Your job contains 1 sequence.
>008449
MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM
MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE
ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN
SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK
IVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL
DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKR
QMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVL
KDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEG
FVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGET
ELEAKFEEAVSKIKRDIVFAASLYL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008449
(565 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 2301 1.1e-238 1
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 1360 5.6e-139 1
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 1355 1.9e-138 1
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 1355 1.9e-138 1
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 1343 3.6e-137 1
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 1342 4.6e-137 1
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 1329 1.1e-135 1
UNIPROTKB|F1N993 - symbol:F1N993 "Uncharacterized protein... 1284 6.4e-131 1
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 1160 8.8e-118 1
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 1141 9.1e-116 1
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 1139 1.5e-115 1
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 1117 3.2e-113 1
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 1087 4.8e-110 1
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 1062 2.1e-107 1
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 1018 9.8e-103 1
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 1018 9.8e-103 1
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 988 1.5e-99 1
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 956 3.7e-96 1
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 950 1.6e-95 1
UNIPROTKB|D4AE49 - symbol:D4AE49 "Uncharacterized protein... 694 1.8e-95 2
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 947 3.3e-95 1
RGD|1305984 - symbol:Skiv2l2 "superkiller viralicidic act... 770 1.9e-76 1
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 607 4.4e-58 1
TAIR|locus:2075566 - symbol:AT3G46960 species:3702 "Arabi... 364 7.8e-57 2
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 582 2.2e-55 1
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 396 9.6e-54 2
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 560 4.9e-53 1
UNIPROTKB|F5H6Y7 - symbol:SKIV2L "Helicase SKI2W" species... 553 7.2e-53 1
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 553 1.7e-52 1
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 553 1.7e-52 1
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 553 1.9e-52 1
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 553 1.9e-52 1
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 554 2.2e-52 1
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 553 2.8e-52 1
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 552 3.2e-52 1
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 552 3.5e-52 1
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 552 3.5e-52 1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA... 351 1.3e-49 2
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 512 6.2e-48 1
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 313 5.5e-47 2
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 291 7.8e-47 2
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab... 290 7.1e-40 3
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 414 3.8e-38 1
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 388 2.4e-32 2
UNIPROTKB|Q10701 - symbol:helY "Probable helicase HelY" s... 198 4.8e-19 2
UNIPROTKB|H7C4L3 - symbol:SKIV2L "Helicase SKI2W" species... 212 2.1e-16 1
UNIPROTKB|H0YAC4 - symbol:SKIV2L2 "Superkiller viralicidi... 180 6.0e-13 1
TAIR|locus:2020573 - symbol:EMB25 "EMBRYO DEFECTIVE 25" s... 130 1.1e-08 2
UNIPROTKB|H9L343 - symbol:H9L343 "Uncharacterized protein... 124 6.3e-07 1
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 2301 (815.1 bits), Expect = 1.1e-238, P = 1.1e-238
Identities = 443/565 (78%), Positives = 510/565 (90%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFTNVRKFDGDKFRW+SSGEYIQMSGRAGRRGID+RGICILMVD+KMEP+ AK
Sbjct: 425 MPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKS 484
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
MLKGSADSLNSAFHLSYNMLLNQ+RCEEG PENLLRNSF+QFQAD AIPDLEKQ K LEE
Sbjct: 485 MLKGSADSLNSAFHLSYNMLLNQLRCEEGDPENLLRNSFFQFQADRAIPDLEKQIKSLEE 544
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
ERDS+VIEEE+SLKNYYNL+ QYKSLKKD+R+IVF+PKYCLPFL P R VC++CT D+
Sbjct: 545 ERDSLVIEEEESLKNYYNLILQYKSLKKDIREIVFTPKYCLPFLLPNRAVCLDCTNDDEE 604
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
SFS ED Q TWGV+++F KVK + EDD +++PED+NYTV++LTRC+VSKDG GKK +K
Sbjct: 605 PQSFSIED-QDTWGVIMKFNKVKSLSEDDDSRRPEDANYTVDVLTRCMVSKDGVGKKKVK 663
Query: 241 IVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL 300
VP+KE GEP+VV+VP+SQI LSSA + +PKDL+PL+ REN LK SE L+R+ G+PL
Sbjct: 664 AVPIKERGEPVVVTVPLSQIKSLSSAIMNIPKDLVPLEARENALKKVSELLSRHPDGIPL 723
Query: 301 DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKR 360
DPE +M I+SSSY+K VRR+EALE+LF+KH+I+KSPLI +KLKVL MK+EL AKIKS+K+
Sbjct: 724 DPEVDMKIKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLKK 783
Query: 361 QMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVL 420
+RSST LAFKDELKARKRVLRRLGY TSD+VVELKGKVACEISSAEELTLTEL+F+G+
Sbjct: 784 TVRSSTALAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIF 843
Query: 421 KDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEG 480
KD KVEE+VSLLSCFVW+E+L DA+KPREEL+LLF QLQDTARRVA+VQL+CKV+IDVE
Sbjct: 844 KDAKVEELVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVES 903
Query: 481 FVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGET 540
FV SFRPDIMEAVYAWAKGSKFYE+MEI VFEGSLIRAIRR+EEVLQQLI+AAKSIGET
Sbjct: 904 FVQSFRPDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGET 963
Query: 541 ELEAKFEEAVSKIKRDIVFAASLYL 565
+LEAK EEAVSKIKRDIVFAASLYL
Sbjct: 964 QLEAKLEEAVSKIKRDIVFAASLYL 988
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 1360 (483.8 bits), Expect = 5.6e-139, P = 5.6e-139
Identities = 285/569 (50%), Positives = 378/569 (66%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RKFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 491 MPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 550
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ K EE
Sbjct: 551 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 610
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+S+ YY + QQ L K++ + V PKYCLPFLQPGR V ++ GDD
Sbjct: 611 QYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYVHKPKYCLPFLQPGRLVKVK-NEGDD- 668
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
F WGVV+ F K V N D Y V +L RC SK+ +
Sbjct: 669 ---FG-------WGVVVNFSKKSNV---KPNSGELDPLYVVEVLLRC--SKESLKNSATE 713
Query: 241 IV-PLK--ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
P K E GE VV V + + +SS RL +PKDL P+ R+++LKS E R G
Sbjct: 714 AAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDG 773
Query: 298 LPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
+PL DP +MGI+ +K+++++EA E H + P +E + K ++ IK
Sbjct: 774 VPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIK 833
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
S KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++F
Sbjct: 834 SAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMF 893
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
NG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++I
Sbjct: 894 NGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEI 953
Query: 477 DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKS 536
D E ++NSF+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+
Sbjct: 954 DEETYLNSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKA 1013
Query: 537 IGETELEAKFEEAVSKIKRDIVFAASLYL 565
IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 1014 IGNTELENKFAEGITKIKRDIVFAASLYL 1042
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
Identities = 283/569 (49%), Positives = 378/569 (66%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RKFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 390 MPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 449
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ K EE
Sbjct: 450 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 509
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+S+ YY + QQ L K++ + + PKYCLPFLQPGR V ++ GDD
Sbjct: 510 QYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDD- 567
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
F WGVV+ F K V N D Y V +L RC SK+ +
Sbjct: 568 ---FG-------WGVVVNFSKKSNV---KPNSGELDPLYVVEVLLRC--SKESLKNSATE 612
Query: 241 IV-PLK--ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
P K E GE VV V + + +SS RL +PKDL P+ R+++LKS E R G
Sbjct: 613 AAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDG 672
Query: 298 LPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
+PL DP +MGI+ +K+++++EA E H + P +E + K ++ IK
Sbjct: 673 IPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIK 732
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
S KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++F
Sbjct: 733 SAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMF 792
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
NG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++I
Sbjct: 793 NGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEI 852
Query: 477 DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKS 536
D E +++SF+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+
Sbjct: 853 DEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKA 912
Query: 537 IGETELEAKFEEAVSKIKRDIVFAASLYL 565
IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 913 IGNTELENKFAEGITKIKRDIVFAASLYL 941
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
Identities = 283/569 (49%), Positives = 378/569 (66%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RKFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 491 MPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 550
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ K EE
Sbjct: 551 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 610
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+S+ YY + QQ L K++ + + PKYCLPFLQPGR V ++ GDD
Sbjct: 611 QYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDD- 668
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
F WGVV+ F K V N D Y V +L RC SK+ +
Sbjct: 669 ---FG-------WGVVVNFSKKSNV---KPNSGELDPLYVVEVLLRC--SKESLKNSATE 713
Query: 241 IV-PLK--ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
P K E GE VV V + + +SS RL +PKDL P+ R+++LKS E R G
Sbjct: 714 AAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDG 773
Query: 298 LPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
+PL DP +MGI+ +K+++++EA E H + P +E + K ++ IK
Sbjct: 774 IPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIK 833
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
S KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++F
Sbjct: 834 SAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMF 893
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
NG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++I
Sbjct: 894 NGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEI 953
Query: 477 DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKS 536
D E +++SF+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+
Sbjct: 954 DEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKA 1013
Query: 537 IGETELEAKFEEAVSKIKRDIVFAASLYL 565
IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 1014 IGNTELENKFAEGITKIKRDIVFAASLYL 1042
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 280/569 (49%), Positives = 378/569 (66%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RK+DG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 489 MPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 548
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ K EE
Sbjct: 549 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 608
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+++ YY + QQ L K++ + + PKYCLPFLQPGR V ++ GDD
Sbjct: 609 QYNKIVIPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDD- 666
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
F WGVV+ F K V N D Y V +L RC SK+ +
Sbjct: 667 ---FG-------WGVVVNFSKKSNV---KPNSGELDPLYVVEVLLRC--SKESLKNSATE 711
Query: 241 IV-PLK--ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
P K E GE VV V + + +S+ RL +PKDL P+ R+++LKS E R G
Sbjct: 712 AAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQRRFPDG 771
Query: 298 LPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
+PL DP +MGI+ +K+++++EA E H + P +E + K ++ IK
Sbjct: 772 VPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQIALDIK 831
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
S KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++F
Sbjct: 832 SAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMF 891
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
NG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++I
Sbjct: 892 NGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEI 951
Query: 477 DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKS 536
D E +++SF+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+
Sbjct: 952 DEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKA 1011
Query: 537 IGETELEAKFEEAVSKIKRDIVFAASLYL 565
IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 1012 IGNTELENKFAEGITKIKRDIVFAASLYL 1040
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 1342 (477.5 bits), Expect = 4.6e-137, P = 4.6e-137
Identities = 282/570 (49%), Positives = 376/570 (65%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RKFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 492 MPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 551
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ K EE
Sbjct: 552 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 611
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+S+ YY + QQ L K++ + + PKYCLPFLQPGR V ++ GDD
Sbjct: 612 QYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDD- 669
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVV-SKDGAGKKTL 239
F WGVV+ F K V N D Y V +L RC S + +
Sbjct: 670 ---FG-------WGVVVNFSKKSNV---KPNSGELDPLYVVEVLLRCSKESLKNSATEAA 716
Query: 240 KIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP 299
K E GE VV V + + +SS RL +PKDL PL R+++LKS E R G+P
Sbjct: 717 KPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVP 776
Query: 300 L-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSI 358
L DP +MGI+ +K+++++EA E H + P +E + K ++ IKS
Sbjct: 777 LLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSA 836
Query: 359 KRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEIS---SAEELTLTELI 415
KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEIS SA+EL LTE++
Sbjct: 837 KRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMM 896
Query: 416 FNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQ 475
FNG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++
Sbjct: 897 FNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLE 956
Query: 476 IDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAK 535
ID E +++SF+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK
Sbjct: 957 IDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAK 1016
Query: 536 SIGETELEAKFEEAVSKIKRDIVFAASLYL 565
+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 1017 AIGNTELENKFAEGITKIKRDIVFAASLYL 1046
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 275/569 (48%), Positives = 373/569 (65%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FT+ RKFDG FRWISSGEYIQMSGRAGRRG+DERGI I MVD+KM P+ K
Sbjct: 484 MPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAGRRGMDERGIVIFMVDEKMSPAVGKQ 543
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ A+P + + K LEE
Sbjct: 544 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAVPGVVDRMKKLEE 603
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
E +++ I +E+S+ YY + QQ L K++ + + P+YCLPFLQPGR V ++
Sbjct: 604 EYNAIRIPKEESVVTYYKIRQQLAKLGKEIEEFIHKPRYCLPFLQPGRLVKVK------- 656
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDG---AGKK 237
ED WGVV+ F+K V D + V +L C SKD A +
Sbjct: 657 -----KEDLDFGWGVVVNFQKKSNVKAGG----DLDPLFVVEVLVHC--SKDSVKNAATE 705
Query: 238 TLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
+ + E GE VV V + I +SS RL +PKDL P R++MLKS E R G
Sbjct: 706 SARPAGPAEKGEMQVVPVILHLITSISSVRLYIPKDLRPYDNRQSMLKSIQEVQKRFPDG 765
Query: 298 LPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
+PL DP +MGI+ + +K+++++EA E H + P +E K+ K + IK
Sbjct: 766 IPLLDPIDDMGIKDPALKKVIQKVEAFEHRMYTHPLHSDPNLEAVYKLCEKKALIAGDIK 825
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
+ KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACE SS +EL LTE++F
Sbjct: 826 AAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACETSSGDELLLTEMMF 885
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
NG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K+++
Sbjct: 886 NGLFNDLTAEQATALLSCFVFQENANEMPKLTEQLGGPLRQMQECAKRIAKVSAEAKLEV 945
Query: 477 DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKS 536
D + ++N FRP +M+ VY WA GS F +I ++T VFEGS+IR +RRLEE+L+Q+ AAK+
Sbjct: 946 DEDSYLNQFRPHLMDVVYTWANGSSFSQICKMTDVFEGSIIRCMRRLEELLRQMCQAAKA 1005
Query: 537 IGETELEAKFEEAVSKIKRDIVFAASLYL 565
IG TELE KF ++KIKRDIVFAASLYL
Sbjct: 1006 IGNTELENKFATGITKIKRDIVFAASLYL 1034
>UNIPROTKB|F1N993 [details] [associations]
symbol:F1N993 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000178 "exosome (RNase
complex)" evidence=IEA] [GO:0000460 "maturation of 5.8S rRNA"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0000178 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000460
GO:GO:0008026 GeneTree:ENSGT00690000102230 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 EMBL:AADN02054537 EMBL:AADN02054530
EMBL:AADN02054531 EMBL:AADN02054532 EMBL:AADN02054533
EMBL:AADN02054534 EMBL:AADN02054535 EMBL:AADN02054536
IPI:IPI00599020 Ensembl:ENSGALT00000023719 Uniprot:F1N993
Length = 1031
Score = 1284 (457.0 bits), Expect = 6.4e-131, P = 6.4e-131
Identities = 265/567 (46%), Positives = 365/567 (64%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FT+ KFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 480 MPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 539
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ LEE
Sbjct: 540 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVNKLEE 599
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+++ YY + QQ L K++ + + PKYCLPFLQPGR V ++
Sbjct: 600 QYNKIVIPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK------- 652
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVV-SKDGAGKKTL 239
ED WGVV+ F K V N D Y V +L C S + +
Sbjct: 653 -----NEDDDFGWGVVVNFSKKSNV---KPNSGELDPLYVVEVLLHCSKESLKNSATEAA 704
Query: 240 KIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP 299
K E GE VV V + + +SS RL +PKDL P+ R+++LKS E R G+P
Sbjct: 705 KPARPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPIDNRQSVLKSIQEVQKRFPDGVP 764
Query: 300 L-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSI 358
L DP +MGI+ +K+++++EA E H + P +E K+ K ++ IK+
Sbjct: 765 LLDPIDDMGIKDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETIYKLCERKAQIAMDIKAA 824
Query: 359 KRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNG 418
KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++FNG
Sbjct: 825 KRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNG 884
Query: 419 VLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDV 478
+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+A+V E K++ID
Sbjct: 885 LFNDLSAEQATALLSCFVFQENSNEMPKLTEQLAGPLRQMQECAKRIARVSAEAKLEIDE 944
Query: 479 EGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIG 538
E ++NSFRP++M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG
Sbjct: 945 ENYLNSFRPNLMDVVYTWANGASFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIG 1004
Query: 539 ETELEAKFEEAVSKIKRDIVFAASLYL 565
TELE KF E + R + F + L +
Sbjct: 1005 NTELENKFAEGRTYKSRPVSFHSGLQI 1031
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 244/568 (42%), Positives = 357/568 (62%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FT RKFDG KFRWISSGEYIQM+GRAGRRG+D++GI ILM+D+K+ P+ +
Sbjct: 507 MPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRD 566
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+++G AD +NSAFHL+YNM+LN +R EE +PE +L SFYQFQ A+P L Q +
Sbjct: 567 IVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQAALPGLHDQVEQKTL 626
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
E + + I++E ++ +Y+++ Q K R + P+Y LPFLQPGR V +
Sbjct: 627 ELNKLTIKDEHNIASYHHIRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAA------ 680
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
++++ WG+V+ F+K +D + K P + +V I VS+ A KT
Sbjct: 681 ----GSQEYD--WGIVLNFKK-----QDQSRKNPLKAEPSVTIDVLLHVSE--AAAKTGD 727
Query: 241 IVPLKESGEPLVVSVPISQ--IIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGL 298
P K + + VP++ I ++SS R+ P DL R +LK+ E R G
Sbjct: 728 TEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTIQEAKKRFPLGP 787
Query: 299 P-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKS 357
P L+P +M I+ ++ +V I E ++H + KSP +E+ + K L +++
Sbjct: 788 PVLNPIDDMNIKDREFRDIVNTISQFEKRLEEHPLHKSPELERIHRRYQDKVTLQKQLQD 847
Query: 358 IKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFN 417
+K +++++ L DELK RKRVLRR+GY DV+E KG+VACE+SSA+EL +TE+IFN
Sbjct: 848 LKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLMTEMIFN 907
Query: 418 GVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQID 477
GV D+ + V+LLSCFV EK ++ K EL +QD ARR+AKV ECK+ +D
Sbjct: 908 GVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGPLRSMQDLARRIAKVSTECKLDLD 967
Query: 478 VEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSI 537
+ +V+ F+P +M+ V AW KGS F + ++T +FEGS+IR +RRLEE+L+Q+ A+K+I
Sbjct: 968 ADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQMCQASKTI 1027
Query: 538 GETELEAKFEEAVSKIKRDIVFAASLYL 565
G T+LE KF E + +KRDIVFAASLYL
Sbjct: 1028 GNTDLENKFSEGIRLLKRDIVFAASLYL 1055
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
Identities = 255/573 (44%), Positives = 360/573 (62%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFTNVRKFDG FRWIS GEYIQMSGRAGRRG+D+RGI ILM+D+KM+P AK
Sbjct: 559 MPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIVILMIDEKMDPPVAKS 618
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
MLKG AD L+SAFHLSYNM+LN +R E SPE +L F+QFQ +P LE + + ++
Sbjct: 619 MLKGEADRLDSAFHLSYNMILNLLRVEGISPEFMLERCFFQFQNSLEVPKLEAKLEESQQ 678
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
DS I +E L+ Y+ L Q + + DVR +V P +CL FLQ GR V ++ G+
Sbjct: 679 HYDSFTILDERPLEEYHTLKTQLERYRTDVRTVVNHPNFCLSFLQGGRLVRVKV--GN-- 734
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
ED WGVV+ K + + + +N+ +Y V+ L V S G +
Sbjct: 735 ------EDFD--WGVVVNVSK-RPLPKGQSNEYLPQESYIVHTLVM-VASDTGPLRIRSG 784
Query: 241 IVP------LKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARN 294
+P ++ G+ VV +S + ++ R+ +P DL + + K+ SE R
Sbjct: 785 HLPEVHPPAAEDKGKFEVVPFLLSSLDGIAHIRVFLPNDLKSQGQKLTVGKALSEVKRRF 844
Query: 295 ASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTA 353
G+ L DP NM I+ ++ KL++++ LES + + +E+K K L
Sbjct: 845 PEGITLLDPVENMNIKEPTFIKLMKKVNILESRLLSNPLHNFSELEEKYAEYLRKLALLE 904
Query: 354 KIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTE 413
++K +K+++ + + DEL +RKRVLRRLG+ TSDDV+E+KG+VACEISS + L LTE
Sbjct: 905 EVKDLKKKLSKARSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLLTE 964
Query: 414 LIFNGVLKDVKVEEMVSLLSCFVWQEKLQ-DASKPREELELLFTQLQDTARRVAKVQLEC 472
LIFNG+ D+ E+ +LLSC V+QEK + + + +EEL LQ+ ARR+AKV E
Sbjct: 965 LIFNGMFNDLTPEQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSKES 1024
Query: 473 KVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLIL 532
K +++ E +VNSF+P +ME VYAWA G+ F +I ++T V+EGSLIR RRLEE+++Q++
Sbjct: 1025 KQELNEEEYVNSFKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQMVD 1084
Query: 533 AAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
AAK IG T L+ K E+ ++ I RDIVF+ASLYL
Sbjct: 1085 AAKVIGNTSLQQKMEDTIACIHRDIVFSASLYL 1117
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 246/579 (42%), Positives = 365/579 (63%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTV+FT+VRKFDG+ RWIS GEYIQMSGRAGRRG+DERGI ILMVD+KMEP+ AK
Sbjct: 564 MPAKTVIFTSVRKFDGEGMRWISGGEYIQMSGRAGRRGLDERGIVILMVDEKMEPAIAKG 623
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
M+KG AD L S+F + Y+MLLN +R E+ PENLL+ SF+Q+Q + IP L + +E+
Sbjct: 624 MVKGQADRLTSSFWIGYSMLLNMLRVEDIDPENLLKRSFHQYQQESFIPQLVDKCDQMEQ 683
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
E+ ++I +E S+ Y ++ Q L++ +RD + P Y PFL GR V I +
Sbjct: 684 EKKEIIIRDETSVTEYSSIKAQLAKLREAMRDFINQPTYVQPFLTAGRIVRIR-----EG 738
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKD----GAGK 236
S + +GV++ F K + + + + +IL C +S D G
Sbjct: 739 STDWG-------YGVILNFSK-RPIKSSGSGVSDKSFEVIADILLECAISSDPTSNGGYI 790
Query: 237 KTLK-IVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLAR-- 293
T K VP E GE ++ V I ++S L + K+ + + ++ K+ E R
Sbjct: 791 GTPKPCVP-GEVGEGQIIPVSIKLFDGITSVCLYVKKEQPTQEFKTHLFKTLKETENRFK 849
Query: 294 NASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELT 352
G+PL DP +M I+ +++KL+++IE LES F IE++ +L K E+T
Sbjct: 850 KDGGIPLIDPIEDMKIKDPNFKKLIKKIETLESRFSSTACFNDTDIEERCNLLEKKNEIT 909
Query: 353 AKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLT 412
+IK +++Q++S E+ KD+L++ KR+L RLGY T D VV LKG+VACEIS+ +EL ++
Sbjct: 910 KEIKQLQKQIKSGDEVILKDDLRSMKRILTRLGYITDDGVVALKGRVACEISAGDELVIS 969
Query: 413 ELIFNGVLKDVKVEEMVSLLSCFVWQEK---LQDASKPREELEL--LFTQLQDTARRVAK 467
EL+F G+ D+ VE+ V++ SCFV+Q + D + P+ + +L L+ ++DTA +V
Sbjct: 970 ELLFAGLFNDLSVEQCVAVFSCFVFQNEGSANNDVNNPKIKPDLVPLYRVIRDTASKVVT 1029
Query: 468 VQLECKV-QIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEV 526
V ECK+ +D + ++ SF P+ M+ +AWA G+ F +I+++T FEG+LIR IRRL+E+
Sbjct: 1030 VSQECKLTSVDEKTYLASFNPNFMDVTFAWASGASFADIVKMTDTFEGNLIRGIRRLDEL 1089
Query: 527 LQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
++Q+++A+KSIG TELEAKF EA KIKRDI FA SLYL
Sbjct: 1090 IRQMVIASKSIGNTELEAKFSEATVKIKRDIPFAGSLYL 1128
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 243/575 (42%), Positives = 359/575 (62%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFT+VRK+DG +FRW+S GEYIQMSGRAGRRG+D+RGI I+M+D+KMEP AK
Sbjct: 511 MPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKG 570
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
M+KG AD L+SAFHL YNM+LN +R E SPE +L +SF+QFQ ++P +EK+ L++
Sbjct: 571 MVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQNVISVPVMEKKLAELKK 630
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ D + +E+E+++K Y+ + Q K ++DVR +V P L FLQPGR V I G DN
Sbjct: 631 DFDGIEVEDEENVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEIS-VNGKDN 689
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNIL--TRCVVSKDGAGKK- 237
WG V++F K A +S Y VN++ T + S K
Sbjct: 690 ----------YGWGAVVDFAKRINKRNPSAVYTDHES-YIVNVVVNTMYIDSPVNLLKPF 738
Query: 238 --TLK--IVPLKESGEPLVVSVPIS--QIIKLSSARLPMPKDLLPLQTRENMLKSTSEFL 291
TL I P +E + + +PI+ I + + RL MPKD+ +E + KS E
Sbjct: 739 NPTLPEGIRPAEEGEKSICAVIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVN 798
Query: 292 ARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQE 350
R G+P LDP NM I + KL+++I+ L + + ++ S +E+ K +
Sbjct: 799 RRFPDGIPVLDPVKNMKIEDEDFLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHD 858
Query: 351 LTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELT 410
L +K +KR++ S + D+L+ RKRVLRRLG+ T +D++ELKG+VACEISS +EL
Sbjct: 859 LHEDMKQLKRKISESQAVIQLDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELL 918
Query: 411 LTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQL 470
LTELIFNG ++K E+ +LLSCF +QE+ ++A + + EL +++ A ++AK+
Sbjct: 919 LTELIFNGNFNELKPEQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMK 978
Query: 471 ECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQL 530
+ K+++ + +V SFR ++ME VY W +G+ F +I ++T V+EGSLIR +RLEE++++L
Sbjct: 979 DSKIEVVEKDYVESFRHELMEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKEL 1038
Query: 531 ILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
+ A +IG + L+ K E + I RDIV A SLYL
Sbjct: 1039 VDVANTIGNSSLKEKMEAVLKLIHRDIVSAGSLYL 1073
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 238/574 (41%), Positives = 352/574 (61%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFT+VRKFDG RW++ E++QMSGRAGRRG+D+RGI I+M+ ++M+P+ AK
Sbjct: 515 MPAKTVVFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMIGEEMDPAVAKE 574
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+++G D LNSAFHL YNM+LN +R E SPE +L FYQFQ + LEK+ LEE
Sbjct: 575 IVRGEQDRLNSAFHLGYNMILNLMRVEGISPEFMLERCFYQFQNTAGLAGLEKELAELEE 634
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+R +M I +E +++ YY++ Q DVR ++ P+Y +PFL PGR + I+
Sbjct: 635 KRANMTISDEGTIREYYDIRTQIDQFNDDVRAVISHPEYSVPFLTPGRLLHIKY------ 688
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
+D WGVV+ +K K + ++ + ++Y V++L R V +G KT +
Sbjct: 689 ------KDFDFGWGVVVNIKKRKP--QKNSEELTGHASYIVDVLLR-VADGSSSGTKTFE 739
Query: 241 -----IVPLKESGEPLVVSVPI--SQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLAR 293
+ P KE + + VP+ + I +S R+ +PKDL +R +M K + R
Sbjct: 740 DLPQGVRPPKEGEKSQMEVVPLLLNCIQAISHVRMIVPKDLQSKDSRTDMGKKVEQIKKR 799
Query: 294 NASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELT 352
G+ LDP +MGI+ ++K +R+IE LES + + SP +E+ + K +L
Sbjct: 800 FPDGIAVLDPIEDMGIKDDEFKKTLRKIEVLESRLVTNPLHNSPRLEELYEQYAEKLDLG 859
Query: 353 AKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLT 412
KIK+ K+++ + DELK RKRVLRR G+ +VV+LK +VACEIS+ +EL L+
Sbjct: 860 NKIKATKKKISEGMAIQQLDELKCRKRVLRRFGFINEAEVVQLKARVACEISTGDELMLS 919
Query: 413 ELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASK-PREELELLFTQLQDTARRVAKVQLE 471
EL+FNG + E+ ++LS FV++EK ++ +EEL ++Q AR +AKV E
Sbjct: 920 ELLFNGFFNKLTPEQAAAVLSVFVFEEKTKETPPLSKEELAKPLKEIQAQARIIAKVAQE 979
Query: 472 CKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLI 531
K+ + E +V SF ++ME +Y WA G F +I +T V+EGSLIR RRLEE L+Q+
Sbjct: 980 SKLAVSEEDYVQSFHWELMEVIYEWANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMA 1039
Query: 532 LAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
AAK +G ELE+KFE A++K++RDIV A SLYL
Sbjct: 1040 QAAKVMGSEELESKFETALTKVRRDIVAAQSLYL 1073
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 240/579 (41%), Positives = 356/579 (61%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVF+ V+KFDG K R ++ EYIQMSGRAGRRG+D+RGI I+M+DDK++P TAK
Sbjct: 538 MPAKTVVFSQVKKFDGVKERPLTPSEYIQMSGRAGRRGLDDRGIVIMMIDDKLDPETAKG 597
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
M+ G D LNSAFHL YNM+LN R E SP+ +L FYQFQ ++P LEK+ L++
Sbjct: 598 MVCGQQDRLNSAFHLGYNMILNLQRIETVSPQYMLERCFYQFQNASSVPALEKKLIELQQ 657
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+RD+MVI +E ++K+Y+ + QQ ++ KKD+ ++ P CL F+QPGR + I+ G D
Sbjct: 658 QRDAMVIPDESTVKDYHTVRQQIEAYKKDMEAVIQHPNNCLEFMQPGRLIRIKTPDGVD- 716
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILT-----------RCVV 229
F WGVV+ F K V + P++S Y +++ V
Sbjct: 717 ---FD-------WGVVVNFLPRKPVKFGEEEPPPQES-YLMDVALFVSEDSISPPPHASV 765
Query: 230 SKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSE 289
SK+G ++ + G VV ++ ++ +S R+ MPKD+ L + + E
Sbjct: 766 SKEGHIADGVEPSGSVDHGRLEVVPCLLTCMVAISQIRIFMPKDMDHLG-KSQVSHGLEE 824
Query: 290 FLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMK 348
R G+P LDP NMGI+ S++KL+R+IE LES + + SP + + +K
Sbjct: 825 VQRRFPDGVPILDPIENMGIKDDSFKKLMRKIEVLESRLLSNPLHGSPNLPELWDKYKIK 884
Query: 349 QELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAE- 407
ELT++IK KR + S +A DELK+R RVLRRL + ++VV++K +VACEISS E
Sbjct: 885 TELTSQIKETKRAINKSYSIAQLDELKSRMRVLRRLNFINENEVVQMKARVACEISSTEG 944
Query: 408 -ELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVA 466
EL ++EL+FNG +++ E ++LSCFV+ EK++ + +E+L+ L ++ A+ +A
Sbjct: 945 HELVISELLFNGFFNELEPEVCAAILSCFVFDEKME-GTPLKEDLDKLVREIHAQAKTIA 1003
Query: 467 KVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEV 526
++ E K+ + E V + + + E V AWAKG F EI ++T +EGSL+R +RRLEE+
Sbjct: 1004 RISRESKLDVSDEQVVGNLKWQLTETVLAWAKGRPFAEICKMTNAYEGSLVRIMRRLEEL 1063
Query: 527 LQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
L+Q+ A K +G L+ KFE+A+S I RD+V AASLYL
Sbjct: 1064 LRQMAEAGKVMGSEMLQKKFEKALSLISRDVVSAASLYL 1102
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 220/464 (47%), Positives = 292/464 (62%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RKFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 489 MPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 548
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP + ++ K EE
Sbjct: 549 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 608
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ + +VI E+S+ YY + QQ L K++ + + PKYCLPFLQPGR V ++ GDD
Sbjct: 609 QYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVK-NEGDD- 666
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVV-SKDGAGKKTL 239
F WGVV+ F K V N D Y V +L RC S + +
Sbjct: 667 ---FG-------WGVVVNFSKKSNV---KPNSGELDPLYVVEVLLRCSKESLKNSATEAA 713
Query: 240 KIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLP 299
K E GE VV V + + +SS RL +PKDL PL R+++LKS E R G+P
Sbjct: 714 KPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVP 773
Query: 300 L-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSI 358
L DP +MGI+ +K+++++EA E H + P +E + K ++ IKS
Sbjct: 774 LLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSA 833
Query: 359 KRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEIS---SAEELTLTELI 415
KR+++ + + DELK RKRVLRRLG+ATS DV+E+KG+VACEIS SA+EL LTE++
Sbjct: 834 KRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISRWYSADELLLTEMM 893
Query: 416 FNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQ 459
FNG+ D+ E+ +LLSCFV+QE + K E+L Q+Q
Sbjct: 894 FNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQ 937
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 233/570 (40%), Positives = 337/570 (59%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFT V+K+DGD R+I SGEYIQMSGRAGRRG DERGICI+M+D++ME +T +
Sbjct: 441 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMNTLRD 500
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEG--SPENLLRNSFYQFQADHAIPDLEKQAKVL 118
M+ G L S F LSY +LN + EG + E+++R+SF+QFQ + A+PD+ + L
Sbjct: 501 MMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQFQHEKALPDIGNKVSKL 560
Query: 119 EEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGD 178
EEE + E + Y+NL +K + + P+ L FL GR V I G
Sbjct: 561 EEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPERVLCFLDTGRLVKIR-EGGT 619
Query: 179 DNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKT 238
D WGVV+ K V A+ Y V+ L C G K
Sbjct: 620 DWG-----------WGVVVNVVKNSSVGTGSASS--HGGGYIVDTLLHCSTGFSENGAKP 666
Query: 239 LKIVPLK-ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
P E GE VV V + I LS R+ +P DL P++ R+++L + E +R G
Sbjct: 667 KPCPPRAGEKGEMHVVPVQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFPLG 726
Query: 298 LP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
P L P +M I+ + LV +IE +E H + KS +Q++K K E+ +I+
Sbjct: 727 FPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSE-DDQQIKSFQRKAEVNYEIQ 785
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
+K +MR S F+DELK R RVL++LG+ +D VV++KG+ AC I + +EL +TEL+F
Sbjct: 786 QLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELMF 845
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
NG D+ ++ +L SCF+ +K + R EL QLQD+AR++A++Q ECK++I
Sbjct: 846 NGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLEI 905
Query: 477 DVEGFVNS-FRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAK 535
DVE +V S RP +M+ +Y+W+KG+ F EI+++T +FEGS+IR+ RRL+E L QL AA+
Sbjct: 906 DVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAAE 965
Query: 536 SIGETELEAKFEEAVSKIKRDIVFAASLYL 565
++GE+ LE+KF A ++R I+FA SLYL
Sbjct: 966 AVGESSLESKFAAASESLRRGIMFANSLYL 995
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 219/575 (38%), Positives = 351/575 (61%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFT+VRK+DG FRW+S GEYIQMSGRAGRRG+D+RGI I+M+D+KMEP AK
Sbjct: 547 MPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKG 606
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
M+KG AD L+SAFHL YNM+LN +R E SPE +L +SF+QFQ ++P LE + ++
Sbjct: 607 MVKGQADRLDSAFHLGYNMILNLMRVEGISPEFMLEHSFFQFQKASSVPILEGKLAQCKQ 666
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
E + IE+E +K+YY+L QQ +DVR ++ P LPFLQ GR + ++ GD
Sbjct: 667 EFADITIEDEPIIKDYYDLKQQLLKYNEDVRKVITHPGNILPFLQDGRVIKVKI--GD-- 722
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNIL--TRCVVSKDGAGKKT 238
D+ WG+V F K ++++ P D+ Y V + T + S KK
Sbjct: 723 ------LDYG--WGMVTTFTKRNRRHQEEF--APHDA-YVVEVFITTMFIDSPVNLIKKF 771
Query: 239 LKIVP--LK--ESGEPL---VVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFL 291
++P ++ +SGE +S+ +S I K+S+ RL +P D + ++K+ +
Sbjct: 772 NPMLPEGIRPAKSGEQTRAEFISITLSSIEKISTVRLRVPDDYKSSTAKRTLVKTLKDLP 831
Query: 292 ARNASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQE 350
R G+PL DP +M I ++KL+++I+ L+S + ++ S ++ K +
Sbjct: 832 KRLPDGIPLIDPVQSMKITDDDFKKLLQKIDILDSKIVSNPLNNSARLDDLYAKYTAKVD 891
Query: 351 LTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELT 410
L +IK ++ Q+ + + D+L KRVL++L + S++VVELKG+VA E+S+ +EL
Sbjct: 892 LNNQIKKLEEQIFQAKSIIQLDQLSNMKRVLKKLEFTGSEEVVELKGRVAAELSTGDELM 951
Query: 411 LTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQL 470
+TEL+F+G ++ +++ LLS F++QE+ ++ K + EL + +TA ++AK+
Sbjct: 952 ITELLFSGFFNELTPQQICGLLSAFIFQERAKELPKLKPELAEPAKVIHETANKIAKISK 1011
Query: 471 ECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQL 530
+ ++I + ++ F ++E V+ W+ G+ F I ++T ++EGS+IRA+RR E+++QL
Sbjct: 1012 QSGLEIVEKDYIEQFNLALVEVVFVWSNGASFSSICKMTDIYEGSIIRALRREIELIKQL 1071
Query: 531 ILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
+ A+K IG EL KFE+ + I RD V +SLY+
Sbjct: 1072 VDASKIIGNQELVDKFEKCIELINRDFVQVSSLYM 1106
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 232/573 (40%), Positives = 335/573 (58%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RK+DG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 491 MPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 550
Query: 61 MLK-GSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQAD-HAI-PDLEKQAKV 117
+LK G D L++AF+L Y LL + E E+L F QF A+ P L + K
Sbjct: 551 LLKKGQGDKLSAAFYLVYVHLLGALFLNEIDKEHLHLKPFTQFVLPFRAVWPALTNKVKN 610
Query: 118 LEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRG 177
E + + + + +Y +Q K KK + V+ K P+ F+ R
Sbjct: 611 KVERFNFVGVMNRPHMP-WYTSTKQ-KMNKKGKQPKVYIKKN--PY-----FIR---RRE 658
Query: 178 DDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKK 237
+++ G V E+ Y ++ + D Y V +L RC SK+
Sbjct: 659 NEHEVRIREVGRSRESGRV-RGERKWSKYSPNSGEL--DPLYVVEVLLRC--SKESLKNS 713
Query: 238 TLKIV-PLK--ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARN 294
+ P K E GE VV V + + +S+ RL +PKDL P+ R+++LKS E R
Sbjct: 714 ATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQKRF 773
Query: 295 ASGLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTA 353
G+PL DP +MGI+ +K+++++EA E H + P +E + K ++
Sbjct: 774 PDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAI 833
Query: 354 KIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI-SSAEELTLT 412
IKS KR+++ + + DELK RK R+L + + D +LK +V+ + SSA+EL LT
Sbjct: 834 DIKSAKRELKKARTVLQMDELKCRKPCTRKLIFKITSDEKQLKHRVSLTVHSSADELLLT 893
Query: 413 ELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLEC 472
E++FNG+ D+ E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E
Sbjct: 894 EMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEA 953
Query: 473 KVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLIL 532
K++ID E +++SF+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+
Sbjct: 954 KLEIDEETYLSSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQ 1013
Query: 533 AAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
AAK+IG TELE KF E ++KIKRDIVFAASLYL
Sbjct: 1014 AAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1046
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 223/569 (39%), Positives = 340/569 (59%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVFT+ RKFDG R+I+SGEYIQM+GRAGRRG D+RG ILMVD M AK
Sbjct: 478 MPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADDAKQ 537
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
++KG+ D LNS F L+YNM+LN +R E + ++ NSF+QFQ+ IP+++K+ +E
Sbjct: 538 IIKGATDPLNSQFRLTYNMVLNLMRVEGMAVSWIINNSFHQFQSYAKIPEIDKKCVQVER 597
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
+ S E+ ++ +L Q ++ ++ + I PKY + FL GR ++ GD
Sbjct: 598 KIASFNFPWENEMRTLVDLQDQLEATRQRIIQIQREPKYIVGFLHAGRLFKVKS--GD-- 653
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKDGAGKKTLK 240
D + WG++ +F+K + DD N + + + I T D TL
Sbjct: 654 ------RDFK--WGILNQFKKEQN--PDDRNDQIYLCDMMIAINTEGRF--DPTNPATLV 701
Query: 241 IVPLKESGEPLVVSVPISQIIKLSSARLPMPKDL-LPL-QTR-ENMLKSTSEFLARNASG 297
+ V + I +I +S+ RL +P D+ P Q R + M+ + ++ R +
Sbjct: 702 PGFDLPKRRWIRVPMTIDRITAISAVRLKVPADIDKPDGQMRLDGMMAAATK---RFGNQ 758
Query: 298 LPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIK 356
+PL DP +M I++ ++L+ R ++LE + H ++K ++ K KQ+ ++
Sbjct: 759 IPLLDPIQDMEIKTVEMKELIAREKSLEGRLETHSMTKRDNMKDLKKQFEQKQDAVKELN 818
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
++K + +S +EL RKRVLRRLGY +DD + LKG VACE+S+++EL LTE++
Sbjct: 819 ALKAERKSVQSTLHLEELNNRKRVLRRLGYLGNDDALVLKGSVACELSASDELILTEMLL 878
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
G+ + V + +LLSCFV+Q+K A K EL+ ++L + AR VAKV ECK+++
Sbjct: 879 KGIFNTLDVAQTAALLSCFVFQDKCA-APKLATELQTCLSELHEQARNVAKVSNECKMEV 937
Query: 477 DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKS 536
+ +V+SF P +M+ VY W G+ F EI++ T VFEGS+IR +RRLEEVL+++I AAK+
Sbjct: 938 MEDKYVSSFNPGLMDVVYQWVNGATFSEIVKTTDVFEGSIIRTLRRLEEVLREMINAAKA 997
Query: 537 IGETELEAKFEEAVSKIKRDIVFAASLYL 565
+ ELE KFE+A +KRDIVFAASLYL
Sbjct: 998 LANKELEQKFEDARKNLKRDIVFAASLYL 1026
>UNIPROTKB|D4AE49 [details] [associations]
symbol:D4AE49 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
ArrayExpress:D4AE49 Uniprot:D4AE49
Length = 764
Score = 694 (249.4 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 154/362 (42%), Positives = 220/362 (60%)
Query: 208 DDANKKPEDSNYTVNILTRCVVSKDGAGKKTLKIV-PLK--ESGEPLVVSVPISQIIKLS 264
D N D Y V +L RC SK+ + P K E GE VV V + + +S
Sbjct: 405 DLPNSGELDPLYVVEVLLRC--SKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAIS 462
Query: 265 SARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEANMGIRSSSYQKLVRRIEAL 323
+ RL +PKDL P+ R+++LKS E R G+PL DP +MGI+ +K+++++EA
Sbjct: 463 TVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAF 522
Query: 324 ESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRR 383
E H + P +E + K ++ IKS KR+++ + + DELK RK L R
Sbjct: 523 EHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKPCLFR 582
Query: 384 LGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQD 443
G A D++ KG C S A+EL LTE++FNG+ D+ E+ +LLSCFV+QE +
Sbjct: 583 PGKAFLLDLIHRKGYHFCYKSCADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSE 642
Query: 444 ASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFY 503
K E+L Q+Q+ A+R+AKV E K++ID E +++SF+P +M+ VY WA G+ F
Sbjct: 643 MPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFKPHLMDVVYTWATGATFA 702
Query: 504 EIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASL 563
I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE KF E ++KIKRDIVFAASL
Sbjct: 703 HICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASL 762
Query: 564 YL 565
YL
Sbjct: 763 YL 764
Score = 275 (101.9 bits), Expect = 1.8e-95, Sum P(2) = 1.8e-95
Identities = 71/152 (46%), Positives = 86/152 (56%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RK+DG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 235 MPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 294
Query: 61 MLK-GSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLE 119
+LK G D L++ L Y Q+ P + Q Q H+ L AK
Sbjct: 295 LLKKGQGDKLSATHALVYIYKSEQLSGVNFHPRYVDNKPIMQLQ--HSSWMLSVIAKRCN 352
Query: 120 EE--RDSMVIEEEDSLKNYYNLLQQYKSLKKD 149
+ + S I D L Y L Q SLK D
Sbjct: 353 SKLAQQSCRIPS-DELSFYLTLSQS--SLKAD 381
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 211/574 (36%), Positives = 349/574 (60%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FT +KF G+ FRW++SGEY+QMSGRAGRRGID +G+ I+++D ++ A+
Sbjct: 475 MPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLSIVILDQSIDEQAARC 534
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
++ G AD LNSAFHLSY M+LN +R EE SPE++L+ SFYQFQ ++P ++++ L+
Sbjct: 535 LMNGQADVLNSAFHLSYGMILNLMRIEEISPEDILKKSFYQFQNMESLPLIKEELMQLKN 594
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
E S+ I E ++K +++L Q + ++++ ++ P CLP+LQ GR + I+ G
Sbjct: 595 EETSINIPNETAVKEFHDLKLQLEKYGEEIQKVMTHPDNCLPYLQSGRLIQIKL--GGII 652
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKK--PEDSNYTVNILTRCVVSKDGAGKKT 238
P WGV++ +K ++ + ++ P ++ Y +++L + S + K
Sbjct: 653 FP----------WGVLVNV--IKREFDPNTREQVAPHET-YVLDVLLP-ISSNSMSNHKV 698
Query: 239 LK--IVPLKESGEPL--VVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARN 294
+VP + + PL +VSV ++ + +SS R+ MP++L +++ + +E +
Sbjct: 699 NPSILVPPRPNETPLYEIVSVLLTAVCNISSIRIYMPRELNSNESKLRAYRRVNEVI-EE 757
Query: 295 ASGLP-LDPEANMGIRSSSYQKLVRRIEALE-SLFDKHEISKSPLIEQKLKVLHMKQELT 352
+P LDP +M I SS+ +R++E LE LFD K + K L
Sbjct: 758 FKEIPYLDPLEHMHIESSTLSLSLRKLEILEPKLFDS-PYYKDSKHRAEYHEFRKKLNLR 816
Query: 353 AKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLT 412
A+IK I ++ ++ + ELK R+RVLRRLG+ T ++V+++KG+VACEI+S +EL L
Sbjct: 817 AQIKDISTKITNTEAIIQLRELKIRQRVLRRLGFCTLENVIDIKGRVACEITSGDELLLV 876
Query: 413 ELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDAS-KPREELELLFTQLQDTARRVAKVQLE 471
ELIF G + EE+ + LSCFV+++K + ++ +E + ++ + + A+R+A V LE
Sbjct: 877 ELIFQGFFNQMPPEEIAAALSCFVYEDKSEVSTLNLKEPFKKMYLTIIEAAKRIATVSLE 936
Query: 472 CKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLI 531
K+Q + +++ F+PDIME V W G+ F EI ++ ++EGS++R RRL+E+L+QL
Sbjct: 937 SKLQFNESDYLHQFKPDIMEPVSLWINGASFQEICIVSKLYEGSIVRTFRRLDELLKQLE 996
Query: 532 LAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
AA +G EL+ K K+ RDI+F+ASLYL
Sbjct: 997 HAAIVLGNNELKEKSVLTEQKLHRDIIFSASLYL 1030
>RGD|1305984 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000460
"maturation of 5.8S rRNA" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0000178 "exosome (RNase complex)" evidence=ISO]
InterPro:IPR012961 Pfam:PF08148 RGD:1305984 GO:GO:0005524
GO:GO:0016818 eggNOG:COG4581 HOGENOM:HOG000163047
InterPro:IPR025696 Pfam:PF13234 OrthoDB:EOG4D52WW IPI:IPI00372914
EMBL:BC091305 UniGene:Rn.145315 STRING:Q5BJW0 InParanoid:Q5BJW0
Genevestigator:Q5BJW0 Uniprot:Q5BJW0
Length = 337
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 155/321 (48%), Positives = 220/321 (68%)
Query: 246 ESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPL-DPEA 304
E GE VV V + + +S+ RL +PKDL P+ R+++LKS E R G+PL DP
Sbjct: 17 EKGEMQVVPVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPID 76
Query: 305 NMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRS 364
+MGI+ +K+++++EA E H + P +E + K ++ IKS KR+++
Sbjct: 77 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 136
Query: 365 STELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVK 424
+ + DELK RKRVLRRLG+ATS DV+E+KG+VACEISSA+EL LTE++FNG+ D+
Sbjct: 137 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 196
Query: 425 VEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNS 484
E+ +LLSCFV+QE + K E+L Q+Q+ A+R+AKV E K++ID E +++S
Sbjct: 197 SEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSS 256
Query: 485 FRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEA 544
F+P +M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE
Sbjct: 257 FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELEN 316
Query: 545 KFEEAVSKIKRDIVFAASLYL 565
KF E ++KIKRDIVFAASLYL
Sbjct: 317 KFAEGITKIKRDIVFAASLYL 337
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 607 (218.7 bits), Expect = 4.4e-58, P = 4.4e-58
Identities = 186/583 (31%), Positives = 298/583 (51%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMV-DDKMEPSTAK 59
+P +TV+F+++RK DG FR + GE+ QMSGRAGRRG+D+ G I+M DD + P+ K
Sbjct: 684 LPTRTVIFSSMRKHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYDDPLSPTDFK 743
Query: 60 MMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLE 119
++ G+ L+S F L+Y+M+LN +R E E ++++SF + +P+ +K+ ++
Sbjct: 744 EVVLGTPTKLSSQFRLTYSMILNLLRIEALKVEEMIKHSFSENSTQVLLPENQKRYDEIK 803
Query: 120 EERDSMVIE--EEDSLKNYY---NLLQQYKSLKKD-VRDIVFSPKYCLPFLQPGRFVCIE 173
++ S I + SL+ NLL +Y++L + V DI SP L+ GR VC
Sbjct: 804 KQLQSSTITPCSKCSLEGTEETCNLLTEYENLYGECVVDIHKSPVLKSQLLRVGRLVCFR 863
Query: 174 CTRGDDNSPSFSTEDHQVTWGVVI-EFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKD 232
+ F + +V+ F+ K YE+ K Y + + +D
Sbjct: 864 DVNHNGARMGFVVKSDSANNAIVLLTFDHGKD-YEEAIEK------YKLPYIP----IRD 912
Query: 233 GAGKKTLKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSE--- 289
K KI K SG VV VP I + L + + + ++ ++ SE
Sbjct: 913 YITKNFPKI---KFSGRLRVVLVPYENICFIGRYSLKTSVNSI-INNEKSAVQEASEQIQ 968
Query: 290 FLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKS---PLIEQKLKVLH 346
L + + + A R S L +E + L +K + SK+ P Q
Sbjct: 969 ILTKYQNSF--EELAFKFTRQLSLHDLT--VEK-DQLLEKLKSSKAYVCPNFRQHYVEYL 1023
Query: 347 MKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSA 406
+ L+ +++ ++R + S L + + R +VL +GY V LKG+VACE++S
Sbjct: 1024 DRYLLSQEVEKLERLI-SDENLELLPDYEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSG 1082
Query: 407 EELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKP--REELELLFTQLQDTARR 464
EL +TEL+ N L D + E+V+LLSCFV++ + Q+ P LE ++ + A +
Sbjct: 1083 WELIITELVLNNFLGDFEPAEIVALLSCFVYEGRTQEEEPPLITPRLEKGKAKILEIAEK 1142
Query: 465 VAKVQLECKVQI--DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRR 522
+ KV +E +V + + E FV S R + VY WA G F EIM+I+ EG+++R I R
Sbjct: 1143 LLKVYVEKQVSLTSEEEDFVESKRFALANVVYEWANGLSFNEIMQISVEAEGTIVRVITR 1202
Query: 523 LEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
L+E+ +++ AA IG++ L K EA KIKRDIVF ASLYL
Sbjct: 1203 LDEICREVKNAALIIGDSTLHLKMVEAQEKIKRDIVFCASLYL 1245
>TAIR|locus:2075566 [details] [associations]
symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
GO:GO:0035864 Uniprot:F4JAA5
Length = 1347
Score = 364 (133.2 bits), Expect = 7.8e-57, Sum P(2) = 7.8e-57
Identities = 92/270 (34%), Positives = 152/270 (56%)
Query: 300 LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSP---LIEQKLKVLHMKQELTAKIK 356
LDP ++ ++ + +LV +L K ++K +E+ +K+ ++ +K
Sbjct: 1079 LDPVKDLKLKDA---ELVETYYKWTNLLQKMSMNKCHGCVKLEEHMKLAREIKKHKTDLK 1135
Query: 357 SIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIF 416
++ QM S L + R VL+ +G D VV++KG+VACE++S EEL T +F
Sbjct: 1136 DLEFQM-SDEALLQMPAFQGRIDVLKNIGCIDDDLVVQIKGRVACEMNSGEELICTVCLF 1194
Query: 417 NGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKVQI 476
++++ EE V+++S FV+Q+K A +L +L DTA R+ ++Q + +QI
Sbjct: 1195 ENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKAKQRLYDTAIRLGELQAQYNLQI 1254
Query: 477 DVEGFVN-SFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAK 535
D E + + + ++E VY WAKG+ F EI E+T V EG ++R I RL+E ++ AA
Sbjct: 1255 DPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAA 1314
Query: 536 SIGETELEAKFEEAVSKIKRDIVFAASLYL 565
+G + L K + A + IKRDIVFAASLY+
Sbjct: 1315 IMGNSALHKKMDAASNAIKRDIVFAASLYV 1344
Score = 300 (110.7 bits), Expect = 7.8e-57, Sum P(2) = 7.8e-57
Identities = 66/183 (36%), Positives = 108/183 (59%)
Query: 2 PAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKM-EPSTAKM 60
PA+TVVF +RKFDG +FR + GEY QM+GRAGRRG+D+ G ++M D++ + S +
Sbjct: 755 PARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRR 814
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
++ GSA L S F L+Y M+L+ +R EE E++L+ SF +F A +P+ ++Q +++
Sbjct: 815 VIVGSATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPE-KQQLLMIKR 873
Query: 121 ERDSMVIE---EEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRG 177
+ IE E ++++YY++ + + + V Y FL GR V ++ G
Sbjct: 874 SLPTKHIECIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMG 933
Query: 178 DDN 180
DN
Sbjct: 934 IDN 936
Score = 41 (19.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 128 EEEDSLKNYYNLLQQ---YKSLKKDVRDIVFSPKYCLPFLQPGRF 169
E +D+L + + + K K+ ++ + KY +P L+P +F
Sbjct: 32 ERDDALNSLPDFVSPPAFAKETKESIKKHI-EEKYLIPRLEPDQF 75
Score = 40 (19.1 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 32/144 (22%), Positives = 56/144 (38%)
Query: 242 VPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLD 301
V L E G S + Q++ L S P L P+ ++ LK +E + L
Sbjct: 1047 VRLLEDGNKAAFSQTVQQLLDLKSDGNKFPPALDPV--KDLKLKD-AELVETYYKWTNLL 1103
Query: 302 PEANMG-----IRSSSYQKLVRRIEA-------LESLFDKHEISKSPLIEQKLKVLH--- 346
+ +M ++ + KL R I+ LE + + P + ++ VL
Sbjct: 1104 QKMSMNKCHGCVKLEEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIG 1163
Query: 347 -MKQELTAKIKS-IKRQMRSSTEL 368
+ +L +IK + +M S EL
Sbjct: 1164 CIDDDLVVQIKGRVACEMNSGEEL 1187
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 582 (209.9 bits), Expect = 2.2e-55, P = 2.2e-55
Identities = 174/578 (30%), Positives = 286/578 (49%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKM-EPSTAK 59
MPA+TVVF ++RK DG FR + GEYIQM+GRAGRRG+D G I++ + +
Sbjct: 680 MPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILCKAGVHDMGELH 739
Query: 60 MMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLE 119
M+ G L+S F L+Y M+LN +R E ++++ SF + D EK+ L
Sbjct: 740 SMMLGKPTVLHSQFRLTYTMILNLLRVEALRVTDMMKRSFSENHRDTQAH--EKRISELR 797
Query: 120 EERDSMV-IEEEDSLKN---YYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECT 175
S+ ++ E L + YY+ + + + ++ V L L GR V + +
Sbjct: 798 NTLSSLPPLDTEGQLSDLLSYYHTITELHITTQSLQQAVLESVNGLKALSVGRVVIVNNS 857
Query: 176 RGDDNSP---SFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKD 232
+ ++ S++ T+ +I EK G ++A + + + I ++ + +
Sbjct: 858 QHHNSLGVILQVSSDAVNRTFTALIICEK--G--NEEAASDEQSNKVALPIYSKTLFIPE 913
Query: 233 GAGKKTLKIVPLKESGEPLVVSVPI--SQIIKLSSARLPMPKDLL--PLQTRENMLKSTS 288
G T++ + L++ ++ + +II + RL P+ L P Q +
Sbjct: 914 GPCSHTVQKLKLQDISAITTKALKVIPERIIDNYNKRL-QPRFRLDPPGQAISTATQELL 972
Query: 289 EFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALE-SLFDKHEISKSPLIEQKLKVLH 346
N G+ LDP ++ ++ + V R L+ SL D H I SP ++ +
Sbjct: 973 RLAEANMGGMTVLDPVNDLHLKGVDVVEGVMRQRVLQDSLKDFHCIH-SPTFSEQFTRVQ 1031
Query: 347 MKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSA 406
+ + ++ + + S L E R +VL L Y S V+LKG+VAC+ISS
Sbjct: 1032 ERMSVQEELDKLLFLV-SDQSLTLLPEYHQRIKVLEALQYVDSSGAVQLKGRVACQISS- 1089
Query: 407 EELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVA 466
EL LTEL+F L + EE +LLSC V+ + Q L+ Q+ A+R+
Sbjct: 1090 HELLLTELLFENTLSPLAPEESAALLSCLVFTQNTQIEPHITNTLQEGINQVLAVAQRIG 1149
Query: 467 KVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEV 526
+Q +C + E FV F+ + E VY WA+G F EI ++T V EG+++R I+RL+EV
Sbjct: 1150 DLQRDCGIAQTAEDFVAQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTIVRCIQRLDEV 1209
Query: 527 LQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
L+++ AA+ +G++ L +K E A I+RDIVF ASLY
Sbjct: 1210 LKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLY 1247
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 396 (144.5 bits), Expect = 9.6e-54, Sum P(2) = 9.6e-54
Identities = 105/334 (31%), Positives = 178/334 (53%)
Query: 239 LKIVPLKESGEPL-VVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASG 297
L +P + + L V +PI+ I +++ + + L ++ ++ + L++ S
Sbjct: 961 LNPLPTRAADMTLKVFKIPIADIECVTNTIVKLSGPTWYLNIKKEAIRFADKELSKLCSS 1020
Query: 298 --LPLDPEANMG-IRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAK 354
P+ E + I+ + ++ + ++ + K P + ++ + ++
Sbjct: 1021 WTTPVWDELDWARIKELQLRDILDKRREQANIAQSCDCLKCPKFLKHFEMQRDEWQIKEN 1080
Query: 355 IKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTEL 414
I +K Q+ S L + + R +VL+ LG+ V+LKGKVACEI SA+EL LTEL
Sbjct: 1081 ISQLK-QLMSDQNLQLLPDYEQRIQVLKDLGFVDEQSRVQLKGKVACEIHSADELVLTEL 1139
Query: 415 IFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARRVAKVQLECKV 474
I VL + + EE+V+LLS FV+QEK ++ LE + + +V VQ++ +V
Sbjct: 1140 ILENVLAEYEPEEIVALLSAFVFQEKTENVPTLNPRLEKGKEAIIRISEKVNDVQIQHQV 1199
Query: 475 -QI--DVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLI 531
Q D+ F + R + E VY WAKG F I ++T V EG+++R I RL+E +++
Sbjct: 1200 LQSTEDINDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDETCREVK 1259
Query: 532 LAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
AAK +G+ L AK +EA KIKRD++FAASLY+
Sbjct: 1260 NAAKLVGDPTLYAKMQEAQEKIKRDVIFAASLYM 1293
Score = 230 (86.0 bits), Expect = 9.6e-54, Sum P(2) = 9.6e-54
Identities = 51/122 (41%), Positives = 73/122 (59%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKME--PSTA 58
+P +TVVF+ RK DG FR + GEY QM+GRAGRRG+D G I++ K E P+ A
Sbjct: 732 LPTRTVVFSGFRKHDGKGFRDLLPGEYTQMAGRAGRRGLDNVGYVIVVNSGKDEAPPAGA 791
Query: 59 -KMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKV 117
+ M+ G L S F L+YNM+LN +R E E +++ SF + +P+ EKQ ++
Sbjct: 792 LRKMILGDPTKLRSQFRLTYNMILNLLRVEALKIEEMIKRSFSENATQALLPEHEKQVQI 851
Query: 118 LE 119
E
Sbjct: 852 SE 853
Score = 38 (18.4 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 10/52 (19%), Positives = 28/52 (53%)
Query: 99 FYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNL-LQQYKSLKKD 149
F + ++ A D E+ + L+EE ++ E++++ + + ++ +S +D
Sbjct: 209 FEEAKSKEAADDDEEVEQTLQEEESNINPEQDETASDVGGVKIEDEESASED 260
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 560 (202.2 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 176/581 (30%), Positives = 284/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 671 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 729
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 730 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 789
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE D V + L YY+ ++ + ++ + L L GR V
Sbjct: 790 TKRLGALEEP-D--VTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSLSVGRVVV 846
Query: 172 IECTRGDDNSPSFSTEDHQVTWGVVIEFEKV--KGVYEDDANKKPE--DSNYTVNILTRC 227
++ +R N+ + + V + K + ED K P D Y +++
Sbjct: 847 VK-SREHHNALGVILQVSSTSTSRVFTTLVLCDKPMSEDPQQKGPASPDVPYPDDLVGFK 905
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K P +
Sbjct: 906 LFLPEGPCDHTVAKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPSAAVTTAV 965
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 966 QELLRLAQAHLAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYV 1025
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 1026 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 1084
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ ++Q A+
Sbjct: 1085 SS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVQAVAK 1143
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 1144 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 1203
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1204 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
>UNIPROTKB|F5H6Y7 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AL844853 EMBL:AL662849 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00946735
SMR:F5H6Y7 Ensembl:ENST00000547025 Ensembl:ENST00000547224
Ensembl:ENST00000547296 Ensembl:ENST00000548561
Ensembl:ENST00000552010 Uniprot:F5H6Y7
Length = 880
Score = 553 (199.7 bits), Expect = 7.2e-53, P = 7.2e-53
Identities = 171/581 (29%), Positives = 282/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 305 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 363
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 364 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 423
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE M + D L YY+ ++ + ++ + L L GR V
Sbjct: 424 TKRLGALEEP--DMTGQLVD-LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVV 480
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC 227
++ + N+ S+ + ++ +K D + Y +++
Sbjct: 481 VK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFK 539
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K PL +
Sbjct: 540 LFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAV 599
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 600 QELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYL 659
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 660 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 718
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+
Sbjct: 719 SS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAK 777
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 778 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 837
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 838 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 878
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 553 (199.7 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 171/581 (29%), Positives = 282/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 478 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 536
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 537 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 596
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE M + D L YY+ ++ + ++ + L L GR V
Sbjct: 597 TKRLGALEEP--DMTGQLVD-LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVV 653
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC 227
++ + N+ S+ + ++ +K D + Y +++
Sbjct: 654 VK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFK 712
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K PL +
Sbjct: 713 LFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAV 772
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 773 QELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYL 832
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 833 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 891
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+
Sbjct: 892 SS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAK 950
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 951 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 1010
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1011 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1051
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 553 (199.7 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 171/581 (29%), Positives = 282/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 478 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 536
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 537 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 596
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE M + D L YY+ ++ + ++ + L L GR V
Sbjct: 597 TKRLGALEEP--DMTGQLVD-LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVV 653
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC 227
++ + N+ S+ + ++ +K D + Y +++
Sbjct: 654 VK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFK 712
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K PL +
Sbjct: 713 LFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAV 772
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 773 QELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYL 832
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 833 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 891
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+
Sbjct: 892 SS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAK 950
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 951 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 1010
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1011 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1051
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 553 (199.7 bits), Expect = 1.9e-52, P = 1.9e-52
Identities = 171/581 (29%), Positives = 282/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 513 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 571
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 572 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 631
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE M + D L YY+ ++ + ++ + L L GR V
Sbjct: 632 TKRLGALEEP--DMTGQLVD-LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVV 688
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC 227
++ + N+ S+ + ++ +K D + Y +++
Sbjct: 689 VK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFK 747
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K PL +
Sbjct: 748 LFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAV 807
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 808 QELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYL 867
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 868 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 926
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+
Sbjct: 927 SS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAK 985
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 986 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 1045
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1046 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1086
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 553 (199.7 bits), Expect = 1.9e-52, P = 1.9e-52
Identities = 171/581 (29%), Positives = 282/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 513 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 571
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 572 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 631
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE M + D L YY+ ++ + ++ + L L GR V
Sbjct: 632 TKRLGALEEP--DMTGQLVD-LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVV 688
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC 227
++ + N+ S+ + ++ +K D + Y +++
Sbjct: 689 VK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFK 747
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K PL +
Sbjct: 748 LFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAV 807
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 808 QELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYL 867
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 868 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 926
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+
Sbjct: 927 SS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAK 985
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 986 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 1045
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1046 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1086
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 554 (200.1 bits), Expect = 2.2e-52, P = 2.2e-52
Identities = 176/585 (30%), Positives = 285/585 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 671 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 729
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 730 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALDEL 789
Query: 112 EKQAKVLEE-ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFV 170
K+ LEE + +++ L YY ++ + ++ + L L GR V
Sbjct: 790 TKRLGALEEPDTTGQLVD----LSEYYGWGEELTETRSLIQRRIMESVNGLKSLSAGRVV 845
Query: 171 CIEC-----TRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPE--DSNYTVNI 223
++ T G S ++ T V+ + K V ED + P D Y ++
Sbjct: 846 VVKNQEYHNTLGVILQVSSNSASRVFTTLVLCD----KPVSEDPQERAPATPDVPYPDDL 901
Query: 224 LTRCVVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTR 280
+ + +G T+ K+ P + V+ V +I++ S + P K P+
Sbjct: 902 VGFKLFLPEGPCDHTVAKLQPGDVATITTKVLRVNGEKILEDFSKRQQPKFKKDPPIAAV 961
Query: 281 ENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIE 339
++ +G P LDP ++ ++ S + R LE L + SP
Sbjct: 962 TTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPRFS 1021
Query: 340 QKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKV 399
+ L + ++ +++ + R + S L E R VLR LGY V+L G+V
Sbjct: 1022 AQYVKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV 1080
Query: 400 ACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQ 459
AC +SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++
Sbjct: 1081 ACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVERVR 1139
Query: 460 DTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRA 519
ARR+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R
Sbjct: 1140 AVARRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRC 1199
Query: 520 IRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
I+RL E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1200 IQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 553 (199.7 bits), Expect = 2.8e-52, P = 2.8e-52
Identities = 171/581 (29%), Positives = 282/581 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 671 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 729
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 730 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 789
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE M + D L YY+ ++ + ++ + L L GR V
Sbjct: 790 TKRLGALEEP--DMTGQLVD-LPEYYSWGEELTETQHMIQRRIMESVNGLKSLSAGRVVV 846
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC 227
++ + N+ S+ + ++ +K D + Y +++
Sbjct: 847 VK-NQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYPDDLVGFK 905
Query: 228 VVSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENML 284
+ +G T+ K+ P + V+ V +I++ S + P K PL +
Sbjct: 906 LFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAV 965
Query: 285 KSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
+ + +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 966 QELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYL 1025
Query: 344 VLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEI 403
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +
Sbjct: 1026 KLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAM 1084
Query: 404 SSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTAR 463
SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+
Sbjct: 1085 SS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRAVAK 1143
Query: 464 RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRL 523
R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 1144 RIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRL 1203
Query: 524 EEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1204 AEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 552 (199.4 bits), Expect = 3.2e-52, P = 3.2e-52
Identities = 174/587 (29%), Positives = 288/587 (49%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 630 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 688
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ DL
Sbjct: 689 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALADL 748
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE D V + L YY+ ++ + ++ + L L GR V
Sbjct: 749 TKRLGALEEP-D--VTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSLSVGRVVV 805
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPE--DSNYTVNILT 225
++ N+ S+ + ++ +K V E+ +K P D + +++
Sbjct: 806 VK-NEEHHNALGVILQVSSNSTSRVFTTLVLCDK-PAVSENPRDKGPATPDVPHPDDLVG 863
Query: 226 RCVVSKDGAGKKTL-KIVPLKESGEPLVVSVPISQII--KLSS--ARLPMPKDLL--PLQ 278
+ +G + T+ K+ P G+ +S + ++ K+S ++ PK PL
Sbjct: 864 FKLFLPEGPCEHTVAKLQP----GDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPPLA 919
Query: 279 TRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPL 337
++ +G P LDP ++ ++ + + R LE L + SP
Sbjct: 920 AVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHSPR 979
Query: 338 IEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKG 397
+ L + ++ +++ + R + S L E R VLR LGY V+L G
Sbjct: 980 FPAQYVKLQERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAG 1038
Query: 398 KVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQ 457
+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +
Sbjct: 1039 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVER 1097
Query: 458 LQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLI 517
++ A+R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++
Sbjct: 1098 VKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVV 1157
Query: 518 RAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
R I+RL E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1158 RCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1204
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 552 (199.4 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 174/587 (29%), Positives = 288/587 (49%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 665 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 723
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ DL
Sbjct: 724 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALADL 783
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE D V + L YY+ ++ + ++ + L L GR V
Sbjct: 784 TKRLGALEEP-D--VTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSLSVGRVVV 840
Query: 172 IECTRGDDNSPSF----STEDHQVTWGVVIEFEKVKGVYEDDANKKPE--DSNYTVNILT 225
++ N+ S+ + ++ +K V E+ +K P D + +++
Sbjct: 841 VK-NEEHHNALGVILQVSSNSTSRVFTTLVLCDK-PAVSENPRDKGPATPDVPHPDDLVG 898
Query: 226 RCVVSKDGAGKKTL-KIVPLKESGEPLVVSVPISQII--KLSS--ARLPMPKDLL--PLQ 278
+ +G + T+ K+ P G+ +S + ++ K+S ++ PK PL
Sbjct: 899 FKLFLPEGPCEHTVAKLQP----GDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPPLA 954
Query: 279 TRENMLKSTSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPL 337
++ +G P LDP ++ ++ + + R LE L + SP
Sbjct: 955 AVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHSPR 1014
Query: 338 IEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKG 397
+ L + ++ +++ + R + S L E R VLR LGY V+L G
Sbjct: 1015 FPAQYVKLQERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAG 1073
Query: 398 KVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQ 457
+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +
Sbjct: 1074 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVER 1132
Query: 458 LQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLI 517
++ A+R+ +VQ+ C + VE FV ++E VY WA+G F E+ ++ EG ++
Sbjct: 1133 VKAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVV 1192
Query: 518 RAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
R I+RL E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1193 RCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1239
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 552 (199.4 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 172/580 (29%), Positives = 277/580 (47%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVVF ++RK DG FR + GEY+QM+GRAGRRG+D G IL+ ++ P A +
Sbjct: 671 MPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV-PEMADL 729
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQA-------DHAIPDL 111
M+ G L S F L+Y M+LN +R + E++++ SF +F + + A+ +L
Sbjct: 730 HRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHEQALAEL 789
Query: 112 EKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVC 171
K+ LEE V + L YY+ ++ + ++ + L L GR V
Sbjct: 790 TKKLGALEEPE---VTGQLVDLPEYYSWGEELTETRSQIQHRIIESVNGLKSLSAGRVVV 846
Query: 172 IECTRGDDNSPSFSTEDHQVTWGVVIEFEKV-KGVYEDDANKKPE--DSNYTVNILTRCV 228
++ + T V K V ED + P D Y +++ +
Sbjct: 847 VKNQEHHNALGVILQVSSNSTSRVFTALVLCDKPVSEDPRERGPASPDVPYPDDLVGFKL 906
Query: 229 VSKDGAGKKTL-KIVPLKESG-EPLVVSVPISQIIK-LSSARLPMPKDLLPLQTRENMLK 285
+G T+ K+ P + V+ + +I++ S + P K P ++
Sbjct: 907 FLPEGPCDHTVAKLQPGDVAAITTKVLRLNGDKILEDFSKRQQPKFKKDPPSAAVTTAVQ 966
Query: 286 STSEFLARNASGLP-LDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKV 344
+ +G P LDP ++ ++ S + R LE L + SP +
Sbjct: 967 ELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYLK 1026
Query: 345 LHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEIS 404
L + ++ +++ + R + S L E R VLR LGY V+L G+VAC +S
Sbjct: 1027 LRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMS 1085
Query: 405 SAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTARR 464
S EL LTEL+F+ L ++ EE+ +LLS V Q + L+ +++ A+R
Sbjct: 1086 S-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVRTVAKR 1144
Query: 465 VAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLE 524
+ +VQ C + VE FV ++E VY WA+G F E+ ++ EG ++R I+RL
Sbjct: 1145 IGEVQAACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLA 1204
Query: 525 EVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
E+ + L AA+ +GE L AK E A + ++RDIVFAASLY
Sbjct: 1205 EMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244
>POMBASE|SPCC550.03c [details] [associations]
symbol:SPCC550.03c "Ski complex RNA helicase Ski2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
[GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
NextBio:20800023 Uniprot:O59801
Length = 1213
Score = 351 (128.6 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 93/285 (32%), Positives = 149/285 (52%)
Query: 285 KSTSEFLA-RNASGLPLDPEANMG-IRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKL 342
K + +F + + S L L E N +R + + + L++ + I +P
Sbjct: 931 KLSEQFASIKKFSDL-LFEEVNWSKVRDFEFCEAFEKRNFLQNKLSGNPIISTPNFLTHF 989
Query: 343 KVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACE 402
+ + + EL + I ++ + S L + + R +VL+ LGY ++ V LKG+VACE
Sbjct: 990 ALAYQEYELESNIDNLSSYI-SDQNLELLPDYEQRIKVLQELGYIDAERTVLLKGRVACE 1048
Query: 403 ISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQLQDTA 462
I+S EL LTELI L D EE ++LLS FV+ EK + L+ + A
Sbjct: 1049 INSTSELVLTELILENSLADFSCEETIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVA 1108
Query: 463 RRVAKVQLECKVQIDVEG--FVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAI 520
+V ++Q +V EG F + R +ME Y WA+G F I ++T V EGS++R I
Sbjct: 1109 EKVNQIQEHYQVLYFNEGNDFESQPRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTI 1168
Query: 521 RRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 565
RL+EVL++ AA+ +G++ + K EE + I+R+IVF SLY+
Sbjct: 1169 IRLDEVLRECRGAARVVGDSSMYTKMEECQNLIRRNIVFCPSLYM 1213
Score = 245 (91.3 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 59/158 (37%), Positives = 90/158 (56%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAK+VVF+ +K DG FR + GEY Q SGRAGRRG+D G I++ ++ P TA +
Sbjct: 655 MPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAGRRGLDVTGTVIILSRSEL-PDTASL 713
Query: 61 --MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVL 118
M+ G + L S F L+YNM+LN +R E E++++ SF + +P E++ K
Sbjct: 714 RHMIMGPSSKLISQFRLTYNMILNLLRVETLRIEDMIKRSFSENVNQTLVPQHEEKIKSF 773
Query: 119 EEERDSMVIEEED-SLKNYYNLLQQYKSLKKDVRDIVF 155
EE+ ++ E D LK + L +S K+ + + F
Sbjct: 774 EEKLSALKKEMSDVDLKEIKSCLLSSESFKEYTKKMHF 811
Score = 42 (19.8 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 172 IECTRGDDN-SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVS 230
+E R +D SFS +Q V EK+K E + K E S+ + + C++S
Sbjct: 741 VETLRIEDMIKRSFSENVNQTL--VPQHEEKIKSFEEKLSALKKEMSDVDLKEIKSCLLS 798
Query: 231 KDGAGKKTLKI 241
+ + T K+
Sbjct: 799 SESFKEYTKKM 809
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 512 (185.3 bits), Expect = 6.2e-48, P = 6.2e-48
Identities = 185/593 (31%), Positives = 294/593 (49%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTA-K 59
MPA+TVVF + +KFDG + R + GEYIQM+GRAGRRG DE G I+M + PS +
Sbjct: 621 MPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGSVPPSMELR 680
Query: 60 MMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLE 119
M+ G + L S F L Y ++L +R E E++++ SF +F +P +KQ + L
Sbjct: 681 PMILGLPEKLQSQFILRYAVILTCLRIESIKVEDIMKFSFKEFNLKLQLPTQQKQLR-LA 739
Query: 120 EERDSMVI---EEEDSLKNYYNLLQQY-KSLKKDVRDIVFSPKYCLPFLQPGRFVCIECT 175
E++ +M+ E L N+Y+ +Y K + ++ +V PK L+ GR + I T
Sbjct: 740 EDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKE-LKAGRVIVI--T 796
Query: 176 RGDD-NSPSF-----STEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILT--RC 227
+G N + S + V++ + K +D + + + Y + LT
Sbjct: 797 QGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFKA--KDSNSLQQGELYYKILSLTPRNM 854
Query: 228 VVSKDGAGKKTLKIVPLKE--SGEPLVVSVPISQIIKLSSAR-LPMPKDLLPLQTRENML 284
G G T+ + + S + V II+ R L KD P +++
Sbjct: 855 TFQPVGIGGHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPP---SGSVV 911
Query: 285 KSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESL-FDKHEISKS----PL-- 337
K+ +E N S + +P+ N+ + S + +V + L + H + K P
Sbjct: 912 KAVTELNQLNESYID-NPD-NIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPHTN 969
Query: 338 ---IEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVE 394
EQ+ ++ ++ L I+ + R S+ L + + +VLR L Y D V
Sbjct: 970 IAGFEQEFAKVYERRMLEIHIEEL-RFKNSARNLTLYPDYCNKLKVLRALKYIDELDEVT 1028
Query: 395 LKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELE-- 452
LKGKVACE+ EL +TELI + D++ E+ +LLS V+Q K+QD E L+
Sbjct: 1029 LKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEALKEC 1087
Query: 453 -LLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPV 511
F Q+ DT +A+ Q + I+ + +N F ++E VY WA+ F EIM++T V
Sbjct: 1088 VAAFEQINDTI--LAEEQ-RFQAAIETDNRLN-F--GLLEVVYEWARNKPFAEIMKLTTV 1141
Query: 512 FEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
EG ++R I++L E ++ + AA IG L++K EEA + IKRDIVF ASLY
Sbjct: 1142 QEGIIVRCIQQLNETVRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 313 (115.2 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
Identities = 86/257 (33%), Positives = 137/257 (53%)
Query: 313 YQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKD 372
+Q L+ R + +F I K P + Q + + KI+ + M S L+
Sbjct: 1033 HQILLDRTNIRDEIFKLKSI-KCPNLSQHIVPKFKAHVIKKKIEELYHLM-SDQNLSLLP 1090
Query: 373 ELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLL 432
+ + R VL+ + + V LKG+VACEI+S EL LTELI + L + EE+V+LL
Sbjct: 1091 DYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGSFEPEEIVALL 1150
Query: 433 SCFVWQEKLQDASKP--REELELLFTQLQDTARRVAKVQLECKVQI--DVEGFVNSFRPD 488
S FV++ K ++ P L ++++ +++ V ++ + D F++ R
Sbjct: 1151 SVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCVFNTHQIPLTQDEAEFLDRKRFA 1210
Query: 489 IMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEE 548
+M VY WA+G F EIME++P EG+++R I L+E+ +++ A+ IG + L K
Sbjct: 1211 MMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSR 1270
Query: 549 AVSKIKRDIVFAASLYL 565
A IKRDIVFAASLYL
Sbjct: 1271 AQELIKRDIVFAASLYL 1287
Score = 263 (97.6 bits), Expect = 5.5e-47, Sum P(2) = 5.5e-47
Identities = 61/176 (34%), Positives = 103/176 (58%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMV-DDKMEPSTAK 59
+P +TV+F+++RK DG+ R ++ GE+ QM+GRAGRRG+D G I+M + + +T K
Sbjct: 731 LPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFK 790
Query: 60 MMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLE 119
+ G L S F L+YNM+LN +R E E +++ SF + + P+ EKQ KVL+
Sbjct: 791 EVTMGVPTRLQSQFRLTYNMILNLLRIEALRVEEMIKYSFSENAKETLQPEHEKQIKVLQ 850
Query: 120 EERDSMVIEE----EDSLKNYYNLLQQYKSLKKDV-RDIVFSPKYCLPFLQPGRFV 170
EE ++ + ++ ++ + L+ YK ++ +++V SP L L+ GR V
Sbjct: 851 EELQTIEYKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSI-LHILKEGRLV 905
Score = 39 (18.8 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 114 QAKVLEEERDSMVIEEE 130
+AK+ EEE+ + I EE
Sbjct: 241 EAKLKEEEKSAKSISEE 257
Score = 38 (18.4 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 90 SP-ENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKN 135
SP EN +N QF+ + +++ + + E ++ + EEE S K+
Sbjct: 209 SPAENEDQNG--QFKELKQLNEIDNELDIRIEANEAKLKEEEKSAKS 253
Score = 37 (18.1 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 261 IKLSSARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGI 308
I+ + A+L + + E M ++T E A NA +D +GI
Sbjct: 237 IEANEAKLKEEEKSAKSISEEIMEEATEETTADNADDAEIDELLPIGI 284
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 291 (107.5 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 77/232 (33%), Positives = 123/232 (53%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPAKTVVFT++ KFDG + R I+SGEYIQM+GRAGRRG+D+RGI I+M+D + A
Sbjct: 612 MPAKTVVFTSLTKFDGLEKRLITSGEYIQMAGRAGRRGLDDRGIVIIMLDTPLHWREAHK 671
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLEE 120
+ G A+ L S FHL YNM+LN +R E +PE ++ SF Q+Q + K+L +
Sbjct: 672 LFVGEANRLVSQFHLGYNMILNLLRIEGITPEFMIERSFIQYQMKKNLSQ-----KILAK 726
Query: 121 ERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCIECTRGDDN 180
++ +EE +K +N L ++ D + + L + + I+ +
Sbjct: 727 KK----VEEH--IKQIFNHLT---NIHLDENNNEITKDELLTKIMYNNYEQIKNNQNLGT 777
Query: 181 SPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRCVVSKD 232
S +D V++ +K K + E+ + S+Y+ V++K+
Sbjct: 778 SSELKIKDTSSNDEVILNADKHKEIKEEFKEEYTNYSSYSTQHYNENVINKE 829
Score = 286 (105.7 bits), Expect = 7.8e-47, Sum P(2) = 7.8e-47
Identities = 71/253 (28%), Positives = 125/253 (49%)
Query: 316 LVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELT--AKIKSIKRQMRSSTELAFKDE 373
L IE + K E+ ++ + L + + L K IK S TE +
Sbjct: 1098 LESNIEKCRFIVLKKELKNMLVLLESLNYIEVSYNLENLKNEKDIKTIENSITEHIKNER 1157
Query: 374 LKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLS 433
+ K + + + VV +KG++A I S +EL ++EL F+ + + + LS
Sbjct: 1158 IMNIKNETYKNNHEEKNYVVTMKGQIASAILSVDELVISELFFSNFFSKYNYDYICAFLS 1217
Query: 434 CFVWQEKLQDASKPREELELL-FTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEA 492
CFV+ E + + + + Q+ TA VA EC + I+++ +++ F+ IM
Sbjct: 1218 CFVYDESTSKEITINDPILVEGYQQIIKTANHVATKMNECGMNINLKDYIDKFKSAIMPI 1277
Query: 493 VYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSK 552
WA+G F EI+ + ++EGS+IR +RRL+E+++Q+I A + I + A +K
Sbjct: 1278 ALLWARGHSFVEILSDSQIYEGSIIRTLRRLDELIRQMICAFRGINNDSMCETLTLATNK 1337
Query: 553 IKRDIVFAASLYL 565
++R I F+ SLYL
Sbjct: 1338 LRRGIPFSPSLYL 1350
Score = 80 (33.2 bits), Expect = 3.2e-25, Sum P(2) = 3.2e-25
Identities = 36/180 (20%), Positives = 83/180 (46%)
Query: 252 VVSVPISQIIKLSSARLPMPK--DLLPLQTRENMLKSTSEFLA--RNASGLPLDPEANMG 307
V+S I + +LS+ L + K D + EN+ + + + +P+ MG
Sbjct: 988 VISFNIKCVYQLSAVVLSIDKPFDKKNEEQIENIKTKYNTMVTCLKGEKNIPVINPNQMG 1047
Query: 308 IRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTE 367
I++ ++ +V+ ++ E++ +K+++ + + + ++ L + ++ +
Sbjct: 1048 IKNETFISIVKNLKFHENIINKNKLLNNKNLNKYYQMYSKYVALQCEKNILESNIEKCRF 1107
Query: 368 LAFKDELKARKRVLRRLGYA-TSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVE 426
+ K ELK +L L Y S ++ LK + +I + E ++TE I N + ++K E
Sbjct: 1108 IVLKKELKNMLVLLESLNYIEVSYNLENLKNEK--DIKTIEN-SITEHIKNERIMNIKNE 1164
Score = 51 (23.0 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 133 LKNYYNLLQQYKSLKKDVRDIVFSPKYCLPFLQPGRFVCI 172
+ N+Y + Q+ + + R I+ K+ P+L GR + I
Sbjct: 840 ISNFYTMKQKLIDVGETYRYILTMKKHITPYLSLGRLLYI 879
Score = 38 (18.4 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 268 LPMPKDLLPLQTRENMLK---STSEF 290
LP+ K+++ + +E++LK ST F
Sbjct: 581 LPIIKEIIEIMFQESLLKVLFSTETF 606
Score = 37 (18.1 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 172 IECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVN 222
+ C +G+ N P + + I K +E+ NK +N +N
Sbjct: 1029 VTCLKGEKNIPVINPNQMGIKNETFISIVKNLKFHENIINKNKLLNNKNLN 1079
>WB|WBGene00008502 [details] [associations]
symbol:skih-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
NextBio:899374 Uniprot:Q19103
Length = 1266
Score = 290 (107.1 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 77/230 (33%), Positives = 124/230 (53%)
Query: 339 EQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGK 398
++ VL + + KI+S++ ++ SS L +E R +VL L + +V LKG+
Sbjct: 1041 DEHFSVLRDRIRIERKIESLEYEL-SSDALLLSEEYHNRLKVLEALNFV-EQKMVSLKGR 1098
Query: 399 VACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDASKPREELELLFTQL 458
+ CEI +EL +TELI + E+ +LLS Q + + + +F ++
Sbjct: 1099 IGCEIHH-QELLITELILDYKFHQRSPAELAALLSTLTCQ--YNSGREMQFGGDTVFGEI 1155
Query: 459 QDTAR----RVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEG 514
++ + R+ V + K QI G R D+ME VY WA G+ FY+IME+T EG
Sbjct: 1156 SESVKSVLTRLESVASKHKSQISDLGC--EIRFDLMEVVYEWANGTPFYQIMEMTDCQEG 1213
Query: 515 SLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAASLY 564
+++ I+RL+EV + + A + +G+ L K EE + I+RDIVFAASLY
Sbjct: 1214 LIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEEVSASIRRDIVFAASLY 1263
Score = 211 (79.3 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 45/121 (37%), Positives = 74/121 (61%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKM--EPSTA 58
MPA+ VVF ++ K DG + R ++ GEY QM+GRAGRRG+D G I++ D +P
Sbjct: 667 MPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAGRRGLDLTGTVIIICKDSTVPQPDVL 726
Query: 59 KMMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVL 118
K ++ G A L S F ++Y+M+LN +R E+ E++L+ S+ + +D EK+ ++
Sbjct: 727 KNLISGQALRLESKFRVTYSMILNLLRVEQLKIEDMLQRSYVE--SDSLRESKEKRKSLV 784
Query: 119 E 119
+
Sbjct: 785 D 785
Score = 59 (25.8 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 315 KLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDEL 374
++ R+IE+LE + S +LKVL + K+ S+K R E+ + EL
Sbjct: 1052 RIERKIESLEYELSSDALLLSEEYHNRLKVLEALNFVEQKMVSLKG--RIGCEIHHQ-EL 1108
Query: 375 KARKRVLRRLGYATSD-DVVELKGKVACEISSAEELTLT-ELIFNGVLKDVK 424
+ +L + S ++ L + C+ +S E+ + +F + + VK
Sbjct: 1109 LITELILDYKFHQRSPAELAALLSTLTCQYNSGREMQFGGDTVFGEISESVK 1160
Score = 54 (24.1 bits), Expect = 7.1e-40, Sum P(3) = 7.1e-40
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 251 LVVSVPISQIIKLSSARL---PMPKDLLPLQTRENMLKSTSEFLARNAS 296
LV S + ++A + +PK L T EN L STS+F R A+
Sbjct: 872 LVASADADETTNKNAAAIGFSKLPKSELSWLTEENSLLSTSKFGTRGAA 920
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 414 (150.8 bits), Expect = 3.8e-38, P = 3.8e-38
Identities = 79/109 (72%), Positives = 91/109 (83%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TV+FTN RKFDG FRWISSGEYIQMSGRAGRRG+D+RGI ILMVD+KM P+ K
Sbjct: 489 MPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQ 548
Query: 61 MLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIP 109
+LKGSAD LNSAFHL+YNM+LN +R EE +PE +L SFYQFQ AIP
Sbjct: 549 LLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIP 597
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 388 (141.6 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 127/483 (26%), Positives = 232/483 (48%)
Query: 108 IPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVRDIVFS-PKYCLPFLQP 166
I L++Q K L + ++ E D + +YY L Q K + +++I+ + P L
Sbjct: 910 IEKLQQQQKQLAQV--DCILGEPD-IDHYYKLFSQAKKYNQQIQNIILNLPND--NHLSI 964
Query: 167 GRFVCIECTRG-------DDNSPSFSTEDHQV------TWGVVIEFEK--VKGVYEDDAN 211
GR V + + DD+ + +D ++ T G+++E + +K +
Sbjct: 965 GRVVVLSTSSNIEKEVNDDDDDDDDNNDDDEIFENEKYTIGLILECKSTLIKQYTNTKVD 1024
Query: 212 KKPEDSNYTVNI---LTRCV---VSKDGAGKKTLKIVPLKESGEPLVVSVPISQIIKLSS 265
+ + + + I + CV + GK+ +K+ E L + + I L+
Sbjct: 1025 RVFKIFSLKLKIENDIVLCVGNEIITSSGGKEIMKVC-----NEKLQLKQSDLKSI-LAG 1078
Query: 266 ARLPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALES 325
A ++L + +L+ E+ +DP + ++ + ++++E
Sbjct: 1079 AESGGESEILINSLEQQLLRLIEEY-PLPLGPKSIDPIKQLKLKDVDFVSTYDHLQSIEK 1137
Query: 326 LFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLRRLG 385
L + + K P + + + +L I+ K S L + R +L LG
Sbjct: 1138 LIPESKCHKCPRLHDHYEQTEKRYQLQYAIRDAK-YTASDENLKLMPQFNIRLDILHELG 1196
Query: 386 YATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEK--LQD 443
Y ++ V LKG+V+ EI++ E+L +TELIF +++ E+VS+LSC ++QEK +Q
Sbjct: 1197 YIDDENTVTLKGRVSREINTCEDLVITELIFENAFINLEPSEVVSVLSCLIFQEKDAVQP 1256
Query: 444 ASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNS-FRPDIMEAVYAWAKGSKF 502
+ PR LE L TA + KV+ + + + + + + + +M+ VY WA+G+ F
Sbjct: 1257 SLTPR--LEEAKQNLIKTAEKTYKVESDKGLDVVPDDKLETTLKFGLMQVVYEWARGTPF 1314
Query: 503 YEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKRDIVFAAS 562
+I +T V EGS++RAI R+ E Q++ AA+ IG+T+L K EEA+ IKRDIVF +S
Sbjct: 1315 NDICTLTNVLEGSIVRAITRIGETCQEVRNAARVIGDTKLLQKMEEAMRLIKRDIVFTSS 1374
Query: 563 LYL 565
LY+
Sbjct: 1375 LYV 1377
Score = 308 (113.5 bits), Expect = 7.2e-24, P = 7.2e-24
Identities = 109/356 (30%), Positives = 171/356 (48%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMV-DDKMEPSTAK 59
MPAKTVV+++ RK DG FR + GEY QMSGRAGRRG+D+ G I+ D E +T +
Sbjct: 795 MPAKTVVYSSTRKHDGITFRDLIPGEYTQMSGRAGRRGLDKVGTVIITYWKDIPEQATIE 854
Query: 60 MMLKGSADSLNSAFHLSYNMLLNQIRCEEGSPENLLRNSFYQFQADHAIPDLEKQAKVLE 119
M+ G+ LNS F L+YNM+LN +R + E++++ SF +F + +P +EKQ + L+
Sbjct: 855 SMILGTPSRLNSQFRLTYNMILNLLRVPDFKVEDMIKRSFSEFSSQKELPGIEKQIEKLQ 914
Query: 120 EERDSMV----IEEEDSLKNYYNLLQQYKSLKKDVRDIVFSPKYCLP---FLQPGRFVCI 172
+++ + I E + +YY L Q K + +++I+ + LP L GR V +
Sbjct: 915 QQQKQLAQVDCILGEPDIDHYYKLFSQAKKYNQQIQNIILN----LPNDNHLSIGRVVVL 970
Query: 173 ECTRGDDNSPSFSTEDHQVTWGVVIEFEKVKGVYEDDANKKPEDSNYTVNILTRC--VVS 230
+ + + +D DD ++ E+ YT+ ++ C +
Sbjct: 971 STSSNIEKEVNDDDDDDDDN--------------NDD-DEIFENEKYTIGLILECKSTLI 1015
Query: 231 KDGAGKKT---LKIVPLKESGEPLVVSVPISQIIKLSSARLPMPKDLLPLQTRENMLKST 287
K K KI LK E +V ++II S + M LQ +++ LKS
Sbjct: 1016 KQYTNTKVDRVFKIFSLKLKIENDIVLCVGNEIITSSGGKEIMKVCNEKLQLKQSDLKS- 1074
Query: 288 SEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLK 343
LA SG E+ + I S Q+L+R IE I P+ + KLK
Sbjct: 1075 --ILAGAESG----GESEILINSLE-QQLLRLIEEYPLPLGPKSID--PIKQLKLK 1121
Score = 38 (18.4 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 92 ENLLRNSFYQFQADHAIPDLEKQAKVLEEERDSMVIEEEDSLKNYYNLLQQYKSLKKDVR 151
EN+ + Q Q ++Q + ++E++ EEE+ + Y L K L++++
Sbjct: 259 ENINKQDNKQQQQQQQQQQQQQQQQQQQQEKEK---EEEEEVNLRYTL----KDLEREIE 311
Query: 152 D 152
+
Sbjct: 312 E 312
>UNIPROTKB|Q10701 [details] [associations]
symbol:helY "Probable helicase HelY" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
Length = 906
Score = 198 (74.8 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 44/112 (39%), Positives = 65/112 (58%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPSTAKM 60
MPA+TVV + KF+G++ ++ GEY Q++GRAGRRGID G +++ ++EPS
Sbjct: 379 MPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAG 438
Query: 61 MLKGSADSLNSAFHLSYNMLLNQI-RCEEGSPENLLRNSFYQFQADHAIPDL 111
+ L S+F SYNM +N + R LL SF Q+QAD ++ L
Sbjct: 439 LASTRTFPLRSSFAPSYNMTINLVHRMGPQQAHRLLEQSFAQYQADRSVVGL 490
Score = 115 (45.5 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 58/303 (19%), Positives = 124/303 (40%)
Query: 268 LPMPKDLLPLQTRENMLKSTSEFLARNASGLPLDPEANMGIRSSSYQKLVRRIEALESLF 327
+ +PK + Q R + + + L A+GL + P A + + +E+
Sbjct: 608 MTLPKRVEHRQPR--VRRDLASALRSAAAGLVI-PAARRVSEAGGFHD--PELESSREQL 662
Query: 328 DKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTE-LAFKDELKARKRVLRRL-- 384
+H + SP +E +++ + ++R++ ++T LA + R
Sbjct: 663 RRHPVHTSPGLEDQIRQAERYLRIERDNAQLERKVAAATNSLARTFDRFVGLLTEREFID 722
Query: 385 GYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQDA 444
G AT D VV G++ I S +L + E + G + +K E+ ++S V++ + D
Sbjct: 723 GPAT-DPVVTDDGRLLARIYSESDLLVAECLRTGAWEGLKPAELAGVVSAVVYETRGGDG 781
Query: 445 SKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPD--IMEAVYAWAKGSKF 502
++ +L+ + +++ + S PD + +Y W++
Sbjct: 782 QGAPFGADVPTPRLRQALTQTSRLSTTLRADEQAHRITPSREPDDGFVRVIYRWSRTGDL 841
Query: 503 YEIMEI-------TPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEEAVSKIKR 555
+ +P+ G +R R++ ++L Q+ AA + EL A + A+ I+R
Sbjct: 842 AAALAAADVNGSGSPLLAGDFVRWCRQVLDLLDQVRNAAPN---PELRATAKRAIGDIRR 898
Query: 556 DIV 558
+V
Sbjct: 899 GVV 901
>UNIPROTKB|H7C4L3 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] InterPro:IPR012961 Pfam:PF08148
GO:GO:0005524 EMBL:AL645922 GO:GO:0016818 HGNC:HGNC:10898
ChiTaRS:SKIV2L ProteinModelPortal:H7C4L3 PRIDE:H7C4L3
Ensembl:ENST00000491994 Uniprot:H7C4L3
Length = 182
Score = 212 (79.7 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 56/177 (31%), Positives = 88/177 (49%)
Query: 323 LESLFDKHEISKSPLIEQKLKVLHMKQELTAKIKSIKRQMRSSTELAFKDELKARKRVLR 382
LE L + SP + L + ++ +++ + R + S L E R VLR
Sbjct: 4 LEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERL-RFLLSDQSLLLLPEYHQRVEVLR 62
Query: 383 RLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVLKDVKVEEMVSLLSCFVWQEKLQ 442
LGY V+L G+VAC +SS EL LTEL+F+ L ++ EE+ +LLS V Q
Sbjct: 63 TLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGD 121
Query: 443 DASKPREELELLFTQLQDTARRVAKVQLECKVQIDVEGFVNSFRPDIMEAVYAWAKG 499
+ L+ +++ A+R+ +VQ+ C + VE FV ++E VY WA+G
Sbjct: 122 AGDQLPNTLKQGIERVRAVAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARG 178
>UNIPROTKB|H0YAC4 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR012961
Pfam:PF08148 GO:GO:0005524 GO:GO:0016818 HGNC:HGNC:18734
ChiTaRS:SKIV2L2 EMBL:AC010480 EMBL:AC020728 Ensembl:ENST00000508716
Uniprot:H0YAC4
Length = 72
Score = 180 (68.4 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 489 IMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQLILAAKSIGETELEAKFEE 548
+M+ VY WA G+ F I ++T VFEGS+IR +RRLEE+L+Q+ AAK+IG TELE KF E
Sbjct: 2 LMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAE 61
>TAIR|locus:2020573 [details] [associations]
symbol:EMB25 "EMBRYO DEFECTIVE 25" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0010497 "plasmodesmata-mediated intercellular
transport" evidence=NAS;IMP] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0016441 "posttranscriptional gene silencing"
evidence=IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0003676
GO:GO:0009793 GO:GO:0031047 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0008026 EMBL:AC002062
GO:GO:0003724 GO:GO:0010497 eggNOG:COG4581 GO:GO:0016441
HOGENOM:HOG000245391 EMBL:AK316759 EMBL:AF387007 IPI:IPI00538730
PIR:D96723 RefSeq:NP_177164.1 UniGene:At.35348
ProteinModelPortal:B9DFG3 SMR:B9DFG3 PaxDb:B9DFG3 PRIDE:B9DFG3
EnsemblPlants:AT1G70070.1 GeneID:843343 KEGG:ath:AT1G70070
GeneFarm:2280 TAIR:At1g70070 InParanoid:Q94EZ6 OMA:PSYGMVL
PhylomeDB:B9DFG3 ProtClustDB:CLSN2682754 Genevestigator:B9DFG3
Uniprot:B9DFG3
Length = 1171
Score = 130 (50.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 1 MPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDDKMEPST--A 58
MPA+T V +++ K G++ + E QM+GRAGRRGIDE+G +L V E +
Sbjct: 537 MPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRGIDEKGYTVL-VQTAFEGAEECC 595
Query: 59 KMMLKGSADSLNSAFHLSYNMLLNQI 84
K++ G L S F SY M+LN +
Sbjct: 596 KLVFAG-VKPLVSQFTASYGMVLNLV 620
Score = 89 (36.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 50/238 (21%), Positives = 93/238 (39%)
Query: 310 SSSYQKLVRRIEALESLFD--KHEISKSPLIEQKLKVLHMKQELTAKIKSIK-RQMRSST 366
S Y ++ + S K ++S+S + K+L K+K +K R R
Sbjct: 909 SEEYDNAAQKYKEQRSKISRLKKKMSRSEGFREYKKILENANLTVEKMKRLKARSRRLIN 968
Query: 367 EL------AFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELIFNGVL 420
L +KD ++ + + ++ G+ A I EL L ++ N L
Sbjct: 969 RLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPLGETAAAIRGENELWLAMVLRNKAL 1028
Query: 421 KDVKVEEMVSLLSCFV--------WQEKLQDASKPREELELLFTQLQDTARRVAKVQLEC 472
D+K ++ + + V W++ +P + + + L+D + K+Q +
Sbjct: 1029 VDLKPPQLAGVCASLVSEGIKVRPWRDN-NYIYEPSDTVVDMVNFLEDQRSSLIKLQEKH 1087
Query: 473 KVQIDVEGFVNSFRPDIMEAVYAWAKGSKFYEIMEITPVFEGSLIRAIRRLEEVLQQL 530
+V I V AWA G + E+M + EG L R +RR ++L Q+
Sbjct: 1088 EVMIPC-----CLDVQFSGMVEAWASGLSWKEMMMECAMDEGDLARLLRRTIDLLAQI 1140
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 356 KSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTL 411
KS + S+ +A K EL + L SD+ ++ K + +E+T+
Sbjct: 653 KSFGNYVSSNVTVAAKQELAEIDNKIEILSSEISDEAIDKKSRKLLSARDYKEITV 708
>UNIPROTKB|H9L343 [details] [associations]
symbol:H9L343 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0055087 "Ski complex" evidence=IEA]
InterPro:IPR025696 Pfam:PF13234 GeneTree:ENSGT00690000102154
EMBL:AADN02042840 Ensembl:ENSGALT00000036117 OMA:LLSCHEL
Uniprot:H9L343
Length = 131
Score = 124 (48.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 37/125 (29%), Positives = 56/125 (44%)
Query: 297 GLPL-DPEANMGIRSSSYQKLVRRIEALESLFDKHEISKSPLIEQKLKVLHMKQELTAKI 355
GLPL DP + +R + R +L + P Q ++ L A++
Sbjct: 8 GLPLLDPVGALQLRDPPAVEAAARARSLGAALGGFRCVHGPRFPQLYSQFAARRRLQAQV 67
Query: 356 KSIKRQMRSSTELAFKDELKARKRVLRRLGYATSDDVVELKGKVACEISSAEELTLTELI 415
+ ++ ++ S L E + R VLR LGY V+L G+VA + S EL LTEL+
Sbjct: 68 EQLQYEL-SDRSLLLLPEYRQRLGVLRALGYVADGGAVQLPGRVAA-LLSCHELLLTELL 125
Query: 416 FNGVL 420
VL
Sbjct: 126 LGNVL 130
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 565 565 0.00078 120 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 611 (65 KB)
Total size of DFA: 285 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.63u 0.10s 61.73t Elapsed: 00:00:03
Total cpu time: 61.65u 0.10s 61.75t Elapsed: 00:00:03
Start: Tue May 21 06:51:36 2013 End: Tue May 21 06:51:39 2013