411
+QN + +GR T++ +P P P R+ GF FL + T DLR +
Sbjct: 27 LQNGPHQLDGR----TIDPKPCN-PRTLQKPKRSGGFPK---VFLGGLPSNVTETDLRSY 78
Query: 412 FSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARSNPKQ 471
F+ G V + I++D+ KSRG ++ F D+E + VA++ GK++ I R+ P
Sbjct: 79 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEP-- 136
Query: 472 RKDSSGERAPTEQAQ 486
+DSS + + Q Q
Sbjct: 137 -RDSSSKMNDSHQGQ 150
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 369 EEQPKKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKF 428
E+ P ++PI + P D T F + + DL FFS VG V +RI+ D+
Sbjct: 149 EKSPVREPIDNLSPEER----DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRN 204
Query: 429 TGKSRGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+ +S+G+AYV+F + + + A+ Q LG + + S
Sbjct: 205 SRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQAS 243
>gi|68471223|ref|XP_720388.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|77022430|ref|XP_888659.1| hypothetical protein CaO19_7097 [Candida albicans SC5314]
gi|46442253|gb|EAL01544.1| hypothetical protein CaO19.7097 [Candida albicans SC5314]
gi|76573472|dbj|BAE44556.1| hypothetical protein [Candida albicans]
gi|238883199|gb|EEQ46837.1| polyadenylate-binding protein 2 [Candida albicans WO-1]
Length = 187
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 389 TDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAA 448
TD + ++ N++ +T +L++ FS G V+ + IL +KFTG+ +G AY++F D + +
Sbjct: 60 TDARSIYIGNVDYGSTPLELQQHFSSAGVVNRVTILTNKFTGQPKGFAYLEFADTDAVNK 119
Query: 449 AVA 451
AVA
Sbjct: 120 AVA 122
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 390 DECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAA 449
D T F+ + + +DL FF G V +I+ D+ +G+S+G+ YV+F ++E +AAA
Sbjct: 164 DRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEESVAAA 223
Query: 450 VAKNKQMFLG 459
+ QM LG
Sbjct: 224 IRLTGQMLLG 233
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAK-N 453
++ N++ T +DL F G + +++ D+ TG+S+G A+V F + E A+ K N
Sbjct: 268 YVGNVHFSITEDDLTNVFEPFGELEFVQLQKDE-TGRSKGYAFVQFANPEQARDALEKMN 326
Query: 454 KQMFLGKKLSIARSNPKQRKDSSGERAPTEQAQSHQQTGNAGTSASKESSIETSKQSRGR 513
G+ + + N K D+ R +G S++ +S+ + S S
Sbjct: 327 GFELAGRAIRVGLGNDKFTPDAHANRP-------------SGASSTNQSNFQGSSFSGQG 373
Query: 514 GDSVQLKGKNTF 525
G VQ G N F
Sbjct: 374 GRGVQAGGSNNF 385
>gi|268536642|ref|XP_002633456.1| Hypothetical protein CBG06224 [Caenorhabditis briggsae]
Length = 393
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 383 GRTKGFTDECTAFLSNINLKATYEDLRRFFSD-VGGVSSIRILHDKFTGKSRGLAYVDFI 441
G KGF + F+ N+ T + L FF++ VG + ++RI+ DK +GK +G A+V+F
Sbjct: 237 GTKKGFGKDMAIFVGNLPFDITEDTLSNFFTEKVGAIEAVRIIRDKDSGKGKGFAFVNFK 296
Query: 442 DDEHLAAAVAKNKQMFLGKKLSIARSNPK---QRKDSSGERAPTEQAQSH 488
D + A++ + L I + K + S+ +RAP + Q+
Sbjct: 297 QDSSASLALSMETIKMDKRDLRITKVMKKGHLTKIQSAKKRAPLSKKQTE 346
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 393 TAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDE-HLAAAVA 451
+ F+ NI +AT E L+ FS+VG V S R+++D+ TGK +G + ++ D E L+A
Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76
Query: 452 KNKQMFLGKKLSI 464
N + F G+ L +
Sbjct: 77 LNGREFSGRALRV 89
>gi|78355840|ref|YP_387289.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
gi|78218245|gb|ABB37594.1| RNP-1 like RNA-binding protein [Desulfovibrio alaskensis G20]
Length = 87
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAVAKNK 454
++ N++ + T +DL F+D G V+S R++ D+ TG+SRG +V+ + A + N
Sbjct: 6 YVGNLSWECTDQDLHALFADFGDVTSARVISDRETGRSRGFGFVEMDANGAAQAIDSLNA 65
Query: 455 QMFLGKKLSIARSNPKQRK 473
F G+ L + + P++R+
Sbjct: 66 SSFQGRNLKVNEAQPRERR 84
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%)
Query: 373 KKQPIKDAVPGRTKGFTDECTAFLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKS 432
+K P+++ V + D T F + + DL FFS VG V +RI+ D+ + +S
Sbjct: 150 EKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRS 209
Query: 433 RGLAYVDFIDDEHLAAAVAKNKQMFLGKKLSIARS 467
+G+AYV+F + + + A+ Q LG + + S
Sbjct: 210 KGIAYVEFCEIQSVPLAIGLTGQWLLGVPIIVQAS 244
>gi|344339676|ref|ZP_08770604.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343800412|gb|EGV18358.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 91
Score = 52.8 bits (125), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 395 FLSNINLKATYEDLRRFFSDVGGVSSIRILHDKFTGKSRGLAYVDFIDDEHLAAAV-AKN 453
++ N+ T +DLR F G +++ ++ DKF+G+S+G +VD ++ AA+ A N
Sbjct: 4 YVGNLTYSVTDDDLRDVFGQYGELAAAEVIKDKFSGQSKGFGFVDMPNNSEADAAIKALN 63
Query: 454 KQMFLGKKLSIARSNPKQRKDSSG 477
+ F G+KL++ + P+ + G
Sbjct: 64 ETDFKGRKLTVNEARPRAERPRGG 87
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,631,457,552
Number of Sequences: 23463169
Number of extensions: 360802888
Number of successful extensions: 1338626
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6468
Number of HSP's successfully gapped in prelim test: 8532
Number of HSP's that attempted gapping in prelim test: 1280042
Number of HSP's gapped (non-prelim): 55783
length of query: 565
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 417
effective length of database: 8,886,646,355
effective search space: 3705731530035
effective search space used: 3705731530035
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)